BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041390
(639 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224104191|ref|XP_002313352.1| predicted protein [Populus trichocarpa]
gi|222849760|gb|EEE87307.1| predicted protein [Populus trichocarpa]
Length = 685
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/702 (58%), Positives = 492/702 (70%), Gaps = 80/702 (11%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MDSYEAT +VFSRI++++PENASKIMGYLL+QD G+KEMIRLAFGPETLL NLI + KT
Sbjct: 1 MDSYEATNIVFSRIQSLEPENASKIMGYLLLQDYGEKEMIRLAFGPETLLQNLILQTKTQ 60
Query: 61 L---SNASASAS-----ASATNPSSLSPSSAP-------------------WLPP---AS 90
L SN ++ S +S +P +S S P L P S
Sbjct: 61 LGFPSNTPSTPSPAFIPSSRPSPLYISSSRIPNNNGFDITNSSSPSTNSWPLLSPNSTTS 120
Query: 91 LSYANVVNGSS---CSSTNAAASASESLYYSNISNNNSYASSDIADDFHQFQDHLSFLDE 147
LSYA+VVNG+S ST + S S +S SNNN A+ D+ D++ + Q+ SFL++
Sbjct: 121 LSYASVVNGASNINAGSTPFQPTVSLSKAFS-YSNNNDNAN-DLVDEY-ELQERFSFLND 177
Query: 148 S---------SELASSTDADHHNHHHLLKRSLSLPVHPNVCFGSDDDPNSGLGWKHCLYF 198
S ELA S A N H KRS S+P +CFGS+D NSG GWK CLYF
Sbjct: 178 SKTDDLFDPRGELAMSPPAFGDNSLH--KRSFSVP---GMCFGSEDS-NSGFGWKPCLYF 231
Query: 199 AKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQRKLAAAS 258
++GFCKNGT C+F H ++A +AAIVGSPS+L+EFE QE+L RSKA+ QQRKLAAAS
Sbjct: 232 SRGFCKNGTGCRFVH---GDSADSAAIVGSPSELNEFEQCQEIL-RSKAAAQQRKLAAAS 287
Query: 259 QFMGS---FPYNKCMNFL----NDTQRSAA---LMMGDELHNKFGTCSRPERNDF----- 303
QFM P NKCMNFL N++QRSAA LMMGDE+H KFG RPER+DF
Sbjct: 288 QFMAGATFLPQNKCMNFLHQQQNESQRSAAAAALMMGDEIH-KFGRI-RPERSDFSQMGL 345
Query: 304 FGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETV 363
G+M+PSARQIYLTFPADSTFREEDVS+YFS YGPV DVRIPYQQKRMFGFVTFV+ ETV
Sbjct: 346 GGAMSPSARQIYLTFPADSTFREEDVSSYFSFYGPVQDVRIPYQQKRMFGFVTFVFAETV 405
Query: 364 KLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSG-----P 418
KLILAKGNPHFVCDSRVLVKPYKEKGKV +KK QQ QQQ+ER EY SAC SPS P
Sbjct: 406 KLILAKGNPHFVCDSRVLVKPYKEKGKVPDKKHQQ-QQQIEREEY-SACPSPSRINCREP 463
Query: 419 FDFHFGGRMLYNNQEMLRRKLEEQADLQQAIEMQGRRLMNLQLHLKNNHLNHQFHHGLSN 478
FD H GGRM YN QEMLRRKLEE+ADLQQAIE+Q RRL+NLQL NH H++ HGLS
Sbjct: 464 FDLHLGGRMFYNTQEMLRRKLEEEADLQQAIELQERRLLNLQLLDLKNHRQHRYFHGLST 523
Query: 479 GSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQITDHLFHREENRTSNHN 538
GSP+PSPT+ HSPNN+T FP +G D+EV E+G +P + +E + ++
Sbjct: 524 GSPLPSPTILHSPNNQTLFFPIDGIDKEVQHAENGSNPDAAAAQNAVADADQEVSPACNH 583
Query: 539 KNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSAGGHITVFSSASAEVDEKNT 598
+ N + DKEEK NSDE+DL ++LEHILPDNLF SPKKSAG ++TVFS+AS EVD+ ++
Sbjct: 584 NDGNGNNRDKEEKSNSDESDLNENLEHILPDNLFGSPKKSAGDNLTVFSTASVEVDDNSS 643
Query: 599 SSVTST-NNNTKLPSTSLNMSSLNSCLLQMSRFSSGQGTIGM 639
S TS+ N+N +P+TSLNM+SL SC LQM R SSG GT+G+
Sbjct: 644 SLTTSSPNSNPLVPTTSLNMTSLKSCFLQMPRLSSGHGTVGI 685
>gi|255544928|ref|XP_002513525.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223547433|gb|EEF48928.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 700
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/714 (59%), Positives = 500/714 (70%), Gaps = 89/714 (12%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MDSYEATK+VFSRI+++DPENASKIMG LL+QD+GDKEMIRLAFGPETLLHNLI +AKTH
Sbjct: 1 MDSYEATKMVFSRIQSLDPENASKIMGCLLLQDHGDKEMIRLAFGPETLLHNLILQAKTH 60
Query: 61 LSNASASASASA----------------------------------TNPSSLSPSSAPWL 86
L +S + S + TNPSS S +S P L
Sbjct: 61 LGFSSNTPSTPSTPSSPSPFNPTSSRPSSLSISSSRITSNNNGFDITNPSSPSSNSWPLL 120
Query: 87 PP---ASLSYANVV-------NGSSCSSTNAAASASESLYYSNISNNNSYASSDIADDFH 136
P +SLSYA++V + + SS ++ S S + Y N ++ N+ S+D+ D++
Sbjct: 121 SPNTTSSLSYASIVNGTSNNNSNTGSSSLSSTMSLSNAFPYYNSNSTNNNTSNDLIDEY- 179
Query: 137 QFQDHLSFLDESS---------ELASSTDADHHNHHHLLKRSLSLPVHPNVCFGSDDDPN 187
Q QDH SFL++S +LA S A + HL +RS S+ P +CFGS +D N
Sbjct: 180 QLQDHFSFLNDSKTDELFDPRLDLAMSPTA--YGDTHLHRRSFSV---PGLCFGS-EDAN 233
Query: 188 SGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKA 247
SGLGWK CLYFA+GFCKNGT+C+F +H E+ A +VGSPSKLSEFE QELL A
Sbjct: 234 SGLGWKPCLYFARGFCKNGTSCRF--LHGGESGDGATLVGSPSKLSEFEQCQELLRSKAA 291
Query: 248 SVQQRKLAAASQFM--GSFPYNKCMNFL----NDTQRS---AALMMGDELHNKFGTCSRP 298
+ QQ+KLAAASQFM SFPYNKCMN L NDTQRS AALMMG+ELH KFG C RP
Sbjct: 292 AAQQQKLAAASQFMTGASFPYNKCMNLLLQQQNDTQRSAAAAALMMGEELH-KFGRC-RP 349
Query: 299 ERNDF-----FGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFG 353
ERNDF G+MNP +RQIYLTFPADSTFREEDVSNYFSIYGPV DVRIPYQQKRMFG
Sbjct: 350 ERNDFSAMGLGGAMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFG 409
Query: 354 FVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACS 413
FVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKV +KKQ QQQMERG+Y SACS
Sbjct: 410 FVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPDKKQPHQQQQMERGDY-SACS 468
Query: 414 SPSG-----PFDFHFGGRMLYNNQEM-LRRKLEEQADLQQAIEMQGRRLMNLQLHLKNNH 467
SPSG PFD H G RM N QEM LRRKLEEQA+LQQAIE+QGRRLMNLQL NH
Sbjct: 469 SPSGLDSREPFDLHLGARMFQNTQEMLLRRKLEEQAELQQAIELQGRRLMNLQLLDFKNH 528
Query: 468 LNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQITDHLF 527
