BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041384
(580 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O65543|PP343_ARATH Pentatricopeptide repeat-containing protein At4g31070,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E7 PE=2
SV=2
Length = 624
Score = 601 bits (1549), Expect = e-171, Method: Compositional matrix adjust.
Identities = 300/582 (51%), Positives = 420/582 (72%), Gaps = 5/582 (0%)
Query: 1 MVSKHFYEQTLHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSD 60
+VS FY++ L LYK ++H G TAILPSVIKACA+ Q G QLHC LK+G+D
Sbjct: 31 LVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGAD 90
Query: 61 ADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREM 120
D V+SNSLISMYAKFS+ + ++FDEM +RDT+S+ SIIN Q+G ++++ +EM
Sbjct: 91 CDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEM 150
Query: 121 YLCGFVLKAELLAGIISLCSQIGEL-ELGRQIHALVIVDGSFELSVFVSTALLDLYSKCH 179
Y GF+ K+EL+A +++LC+++G ++ R HALV+VD + SV +STAL+D+Y K
Sbjct: 151 YFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFD 210
Query: 180 HWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLL 239
A VF+QM ++NEVSWTAMISGC+ +QNY+ G+DLFRAMQRE ++P RVTL VL
Sbjct: 211 DHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLP 270
Query: 240 ACAELRDLRN-GKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDV 298
AC EL + K IHG+++ G D L+AA M MYC C + +R++FE +KV+DV
Sbjct: 271 ACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGN-VSLSRVLFETSKVRDV 329
Query: 299 VIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCY 358
V+WSS+I GY+++GD SE M L ++MR E IE NSVTLLAI+S+CT + LS VH
Sbjct: 330 VMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQ 389
Query: 359 IMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEA 418
I+K G + +GNAL++MY+KCGS++++ ++F E+ +D VSW+++I+ YG HG+G EA
Sbjct: 390 ILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEA 449
Query: 419 LQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVD 478
L++F M + G E D + LAILSACNHAGLV+EA+T+F K + + +EHYACY++
Sbjct: 450 LEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGK-YHMPVTLEHYACYIN 508
Query: 479 LLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVA-EMLAHQLIEAEPENAA 537
LLG+ GKI+DA +V MPMKPS RI SSL+SAC HGRL+VA +++A++L+++EP+N A
Sbjct: 509 LLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPA 568
Query: 538 NYTLLSMVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIENE 579
NY LLS + +ESGN+ AEEV RVM+ + L+K YGFS+IE E
Sbjct: 569 NYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPE 610
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/572 (35%), Positives = 331/572 (57%), Gaps = 5/572 (0%)
Query: 7 YEQTLHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVIS 66
+ ++ L+K+ + SG+ ++ V K+ + ++ H G QLH LKSG +
Sbjct: 176 FSGSIGLFKK-MMSSGVEMDSYTFSCVSKSFSSLRS-VHGGEQLHGFILKSGFGERNSVG 233
Query: 67 NSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFV 126
NSL++ Y K + +SA ++FDEM RD ISWNSIIN + NG + L +F +M + G
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 127 LKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALR 186
+ + + + C+ + LGR +H+ + V F LLD+YSKC A
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHS-IGVKACFSREDRFCNTLLDMYSKCGDLDSAKA 352
Query: 187 VFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRD 246
VF +M R+ VS+T+MI+G + LF M+ EG+ P T+T VL CA R
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 247 LRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIR 306
L GK +H + FD +S ALM MY +C ++ A ++F +VKD++ W++II
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG-SMQEAELVFSEMRVKDIISWNTIIG 471
Query: 307 GYSQSGDLSEAMKLFSRMRLE-RIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLN 365
GYS++ +EA+ LF+ + E R P+ T+ +L +C S G +H YIM+ G
Sbjct: 472 GYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYF 531
Query: 366 FDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEM 425
D + N+L++MY+KCG++ +H +F+++A++D VSWT +I+GYG HG+G+EA+ LF +M
Sbjct: 532 SDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM 591
Query: 426 QESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGK 485
+++G+E D I+ +++L AC+H+GLV E FN + E KI +EHYAC VD+L ++G
Sbjct: 592 RQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGD 651
Query: 486 IEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMV 545
+ A + + MP+ P I +L+ CRIH +++AE +A ++ E EPEN Y L++ +
Sbjct: 652 LIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANI 711
Query: 546 CSESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
+E+ W + + + + +GL K+ G S IE
Sbjct: 712 YAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743
Score = 215 bits (548), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 152/540 (28%), Positives = 266/540 (49%), Gaps = 15/540 (2%)
Query: 30 LPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEM 89
L SV++ CA +++ + G ++ +G D + + L MY + A ++FDE+
Sbjct: 97 LCSVLQLCADSKSLKD-GKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 90 PYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGR 149
+ WN ++N ++G + S+ +F++M G + + + + S + + G
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 150 QIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDS 209
Q+H ++ G E + V +L+ Y K A +VF++M R+ +SW ++I+G + +
Sbjct: 216 QLHGFILKSGFGERNS-VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 210 QNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLS 269
+ G+ +F M G++ T+ V CA+ R + G+A+H F +
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 270 AALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERI 329
L+ MY +C + L A+ +F + VV ++S+I GY++ G EA+KLF M E I
Sbjct: 335 NTLLDMYSKCGD-LDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 330 EPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQ 389
P+ T+ A+L+ C R L G VH +I + L FD+ + NALM+MY+KCGS+ +
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 390 IFNEMAARDFVSWTTLISGYGFHGYGEEALQLF-LEMQESGVEPDAITVLAILSACNHAG 448
+F+EM +D +SW T+I GY + Y EAL LF L ++E PD TV +L AC
Sbjct: 454 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 513
Query: 449 LVKEAETLFNNVMKEKKIALAIEHYA-CYVDLLGKSGKIEDACKVVSTMPMKPSTRILSS 507
+ + +M+ + H A VD+ K G + A + + K +
Sbjct: 514 AFDKGREIHGYIMRNG--YFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS-WTV 570
Query: 508 LVSACRIHGRLEVAEMLAHQLIEAEPE-NAANYTLLSMVCSESGNWLGAEEVWR---VMR 563
+++ +HG + A L +Q+ +A E + ++ L CS SG +E WR +MR
Sbjct: 571 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGL---VDEGWRFFNIMR 627
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 134/248 (54%), Gaps = 13/248 (5%)
Query: 208 DSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHH 267
+S N + + L + + P TL VL CA+ + L++GK + + GF D +
Sbjct: 73 ESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSN 130
Query: 268 LSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLE 327
L + L MY C + L A +F+ K++ + W+ ++ ++SGD S ++ LF +M
Sbjct: 131 LGSKLSLMYTNCGD-LKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSS 189
Query: 328 RIEPNSVTLLAILSSCTRQSFLS-----HGLGVHCYIMKAGLNFDVSIGNALMNMYSKCG 382
+E +S T SC +SF S G +H +I+K+G S+GN+L+ Y K
Sbjct: 190 GVEMDSYTF-----SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQ 244
Query: 383 SITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILS 442
+ S+ ++F+EM RD +SW ++I+GY +G E+ L +F++M SG+E D T++++ +
Sbjct: 245 RVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFA 304
Query: 443 ACNHAGLV 450
C + L+
Sbjct: 305 GCADSRLI 312
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/573 (36%), Positives = 345/573 (60%), Gaps = 6/573 (1%)
Query: 7 YEQTLHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVIS 66
+ TL ++K+ L+ S ++ P+VIKA A + G +H +KSG D V++
Sbjct: 87 FHDTLEVFKRLLNCSICVPDSFTFPNVIKAYG-ALGREFLGRMIHTLVVKSGYVCDVVVA 145
Query: 67 NSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFV 126
+SL+ MYAKF+ E++ Q+FDEMP RD SWN++I+CF Q+G ++LE+F M GF
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE 205
Query: 127 LKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALR 186
+ L IS CS++ LE G++IH + G FEL +V++AL+D+Y KC +A
Sbjct: 206 PNSVSLTVAISACSRLLWLERGKEIHRKCVKKG-FELDEYVNSALVDMYGKCDCLEVARE 264
Query: 187 VFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRD 246
VF++M ++ V+W +MI G + + + +++ M EG +P++ TLT +L+AC+ R+
Sbjct: 265 VFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRN 324
Query: 247 LRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVV-IWSSII 305
L +GK IHGY + D +++ +L+ +Y +C EA + A +F +T+ KDV W+ +I
Sbjct: 325 LLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA-NLAETVFSKTQ-KDVAESWNVMI 382
Query: 306 RGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLN 365
Y G+ +A++++ +M ++P+ VT ++L +C++ + L G +H I ++ L
Sbjct: 383 SSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLE 442
Query: 366 FDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEM 425
D + +AL++MYSKCG+ + +IFN + +D VSWT +IS YG HG EAL F EM
Sbjct: 443 TDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEM 502
Query: 426 QESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGK 485
Q+ G++PD +T+LA+LSAC HAGL+ E F+ + + I IEHY+C +D+LG++G+
Sbjct: 503 QKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGR 562
Query: 486 IEDACKVVSTMP-MKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSM 544
+ +A +++ P + +LS+L SAC +H + + +A L+E P++A+ Y +L
Sbjct: 563 LLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFN 622
Query: 545 VCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
+ + +W A V M+ GL K G S IE
Sbjct: 623 LYASGESWDAARRVRLKMKEMGLRKKPGCSWIE 655
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 151/555 (27%), Positives = 283/555 (50%), Gaps = 14/555 (2%)
Query: 30 LPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEM 89
L S+++ C + +H L G D V+ SLI++Y SA +F+
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 90 PYR-DTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAEL-LAGIISLCSQIGELEL 147
R D WNS+++ +++N + +LE+F+ + C + +I +G L
Sbjct: 66 DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFL 125
Query: 148 GRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCI 207
GR IH LV+ G + V V+++L+ +Y+K + + +L+VF++M R+ SW +IS
Sbjct: 126 GRMIHTLVVKSG-YVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 208 DSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHH 267
S + ++LF M+ G +P V+LT+ + AC+ L L GK IH GF+ D +
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 268 LSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLE 327
+++AL+ MY +C + L AR +F++ K +V W+S+I+GY GD +++ +RM +E
Sbjct: 245 VNSALVDMYGKC-DCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE 303
Query: 328 RIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSS 387
P+ TL +IL +C+R L HG +H Y++++ +N D+ + +L+++Y KCG +
Sbjct: 304 GTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLA 363
Query: 388 HQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHA 447
+F++ SW +IS Y G +A++++ +M GV+PD +T ++L AC+
Sbjct: 364 ETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQL 423
Query: 448 GLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSS 507
+++ + + ++ E ++ + +D+ K G ++A ++ +++P K +
Sbjct: 424 AALEKGKQIHLSI-SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS-WTV 481
Query: 508 LVSACRIHG--RLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNWLGAEEVWRVMRAK 565
++SA HG R + + Q +P+ +LS C +G + + MR+K
Sbjct: 482 MISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLS-ACGHAGLIDEGLKFFSQMRSK 540
Query: 566 GLSKSYGFSRIENEY 580
YG I Y
Sbjct: 541 -----YGIEPIIEHY 550
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 363 bits (931), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 197/551 (35%), Positives = 314/551 (56%), Gaps = 7/551 (1%)
Query: 31 PSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMP 90
P V KA ++ + GL +H L+S D + N+L++MY F K E A +FD M
Sbjct: 121 PFVAKAAGELKSMK-LGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMK 179
Query: 91 YRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQ 150
RD ISWN++I+ + +NG+ +L MF M L + ++ +C + +LE+GR
Sbjct: 180 NRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRN 239
Query: 151 IHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQ 210
+H LV + + V AL+++Y KC A VF++M R+ ++WT MI+G +
Sbjct: 240 VHKLV-EEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDG 298
Query: 211 NYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSA 270
+ + ++L R MQ EGV+P VT+ ++ C + + +GK +HG+A D +
Sbjct: 299 DVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIET 358
Query: 271 ALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIE 330
+L+ MY +C R+ F WS+II G Q+ +S+A+ LF RMR E +E
Sbjct: 359 SLISMYAKCKRVDLCFRV-FSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVE 417
Query: 331 PNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQI 390
PN TL ++L + + L + +HCY+ K G + L+++YSKCG++ S+H+I
Sbjct: 418 PNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKI 477
Query: 391 FNEM----AARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNH 446
FN + ++D V W LISGYG HG G ALQ+F+EM SGV P+ IT + L+AC+H
Sbjct: 478 FNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSH 537
Query: 447 AGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILS 506
+GLV+E TLF +++ K HY C VDLLG++G++++A +++T+P +P++ +
Sbjct: 538 SGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWG 597
Query: 507 SLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNWLGAEEVWRVMRAKG 566
+L++AC H +++ EM A++L E EPEN NY LL+ + + G W E+V +M G
Sbjct: 598 ALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVG 657
Query: 567 LSKSYGFSRIE 577
L K G S IE
Sbjct: 658 LRKKPGHSTIE 668
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 130/516 (25%), Positives = 244/516 (47%), Gaps = 28/516 (5%)
Query: 50 LHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGF 109
LHC + G + ++S +L YA A +LF+EMP +S+N +I + + G
Sbjct: 37 LHCHVITGGRVSGHILS-TLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGL 95
Query: 110 YVRSLEMFREM-----------YLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVD 158
Y ++ +F M Y FV KA ++ ++LG +H I+
Sbjct: 96 YHDAISVFIRMVSEGVKCVPDGYTYPFVAKA---------AGELKSMKLGLVVHGR-ILR 145
Query: 159 GSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDL 218
F +V ALL +Y +A VF+ M R+ +SW MISG + + + +
Sbjct: 146 SWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMM 205
Query: 219 FRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCE 278
F M E V T+ +L C L+DL G+ +H + AL++MY +
Sbjct: 206 FDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLK 265
Query: 279 CTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLA 338
C + AR +F+R + +DV+ W+ +I GY++ GD+ A++L M+ E + PN+VT+ +
Sbjct: 266 CGR-MDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIAS 324
Query: 339 ILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARD 398
++S C ++ G +H + ++ + D+ I +L++MY+KC + ++F+ +
Sbjct: 325 LVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYH 384
Query: 399 FVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFN 458
W+ +I+G + +AL LF M+ VEP+ T+ ++L A +++A +
Sbjct: 385 TGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHC 444
Query: 459 NVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTR---ILSSLVSACRIH 515
+ K ++ +++ V + K G +E A K+ + + K ++ + +L+S +H
Sbjct: 445 YLTKTGFMS-SLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
Query: 516 GRLEVAEMLAHQLIEAE-PENAANYTLLSMVCSESG 550
G A + +++ + N +T CS SG
Sbjct: 504 GDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSG 539
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 15/315 (4%)
Query: 242 AELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIW 301
A + + KA+H + G H+ + L Y C + AR +FE ++ +
Sbjct: 26 AATQSISKTKALHCHVITGG-RVSGHILSTLSVTYALCGHITY-ARKLFEEMPQSSLLSY 83
Query: 302 SSIIRGYSQSGDLSEAMKLFSRMRLERIE--PNSVTLLAILSSCTRQSFLSHGLGVHCYI 359
+ +IR Y + G +A+ +F RM E ++ P+ T + + + GL VH I
Sbjct: 84 NIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRI 143
Query: 360 MKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEAL 419
+++ D + NAL+ MY G + + +F+ M RD +SW T+ISGY +GY +AL
Sbjct: 144 LRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDAL 203
Query: 420 QLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFN--NVMKEKKIALAIEHYACYV 477
+F M V+ D T++++L C H +K+ E N +++EK++ IE V
Sbjct: 204 MMFDWMVNESVDLDHATIVSMLPVCGH---LKDLEMGRNVHKLVEEKRLGDKIEVKNALV 260
Query: 478 DLLGKSGKIEDACKVVSTMPMKPS---TRILSSLVSACRIHGRLEVAEMLAHQLIEAEPE 534
++ K G++++A V M + T +++ + LE+ ++ E
Sbjct: 261 NMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQ---FEGVRP 317
Query: 535 NAANYTLLSMVCSES 549
NA L VC ++
Sbjct: 318 NAVTIASLVSVCGDA 332
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 358 bits (920), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 196/554 (35%), Positives = 315/554 (56%), Gaps = 7/554 (1%)
Query: 30 LPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEM 89
L S+++ C G Q+HC LKSGS + + SN LI MY K +P AY++FD M
Sbjct: 9 LVSILRVCTRKGLSDQGG-QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 90 PYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGR 149
P R+ +SW+++++ NG SL +F EM G + + C + LE G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 150 QIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDS 209
QIH + G FE+ V V +L+D+YSKC A +VF ++V R+ +SW AMI+G + +
Sbjct: 128 QIHGFCLKIG-FEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186
Query: 210 QNYDTGIDLFRAMQREGVK--PTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGF--DFD 265
+D F MQ +K P TLT +L AC+ + GK IHG+ GF
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 266 HHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMR 325
++ +L+ +Y +C L AR F++ K K ++ WSS+I GY+Q G+ EAM LF R++
Sbjct: 247 ATITGSLVDLYVKCG-YLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ 305
Query: 326 LERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSIT 385
+ +S L +I+ + L G + +K + S+ N++++MY KCG +
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVD 365
Query: 386 SSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACN 445
+ + F EM +D +SWT +I+GYG HG G++++++F EM +EPD + LA+LSAC+
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS 425
Query: 446 HAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRIL 505
H+G++KE E LF+ +++ I +EHYAC VDLLG++G++++A ++ TMP+KP+ I
Sbjct: 426 HSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIW 485
Query: 506 SSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNWLGAEEVWRVMRAK 565
+L+S CR+HG +E+ + + L+ + +N ANY ++S + ++G W + K
Sbjct: 486 QTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIK 545
Query: 566 GLSKSYGFSRIENE 579
GL K G S +E E
Sbjct: 546 GLKKEAGMSWVEIE 559
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 120/226 (53%), Gaps = 3/226 (1%)
Query: 227 VKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPA 286
+ R L +L C G +H Y G + S L+ MYC+C E L
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 287 RIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQ 346
+ +F+ ++VV WS+++ G+ +GDL ++ LFS M + I PN T L +C
Sbjct: 62 K-VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 347 SFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLI 406
+ L GL +H + +K G V +GN+L++MYSKCG I + ++F + R +SW +I
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
Query: 407 SGYGFHGYGEEALQLFLEMQESGVE--PDAITVLAILSACNHAGLV 450
+G+ GYG +AL F MQE+ ++ PD T+ ++L AC+ G++
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMI 226
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 352 bits (903), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 199/622 (31%), Positives = 329/622 (52%), Gaps = 69/622 (11%)
Query: 24 YSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAY 83
+++++ ++ +C ++ + +H + +KSG + I N LI Y+K E
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR 75
Query: 84 QLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREM----------------------- 120
Q+FD+MP R+ +WNS++ T+ GF + +FR M
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 121 YLC--------GFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALL 172
LC GFVL A ++S CS + ++ G Q+H+L I F V++ +AL+
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSL-IAKSPFLSDVYIGSALV 194
Query: 173 DLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRV 232
D+YSKC + A RVF++M RN VSW ++I+ + +D+F+ M V+P V
Sbjct: 195 DMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEV 254
Query: 233 TLTIVLLACAELRDLRNGKAIHGYAYCCG-FDFDHHLSAALMHMYCECTE---------- 281
TL V+ ACA L ++ G+ +HG D LS A + MY +C+
Sbjct: 255 TLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDS 314
Query: 282 --------------------ALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLF 321
+ AR++F + ++VV W+++I GY+Q+G+ EA+ LF
Sbjct: 315 MPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLF 374
Query: 322 SRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNF------DVSIGNALM 375
++ E + P + IL +C + L G+ H +++K G F D+ +GN+L+
Sbjct: 375 CLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLI 434
Query: 376 NMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAI 435
+MY KCG + + +F +M RD VSW +I G+ +GYG EAL+LF EM ESG +PD I
Sbjct: 435 DMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHI 494
Query: 436 TVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVST 495
T++ +LSAC HAG V+E F+++ ++ +A +HY C VDLLG++G +E+A ++
Sbjct: 495 TMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEE 554
Query: 496 MPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNWLGA 555
MPM+P + I SL++AC++H + + + +A +L+E EP N+ Y LLS + +E G W
Sbjct: 555 MPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDV 614
Query: 556 EEVWRVMRAKGLSKSYGFSRIE 577
V + MR +G++K G S I+
Sbjct: 615 MNVRKSMRKEGVTKQPGCSWIK 636
Score = 182 bits (461), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 138/526 (26%), Positives = 241/526 (45%), Gaps = 80/526 (15%)
Query: 18 LHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFS 77
+H G N SV+ AC+ + G+Q+H KS +D I ++L+ MY+K
Sbjct: 143 MHKEGFVLNEYSFASVLSACS-GLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201
Query: 78 KPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIIS 137
A ++FDEM R+ +SWNS+I CF QNG V +L++F+ M LA +IS
Sbjct: 202 NVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVIS 261
Query: 138 LCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVI---- 193
C+ + +++G+++H V+ + + +S A +D+Y+KC A +F+ M I
Sbjct: 262 ACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVI 321
Query: 194 ---------------------------RNEVSWTAMISGCIDSQNYDTGIDLFRAMQREG 226
RN VSW A+I+G + + + LF ++RE
Sbjct: 322 AETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRES 381
Query: 227 VKPTRVTLTIVLLACAELRDLRNGKAI------HGYAYCCGFDFDHHLSAALMHMYCECT 280
V PT + +L ACA+L +L G HG+ + G + D + +L+ MY +C
Sbjct: 382 VCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCG 441
Query: 281 EALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAIL 340
+ ++F + +D V W+++I G++Q+G +EA++LF M +P+ +T++ +L
Sbjct: 442 -CVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVL 500
Query: 341 SSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFV 400
S+C F+ G H + +S + F RD
Sbjct: 501 SACGHAGFVEEGR--HYF--------------------------SSMTRDFGVAPLRDH- 531
Query: 401 SWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNV 460
+T ++ G G+ EEA + EM ++PD++ ++L+AC V TL
Sbjct: 532 -YTCMVDLLGRAGFLEEAKSMIEEMP---MQPDSVIWGSLLAACK----VHRNITL-GKY 582
Query: 461 MKEKKIALAIEHYACYV---DLLGKSGKIEDACKVVSTMPMKPSTR 503
+ EK + + + YV ++ + GK ED V +M + T+
Sbjct: 583 VAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTK 628
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 351 bits (901), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 185/548 (33%), Positives = 320/548 (58%), Gaps = 9/548 (1%)
Query: 33 VIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYR 92
++K C + G ++H +KSG D L +MYAK + A ++FD MP R
Sbjct: 141 LLKVCG-DEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER 199
Query: 93 DTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELEL---GR 149
D +SWN+I+ ++QNG +LEM + M C LK + I+S+ + L L G+
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSM--CEENLKPSFIT-IVSVLPAVSALRLISVGK 256
Query: 150 QIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDS 209
+IH + G F+ V +STAL+D+Y+KC A ++F+ M+ RN VSW +MI + +
Sbjct: 257 EIHGYAMRSG-FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315
Query: 210 QNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLS 269
+N + +F+ M EGVKPT V++ L ACA+L DL G+ IH + G D + +
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV 375
Query: 270 AALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERI 329
+L+ MYC+C E + A +F + + + +V W+++I G++Q+G +A+ FS+MR +
Sbjct: 376 NSLISMYCKCKE-VDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Query: 330 EPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQ 389
+P++ T ++++++ S H +H +M++ L+ +V + AL++MY+KCG+I +
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARL 494
Query: 390 IFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGL 449
IF+ M+ R +W +I GYG HG+G+ AL+LF EMQ+ ++P+ +T L+++SAC+H+GL
Sbjct: 495 IFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGL 554
Query: 450 VKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLV 509
V+ F + + I L+++HY VDLLG++G++ +A + MP+KP+ + +++
Sbjct: 555 VEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAML 614
Query: 510 SACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNWLGAEEVWRVMRAKGLSK 569
AC+IH + AE A +L E P++ + LL+ + + W +V M +GL K
Sbjct: 615 GACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRK 674
Query: 570 SYGFSRIE 577
+ G S +E
Sbjct: 675 TPGCSMVE 682
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/538 (26%), Positives = 273/538 (50%), Gaps = 23/538 (4%)
Query: 20 PSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKP 79
P+ +Y + A L +++ C+ + + Q+ K+G + L+S++ ++
Sbjct: 32 PANVYEHPAAL--LLERCSSLKELR----QILPLVFKNGLYQEHFFQTKLVSLFCRYGSV 85
Query: 80 ESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLC 139
+ A ++F+ + + + +++++ F + ++L+ F M ++ +C
Sbjct: 86 DEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVC 145
Query: 140 SQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSW 199
EL +G++IH L++ G F L +F T L ++Y+KC A +VF++M R+ VSW
Sbjct: 146 GDEAELRVGKEIHGLLVKSG-FSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSW 204
Query: 200 TAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYC 259
+++G + +++ ++M E +KP+ +T+ VL A + LR + GK IHGYA
Sbjct: 205 NTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMR 264
Query: 260 CGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMK 319
GFD ++S AL+ MY +C +L AR +F+ ++VV W+S+I Y Q+ + EAM
Sbjct: 265 SGFDSLVNISTALVDMYAKCG-SLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAML 323
Query: 320 LFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYS 379
+F +M E ++P V+++ L +C L G +H ++ GL+ +VS+ N+L++MY
Sbjct: 324 IFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYC 383
Query: 380 KCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLA 439
KC + ++ +F ++ +R VSW +I G+ +G +AL F +M+ V+PD T ++
Sbjct: 384 KCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVS 443
Query: 440 ILSACNHAGLVKEAETLFNNVMK---EKKIALAIEHYACYVDLLGKSGKIEDACKVVSTM 496
+++A + A+ + VM+ +K + + VD+ K G I A + M
Sbjct: 444 VITAIAELSITHHAKWIHGVVMRSCLDKNVFVT----TALVDMYAKCGAIMIARLIFDMM 499
Query: 497 PMKPSTRILSSLVSACRIHG----RLEVAEMLAHQLIEAEPENAANYTLLSMVCSESG 550
+ T ++++ HG LE+ E + I+ N + + CS SG
Sbjct: 500 SERHVT-TWNAMIDGYGTHGFGKAALELFEEMQKGTIKP---NGVTFLSVISACSHSG 553
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 346 bits (887), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 182/533 (34%), Positives = 305/533 (57%), Gaps = 8/533 (1%)
Query: 47 GLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQ 106
GLQ+H +K+G D +SNSLI++Y K A LFD+ + ++WNS+I+ +
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 107 NGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVF 166
NG + +L MF M L L A +I LC+ + EL Q+H V+ G F
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG-FLFDQN 331
Query: 167 VSTALLDLYSKCHHWLIALRVFEQM-VIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQRE 225
+ TAL+ YSKC L ALR+F+++ + N VSWTAMISG + + + +DLF M+R+
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 226 GVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHP 285
GV+P T +++L A + + +H ++ + AL+ Y + +
Sbjct: 392 GVRPNEFTYSVILTALPVI----SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 286 ARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCT- 344
A++ F KD+V WS+++ GY+Q+G+ A+K+F + I+PN T +IL+ C
Sbjct: 448 AKV-FSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAA 506
Query: 345 RQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTT 404
+ + G H + +K+ L+ + + +AL+ MY+K G+I S+ ++F +D VSW +
Sbjct: 507 TNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNS 566
Query: 405 LISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEK 464
+ISGY HG +AL +F EM++ V+ D +T + + +AC HAGLV+E E F+ ++++
Sbjct: 567 MISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDC 626
Query: 465 KIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEML 524
KIA EH +C VDL ++G++E A KV+ MP + I ++++ACR+H + E+ +
Sbjct: 627 KIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLA 686
Query: 525 AHQLIEAEPENAANYTLLSMVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
A ++I +PE++A Y LLS + +ESG+W +V ++M + + K G+S IE
Sbjct: 687 AEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIE 739
Score = 209 bits (531), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 251/500 (50%), Gaps = 7/500 (1%)
Query: 18 LHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFS 77
+H G+ + +I SV+K A + FG QLHC +K G D + SL+ Y K S
Sbjct: 84 IHRLGMEMDCSIFSSVLKVSA-TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGS 142
Query: 78 KPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIIS 137
+ ++FDEM R+ ++W ++I+ + +N L +F M G + A +
Sbjct: 143 NFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALG 202
Query: 138 LCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEV 197
+ ++ G G Q+H +V+ +G + ++ VS +L++LY KC + A +F++ +++ V
Sbjct: 203 VLAEEGVGGRGLQVHTVVVKNG-LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVV 261
Query: 198 SWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYA 257
+W +MISG + + +F +M+ V+ + + V+ CA L++LR + +H
Sbjct: 262 TWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSV 321
Query: 258 YCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEA 317
GF FD ++ ALM Y +CT L R+ E V +VV W+++I G+ Q+ EA
Sbjct: 322 VKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEA 381
Query: 318 MKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNM 377
+ LFS M+ + + PN T IL++ S VH ++K ++G AL++
Sbjct: 382 VDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDA 437
Query: 378 YSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITV 437
Y K G + + ++F+ + +D V+W+ +++GY G E A+++F E+ + G++P+ T
Sbjct: 438 YVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTF 497
Query: 438 LAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMP 497
+IL+ C F+ + ++ ++ + + + K G IE A +V
Sbjct: 498 SSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR 557
Query: 498 MKPSTRILSSLVSACRIHGR 517
K +S++S HG+
Sbjct: 558 EKDLVS-WNSMISGYAQHGQ 576
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/431 (31%), Positives = 221/431 (51%), Gaps = 22/431 (5%)
Query: 77 SKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGII 136
S+ +A+ LFD+ P RD S+ S++ F+++G + +F ++ G + + + ++
Sbjct: 41 SRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVL 100
Query: 137 SLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNE 196
+ + + + GRQ+H I G F V V T+L+D Y K ++ +VF++M RN
Sbjct: 101 KVSATLCDELFGRQLHCQCIKFG-FLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159
Query: 197 VSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGY 256