+HQF HGLS GSP+PSPT S +PN++T IF +G D+EVP E G+ S+
Sbjct: 529 NHHQFLHGLSTGSPVPSPTPSRTPNSQTLIFQPDGIDQEVPEENGGIPDAVASRNGVADG 588
Query: 528 HREENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSAGGHITVFS 587
E N SNH+ N NS + EEK +++ENDL +SLEHILPDNLF SPKKSAG + TVFS
Sbjct: 589 ELEVNPVSNHS-NGNSYNSSTEEKSSTEENDLRESLEHILPDNLFTSPKKSAGDN-TVFS 646
Query: 588 SASAEVDEKNTSSVTSTNNNT-KLPSTS-LNMSSLNSCLLQMSRFSSGQGTIGM 639
+ + EVD+ +S TS++N+ LP+TS LNM+SL +C LQ+ RFSSG GTIGM
Sbjct: 647 TTALEVDDNAITSTTSSSNSNLVLPTTSTLNMTSLKTCFLQIPRFSSGHGTIGM 700
>gi|225436555|ref|XP_002274487.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Vitis vinifera]
Length = 695
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 400/713 (56%), Positives = 472/713 (66%), Gaps = 92/713 (12%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGY-LLIQDNGDKEMIRLAFGPETLLHNLIFKAKT 59
MDSYEAT++VFSRI+A+DPENASKIMGY LLIQD+G+KEMIRLAFGPETLLHNLI KAKT
Sbjct: 1 MDSYEATRIVFSRIQALDPENASKIMGYILLIQDHGEKEMIRLAFGPETLLHNLILKAKT 60
Query: 60 HL-------------------SNASASASASATNPSSLSPSS------APWLPPASLSYA 94
L S + + + NPSS P S +P A LSYA
Sbjct: 61 QLGILSNTPSTPTSPSPFNPISKPTRLPTNNGFNPSSSWPVSGFSDLRSPNSTTAQLSYA 120
Query: 95 NVVNGSS-CSSTNAAASASESLYYSNISNNNSYASSDIAD---DFHQFQDHLSFLDESS- 149
VVNG++ S +S+ S+ Y N ++++ +S D D +Q QDHLSFL+++S
Sbjct: 121 AVVNGATNVSDLGTVSSSPASIPYYNNCSSSNNSSVVCNDNVMDDYQLQDHLSFLNDASK 180
Query: 150 ---------ELASSTDADHHNHHHLLKRSLSLPVHPNVCFGSDDDPNSGLGWKHCLYFAK 200
ELA S H +RS S + C+GSDD SG GWK CLYFA+
Sbjct: 181 PEDLFDPRLELAMSPSFGETQLH---RRSYSFN---DACYGSDDGA-SGFGWKPCLYFAR 233
Query: 201 GFCKNGTACKFHHIHSPEAA-----TAAAIVGSPSKLSEFELSQELLLRSKASVQQRKLA 255
GFCKNG CKF H ++ +AAIVGSP KL FE QE+L RS QQ++LA
Sbjct: 234 GFCKNGNTCKFLHGGFADSVEASSAASAAIVGSPGKLDGFE--QEML-RS----QQQRLA 286
Query: 256 AASQFMGS--FPYNKCMNFL---NDTQRSAA--LMMGDELHNKFGTCSRPERNDF----- 303
ASQ M FPYNKCMNF N+TQRSAA LMMG+ELH KFG C RPERNDF
Sbjct: 287 VASQLMAGLNFPYNKCMNFFMQQNETQRSAAAALMMGEELH-KFGRC-RPERNDFSGMGL 344
Query: 304 FGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETV 363
G++NP +RQIYLTFPADSTFREEDVSNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETV
Sbjct: 345 GGAVNPGSRQIYLTFPADSTFREEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETV 404
Query: 364 KLILAKGNPHFVCDSRVLVKPYKEKGKVQEKK------QQQHQQQMERGEYSSACSSPSG 417
KLILAKGNPHFVCDSRVLVKPYKEKGKV EKK QQQ QQQ+ERGEYS+ CSSPSG
Sbjct: 405 KLILAKGNPHFVCDSRVLVKPYKEKGKVPEKKQQHQQQQQQQQQQLERGEYST-CSSPSG 463
Query: 418 -----PFDFHFGGRMLYNNQEM-LRRKLEEQADLQQAIEMQGRRLMNLQ-LHLK-NNHLN 469
P+D H G RM YN QEM LRRKLEEQADLQQAIE+QGRRLMNLQ L LK + H +
Sbjct: 464 IDPREPYDLHLGARMFYNTQEMLLRRKLEEQADLQQAIELQGRRLMNLQLLDLKNHQHQH 523
Query: 470 HQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPE--ESGVSPVTDSQITDHLF 527
H LS G+P+ SP+ S NN++ P +G+++EVP E S + + + D
Sbjct: 524 QHHLHNLSGGAPVASPSQSSIHNNQSLGLPSDGNNQEVPEENSSSPAATTSPTAAADKPL 583
Query: 528 HREENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSAGGHITVFS 587
+E N + N N N+S N EE N + DL +SLEHILPD+LFASP KSAG +VFS
Sbjct: 584 RQEVNISCNSNSGNDSGNNSTEESSNPADFDLHESLEHILPDSLFASPTKSAGDR-SVFS 642
Query: 588 SASAEVDEKNTSSVT-STNNNTKLPSTSLNMSSLNSCLLQMSRFSSGQGTIGM 639
+ASA VDE T S+T ++NNN LP T+LNM+SL SC +M RF SG G I M
Sbjct: 643 TASASVDESTTISITPASNNNPVLPGTTLNMASLKSCFFEMPRFPSGHGAIEM 695
>gi|147807899|emb|CAN62156.1| hypothetical protein VITISV_021251 [Vitis vinifera]
Length = 697
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 401/716 (56%), Positives = 473/716 (66%), Gaps = 96/716 (13%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGY-LLIQDNGDKEMIRLAFGPETLLHNLIFKAKT 59
MDSYEAT++VFSRI+A+DPENASKIMGY LLIQD+G+KEMIRLAFGPETLLHNLI KAKT
Sbjct: 1 MDSYEATRIVFSRIQALDPENASKIMGYILLIQDHGEKEMIRLAFGPETLLHNLILKAKT 60
Query: 60 HL-------------------SNASASASASATNPSSLSPSS------APWLPPASLSYA 94
L S + + + NPSS P S +P A LSYA
Sbjct: 61 QLGILSNTPSTPTSPSPFNPISKPTRLPTNNGFNPSSSWPVSGFSDLRSPNSTTAQLSYA 120
Query: 95 NVVNGSS-CSSTNAAASASESL-YYSNISNNNS---YASSDIADDFHQFQDHLSFLDESS 149
VVNG++ S +S+ S+ YY+N S +N+ + ++ DD+ Q QDHLSFL+++S
Sbjct: 121 AVVNGATNVSDLGTVSSSPASIPYYNNCSGSNNSSVVCNDNVMDDY-QLQDHLSFLNDAS 179
Query: 150 ----------ELASSTDADHHNHHHLLKRSLSLPVHPNVCFGSDDDPNSGLGWKHCLYFA 199
ELA S H +RS S + C+GSDD SG GWK CLYFA
Sbjct: 180 KPEDLFDPRLELAMSPSFGETQLH---RRSYSFN---DACYGSDDGA-SGFGWKPCLYFA 232
Query: 200 KGFCKNGTACKFHHIHSPEAA-----TAAAIVGSPSKLSEFELSQELLLRSKASVQQRKL 254
+GFCKNG CKF H ++ +AAIVGSP KL FE QE+L RS QQ++L
Sbjct: 233 RGFCKNGNTCKFLHGGFADSVEASSAASAAIVGSPGKLDGFE--QEML-RS----QQQRL 285
Query: 255 AAASQFMGS--FPYNKCMNFL---NDTQRSAA--LMMGDELHNKFGTCSRPERNDF---- 303
A ASQ M FPYNKCMNF N+TQRSAA LMMG+ELH KFG C RPERNDF
Sbjct: 286 AVASQLMAGLNFPYNKCMNFFMQQNETQRSAAAALMMGEELH-KFGRC-RPERNDFSGMG 343
Query: 304 -FGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPET 362
G++NP +RQIYLTFPADSTFREEDVSNYFSI+GPV DVRIPYQQKRMFGFVTFVYPET
Sbjct: 344 LGGAVNPGSRQIYLTFPADSTFREEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPET 403
Query: 363 VKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKK--------QQQHQQQMERGEYSSACSS 414
VKLILAKGNPHFVCDSRVLVKPYKEKGKV EKK QQQ QQQ+ERGEYS+ CSS
Sbjct: 404 VKLILAKGNPHFVCDSRVLVKPYKEKGKVPEKKQQHQQQQQQQQQQQQLERGEYST-CSS 462
Query: 415 PSG-----PFDFHFGGRMLYNNQEM-LRRKLEEQADLQQAIEMQGRRLMNLQ-LHLK-NN 466
PSG P+D H G RM YN QEM LRRKLEEQADLQQAIE+QGRRLMNLQ L LK +
Sbjct: 463 PSGIDPREPYDLHLGARMFYNTQEMLLRRKLEEQADLQQAIELQGRRLMNLQLLDLKNHQ 522
Query: 467 HLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPE--ESGVSPVTDSQITD 524
H + H LS G+P+ SP S NN++ P +G+++EV E S + + + D
Sbjct: 523 HQHQHHLHNLSGGAPVASPXQSSIHNNQSLGLPSDGNNQEVXEENSSSPAATTSPTAAAD 582
Query: 525 HLFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSAGGHIT 584
+E N + N N N+S N EE N + DL +SLEHILPD+LFASP KSAG +
Sbjct: 583 KPLRQEVNISCNSNSGNDSGNNSTEESSNPADFDLHESLEHILPDSLFASPTKSAGDR-S 641
Query: 585 VFSSASAEVDEKNTSSVT-STNNNTKLPSTSLNMSSLNSCLLQMSRFSSGQGTIGM 639
VFS+ASA VDE T S+T ++NNN LP T+LNM+SL SC +M RF SG G I M
Sbjct: 642 VFSTASASVDESTTISITPASNNNPVLPGTTLNMASLKSCFFEMPRFPSGHGAIEM 697
>gi|297734950|emb|CBI17184.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 378/674 (56%), Positives = 446/674 (66%), Gaps = 94/674 (13%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGY-LLIQDNGDKEMIRLAFGPETLLHNLIFKAKT 59
MDSYEAT++VFSRI+A+DPENASKIMGY LLIQD+G+KEMIRLAFGPETLLHNLI KAKT
Sbjct: 1 MDSYEATRIVFSRIQALDPENASKIMGYILLIQDHGEKEMIRLAFGPETLLHNLILKAKT 60
Query: 60 HLSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSN 119
L S + ++ T+PS +P S P P + NG + SS+ + S+ ++
Sbjct: 61 QLGILS-NTPSTPTSPSPFNPISKPTRLPTN-------NGFNPSSSWPVSGFSDLRSPNS 112
Query: 120 ISNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNVC 179
+ SYA+ L +RS S + C
Sbjct: 113 TTAQLSYAA------------------------------------LHRRSYSFN---DAC 133
Query: 180 FGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAA-----TAAAIVGSPSKLSE 234
+GSDD SG GWK CLYFA+GFCKNG CKF H ++ +AAIVGSP KL
Sbjct: 134 YGSDDGA-SGFGWKPCLYFARGFCKNGNTCKFLHGGFADSVEASSAASAAIVGSPGKLDG 192
Query: 235 FELSQELLLRSKASVQQRKLAAASQFMGS--FPYNKCMNFL---NDTQRSAA--LMMGDE 287
FE QE+L RS QQ++LA ASQ M FPYNKCMNF N+TQRSAA LMMG+E
Sbjct: 193 FE--QEML-RS----QQQRLAVASQLMAGLNFPYNKCMNFFMQQNETQRSAAAALMMGEE 245
Query: 288 LHNKFGTCSRPERNDF-----FGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDV 342
LH KFG C RPERNDF G++NP +RQIYLTFPADSTFREEDVSNYFSI+GPV DV
Sbjct: 246 LH-KFGRC-RPERNDFSGMGLGGAVNPGSRQIYLTFPADSTFREEDVSNYFSIFGPVQDV 303
Query: 343 RIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKK------Q 396
RIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKV EKK Q
Sbjct: 304 RIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPEKKQQHQQQQ 363
Query: 397 QQHQQQMERGEYSSACSSPSG-----PFDFHFGGRMLYNNQEM-LRRKLEEQADLQQAIE 450
QQ QQQ+ERGEYS+ CSSPSG P+D H G RM YN QEM LRRKLEEQADLQQAIE
Sbjct: 364 QQQQQQLERGEYST-CSSPSGIDPREPYDLHLGARMFYNTQEMLLRRKLEEQADLQQAIE 422
Query: 451 MQGRRLMNLQ-LHLK-NNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVP 508
+QGRRLMNLQ L LK + H + H LS G+P+ SP+ S NN++ P +G+++EVP
Sbjct: 423 LQGRRLMNLQLLDLKNHQHQHQHHLHNLSGGAPVASPSQSSIHNNQSLGLPSDGNNQEVP 482
Query: 509 PE--ESGVSPVTDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHI 566
E S + + + D +E N + N N N+S N EE N + DL +SLEHI
Sbjct: 483 EENSSSPAATTSPTAAADKPLRQEVNISCNSNSGNDSGNNSTEESSNPADFDLHESLEHI 542
Query: 567 LPDNLFASPKKSAGGHITVFSSASAEVDEKNTSSVT-STNNNTKLPSTSLNMSSLNSCLL 625
LPD+LFASP KSAG +VFS+ASA VDE T S+T ++NNN LP T+LNM+SL SC
Sbjct: 543 LPDSLFASPTKSAGDR-SVFSTASASVDESTTISITPASNNNPVLPGTTLNMASLKSCFF 601
Query: 626 QMSRFSSGQGTIGM 639
+M RF SG G I M
Sbjct: 602 EMPRFPSGHGAIEM 615
>gi|356542909|ref|XP_003539907.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Glycine max]
Length = 704
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 354/728 (48%), Positives = 446/728 (61%), Gaps = 123/728 (16%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD YEAT++VFSRI+ +DPENASKIMG LL+QD+G+KEMIRLAFGPE L+H++I KA+
Sbjct: 1 MDGYEATRIVFSRIQNLDPENASKIMGVLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LS----------------------NASASASASATN-PSSLS---PSSAPWL-----PPA 89
L N + S+ S TN P +L+ PSS P + P
Sbjct: 61 LGLPSNSPPTPSTPPSPSPFISRQNLNTSSRLSGTNIPPALTIPNPSSWPTMSELQTPDD 120
Query: 90 SLSYANVVNGSSCSSTNAAASASESLYYSNISNNNSYASSDIADDFHQFQDHLSFLDESS 149
+S ++V GSS SS + +Y+N SD D+F Q QD L+FL++ S
Sbjct: 121 LMSPNHLVVGSSTSSLSLP-------FYAN-------GGSDPIDEF-QLQDQLAFLNDGS 165
Query: 150 ELASSTDADHHNHHHL-------LKRSLSLPVHPNV--------------------CFGS 182
+ST H N+ + L S + P + C G+
Sbjct: 166 --PTSTALSHKNNPDMFYPSNSDLSSSPTTAADPTLFPSYGWGGSLHRRSCSVNDACLGT 223
Query: 183 DDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELL 242
+D PNSGLGWK CLYFA+G+CKNGT+C+F +H AA+VGSPSK+ E ELL
Sbjct: 224 ED-PNSGLGWKPCLYFARGYCKNGTSCRF--LHGGLGDADAAMVGSPSKIEMMEQCHELL 280
Query: 243 LRSKASVQQRKLAAASQFMGS--FPYN-KCMNFL-----NDTQRSAA--LMMGDELHNKF 292
RSK+ QQR LAAASQ M S FPY+ KCMNFL NDTQR+AA LMM ++LH KF
Sbjct: 281 -RSKSGQQQR-LAAASQLMASSTFPYSPKCMNFLLQQQQNDTQRAAAAALMMSEDLH-KF 337
Query: 293 GTCSRPERNDFF----GSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQ 348
G SR ERNDF G +NP++RQIYLTFPADSTFREEDVSNYFSIYGPV DVRIPYQQ