V+WT +ISG + D + LF MQ EG +P T L AE G +H
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 219
Query: 257 AYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSE 316
G D +S +L+++Y +C + ARI+F++T+VK VV W+S+I GY+ +G E
Sbjct: 220 VVKNGLDKTIPVSNSLINLYLKCGN-VRKARILFDKTEVKSVVTWNSMISGYAANGLDLE 278
Query: 317 AMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMN 376
A+ +F MRL + + + +++ C L +HC ++K G FD +I ALM
Sbjct: 279 ALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV 338
Query: 377 MYSKCGSITSSHQIFNEMA-ARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAI 435
YSKC ++ + ++F E+ + VSWT +ISG+ + EEA+ LF EM+ GV P+
Sbjct: 339 AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEF 398
Query: 436 TVLAILSACN-------HAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIED 488
T IL+A HA +VK N + + A+ +D K GK+E+
Sbjct: 399 TYSVILTALPVISPSEVHAQVVK------TNYERSSTVGTAL------LDAYVKLGKVEE 446
Query: 489 ACKVVSTMPMK 499
A KV S + K
Sbjct: 447 AAKVFSGIDDK 457
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Query: 17 ELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKF 76
EL G+ N S++ CA G Q H A+KS D+ +S++L++MYAK
Sbjct: 484 ELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKK 543
Query: 77 SKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGII 136
ESA ++F +D +SWNS+I+ + Q+G +++L++F+EM + G+
Sbjct: 544 GNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVF 603
Query: 137 SLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMV-IRN 195
+ C+ G +E G + +++ D + ++ ++DLYS+ A++V E M
Sbjct: 604 AACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAG 663
Query: 196 EVSWTAMISGC 206
W +++ C
Sbjct: 664 STIWRTILAAC 674
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 343 bits (879), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 188/570 (32%), Positives = 316/570 (55%), Gaps = 4/570 (0%)
Query: 8 EQTLHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISN 67
E+ + L+K+ +H GL ++ L S++ AC+ A G QLH K G ++ I
Sbjct: 371 EKAMELFKR-MHLDGLEPDSNTLASLVVACS-ADGTLFRGQQLHAYTTKLGFASNNKIEG 428
Query: 68 SLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVL 127
+L+++YAK + E+A F E + + WN ++ + S +FR+M + V
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 488
Query: 128 KAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRV 187
I+ C ++G+LELG QIH+ +I +F+L+ +V + L+D+Y+K A +
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQIHSQII-KTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 188 FEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDL 247
+ ++ VSWT MI+G D + FR M G++ V LT + ACA L+ L
Sbjct: 548 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 607
Query: 248 RNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRG 307
+ G+ IH A GF D AL+ +Y C + + + + FE+T+ D + W++++ G
Sbjct: 608 KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK-IEESYLAFEQTEAGDNIAWNALVSG 666
Query: 308 YSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFD 367
+ QSG+ EA+++F RM E I+ N+ T + + + + + + G VH I K G + +
Sbjct: 667 FQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSE 726
Query: 368 VSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQE 427
+ NAL++MY+KCGSI+ + + F E++ ++ VSW +I+ Y HG+G EAL F +M
Sbjct: 727 TEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIH 786
Query: 428 SGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIE 487
S V P+ +T++ +LSAC+H GLV + F ++ E ++ EHY C VD+L ++G +
Sbjct: 787 SNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLS 846
Query: 488 DACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCS 547
A + + MP+KP + +L+SAC +H +E+ E AH L+E EPE++A Y LLS + +
Sbjct: 847 RAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYA 906
Query: 548 ESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
S W + + M+ KG+ K G S IE
Sbjct: 907 VSKKWDARDLTRQKMKEKGVKKEPGQSWIE 936
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/475 (28%), Positives = 220/475 (46%), Gaps = 8/475 (1%)
Query: 22 GLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPES 81
G+ N L +++ C G +LH LK G D++ +S L Y
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 82 AYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQ 141
A+++FDEMP R +WN +I +F M +G++ C
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 142 IG-ELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWT 200
++ QIHA ++ G S V L+DLYS+ +A RVF+ + +++ SW
Sbjct: 199 GSVAFDVVEQIHARILYQG-LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 201 AMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCC 260
AMISG ++ I LF M G+ PT + VL AC ++ L G+ +HG
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 261 GFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKL 320
GF D ++ AL+ +Y L A IF +D V ++++I G SQ G +AM+L
Sbjct: 318 GFSSDTYVCNALVSLYFHLGN-LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 321 FSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSK 380
F RM L+ +EP+S TL +++ +C+ L G +H Y K G + I AL+N+Y+K
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 436
Query: 381 CGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAI 440
C I ++ F E + V W ++ YG + ++F +MQ + P+ T +I
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 441 LSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYV--DLLGKSGKIEDACKVV 493
L C G ++ E + + ++K + Y C V D+ K GK++ A ++
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTN---FQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 189/406 (46%), Gaps = 35/406 (8%)
Query: 143 GELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAM 202
G L+ GR++H+ ++ G + + +S L D Y A +VF++M R +W M
Sbjct: 99 GSLDEGRKLHSQILKLG-LDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKM 157
Query: 203 ISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNG-------KAIHG 255
I LF M E V P T + VL AC R G + IH
Sbjct: 158 IKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC------RGGSVAFDVVEQIHA 211
Query: 256 YAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLS 315
G + L+ +Y + AR +F+ ++KD W ++I G S++ +
Sbjct: 212 RILYQGLRDSTVVCNPLIDLYSR-NGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEA 270
Query: 316 EAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALM 375
EA++LF M + I P ++LS+C + L G +H ++K G + D + NAL+
Sbjct: 271 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 330
Query: 376 NMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAI 435
++Y G++ S+ IF+ M+ RD V++ TLI+G GYGE+A++LF M G+EPD+
Sbjct: 331 SLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN 390
Query: 436 TVLAILSACNHAGLVKEAETLFNNVMK-----EKKIALAIEHYACYVDLLGKSGKIEDAC 490
T+ +++ AC+ G + + L K KI A+ ++L K IE A
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL------LNLYAKCADIETAL 444
Query: 491 ---------KVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQ 527
VV M + +L L ++ RI ++++ E++ +Q
Sbjct: 445 DYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 341 bits (874), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 188/565 (33%), Positives = 304/565 (53%), Gaps = 5/565 (0%)
Query: 17 ELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKF 76
++ SG + S++ CA A G Q H +K + + N+L+ MYAK
Sbjct: 418 DMKSSGYNIDDFTFTSLLSTCA-ASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKC 476
Query: 77 SKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGII 136
E A Q+F+ M RD ++WN+II + Q+ + ++F+ M LCG V LA +
Sbjct: 477 GALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTL 536
Query: 137 SLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNE 196
C+ + L G+Q+H L + G + + ++L+D+YSKC A +VF + +
Sbjct: 537 KACTHVHGLYQGKQVHCLSVKCG-LDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSV 595
Query: 197 VSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGY 256
VS A+I+G N + + LF+ M GV P+ +T ++ AC + L G HG
Sbjct: 596 VSMNALIAG-YSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQ 654
Query: 257 AYCCGFDFD-HHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLS 315
GF + +L +L+ MY + E + K +V+W+ ++ G+SQ+G
Sbjct: 655 ITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYE 714
Query: 316 EAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALM 375
EA+K + MR + + P+ T + +L C+ S L G +H I + D N L+
Sbjct: 715 EALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLI 774
Query: 376 NMYSKCGSITSSHQIFNEMAAR-DFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDA 434
+MY+KCG + S Q+F+EM R + VSW +LI+GY +GY E+AL++F M++S + PD
Sbjct: 775 DMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDE 834
Query: 435 ITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVS 494
IT L +L+AC+HAG V + +F ++ + I ++H AC VDLLG+ G +++A +
Sbjct: 835 ITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIE 894
Query: 495 TMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNWLG 554
+KP R+ SSL+ ACRIHG E+ A +LIE EP+N++ Y LLS + + G W
Sbjct: 895 AQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEK 954
Query: 555 AEEVWRVMRAKGLSKSYGFSRIENE 579
A + +VMR +G+ K G+S I+ E
Sbjct: 955 ANALRKVMRDRGVKKVPGYSWIDVE 979
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/551 (26%), Positives = 279/551 (50%), Gaps = 14/551 (2%)
Query: 18 LHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFS 77
+ S + S + L SV+ A + GL +H A+K G ++ + +SL+SMY+K
Sbjct: 318 MRKSSVKSTRSTLGSVLSAIGIV-ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCE 376
Query: 78 KPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIIS 137
K E+A ++F+ + ++ + WN++I + NG + +E+F +M G+ + ++S
Sbjct: 377 KMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLS 436
Query: 138 LCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEV 197
C+ +LE+G Q H+ +I+ ++FV AL+D+Y+KC A ++FE+M R+ V
Sbjct: 437 TCAASHDLEMGSQFHS-IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV 495
Query: 198 SWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYA 257
+W +I + +N DLF+ M G+ L L AC + L GK +H +
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLS 555
Query: 258 YCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEA 317
CG D D H ++L+ MY +C + AR +F VV +++I GYSQ+ +L EA
Sbjct: 556 VKCGLDRDLHTGSSLIDMYSKCG-IIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEA 613
Query: 318 MKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVS-IGNALMN 376
+ LF M + P+ +T I+ +C + L+ G H I K G + + +G +L+
Sbjct: 614 VVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLG 673
Query: 377 MYSKCGSITSSHQIFNEMAA-RDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAI 435
MY +T + +F+E+++ + V WT ++SG+ +G+ EEAL+ + EM+ GV PD
Sbjct: 674 MYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQA 733
Query: 436 TVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYA--CYVDLLGKSGKIEDACKVV 493
T + +L C+ ++E + + + +A ++ +D+ K G ++ + +V
Sbjct: 734 TFVTVLRVCSVLSSLREGRAIHSLIF---HLAHDLDELTSNTLIDMYAKCGDMKGSSQVF 790
Query: 494 STMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAE--PENAANYTLLSMVCSESGN 551
M + + +SL++ +G E A + + ++ P+ +L+ CS +G
Sbjct: 791 DEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLT-ACSHAGK 849
Query: 552 WLGAEEVWRVM 562
+++ +M
Sbjct: 850 VSDGRKIFEMM 860
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 153/495 (30%), Positives = 234/495 (47%), Gaps = 12/495 (2%)
Query: 58 GSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMF 117
G D + ++I+ Y + K + A LF EM D ++WN +I+ + G ++E F
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF 315
Query: 118 REMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSK 177
M L ++S + L+LG +HA I G +++V ++L+ +YSK
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG-LASNIYVGSSLVSMYSK 374
Query: 178 CHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIV 237
C A +VFE + +N+V W AMI G + ++LF M+ G T T +
Sbjct: 375 CEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSL 434
Query: 238 LLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKD 297
L CA DL G H + + AL+ MY +C AL AR IFER +D
Sbjct: 435 LSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG-ALEDARQIFERMCDRD 493
Query: 298 VVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHC 357
V W++II Y Q + SEA LF RM L I + L + L +CT L G VHC
Sbjct: 494 NVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHC 553
Query: 358 YIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEE 417
+K GL+ D+ G++L++MYSKCG I + ++F+ + VS LI+GY + EE
Sbjct: 554 LSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EE 612
Query: 418 ALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYV 477
A+ LF EM GV P IT I+ AC H T F+ + ++ + E+ +
Sbjct: 613 AVVLFQEMLTRGVNPSEITFATIVEAC-HKPESLTLGTQFHGQITKRGFSSEGEYLG--I 669
Query: 478 DLLG---KSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAE-- 532
LLG S + +AC + S + S + + ++S +G E A ++
Sbjct: 670 SLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVL 729
Query: 533 PENAANYTLLSMVCS 547
P+ A T+L VCS
Sbjct: 730 PDQATFVTVLR-VCS 743
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 224/483 (46%), Gaps = 45/483 (9%)
Query: 18 LHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFS 77
L + ++ N V+ CA +T+ FG Q+HC+ +K G + + +L+ MYAK
Sbjct: 151 LFENQIFPNKFTFSIVLSTCA-RETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCD 209
Query: 78 KPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIIS 137
+ A ++F+ + +T+ W + + + + G ++ +F M G +I+
Sbjct: 210 RISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVIN 269
Query: 138 LCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEV 197
++G+L+ R + F +M + V
Sbjct: 270 TYIRLGKLKDARLL------------------------------------FGEMSSPDVV 293
Query: 198 SWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYA 257
+W MISG I+ F M++ VK TR TL VL A + +L G +H A
Sbjct: 294 AWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEA 353
Query: 258 YCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEA 317
G + ++ ++L+ MY +C E + A +FE + K+ V W+++IRGY+ +G+ +
Sbjct: 354 IKLGLASNIYVGSSLVSMYSKC-EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKV 412
Query: 318 MKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNM 377
M+LF M+ + T ++LS+C L G H I+K L ++ +GNAL++M
Sbjct: 413 MELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDM 472
Query: 378 YSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITV 437
Y+KCG++ + QIF M RD V+W T+I Y EA LF M G+ D +
Sbjct: 473 YAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACL 532
Query: 438 LAILSACNHA-GLVKEAETLFNNVMKEKKIALAIEHY--ACYVDLLGKSGKIEDACKVVS 494
+ L AC H GL + + +V K L + + + +D+ K G I+DA KV S
Sbjct: 533 ASTLKACTHVHGLYQGKQVHCLSV----KCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588
Query: 495 TMP 497
++P
Sbjct: 589 SLP 591
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 221/450 (49%), Gaps = 39/450 (8%)
Query: 47 GLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQ 106
G +H +L G D++ + N+++ +YAK ++ A + FD + +D +WNS+++ ++
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSS 137
Query: 107 NGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVF 166
G + L F ++ + ++S C++ +E GRQIH +I G E + +
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG-LERNSY 196
Query: 167 VSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREG 226
AL+D+Y+KC A RVFE +V N V WT + SG + + + + +F M+ EG
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 227 VKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPA 286
+P + V+ L L++ A
Sbjct: 257 HRPDHLAFVTVINTYIRLGKLKD------------------------------------A 280
Query: 287 RIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQ 346
R++F DVV W+ +I G+ + G + A++ F MR ++ TL ++LS+
Sbjct: 281 RLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 347 SFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLI 406
+ L GL VH +K GL ++ +G++L++MYSKC + ++ ++F + ++ V W +I
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 407 SGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKI 466
GY +G + ++LF++M+ SG D T ++LS C A E + F++++ +KK+
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA-ASHDLEMGSQFHSIIIKKKL 459
Query: 467 ALAIEHYACYVDLLGKSGKIEDACKVVSTM 496
A + VD+ K G +EDA ++ M
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERM 489
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 118/221 (53%), Gaps = 2/221 (0%)
Query: 247 LRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIR 306
LR GKA+H + G D + L A++ +Y +C + + A F+ + KDV W+S++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSY-AEKQFDFLE-KDVTAWNSMLS 133
Query: 307 GYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNF 366
YS G + ++ F + +I PN T +LS+C R++ + G +HC ++K GL
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 367 DVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQ 426
+ G AL++MY+KC I+ + ++F + + V WT L SGY G EEA+ +F M+
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 427 ESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIA 467
+ G PD + + +++ G +K+A LF + +A
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVA 294
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 160/362 (44%), Gaps = 53/362 (14%)
Query: 145 LELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMIS 204
L +G+ +H+ ++ G + + A++DLY+KC A + F+ + ++ +W +M+S
Sbjct: 76 LRIGKAVHSKSLILG-IDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLS 133
Query: 205 GCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDF 264
+ F ++ + P + T +IVL CA ++ G+ IH G +
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 265 DHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRM 324
+ + AL+ MY +C + + AR +FE + V W+ + GY ++G EA+ +F RM
Sbjct: 194 NSYCGGALVDMYAKC-DRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 325 RLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSI 384
R E P+ + + ++ N Y + G +
Sbjct: 253 RDEGHRPDHLAFVTVI-----------------------------------NTYIRLGKL 277
Query: 385 TSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSAC 444
+ +F EM++ D V+W +ISG+G G A++ F M++S V+ T+ ++LSA
Sbjct: 278 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 445 N-----HAGLVKEAETLFNNVMKEKKIALAIEHY--ACYVDLLGKSGKIEDACKVVSTMP 497
GLV AE + K+ LA Y + V + K K+E A KV +
Sbjct: 338 GIVANLDLGLVVHAEAI--------KLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE 389
Query: 498 MK 499
K
Sbjct: 390 EK 391
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 8/212 (3%)
Query: 1 MVSKH----FYEQTLHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALK 56
M+S H FYE+ L YK+ H G+ + A +V++ C+ + + G +H
Sbjct: 703 MMSGHSQNGFYEEALKFYKEMRH-DGVLPDQATFVTVLRVCSVLSSLRE-GRAIHSLIFH 760
Query: 57 SGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYR-DTISWNSIINCFTQNGFYVRSLE 115
D D + SN+LI MYAK + + Q+FDEM R + +SWNS+IN + +NG+ +L+
Sbjct: 761 LAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALK 820
Query: 116 MFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLY 175
+F M + G+++ CS G++ GR+I ++I E V ++DL
Sbjct: 821 IFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLL 880
Query: 176 SKCHHWLIALRVFEQMVIRNEVS-WTAMISGC 206
+ + A E ++ + W++++ C
Sbjct: 881 GRWGYLQEADDFIEAQNLKPDARLWSSLLGAC 912
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 337 bits (865), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 186/559 (33%), Positives = 322/559 (57%), Gaps = 12/559 (2%)
Query: 21 SGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPE 80
SGL + PSV+KAC G ++HC ALK G D ++ SLI +Y+++
Sbjct: 147 SGLTPDYRTFPSVLKACRTVID----GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVG 202
Query: 81 SAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCS 140
+A LFDEMP RD SWN++I+ + Q+G +L + + + + + ++S C+
Sbjct: 203 NARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACT 258
Query: 141 QIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWT 200
+ G+ G IH+ I G E +FVS L+DLY++ +VF++M +R+ +SW
Sbjct: 259 EAGDFNRGVTIHSYSIKHG-LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWN 317
Query: 201 AMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCC 260
++I ++ I LF+ M+ ++P +TL + ++L D+R +++ G+
Sbjct: 318 SIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRK 377
Query: 261 G-FDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMK 319
G F D + A++ MY + + AR +F DV+ W++II GY+Q+G SEA++
Sbjct: 378 GWFLEDITIGNAVVVMYAKLG-LVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIE 436
Query: 320 LFSRMRLE-RIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMY 378
+++ M E I N T +++L +C++ L G+ +H ++K GL DV + +L +MY
Sbjct: 437 MYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMY 496
Query: 379 SKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVL 438
KCG + + +F ++ + V W TLI+ +GFHG+GE+A+ LF EM + GV+PD IT +
Sbjct: 497 GKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFV 556
Query: 439 AILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPM 498
+LSAC+H+GLV E + F + + I +++HY C VD+ G++G++E A K + +M +
Sbjct: 557 TLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSL 616
Query: 499 KPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNWLGAEEV 558
+P I +L+SACR+HG +++ ++ + L E EPE+ + LLS + + +G W G +E+
Sbjct: 617 QPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEI 676
Query: 559 WRVMRAKGLSKSYGFSRIE 577
+ KGL K+ G+S +E
Sbjct: 677 RSIAHGKGLRKTPGWSSME 695
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 149/511 (29%), Positives = 259/511 (50%), Gaps = 27/511 (5%)
Query: 50 LHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGF 109
LH + S + IS L+++Y A FD + RD +WN +I+ + + G
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 110 ---YVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVF 166
+R +F M G ++ C + + G +IH L + G F V+
Sbjct: 133 SSEVIRCFSLF--MLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFG-FMWDVY 186
Query: 167 VSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDL---FRAMQ 223
V+ +L+ LYS+ A +F++M +R+ SW AMISG S N + L RAM
Sbjct: 187 VAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMD 246
Query: 224 REGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEAL 283
VT+ +L AC E D G IH Y+ G + + +S L+ +Y E L
Sbjct: 247 -------SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGR-L 298
Query: 284 HPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSC 343
+ +F+R V+D++ W+SII+ Y + A+ LF MRL RI+P+ +TL+++ S
Sbjct: 299 RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASIL 358
Query: 344 TRQSFLSHGLGVHCYIMKAGLNF-DVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSW 402
++ + V + ++ G D++IGNA++ MY+K G + S+ +FN + D +SW
Sbjct: 359 SQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISW 418
Query: 403 TTLISGYGFHGYGEEALQLFLEMQESG-VEPDAITVLAILSACNHAGLVKEAETLFNNVM 461
T+ISGY +G+ EA++++ M+E G + + T +++L AC+ AG +++ L ++
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL 478
Query: 462 KEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVA 521
K + L + D+ GK G++EDA + +P + ++ ++L++ HG E A
Sbjct: 479 K-NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKA 536
Query: 522 EMLAHQLIE--AEPENAANYTLLSMVCSESG 550
ML ++++ +P++ TLLS CS SG
Sbjct: 537 VMLFKEMLDEGVKPDHITFVTLLS-ACSHSG 566
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 335 bits (859), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 181/562 (32%), Positives = 313/562 (55%), Gaps = 7/562 (1%)
Query: 18 LHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFS 77
L G + + +KAC Q + G ++HC +K S D V+ L+ MYAK
Sbjct: 133 LMKHGFRYDDIVFSKALKACTELQDLDN-GKKIHCQLVKVPS-FDNVVLTGLLDMYAKCG 190
Query: 78 KPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIIS 137
+ +SA+++F+++ R+ + W S+I + +N L +F M + +I
Sbjct: 191 EIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIM 250
Query: 138 LCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEV 197
C+++ L G+ H ++ G ELS + T+LLD+Y KC A RVF + + V
Sbjct: 251 ACTKLSALHQGKWFHGCLVKSG-IELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLV 309
Query: 198 SWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYA 257
WTAMI G + + + + LF+ M+ +KP VT+ VL C + +L G+++HG +
Sbjct: 310 MWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLS 369
Query: 258 YCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEA 317
G +D +++ AL+HMY +C + A+ +FE KD+V W+SII G+SQ+G + EA
Sbjct: 370 IKVGI-WDTNVANALVHMYAKCYQN-RDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEA 427
Query: 318 MKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGL--NFDVSIGNALM 375
+ LF RM E + PN VT+ ++ S+C L+ G +H Y +K G + V +G AL+
Sbjct: 428 LFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALL 487
Query: 376 NMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAI 435
+ Y+KCG S+ IF+ + ++ ++W+ +I GYG G +L+LF EM + +P+
Sbjct: 488 DFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNES 547
Query: 436 TVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVST 495
T +ILSAC H G+V E + F+++ K+ + +HY C VD+L ++G++E A ++
Sbjct: 548 TFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEK 607
Query: 496 MPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNWLGA 555
MP++P R + + C +H R ++ E++ ++++ P++A+ Y L+S + + G W A
Sbjct: 608 MPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQA 667
Query: 556 EEVWRVMRAKGLSKSYGFSRIE 577
+EV +M+ +GLSK G S +E
Sbjct: 668 KEVRNLMKQRGLSKIAGHSTME 689
Score = 228 bits (582), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 144/504 (28%), Positives = 255/504 (50%), Gaps = 7/504 (1%)
Query: 49 QLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNG 108
Q H +G D I+ L+S+Y F + A +FD++P D W ++ C+ N
Sbjct: 62 QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNK 121
Query: 109 FYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVS 168
V ++++ + GF + + + C+++ +L+ G++IH ++ SF+ V
Sbjct: 122 ESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL-- 179
Query: 169 TALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVK 228
T LLD+Y+KC A +VF + +RN V WT+MI+G + + + G+ LF M+ V
Sbjct: 180 TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL 239
Query: 229 PTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARI 288
T +++AC +L L GK HG G + L +L+ MY +C + + R+
Sbjct: 240 GNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRV 299
Query: 289 IFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSF 348
E + V D+V+W+++I GY+ +G ++EA+ LF +M+ I+PN VT+ ++LS C
Sbjct: 300 FNEHSHV-DLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIEN 358
Query: 349 LSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISG 408
L G VH +K G+ +D ++ NAL++MY+KC + +F + +D V+W ++ISG
Sbjct: 359 LELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISG 417
Query: 409 YGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIAL 468
+ +G EAL LF M V P+ +TV ++ SAC G + +L +K +A
Sbjct: 418 FSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLAS 477
Query: 469 AIEHYA-CYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHG-RLEVAEMLAH 526
+ H +D K G + A + T+ K +T S+++ G + E+
Sbjct: 478 SSVHVGTALLDFYAKCGDPQSARLIFDTIEEK-NTITWSAMIGGYGKQGDTIGSLELFEE 536
Query: 527 QLIEAEPENAANYTLLSMVCSESG 550
L + + N + +T + C +G
Sbjct: 537 MLKKQQKPNESTFTSILSACGHTG 560
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 190/564 (33%), Positives = 314/564 (55%), Gaps = 17/564 (3%)
Query: 30 LPSVIKACAYAQTHQHF--GLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFD 87
L SV+ AC+ + G Q+H L+ G + + I N+L++MY K K S+ L
Sbjct: 202 LVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLG 260
Query: 88 EMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELEL 147
RD ++WN++++ QN + +LE REM L G ++ ++ CS + L
Sbjct: 261 SFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT 320
Query: 148 GRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCI 207
G+++HA + +GS + + FV +AL+D+Y C L RVF+ M R W AMI+G
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380
Query: 208 DSQNYDTGIDLFRAMQRE-GVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDH 266
+++ + LF M+ G+ T+ V+ AC +AIHG+ G D D
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR 440
Query: 267 HLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMR- 325
+ LM MY + + A IF + + +D+V W+++I GY S +A+ L +M+
Sbjct: 441 FVQNTLMDMYSRLGK-IDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 499
Query: 326 LER----------IEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALM 375
LER ++PNS+TL+ IL SC S L+ G +H Y +K L DV++G+AL+
Sbjct: 500 LERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALV 559
Query: 376 NMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAI 435
+MY+KCG + S ++F+++ ++ ++W +I YG HG G+EA+ L M GV+P+ +
Sbjct: 560 DMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEV 619
Query: 436 TVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVST 495
T +++ +AC+H+G+V E +F + + + + +HYAC VDLLG++G+I++A ++++
Sbjct: 620 TFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNM 679
Query: 496 MPMK-PSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNWLG 554
MP SSL+ A RIH LE+ E+ A LI+ EP A++Y LL+ + S +G W
Sbjct: 680 MPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDK 739
Query: 555 AEEVWRVMRAKGLSKSYGFSRIEN 578
A EV R M+ +G+ K G S IE+
Sbjct: 740 ATEVRRNMKEQGVRKEPGCSWIEH 763
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 154/547 (28%), Positives = 274/547 (50%), Gaps = 24/547 (4%)
Query: 22 GLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPV-ISNSLISMYAKFSKPE 80
G+ + P+++KA A Q + G Q+H K G D V ++N+L+++Y K
Sbjct: 92 GIKPDNYAFPALLKAVADLQDME-LGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFG 150
Query: 81 SAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCS 140
+ Y++FD + R+ +SWNS+I+ + +LE FR M + L +++ CS
Sbjct: 151 AVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS 210
Query: 141 QIGELE---LGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEV 197
+ E +G+Q+HA + G EL+ F+ L+ +Y K + + R+ V
Sbjct: 211 NLPMPEGLMMGKQVHAYGLRKG--ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLV 268
Query: 198 SWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYA 257
+W ++S ++ ++ R M EGV+P T++ VL AC+ L LR GK +H YA
Sbjct: 269 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 328
Query: 258 YCCG-FDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSE 316
G D + + +AL+ MYC C + L R +F+ + + +W+++I GYSQ+ E
Sbjct: 329 LKNGSLDENSFVGSALVDMYCNCKQVLS-GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKE 387
Query: 317 AMKLFSRMRLER-IEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALM 375
A+ LF M + NS T+ ++ +C R S +H +++K GL+ D + N LM
Sbjct: 388 ALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLM 447
Query: 376 NMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQ--------- 426
+MYS+ G I + +IF +M RD V+W T+I+GY F + E+AL L +MQ
Sbjct: 448 DMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 507
Query: 427 --ESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSG 484
++P++IT++ IL +C + + + + +K +A + + VD+ K G
Sbjct: 508 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK-NNLATDVAVGSALVDMYAKCG 566
Query: 485 KIEDACKVVSTMPMKPSTRILSSLVSACRIHGR-LEVAEMLAHQLIEAEPENAANYTLLS 543
++ + KV +P K + + ++ A +HG E ++L +++ N + +
Sbjct: 567 CLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVF 625
Query: 544 MVCSESG 550
CS SG
Sbjct: 626 AACSHSG 632
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 209/407 (51%), Gaps = 12/407 (2%)
Query: 97 WNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVI 156
W ++ ++ ++ + +M + G ++ + + ++ELG+QIHA V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 157 VDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGI 216
G SV V+ L++LY KC + +VF+++ RN+VSW ++IS + ++ +
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 217 DLFRAMQREGVKPTRVTLTIVLLACAEL---RDLRNGKAIHGYAYCCGFDFDHHLSAALM 273
+ FR M E V+P+ TL V+ AC+ L L GK +H Y G + + + L+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 243
Query: 274 HMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNS 333
MY + + L ++++ +D+V W++++ Q+ L EA++ M LE +EP+
Sbjct: 244 AMYGKLGK-LASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 334 VTLLAILSSCTRQSFLSHGLGVHCYIMKAG-LNFDVSIGNALMNMYSKCGSITSSHQIFN 392
T+ ++L +C+ L G +H Y +K G L+ + +G+AL++MY C + S ++F+
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 393 EMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQES-GVEPDAITVLAILSACNHAGLVK 451
M R W +I+GY + + +EAL LF+ M+ES G+ ++ T+ ++ AC +G
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 422
Query: 452 EAETLFNNVMKEKKIALAIEHYA--CYVDLLGKSGKIEDACKVVSTM 496
E + V+K L + + +D+ + GKI+ A ++ M
Sbjct: 423 RKEAIHGFVVKR---GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 332 bits (852), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 196/609 (32%), Positives = 320/609 (52%), Gaps = 53/609 (8%)
Query: 18 LHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFS 77
+H + P V KAC + + G H +L +G ++ + N+L++MY++
Sbjct: 118 MHSLSWTPDNYTFPFVFKACGEISSVR-CGESAHALSLVTGFISNVFVGNALVAMYSRCR 176
Query: 78 KPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAE--LLAGI 135
A ++FDEM D +SWNSII + + G +LEMF M F + + L +
Sbjct: 177 SLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRM-TNEFGCRPDNITLVNV 235
Query: 136 ISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRN 195
+ C+ +G LG+Q+H + + ++FV L+D+Y+KC A VF M +++
Sbjct: 236 LPPCASLGTHSLGKQLHCFAVTSEMIQ-NMFVGNCLVDMYAKCGMMDEANTVFSNMSVKD 294
Query: 196 EVSWTAMISGCIDSQNYDTGIDLFRAMQRE------------------------------ 225
VSW AM++G ++ + LF MQ E
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCR 354
Query: 226 -----GVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDF-------DHHLSAALM 273
G+KP VTL VL CA + L +GK IH YA D ++ + L+
Sbjct: 355 QMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLI 414
Query: 274 HMYCECTEALHPARIIFER--TKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLE--RI 329
MY +C + + AR +F+ K +DVV W+ +I GYSQ GD ++A++L S M E +
Sbjct: 415 DMYAKCKK-VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQT 473
Query: 330 EPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLN-FDVSIGNALMNMYSKCGSITSSH 388
PN+ T+ L +C + L G +H Y ++ N + + N L++MY+KCGSI+ +
Sbjct: 474 RPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDAR 533
Query: 389 QIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAG 448
+F+ M A++ V+WT+L++GYG HGYGEEAL +F EM+ G + D +T+L +L AC+H+G
Sbjct: 534 LVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSG 593
Query: 449 LVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSL 508
++ + FN + ++ EHYAC VDLLG++G++ A +++ MPM+P + +
Sbjct: 594 MIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAF 653
Query: 509 VSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNWLGAEEVWRVMRAKGLS 568
+S CRIHG++E+ E A ++ E + +YTLLS + + +G W + +MR KG+
Sbjct: 654 LSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVK 713
Query: 569 KSYGFSRIE 577
K G S +E
Sbjct: 714 KRPGCSWVE 722
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/506 (28%), Positives = 233/506 (46%), Gaps = 52/506 (10%)
Query: 65 ISNSLISMYAKFSKPESAYQLFDEMPYRD--TISWNSIINCFTQNGFYVRSLEMFREMYL 122
+++ LIS Y A L P D WNS+I + NG + L +F M+
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 123 CGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWL 182
+ + C +I + G HAL +V G F +VFV AL+ +YS+C
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG-FISNVFVGNALVAMYSRCRSLS 179
Query: 183 IALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQRE-GVKPTRVTLTIVLLAC 241
A +VF++M + + VSW ++I +++F M E G +P +TL VL C
Sbjct: 180 DARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPC 239
Query: 242 AELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIW 301
A L GK +H +A + + L+ MY +C + A +F VKDVV W
Sbjct: 240 ASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCG-MMDEANTVFSNMSVKDVVSW 298
Query: 302 SSIIRGYSQSGDLSEAMKLFSRMRLER--------------------------------- 328
++++ GYSQ G +A++LF +M+ E+
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
Query: 329 --IEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVS-------IGNALMNMYS 379
I+PN VTL+++LS C L HG +HCY +K ++ + + N L++MY+
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418
Query: 380 KCGSITSSHQIFNEMAA--RDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVE--PDAI 435
KC + ++ +F+ ++ RD V+WT +I GY HG +AL+L EM E + P+A
Sbjct: 419 KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478
Query: 436 TVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVST 495
T+ L AC ++ + + ++ ++ A+ + C +D+ K G I DA V
Sbjct: 479 TISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDN 538
Query: 496 MPMKPSTRILSSLVSACRIHGRLEVA 521
M M + +SL++ +HG E A
Sbjct: 539 M-MAKNEVTWTSLMTGYGMHGYGEEA 563
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 137/539 (25%), Positives = 226/539 (41%), Gaps = 91/539 (16%)
Query: 11 LHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLI 70
L ++ + + G + L +V+ CA TH G QLHC A+ S + + N L+
Sbjct: 213 LEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHS-LGKQLHCFAVTSEMIQNMFVGNCLV 271
Query: 71 SMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMF------------- 117
MYAK + A +F M +D +SWN+++ ++Q G + ++ +F
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 118 ----------------------REMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALV 155
R+M G L ++S C+ +G L G++IH
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 156 I-------VDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVI--RNEVSWTAMISGC 206
I +G + ++ ++ L+D+Y+KC A +F+ + R+ V+WT MI G
Sbjct: 392 IKYPIDLRKNGHGDENMVINQ-LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450
Query: 207 IDSQNYDTGIDLFRAMQREG--VKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFD- 263
+ + ++L M E +P T++ L+ACA L LR GK IH YA +
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510
Query: 264 FDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSR 323
+S L+ MY +C ++ AR++F+ K+ V W+S++ GY G EA+ +F
Sbjct: 511 VPLFVSNCLIDMYAKCG-SISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 569
Query: 324 MRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGS 383
MR + + VTLL +L +C+ + G+ Y + F VS G
Sbjct: 570 MRRIGFKLDGVTLLVVLYACSHSGMIDQGME---YFNRMKTVFGVSPGPE---------- 616
Query: 384 ITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSA 443
+ L+ G G AL+L EM +EP + +A LS
Sbjct: 617 -----------------HYACLVDLLGRAGRLNAALRLIEEMP---MEPPPVVWVAFLSC 656
Query: 444 CNHAGLVKEAETLFNNVMKEKKIALAIEHYACYV---DLLGKSGKIEDACKVVSTMPMK 499
C G V+ E EK LA H Y +L +G+ +D ++ S M K
Sbjct: 657 CRIHGKVELGE-----YAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHK 710
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 202/480 (42%), Gaps = 74/480 (15%)
Query: 16 QELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALK-------SGSDADPVISNS 68
+++ SG+ N L SV+ CA H G ++HC A+K +G + ++ N
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMH-GKEIHCYAIKYPIDLRKNGHGDENMVINQ 412
Query: 69 LISMYAKFSKPESAYQLFDEM--PYRDTISWNSIINCFTQNGFYVRSLEMFREMYL--CG 124
LI MYAK K ++A +FD + RD ++W +I ++Q+G ++LE+ EM+ C
Sbjct: 413 LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472
Query: 125 FVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIA 184
A ++ + C+ + L +G+QIHA + + + +FVS L+D+Y+KC A
Sbjct: 473 TRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA 532
Query: 185 LRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAEL 244
VF+ M+ +NEV+WT++++G + + +F M+R G K VTL +VL AC+
Sbjct: 533 RLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSH- 591
Query: 245 RDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSI 304
+G G Y +S H C +
Sbjct: 592 ----SGMIDQGMEYFNRMKTVFGVSPGPEHYAC--------------------------L 621
Query: 305 IRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGL 364
+ ++G L+ A++L M + EP V +A LS C + G I +
Sbjct: 622 VDLLGRAGRLNAALRLIEEMPM---EPPPVVWVAFLSCCRIHGKVELGEYAAEKITELAS 678
Query: 365 NFDVSIGNALMNMYSKCGSITSSHQIFNEM-----AARDFVSW-------TTLISGYGFH 412
N D S L N+Y+ G +I + M R SW TT G H
Sbjct: 679 NHDGSY-TLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTH 737
Query: 413 GYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEH 472
+ +E Q+ L+ + G V E ++V E+K L EH
Sbjct: 738 PHAKEIYQVLLDHMQR---------------IKDIGYVPETGFALHDVDDEEKDDLLFEH 782
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 3/233 (1%)
Query: 301 WSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIM 360
W+S+IR Y +G ++ + LF M P++ T + +C S + G H +
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 361 KAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQ 420
G +V +GNAL+ MYS+C S++ + ++F+EM+ D VSW ++I Y G + AL+
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE 214
Query: 421 LFLEM-QESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDL 479
+F M E G PD IT++ +L C G + L + + I C VD+
Sbjct: 215 MFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG-NCLVDM 273
Query: 480 LGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAE 532
K G +++A V S M +K +++V+ GR E A L ++ E +
Sbjct: 274 YAKCGMMDEANTVFSNMSVKDVVS-WNAMVAGYSQIGRFEDAVRLFEKMQEEK 325
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 332 bits (851), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 187/570 (32%), Positives = 319/570 (55%), Gaps = 12/570 (2%)
Query: 12 HLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGS-DADPVISNSLI 70
H+++ E P LP +KAC + ++G +H K + +D + +SLI
Sbjct: 50 HMFRDEEKPDNF-----TLPVALKACGELR-EVNYGEMIHGFVKKDVTLGSDLYVGSSLI 103
Query: 71 SMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAE 130
MY K + A ++FDE+ D ++W+S+++ F +NG +++E FR M + V
Sbjct: 104 YMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDR 163
Query: 131 L-LAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFE 189
+ L ++S C+++ LGR +H VI G F + + +LL+ Y+K + A+ +F+
Sbjct: 164 VTLITLVSACTKLSNSRLGRCVHGFVIRRG-FSNDLSLVNSLLNCYAKSRAFKEAVNLFK 222
Query: 190 QMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRN 249
+ ++ +SW+ +I+ + + + +F M +G +P T+ VL ACA DL
Sbjct: 223 MIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQ 282
Query: 250 GKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYS 309
G+ H A G + + +S AL+ MY +C A +F R KDVV W ++I G++
Sbjct: 283 GRKTHELAIRKGLETEVKVSTALVDMYMKCFSP-EEAYAVFSRIPRKDVVSWVALISGFT 341
Query: 310 QSGDLSEAMKLFSRMRLER-IEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDV 368
+G +++ FS M LE P+++ ++ +L SC+ FL H Y++K G + +
Sbjct: 342 LNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNP 401
Query: 369 SIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEM-QE 427
IG +L+ +YS+CGS+ ++ ++FN +A +D V WT+LI+GYG HG G +AL+ F M +
Sbjct: 402 FIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKS 461
Query: 428 SGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIE 487
S V+P+ +T L+ILSAC+HAGL+ E +F ++ + ++A +EHYA VDLLG+ G ++
Sbjct: 462 SEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLD 521
Query: 488 DACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCS 547
A ++ MP P+ +IL +L+ ACRIH E+AE +A +L E E +A Y L+S V
Sbjct: 522 TAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYG 581
Query: 548 ESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
G W E++ ++ +G+ K S IE
Sbjct: 582 VKGEWENVEKLRNSVKQRGIKKGLAESLIE 611
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 248/482 (51%), Gaps = 11/482 (2%)
Query: 75 KFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAG 134
KFS A Q+F EM R WN+++ ++ + L F M+ L
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 135 IISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIR 194
+ C ++ E+ G IH V D + ++V ++L+ +Y KC + ALR+F+++
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 195 NEVSWTAMISGCIDSQNYDTGIDLFRAM-QREGVKPTRVTLTIVLLACAELRDLRNGKAI 253
+ V+W++M+SG + + ++ FR M V P RVTL ++ AC +L + R G+ +
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 254 HGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGD 313
HG+ GF D L +L++ Y + + A A +F+ KDV+ WS++I Y Q+G
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAK-SRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244
Query: 314 LSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNA 373
+EA+ +F+ M + EPN T+L +L +C L G H ++ GL +V + A
Sbjct: 245 AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTA 304
Query: 374 LMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLF-LEMQESGVEP 432
L++MY KC S ++ +F+ + +D VSW LISG+ +G +++ F + + E+ P
Sbjct: 305 LVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRP 364
Query: 433 DAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHY--ACYVDLLGKSGKIEDAC 490
DAI ++ +L +C+ G +++A+ + V+ K + A V+L + G + +A
Sbjct: 365 DAILMVKVLGSCSELGFLEQAKCFHSYVI---KYGFDSNPFIGASLVELYSRCGSLGNAS 421
Query: 491 KVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMV--CSE 548
KV + + +K T + +SL++ IHG+ A + ++++ T LS++ CS
Sbjct: 422 KVFNGIALK-DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSH 480
Query: 549 SG 550
+G
Sbjct: 481 AG 482
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Query: 276 YCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVT 335
+C + AR +F + + W+++++ S+ E + FS M + +P++ T
Sbjct: 3 FCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFT 62
Query: 336 LLAILSSCTRQSFLSHGLGVHCYIMK-AGLNFDVSIGNALMNMYSKCGSITSSHQIFNEM 394
L L +C +++G +H ++ K L D+ +G++L+ MY KCG + + ++F+E+
Sbjct: 63 LPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL 122
Query: 395 AARDFVSWTTLISGYGFHGYGEEALQLFLEM-QESGVEPDAITVLAILSAC 444
D V+W++++SG+ +G +A++ F M S V PD +T++ ++SAC
Sbjct: 123 EKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSAC 173
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 3/179 (1%)
Query: 375 MNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDA 434
M K S + Q+F EM R W TL+ EE L F M +PD
Sbjct: 1 MGFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDN 60
Query: 435 ITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVS 494
T+ L AC V E + V K+ + + + + + K G++ +A ++
Sbjct: 61 FTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFD 120
Query: 495 TMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMV--CSESGN 551
+ KP SS+VS +G A +++ A TL+++V C++ N
Sbjct: 121 ELE-KPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSN 178
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 329 bits (844), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 184/572 (32%), Positives = 306/572 (53%), Gaps = 53/572 (9%)
Query: 49 QLHCTALKSGSDADPVISNSLISMYA--KFSKPESAYQLFDEMPYRDTISWNSIINCFTQ 106
Q H +++G+ +DP ++ L +M A F+ E A ++FDE+P ++ +WN++I +
Sbjct: 48 QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYAS 107
Query: 107 NGFYVRSLEMFREM----------YLCGFVLKAELLAGIISLCSQIGELELGRQIHALVI 156
V S+ F +M Y F++KA +++ L LG+ +H +
Sbjct: 108 GPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKA---------AAEVSSLSLGQSLHGMA- 157
Query: 157 VDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGI 216
V + VFV+ +L+ Y C A +VF + ++ VSW +MI+G + + D +
Sbjct: 158 VKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKAL 217
Query: 217 DLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMY 276
+LF+ M+ E VK + VT+ VL ACA++R+L G+ + Y + + L+ A++ MY
Sbjct: 218 ELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Query: 277 CEC------------------------------TEALHPARIIFERTKVKDVVIWSSIIR 306
+C +E AR + KD+V W+++I
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 307 GYSQSGDLSEAMKLFSRMRLER-IEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLN 365
Y Q+G +EA+ +F ++L++ ++ N +TL++ LS+C + L G +H YI K G+
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIR 397
Query: 366 FDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEM 425
+ + +AL++MYSKCG + S ++FN + RD W+ +I G HG G EA+ +F +M
Sbjct: 398 MNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM 457
Query: 426 QESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGK 485
QE+ V+P+ +T + AC+H GLV EAE+LF+ + I +HYAC VD+LG+SG
Sbjct: 458 QEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGY 517
Query: 486 IEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMV 545
+E A K + MP+ PST + +L+ AC+IH L +AEM +L+E EP N + LLS +
Sbjct: 518 LEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNI 577
Query: 546 CSESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
++ G W E+ + MR GL K G S IE
Sbjct: 578 YAKLGKWENVSELRKHMRVTGLKKEPGCSSIE 609
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 184/356 (51%), Gaps = 35/356 (9%)
Query: 21 SGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPE 80
S Y N P +IKA A + G LH A+KS +D ++NSLI Y +
Sbjct: 125 SQCYPNKYTFPFLIKAAAEVSSLS-LGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLD 183
Query: 81 SAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCS 140
SA ++F + +D +SWNS+IN F Q G ++LE+F++M + G++S C+
Sbjct: 184 SACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACA 243
Query: 141 QIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWT 200
+I LE GRQ+ + I + +++ ++ A+LD+Y+KC A R+F+ M ++ V+WT
Sbjct: 244 KIRNLEFGRQVCSY-IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWT 302
Query: 201 AMISGCIDSQNYDTGIDLFRAMQREGV--------------KP----------------- 229
M+ G S++Y+ ++ +M ++ + KP
Sbjct: 303 TMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMK 362
Query: 230 -TRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARI 288
++TL L ACA++ L G+ IH Y G + H+++AL+HMY +C + L +R
Sbjct: 363 LNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGD-LEKSRE 421
Query: 289 IFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCT 344
+F + +DV +WS++I G + G +EA+ +F +M+ ++PN VT + +C+
Sbjct: 422 VFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS 477
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 227/483 (46%), Gaps = 49/483 (10%)
Query: 136 ISLCSQIGELELGRQIHALVIVDGSFE----LSVFVSTALLDLYSKCHHWLIALRVFEQM 191
ISL + L +Q H +I G+F S + A L ++ + A +VF+++
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEY---ARKVFDEI 90
Query: 192 VIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREG-VKPTRVTLTIVLLACAELRDLRNG 250
N +W +I + I F M E P + T ++ A AE+ L G
Sbjct: 91 PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 150
Query: 251 KAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQ 310
+++HG A D ++ +L+H Y C + L A +F K KDVV W+S+I G+ Q
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGD-LDSACKVFTTIKEKDVVSWNSMINGFVQ 209
Query: 311 SGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSI 370
G +A++LF +M E ++ + VT++ +LS+C + L G V YI + +N ++++
Sbjct: 210 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTL 269
Query: 371 GNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGF------------------- 411
NA+++MY+KCGSI + ++F+ M +D V+WTT++ GY
Sbjct: 270 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 329
Query: 412 ------------HGYGEEALQLFLEMQ-ESGVEPDAITVLAILSACNHAGLVKEAETLFN 458
+G EAL +F E+Q + ++ + IT+++ LSAC G + E +
Sbjct: 330 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGAL-ELGRWIH 388
Query: 459 NVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRL 518
+ +K+ I + + + + K G +E + +V +++ K + S+++ +HG
Sbjct: 389 SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHGCG 447
Query: 519 EVAEMLAHQLIEAE-PENAANYTLLSMVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
A + +++ EA N +T + CS +G AE ++ M + +YG E
Sbjct: 448 NEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMES-----NYGIVPEE 502
Query: 578 NEY 580
Y
Sbjct: 503 KHY 505
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 74/182 (40%), Gaps = 2/182 (1%)
Query: 26 NTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQL 85
N L S + ACA + G +H K G + ++++LI MY+K E + ++
Sbjct: 364 NQITLVSTLSACAQVGALE-LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREV 422
Query: 86 FDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGEL 145
F+ + RD W+++I +G +++MF +M + CS G +
Sbjct: 423 FNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLV 482
Query: 146 ELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVS-WTAMIS 204
+ + + + ++D+ + + A++ E M I S W A++
Sbjct: 483 DEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLG 542
Query: 205 GC 206
C
Sbjct: 543 AC 544
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 328 bits (842), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 176/532 (33%), Positives = 298/532 (56%), Gaps = 6/532 (1%)
Query: 47 GLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQ 106
G +H A+ G D++ ++ ++++ MY KF + E A ++FD MP +DTI WN++I+ + +
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197
Query: 107 NGFYVRSLEMFREMYLCGFV-LKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSV 165
N YV S+++FR++ L L I+ +++ EL LG QIH+L G +
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD- 256
Query: 166 FVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQRE 225
+V T + LYSKC + +F + + V++ AMI G + + + LF+ +
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 226 GVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHP 285
G + TL ++ L + AIHGY F +S AL +Y + E +
Sbjct: 317 GARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHASVSTALTTVYSKLNE-IES 372
Query: 286 ARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTR 345
AR +F+ + K + W+++I GY+Q+G +A+ LF M+ PN VT+ ILS+C +
Sbjct: 373 ARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQ 432
Query: 346 QSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTL 405
LS G VH + + + AL+ MY+KCGSI + ++F+ M ++ V+W T+
Sbjct: 433 LGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTM 492
Query: 406 ISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKK 465
ISGYG HG G+EAL +F EM SG+ P +T L +L AC+HAGLVKE + +FN+++
Sbjct: 493 ISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYG 552
Query: 466 IALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLA 525
+++HYAC VD+LG++G ++ A + + M ++P + + +L+ ACRIH +A ++
Sbjct: 553 FEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVS 612
Query: 526 HQLIEAEPENAANYTLLSMVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
+L E +P+N + LLS + S N+ A V + + + L+K+ G++ IE
Sbjct: 613 EKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIE 664
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 125/528 (23%), Positives = 237/528 (44%), Gaps = 15/528 (2%)
Query: 49 QLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNG 108
Q H + G D + L + A +F + D +N ++ F+ N
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 109 FYVRSLEMFREMYL-CGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFV 167
SL +F + + A IS S + GR IH +VDG + + +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGC-DSELLL 156
Query: 168 STALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREG- 226
+ ++ +Y K A +VF++M ++ + W MISG ++ Y I +FR + E
Sbjct: 157 GSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESC 216
Query: 227 VKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPA 286
+ TL +L A AEL++LR G IH A G ++ + +Y +C + +
Sbjct: 217 TRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK-IKMG 275
Query: 287 RIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQ 346
+F + D+V ++++I GY+ +G+ ++ LF + L S TL++++
Sbjct: 276 SALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHL 335
Query: 347 SFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLI 406
+ +H Y +K+ S+ AL +YSK I S+ ++F+E + SW +I
Sbjct: 336 MLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMI 392
Query: 407 SGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKI 466
SGY +G E+A+ LF EMQ+S P+ +T+ ILSAC G + + + +++++
Sbjct: 393 SGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV-HDLVRSTDF 451
Query: 467 ALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAH 526
+I + + K G I +A ++ M K ++++S +HG+ + A + +
Sbjct: 452 ESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEV-TWNTMISGYGLHGQGQEALNIFY 510
Query: 527 QLIEAE-PENAANYTLLSMVCSESGNWLGAEEVWRVMRAKGLSKSYGF 573
+++ + + + CS +G +E++ M + YGF
Sbjct: 511 EMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR-----YGF 553
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 13/175 (7%)
Query: 345 RQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTT 404
R + +SH H I+ G D+S+ L S G+I + IF + D +
Sbjct: 29 RSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNV 88
Query: 405 LISGYGFHGYGEEALQLFLEMQES-GVEPDAITVLAILSAC-----NHAGLVKEAETLFN 458
L+ G+ + +L +F +++S ++P++ T +SA + AG V + + +
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVD 148
Query: 459 NVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACR 513
E + I V + K ++EDA KV MP K T + ++++S R
Sbjct: 149 GCDSELLLGSNI------VKMYFKFWRVEDARKVFDRMPEK-DTILWNTMISGYR 196
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 328 bits (840), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 190/572 (33%), Positives = 321/572 (56%), Gaps = 12/572 (2%)
Query: 10 TLHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSL 69
+L L+ Q L + + IL +V+ AC+ + G Q+H L+ G + D + N L
Sbjct: 233 SLQLFYQ-LMEDNVVPDGYILSTVLSACSILPFLEG-GKQIHAHILRYGLEMDASLMNVL 290
Query: 70 ISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKA 129
I Y K + +A++LF+ MP ++ ISW ++++ + QN + ++E+F M F LK
Sbjct: 291 IDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM--SKFGLKP 348
Query: 130 ELLA--GIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRV 187
++ A I++ C+ + L G Q+HA I + +V+ +L+D+Y+KC A +V
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTI-KANLGNDSYVTNSLIDMYAKCDCLTDARKV 407
Query: 188 FEQMVIRNEVSWTAMISGC--IDSQ-NYDTGIDLFRAMQREGVKPTRVTLTIVLLACAEL 244
F+ + V + AMI G + +Q +++FR M+ ++P+ +T +L A A L
Sbjct: 408 FDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASL 467
Query: 245 RDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSI 304
L K IHG + G + D +AL+ +Y C L +R++F+ KVKD+VIW+S+
Sbjct: 468 TSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY-CLKDSRLVFDEMKVKDLVIWNSM 526
Query: 305 IRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGL 364
GY Q + EA+ LF ++L R P+ T ++++ + + G HC ++K GL
Sbjct: 527 FAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGL 586
Query: 365 NFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLE 424
+ I NAL++MY+KCGS +H+ F+ A+RD V W ++IS Y HG G++ALQ+ +
Sbjct: 587 ECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEK 646
Query: 425 MQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSG 484
M G+EP+ IT + +LSAC+HAGLV++ F +M I EHY C V LLG++G
Sbjct: 647 MMSEGIEPNYITFVGVLSACSHAGLVEDGLKQF-ELMLRFGIEPETEHYVCMVSLLGRAG 705
Query: 485 KIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSM 544
++ A +++ MP KP+ + SL+S C G +E+AE A I ++P+++ ++T+LS
Sbjct: 706 RLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSN 765
Query: 545 VCSESGNWLGAEEVWRVMRAKGLSKSYGFSRI 576
+ + G W A++V M+ +G+ K G S I
Sbjct: 766 IYASKGMWTEAKKVRERMKVEGVVKEPGRSWI 797
Score = 238 bits (607), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 160/551 (29%), Positives = 276/551 (50%), Gaps = 13/551 (2%)
Query: 7 YEQTLHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGL-QLHCTALKSGSDADPVI 65
YE++L ++ + N IL S I+AC+ + + QL +KSG D D +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 66 SNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGF 125
LI Y K + A +FD +P + T++W ++I+ + G SL++F ++
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 126 VLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIAL 185
V +L+ ++S CS + LE G+QIHA ++ G E+ + L+D Y KC + A
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYG-LEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 186 RVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELR 245
++F M +N +SWT ++SG + + ++LF +M + G+KP + +L +CA L
Sbjct: 305 KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLH 364
Query: 246 DLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSII 305
L G +H Y D +++ +L+ MY +C + L AR +F+ DVV+++++I
Sbjct: 365 ALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKC-DCLTDARKVFDIFAAADVVLFNAMI 423
Query: 306 RGYSQSG---DLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKA 362
GYS+ G +L EA+ +F MR I P+ +T +++L + + L +H + K
Sbjct: 424 EGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKY 483
Query: 363 GLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLF 422
GLN D+ G+AL+++YS C + S +F+EM +D V W ++ +GY EEAL LF
Sbjct: 484 GLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLF 543
Query: 423 LEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHY--ACYVDLL 480
LE+Q S PD T +++A + V+ + ++K L Y +D+
Sbjct: 544 LELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKR---GLECNPYITNALLDMY 600
Query: 481 GKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVA-EMLAHQLIEAEPENAANY 539
K G EDA K + + +S++S+ HG + A +ML + E N +
Sbjct: 601 AKCGSPEDAHKAFDSAASRDVV-CWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITF 659
Query: 540 TLLSMVCSESG 550
+ CS +G
Sbjct: 660 VGVLSACSHAG 670
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 210/407 (51%), Gaps = 12/407 (2%)
Query: 45 HFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCF 104
H+ +H + G + D +SN LI++Y++ A ++F++MP R+ +SW+++++
Sbjct: 61 HYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSAC 120
Query: 105 TQNGFYVRSLEMFREMYLCGFVLKAE-LLAGIISLCSQIGELELGR----QIHALVIVDG 159
+G Y SL +F E + E +L+ I CS G GR Q+ + ++ G
Sbjct: 121 NHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSG 178
Query: 160 SFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLF 219
F+ V+V T L+D Y K + A VF+ + ++ V+WT MISGC+ + LF
Sbjct: 179 -FDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF 237
Query: 220 RAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCEC 279
+ + V P L+ VL AC+ L L GK IH + G + D L L+ Y +C
Sbjct: 238 YQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKC 297
Query: 280 TEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAI 339
+ A +F K+++ W++++ GY Q+ EAM+LF+ M ++P+ +I
Sbjct: 298 GRVI-AAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSI 356
Query: 340 LSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDF 399
L+SC L G VH Y +KA L D + N+L++MY+KC +T + ++F+ AA D
Sbjct: 357 LTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADV 416
Query: 400 VSWTTLISGYGFHGYG---EEALQLFLEMQESGVEPDAITVLAILSA 443
V + +I GY G EAL +F +M+ + P +T +++L A
Sbjct: 417 VLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 185/354 (52%), Gaps = 24/354 (6%)
Query: 151 IHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQ 210
+H +IV G EL ++S L++LYS+ + A +VFE+M RN VSW+ M+S C
Sbjct: 66 VHGQIIVWG-LELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHG 124
Query: 211 NYDTGIDLFRAMQR-EGVKPTRVTLTIVLLACAELRDLRNGKA------IHGYAYCCGFD 263
Y+ + +F R P L+ + AC+ L +G+ + + GFD
Sbjct: 125 IYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGL----DGRGRWMVFQLQSFLVKSGFD 180
Query: 264 FDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSR 323
D ++ L+ Y + + AR++F+ K V W+++I G + G +++LF +
Sbjct: 181 RDVYVGTLLIDFYLK-DGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 324 MRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGS 383
+ + + P+ L +LS+C+ FL G +H +I++ GL D S+ N L++ Y KCG
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 384 ITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSA 443
+ ++H++FN M ++ +SWTTL+SGY + +EA++LF M + G++PD +IL++
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 444 CN--HA---GLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKV 492
C HA G A T+ N+ + + ++ +D+ K + DA KV
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSL------IDMYAKCDCLTDARKV 407
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 193/579 (33%), Positives = 317/579 (54%), Gaps = 9/579 (1%)
Query: 3 SKHFYEQTLHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDAD 62
S F E+ L LY + L+ SG+ P V+KACA + G +H S D
Sbjct: 80 SNDFAEKALDLYYKMLN-SGVRPTKYTYPFVLKACAGLRAIDD-GKLIHSHVNCSDFATD 137
Query: 63 PVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMY- 121
+ +L+ YAK + E A ++FDEMP RD ++WN++I+ F+ + + +F +M
Sbjct: 138 MYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRR 197
Query: 122 LCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHW 181
+ G + G+ + G L G+ +H G F + V T +LD+Y+K
Sbjct: 198 IDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMG-FSNDLVVKTGILDVYAKSKCI 256