Sbjct: 338 GR-SRLERNDFSLNSPGMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQ 396
Query: 349 KRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEY 408
KRMFGFVTFVYPETVKLIL+KGNPHFVCD+RVLVKPYKEKGKV +K ++ QQQ++RG++
Sbjct: 397 KRMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKYRKLQQQQVDRGDF 456
Query: 409 SSACSSPSG-----PFDFHFGGRMLYNNQEML-RRKLEEQADLQQAIEMQGRRLMNLQ-L 461
S C +P+G FD GGRM YN Q+ML RRKLEEQADLQQA+E+Q RRLM LQ L
Sbjct: 457 -SPCGTPTGLDARDQFDLQLGGRMFYNTQDMLWRRKLEEQADLQQALELQSRRLMGLQLL 515
Query: 462 HLKNNHLNHQFHHGLSNGSPIPSPTLSHSPN--NRTRIFPFEGSDEEVPPEESGVSPVTD 519
+K +H LS GSPIPSPT HSPN N+ + F + E P+ESG S
Sbjct: 516 DIKKHH-----QRALSAGSPIPSPT--HSPNMFNQNLVPSFHITSEA--PKESGSSSAPA 566
Query: 520 SQITDHLFHREEN----RTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASP 575
S + + ++ N + + N N D + ++ + ++ DL + LEH LPD+ FASP
Sbjct: 567 SIASVSVGQQQVNISVGKEVDVNGENGYDEGNGKQSSSHEDRDLQECLEHNLPDSPFASP 626
Query: 576 KKSAGGHITVFSSASAE---VDEKNTSSVTSTNNNTKLPSTS-LNMSSLNSCLLQMSRFS 631
K+ G + FS+ S E D S+ + +T LP+ S L+M + S Q+ RFS
Sbjct: 627 TKADGDFMVAFSNGSNEAIDADGLAASANSKFGTSTLLPAASALDMGTFKSFNCQIPRFS 686
Query: 632 SGQGTIGM 639
SG GTIGM
Sbjct: 687 SGHGTIGM 694
>gi|356529848|ref|XP_003533499.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Glycine max]
Length = 696
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 352/712 (49%), Positives = 448/712 (62%), Gaps = 99/712 (13%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MDSYEAT++VFSRI+ +DPENASKIMG LL+QD+G+KE+IRLAFGPE L+H++I KA+
Sbjct: 1 MDSYEATRVVFSRIQNLDPENASKIMGLLLLQDHGEKELIRLAFGPEALVHSVILKARKE 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPP-----ASLSYANVVNGSSCSSTNAAASASESL 115
L S S ++T PS +P+L + LS + N S+ T + + L
Sbjct: 61 LGLPSNSPHTTST-----LPSPSPYLSKQNSTSSRLSALTIPNPSASWPTMSELQTPDDL 115
Query: 116 YYSNISNNNS---YA--SSDIADDFHQFQDHLSFLDESSELASS-----TDADHHNHHHL 165
++++++S YA SD D+F Q QD L+FL++ S ++S D + N++
Sbjct: 116 VAGSLTSSSSLPYYANGGSDPVDEF-QLQDQLAFLNDGSNTSTSHKNNNPDLFYPNNNSD 174
Query: 166 LKRSLSLPVHPNV--------------------CFGSDDDPNSGLGWKHCLYFAKGFCKN 205
L S + P + C GS+D PNSGLGWK CLYFA+G+CKN
Sbjct: 175 LSSSPTTAADPTLFPSDGWGGSLHRRSCSVSDACLGSED-PNSGLGWKPCLYFARGYCKN 233
Query: 206 GTACKFHH---IHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQRKLAAASQFMG 262
GT+C+F H + AAA+VGSPSK+ E ELL RSK S QQ++LAAASQ M
Sbjct: 234 GTSCRFLHGGLGDADVGGAAAAMVGSPSKIEMMEQCHELL-RSK-SFQQQRLAAASQLMA 291
Query: 263 S--FPYN-KCMNFL-----NDTQRSAA--LMMGDELHNKFGTCSRPERNDFFGS----MN 308
S FPY+ K MNFL NDTQR+AA LMM ++LH KFG SR ERNDF + +N
Sbjct: 292 SSIFPYSPKSMNFLLQQQQNDTQRAAAAALMMSEDLH-KFGR-SRLERNDFSLNSPVMVN 349
Query: 309 PSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILA 368
P++RQIYLTFPADSTFREEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVKLIL+
Sbjct: 350 PASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILS 409
Query: 369 KGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSG-----PFDFHF 423
KGNPHFVCD+RVLVKPYKEKGKV +KKQ QQQ++RG++ S C +P+G FD
Sbjct: 410 KGNPHFVCDARVLVKPYKEKGKVPDKKQ---QQQVDRGDF-SPCGTPTGLDARDQFDLQL 465
Query: 424 GGRMLYNNQEML-RRKLEEQADLQQAIEMQGRRLMNLQLHLKNNHLNHQFHH--GLSNGS 480
GGRMLYN Q+ML RRKLEEQADLQQA+E+Q RRLM LQL L+ + HH LS GS
Sbjct: 466 GGRMLYNTQDMLWRRKLEEQADLQQALELQSRRLMGLQL------LDIKKHHQRALSTGS 519
Query: 481 PIPSPTLSHSPN--NRTRIFPFEGSDEEVPPEESGVSPVTDSQITDHLFHREENRTSN-- 536
PIPSPT HSPN N+ + F + E P+ESG + S + + N +
Sbjct: 520 PIPSPT--HSPNMFNQNIVPSFHINSES--PKESGSTSAPASTASVSAGQQPVNISVGKE 575
Query: 537 ---HNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSA--GGHITVFSSA-- 589
+ +N +GN K+ + D+ DL + LEH LPD+ FASP K+A G + FS+
Sbjct: 576 VVVNGENGYKEGNGKQSS-SHDDCDLQECLEHNLPDSPFASPTKAAVPGDFMAPFSNGPN 634
Query: 590 -SAEVDEKNTSSVTSTNNNTKLPSTS-LNMSSLNSCLLQMSRFSSGQGTIGM 639
+ + D S +T LP+ S L+M + S Q+ RFSSG GTIGM
Sbjct: 635 VAIDTDASAASVNFKFGTSTLLPAASPLDMGTFKSYNCQIPRFSSGHGTIGM 686
>gi|356542895|ref|XP_003539900.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Glycine max]
Length = 698
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 354/730 (48%), Positives = 435/730 (59%), Gaps = 133/730 (18%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MDSYEAT++VFSRI+ +D ENASKIMG LL+QD+G+KEMIRLAFGPE L+H++I KA+
Sbjct: 1 MDSYEATRIVFSRIQNLDAENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKD 60
Query: 61 L------------------------SNASASASASATN---PSSLSPSSAPWLPPASLSY 93
L SN S+ S S N P ++ SA W P S
Sbjct: 61 LGLPSNSPPTPSTPPSPSPFISRQNSNTSSRLSVSGINLPPPLTIPNPSASW-PTMSELQ 119
Query: 94 ANVVNGSSCSSTNAAASASESLYYSNISNNNSYASSDIADDFHQFQDHLSFLDESSELAS 153
++V GSS S S +Y+N SD D+F Q QD LSFL++ S
Sbjct: 120 TDLVAGSS-------TSLSSLPFYAN-------GGSDPIDEF-QLQDQLSFLND----GS 160
Query: 154 STDADHHNHHHLL------------------------------KRSLSLPVHPNVCFGSD 183
+T H N+ L +RS S+ + C G++
Sbjct: 161 NTSISHKNNPDLFYPTYSDFSSSPTTAADPTLFPSYGWGGSLHRRSCSVN---DACLGTE 217
Query: 184 DDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLL 243
D PNSGLGWK CLYFA+G+CKNGT+C+F +H AA+VGSPSK+ E ELL
Sbjct: 218 D-PNSGLGWKPCLYFARGYCKNGTSCRF--LHGGLGDADAAMVGSPSKIEMMEQCHELL- 273