Query: 182 LIALRVFEQMVIRNEVSWTAMISGCIDSQNY-DTGIDLFRAMQREGVK-PTRVTLTIVLL 239
+ A RVF+ +NEV+W+AMI G ++++ + G F+ + + V T V + ++L+
Sbjct: 257 IYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILM 316
Query: 240 ACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVV 299
CA DL G+ +H YA GF D + ++ Y + +L A F +KDV+
Sbjct: 317 GCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAK-YGSLCDAFRQFSEIGLKDVI 375
Query: 300 IWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYI 359
++S+I G + E+ +LF MR I P+ TLL +L++C+ + L HG H Y
Sbjct: 376 SYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYC 435
Query: 360 MKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEAL 419
+ G + SI NALM+MY+KCG + + ++F+ M RD VSW T++ G+G HG G+EAL
Sbjct: 436 VVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEAL 495
Query: 420 QLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMK-EKKIALAIEHYACYVD 478
LF MQE+GV PD +T+LAILSAC+H+GLV E + LFN++ + + + I+HY C D
Sbjct: 496 SLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTD 555
Query: 479 LLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAAN 538
LL ++G +++A V+ MP +P R+L +L+SAC + E+ ++ ++ ++ E +
Sbjct: 556 LLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKM-QSLGETTES 614
Query: 539 YTLLSMVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
LLS S + W A + + + +GL K+ G+S ++
Sbjct: 615 LVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVD 653
Score = 209 bits (532), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 147/494 (29%), Positives = 258/494 (52%), Gaps = 20/494 (4%)
Query: 68 SLISMYAKFSKPESAYQLFDEMPYR--DTISWNSIINCFTQNGFYVRSLEMFREMYLCGF 125
+L +YA ++ E A +FDE+P+ + I+W+ +I + N F ++L+++ +M G
Sbjct: 40 NLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGV 99
Query: 126 VLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIAL 185
++ C+ + ++ G+ IH+ V F ++V TAL+D Y+KC +A+
Sbjct: 100 RPTKYTYPFVLKACAGLRAIDDGKLIHSHVNC-SDFATDMYVCTALVDFYAKCGELEMAI 158
Query: 186 RVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQR-EGVKPTRVTLTIVLLACAEL 244
+VF++M R+ V+W AMISG I LF M+R +G+ P T+ + A
Sbjct: 159 KVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRA 218
Query: 245 RDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSI 304
LR GKA+HGY GF D + ++ +Y + ++ + AR +F+ K+ V WS++
Sbjct: 219 GALREGKAVHGYCTRMGFSNDLVVKTGILDVYAK-SKCIIYARRVFDLDFKKNEVTWSAM 277
Query: 305 IRGYSQSGDLSEAMKLFSRM----RLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIM 360
I GY ++ + EA ++F +M + + P ++ L IL C R LS G VHCY +
Sbjct: 278 IGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGL--ILMGCARFGDLSGGRCVHCYAV 335
Query: 361 KAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQ 420
KAG D+++ N +++ Y+K GS+ + + F+E+ +D +S+ +LI+G + EE+ +
Sbjct: 336 KAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFR 395
Query: 421 LFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYAC--YVD 478
LF EM+ SG+ PD T+L +L+AC+H + + + A+ C +D
Sbjct: 396 LFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVH---GYAVNTSICNALMD 452
Query: 479 LLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEA--EPENA 536
+ K GK++ A +V TM K ++++ IHG + A L + + E P+
Sbjct: 453 MYTKCGKLDVAKRVFDTM-HKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEV 511
Query: 537 ANYTLLSMVCSESG 550
+LS CS SG
Sbjct: 512 TLLAILS-ACSHSG 524
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 195/401 (48%), Gaps = 12/401 (2%)
Query: 135 IISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIR 194
++ C + L LG+ IH ++ S V L LY+ C+ +A VF+++
Sbjct: 5 LLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHP 64
Query: 195 --NEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKA 252
N ++W MI + + +DL+ M GV+PT+ T VL ACA LR + +GK
Sbjct: 65 RINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKL 124
Query: 253 IHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSG 312
IH + C F D ++ AL+ Y +C E L A +F+ +D+V W+++I G+S
Sbjct: 125 IHSHVNCSDFATDMYVCTALVDFYAKCGE-LEMAIKVFDEMPKRDMVAWNAMISGFSLHC 183
Query: 313 DLSEAMKLFSRM-RLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIG 371
L++ + LF M R++ + PN T++ + + R L G VH Y + G + D+ +
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 372 NALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEM----QE 427
++++Y+K I + ++F+ ++ V+W+ +I GY + +EA ++F +M
Sbjct: 244 TGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNV 303
Query: 428 SGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIE 487
+ V P AI + IL C G + + +K I L + + K G +
Sbjct: 304 AMVTPVAIGL--ILMGCARFGDLSGGRCVHCYAVKAGFI-LDLTVQNTIISFYAKYGSLC 360
Query: 488 DACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQL 528
DA + S + +K +SL++ C ++ R E + L H++
Sbjct: 361 DAFRQFSEIGLKDVIS-YNSLITGCVVNCRPEESFRLFHEM 400
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 180/558 (32%), Positives = 305/558 (54%), Gaps = 6/558 (1%)
Query: 23 LYSNTAI-LPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPES 81
LY+N+ I S + + TH+ Q+H L G + LI + F
Sbjct: 12 LYTNSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITF 71
Query: 82 AYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQ 141
A Q+FD++P WN+II +++N + +L M+ M L + ++ CS
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 142 IGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVI--RNEVSW 199
+ L++GR +HA V G F+ VFV L+ LY+KC A VFE + + R VSW
Sbjct: 132 LSHLQMGRFVHAQVFRLG-FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190
Query: 200 TAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYC 259
TA++S + +++F M++ VKP V L VL A L+DL+ G++IH
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK 250
Query: 260 CGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMK 319
G + + L +L MY +C + + A+I+F++ K ++++W+++I GY+++G EA+
Sbjct: 251 MGLEIEPDLLISLNTMYAKCGQ-VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 309
Query: 320 LFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYS 379
+F M + + P+++++ + +S+C + L ++ Y+ ++ DV I +AL++M++
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFA 369
Query: 380 KCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLA 439
KCGS+ + +F+ RD V W+ +I GYG HG EA+ L+ M+ GV P+ +T L
Sbjct: 370 KCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLG 429
Query: 440 ILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMK 499
+L ACNH+G+V+E FN M + KI +HYAC +DLLG++G ++ A +V+ MP++
Sbjct: 430 LLMACNHSGMVREGWWFFNR-MADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ 488
Query: 500 PSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNWLGAEEVW 559
P + +L+SAC+ H +E+ E A QL +P N +Y LS + + + W EV
Sbjct: 489 PGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVR 548
Query: 560 RVMRAKGLSKSYGFSRIE 577
M+ KGL+K G S +E
Sbjct: 549 VRMKEKGLNKDVGCSWVE 566
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 324 bits (831), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 304/534 (56%), Gaps = 11/534 (2%)
Query: 47 GLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQ 106
GLQL T +K+G ++D V+ NS I+MY++ A ++FDEM ++D ISWNS+++ +Q
Sbjct: 193 GLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQ 252
Query: 107 NG-FYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSV 165
G F ++ +FR+M G L +I+ C +L+L RQIH L I G +E +
Sbjct: 253 EGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRG-YESLL 311
Query: 166 FVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQRE 225
V L+ YSKC VF QM RN VSWT MIS N D + +F M+ +
Sbjct: 312 EVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFD 366
Query: 226 GVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHP 285
GV P VT ++ A ++ G IHG GF + + + + +Y + EAL
Sbjct: 367 GVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKF-EALED 425
Query: 286 ARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTR 345
A+ FE ++++ W+++I G++Q+G EA+K+F E + PN T ++L++
Sbjct: 426 AKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAF 484
Query: 346 QSFLS--HGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWT 403
+S G H +++K GLN + +AL++MY+K G+I S ++FNEM+ ++ WT
Sbjct: 485 AEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWT 544
Query: 404 TLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKE 463
++IS Y HG E + LF +M + V PD +T L++L+ACN G+V + +FN +++
Sbjct: 545 SIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEV 604
Query: 464 KKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEM 523
+ + EHY+C VD+LG++G++++A +++S +P P +L S++ +CR+HG +++
Sbjct: 605 YNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAK 664
Query: 524 LAHQLIEAEPENAANYTLLSMVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
+A +E +PE + +Y + + +E W A E+ + MR K +SK GFS I+
Sbjct: 665 VAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWID 718
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 150/565 (26%), Positives = 280/565 (49%), Gaps = 32/565 (5%)
Query: 9 QTLHLYKQELHPS--GLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVIS 66
+ L ++K+ L G + + L +KAC + G Q+H + SG + +S
Sbjct: 58 RALSIFKENLQLGYFGRHMDEVTLCLALKAC---RGDLKRGCQIHGFSTTSGFTSFVCVS 114
Query: 67 NSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFV 126
N+++ MY K + ++A +F+ + D +SWN+I++ F N +L M G V
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVV 171
Query: 127 LKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALR 186
A + +S C LG Q+ + V+ G E + V + + +YS+ + A R
Sbjct: 172 FDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTG-LESDLVVGNSFITMYSRSGSFRGARR 230
Query: 187 VFEQMVIRNEVSWTAMISGCIDSQNYDTGID---LFRAMQREGVKPTRVTLTIVLLACAE 243
VF++M ++ +SW +++SG SQ G + +FR M REGV+ V+ T V+ C
Sbjct: 231 VFDEMSFKDMISWNSLLSGL--SQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH 288
Query: 244 LRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSS 303
DL+ + IHG G++ + LM Y +C L + +F + ++VV W++
Sbjct: 289 ETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCG-VLEAVKSVFHQMSERNVVSWTT 347
Query: 304 IIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAG 363
+I S + +A+ +F MR + + PN VT + ++++ + GL +H +K G
Sbjct: 348 MI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTG 402
Query: 364 LNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFL 423
+ S+GN+ + +Y+K ++ + + F ++ R+ +SW +ISG+ +G+ EAL++FL
Sbjct: 403 FVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFL 462
Query: 424 EMQESGVEPDAITVLAILSACNHAG--LVKEAETLFNNVMKEKKIALAIEHYACYVDLLG 481
+ P+ T ++L+A A VK+ + +++K + + A +D+
Sbjct: 463 SAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSAL-LDMYA 520
Query: 482 KSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAAN--Y 539
K G I+++ KV + M K + + +S++SA HG E L H++I+ EN A
Sbjct: 521 KRGNIDESEKVFNEMSQK-NQFVWTSIISAYSSHGDFETVMNLFHKMIK---ENVAPDLV 576
Query: 540 TLLSMV--CSESGNWLGAEEVWRVM 562
T LS++ C+ G E++ +M
Sbjct: 577 TFLSVLTACNRKGMVDKGYEIFNMM 601
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 322 bits (825), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 190/575 (33%), Positives = 312/575 (54%), Gaps = 5/575 (0%)
Query: 3 SKHFYEQTLHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDAD 62
S +YE+ L +Y EL S + ++ + SV+ A + G LH ALKSG ++
Sbjct: 184 SHGYYEEALEIY-HELKNSWIVPDSFTVSSVLPAFGNLLVVKQ-GQGLHGFALKSGVNSV 241
Query: 63 PVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYL 122
V++N L++MY KF +P A ++FDEM RD++S+N++I + + S+ MF E L
Sbjct: 242 VVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NL 300
Query: 123 CGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWL 182
F ++ ++ C + +L L + I+ ++ G F L V L+D+Y+KC +
Sbjct: 301 DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAG-FVLESTVRNILIDVYAKCGDMI 359
Query: 183 IALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACA 242
A VF M ++ VSW ++ISG I S + + LF+ M + +T +++
Sbjct: 360 TARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVST 419
Query: 243 ELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWS 302
L DL+ GK +H G D +S AL+ MY +C E +I F D V W+
Sbjct: 420 RLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI-FSSMGTGDTVTWN 478
Query: 303 SIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKA 362
++I + GD + +++ ++MR + P+ T L L C + G +HC +++
Sbjct: 479 TVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF 538
Query: 363 GLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLF 422
G ++ IGNAL+ MYSKCG + +S ++F M+ RD V+WT +I YG +G GE+AL+ F
Sbjct: 539 GYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETF 598
Query: 423 LEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGK 482
+M++SG+ PD++ +AI+ AC+H+GLV E F + KI IEHYAC VDLL +
Sbjct: 599 ADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSR 658
Query: 483 SGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLL 542
S KI A + + MP+KP I +S++ ACR G +E AE ++ ++IE P++ L
Sbjct: 659 SQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILA 718
Query: 543 SMVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
S + W + + ++ K ++K+ G+S IE
Sbjct: 719 SNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIE 753
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 145/439 (33%), Positives = 235/439 (53%), Gaps = 5/439 (1%)
Query: 6 FYEQTLHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVI 65
+ + L Y + L S + + PSVIKACA G ++ L G ++D +
Sbjct: 86 LFPEALEFYGK-LRESKVSPDKYTFPSVIKACA-GLFDAEMGDLVYEQILDMGFESDLFV 143
Query: 66 SNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGF 125
N+L+ MY++ A Q+FDEMP RD +SWNS+I+ ++ +G+Y +LE++ E+
Sbjct: 144 GNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWI 203
Query: 126 VLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIAL 185
V + ++ ++ + ++ G+ +H + V V+ L+ +Y K A
Sbjct: 204 VPDSFTVSSVLPAFGNLLVVKQGQGLHGFAL-KSGVNSVVVVNNGLVAMYLKFRRPTDAR 262
Query: 186 RVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELR 245
RVF++M +R+ VS+ MI G + + + + +F + KP +T++ VL AC LR
Sbjct: 263 RVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLR 321
Query: 246 DLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSII 305
DL K I+ Y GF + + L+ +Y +C + + AR +F + KD V W+SII
Sbjct: 322 DLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMI-TARDVFNSMECKDTVSWNSII 380
Query: 306 RGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLN 365
GY QSGDL EAMKLF M + + + +T L ++S TR + L G G+H +K+G+
Sbjct: 381 SGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGIC 440
Query: 366 FDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEM 425
D+S+ NAL++MY+KCG + S +IF+ M D V+W T+IS G LQ+ +M
Sbjct: 441 IDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQM 500
Query: 426 QESGVEPDAITVLAILSAC 444
++S V PD T L L C
Sbjct: 501 RKSEVVPDMATFLVTLPMC 519
Score = 215 bits (548), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 265/511 (51%), Gaps = 8/511 (1%)
Query: 49 QLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEM-PYRDTISWNSIINCFTQN 107
++H + G D+ S LI Y+ F +P S+ +F + P ++ WNSII F++N
Sbjct: 25 RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKN 84
Query: 108 GFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFV 167
G + +LE + ++ +I C+ + + E+G ++ I+D FE +FV
Sbjct: 85 GLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ-ILDMGFESDLFV 143
Query: 168 STALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGV 227
AL+D+YS+ A +VF++M +R+ VSW ++ISG Y+ ++++ ++ +
Sbjct: 144 GNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWI 203
Query: 228 KPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPAR 287
P T++ VL A L ++ G+ +HG+A G + ++ L+ MY + AR
Sbjct: 204 VPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTD-AR 262
Query: 288 IIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQS 347
+F+ V+D V ++++I GY + + E++++F L++ +P+ +T+ ++L +C
Sbjct: 263 RVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLR 321
Query: 348 FLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLIS 407
LS ++ Y++KAG + ++ N L+++Y+KCG + ++ +FN M +D VSW ++IS
Sbjct: 322 DLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIIS 381
Query: 408 GYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIA 467
GY G EA++LF M + D IT L ++S +K + L +N +K I
Sbjct: 382 GYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS-GIC 440
Query: 468 LAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQ 527
+ + +D+ K G++ D+ K+ S+M T ++++SAC G + Q
Sbjct: 441 IDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTVISACVRFGDFATGLQVTTQ 499
Query: 528 LIEAE--PENAANYTLLSMVCSESGNWLGAE 556
+ ++E P+ A L M S + LG E
Sbjct: 500 MRKSEVVPDMATFLVTLPMCASLAAKRLGKE 530
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 154/305 (50%), Gaps = 1/305 (0%)
Query: 230 TRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARII 289
TRV+ + A + +L + IH G D S L+ Y E +
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF 62
Query: 290 FERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFL 349
+ K+V +W+SIIR +S++G EA++ + ++R ++ P+ T +++ +C
Sbjct: 63 RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA 122
Query: 350 SHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGY 409
G V+ I+ G D+ +GNAL++MYS+ G +T + Q+F+EM RD VSW +LISGY
Sbjct: 123 EMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGY 182
Query: 410 GFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALA 469
HGY EEAL+++ E++ S + PD+ TV ++L A + +VK+ + L +K ++
Sbjct: 183 SSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVV 242
Query: 470 IEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLI 529
+ + V + K + DA +V M ++ S + + ++ E M L
Sbjct: 243 VVNNGL-VAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD 301
Query: 530 EAEPE 534
+ +P+
Sbjct: 302 QFKPD 306
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 321 bits (823), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 185/553 (33%), Positives = 310/553 (56%), Gaps = 4/553 (0%)
Query: 26 NTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQL 85
N V+ CA ++ G+QLH + SG D + I NSL+SMY+K + + A +L
Sbjct: 238 NAVTFDCVLSVCA-SKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKL 296
Query: 86 FDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGEL 145
F M DT++WN +I+ + Q+G SL F EM G + A + ++ S+ L
Sbjct: 297 FRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENL 356
Query: 146 ELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISG 205
E +QIH I+ S L +F+++AL+D Y KC +A +F Q + V +TAMISG
Sbjct: 357 EYCKQIHCY-IMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISG 415
Query: 206 CIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFD 265
+ + Y +++FR + + + P +TL +L L L+ G+ +HG+ GFD
Sbjct: 416 YLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNR 475
Query: 266 HHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMR 325
++ A++ MY +C ++ A IFER +D+V W+S+I +QS + S A+ +F +M
Sbjct: 476 CNIGCAVIDMYAKCGR-MNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMG 534
Query: 326 LERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSIT 385
+ I + V++ A LS+C S G +H +++K L DV + L++MY+KCG++
Sbjct: 535 VSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLK 594
Query: 386 SSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQE-SGVEPDAITVLAILSAC 444
++ +F M ++ VSW ++I+ G HG +++L LF EM E SG+ PD IT L I+S+C
Sbjct: 595 AAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSC 654
Query: 445 NHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRI 504
H G V E F ++ ++ I EHYAC VDL G++G++ +A + V +MP P +
Sbjct: 655 CHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGV 714
Query: 505 LSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNWLGAEEVWRVMRA 564
+L+ ACR+H +E+AE+ + +L++ +P N+ Y L+S + + W +V +M+
Sbjct: 715 WGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKE 774
Query: 565 KGLSKSYGFSRIE 577
+ + K G+S IE
Sbjct: 775 REVQKIPGYSWIE 787
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 157/565 (27%), Positives = 285/565 (50%), Gaps = 20/565 (3%)
Query: 22 GLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPES 81
G+ + + P ++KAC + + L T G D + +++SLI Y ++ K +
Sbjct: 133 GVSPDVSTFPCLVKACVALKNFKGIDF-LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDV 191
Query: 82 AYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQ 141
+LFD + +D + WN ++N + + G ++ F M + A ++S+C+
Sbjct: 192 PSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCAS 251
Query: 142 IGELELGRQIHALVIVDG-SFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWT 200
++LG Q+H LV+V G FE S + +LL +YSKC + A ++F M + V+W
Sbjct: 252 KLLIDLGVQLHGLVVVSGVDFEGS--IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWN 309
Query: 201 AMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCC 260
MISG + S + + F M GV P +T + +L + ++ +L K IH Y
Sbjct: 310 CMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRH 369
Query: 261 GFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKL 320
D L++AL+ Y +C + A+ IF + DVV+++++I GY +G +++++
Sbjct: 370 SISLDIFLTSALIDAYFKC-RGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEM 428
Query: 321 FSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSK 380
F + +I PN +TL++IL L G +H +I+K G + +IG A+++MY+K
Sbjct: 429 FRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAK 488
Query: 381 CGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAI 440
CG + +++IF ++ RD VSW ++I+ A+ +F +M SG+ D +++ A
Sbjct: 489 CGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAA 548
Query: 441 LSACNHAGLVKEA-ETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMK 499
LSAC A L E+ + M + +A + + +D+ K G ++ A V TM K
Sbjct: 549 LSAC--ANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK 606
Query: 500 PSTRILS--SLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMV--CSESGNWLGA 555
I+S S+++AC HG+L+ + L H+++E T L ++ C G+
Sbjct: 607 ---NIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGD---V 660
Query: 556 EEVWRVMRAKGLSKSYGFSRIENEY 580
+E R R+ +++ YG + Y
Sbjct: 661 DEGVRFFRS--MTEDYGIQPQQEHY 683
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 187/358 (52%), Gaps = 14/358 (3%)
Query: 132 LAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQM 191
L+ ++ CS L G+Q+HA +IV+ S + +L +Y+ C + ++F ++
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVN-SISGDSYTDERILGMYAMCGSFSDCGKMFYRL 96
Query: 192 VIRNEV--SWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRN 249
+R W ++IS + + + + + M GV P T ++ AC L++ +
Sbjct: 97 DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKG 156
Query: 250 GKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYS 309
+ G D + ++++L+ Y E + P+++ F+R KD VIW+ ++ GY+
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKL-FDRVLQKDCVIWNVMLNGYA 215
Query: 310 QSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVS 369
+ G L +K FS MR+++I PN+VT +LS C + + G+ +H ++ +G++F+ S
Sbjct: 216 KCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS 275
Query: 370 IGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESG 429
I N+L++MYSKCG + ++F M+ D V+W +ISGY G EE+L F EM SG
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 430 VEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIE 487
V PDAIT ++L + + F N+ K+I I ++ +D+ S I+
Sbjct: 336 VLPDAITFSSLLPSVSK----------FENLEYCKQIHCYIMRHSISLDIFLTSALID 383
Score = 162 bits (410), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 200/411 (48%), Gaps = 5/411 (1%)
Query: 33 VIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYR 92
+++AC+ + G Q+H + + D ++ MYA ++F + R
Sbjct: 41 LLQACSNPNLLRQ-GKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 93 DTI--SWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQ 150
+ WNSII+ F +NG ++L + +M G ++ C + + G
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-GID 158
Query: 151 IHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQ 210
+ + + + FV+++L+ Y + + ++F++++ ++ V W M++G
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 211 NYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSA 270
D+ I F M+ + + P VT VL CA + G +HG G DF+ +
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 278
Query: 271 ALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIE 330
+L+ MY +C A +F D V W+ +I GY QSG + E++ F M +
Sbjct: 279 SLLSMYSKCGR-FDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 331 PNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQI 390
P+++T ++L S ++ L + +HCYIM+ ++ D+ + +AL++ Y KC ++ + I
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNI 397
Query: 391 FNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAIL 441
F++ + D V +T +ISGY +G ++L++F + + + P+ IT+++IL
Sbjct: 398 FSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 448
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 195/574 (33%), Positives = 310/574 (54%), Gaps = 10/574 (1%)
Query: 6 FYEQTLHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVI 65
Y + + Y + + +G+ ++T P VIK+ A + + G ++H +K G +D +
Sbjct: 110 LYIEAVQFYSRMVF-AGVKADTFTYPFVIKSVAGISSLEE-GKKIHAMVIKLGFVSDVYV 167
Query: 66 SNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGF 125
NSLIS+Y K A ++F+EMP RD +SWNS+I+ + G SL +F+EM CGF
Sbjct: 168 CNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGF 227
Query: 126 VLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIAL 185
+ CS + ++G++IH + V V T++LD+YSK A
Sbjct: 228 KPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAE 287
Query: 186 RVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDL-FRAM-QREGVKPTRVTLTIVLLACAE 243
R+F M+ RN V+W MI GC T L F+ M ++ G++P +T +L A A
Sbjct: 288 RIFNGMIQRNIVAWNVMI-GCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAI 346
Query: 244 LRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSS 303
L G+ IHGYA GF L AL+ MY EC + L A +IF+R K+V+ W+S
Sbjct: 347 LE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQ-LKSAEVIFDRMAEKNVISWNS 401
Query: 304 IIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAG 363
II Y Q+G A++LF + + P+S T+ +IL + LS G +H YI+K+
Sbjct: 402 IIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSR 461
Query: 364 LNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFL 423
+ I N+L++MY+ CG + + + FN + +D VSW ++I Y HG+G ++ LF
Sbjct: 462 YWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFS 521
Query: 424 EMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKS 483
EM S V P+ T ++L+AC+ +G+V E F ++ +E I IEHY C +DL+G++
Sbjct: 522 EMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRT 581
Query: 484 GKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLS 543
G A + + MP P+ RI SL++A R H + +AE A Q+ + E +N Y LL
Sbjct: 582 GNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLL 641
Query: 544 MVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
+ +E+G W + +M +KG+S++ S +E
Sbjct: 642 NMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVE 675
Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 146/514 (28%), Positives = 258/514 (50%), Gaps = 17/514 (3%)
Query: 62 DPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMY 121
DP ++ +L +A E A QLFDEM D WN +I FT G Y+ +++ + M
Sbjct: 64 DPALTRALRG-FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 122 LCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHW 181
G +I + I LE G++IHA+VI G F V+V +L+ LY K
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLG-FVSDVYVCNSLISLYMKLGCA 181
Query: 182 LIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLAC 241
A +VFE+M R+ VSW +MISG + + + + LF+ M + G KP R + L AC
Sbjct: 182 WDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGAC 241
Query: 242 AELRDLRNGKAIHGYAYCCGFDF-DHHLSAALMHMYCECTEALHPARIIFERTKVKDVVI 300
+ + + GK IH +A + D + +++ MY + E + R IF +++V
Sbjct: 242 SHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAER-IFNGMIQRNIVA 300
Query: 301 WSSIIRGYSQSGDLSEAMKLFSRMRLER-IEPNSVTLLAILSSCTRQSFLSHGLGVHCYI 359
W+ +I Y+++G +++A F +M + ++P+ +T + +L + S + G +H Y
Sbjct: 301 WNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYA 356
Query: 360 MKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEAL 419
M+ G + + AL++MY +CG + S+ IF+ MA ++ +SW ++I+ Y +G AL
Sbjct: 357 MRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSAL 416
Query: 420 QLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDL 479
+LF E+ +S + PD+ T+ +IL A + + E + ++K + + I V +
Sbjct: 417 ELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTI-ILNSLVHM 475
Query: 480 LGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAE-PENAAN 538
G +EDA K + + +K +S++ A +HG ++ L ++I + N +
Sbjct: 476 YAMCGDLEDARKCFNHILLKDVVS-WNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKST 534
Query: 539 YTLLSMVCSESGNWLGAEEVWRVMRAKGLSKSYG 572
+ L CS SG +E W + + + YG
Sbjct: 535 FASLLAACSISGM---VDEGWEYFES--MKREYG 563
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 319 bits (818), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 183/535 (34%), Positives = 293/535 (54%), Gaps = 8/535 (1%)
Query: 46 FGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFT 105
G Q+HC ALK G D +SNSLI+MY K K A +FD M RD ISWNS+I
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 106 QNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGE-LELGRQIHALVIVDGSFELS 164
QNG V ++ +F ++ CG + ++ S + E L L +Q+H I + S
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS 452
Query: 165 VFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQR 224
FVSTAL+D YS+ A +FE+ + V+W AM++G S + + LF M +
Sbjct: 453 -FVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 225 EGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALH 284
+G + TL V C L + GK +H YA G+D D +S+ ++ MY +C + +
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGD-MS 569
Query: 285 PARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTL--LAILSS 342
A+ F+ V D V W+++I G ++G+ A +FS+MRL + P+ T+ LA SS
Sbjct: 570 AAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASS 629
Query: 343 CTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSW 402
C + L G +H +K D +G +L++MY+KCGSI ++ +F + + +W
Sbjct: 630 CL--TALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAW 687
Query: 403 TTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMK 462
++ G HG G+E LQLF +M+ G++PD +T + +LSAC+H+GLV EA ++
Sbjct: 688 NAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHG 747
Query: 463 EKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAE 522
+ I IEHY+C D LG++G ++ A ++ +M M+ S + +L++ACR+ G E +
Sbjct: 748 DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGK 807
Query: 523 MLAHQLIEAEPENAANYTLLSMVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
+A +L+E EP +++ Y LLS + + + W + +M+ + K GFS IE
Sbjct: 808 RVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIE 862
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 219/448 (48%), Gaps = 9/448 (2%)
Query: 22 GLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPES 81
GL + + SV+KA + Q+H A+K + +D +S +LI Y++ +
Sbjct: 411 GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKE 470
Query: 82 AYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQ 141
A LF+ + D ++WN+++ +TQ+ ++L++F M+ G LA + C
Sbjct: 471 AEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGF 529
Query: 142 IGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTA 201
+ + G+Q+HA I G ++L ++VS+ +LD+Y KC A F+ + + ++V+WT
Sbjct: 530 LFAINQGKQVHAYAIKSG-YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 588
Query: 202 MISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCG 261
MISGCI++ + +F M+ GV P T+ + A + L L G+ IH A
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN 648
Query: 262 FDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLF 321
D + +L+ MY +C ++ A +F+R ++ ++ W++++ G +Q G+ E ++LF
Sbjct: 649 CTNDPFVGTSLVDMYAKCG-SIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLF 707
Query: 322 SRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKA--GLNFDVSIGNALMNMYS 379
+M+ I+P+ VT + +LS+C+ +S H M G+ ++ + L +
Sbjct: 708 KQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYK-HMRSMHGDYGIKPEIEHYSCLADALG 766
Query: 380 KCGSITSSHQIFNEMAARDFVS-WTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVL 438
+ G + + + M+ S + TL++ G E ++ ++ E +EP +
Sbjct: 767 RAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLE--LEPLDSSAY 824