Query: 244 RSKASVQQRKLAAASQFMGS--FPYN-KCMNFL-----NDTQRSAA--LMMGDELHNKFG 293
RSK S QQ++LAAASQ M S FPY+ KCMNFL NDTQR+AA LMM ++LH KFG
Sbjct: 274 RSK-SAQQQRLAAASQLMSSSTFPYSPKCMNFLLQQQQNDTQRAAAAALMMSEDLH-KFG 331
Query: 294 TCSRPERNDFF----GSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQK 349
SR ERNDF G +NP++RQIYLTFPADSTFREEDVSNYFSIYGPV DVRIPYQQK
Sbjct: 332 R-SRLERNDFSLNSPGMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQK 390
Query: 350 RMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYS 409
RMFGFVTFVYPETVKLIL+KGNPHFVCD+RVLVKPYKEKGKV +KK Q QQQ++RG++
Sbjct: 391 RMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKKLQ--QQQVDRGDF- 447
Query: 410 SACSSPSG------PFDFHFGGRMLYNNQEML-RRKLEEQADLQQAIEMQGRRLMNLQ-L 461
S C +P+G FD G RM YN Q+ML RRKLEEQADLQQA+E+Q RRLM LQ L
Sbjct: 448 SPCGTPTGLDARDHQFDLQLGSRMFYNTQDMLWRRKLEEQADLQQALELQSRRLMGLQLL 507
Query: 462 HLKNNHLNHQFHHGLSNGSPIPSPTLSHSPN--NRTRIFPFEGSDEEVPPEESGVSPVTD 519
+K +H L GSPIPSPT HSPN N+ + F + E P+ESG +
Sbjct: 508 DIKKHH-----QRALCTGSPIPSPT--HSPNMFNQNLVPSFHITSEA--PKESGSTSAPA 558
Query: 520 SQITDHLFHREEN-RTSNHNKNNNSDGNDKEEKPNSDENDLCD---SLEHILPDNLFASP 575
+ + N N DG D+ S +D CD LEH LPD+ FASP
Sbjct: 559 GTASVSTGQQSVNISVGKEVMVNGEDGYDEGNGRQSSSHDDCDLQECLEHNLPDSPFASP 618
Query: 576 KKSA--GGHITVFSSASAEVDEKNTSSVTSTN---NNTKLPSTS-LNMSSLNSCLLQMSR 629
K+ GG + FS+ E + + S+ ++ + T LP+ S L+M + S Q+ R
Sbjct: 619 TKATGPGGFMAPFSNGPNEAIDADASAASANSKFGTGTLLPAASALDMGTFKSFNCQIPR 678
Query: 630 FSSGQGTIGM 639
FSSG GTIGM
Sbjct: 679 FSSGHGTIGM 688
>gi|356531625|ref|XP_003534377.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Glycine max]
Length = 700
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 354/725 (48%), Positives = 449/725 (61%), Gaps = 121/725 (16%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD YEAT++VFSRI+ +DPENASKIMG LL+QD+G+KEMIRLAFGPE L+H++I KA+
Sbjct: 1 MDGYEATRIVFSRIQNLDPENASKIMGVLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LS----------------------NASASASASATNPSSLS---PSSAPWLPPASLSYAN 95
L N+++S + P +L+ PSS P + +S +
Sbjct: 61 LGLPSNSPPTPSTPPSPSPFLSRQNSTSSRLSGINIPPALTIPNPSSWPTMSDDLMSPNH 120
Query: 96 VVNGSSCSSTNAAASASESLYYSNISNNNSYASSDIADDFHQFQDHLSFLDE----SSEL 151
+V GSS SS++ YY+N SD DDF Q QD LSFL++ S+
Sbjct: 121 LVVGSSTSSSSLP-------YYAN-------GGSDPIDDF-QLQDQLSFLNDGSPTSTAF 165
Query: 152 ASSTDAD--HHNHHHLLKRSLSLPVHPNV--------------------CFGSDDDPNSG 189
A T+ D + ++ L S + V P + C GS+D P+SG
Sbjct: 166 AHKTNPDLFYPTNNSDLSSSPTTAVDPTLFPSYGWGGSIHRRSCSVNDACLGSED-PSSG 224
Query: 190 LGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAA--IVGSPSKLSEFELSQELLLRSKA 247
LGWK CLYFA+G+CKNGT+C+F H +A A +VGSP K+ E ELL RSK
Sbjct: 225 LGWKPCLYFARGYCKNGTSCRFLHGGIGDADGGGAAAMVGSPGKIEMMEQCHELL-RSK- 282
Query: 248 SVQQRKLAAASQFMGS--FPYN-KCMNFL-----NDTQRSAA--LMMGDELHNKFGTCSR 297
SVQQ++LAAASQ M S FPY+ K MNFL NDTQR+AA LMM ++LH KFG SR
Sbjct: 283 SVQQQRLAAASQLMASSTFPYSPKSMNFLLQQQQNDTQRAAAAALMMSEDLH-KFGR-SR 340
Query: 298 PERNDFFGS----MNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFG 353
ERNDF + +NP++RQIYLTFPADSTFREEDVSNYFSIYGPV DVRIPYQQKRMFG
Sbjct: 341 LERNDFSLNSPVMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFG 400
Query: 354 FVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACS 413
FVTFVYPETVKLIL+KGNPHFVCD+RVLVKPYKEKGKV +KKQ QQQ++RG++ S C
Sbjct: 401 FVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKKQ---QQQVDRGDF-SPCG 456
Query: 414 SPSG-----PFDFHFGGRMLYNNQEML-RRKLEEQADLQQAIEMQGRRLMNLQLHLKNNH 467
+P+G FD GGRMLYN Q+ML RRKLEEQADLQQA+E+Q RRLM LQL
Sbjct: 457 TPTGLDARDQFDLQLGGRMLYNTQDMLWRRKLEEQADLQQALELQSRRLMGLQL------ 510
Query: 468 LNHQFHH--GLSNGSPIPSPTLSHSPN--NRTRIFPFEGSDEEVPPEESGVSPVTDSQIT 523
L+ + HH LS GSPIPSPT HSPN N+ + F + E P+ESG + S +
Sbjct: 511 LDIKKHHQRALSTGSPIPSPT--HSPNMFNQNIVPSFHINSES--PKESGSTSAPASTAS 566
Query: 524 DHLFHREENRTSN-----HNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKS 578
+ N + + +N +GN K+ + D+ DL + LEH LPD+ FASP K
Sbjct: 567 VSAGQQPVNISVGKEVVVNGENGYKEGNGKQSS-SHDDCDLQECLEHNLPDSPFASPTKG 625
Query: 579 AGGHITVFSSASAEVDEKNTSSVTST---NNNTKLPSTS-LNMSSLNSCLLQMSRFSSGQ 634
G + FS+ E ++ + S+ ++ +T LP+ S L+M + S Q+ RFSSG
Sbjct: 626 DGDFLVAFSNGPNEANDADASAASANSKFGTSTLLPAASALDMGTFKSFNCQIPRFSSGH 685
Query: 635 GTIGM 639
GTIGM
Sbjct: 686 GTIGM 690
>gi|224072821|ref|XP_002303898.1| predicted protein [Populus trichocarpa]
gi|222841330|gb|EEE78877.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 326/692 (47%), Positives = 422/692 (60%), Gaps = 103/692 (14%)
Query: 26 MGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTHLSNASAS---------------ASA 70
MG LLIQD+G+KEMIRLAFGPE L+H++I KA+ L +S +
Sbjct: 1 MGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKELGLSSPTNLSTSPSSPSPLYSSNPI 60
Query: 71 SATNPSSLSPSSAPWLPPASLSYANVVNGSS-------------CSSTNAAASASESLYY 117
+ + +S S S + P SL+ N + +S S +++ + + +Y
Sbjct: 61 AISRQNSSSTSRLGFNIPPSLAIPNPSSNNSSSWSDLPNPDDLMISPNDSSLNPASVPFY 120
Query: 118 SNISNNNSYASSDIADDFHQFQDHLSFLDESSE----------------LASSTDADHHN 161
+N SD+ D+F Q QD LSFL+++S+ L+S T A +
Sbjct: 121 ANGVRG---GESDLMDEF-QLQDQLSFLNDNSQNLGPKSSDLFYPQLDALSSPTGA---S 173
Query: 162 HHHLLKRSLSLPVHPNVCFGSD----DDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSP 217
+ VH C SD +DPNSG GW+ CLYFA+G+CKNG+ C+F H
Sbjct: 174 DSMMFPSYWGGSVHRRSCSVSDVLGSEDPNSGFGWRPCLYFARGYCKNGSNCRFVHGGLG 233
Query: 218 EAATAAAIVGSPSKLSEFELSQEL--LLRSKASVQQRKLAAASQFM----GSFPYN-KCM 270
E A +VGSP+ ++ ++ + LLRSK++ QQR LAAASQ M SFPY+ K M
Sbjct: 234 EL-DGAGVVGSPNSNNKIDMMDQCHELLRSKSAHQQR-LAAASQLMSSSAASFPYSPKSM 291
Query: 271 NFL-----NDTQRSAA--LMMGDELHNKFGTCSRPERNDFFGSMNPSARQIYLTFPADST 323
NFL ND+QR+AA LMMG+++H KFG SR +RND +NP++RQIYLTFPADST
Sbjct: 292 NFLLQQQQNDSQRAAATALMMGEDMH-KFGR-SRLDRNDL---VNPASRQIYLTFPADST 346
Query: 324 FREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVK 383
FREEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHFVCD+RVLVK
Sbjct: 347 FREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVK 406
Query: 384 PYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSG-----PFDFHFGGRMLYNNQEML-RR 437
PYKEKGKV +KKQQ QQQ+ERGE+ S C +P+G PFD G RM YN Q+ML RR
Sbjct: 407 PYKEKGKVPDKKQQ--QQQVERGEF-SPCGTPTGLDSRDPFDLQLGARMFYNTQDMLWRR 463
Query: 438 KLEEQADLQQAIEMQGRRLMNLQ-LHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPN--NR 494
KLEEQADLQQA+E+Q RRLM+LQ L +K +H H LSNGSP+PSPT HSPN N
Sbjct: 464 KLEEQADLQQALELQSRRLMSLQLLDVKKHH-----HRALSNGSPVPSPT--HSPNIFNH 516
Query: 495 TRIFPFEGSDEEVPPEESGVSPVTDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPNS 554
+ FP S EV P+E+ S + + +T + N TS ++ + +E +
Sbjct: 517 SLAFPPLHSSTEV-PQENCSSSMPATSVTAPPEKQISNATSGKEYTSSEENGSGKESSHG 575
Query: 555 DENDLCDSLEHILPDNLFASPKKSAGGHITVFSSASAEVDEKNTSSVTSTNNNTKL---- 610
+++DL +SLEH LPD+ FASP K G + + F + E EK+ S TST+ N L
Sbjct: 576 EDSDLQESLEHNLPDSPFASPTKGTGDYYSAFINGLTEAREKDASIPTSTSANNNLVPSS 635
Query: 611 ---PSTSLNMSSLNSCLLQMSRFSSGQGTIGM 639
P++SL M+S S Q+ RFSSG G IGM
Sbjct: 636 LISPNSSLEMASFKSFNCQIPRFSSGHGAIGM 667
>gi|449451727|ref|XP_004143613.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Cucumis sativus]
Length = 733
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 346/735 (47%), Positives = 436/735 (59%), Gaps = 111/735 (15%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MDSYEA+++VFSRI+ +DPENASKIMG LLIQD+G+KEMIRLAFGPE LLH++I KAK
Sbjct: 1 MDSYEASRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALLHSVILKAKKD 60
Query: 61 LSNASASAS-------------ASATNPSSLSPSSAPWLP-----PASLSYANVVNGSSC 102
LS + ++ A +TNP S+S S+ P SL+ + + SS
Sbjct: 61 LSLPAVNSPSTPSTPSSSPSPFALSTNPISISRQSSSSSRLGISLPLSLT---IPSPSSS 117
Query: 103 SSTNAAASASESLYYSN---ISNNN-----------SYASSDIADDFHQFQDHLSFLDES 148
SS + AA S L S+ IS N +SD+ D+F Q QD LSFL++
Sbjct: 118 SSVSWAAGFSSDLQTSDDHLISPGNLPLGSSCFAAGGAPASDMIDEF-QLQDQLSFLNDG 176
Query: 149 SELASSTDADHHNHHHLLKRSLSL---------------PVHPNVCFGSD-----DDPNS 188
S +AD L S + PVH C +D +D N
Sbjct: 177 SPTIGVKNADLFFPPADLSSSPTGGGFGSYGGDATWGGGPVHRRSCSVNDACLGTEDLNC 236
Query: 189 GLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKAS 248
GLGWK CLYFA+GFCKNGT+C+F H ++ +AA VGSPSK+ E ELL RSK+S
Sbjct: 237 GLGWKPCLYFARGFCKNGTSCRFLHGGLGDSDVSAAAVGSPSKIDVMEQCHELL-RSKSS 295
Query: 249 VQQRKLAAASQFMGS---FPYN-KCMNFL-----NDTQRSAA--------LMMGDELHNK 291
QQR LAAASQ M S FPY+ K +NFL ND+QR+AA LMMG++LH K
Sbjct: 296 AQQR-LAAASQLMASANSFPYSPKSINFLLQQQQNDSQRAAAAAAAAAAALMMGEDLH-K 353
Query: 292 FGTCSRPERNDF-----FGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPY 346
F SR ERN+F G +NP++RQIYLTFPADSTF+EEDVSNYFS+YGPV DVRIPY
Sbjct: 354 FSRSSRLERNEFSLNGSAGIINPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPY 413
Query: 347 QQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERG 406
QQKRMFGFVTFVYPETVKLILAKGNPHFVCD+RVLVKPYKEKGKV +K ++ QQQ++R
Sbjct: 414 QQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKYRK--QQQIDRD 471
Query: 407 EYSSACSSPSG-----PFD-FHFGGRMLYNNQE--MLRRKLEEQADLQQAIEMQGRRLMN 458
S C +P+G +D G RM YN+ + + RRKLEEQ Q +++Q RRL+N
Sbjct: 472 --FSPCGTPTGLDSRELYDHLQLGSRMFYNSHQDLLWRRKLEEQQADLQTLDLQSRRLLN 529
Query: 459 LQ-LHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPN---NRTRIFP---FEGSDEEVPP-E 510
LQ L +K N L H H LS GSPIPSPT HSPN + IFP GS+
Sbjct: 530 LQLLDVKKNQLPHHHHRALSTGSPIPSPT--HSPNPLFAQNLIFPSIRSSGSNSTSDILR 587
Query: 511 ESGVSPV-TDSQITDHLFHREENRTSNHNKNNNS-----DGNDKEEKPNSDENDLCDSLE 564
E+G +PV T ++ + R + N S +GNDK E+ D++DL + E
Sbjct: 588 ENGATPVRTPPPVSVMASSTDMPRQPSPVDNGASATIGLNGNDK-ERSQIDDSDLLECFE 646
Query: 565 HILPDNLFASPKKSAGGHITVFSSASAEVDEKNTSSVTSTNNNTKLPSTSLNMSSLNSCL 624
H LPD+ FASP K+ G + T FS +A V E T S ++++ S+ +S S
Sbjct: 647 HNLPDSPFASPAKATGDYTTNFSDIAA-VGEAATDSDDASSSILTSTSSLEVATSFKSFN 705
Query: 625 LQMSRFSSGQGTIGM 639
Q+ RF SG IGM
Sbjct: 706 CQIPRFPSGHSPIGM 720
>gi|296085121|emb|CBI28616.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 287/494 (58%), Positives = 342/494 (69%), Gaps = 47/494 (9%)
Query: 177 NVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHH---IHSPEAATAAAIVGSPSKLS 233
++C SDD P SG GWK CLYFA+G+CKNGT+C+F H S + AA+VGSPSK+