Query: 439 AILSACNHAGLVKEAETLFNNVMKEKKI 466
+LS A + L +MK K+
Sbjct: 825 VLLSNMYAAASKWDEMKLARTMMKGHKV 852
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 187/400 (46%), Gaps = 43/400 (10%)
Query: 51 HCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFY 110
H L + + + N+LISMY+K A ++FD+MP RD +SWNSI+ + Q+
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 111 VRSLEMFREMYLCGFVLKAEL-------LAGIISLCSQIGELELGRQIHALVIVDGSFEL 163
V +E ++ +L +L+ ++ L+ ++ LC G + H G +
Sbjct: 122 V--VENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG-LDG 178
Query: 164 SVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQ 223
FV+ AL+++Y K +FE+M R+ V W M+ ++ + IDL A
Sbjct: 179 DEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH 238
Query: 224 REGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEAL 283
G+ P +TL ++ A G D D A + + +A
Sbjct: 239 SSGLNPNEITLRLL-------------------ARISGDDSD----AGQVKSFANGNDAS 275
Query: 284 HPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSC 343
+ IIF + + Y SG S +K F+ M +E + VT + +L++
Sbjct: 276 SVSEIIFRNKGLSE----------YLHSGQYSALLKCFADMVESDVECDQVTFILMLATA 325
Query: 344 TRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWT 403
+ L+ G VHC +K GL+ +++ N+L+NMY K + +F+ M+ RD +SW
Sbjct: 326 VKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWN 385
Query: 404 TLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSA 443
++I+G +G EA+ LF+++ G++PD T+ ++L A
Sbjct: 386 SVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/514 (23%), Positives = 226/514 (43%), Gaps = 57/514 (11%)
Query: 18 LHPSGLYSNTAILPSVIKAC---AYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYA 74
L +Y++ L ++K C Y + F H A K G D D ++ +L+++Y
Sbjct: 136 LRQDVVYTSRMTLSPMLKLCLHSGYVWASESF----HGYACKIGLDGDEFVAGALVNIYL 191
Query: 75 KFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGF---VLKAEL 131
KF K + LF+EMPYRD + WN ++ + + GF ++++ + G + L
Sbjct: 192 KFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRL 251
Query: 132 LAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQM 191
LA I S G+++ +G+ SV ++
Sbjct: 252 LARISGDDSDAGQVK--------SFANGNDASSV-----------------------SEI 280
Query: 192 VIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGK 251
+ RN+ +S + S Y + F M V+ +VT ++L ++ L G+
Sbjct: 281 IFRNK-----GLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQ 335
Query: 252 AIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQS 311
+H A G D +S +L++MYC+ + AR +F+ +D++ W+S+I G +Q+
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKLRK-FGFARTVFDNMSERDLISWNSVIAGIAQN 394
Query: 312 GDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLG----VHCYIMKAGLNFD 367
G EA+ LF ++ ++P+ T+ ++L + S L GL VH + +K D
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAA---SSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 368 VSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQE 427
+ AL++ YS+ + + +F E D V+W +++GY G + L+LF M +
Sbjct: 452 SFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 428 SGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIE 487
G D T+ + C + + + + +K L + + +D+ K G +
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS-GYDLDLWVSSGILDMYVKCGDMS 569
Query: 488 DACKVVSTMPMKPSTRILSSLVSACRIHGRLEVA 521
A ++P+ P ++++S C +G E A
Sbjct: 570 AAQFAFDSIPV-PDDVAWTTMISGCIENGEEERA 602
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 9/214 (4%)
Query: 246 DLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSII 305
DL GK H + + L L+ MY +C +L AR +F++ +D+V W+SI+
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCG-SLTYARRVFDKMPDRDLVSWNSIL 112
Query: 306 RGYSQSG-----DLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIM 360
Y+QS ++ +A LF +R + + + +TL +L C ++ H Y
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC 172
Query: 361 KAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQ 420
K GL+ D + AL+N+Y K G + +F EM RD V W ++ Y G+ EEA+
Sbjct: 173 KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 232
Query: 421 LFLEMQESGVEPDAIT--VLAILSACN-HAGLVK 451
L SG+ P+ IT +LA +S + AG VK
Sbjct: 233 LSSAFHSSGLNPNEITLRLLARISGDDSDAGQVK 266
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 10/170 (5%)
Query: 337 LAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAA 396
L + S L G H I+ N + + N L++MYSKCGS+T + ++F++M
Sbjct: 43 FGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPD 102
Query: 397 RDFVSWTTLISGYGFHGYG-----EEALQLFLEMQESGVEPDAITVLAILSACNHAGLVK 451
RD VSW ++++ Y ++A LF +++ V +T+ +L C H+G V
Sbjct: 103 RDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVW 162
Query: 452 EAETLFNNVMKEKKIALAIEHY--ACYVDLLGKSGKIEDACKVVSTMPMK 499
+E+ KI L + + V++ K GK+++ + MP +
Sbjct: 163 ASESFHGYAC---KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR 209
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 319 bits (817), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 300/529 (56%), Gaps = 3/529 (0%)
Query: 50 LHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGF 109
LH A+ G D D + NS++++Y K A LFD+M RD +SWN++I+ + G
Sbjct: 166 LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGN 225
Query: 110 YVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVST 169
L++ M G + +S+ + +LE+GR +H ++ G F++ + + T
Sbjct: 226 MSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTG-FDVDMHLKT 284
Query: 170 ALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKP 229
AL+ +Y KC + RV E + ++ V WT MISG + + + +F M + G
Sbjct: 285 ALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDL 344
Query: 230 TRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARII 289
+ + V+ +CA+L G ++HGY G+ D +L+ MY +C L + +I
Sbjct: 345 SSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGH-LDKSLVI 403
Query: 290 FERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEP-NSVTLLAILSSCTRQSF 348
FER +D+V W++II GY+Q+ DL +A+ LF M+ + ++ +S T++++L +C+
Sbjct: 404 FERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGA 463
Query: 349 LSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISG 408
L G +HC ++++ + + AL++MYSKCG + ++ + F+ ++ +D VSW LI+G
Sbjct: 464 LPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAG 523
Query: 409 YGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIAL 468
YGFHG G+ AL+++ E SG+EP+ + LA+LS+C+H G+V++ +F++++++ +
Sbjct: 524 YGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEP 583
Query: 469 AIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQL 528
EH AC VDLL ++ +IEDA K +PS +L ++ ACR +G+ EV +++ +
Sbjct: 584 NHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDM 643
Query: 529 IEAEPENAANYTLLSMVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
IE +P +A +Y L + W E W MR+ GL K G+S+IE
Sbjct: 644 IELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIE 692
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 168/551 (30%), Positives = 280/551 (50%), Gaps = 21/551 (3%)
Query: 7 YEQTLHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVIS 66
++Q L + L + L +T PS++KACA Q FGL +H L +G +D IS
Sbjct: 27 HKQVLSTFSSML-ANKLLPDTFTFPSLLKACASLQ-RLSFGLSIHQQVLVNGFSSDFYIS 84
Query: 67 NSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGF- 125
+SL+++YAKF A ++F+EM RD + W ++I C+++ G + + EM G
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIK 144
Query: 126 ---VLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWL 182
V E+L+G++ +I +L+ +H ++ G F+ + V ++L+LY KC H
Sbjct: 145 PGPVTLLEMLSGVL----EITQLQC---LHDFAVIYG-FDCDIAVMNSMLNLYCKCDHVG 196
Query: 183 IALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACA 242
A +F+QM R+ VSW MISG N + L M+ +G++P + T L
Sbjct: 197 DAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSG 256
Query: 243 ELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWS 302
+ DL G+ +H GFD D HL AL+ MY +C + R++ E KDVV W+
Sbjct: 257 TMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVL-ETIPNKDVVCWT 315
Query: 303 SIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKA 362
+I G + G +A+ +FS M + +S + ++++SC + G VH Y+++
Sbjct: 316 VMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRH 375
Query: 363 GLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLF 422
G D N+L+ MY+KCG + S IF M RD VSW +ISGY + +AL LF
Sbjct: 376 GYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLF 435
Query: 423 LEMQESGVEP-DAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLG 481
EM+ V+ D+ TV+++L AC+ AG + + + V++ ++ A VD+
Sbjct: 436 EEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTA-LVDMYS 494
Query: 482 KSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEA--EPENAANY 539
K G +E A + ++ K L++ HG+ ++A + + + + EP +
Sbjct: 495 KCGYLEAAQRCFDSISWKDVVS-WGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFL 553
Query: 540 TLLSMVCSESG 550
+LS CS +G
Sbjct: 554 AVLS-SCSHNG 563
Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 191/353 (54%), Gaps = 7/353 (1%)
Query: 97 WNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVI 156
+NS IN + +G + + L F M + ++ C+ + L G IH V+
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 157 VDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQN-YDTG 215
V+G F ++S++L++LY+K A +VFE+M R+ V WTAMI GC
Sbjct: 74 VNG-FSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMI-GCYSRAGIVGEA 131
Query: 216 IDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHM 275
L M+ +G+KP VTL +L E+ L + +H +A GFD D + +++++
Sbjct: 132 CSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNL 188
Query: 276 YCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVT 335
YC+C + + A+ +F++ + +D+V W+++I GY+ G++SE +KL RMR + + P+ T
Sbjct: 189 YCKC-DHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQT 247
Query: 336 LLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMA 395
A LS L G +HC I+K G + D+ + AL+ MY KCG +S+++ +
Sbjct: 248 FGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIP 307
Query: 396 ARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAG 448
+D V WT +ISG G E+AL +F EM +SG + + + +++++C G
Sbjct: 308 NKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLG 360
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 164/315 (52%), Gaps = 13/315 (4%)
Query: 47 GLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQ 106
G LHC +K+G D D + +LI+MY K K E++Y++ + +P +D + W +I+ +
Sbjct: 264 GRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMR 323
Query: 107 NGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVF 166
G ++L +F EM G L +E +A +++ C+Q+G +LG +H V+ G + L
Sbjct: 324 LGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHG-YTLDTP 382
Query: 167 VSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREG 226
+L+ +Y+KC H +L +FE+M R+ VSW A+ISG + + + LF M+ +
Sbjct: 383 ALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKT 442
Query: 227 VKPT-RVTLTIVLLACAELRDLRNGKAIH-----GYAYCCGFDFDHHLSAALMHMYCECT 280
V+ T+ +L AC+ L GK IH + C + AL+ MY +C
Sbjct: 443 VQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSL-----VDTALVDMYSKCG 497
Query: 281 EALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAIL 340
L A+ F+ KDVV W +I GY G A++++S +EPN V LA+L
Sbjct: 498 -YLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVL 556
Query: 341 SSCTRQSFLSHGLGV 355
SSC+ + GL +
Sbjct: 557 SSCSHNGMVQQGLKI 571
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 98/223 (43%), Gaps = 22/223 (9%)
Query: 32 SVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPY 91
S+++AC+ A G +HC ++S ++ +L+ MY+K E+A + FD + +
Sbjct: 453 SLLQACSSAGALP-VGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISW 511
Query: 92 RDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQI 151
+D +SW +I + +G +LE++ E G + ++S CS G ++ G +I
Sbjct: 512 KDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKI 571
Query: 152 HALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQN 211
+ ++ D E + ++DL + A + +++ R + +I
Sbjct: 572 FSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGII-------- 623
Query: 212 YDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIH 254
+D RA + V+ + C ++ +L+ G A H
Sbjct: 624 ----LDACRANGKTEVED---------IICEDMIELKPGDAGH 653
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 319 bits (817), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 307/573 (53%), Gaps = 6/573 (1%)
Query: 9 QTLHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNS 68
+ + LY + L L + S+IKACA + + G QLH +K S + + N+
Sbjct: 151 EAIRLYLKMLQED-LVPDQFAFGSIIKACA-SSSDVGLGKQLHAQVIKLESSSHLIAQNA 208
Query: 69 LISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLK 128
LI+MY +F++ A ++F +P +D ISW+SII F+Q GF +L +EM G
Sbjct: 209 LIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHP 268
Query: 129 AELLAGI-ISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRV 187
E + G + CS + + G QIH L I + +L D+Y++C A RV
Sbjct: 269 NEYIFGSSLKACSSLLRPDYGSQIHGLCI-KSELAGNAIAGCSLCDMYARCGFLNSARRV 327
Query: 188 FEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDL 247
F+Q+ + SW +I+G ++ D + +F M+ G P ++L +L A + L
Sbjct: 328 FDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMAL 387
Query: 248 RNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVK-DVVIWSSIIR 306
G IH Y GF D + +L+ MY C++ L+ +FE + D V W++I+
Sbjct: 388 SQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSD-LYCCFNLFEDFRNNADSVSWNTILT 446
Query: 307 GYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNF 366
Q E ++LF M + EP+ +T+ +L C S L G VHCY +K GL
Sbjct: 447 ACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAP 506
Query: 367 DVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQ 426
+ I N L++MY+KCGS+ + +IF+ M RD VSW+TLI GY G+GEEAL LF EM+
Sbjct: 507 EQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMK 566
Query: 427 ESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKI 486
+G+EP+ +T + +L+AC+H GLV+E L+ + E I+ EH +C VDLL ++G++
Sbjct: 567 SAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRL 626
Query: 487 EDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVC 546
+A + + M ++P + +L+SAC+ G + +A+ A +++ +P N+ + LL +
Sbjct: 627 NEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMH 686
Query: 547 SESGNWLGAEEVWRVMRAKGLSKSYGFSRIENE 579
+ SGNW A + M+ + K G S IE E
Sbjct: 687 ASSGNWENAALLRSSMKKHDVKKIPGQSWIEIE 719
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 236/501 (47%), Gaps = 12/501 (2%)
Query: 1 MVSKHFYEQTLHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSD 60
+ +FY + L + S S+I AC+ +++ G ++H L S
Sbjct: 41 LCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQ-GRKIHDHILNSNCK 99
Query: 61 ADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREM 120
D +++N ++SMY K A ++FD MP R+ +S+ S+I ++QNG ++ ++ +M
Sbjct: 100 YDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKM 159
Query: 121 YLCGFVLKAELLAGIISLCSQIGELELGRQIHALVI-VDGSFELSVFVSTALLDLYSKCH 179
V II C+ ++ LG+Q+HA VI ++ S L AL+ +Y + +
Sbjct: 160 LQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHL--IAQNALIAMYVRFN 217
Query: 180 HWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGV-KPTRVTLTIVL 238
A RVF + +++ +SW+++I+G + + M GV P L
Sbjct: 218 QMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSL 277
Query: 239 LACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDV 298
AC+ L G IHG + +L MY C L+ AR +F++ + D
Sbjct: 278 KACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCG-FLNSARRVFDQIERPDT 336
Query: 299 VIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCY 358
W+ II G + +G EA+ +FS+MR P++++L ++L + T+ LS G+ +H Y
Sbjct: 337 ASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSY 396
Query: 359 IMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAAR-DFVSWTTLISGYGFHGYGEE 417
I+K G D+++ N+L+ MY+ C + +F + D VSW T+++ H E
Sbjct: 397 IIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVE 456
Query: 418 ALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHY--AC 475
L+LF M S EPD IT+ +L C +K + + K LA E +
Sbjct: 457 MLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSL---KTGLAPEQFIKNG 513
Query: 476 YVDLLGKSGKIEDACKVVSTM 496
+D+ K G + A ++ +M
Sbjct: 514 LIDMYAKCGSLGQARRIFDSM 534
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 129/256 (50%), Gaps = 3/256 (1%)
Query: 192 VIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLL-ACAELRDLRNG 250
I+ E I+ S Y ++ F Q+ R+ I L+ AC+ R L G
Sbjct: 27 TIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQG 86
Query: 251 KAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQ 310
+ IH + +D L+ ++ MY +C +L AR +F+ +++V ++S+I GYSQ
Sbjct: 87 RKIHDHILNSNCKYDTILNNHILSMYGKCG-SLRDAREVFDFMPERNLVSYTSVITGYSQ 145
Query: 311 SGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSI 370
+G +EA++L+ +M E + P+ +I+ +C S + G +H ++K + +
Sbjct: 146 NGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIA 205
Query: 371 GNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGV 430
NAL+ MY + ++ + ++F + +D +SW+++I+G+ G+ EAL EM GV
Sbjct: 206 QNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGV 265
Query: 431 -EPDAITVLAILSACN 445
P+ + L AC+
Sbjct: 266 FHPNEYIFGSSLKACS 281
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 94/165 (56%), Gaps = 1/165 (0%)
Query: 335 TLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEM 394
T ++++ +C+ L+ G +H +I+ + +D + N +++MY KCGS+ + ++F+ M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 395 AARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAE 454
R+ VS+T++I+GY +G G EA++L+L+M + + PD +I+ AC + V +
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 455 TLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMK 499
L V+K + + I A + + + ++ DA +V +PMK
Sbjct: 189 QLHAQVIKLESSSHLIAQNA-LIAMYVRFNQMSDASRVFYGIPMK 232
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 316 bits (810), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 187/574 (32%), Positives = 316/574 (55%), Gaps = 10/574 (1%)
Query: 6 FYEQTLHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVI 65
++++ + LY + L G+ + P V++ C G ++H ++ G + D +
Sbjct: 175 YFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR-GKEVHVHVVRYGYELDIDV 233
Query: 66 SNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGF 125
N+LI+MY K +SA LFD MP RD ISWN++I+ + +NG LE+F M G
Sbjct: 234 VNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMR--GL 291
Query: 126 VLKAEL--LAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLI 183
+ +L L +IS C +G+ LGR IHA VI G F + + V +L +Y W
Sbjct: 292 SVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTG-FAVDISVCNSLTQMYLNAGSWRE 350
Query: 184 ALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAE 243
A ++F +M ++ VSWT MISG + D ID +R M ++ VKP +T+ VL ACA
Sbjct: 351 AEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACAT 410
Query: 244 LRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSS 303
L DL G +H A ++ L++MY +C + + A IF K+V+ W+S
Sbjct: 411 LGDLDTGVELHKLAIKARLISYVIVANNLINMYSKC-KCIDKALDIFHNIPRKNVISWTS 469
Query: 304 IIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAG 363
II G + EA+ +M++ ++PN++TL A L++C R L G +H ++++ G
Sbjct: 470 IIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTG 528
Query: 364 LNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFL 423
+ D + NAL++MY +CG + ++ FN +D SW L++GY G G ++LF
Sbjct: 529 VGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFD 587
Query: 424 EMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKS 483
M +S V PD IT +++L C+ + +V++ F+ M++ + ++HYAC VDLLG++
Sbjct: 588 RMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSK-MEDYGVTPNLKHYACVVDLLGRA 646
Query: 484 GKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLS 543
G++++A K + MP+ P + +L++ACRIH ++++ E+ A + E + ++ Y LL
Sbjct: 647 GELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLC 706
Query: 544 MVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
+ ++ G W +V R+M+ GL+ G S +E
Sbjct: 707 NLYADCGKWREVAKVRRMMKENGLTVDAGCSWVE 740
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 217/406 (53%), Gaps = 5/406 (1%)
Query: 29 ILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDE 88
+ ++++ C + + + G +++ AL S S + N+ ++M+ +F A+ +F +
Sbjct: 96 VFVALVRLCEWKRAQEE-GSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGK 154
Query: 89 MPYRDTISWNSIINCFTQNGFYVRSLEMF-REMYLCGFVLKAELLAGIISLCSQIGELEL 147
M R+ SWN ++ + + G++ ++ ++ R +++ G ++ C I +L
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214
Query: 148 GRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCI 207
G+++H V+ G +EL + V AL+ +Y KC A +F++M R+ +SW AMISG
Sbjct: 215 GKEVHVHVVRYG-YELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYF 273
Query: 208 DSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHH 267
++ G++LF AM+ V P +TLT V+ AC L D R G+ IH Y GF D
Sbjct: 274 ENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 268 LSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLE 327
+ +L MY + A +F R + KD+V W+++I GY + +A+ + M +
Sbjct: 334 VCNSLTQMYLNAG-SWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQD 392
Query: 328 RIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSS 387
++P+ +T+ A+LS+C L G+ +H +KA L V + N L+NMYSKC I +
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKA 452
Query: 388 HQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPD 433
IF+ + ++ +SWT++I+G + EAL +FL + ++P+
Sbjct: 453 LDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPN 497
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 215/423 (50%), Gaps = 5/423 (1%)
Query: 107 NGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVF 166
NG ++++ M + ++ ++ LC E G +++++ + S L V
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS-SLGVE 130
Query: 167 VSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLF-RAMQRE 225
+ A L ++ + + + A VF +M RN SW ++ G +D + L+ R +
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 226 GVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHP 285
GVKP T VL C + DL GK +H + G++ D + AL+ MY +C + +
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGD-VKS 249
Query: 286 ARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTR 345
AR++F+R +D++ W+++I GY ++G E ++LF MR ++P+ +TL +++S+C
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309
Query: 346 QSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTL 405
G +H Y++ G D+S+ N+L MY GS + ++F+ M +D VSWTT+
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369
Query: 406 ISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKK 465
ISGY ++ ++A+ + M + V+PD ITV A+LSAC G + L +K +
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 466 IALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLA 525
I+ I +++ K I+ A + +P K + +S+++ R++ R A +
Sbjct: 430 ISYVIVANN-LINMYSKCKCIDKALDIFHNIPRK-NVISWTSIIAGLRLNNRCFEALIFL 487
Query: 526 HQL 528
Q+
Sbjct: 488 RQM 490
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 316 bits (810), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 193/570 (33%), Positives = 307/570 (53%), Gaps = 14/570 (2%)
Query: 11 LHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLI 70
L ++K+ H SG+ N + SVI AC Q+H KSG D ++ +LI
Sbjct: 336 LEIFKEMRH-SGVEINNCTVTSVISACGRPSMVCE-ASQVHAWVFKSGFYLDSSVAAALI 393
Query: 71 SMYAKFSKPESAYQLFDEMPYRDTISWNSIINC----FTQNGFYVRSLEMFREMYLCGFV 126
SMY+K + + Q+F+++ D I +I+N F+Q+ +++ +F M G
Sbjct: 394 SMYSKSGDIDLSEQVFEDL---DDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEG-- 448
Query: 127 LKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALR 186
L+ + + + SL S + L LG+Q+H + G L + V ++L LYSKC + +
Sbjct: 449 LRTDEFS-VCSLLSVLDCLNLGKQVHGYTLKSG-LVLDLTVGSSLFTLYSKCGSLEESYK 506
Query: 187 VFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRD 246
+F+ + ++ W +MISG + I LF M +G P TL VL C+
Sbjct: 507 LFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPS 566
Query: 247 LRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIR 306
L GK IHGY G D L +AL++MY +C +L AR +++R D V SS+I
Sbjct: 567 LPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCG-SLKLARQVYDRLPELDPVSCSSLIS 625
Query: 307 GYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNF 366
GYSQ G + + LF M + +S + +IL + S G VH YI K GL
Sbjct: 626 GYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCT 685
Query: 367 DVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQ 426
+ S+G++L+ MYSK GSI + F+++ D ++WT LI+ Y HG EALQ++ M+
Sbjct: 686 EPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMK 745
Query: 427 ESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKI 486
E G +PD +T + +LSAC+H GLV+E+ N+++K+ I HY C VD LG+SG++
Sbjct: 746 EKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRL 805
Query: 487 EDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVC 546
+A ++ M +KP + +L++AC+IHG +E+ ++ A + IE EP +A Y LS +
Sbjct: 806 REAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNIL 865
Query: 547 SESGNWLGAEEVWRVMRAKGLSKSYGFSRI 576
+E G W EE ++M+ G+ K G+S +
Sbjct: 866 AEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 153/533 (28%), Positives = 279/533 (52%), Gaps = 25/533 (4%)
Query: 5 HFYEQTLHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPV 64
+E++L + + +H G +N SVI AC+ Q F + C +K G V
Sbjct: 129 RLFEESLRFFSK-MHFLGFEANEISYGSVISACSALQA-PLFSELVCCHTIKMGYFFYEV 186
Query: 65 ISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCG 124
+ ++LI +++K + E AY++F + + WN+II +N Y ++F EM +
Sbjct: 187 VESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGF 246
Query: 125 FVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIA 184
+ + +++ C+ + +L G+ + A VI G+ + VFV TA++DLY+KC H A
Sbjct: 247 QKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAED--VFVCTAIVDLYAKCGHMAEA 304
Query: 185 LRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAEL 244
+ VF ++ + VSWT M+SG S + + +++F+ M+ GV+ T+T V+ AC
Sbjct: 305 MEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRP 364
Query: 245 RDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSI 304
+ +H + + GF D ++AAL+ MY + + ++ + ++ I + +
Sbjct: 365 SMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVM 424
Query: 305 IRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILS--SCTRQSFLSHGLGVHCYIMKA 362
I +SQS +A++LF+RM E + + ++ ++LS C L+ G VH Y +K+
Sbjct: 425 ITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDC-----LNLGKQVHGYTLKS 479
Query: 363 GLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLF 422
GL D+++G++L +YSKCGS+ S+++F + +D W ++ISG+ +GY EA+ LF
Sbjct: 480 GLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLF 539
Query: 423 LEMQESGVEPDAITVLAILSAC-NHAGLVKEAE----TLFNNVMKEKKIALAIEHYACYV 477
EM + G PD T+ A+L+ C +H L + E TL + K + A+ V
Sbjct: 540 SEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSAL------V 593
Query: 478 DLLGKSGKIEDACKVVSTMP-MKPSTRILSSLVSACRIHGRLEVAEMLAHQLI 529
++ K G ++ A +V +P + P + SSL+S HG ++ +L ++
Sbjct: 594 NMYSKCGSLKLARQVYDRLPELDPVS--CSSLISGYSQHGLIQDGFLLFRDMV 644
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 141/513 (27%), Positives = 248/513 (48%), Gaps = 16/513 (3%)
Query: 62 DPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMY 121
D ++ SL+S Y+ A +LFD +P D +S N +I+ + Q+ + SL F +M+
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 122 LCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHW 181
GF +IS CS + + I G F V V +AL+D++SK +
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEV-VESALIDVFSKNLRF 201
Query: 182 LIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLAC 241
A +VF + N W +I+G + +QNY DLF M KP T + VL AC
Sbjct: 202 EDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAAC 261
Query: 242 AELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIW 301
A L LR GK + CG + D + A++ +Y +C + A +F R VV W
Sbjct: 262 ASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGH-MAEAMEVFSRIPNPSVVSW 319
Query: 302 SSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMK 361
+ ++ GY++S D A+++F MR +E N+ T+ +++S+C R S + VH ++ K
Sbjct: 320 TVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFK 379
Query: 362 AGLNFDVSIGNALMNMYSKCGSITSSHQIF---NEMAARDFVSWTTLISGYGFHGYGEEA 418
+G D S+ AL++MYSK G I S Q+F +++ ++ V+ +I+ + +A
Sbjct: 380 SGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKA 437
Query: 419 LQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVD 478
++LF M + G+ D +V ++LS + L K+ + + + L + +
Sbjct: 438 IRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQV----HGYTLKSGLVLDLTVGSSLFT 493
Query: 479 LLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIE--AEPENA 536
L K G +E++ K+ +P K + +S++S +G L A L ++++ P+ +
Sbjct: 494 LYSKCGSLEESYKLFQGIPFKDNA-CWASMISGFNEYGYLREAIGLFSEMLDDGTSPDES 552
Query: 537 ANYTLLSMVCSESGNWLGAEEVWRVMRAKGLSK 569
+L+ VCS + +E+ G+ K
Sbjct: 553 TLAAVLT-VCSSHPSLPRGKEIHGYTLRAGIDK 584
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 9/133 (6%)
Query: 364 LNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFL 423
L FDV + +L++ YS GS+ + ++F+ + D VS +ISGY H EE+L+ F
Sbjct: 80 LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFS 139
Query: 424 EMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHY----ACYVDL 479
+M G E + I+ +++SAC+ LF+ ++ I + Y + +D+
Sbjct: 140 KMHFLGFEANEISYGSVISACSAL-----QAPLFSELVCCHTIKMGYFFYEVVESALIDV 194
Query: 480 LGKSGKIEDACKV 492
K+ + EDA KV
Sbjct: 195 FSKNLRFEDAYKV 207
>sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containing protein At3g05240
OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2
Length = 565
Score = 313 bits (803), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 178/546 (32%), Positives = 293/546 (53%), Gaps = 18/546 (3%)
Query: 49 QLHCTALKSGSDADPVISNSLISMYAKFSKPES-----AYQLFDEMPYRDTISWNSIINC 103
QLH +KS + + + LI + PE+ A +F+ + WNS+I
Sbjct: 24 QLHGLMIKSSVIRNVIPLSRLIDFCT--TCPETMNLSYARSVFESIDCPSVYIWNSMIRG 81
Query: 104 FTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFEL 163
++ + ++L ++EM G+ ++ CS + +++ G +H V+ G FE+
Sbjct: 82 YSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTG-FEV 140
Query: 164 SVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQ 223
+++VST LL +Y C LRVFE + N V+W ++ISG +++ + I+ FR MQ
Sbjct: 141 NMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQ 200
Query: 224 REGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFD--------FDHHLSAALMHM 275
GVK + +L+AC +D+ GK HG+ GFD F+ L+ +L+ M
Sbjct: 201 SNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDM 260
Query: 276 YCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVT 335
Y +C + L AR +F+ + +V W+SII GYSQ+GD EA+ +F M I P+ VT
Sbjct: 261 YAKCGD-LRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVT 319
Query: 336 LLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMA 395
L+++ + Q G +H Y+ K G D +I AL+NMY+K G S+ + F ++
Sbjct: 320 FLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE 379
Query: 396 ARDFVSWTTLISGYGFHGYGEEALQLFLEMQESG-VEPDAITVLAILSACNHAGLVKEAE 454
+D ++WT +I G HG+G EAL +F MQE G PD IT L +L AC+H GLV+E +
Sbjct: 380 KKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQ 439
Query: 455 TLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRI 514
F + + +EHY C VD+L ++G+ E+A ++V TMP+KP+ I +L++ C I
Sbjct: 440 RYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDI 499
Query: 515 HGRLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNWLGAEEVWRVMRAKGLSKSYGFS 574
H LE+ + + + E E + Y LLS + +++G W + + M++K + K G S
Sbjct: 500 HENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHS 559
Query: 575 RIENEY 580
+E +
Sbjct: 560 SVETMF 565
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/477 (24%), Positives = 230/477 (48%), Gaps = 28/477 (5%)
Query: 13 LYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISM 72
++ QE+ G + P V+KAC+ + Q FG +H +K+G + + +S L+ M
Sbjct: 93 IFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQ-FGSCVHGFVVKTGFEVNMYVSTCLLHM 151
Query: 73 YAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELL 132
Y + ++F+++P + ++W S+I+ F N + ++E FREM G ++
Sbjct: 152 YMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIM 211
Query: 133 AGIISLCSQIGELELGRQIHALVI---VDGSFE----LSVFVSTALLDLYSKCHHWLIAL 185
++ C + ++ G+ H + D F+ +V ++T+L+D+Y+KC A
Sbjct: 212 VDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTAR 271