Sbjct: 136 DICLASDD-PASGFGWKPCLYFARGYCKNGTSCRFLHGGDSASVVGSEGAAMVGSPSKIE 194
Query: 234 EFELSQELLLRSKASVQQRKLAAASQFMGS--FPYN-KCMNFL-----NDTQRSAA-LMM 284
E ELL RSK S QQ++LAAASQ M S FPY+ KCMNFL D+QR+AA LMM
Sbjct: 195 MMEQCHELL-RSK-SAQQQRLAAASQIMASASFPYSAKCMNFLLQQQQTDSQRAAAALMM 252
Query: 285 GDELHNKFGTCSRPERNDFF----GSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVH 340
GD++H KFG SR ER +F G +NP +RQIYLTFPADSTFREEDVSNYFSI+GPV
Sbjct: 253 GDDMH-KFGR-SRLERGEFMNGGAGMVNPGSRQIYLTFPADSTFREEDVSNYFSIFGPVQ 310
Query: 341 DVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQ 400
DVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCD+RVLVKPYKEKGKV +KKQQQ Q
Sbjct: 311 DVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQQQ 370
Query: 401 QQMERGEYSSACSSPSG-----PFDFHFGGRMLYNNQEML-RRKLEEQADLQQAIEMQGR 454
QQ+ERGE+ SACS+P+G P+D G RM YN Q+ML RRKLEEQADLQQAIE+QGR
Sbjct: 371 QQVERGEF-SACSTPTGLDSRDPYDLQLGARMFYNTQDMLWRRKLEEQADLQQAIELQGR 429
Query: 455 RLMNLQLHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGV 514
RLM LQL + Q H LS G+PIPSPT S S N+ I P + S E PEE+
Sbjct: 430 RLMGLQLL---DVKKQQHHRALSTGAPIPSPTHSPSFFNQPLILPSDRSSPEA-PEENCS 485
Query: 515 SPVTDSQITDHLFHREENRTSNHNK------NNNSDGNDKEEKPNSDENDLCDSLEHILP 568
SP T + +++ + + + N +G KE N D +DL +SLEH LP
Sbjct: 486 SPATAIPVNAVAAEQQQQTVTTAAEKEFTGIDENGNGTGKESSHNED-SDLPESLEHNLP 544
Query: 569 DNLFASPKKSAGGHITVFSSASAEVDEKNT--SSVTSTNNN----TKLPSTS-LNMSSLN 621
D+ FASP K AG +++ FS+AS+EV EKNT S + N N + LP+TS L+M+S
Sbjct: 545 DSPFASPTKGAGEYLSTFSNASSEV-EKNTTVSGSPAVNGNLITSSLLPATSTLDMASFK 603
Query: 622 SCLLQMSRFSSGQG 635
SC QM RFSSG G
Sbjct: 604 SCYFQMPRFSSGHG 617
>gi|449476117|ref|XP_004154645.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 46-like [Cucumis sativus]
Length = 675
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 326/683 (47%), Positives = 413/683 (60%), Gaps = 88/683 (12%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEAT LV+++IK ++PENASKIMG+LLIQD GDKE+IRLAFGPETLLH+LI KAK H
Sbjct: 1 MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
Query: 61 LS---------NASASASASATNPSSLSP--SSAPWLP---------PASLSYANVVNGS 100
L +S S PS+ +P S+P +P P+S S + S
Sbjct: 61 LGFPLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSTTGSWSLS 120
Query: 101 SCSSTNAAASASESLYYSNI-----------SNNNSYASSDIADDFHQFQDHLSFLDESS 149
++ + +S L Y +I + N + S++ ++ Q ++LSFL+ESS
Sbjct: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPFMQHKNGFVDSEVIEE-PQVNEYLSFLNESS 179
Query: 150 ELASSTDADHHNHHHLLKRSLS----------LPVH------PNVCFGSDDDPNSGLGWK 193
SS D + L R L P H +VCFGS+D G+G+K
Sbjct: 180 ---SSRGEDLVDPRMELGRGLQNWTQSMDNADTPFHRRSYSASDVCFGSEDG-GFGVGYK 235
Query: 194 HCLYFAKGFCKNGTACKF-HHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQR 252
CLYFA+GFCKNG+ CKF H S +AAIVGSPSKL +E +R KA+ QQR
Sbjct: 236 PCLYFARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFDQREEFMRYKAAQQQR 295
Query: 253 KLAAASQFM-GSFP--YNKCMNFL----NDTQRS--AALMMGDELHNKFGTCSRPERNDF 303
LA AS+ M G P YNK +NFL N+ R+ AALMMGDE H KFG SR ERNDF
Sbjct: 296 -LATASELMAGVSPSQYNKYINFLLQQQNENHRATAAALMMGDEYH-KFGM-SRSERNDF 352
Query: 304 FG----SMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVY 359
N ++RQIYLTFPADSTF++EDVS YFS +GPV DVRIPYQQKRMFGFVTFVY
Sbjct: 353 LALAAEKRNSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVY 412
Query: 360 PETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSG-- 417
PETVK ILAKGNPHF+C+SRVLVKPYKEKGKV EK+QQ QQQ++RG++ S C SPSG
Sbjct: 413 PETVKXILAKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLDRGDF-SPCLSPSGLD 471
Query: 418 ---PFDFHFGGRMLYNNQE--MLRRKLEEQADLQQAIEMQGRRLMNLQL-HLKNNHLNHQ 471
P+D + G RM+YNN + MLRRKLEEQ +LQQA+E+QGRRL+NLQL LKN+ L+H
Sbjct: 472 ARDPYDLNLGARMMYNNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHH 531
Query: 472 FHHGLSNGSPIPSPTLSHSPNNRTR-IFPFEGSDEEVPPEESGVSPVTDSQI-TDHLFHR 529
H L PI +P S N + IFP + + E T++ I T F
Sbjct: 532 HPHNL----PICAPLSIESHNQMNQNIFPPDFINPEASEGHENNQLATNNAISTQQNFQL 587
Query: 530 EENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSAGGHITVFSSA 589
EEN +NS G E+ NS+ ++ S+E +LPD+ FASPKKSA G + SS
Sbjct: 588 EENLCFIQ---SNSGGKATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDISSV 644
Query: 590 SAEVDEKNTSSVTSTNNNTKLPS 612
+ NT +S+ +N LP+
Sbjct: 645 KGDGCGPNTLP-SSSQSNPSLPT 666
>gi|449442555|ref|XP_004139047.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Cucumis sativus]
Length = 675
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 326/683 (47%), Positives = 413/683 (60%), Gaps = 88/683 (12%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEAT LV+++IK ++PENASKIMG+LLIQD GDKE+IRLAFGPETLLH+LI KAK H
Sbjct: 1 MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
Query: 61 LS---------NASASASASATNPSSLSP--SSAPWLP---------PASLSYANVVNGS 100
L +S S PS+ +P S+P +P P+S S + S
Sbjct: 61 LGFPLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSTTGSWSLS 120
Query: 101 SCSSTNAAASASESLYYSNI-----------SNNNSYASSDIADDFHQFQDHLSFLDESS 149
++ + +S L Y +I + N + S++ ++ Q ++LSFL+ESS
Sbjct: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPFMQHKNGFVDSEVIEE-PQVNEYLSFLNESS 179