Query: 186 RVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLA----- 240
+F+ M R VSW ++I+G + + + + +F M G+ P +VT V+ A
Sbjct: 272 YLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQG 331
Query: 241 CAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVI 300
C++L G++IH Y GF D + AL++MY + +A A+ FE + KD +
Sbjct: 332 CSQL-----GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDA-ESAKKAFEDLEKKDTIA 385
Query: 301 WSSIIRGYSQSGDLSEAMKLFSRMRLE-RIEPNSVTLLAILSSCTRQSFLSHGLGVHCYI 359
W+ +I G + G +EA+ +F RM+ + P+ +T L +L +C+ + G +
Sbjct: 386 WTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEM 445
Query: 360 MKA-GLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVS-WTTLISGYGFHGYGEE 417
GL V ++++ S+ G + ++ M + V+ W L++G H E
Sbjct: 446 RDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIH----E 501
Query: 418 ALQLFLEMQESGVEPDAI-TVLAILSACNHAGLVKEAET-LFNNVMKEKKIALAIEH 472
L+L ++ EP+ + + + +L + +A + A+ L MK K++ + H
Sbjct: 502 NLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGH 558
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 312 bits (800), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 187/576 (32%), Positives = 308/576 (53%), Gaps = 21/576 (3%)
Query: 16 QELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAK 75
+E+ + N L + KA + Q+ G Q H +K S D + SL+ MY K
Sbjct: 107 REMRAQDILPNAYTLAGIFKAESSLQSST-VGRQAHALVVKMSSFGDIYVDTSLVGMYCK 165
Query: 76 FSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAE----- 130
E ++F MP R+T +W+++++ + G ++++F F+ + E
Sbjct: 166 AGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNL-----FLREKEEGSDS 220
Query: 131 --LLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVF 188
+ ++S + + LGRQIH + I +G V +S AL+ +YSKC A ++F
Sbjct: 221 DYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF-VALSNALVTMYSKCESLNEACKMF 279
Query: 189 EQMVIRNEVSWTAMISGCIDSQNYDT--GIDLFRAMQREGVKPTRVTLTIVLLACAELRD 246
+ RN ++W+AM++G SQN ++ + LF M G+KP+ T+ VL AC+++
Sbjct: 280 DSSGDRNSITWSAMVTGY--SQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICY 337
Query: 247 LRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIR 306
L GK +H + GF+ + AL+ MY + L AR F+ + +DV +W+S+I
Sbjct: 338 LEEGKQLHSFLLKLGFERHLFATTALVDMYAKAG-CLADARKGFDCLQERDVALWTSLIS 396
Query: 307 GYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNF 366
GY Q+ D EA+ L+ RM+ I PN T+ ++L +C+ + L G VH + +K G
Sbjct: 397 GYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGL 456
Query: 367 DVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQ 426
+V IG+AL MYSKCGS+ + +F +D VSW +ISG +G G+EAL+LF EM
Sbjct: 457 EVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEML 516
Query: 427 ESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKI 486
G+EPD +T + I+SAC+H G V+ FN + + + ++HYAC VDLL ++G++
Sbjct: 517 AEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQL 576
Query: 487 EDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVC 546
++A + + + + + L+SAC+ HG+ E+ +L+ ++ Y LS +
Sbjct: 577 KEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIY 636
Query: 547 SESGNWLGAEEVWRVMRAKGLSKSYGFSRIE--NEY 580
+ G E VW+ MRA G+SK G S IE N+Y
Sbjct: 637 TALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQY 672
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 158/545 (28%), Positives = 277/545 (50%), Gaps = 19/545 (3%)
Query: 18 LHPSGLYSNTAILP---SVIKACAYAQTHQHF--GLQLHCTALKSGSDADPVISNSLISM 72
+HPS T + P +++K + ++ G +H +++G+ +N L++
Sbjct: 1 MHPSTF--QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNF 58
Query: 73 YAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRS---LEMFREMYLCGFVLKA 129
YAK K A+ +F+ + +D +SWNS+I ++QNG S +++FREM + A
Sbjct: 59 YAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNA 118
Query: 130 ELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFE 189
LAGI S + +GRQ HALV+ SF ++V T+L+ +Y K L+VF
Sbjct: 119 YTLAGIFKAESSLQSSTVGRQAHALVVKMSSFG-DIYVDTSLVGMYCKAGLVEDGLKVFA 177
Query: 190 QMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVK--PTRVTLTIVLLACAELRDL 247
M RN +W+ M+SG + I +F RE + + T VL + A +
Sbjct: 178 YMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYV 237
Query: 248 RNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRG 307
G+ IH G LS AL+ MY +C E+L+ A +F+ + ++ + WS+++ G
Sbjct: 238 GLGRQIHCITIKNGLLGFVALSNALVTMYSKC-ESLNEACKMFDSSGDRNSITWSAMVTG 296
Query: 308 YSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFD 367
YSQ+G+ EA+KLFSRM I+P+ T++ +L++C+ +L G +H +++K G
Sbjct: 297 YSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERH 356
Query: 368 VSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQE 427
+ AL++MY+K G + + + F+ + RD WT+LISGY + EEAL L+ M+
Sbjct: 357 LFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKT 416
Query: 428 SGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIE 487
+G+ P+ T+ ++L AC+ ++ + + + +K L + + + K G +E
Sbjct: 417 AGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH-GFGLEVPIGSALSTMYSKCGSLE 475
Query: 488 DACKVVSTMPMKPSTRILSSLVSACRIHGRLEVA-EMLAHQLIEA-EPENAANYTLLSMV 545
D V P K ++++S +G+ + A E+ L E EP++ ++S
Sbjct: 476 DGNLVFRRTPNKDVVS-WNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIIS-A 533
Query: 546 CSESG 550
CS G
Sbjct: 534 CSHKG 538
Score = 205 bits (522), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 221/408 (54%), Gaps = 13/408 (3%)
Query: 10 TLHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSL 69
L L ++E Y TA+L S+ A + G Q+HC +K+G +SN+L
Sbjct: 208 NLFLREKEEGSDSDYVFTAVLSSLA-----ATIYVGLGRQIHCITIKNGLLGFVALSNAL 262
Query: 70 ISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKA 129
++MY+K A ++FD R++I+W++++ ++QNG + ++++F M+ G
Sbjct: 263 VTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSE 322
Query: 130 ELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFE 189
+ G+++ CS I LE G+Q+H+ ++ G FE +F +TAL+D+Y+K A + F+
Sbjct: 323 YTIVGVLNACSDICYLEEGKQLHSFLLKLG-FERHLFATTALVDMYAKAGCLADARKGFD 381
Query: 190 QMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRN 249
+ R+ WT++ISG + + + + + L+R M+ G+ P T+ VL AC+ L L
Sbjct: 382 CLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLEL 441
Query: 250 GKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYS 309
GK +HG+ GF + + +AL MY +C +L ++F RT KDVV W+++I G S
Sbjct: 442 GKQVHGHTIKHGFGLEVPIGSALSTMYSKCG-SLEDGNLVFRRTPNKDVVSWNAMISGLS 500
Query: 310 QSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVS 369
+G EA++LF M E +EP+ VT + I+S+C+ + F+ G + +M + D
Sbjct: 501 HNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGW-FYFNMMSDQIGLDPK 559
Query: 370 IGN--ALMNMYSKCGSITSSHQIFNEMAARD--FVSWTTLISGYGFHG 413
+ + ++++ S+ G + + + F E A D W L+S HG
Sbjct: 560 VDHYACMVDLLSRAGQLKEAKE-FIESANIDHGLCLWRILLSACKNHG 606
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 310 bits (794), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 185/570 (32%), Positives = 319/570 (55%), Gaps = 6/570 (1%)
Query: 9 QTLHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPV-ISN 67
+TL L++ E+H +G N+ + S + AC ++ G ++H + LKS + + + + N
Sbjct: 267 ETLELFR-EMHMTGPAPNSYTIVSALTACD-GFSYAKLGKEIHASVLKSSTHSSELYVCN 324
Query: 68 SLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVL 127
+LI+MY + K A ++ +M D ++WNS+I + QN Y +LE F +M G
Sbjct: 325 ALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS 384
Query: 128 KAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRV 187
+ II+ ++ L G ++HA VI G ++ ++ V L+D+YSKC+ R
Sbjct: 385 DEVSMTSIIAASGRLSNLLAGMELHAYVIKHG-WDSNLQVGNTLIDMYSKCNLTCYMGRA 443
Query: 188 FEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDL 247
F +M ++ +SWT +I+G + + ++LFR + ++ ++ + L +L A + L+ +
Sbjct: 444 FLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSM 503
Query: 248 RNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRG 307
K IH + G D + L+ +Y +C + R+ FE K KDVV W+S+I
Sbjct: 504 LIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRV-FESIKGKDVVSWTSMISS 561
Query: 308 YSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFD 367
+ +G+ SEA++LF RM + +SV LL ILS+ S L+ G +HCY+++ G +
Sbjct: 562 SALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLE 621
Query: 368 VSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQE 427
SI A+++MY+ CG + S+ +F+ + + + +T++I+ YG HG G+ A++LF +M+
Sbjct: 622 GSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRH 681
Query: 428 SGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIE 487
V PD I+ LA+L AC+HAGL+ E + E ++ EHY C VD+LG++ +
Sbjct: 682 ENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVV 741
Query: 488 DACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCS 547
+A + V M +P+ + +L++ACR H E+ E+ A +L+E EP+N N L+S V +
Sbjct: 742 EAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFA 801
Query: 548 ESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
E G W E+V M+A G+ K G S IE
Sbjct: 802 EQGRWNDVEKVRAKMKASGMEKHPGCSWIE 831
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 154/542 (28%), Positives = 282/542 (52%), Gaps = 29/542 (5%)
Query: 20 PSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKP 79
P GL S P+++KACA + + G +LH +K G + I N+L+SMYAK
Sbjct: 179 PLGLSS----FPALLKACAKLRDIRS-GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDL 233
Query: 80 ESAYQLFDEMPYR-DTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISL 138
+A +LFD + D + WNSI++ ++ +G + +LE+FREM++ G + + ++
Sbjct: 234 SAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTA 293
Query: 139 CSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVS 198
C +LG++IHA V+ + ++V AL+ +Y++C A R+ QM + V+
Sbjct: 294 CDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVT 353
Query: 199 WTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAY 258
W ++I G + + Y ++ F M G K V++T ++ A L +L G +H Y
Sbjct: 354 WNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVI 413
Query: 259 CCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAM 318
G+D + + L+ MY +C + R F R KD++ W+++I GY+Q+ EA+
Sbjct: 414 KHGWDSNLQVGNTLIDMYSKCNLTCYMGR-AFLRMHDKDLISWTTVIAGYAQNDCHVEAL 472
Query: 319 KLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMY 378
+LF + +R+E + + L +IL + + + +HC+I++ GL D I N L+++Y
Sbjct: 473 ELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVY 531
Query: 379 SKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVL 438
KC ++ + ++F + +D VSWT++IS +G EA++LF M E+G+ D++ +L
Sbjct: 532 GKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALL 591
Query: 439 AILSACNHAGLVKEAETLFNNVMK-----EKKIALA-IEHYACYVDLLGKSGKIEDACKV 492
ILSA + + + +++ E IA+A ++ YAC DL + K
Sbjct: 592 CILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDL--------QSAKA 643
Query: 493 VSTMPMKPSTRILSSLVSACRIHG----RLEVAEMLAHQLIEAEPENAANYTLLSMVCSE 548
V + +S+++A +HG +E+ + + H+ + P++ + LL CS
Sbjct: 644 VFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENV--SPDHISFLALL-YACSH 700
Query: 549 SG 550
+G
Sbjct: 701 AG 702
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 245/487 (50%), Gaps = 8/487 (1%)
Query: 47 GLQLHCTALKSGSDAD-PVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFT 105
G QLH K+ + ++ L+ MY K + A ++FDEMP R +WN++I +
Sbjct: 99 GRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYV 158
Query: 106 QNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSV 165
NG +L ++ M + G L ++ C+++ ++ G ++H+L++ G + +
Sbjct: 159 SNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLG-YHSTG 217
Query: 166 FVSTALLDLYSKCHHWLIALRVFEQMVIRNE-VSWTAMISGCIDSQNYDTGIDLFRAMQR 224
F+ AL+ +Y+K A R+F+ + + V W +++S S ++LFR M
Sbjct: 218 FIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHM 277
Query: 225 EGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAY-CCGFDFDHHLSAALMHMYCECTEAL 283
G P T+ L AC + GK IH + ++ AL+ MY C +
Sbjct: 278 TGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMP 337
Query: 284 HPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSC 343
RI+ + DVV W+S+I+GY Q+ EA++ FS M + + V++ +I+++
Sbjct: 338 QAERILRQMNNA-DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAAS 396
Query: 344 TRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWT 403
R S L G+ +H Y++K G + ++ +GN L++MYSKC + F M +D +SWT
Sbjct: 397 GRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWT 456
Query: 404 TLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKE 463
T+I+GY + EAL+LF ++ + +E D + + +IL A + + + + +++++
Sbjct: 457 TVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRK 516
Query: 464 KKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEM 523
+ I++ VD+ GK + A +V ++ K +S++S+ ++G A
Sbjct: 517 GLLDTVIQNE--LVDVYGKCRNMGYATRVFESIKGKDVVS-WTSMISSSALNGNESEAVE 573
Query: 524 LAHQLIE 530
L +++E
Sbjct: 574 LFRRMVE 580
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 174/317 (54%), Gaps = 5/317 (1%)
Query: 130 ELLAGIISLCSQIGELELGRQIHALVIVD-GSFELSVFVSTALLDLYSKCHHWLIALRVF 188
E A ++ LC + + GRQ+H+ + SFEL F++ L+ +Y KC A +VF
Sbjct: 81 EAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVF 139
Query: 189 EQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLR 248
++M R +W MI + + + + L+ M+ EGV + +L ACA+LRD+R
Sbjct: 140 DEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIR 199
Query: 249 NGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVK-DVVIWSSIIRG 307
+G +H G+ + AL+ MY + + L AR +F+ + K D V+W+SI+
Sbjct: 200 SGSELHSLLVKLGYHSTGFIVNALVSMYAK-NDDLSAARRLFDGFQEKGDAVLWNSILSS 258
Query: 308 YSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGL-NF 366
YS SG E ++LF M + PNS T+++ L++C S+ G +H ++K+ +
Sbjct: 259 YSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSS 318
Query: 367 DVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQ 426
++ + NAL+ MY++CG + + +I +M D V+W +LI GY + +EAL+ F +M
Sbjct: 319 ELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMI 378
Query: 427 ESGVEPDAITVLAILSA 443
+G + D +++ +I++A
Sbjct: 379 AAGHKSDEVSMTSIIAA 395
>sp|O80647|PP195_ARATH Pentatricopeptide repeat-containing protein At2g39620
OS=Arabidopsis thaliana GN=PCMP-E33 PE=3 SV=1
Length = 836
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 164/495 (33%), Positives = 288/495 (58%), Gaps = 3/495 (0%)
Query: 47 GLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQ 106
G+ +H A++ G D ++ SL+SMY+K + E A QLF + RD +SW+++I + Q
Sbjct: 319 GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQ 378
Query: 107 NGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVF 166
G + ++ +FR+M A L ++ C+ + LG+ IH I E +
Sbjct: 379 AGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAI-KADIESELE 437
Query: 167 VSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREG 226
+TA++ +Y+KC + AL+ FE++ I++ V++ A+ G + + D+++ M+ G
Sbjct: 438 TATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHG 497
Query: 227 VKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPA 286
V P T+ +L CA D G ++G GFD + H++ AL++M+ +C +AL A
Sbjct: 498 VCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKC-DALAAA 556
Query: 287 RIIFERTKV-KDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTR 345
++F++ K V W+ ++ GY G EA+ F +M++E+ +PN+VT + I+ +
Sbjct: 557 IVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAE 616
Query: 346 QSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTL 405
S L G+ VH +++ G +GN+L++MY+KCG I SS + F E++ + VSW T+
Sbjct: 617 LSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTM 676
Query: 406 ISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKK 465
+S Y HG A+ LFL MQE+ ++PD+++ L++LSAC HAGLV+E + +F + + K
Sbjct: 677 LSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHK 736
Query: 466 IALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLA 525
I +EHYAC VDLLGK+G +A +++ M +K S + +L+++ R+H L ++
Sbjct: 737 IEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAAL 796
Query: 526 HQLIEAEPENAANYT 540
QL++ EP N ++Y+
Sbjct: 797 CQLVKLEPLNPSHYS 811
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 147/513 (28%), Positives = 254/513 (49%), Gaps = 17/513 (3%)
Query: 34 IKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRD 93
+KACA + + GL++H + G ++D I +L+ MY K SA Q+FD+M +D
Sbjct: 107 LKACAGSMDFKK-GLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKD 165
Query: 94 TISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHA 153
++WN++++ QNG +L +F +M C + L +I S++ + ++ R +H
Sbjct: 166 VVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHG 225
Query: 154 LVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYD 213
LVI G S+ L+D+Y C A VFE++ ++E SW M++ + ++
Sbjct: 226 LVIKKG---FIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFE 282
Query: 214 TGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALM 273
++LF M+ V+ +V L A A + DL G AIH YA G D ++ +LM
Sbjct: 283 EVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLM 342
Query: 274 HMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNS 333
MY +C E L A +F + +DVV WS++I Y Q+G EA+ LF M I+PN+
Sbjct: 343 SMYSKCGE-LEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNA 401
Query: 334 VTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNE 393
VTL ++L C + G +HCY +KA + ++ A+++MY+KCG + + + F
Sbjct: 402 VTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFER 461
Query: 394 MAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEA 453
+ +D V++ L GY G +A ++ M+ GV PD+ T++ +L C
Sbjct: 462 LPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARG 521
Query: 454 ETLFNNVMK-----EKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSL 508
++ ++K E +A A+ + D L + + D C + ST + +
Sbjct: 522 SCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKC------GFEKSTVSWNIM 575
Query: 509 VSACRIHGRLEVAEMLAHQL-IEAEPENAANYT 540
++ +HG+ E A Q+ +E NA +
Sbjct: 576 MNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFV 608
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 226/465 (48%), Gaps = 28/465 (6%)
Query: 48 LQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQN 107
LQ+H + + SG N LI+ Y+ F + + + +FD + + WNS+I +T+
Sbjct: 22 LQVHGSLIVSGLKP----HNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRA 77
Query: 108 GFYVRSLEMFREM----------YLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIV 157
G + +L F M Y F LKA C+ + + G +IH L I
Sbjct: 78 GLHREALGFFGYMSEEKGIDPDKYSFTFALKA---------CAGSMDFKKGLRIHDL-IA 127
Query: 158 DGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGID 217
+ E V++ TAL+++Y K + A +VF++M +++ V+W M+SG + +
Sbjct: 128 EMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALL 187
Query: 218 LFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYC 277
LF M+ V V+L ++ A ++L + +HG GF F S+ L+ MYC
Sbjct: 188 LFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF--AFSSGLIDMYC 245
Query: 278 ECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLL 337
C + L+ A +FE KD W +++ Y+ +G E ++LF MR + N V
Sbjct: 246 NCAD-LYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAA 304
Query: 338 AILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAAR 397
+ L + L G+ +H Y ++ GL DVS+ +LM+MYSKCG + + Q+F + R
Sbjct: 305 SALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDR 364
Query: 398 DFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLF 457
D VSW+ +I+ Y G +EA+ LF +M ++P+A+T+ ++L C + +++
Sbjct: 365 DVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIH 424
Query: 458 NNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPST 502
+K I +E + + K G+ A K +P+K +
Sbjct: 425 CYAIK-ADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAV 468
>sp|Q9C9I6|PP116_ARATH Pentatricopeptide repeat-containing protein At1g71490
OS=Arabidopsis thaliana GN=PCMP-E67 PE=2 SV=1
Length = 681
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 177/569 (31%), Positives = 297/569 (52%), Gaps = 38/569 (6%)
Query: 47 GLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQ 106
G+Q+H + SG + V+ L++ Y+ F+ A + + + WN +I + +
Sbjct: 62 GVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAK 121
Query: 107 NGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVF 166
N + + ++ M G A ++ C + ++ GR +H + V S++ S++
Sbjct: 122 NELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVS-SYKSSLY 180
Query: 167 VSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMIS---------------------- 204
V AL+ +Y + + IA R+F++M R+ VSW A+I+
Sbjct: 181 VCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSG 240
Query: 205 -------------GCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGK 251
GC+ + NY + L M+ V + I L AC+ + +R GK
Sbjct: 241 VEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGK 300
Query: 252 AIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQS 311
IHG A +D ++ L+ MY +C + H A I+F +T+ + W+SII GY+Q
Sbjct: 301 EIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRH-ALIVFRQTEENSLCTWNSIISGYAQL 359
Query: 312 GDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVS-I 370
EA L M + +PNS+TL +IL C R + L HG HCYI++ D + +
Sbjct: 360 NKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTML 419
Query: 371 GNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGV 430
N+L+++Y+K G I ++ Q+ + M+ RD V++T+LI GYG G G AL LF EM SG+
Sbjct: 420 WNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGI 479
Query: 431 EPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDAC 490
+PD +TV+A+LSAC+H+ LV E E LF + E I ++H++C VDL G++G + A
Sbjct: 480 KPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAK 539
Query: 491 KVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCSESG 550
++ MP KPS ++L++AC IHG ++ + A +L+E +PEN Y L++ + + +G
Sbjct: 540 DIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAG 599
Query: 551 NWLGAEEVWRVMRAKGLSKSYGFSRIENE 579
+W EV +MR G+ K G + I+ +
Sbjct: 600 SWSKLAEVRTIMRDLGVKKDPGCAWIDTD 628
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 7/244 (2%)
Query: 237 VLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALH-PARIIFERTKV 295
+L AC ++R G +H + G ++ L L+ Y LH A+ I E + +
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFN--LHNEAQSIIENSDI 106
Query: 296 KDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGV 355
+ W+ +I Y+++ E + + RM + I P++ T ++L +C ++ G V
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVV 166
Query: 356 HCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYG 415
H I + + + NAL++MY + ++ + ++F+ M RD VSW +I+ Y G
Sbjct: 167 HGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMW 226
Query: 416 EEALQLFLEMQESGVEPDAITVLAILSAC----NHAGLVKEAETLFNNVMKEKKIALAIE 471
EA +LF +M SGVE IT I C N+ G + + N +A+ I
Sbjct: 227 SEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIG 286
Query: 472 HYAC 475
AC
Sbjct: 287 LKAC 290
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 5/138 (3%)
Query: 312 GDLSEAMKLFSRMRLERIEPNSVTLL-----AILSSCTRQSFLSHGLGVHCYIMKAGLNF 366
G L +A K FS +RL+ S L+ ++LS+C G+ VH + + +G+ +
Sbjct: 17 GHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEY 76
Query: 367 DVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQ 426
+ L+ YS + I + W LI+ Y + EE + + M
Sbjct: 77 HSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMV 136
Query: 427 ESGVEPDAITVLAILSAC 444
G+ PDA T ++L AC
Sbjct: 137 SKGIRPDAFTYPSVLKAC 154
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 307 bits (787), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 190/590 (32%), Positives = 306/590 (51%), Gaps = 49/590 (8%)
Query: 32 SVIKACAYAQTHQHFGLQLHCTAL-KSGSDADPVIS----------NSLISMYAKFSKPE 80
++I+A Y +T + + +H AL KS + A V N+L+ Y+K
Sbjct: 31 NIIRALPYPETFLYNNI-VHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLIS 89
Query: 81 SAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMY--LCGFVLKAELLAGIISL 138
F+++P RD ++WN +I ++ +G +++ + M + + L+ ++ L
Sbjct: 90 EMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMT-MLKL 148
Query: 139 CSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSK--------------------- 177
S G + LG+QIH VI G FE + V + LL +Y+
Sbjct: 149 SSSNGHVSLGKQIHGQVIKLG-FESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVM 207
Query: 178 ----------CHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGV 227
C AL++F M ++ VSW AMI G + I+ FR M+ +G+
Sbjct: 208 YNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGL 266
Query: 228 KPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPAR 287
K + VL AC L + GK IH F ++ +AL+ MYC+C + LH A+
Sbjct: 267 KMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC-KCLHYAK 325
Query: 288 IIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQS 347
+F+R K K+VV W++++ GY Q+G EA+K+F M+ I+P+ TL +S+C S
Sbjct: 326 TVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVS 385
Query: 348 FLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLIS 407
L G H + +GL V++ N+L+ +Y KCG I S ++FNEM RD VSWT ++S
Sbjct: 386 SLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVS 445
Query: 408 GYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIA 467
Y G E +QLF +M + G++PD +T+ ++SAC+ AGLV++ + F + E I
Sbjct: 446 AYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIV 505
Query: 468 LAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQ 527
+I HY+C +DL +SG++E+A + ++ MP P ++L+SACR G LE+ + A
Sbjct: 506 PSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAES 565
Query: 528 LIEAEPENAANYTLLSMVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
LIE +P + A YTLLS + + G W ++ R MR K + K G S I+
Sbjct: 566 LIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIK 615
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 145/337 (43%), Gaps = 36/337 (10%)
Query: 16 QELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAK 75
+E+ GL + SV+ AC G Q+H +++ + ++LI MY K
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINE-GKQIHACIIRTNFQDHIYVGSALIDMYCK 317
Query: 76 FSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGI 135
A +FD M ++ +SW +++ + Q G ++++F +M G L
Sbjct: 318 CKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQA 377
Query: 136 ISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRN 195
IS C+ + LE G Q H I G V VS +L+ LY KC + R+F +M +R+
Sbjct: 378 ISACANVSSLEEGSQFHGKAITSGLIHY-VTVSNSLVTLYGKCGDIDDSTRLFNEMNVRD 436
Query: 196 EVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHG 255
VSWTAM+S I LF M + G+KP VTLT V+ AC+ R G G
Sbjct: 437 AVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS-----RAGLVEKG 491
Query: 256 YAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLS 315
Y ++ + ++ H C +I +S+SG L
Sbjct: 492 QRYFKLMTSEYGIVPSIGHYSC--------------------------MIDLFSRSGRLE 525
Query: 316 EAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHG 352
EAM+ + M P+++ +LS+C + L G
Sbjct: 526 EAMRFINGMPF---PPDAIGWTTLLSACRNKGNLEIG 559
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 306 bits (785), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/595 (29%), Positives = 308/595 (51%), Gaps = 48/595 (8%)
Query: 23 LYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESA 82
+ S+ A++ ++IK ++ QLH +++ S + S +IS+Y A
Sbjct: 1 MSSSKALIKTLIKNPTRIKSKSQ-AKQLHAQFIRTQSLSHTSAS-IVISIYTNLKLLHEA 58
Query: 83 YQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQI 142
LF + ++W S+I CFT + ++L F EM G + ++ C+ +
Sbjct: 59 LLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMM 118
Query: 143 GELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIAL----------------- 185
+L G +H ++ G + ++ AL+++Y+K L+ +
Sbjct: 119 MDLRFGESVHGFIVRLG-MDCDLYTGNALMNMYAK----LLGMGSKISVGNVFDEMPQRT 173
Query: 186 -----------------------RVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAM 222
RVFE M ++ VS+ +I+G S Y+ + + R M
Sbjct: 174 SNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM 233
Query: 223 QREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEA 282
+KP TL+ VL +E D+ GK IHGY G D D ++ ++L+ MY +
Sbjct: 234 GTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARI 293
Query: 283 LHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSS 342
R+ F R +D + W+S++ GY Q+G +EA++LF +M +++P +V +++ +
Sbjct: 294 EDSERV-FSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPA 352
Query: 343 CTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSW 402
C + L G +H Y+++ G ++ I +AL++MYSKCG+I ++ +IF+ M D VSW
Sbjct: 353 CAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSW 412
Query: 403 TTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMK 462
T +I G+ HG+G EA+ LF EM+ GV+P+ + +A+L+AC+H GLV EA FN++ K
Sbjct: 413 TAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK 472
Query: 463 EKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAE 522
+ +EHYA DLLG++GK+E+A +S M ++P+ + S+L+S+C +H LE+AE
Sbjct: 473 VYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAE 532
Query: 523 MLAHQLIEAEPENAANYTLLSMVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
+A ++ + EN Y L+ + + +G W ++ MR KGL K S IE
Sbjct: 533 KVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIE 587
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/467 (28%), Positives = 229/467 (49%), Gaps = 45/467 (9%)
Query: 17 ELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKF 76
E+ SG + + PSV+K+C + FG +H ++ G D D N+L++MYAK
Sbjct: 95 EMRASGRCPDHNVFPSVLKSCTMMMDLR-FGESVHGFIVRLGMDCDLYTGNALMNMYAKL 153
Query: 77 ---SKPESAYQLFDEMPYR---------------------------------DTISWNSI 100
S +FDEMP R D +S+N+I
Sbjct: 154 LGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTI 213
Query: 101 INCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGS 160
I + Q+G Y +L M REM + L+ ++ + S+ ++ G++IH VI G
Sbjct: 214 IAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKG- 272
Query: 161 FELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFR 220
+ V++ ++L+D+Y+K + RVF ++ R+ +SW ++++G + + Y+ + LFR
Sbjct: 273 IDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFR 332
Query: 221 AMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECT 280
M VKP V + V+ ACA L L GK +HGY GF + +++AL+ MY +C
Sbjct: 333 QMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCG 392
Query: 281 EALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAIL 340
+ AR IF+R V D V W++II G++ G EA+ LF M+ + ++PN V +A+L
Sbjct: 393 N-IKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVL 451
Query: 341 SSCTRQSFLSHGLGVHCYIMKA-GLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDF 399
++C+ + G + K GLN ++ A+ ++ + G + ++ ++M
Sbjct: 452 TACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPT 511
Query: 400 VS-WTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACN 445
S W+TL+S H + L+L ++ E D+ + A + CN
Sbjct: 512 GSVWSTLLSSCSVH----KNLELAEKVAEKIFTVDSENMGAYVLMCN 554
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 168/339 (49%), Gaps = 39/339 (11%)
Query: 7 YEQTLHLYKQELHPSGLYSNTAILPSVIKACA-YAQTHQHFGLQLHCTALKSGSDADPVI 65
YE L + + E+ + L ++ L SV+ + Y + G ++H ++ G D+D I
Sbjct: 223 YEDALRMVR-EMGTTDLKPDSFTLSSVLPIFSEYVDVIK--GKEIHGYVIRKGIDSDVYI 279
Query: 66 SNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGF 125
+SL+ MYAK ++ E + ++F + RD ISWNS++ + QNG Y +L +FR+M
Sbjct: 280 GSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV 339
Query: 126 VLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIAL 185
A + +I C+ + L LG+Q+H V+ G F ++F+++AL+D+YSKC + A
Sbjct: 340 KPGAVAFSSVIPACAHLATLHLGKQLHGYVL-RGGFGSNIFIASALVDMYSKCGNIKAAR 398
Query: 186 RVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELR 245
++F++M + +EVSWTA+I G + + LF M+R+GVKP +V VL AC+ +
Sbjct: 399 KIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV- 457
Query: 246 DLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSII 305
G + Y + L+ L H ++++
Sbjct: 458 ----GLVDEAWGYFNSMTKVYGLNQELEH--------------------------YAAVA 487
Query: 306 RGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCT 344
++G L EA S+M +EP +LSSC+
Sbjct: 488 DLLGRAGKLEEAYNFISKM---CVEPTGSVWSTLLSSCS 523
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 7/210 (3%)
Query: 7 YEQTLHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVIS 66
Y + L L++Q + + + SVI ACA+ T H G QLH L+ G ++ I+
Sbjct: 324 YNEALRLFRQ-MVTAKVKPGAVAFSSVIPACAHLAT-LHLGKQLHGYVLRGGFGSNIFIA 381
Query: 67 NSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFV 126
++L+ MY+K ++A ++FD M D +SW +II +G ++ +F EM G
Sbjct: 382 SALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 441
Query: 127 LKAELLAGIISLCSQIGEL-ELGRQIHALVIVDG-SFELSVFVSTALLDLYSKCHHWLIA 184
+++ CS +G + E +++ V G + EL + + A DL + A
Sbjct: 442 PNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA--DLLGRAGKLEEA 499
Query: 185 LRVFEQMVIRNEVS-WTAMISGCIDSQNYD 213
+M + S W+ ++S C +N +
Sbjct: 500 YNFISKMCVEPTGSVWSTLLSSCSVHKNLE 529
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 305 bits (781), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 175/575 (30%), Positives = 302/575 (52%), Gaps = 7/575 (1%)
Query: 7 YEQTLHLYKQELHPSG-LYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADP-- 63
+++ L++Q S + +++ C A G Q+H A+K G D +P
Sbjct: 126 FDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVG-QVHAFAVKLGFDTNPFL 184
Query: 64 VISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLC 123
+SN L+ Y + + + A LF+E+P +D++++N++I + ++G Y S+ +F +M
Sbjct: 185 TVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQS 244
Query: 124 GFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLI 183
G +G++ + + LG+Q+HAL + G F V +LD YSK L
Sbjct: 245 GHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTG-FSRDASVGNQILDFYSKHDRVLE 303
Query: 184 ALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAE 243
+F++M + VS+ +IS + Y+ + FR MQ G +L A
Sbjct: 304 TRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAAN 363
Query: 244 LRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSS 303
L L+ G+ +H A D H+ +L+ MY +C E A +IF+ + V W++
Sbjct: 364 LSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKC-EMFEEAELIFKSLPQRTTVSWTA 422
Query: 304 IIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAG 363
+I GY Q G +KLF++MR + + T +L + + L G +H +I+++G
Sbjct: 423 LISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSG 482
Query: 364 LNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFL 423
+V G+ L++MY+KCGSI + Q+F EM R+ VSW LIS + +G GE A+ F
Sbjct: 483 NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFA 542
Query: 424 EMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKS 483
+M ESG++PD++++L +L+AC+H G V++ F + I +HYAC +DLLG++
Sbjct: 543 KMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRN 602
Query: 484 GKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEP-ENAANYTLL 542
G+ +A K++ MP +P + SS+++ACRIH +AE A +L E +AA Y +
Sbjct: 603 GRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSM 662
Query: 543 SMVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
S + + +G W +V + MR +G+ K +S +E
Sbjct: 663 SNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVE 697
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 141/532 (26%), Positives = 243/532 (45%), Gaps = 30/532 (5%)
Query: 62 DPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREM- 120
+ V +N++IS + K SA LFD MP R ++W ++ + +N + + ++FR+M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 121 -----YLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVF--VSTALLD 173
L V LL G C+ Q+HA + G F+ + F VS LL
Sbjct: 138 RSSSCTLPDHVTFTTLLPG----CNDAVPQNAVGQVHAFAVKLG-FDTNPFLTVSNVLLK 192
Query: 174 LYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVT 233
Y + +A +FE++ ++ V++ +I+G Y I LF M++ G +P+ T
Sbjct: 193 SYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFT 252
Query: 234 LTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERT 293
+ VL A L D G+ +H + GF D + ++ Y + L R++F+
Sbjct: 253 FSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLE-TRMLFDEM 311
Query: 294 KVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGL 353
D V ++ +I YSQ+ ++ F M+ + + +LS S L G
Sbjct: 312 PELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGR 371
Query: 354 GVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGY---G 410
+HC + A + + +GN+L++MY+KC + IF + R VSWT LISGY G
Sbjct: 372 QLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKG 431
Query: 411 FHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAI 470
HG G L+LF +M+ S + D T +L A + + L +++ +
Sbjct: 432 LHGAG---LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVF 488
Query: 471 EHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIE 530
+ VD+ K G I+DA +V MP + + ++L+SA +G E A ++IE
Sbjct: 489 SG-SGLVDMYAKCGSIKDAVQVFEEMPDRNAVS-WNALISAHADNGDGEAAIGAFAKMIE 546
Query: 531 A--EPENAANYTLLSMVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIENEY 580
+ +P++ + +L+ CS G E ++ M S YG + + Y
Sbjct: 547 SGLQPDSVSILGVLT-ACSHCGFVEQGTEYFQAM-----SPIYGITPKKKHY 592
Score = 41.2 bits (95), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 33/126 (26%)
Query: 355 VHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISG------ 408
V I+K G + D N ++ + G ++++ ++++EM ++ VS T+ISG
Sbjct: 35 VDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGD 94
Query: 409 -------------------------YGFHGYGEEALQLFLEM--QESGVEPDAITVLAIL 441
Y + + +EA +LF +M S PD +T +L
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 442 SACNHA 447
CN A
Sbjct: 155 PGCNDA 160
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 305 bits (781), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 189/576 (32%), Positives = 300/576 (52%), Gaps = 66/576 (11%)
Query: 67 NSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFV 126
N+++S Y+K +S + FD++P RD++SW ++I + G Y +++ + +M G
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 127 LKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALR 186
L +++ + +E G+++H+ ++ G +V VS +LL++Y+KC ++A
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLG-LRGNVSVSNSLLNMYAKCGDPMMAKF 202
Query: 187 VFEQMVIRNEVSWTAMIS-----GCID-------------------------SQNYD-TG 215
VF++MV+R+ SW AMI+ G +D + YD
Sbjct: 203 VFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRA 262
Query: 216 IDLFRAMQREGV-KPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMH 274
+D+F M R+ + P R TL VL ACA L L GK IH + GFD + AL+
Sbjct: 263 LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALIS 322
Query: 275 MYCECTEA--------------------------------LHPARIIFERTKVKDVVIWS 302
MY C ++ A+ IF K +DVV W+
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWT 382
Query: 303 SIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKA 362
++I GY Q G EA+ LF M PNS TL A+LS + + LSHG +H +K+
Sbjct: 383 AMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS 442
Query: 363 GLNFDVSIGNALMNMYSKCGSITSSHQIFNEM-AARDFVSWTTLISGYGFHGYGEEALQL 421
G + VS+ NAL+ MY+K G+ITS+ + F+ + RD VSWT++I HG+ EEAL+L
Sbjct: 443 GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 422 FLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLG 481
F M G+ PD IT + + SAC HAGLV + F+ + KI + HYAC VDL G
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 482 KSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTL 541
++G +++A + + MP++P SL+SACR+H +++ ++ A +L+ EPEN+ Y+
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSA 622
Query: 542 LSMVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
L+ + S G W A ++ + M+ + K GFS IE
Sbjct: 623 LANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIE 658
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 206/469 (43%), Gaps = 68/469 (14%)
Query: 148 GRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCI 207
G +HA + D + F +L YSK F+Q+ R+ VSWT MI G
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 208 DSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHH 267
+ Y I + M +EG++PT+ TLT VL + A R + GK +H + G +
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182
Query: 268 LSAALMHMYCECTEALHPARIIFERTKV-------------------------------K 296
+S +L++MY +C + + A+ +F+R V +
Sbjct: 183 VSNSLLNMYAKCGDPMM-AKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER 241
Query: 297 DVVIWSSIIRGYSQSGDLSEAMKLFSRM-RLERIEPNSVTLLAILSSCTRQSFLSHGLGV 355
D+V W+S+I G++Q G A+ +FS+M R + P+ TL ++LS+C L G +
Sbjct: 242 DIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQI 301
Query: 356 HCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQ-------------------------- 389
H +I+ G + + NAL++MYS+CG + ++ +
Sbjct: 302 HSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLG 361
Query: 390 -------IFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILS 442
IF + RD V+WT +I GY HG EA+ LF M G P++ T+ A+LS
Sbjct: 362 DMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLS 421
Query: 443 ACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPST 502
+ + + + + +K +I ++ + + K+G I A + + + T
Sbjct: 422 VASSLASLSHGKQIHGSAVKSGEI-YSVSVSNALITMYAKAGNITSASRAFDLIRCERDT 480
Query: 503 RILSSLVSACRIHGRLEVA-EMLAHQLIEAEPENAANYTLLSMVCSESG 550
+S++ A HG E A E+ L+E + Y + C+ +G
Sbjct: 481 VSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAG 529
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 147/555 (26%), Positives = 240/555 (43%), Gaps = 119/555 (21%)
Query: 13 LYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISM 72
+ K+ + P+ ++ T +L SV A G ++H +K G + +SNSL++M
Sbjct: 137 MVKEGIEPTQ-FTLTNVLASVA-----ATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNM 190
Query: 73 YAKFSKPESAYQLFD-------------------------------EMPYRDTISWNSII 101
YAK P A +FD +M RD ++WNS+I
Sbjct: 191 YAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMI 250
Query: 102 NCFTQNGFYVRSLEMFREMYLCGFVLKAEL-LAGIISLCSQIGELELGRQIHALVIVDGS 160
+ F Q G+ +R+L++F +M + LA ++S C+ + +L +G+QIH+ ++ G
Sbjct: 251 SGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTG- 309
Query: 161 FELSVFVSTALLDLYSKCHHWLIALRVFEQ------------------------------ 190
F++S V AL+ +YS+C A R+ EQ
Sbjct: 310 FDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNI 369
Query: 191 ---MVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDL 247
+ R+ V+WTAMI G +Y I+LFR+M G +P TL +L + L L
Sbjct: 370 FVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASL 429
Query: 248 RNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRG 307
+GK IHG A G + +S AL+ MY + +R +D V W+S+I
Sbjct: 430 SHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIA 489
Query: 308 YSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFD 367
+Q G EA++LF M +E + P+ +T + + S+CT AGL
Sbjct: 490 LAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTH----------------AGL--- 530
Query: 368 VSIGNALMNMYSKCGSI--TSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEM 425
V+ G +M I T SH + ++ +G G +EA + +M
Sbjct: 531 VNQGRQYFDMMKDVDKIIPTLSH-------------YACMVDLFGRAGLLQEAQEFIEKM 577
Query: 426 QESGVEPDAITVLAILSACN-HAGLVKEAETLFNNVMKEKKIALAIEH---YACYVDLLG 481
+EPD +T ++LSAC H + V E+ + L E+ Y+ +L
Sbjct: 578 P---IEPDVVTWGSLLSACRVHKNID------LGKVAAERLLLLEPENSGAYSALANLYS 628
Query: 482 KSGKIEDACKVVSTM 496
GK E+A K+ +M
Sbjct: 629 ACGKWEEAAKIRKSM 643
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 39/152 (25%)
Query: 331 PNSVTLLAILSSCTR--QSFLSHGLG------VHCYIMKAGLNFDVSIGNALMNMYSKCG 382
P ++L +L CT Q ++ G VHC ++K+GL F V + N LMN+YSK G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 383 SITSSHQIFNEM-------------------------------AARDFVSWTTLISGYGF 411
+ ++F+EM RD VSWTT+I GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 412 HGYGEEALQLFLEMQESGVEPDAITVLAILSA 443
G +A+++ +M + G+EP T+ +L++
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
>sp|Q9MA85|PP215_ARATH Pentatricopeptide repeat-containing protein At3g05340
OS=Arabidopsis thaliana GN=PCMP-E83 PE=2 SV=2
Length = 658
Score = 305 bits (780), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 180/558 (32%), Positives = 296/558 (53%), Gaps = 13/558 (2%)
Query: 33 VIKACAYAQTHQHFGLQLHCTALKSGSDADPV----------ISNSLISMYAKFSKPESA 82
++ C H G LH + +K+ +PV + NSL+S+YAK K A
Sbjct: 50 LLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDA 109
Query: 83 YQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQI 142
+LFDEMP RD IS N + F +N + + M G A L ++S+C
Sbjct: 110 IKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDHATLTI-VLSVCDTP 168
Query: 143 GELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAM 202
+ + IHAL I+ G ++ + V L+ Y KC + VF+ M RN ++ TA+
Sbjct: 169 EFCLVTKMIHALAILSG-YDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAV 227
Query: 203 ISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGF 262
ISG I+++ ++ G+ LF M+R V P VT L AC+ + + G+ IH + G
Sbjct: 228 ISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGI 287
Query: 263 DFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFS 322
+ + + +ALM MY +C ++ A IFE T D V + I+ G +Q+G EA++ F
Sbjct: 288 ESELCIESALMDMYSKCG-SIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFI 346
Query: 323 RMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCG 382
RM +E ++ + A+L + L G +H ++K + + + N L+NMYSKCG
Sbjct: 347 RMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCG 406
Query: 383 SITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILS 442
+T S +F M R++VSW ++I+ + HG+G AL+L+ EM V+P +T L++L
Sbjct: 407 DLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLH 466
Query: 443 ACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPST 502
AC+H GL+ + L N + + I EHY C +D+LG++G +++A + ++P+KP
Sbjct: 467 ACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDC 526
Query: 503 RILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNWLGAEEVWRVM 562
+I +L+ AC HG EV E A QL + P++++ + L++ + S G W + + M
Sbjct: 527 KIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRM 586
Query: 563 RAKGLSKSYGFSRIENEY 580
+A G++K G S IE E+
Sbjct: 587 KAMGVTKETGISSIEIEH 604
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%)
Query: 32 SVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPY 91
S + ++ G QLH +K + ++N LI+MY+K + +F MP
Sbjct: 361 SAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPK 420
Query: 92 RDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQI 151
R+ +SWNS+I F ++G + +L+++ EM ++ CS +G ++ GR++
Sbjct: 421 RNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGREL 480
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 304 bits (779), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 191/575 (33%), Positives = 326/575 (56%), Gaps = 21/575 (3%)
Query: 13 LYKQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSD--ADPVISNSLI 70
+ + E+ PS + S + P+V + + + + +GL L K G + D + +S I
Sbjct: 205 MMRMEVKPSPV-SFVNVFPAVSISRSIKKANVFYGLML-----KLGDEYVKDLFVVSSAI 258
Query: 71 SMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAE 130
SMYA+ ES+ ++FD R+ WN++I + QN V S+E+F E ++ E
Sbjct: 259 SMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDE 318
Query: 131 ---LLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRV 187
LLA S S + ++ELGRQ H V + EL + + +L+ +YS+C + V
Sbjct: 319 VTYLLAA--SAVSALQQVELGRQFHGFVSKNFR-ELPIVIVNSLMVMYSRCGSVHKSFGV 375
Query: 188 FEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDL 247
F M R+ VSW MIS + + D G+ L MQ++G K +T+T +L A + LR+
Sbjct: 376 FLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNK 435
Query: 248 RNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKV--KDVVIWSSII 305
GK H + G F+ +++ L+ MY + + + ++ +FE + +D W+S+I
Sbjct: 436 EIGKQTHAFLIRQGIQFEG-MNSYLIDMYSK-SGLIRISQKLFEGSGYAERDQATWNSMI 493
Query: 306 RGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLN 365
GY+Q+G + +F +M + I PN+VT+ +IL +C++ + G +H + ++ L+
Sbjct: 494 SGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLD 553
Query: 366 FDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEM 425
+V + +AL++MYSK G+I + +F++ R+ V++TT+I GYG HG GE A+ LFL M
Sbjct: 554 QNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSM 613
Query: 426 QESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGK 485
QESG++PDAIT +A+LSAC+++GL+ E +F + + I + EHY C D+LG+ G+
Sbjct: 614 QESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGR 673
Query: 486 IEDACKVVSTMPMKPS-TRILSSLVSACRIHGRLEVAEMLAHQLIEAEP-ENAANY-TLL 542
+ +A + V + + + + SL+ +C++HG LE+AE ++ +L + + +N + Y LL
Sbjct: 674 VNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLL 733
Query: 543 SMVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
S + +E W ++V R MR KGL K G S IE
Sbjct: 734 SNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIE 768
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 133/540 (24%), Positives = 263/540 (48%), Gaps = 36/540 (6%)
Query: 32 SVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAK-FSKP-----ESAYQL 85
S +KACA + + G +HC ++ ++ V+ NSL++MY + P + ++
Sbjct: 112 STLKACAETKNLKA-GKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKV 170
Query: 86 FDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGEL 145
FD M ++ ++WN++I+ + + G R+ E R+ G +++ E+ +S + +
Sbjct: 171 FDNMRRKNVVAWNTLISWYVKTG---RNAEACRQF---GIMMRMEVKPSPVSFVNVFPAV 224
Query: 146 ELGRQIHALVIVDG-------SFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVS 198
+ R I + G + +FV ++ + +Y++ + RVF+ V RN
Sbjct: 225 SISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEV 284
Query: 199 WTAMISGCIDSQNYDTGIDLF-RAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYA 257
W MI + + I+LF A+ + + VT + A + L+ + G+ HG+
Sbjct: 285 WNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV 344
Query: 258 YCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEA 317
+ + +LM MY C ++H + +F + +DVV W+++I + Q+G E
Sbjct: 345 SKNFRELPIVIVNSLMVMYSRCG-SVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEG 403
Query: 318 MKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNM 377
+ L M+ + + + +T+ A+LS+ + G H ++++ G+ F+ + + L++M
Sbjct: 404 LMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDM 462
Query: 378 YSKCGSITSSHQIF--NEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAI 435
YSK G I S ++F + A RD +W ++ISGY +G+ E+ +F +M E + P+A+
Sbjct: 463 YSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAV 522
Query: 436 TVLAILSACNHAGLVKEAETLFNNVMK---EKKIALAIEHYACYVDLLGKSGKIEDACKV 492
TV +IL AC+ G V + L ++ ++ + +A + VD+ K+G I+ A +
Sbjct: 523 TVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVA----SALVDMYSKAGAIKYAEDM 578
Query: 493 VSTMPMKPSTRILSSLVSACRIHGRLE--VAEMLAHQLIEAEPENAANYTLLSMVCSESG 550
S + S ++++ HG E ++ L+ Q +P+ +LS CS SG
Sbjct: 579 FSQTKERNSV-TYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLS-ACSYSG 636
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 197/409 (48%), Gaps = 23/409 (5%)
Query: 57 SGSDADPVISNSLISMYAKFSK------PESAYQLFDEMPYRDTISWNSIINCFTQNGFY 110
S + + P ++ S+ ++ SK P+ A QLFD +P T+ WN+II F N
Sbjct: 27 SSTFSPPTLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLP 86
Query: 111 VRSLEMFREMYLCGFVLK--AELLAGIISLCSQIGELELGRQIHALVI--VDGSFELSVF 166
+L + M A + + C++ L+ G+ +H +I + S S
Sbjct: 87 HEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNS---SRV 143
Query: 167 VSTALLDLY------SKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFR 220
V +L+++Y C + + +VF+ M +N V+W +IS + + F
Sbjct: 144 VHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFG 203
Query: 221 AMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDF--DHHLSAALMHMYCE 278
M R VKP+ V+ V A + R ++ +G G ++ D + ++ + MY E
Sbjct: 204 IMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAE 263
Query: 279 CTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLF-SRMRLERIEPNSVTLL 337
+ + +R +F+ +++ +W+++I Y Q+ L E+++LF + + I + VT L
Sbjct: 264 LGD-IESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYL 322
Query: 338 AILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAAR 397
S+ + + G H ++ K + I N+LM MYS+CGS+ S +F M R
Sbjct: 323 LAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRER 382
Query: 398 DFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNH 446
D VSW T+IS + +G +E L L EMQ+ G + D ITV A+LSA ++
Sbjct: 383 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASN 431
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 12/187 (6%)
Query: 286 ARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEP----NSVTLLAILS 341
AR +F+ V+W++II G+ + EA+ +SRM+ + P ++ T + L
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMK--KTAPFTNCDAYTYSSTLK 115
Query: 342 SCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSS------HQIFNEMA 395
+C L G VHC++++ N + N+LMNMY C + ++F+ M
Sbjct: 116 ACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMR 175
Query: 396 ARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAET 455
++ V+W TLIS Y G EA + F M V+P ++ + + A + + +K+A
Sbjct: 176 RKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANV 235
Query: 456 LFNNVMK 462
+ ++K
Sbjct: 236 FYGLMLK 242
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 303 bits (775), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 169/521 (32%), Positives = 288/521 (55%), Gaps = 8/521 (1%)
Query: 64 VISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLC 123
+++ +LI Y + E A LFDEMP RD ++W ++I + + + R+ E F EM
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 124 GFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWL- 182
G L+ ++ C + L G +H +V+ G E S++V A++++Y+ C +
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLG-MEGSLYVDNAMMNMYATCSVTME 164
Query: 183 IALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACA 242
A +F + ++N+V+WT +I+G + G+ +++ M E + T +TI + A A
Sbjct: 165 AACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASA 224
Query: 243 ELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWS 302
+ + GK IH GF + + +++ +YC C L A+ F + KD++ W+
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCG-YLSEAKHYFHEMEDKDLITWN 283
Query: 303 SIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKA 362
++I +S D SEA+ +F R + PN T +++++C + L+ G +H I +
Sbjct: 284 TLISELERS-DSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR 342
Query: 363 GLNFDVSIGNALMNMYSKCGSITSSHQIFNEMA-ARDFVSWTTLISGYGFHGYGEEALQL 421
G N +V + NAL++MY+KCG+I S ++F E+ R+ VSWT+++ GYG HGYG EA++L
Sbjct: 343 GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVEL 402
Query: 422 FLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLG 481
F +M SG+ PD I +A+LSAC HAGLV++ FN + E I + Y C VDLLG
Sbjct: 403 FDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLG 462
Query: 482 KSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLE-VAEMLAHQLIEAEPENAANYT 540
++GKI +A ++V MP KP +++ AC+ H ++ + A +++E +P+ Y
Sbjct: 463 RAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYV 522
Query: 541 LLSMVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRI--ENE 579
+LS + + G W+ V ++MR G K G S I EN+
Sbjct: 523 MLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQ 563
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 150/338 (44%), Gaps = 47/338 (13%)
Query: 11 LHLYKQELHPSGLYSNTAILPSVIKACAYAQTHQH---FGLQLHCTALKSGSDADPVISN 67
L +YKQ L N + P I A G Q+H + +K G ++ + N
Sbjct: 198 LKMYKQML-----LENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMN 252
Query: 68 SLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVL 127
S++ +Y + A F EM +D I+WN++I+ ++ +L MF+ GFV
Sbjct: 253 SILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD-SSEALLMFQRFESQGFVP 311
Query: 128 KAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRV 187
+++ C+ I L G+Q+H + G F +V ++ AL+D+Y+KC + + RV
Sbjct: 312 NCYTFTSLVAACANIAALNCGQQLHGRIFRRG-FNKNVELANALIDMYAKCGNIPDSQRV 370
Query: 188 FEQMVI-RNEVSWTAMISGCIDSQNYDT-GIDLFRAMQREGVKPTRVTLTIVLLACAELR 245
F ++V RN VSWT+M+ G S Y ++LF M G++P R+ VL AC
Sbjct: 371 FGEIVDRRNLVSWTSMMIG-YGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHA- 428
Query: 246 DLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSII 305
G G Y F+ E ++P R I+ + ++
Sbjct: 429 ----GLVEKGLKY---FNV------------MESEYGINPDRDIY-----------NCVV 458
Query: 306 RGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSC 343
++G + EA +L RM +P+ T AIL +C
Sbjct: 459 DLLGRAGKIGEAYELVERMPF---KPDESTWGAILGAC 493
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 302 bits (774), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 180/563 (31%), Positives = 313/563 (55%), Gaps = 12/563 (2%)
Query: 22 GLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGS-DADPVISNSLISMYAKFSKP- 79
GL N +VI+AC+ + G +K+G ++D + SLI M+ K
Sbjct: 161 GLVPNDYCYTAVIRACSNSD-FVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF 219
Query: 80 ESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLC 139
E+AY++FD+M + ++W +I Q GF ++ F +M L GF L+ + S C
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 140 SQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCH---HWLIALRVFEQMVIRNE 196
+++ L LG+Q+H+ I G L V +L+D+Y+KC +VF++M +
Sbjct: 280 AELENLSLGKQLHSWAIRSG---LVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSV 336
Query: 197 VSWTAMISGCIDSQNYDT-GIDLFRAMQREG-VKPTRVTLTIVLLACAELRDLRNGKAIH 254
+SWTA+I+G + + N T I+LF M +G V+P T + AC L D R GK +
Sbjct: 337 MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVL 396
Query: 255 GYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDL 314
G A+ G + ++ +++ M+ + ++ + A+ FE K++V +++ + G ++ +
Sbjct: 397 GQAFKRGLASNSSVANSVISMFVK-SDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 315 SEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNAL 374
+A KL S + + ++ T ++LS + G +H ++K GL+ + + NAL
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 375 MNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDA 434
++MYSKCGSI ++ ++FN M R+ +SWT++I+G+ HG+ L+ F +M E GV+P+
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 435 ITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVS 494
+T +AILSAC+H GLV E FN++ ++ KI +EHYAC VDLL ++G + DA + ++
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 495 TMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNWLG 554
TMP + + + + ACR+H E+ ++ A +++E +P A Y LS + + +G W
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 555 AEEVWRVMRAKGLSKSYGFSRIE 577
+ E+ R M+ + L K G S IE
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIE 718
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 145/544 (26%), Positives = 260/544 (47%), Gaps = 17/544 (3%)
Query: 26 NTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQL 85
++ S++K+C A+ + G +H ++ + D V+ NSLIS+Y+K A +
Sbjct: 61 DSVTFSSLLKSCIRARDFR-LGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 86 FDEMPY---RDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQI 142
F+ M RD +SW++++ C+ NG + ++++F E G V +I CS
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179
Query: 143 GELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHH-WLIALRVFEQMVIRNEVSWTA 201
+ +GR ++ G FE V V +L+D++ K + + A +VF++M N V+WT
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239
Query: 202 MISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCG 261
MI+ C+ I F M G + + TL+ V ACAEL +L GK +H +A G
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG 299
Query: 262 FDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDL-SEAMKL 320
D S M+ C ++ R +F+R + V+ W+++I GY ++ +L +EA+ L
Sbjct: 300 LVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINL 359
Query: 321 FSRMRLE-RIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYS 379
FS M + +EPN T + +C S G V K GL + S+ N++++M+
Sbjct: 360 FSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFV 419
Query: 380 KCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLA 439
K + + + F ++ ++ VS+ T + G + E+A +L E+ E + A T +
Sbjct: 420 KSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFAS 479
Query: 440 ILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYAC--YVDLLGKSGKIEDACKVVSTMP 497
+LS + G +++ E + + V+ K+ L+ C + + K G I+ A +V + M
Sbjct: 480 LLSGVANVGSIRKGEQIHSQVV---KLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536
Query: 498 MKPSTRILSSLVSACRIHG-RLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNWLGAE 556
+ + +S+++ HG + V E + E N Y + CS G
Sbjct: 537 NR-NVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG---LVS 592
Query: 557 EVWR 560
E WR
Sbjct: 593 EGWR 596
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 123/229 (53%), Gaps = 7/229 (3%)
Query: 222 MQREGVKP-TRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECT 280
M R+G++P VT + +L +C RD R GK +H + D L +L+ +Y +
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 281 EALHPARIIFE---RTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLL 337
++ A +FE R +DVV WS+++ Y +G +A+K+F + PN
Sbjct: 112 DSAK-AEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYT 170
Query: 338 AILSSCTRQSFLSHGLGVHCYIMKAG-LNFDVSIGNALMNMYSKC-GSITSSHQIFNEMA 395
A++ +C+ F+ G ++MK G DV +G +L++M+ K S +++++F++M+
Sbjct: 171 AVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS 230
Query: 396 ARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSAC 444
+ V+WT +I+ G+ EA++ FL+M SG E D T+ ++ SAC
Sbjct: 231 ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 5/192 (2%)
Query: 310 QSGDLSEAMKLFSRMRLERIEP-NSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDV 368
+GDL A+ M + I P +SVT ++L SC R G VH +++ + D
Sbjct: 38 NAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDS 97
Query: 369 SIGNALMNMYSKCGSITSSHQIFNEM---AARDFVSWTTLISGYGFHGYGEEALQLFLEM 425
+ N+L+++YSK G + +F M RD VSW+ +++ YG +G +A+++F+E
Sbjct: 98 VLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEF 157
Query: 426 QESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKS-G 484
E G+ P+ A++ AC+++ V +MK + +D+ K
Sbjct: 158 LELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGEN 217
Query: 485 KIEDACKVVSTM 496
E+A KV M
Sbjct: 218 SFENAYKVFDKM 229
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 296 bits (758), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 174/580 (30%), Positives = 303/580 (52%), Gaps = 40/580 (6%)
Query: 32 SVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMY-AKFSKPES-AYQLFDEM 89
S++ C +T F QLH ++ G +P L + ++ S AY+LF ++
Sbjct: 39 SILGVC---KTTDQFK-QLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKI 94
Query: 90 PYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIIS-LCSQIGELELG 148
P D + WN++I +++ + ++ M G + +++ L G L G
Sbjct: 95 PEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACG 154
Query: 149 RQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCID 208
+++H V+ G +++V AL+ +YS C +A VF++ + SW MISG
Sbjct: 155 KKLHCHVVKFG-LGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 209 SQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHL 268
+ Y+ I+L M+R V PT VTL +VL AC++++D K +H Y C + L
Sbjct: 214 MKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRL 273
Query: 269 SAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDL-------------- 314
AL++ Y C E RI F K +DV+ W+SI++GY + G+L
Sbjct: 274 ENALVNAYAACGEMDIAVRI-FRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRD 332
Query: 315 -----------------SEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHC 357
+E++++F M+ + P+ T++++L++C L G +
Sbjct: 333 RISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKT 392
Query: 358 YIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEE 417
YI K + DV +GNAL++MY KCG + ++F++M RD +WT ++ G +G G+E
Sbjct: 393 YIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQE 452
Query: 418 ALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYV 477
A+++F +MQ+ ++PD IT L +LSACNH+G+V +A F + + +I ++ HY C V
Sbjct: 453 AIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMV 512
Query: 478 DLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAA 537
D+LG++G +++A +++ MPM P++ + +L+ A R+H +AE+ A +++E EP+N A
Sbjct: 513 DMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGA 572
Query: 538 NYTLLSMVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
Y LL + + W EV R + + K+ GFS IE
Sbjct: 573 VYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIE 612
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 296 bits (757), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 174/552 (31%), Positives = 291/552 (52%), Gaps = 3/552 (0%)
Query: 26 NTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQL 85
+T++L V+KAC + ++ +G LH A+K+ + + +SL+ MY + K + + ++
Sbjct: 107 DTSVLSVVLKACGQS-SNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRV 165
Query: 86 FDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGEL 145
F EMP+R+ ++W +II G Y L F EM + A + C+ + ++
Sbjct: 166 FSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQV 225
Query: 146 ELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISG 205
+ G+ IH VIV G F ++ V+ +L +Y++C L +FE M R+ VSWT++I
Sbjct: 226 KYGKAIHTHVIVRG-FVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVA 284
Query: 206 CIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFD 265
++ F M+ V P T + ACA L L G+ +H G +
Sbjct: 285 YKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDS 344
Query: 266 HHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMR 325
+S ++M MY C L A ++F+ + +D++ WS+II GY Q+G E K FS MR
Sbjct: 345 LSVSNSMMKMYSTCGN-LVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMR 403
Query: 326 LERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSIT 385
+P L ++LS + + G VH + GL + ++ ++L+NMYSKCGSI
Sbjct: 404 QSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIK 463
Query: 386 SSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACN 445
+ IF E D VS T +I+GY HG +EA+ LF + + G PD++T +++L+AC
Sbjct: 464 EASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACT 523
Query: 446 HAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRIL 505
H+G + FN + + + A EHY C VDLL ++G++ DA K+++ M K +
Sbjct: 524 HSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVW 583
Query: 506 SSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNWLGAEEVWRVMRAK 565
++L+ AC+ G +E A +++E +P A L+ + S +GN A V + M+AK
Sbjct: 584 TTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAK 643
Query: 566 GLSKSYGFSRIE 577
G+ K G+S I+
Sbjct: 644 GVIKEPGWSSIK 655
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 146/322 (45%), Gaps = 23/322 (7%)
Query: 262 FDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLF 321
FD + HL + + L AR +F++ D+V W+SII+ Y + + EA+ LF
Sbjct: 41 FDPNSHLRSLIN------AGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILF 94
Query: 322 SRMRL--ERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYS 379
S MR+ + P++ L +L +C + S +++G +H Y +K L V +G++L++MY
Sbjct: 95 SAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYK 154
Query: 380 KCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLA 439
+ G I S ++F+EM R+ V+WT +I+G G +E L F EM S D T
Sbjct: 155 RVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAI 214
Query: 440 ILSACNHAGLVKEAETLFNNVMKEKKI-------ALAIEHYACYVDLLGKSGKIEDACKV 492
L AC VK + + +V+ + +LA + C G+++D +
Sbjct: 215 ALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTEC--------GEMQDGLCL 266
Query: 493 VSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNW 552
M + S +V+ RI ++ E P N + + C+
Sbjct: 267 FENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRL 326
Query: 553 LGAEEVWRVMRAKGLSKSYGFS 574
+ E++ + + GL+ S S
Sbjct: 327 VWGEQLHCNVLSLGLNDSLSVS 348
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 291 bits (745), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 168/542 (30%), Positives = 280/542 (51%), Gaps = 5/542 (0%)
Query: 38 AYAQTHQHFGLQLHCTALKS-GSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTIS 96
A + + G +H +K+ S P ++N LI+MY+K PESA + P R+ +S
Sbjct: 16 AISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVS 75
Query: 97 WNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVI 156
W S+I+ QNG + +L F EM G V + + G+QIHAL +
Sbjct: 76 WTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAV 135
Query: 157 VDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGI 216
G L VFV + D+Y K A ++F+++ RN +W A IS + I
Sbjct: 136 KCGRI-LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAI 194
Query: 217 DLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMY 276
+ F +R P +T L AC++ L G +HG GFD D + L+ Y
Sbjct: 195 EAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFY 254
Query: 277 CECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTL 336
+C + + + IIF K+ V W S++ Y Q+ + +A L+ R R + +E + +
Sbjct: 255 GKCKQ-IRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMI 313
Query: 337 LAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAA 396
++LS+C + L G +H + +KA + + +G+AL++MY KCG I S Q F+EM
Sbjct: 314 SSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPE 373
Query: 397 RDFVSWTTLISGYGFHGYGEEALQLFLEMQESGV--EPDAITVLAILSACNHAGLVKEAE 454
++ V+ +LI GY G + AL LF EM G P+ +T +++LSAC+ AG V+
Sbjct: 374 KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGM 433
Query: 455 TLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRI 514
+F+++ I EHY+C VD+LG++G +E A + + MP++P+ + +L +ACR+
Sbjct: 434 KIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRM 493
Query: 515 HGRLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNWLGAEEVWRVMRAKGLSKSYGFS 574
HG+ ++ + A L + +P+++ N+ LLS + +G W A V ++ G+ K G+S
Sbjct: 494 HGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYS 553
Query: 575 RI 576
I
Sbjct: 554 WI 555
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 218/445 (48%), Gaps = 12/445 (2%)
Query: 126 VLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIAL 185
+L A+ L ++ + LGR +HA ++ F++ L+++YSK H A
Sbjct: 3 LLSADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESAR 62
Query: 186 RVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELR 245
V RN VSWT++ISG + ++ T + F M+REGV P T A A LR
Sbjct: 63 LVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLR 122
Query: 246 DLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSII 305
GK IH A CG D + + MYC+ T AR +F+ +++ W++ I
Sbjct: 123 LPVTGKQIHALAVKCGRILDVFVGCSAFDMYCK-TRLRDDARKLFDEIPERNLETWNAFI 181
Query: 306 RGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLN 365
G EA++ F R PNS+T A L++C+ L+ G+ +H ++++G +
Sbjct: 182 SNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFD 241
Query: 366 FDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEM 425
DVS+ N L++ Y KC I SS IF EM ++ VSW +L++ Y + E+A L+L
Sbjct: 242 TDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRS 301
Query: 426 QESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMK---EKKIALAIEHYACYVDLLGK 482
++ VE + ++LSAC ++ ++ + +K E+ I + + VD+ GK
Sbjct: 302 RKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG----SALVDMYGK 357
Query: 483 SGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANY-TL 541
G IED+ + MP K + +SL+ G++++A L ++ NY T
Sbjct: 358 CGCIEDSEQAFDEMPEK-NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTF 416
Query: 542 LSMV--CSESGNWLGAEEVWRVMRA 564
+S++ CS +G +++ MR+
Sbjct: 417 VSLLSACSRAGAVENGMKIFDSMRS 441
>sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protein At1g06140,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2
SV=1
Length = 558
Score = 290 bits (743), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 175/544 (32%), Positives = 304/544 (55%), Gaps = 10/544 (1%)
Query: 40 AQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMP--YRDTISW 97
A+T H Q+H + G + + V+ +SL + Y + ++ + A F+ +P R+ SW
Sbjct: 17 AKTLNHTQ-QVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSW 75
Query: 98 NSIINCFTQNGF--YVRSLEMFREMYL-CGFVLKAELLAGIISLCSQIGELELGRQIHAL 154
N+I++ ++++ Y L ++ M C V L+ I + C +G LE G IH L
Sbjct: 76 NTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKA-CVGLGLLENGILIHGL 134
Query: 155 VIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDT 214
+ +G + +V+ +L+++Y++ A +VF+++ +RN V W ++ G +
Sbjct: 135 AMKNG-LDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPE 193
Query: 215 GIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGF-DFDHHLSAALM 273
LF M+ G+ +TL ++ AC + + GK +HG + F D +L A+++
Sbjct: 194 VFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASII 253
Query: 274 HMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNS 333
MY +C L AR +FE + ++VV+W+++I G+++ EA LF +M E I PN
Sbjct: 254 DMYVKC-RLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQ 312
Query: 334 VTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNE 393
TL AIL SC+ L HG VH Y+++ G+ D + ++MY++CG+I + +F+
Sbjct: 313 CTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDM 372
Query: 394 MAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEA 453
M R+ +SW+++I+ +G +G EEAL F +M+ V P+++T +++LSAC+H+G VKE
Sbjct: 373 MPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEG 432
Query: 454 ETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACR 513
F ++ ++ + EHYAC VDLLG++G+I +A + MP+KP +L+SACR
Sbjct: 433 WKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACR 492
Query: 514 IHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNWLGAEEVWRVMRAKGLSKSYGF 573
IH +++A +A +L+ EPE ++ Y LLS + +++G W V R M KG K G
Sbjct: 493 IHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQ 552
Query: 574 SRIE 577
S E
Sbjct: 553 SATE 556
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 220/444 (49%), Gaps = 19/444 (4%)
Query: 7 YEQTLHLY-KQELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVI 65
Y L LY + H G+ S + IKAC ++ G+ +H A+K+G D D +
Sbjct: 90 YSDVLLLYNRMRRHCDGVDSFNLVF--AIKACVGLGLLEN-GILIHGLAMKNGLDKDDYV 146
Query: 66 SNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYL--- 122
+ SL+ MYA+ ESA ++FDE+P R+++ W ++ + + Y + E+FR L
Sbjct: 147 APSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLK---YSKDPEVFRLFCLMRD 203
Query: 123 CGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWL 182
G L A L ++ C + ++G+ +H + I + S ++ +++D+Y KC
Sbjct: 204 TGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLD 263
Query: 183 IALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACA 242
A ++FE V RN V WT +ISG + DLFR M RE + P + TL +L++C+
Sbjct: 264 NARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCS 323
Query: 243 ELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWS 302
L LR+GK++HGY G + D + + MY C + AR +F+ ++V+ WS
Sbjct: 324 SLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGN-IQMARTVFDMMPERNVISWS 382
Query: 303 SIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLG-VHCYIMK 361
S+I + +G EA+ F +M+ + + PNSVT +++LS+C+ + G
Sbjct: 383 SMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRD 442
Query: 362 AGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVS-WTTLISGYGFHGYGEEALQ 420
G+ + ++++ + G I + + M + S W L+S H + +
Sbjct: 443 YGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIH----KEVD 498
Query: 421 LFLEMQES--GVEPDAITVLAILS 442
L E+ E +EP+ +V +LS
Sbjct: 499 LAGEIAEKLLSMEPEKSSVYVLLS 522
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 221/454 (48%), Gaps = 17/454 (3%)
Query: 134 GIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVI 193
++++ SQ L +Q+HA VI+ G FE V + ++L + Y + + A F ++
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHG-FEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPC 67
Query: 194 --RNEVSWTAMISGCIDSQN--YDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRN 249
RN SW ++SG S+ Y + L+ M+R L + AC L L N
Sbjct: 68 WKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLEN 127
Query: 250 GKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYS 309
G IHG A G D D +++ +L+ MY + + A+ +F+ V++ V+W +++GY
Sbjct: 128 GILIHGLAMKNGLDKDDYVAPSLVEMYAQLG-TMESAQKVFDEIPVRNSVLWGVLMKGYL 186
Query: 310 QSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVH-CYIMKAGLNFDV 368
+ E +LF MR + +++TL+ ++ +C G VH I ++ ++
Sbjct: 187 KYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSD 246
Query: 369 SIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQES 428
+ ++++MY KC + ++ ++F R+ V WTTLISG+ EA LF +M
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306
Query: 429 GVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIED 488
+ P+ T+ AIL +C+ G ++ +++ + M I + ++ ++D+ + G I+
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSV-HGYMIRNGIEMDAVNFTSFIDMYARCGNIQM 365
Query: 489 ACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAE--PENAANYTLLSMVC 546
A V MP + SS+++A I+G E A H++ P + +LLS C
Sbjct: 366 ARTVFDMMPERNVIS-WSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLS-AC 423
Query: 547 SESGNWLGAEEVWRVMRAKGLSKSYGFSRIENEY 580
S SGN +E W+ + + +++ YG E Y
Sbjct: 424 SHSGN---VKEGWK--QFESMTRDYGVVPEEEHY 452
>sp|O82363|PP203_ARATH Pentatricopeptide repeat-containing protein At2g46050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E39 PE=3
SV=1
Length = 590
Score = 290 bits (742), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 172/516 (33%), Positives = 280/516 (54%), Gaps = 24/516 (4%)
Query: 49 QLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQN- 107
Q H +K G + N L+ Y K + + A +LFDEMP R+ ++WN +I+ Q
Sbjct: 57 QEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRD 116
Query: 108 ---------GFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVD 158
GF S +F ++ L G+I LC+ ++ G Q+H L++
Sbjct: 117 GDTNHRAHLGFCYLSRILFTDV-----SLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQ 171
Query: 159 GSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDL 218
G E S F ST+L+ Y KC + A RVFE ++ R+ V W A++S + + D L
Sbjct: 172 G-LESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGL 230
Query: 219 FRAM--QREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMY 276
+ M + + T + +L AC + GK IH + + FD ++ AL++MY
Sbjct: 231 LKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMY 286
Query: 277 CECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTL 336
+ + L AR FE V++VV W+++I G++Q+G+ EAM+LF +M LE ++P+ +T
Sbjct: 287 AK-SNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTF 345
Query: 337 LAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAA 396
++LSSC + S + V + K G +S+ N+L++ YS+ G+++ + F+ +
Sbjct: 346 ASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIRE 405
Query: 397 RDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETL 456
D VSWT++I HG+ EE+LQ+F M + ++PD IT L +LSAC+H GLV+E
Sbjct: 406 PDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRC 464
Query: 457 FNNVMKEKKIALAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHG 516
F + + KI EHY C +DLLG++G I++A V+++MP +PST L++ C IH
Sbjct: 465 FKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHE 524
Query: 517 RLEVAEMLAHQLIEAEPENAANYTLLSMVCSESGNW 552
+ E + A +L+E EP NY++LS G+W
Sbjct: 525 KRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHW 560
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 289 bits (740), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 158/509 (31%), Positives = 270/509 (53%), Gaps = 35/509 (6%)
Query: 69 LISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLK 128
L+ YA SA ++FDE+P R+ I N +I + NGFY +++F M C
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 129 AELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVF 188
++ CS G + +GR+IH G ++FV L+ +Y KC A V
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVG-LSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 189 EQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLR 248
++M R+ VSW +++ G +Q +D +++ R M+ + T+ +L A +
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSN----- 253
Query: 249 NGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGY 308
TE + + +F + K +V W+ +I Y
Sbjct: 254 -----------------------------TTTENVMYVKDMFFKMGKKSLVSWNVMIGVY 284
Query: 309 SQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDV 368
++ EA++L+SRM + EP++V++ ++L +C S LS G +H YI + L ++
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344
Query: 369 SIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQES 428
+ NAL++MY+KCG + + +F M +RD VSWT +IS YGF G G +A+ LF ++Q+S
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404
Query: 429 GVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLGKSGKIED 488
G+ PD+I + L+AC+HAGL++E + F + KI +EH AC VDLLG++GK+++
Sbjct: 405 GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKE 464
Query: 489 ACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEAEPENAANYTLLSMVCSE 548
A + + M M+P+ R+ +L+ ACR+H ++ + A +L + PE + Y LLS + ++
Sbjct: 465 AYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAK 524
Query: 549 SGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
+G W + +M++KGL K+ G S +E
Sbjct: 525 AGRWEEVTNIRNIMKSKGLKKNPGASNVE 553
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 151/323 (46%), Gaps = 36/323 (11%)
Query: 30 LPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEM 89
P V+KAC+ + T G ++H +A K G + + N L+SMY K A + DEM
Sbjct: 143 FPCVLKACSCSGTIV-IGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEM 201
Query: 90 PYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGR 149
RD +SWNS++ + QN + +LE+ REM A +A ++ S
Sbjct: 202 SRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSN-------- 253
Query: 150 QIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDS 209
+T +Y K +F +M ++ VSW MI + +
Sbjct: 254 ------------------TTTENVMYVK--------DMFFKMGKKSLVSWNVMIGVYMKN 287
Query: 210 QNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLS 269
++L+ M+ +G +P V++T VL AC + L GK IHGY + L
Sbjct: 288 AMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE 347
Query: 270 AALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERI 329
AL+ MY +C L AR +FE K +DVV W+++I Y SG +A+ LFS+++ +
Sbjct: 348 NALIDMYAKCG-CLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406
Query: 330 EPNSVTLLAILSSCTRQSFLSHG 352
P+S+ + L++C+ L G
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEG 429
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 183/405 (45%), Gaps = 42/405 (10%)
Query: 149 RQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCID 208
R +H+ +I++ + + L+ Y+ A +VF+++ RN + MI ++
Sbjct: 59 RTVHSRIILE-DLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVN 117
Query: 209 SQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHL 268
+ Y G+ +F M V+P T VL AC+ + G+ IHG A G +
Sbjct: 118 NGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFV 177
Query: 269 SAALMHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLER 328
L+ MY +C L AR++ + +DVV W+S++ GY+Q+ +A+++ M +
Sbjct: 178 GNGLVSMYGKCG-FLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236
Query: 329 IEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSH 388
I ++ T+ ++L + + + + N MY K
Sbjct: 237 ISHDAGTMASLLPAVS----------------------NTTTENV---MYVK-------- 263
Query: 389 QIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSACNHAG 448
+F +M + VSW +I Y + EA++L+ M+ G EPDA+++ ++L AC
Sbjct: 264 DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTS 323
Query: 449 LVKEAETLFNNVMKEKKIA-LAIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSS 507
+ + + + ++K I L +E+ +D+ K G +E A V M + ++
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLEN--ALIDMYAKCGCLEKARDVFENMKSRDVVS-WTA 380
Query: 508 LVSACRIHGRLEVAEMLAHQLIEAE--PENAANYTLLSMVCSESG 550
++SA GR A L +L ++ P++ A T L+ CS +G
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLA-ACSHAG 424
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 164/349 (46%), Gaps = 34/349 (9%)
Query: 246 DLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIWSSII 305
D+R + +H + L LM Y + + AR +F+ ++V+I + +I
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKD-VASARKVFDEIPERNVIIINVMI 112
Query: 306 RGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLN 365
R Y +G E +K+F M + P+ T +L +C+ + G +H K GL+
Sbjct: 113 RSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172
Query: 366 FDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEM 425
+ +GN L++MY KCG ++ + + +EM+ RD VSW +L+ GY + ++AL++ EM
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 232
Query: 426 QESGVEPDAITVLAILSACNHAGL--VKEAETLFNNVMKEK------------KIALAIE 471
+ + DA T+ ++L A ++ V + +F + K+ K A+ +E
Sbjct: 233 ESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVE 292
Query: 472 HYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLIEA 531
Y + G DA + S +P T S+L +IHG +E +++ + L+
Sbjct: 293 AVELY-SRMEADGFEPDAVSITSVLPACGDT---SALSLGKKIHGYIERKKLIPNLLL-- 346
Query: 532 EPENAANYTLLSMVCSESGNWLGAEEVWRVMRAK------GLSKSYGFS 574
ENA L+ M ++ G A +V+ M+++ + +YGFS
Sbjct: 347 --ENA----LIDMY-AKCGCLEKARDVFENMKSRDVVSWTAMISAYGFS 388
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 188/484 (38%), Gaps = 83/484 (17%)
Query: 63 PVISNSLIS--MYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREM 120
P +SN+ MY K +F +M + +SWN +I + +N V ++E++ M
Sbjct: 249 PAVSNTTTENVMYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRM 300
Query: 121 YLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHH 180
GF A + ++ C L LG++IH I ++ + AL+D+Y+KC
Sbjct: 301 EADGFEPDAVSITSVLPACGDTSALSLGKKIHGY-IERKKLIPNLLLENALIDMYAKCGC 359
Query: 181 WLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLA 240
A VFE M R+ VSWTAMIS S + LF +Q G+ P + L A
Sbjct: 360 LEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAA 419
Query: 241 CAELRDLRNGKAIHGYAYCCGFDFDHH-LSAALMHMYCECTEALHPARIIFERTKVKDVV 299
C+ L G++ C DH+ ++ L H+ C
Sbjct: 420 CSHAGLLEEGRS------CFKLMTDHYKITPRLEHLAC---------------------- 451
Query: 300 IWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYI 359
++ ++G + EA + M + EPN A+L +C S GL
Sbjct: 452 ----MVDLLGRAGKVKEAYRFIQDMSM---EPNERVWGALLGACRVHSDTDIGL------ 498
Query: 360 MKAGLNFDVSIGNA-----LMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGY 414
+ A F ++ + L N+Y+K G I N M ++ L G
Sbjct: 499 LAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSK------GLKKNPGASNV 552
Query: 415 G-EEALQLFLEMQESGVEPDAI--TVLAILSACNHAGLVKEAETLFNNVMKEKK---IAL 468
+ FL S + D I + ++ G V ++E+ ++V +E K +A+
Sbjct: 553 EVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAV 612
Query: 469 AIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQL 528
E A L+ + ED+ + RI +L RI G VA L Q+
Sbjct: 613 HSEKLAIVFALMNTKEEEEDSNNTI---------RITKNL----RICGDCHVAAKLISQI 659
Query: 529 IEAE 532
E
Sbjct: 660 TSRE 663
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 289 bits (739), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 187/585 (31%), Positives = 293/585 (50%), Gaps = 29/585 (4%)
Query: 16 QELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAK 75
+E+ + +I SV+++CA A + G QLH ALKS AD ++ + + MYAK
Sbjct: 270 KEMQKVNAGVSQSIYASVLRSCA-ALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAK 328
Query: 76 FSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGI 135
+ A LFD + S+N++I ++Q ++L +F + G L+G+
Sbjct: 329 CDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGV 388
Query: 136 ISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRN 195
C+ + L G QI+ L I S L V V+ A +D+Y KC A RVF++M R+
Sbjct: 389 FRACALVKGLSEGLQIYGLAI-KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRD 447
Query: 196 EVSWTAMISGC-IDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIH 254
VSW A+I+ + + Y+T + LF +M R ++P T +L AC L G IH
Sbjct: 448 AVSWNAIIAAHEQNGKGYET-LFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIH 505
Query: 255 GYAYCCGFDFDHHLSAALMHMYCEC-----TEALHPARIIFERTKVKDV----------- 298
G + + +L+ MY +C E +H F+R V
Sbjct: 506 SSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSR--FFQRANVSGTMEELEKMHNKR 563
Query: 299 -----VIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGL 353
V W+SII GY +A LF+RM I P+ T +L +C + G
Sbjct: 564 LQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGK 623
Query: 354 GVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHG 413
+H ++K L DV I + L++MYSKCG + S +F + RDFV+W +I GY HG
Sbjct: 624 QIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHG 683
Query: 414 YGEEALQLFLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHY 473
GEEA+QLF M ++P+ +T ++IL AC H GL+ + F + ++ + + HY
Sbjct: 684 KGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHY 743
Query: 474 ACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIH-GRLEVAEMLAHQLIEAE 532
+ VD+LGKSGK++ A +++ MP + I +L+ C IH +EVAE L+ +
Sbjct: 744 SNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLD 803
Query: 533 PENAANYTLLSMVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIE 577
P++++ YTLLS V +++G W ++ R MR L K G S +E
Sbjct: 804 PQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVE 848
Score = 232 bits (592), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 138/433 (31%), Positives = 239/433 (55%), Gaps = 4/433 (0%)
Query: 62 DPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLEMFREMY 121
D V N +I+ Y+K + A F+ MP RD +SWNS+++ + QNG ++S+E+F +M
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 172
Query: 122 LCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHW 181
G A I+ +CS + + LG QIH +V+ G + V ++ALLD+Y+K +
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC-DTDVVAASALLDMYAKGKRF 231
Query: 182 LIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLAC 241
+ +LRVF+ + +N VSW+A+I+GC+ + + F+ MQ+ ++ VL +C
Sbjct: 232 VESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSC 291
Query: 242 AELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFERTKVKDVVIW 301
A L +LR G +H +A F D + A + MY +C + + A+I+F+ ++ + +
Sbjct: 292 AALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKC-DNMQDAQILFDNSENLNRQSY 350
Query: 302 SSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMK 361
+++I GYSQ +A+ LF R+ + + ++L + +C LS GL ++ +K
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 410
Query: 362 AGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQL 421
+ L+ DV + NA ++MY KC ++ + ++F+EM RD VSW +I+ + +G G E L L
Sbjct: 411 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 470
Query: 422 FLEMQESGVEPDAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYACYVDLLG 481
F+ M S +EPD T +IL AC L E + ++++K +A +D+
Sbjct: 471 FVSMLRSRIEPDEFTFGSILKACTGGSLGYGME-IHSSIVK-SGMASNSSVGCSLIDMYS 528
Query: 482 KSGKIEDACKVVS 494
K G IE+A K+ S
Sbjct: 529 KCGMIEEAEKIHS 541
Score = 222 bits (565), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 150/541 (27%), Positives = 266/541 (49%), Gaps = 31/541 (5%)
Query: 33 VIKACAYAQTHQHFGLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYR 92
++K C++ + G+Q+H ++ G D D V +++L+ MYAK + + ++F +P +
Sbjct: 186 ILKVCSFLED-TSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK 244
Query: 93 DTISWNSIINCFTQNGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIH 152
+++SW++II QN +L+ F+EM + + A ++ C+ + EL LG Q+H
Sbjct: 245 NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLH 304
Query: 153 ALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNY 212
A + F V TA LD+Y+KC + A +F+ N S+ AMI+G ++
Sbjct: 305 AHAL-KSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHG 363
Query: 213 DTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAAL 272
+ LF + G+ ++L+ V ACA ++ L G I+G A D ++ A
Sbjct: 364 FKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA 423
Query: 273 MHMYCECTEALHPARIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPN 332
+ MY +C +AL A +F+ + +D V W++II + Q+G E + LF M RIEP+
Sbjct: 424 IDMYGKC-QALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPD 482
Query: 333 SVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFN 392
T +IL +CT S L +G+ +H I+K+G+ + S+G +L++MYSKCG I + +I +
Sbjct: 483 EFTFGSILKACTGGS-LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHS 541
Query: 393 EMAARDF--------------------VSWTTLISGYGFHGYGEEALQLFLEMQESGVEP 432
R VSW ++ISGY E+A LF M E G+ P
Sbjct: 542 RFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITP 601
Query: 433 DAITVLAILSACNHAGLVKEAETLFNNVMKEKKIALAIEHYAC--YVDLLGKSGKIEDAC 490
D T +L C + + + V+K++ L + Y C VD+ K G + D+
Sbjct: 602 DKFTYATVLDTCANLASAGLGKQIHAQVIKKE---LQSDVYICSTLVDMYSKCGDLHDS- 657
Query: 491 KVVSTMPMKPSTRILSSLVSACRIHGRLEVA-EMLAHQLIEAEPENAANYTLLSMVCSES 549
+++ ++ ++++ HG+ E A ++ ++E N + + C+
Sbjct: 658 RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHM 717
Query: 550 G 550
G
Sbjct: 718 G 718
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 288 bits (738), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 162/470 (34%), Positives = 261/470 (55%), Gaps = 4/470 (0%)
Query: 112 RSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTAL 171
R E EM + G + +++ C L G+++HA +I + + ++ T L
Sbjct: 35 RLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMI-KTRYLPATYLRTRL 93
Query: 172 LDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTR 231
L Y KC A +V ++M +N VSWTAMIS + + + +F M R KP
Sbjct: 94 LIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNE 153
Query: 232 VTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPARIIFE 291
T VL +C L GK IHG +D + ++L+ MY + + + AR IFE
Sbjct: 154 FTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ-IKEAREIFE 212
Query: 292 RTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQSFLSH 351
+DVV ++II GY+Q G EA+++F R+ E + PN VT ++L++ + + L H
Sbjct: 213 CLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDH 272
Query: 352 GLGVHCYIMKAGLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAARDFVSWTTLISGYGF 411
G HC++++ L F + N+L++MYSKCG+++ + ++F+ M R +SW ++ GY
Sbjct: 273 GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSK 332
Query: 412 HGYGEEALQLFLEMQ-ESGVEPDAITVLAILSACNHAGLVKEAETLFNN-VMKEKKIALA 469
HG G E L+LF M+ E V+PDA+T+LA+LS C+H + +F+ V E
Sbjct: 333 HGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPG 392
Query: 470 IEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQLI 529
EHY C VD+LG++G+I++A + + MP KP+ +L SL+ ACR+H +++ E + +LI
Sbjct: 393 TEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLI 452
Query: 530 EAEPENAANYTLLSMVCSESGNWLGAEEVWRVMRAKGLSKSYGFSRIENE 579
E EPENA NY +LS + + +G W V +M K ++K G S I++E
Sbjct: 453 EIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHE 502
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 177/354 (50%), Gaps = 5/354 (1%)
Query: 47 GLQLHCTALKSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQ 106
G ++H +K+ + L+ Y K E A ++ DEMP ++ +SW ++I+ ++Q
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130
Query: 107 NGFYVRSLEMFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVF 166
G +L +F EM A +++ C + L LG+QIH L IV +++ +F
Sbjct: 131 TGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL-IVKWNYDSHIF 189
Query: 167 VSTALLDLYSKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREG 226
V ++LLD+Y+K A +FE + R+ VS TA+I+G + +++F + EG
Sbjct: 190 VGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEG 249
Query: 227 VKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPA 286
+ P VT +L A + L L +GK H + F L +L+ MY +C L A
Sbjct: 250 MSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN-LSYA 308
Query: 287 RIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLE-RIEPNSVTLLAILSSCTR 345
R +F+ + + W++++ GYS+ G E ++LF MR E R++P++VTLLA+LS C+
Sbjct: 309 RRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSH 368
Query: 346 QSFLSHGLGVHCYIMKA--GLNFDVSIGNALMNMYSKCGSITSSHQIFNEMAAR 397
GL + ++ G +++M + G I + + M ++
Sbjct: 369 GRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 122/251 (48%), Gaps = 10/251 (3%)
Query: 1 MVSKHFYEQTLHLYKQ-----ELHPSGLYSNTAILPSVIKACAYAQTHQHFGLQLHCTAL 55
M+S+ Y QT H + E+ S N +V+ +C A + G Q+H +
Sbjct: 124 MISR--YSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRA-SGLGLGKQIHGLIV 180
Query: 56 KSGSDADPVISNSLISMYAKFSKPESAYQLFDEMPYRDTISWNSIINCFTQNGFYVRSLE 115
K D+ + +SL+ MYAK + + A ++F+ +P RD +S +II + Q G +LE
Sbjct: 181 KWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALE 240
Query: 116 MFREMYLCGFVLKAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLY 175
MF ++ G A +++ S + L+ G+Q H V+ + +L+D+Y
Sbjct: 241 MFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRR-ELPFYAVLQNSLIDMY 299
Query: 176 SKCHHWLIALRVFEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREG-VKPTRVTL 234
SKC + A R+F+ M R +SW AM+ G ++LFR M+ E VKP VTL
Sbjct: 300 SKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTL 359
Query: 235 TIVLLACAELR 245
VL C+ R
Sbjct: 360 LAVLSGCSHGR 370
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 203,089,936
Number of Sequences: 539616
Number of extensions: 7917900
Number of successful extensions: 25801
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 17551
Number of HSP's gapped (non-prelim): 2341
length of query: 580
length of database: 191,569,459
effective HSP length: 123
effective length of query: 457
effective length of database: 125,196,691
effective search space: 57214887787
effective search space used: 57214887787
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)