Query: 150 ELASSTDADHHNHHHLLKRSLS----------LPVH------PNVCFGSDDDPNSGLGWK 193
SS D + L R L P H +VCFGS+D G+G+K
Sbjct: 180 ---SSRGEDLVDPRMELGRGLQNWTQSMDNADTPFHRRSYSASDVCFGSEDG-GFGVGYK 235
Query: 194 HCLYFAKGFCKNGTACKF-HHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQR 252
CLYFA+GFCKNG+ CKF H S +AAIVGSPSKL +E +R KA+ QQR
Sbjct: 236 PCLYFARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFDQREEFMRYKAAQQQR 295
Query: 253 KLAAASQFM-GSFP--YNKCMNFL----NDTQRS--AALMMGDELHNKFGTCSRPERNDF 303
LA AS+ M G P YNK +NFL N+ R+ AALMMGDE H KFG SR ERNDF
Sbjct: 296 -LATASELMAGVSPSQYNKYINFLLQQQNENHRATAAALMMGDEYH-KFGM-SRSERNDF 352
Query: 304 FG----SMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVY 359
N ++RQIYLTFPADSTF++EDVS YFS +GPV DVRIPYQQKRMFGFVTFVY
Sbjct: 353 LALAAEKRNSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVY 412
Query: 360 PETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSG-- 417
PETVK ILAKGNPHF+C+SRVLVKPYKEKGKV EK+QQ QQQ++RG++ S C SPSG
Sbjct: 413 PETVKNILAKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLDRGDF-SPCLSPSGLD 471
Query: 418 ---PFDFHFGGRMLYNNQE--MLRRKLEEQADLQQAIEMQGRRLMNLQL-HLKNNHLNHQ 471
P+D + G RM+YNN + MLRRKLEEQ +LQQA+E+QGRRL+NLQL LKN+ L+H
Sbjct: 472 ARDPYDLNLGARMMYNNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHH 531
Query: 472 FHHGLSNGSPIPSPTLSHSPNNRTR-IFPFEGSDEEVPPEESGVSPVTDSQI-TDHLFHR 529
H L PI +P S N + IFP + + E T++ I T F
Sbjct: 532 HPHNL----PICAPLSIESHNQMNQNIFPPDFINPEASEGHENNQLATNNAISTQQNFQL 587
Query: 530 EENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSAGGHITVFSSA 589
EEN +NS G E+ NS+ ++ S+E +LPD+ FASPKKSA G + SS
Sbjct: 588 EENLCFIQ---SNSGGKATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDISSV 644
Query: 590 SAEVDEKNTSSVTSTNNNTKLPS 612
+ NT +S+ +N LP+
Sbjct: 645 KGDGCGPNTLP-SSSQSNPSLPT 666
>gi|38230504|gb|AAR14273.1| predicted protein [Populus tremula x Populus alba]
Length = 705
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 295/614 (48%), Positives = 371/614 (60%), Gaps = 102/614 (16%)
Query: 74 NPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNISNNNSYASSDIAD 133
N SSL+P+S P SYAN V G SD+ D
Sbjct: 133 NDSSLNPASVP-------SYANGVRGG--------------------------GESDLMD 159
Query: 134 DFHQFQDHLSFL-------DESSEL--------ASSTDADHHNHHHLLKRSLSLPVHPNV 178
+FH QD LSFL +SS+L +S T A + + VH
Sbjct: 160 EFH-LQDQLSFLMIIHKSRSKSSDLFYPQLDALSSPTGA---SDSMMFPSYWGGSVHRRS 215
Query: 179 CFGSD----DDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSE 234
C SD +DPNSG GW+ CLYFA+G+CKNG+ C+F H E A +VGSP+ ++
Sbjct: 216 CSVSDVLGSEDPNSGFGWRPCLYFARGYCKNGSNCRFVHGGLGEL-DGAGVVGSPNSNNK 274
Query: 235 FELSQEL--LLRSKASVQQRKLAAASQFM----GSFPYN-KCMNFL-----NDTQRSAA- 281
++ + LLRSK++ QQR LAAASQ M SFPY+ K MNFL ND+QR+AA
Sbjct: 275 IDMMDQCHELLRSKSAHQQR-LAAASQLMSGSAASFPYSPKSMNFLLQQQQNDSQRAAAT 333
Query: 282 -LMMGDELHNKFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVH 340
LMMG+++H KFG SR +RND +NP++RQIYLTFPADSTFREEDVSNYFSIYGPV
Sbjct: 334 ALMMGEDMH-KFGR-SRLDRNDL---VNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQ 388
Query: 341 DVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQ 400
DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHFVCD+RVLVKPYKEKGKV +KKQQ Q
Sbjct: 389 DVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQ--Q 446
Query: 401 QQMERGEYSSACSSPSG-----PFDFHFGGRMLYNNQEML-RRKLEEQADLQQAIEMQGR 454
QQ+ERGE+ S C +P+G PFD G M YN Q+ML RRKLE QADLQQA+E+Q R
Sbjct: 447 QQVERGEF-SPCGTPTGLDSRDPFDLQLGAGMFYNTQDMLWRRKLEGQADLQQALELQSR 505
Query: 455 RLMNLQ-LHLKNNHLNHQFHHGLSNGSPIP-SPTLSHSPNNRTRIFPFEGSDEEVPPEES 512
RLM+LQ L +K +H H LSNGSP P + +LS N+ P S E P+E+
Sbjct: 506 RLMSLQLLDVKKHH-----HRALSNGSPCPLTYSLSQYFNHSLAFPPLHSSTEA--PQEN 558
Query: 513 GVSPVTDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLF 572
S + + +T L ++ N TS ++ + +E + +++DL +SLEH LPD+ F
Sbjct: 559 CSSSMPATSVTARLKNKISNATSGKEYTSSEENGSGKESSHGEDSDLQESLEHNLPDSPF 618
Query: 573 ASPKKSAGGHITVFSSASAEVDEKNTSSVTSTNNNTKL-------PSTSLNMSSLNSCLL 625
ASP K G + + F + E EK+ S TST+ N L P++SL M+S S
Sbjct: 619 ASPAKGTGDYYSAFINGLTEAHEKDASIPTSTSANNNLVPSSLISPNSSLEMASFKSFNC 678
Query: 626 QMSRFSSGQGTIGM 639
Q+ RFSSG G IGM
Sbjct: 679 QIPRFSSGHGAIGM 692
>gi|357471117|ref|XP_003605843.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355506898|gb|AES88040.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 666
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 315/694 (45%), Positives = 413/694 (59%), Gaps = 93/694 (13%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD YEATK+VFSRIK++DPENAS IMG LL +++G+KEMIRLA PE+L+H++IFKA+
Sbjct: 1 MDGYEATKMVFSRIKSMDPENASNIMGLLLSKEHGEKEMIRLALSPESLIHSVIFKARKE 60
Query: 61 LS---------------NASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSST 105
L + + S N S+ S S+ + P SL+ N S +T
Sbjct: 61 LGLPCSNNSPPTPSSTSPSPSPNFLSRQNSSTSSRLSSGFNLPPSLTIPN----PSWGAT 116
Query: 106 NAAASASESLYYSNISNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHL 165
S S+ ++ SD DDF Q QD LSFL++ S+ + + H
Sbjct: 117 TTTMSMSDQF--------QNHDDSDPIDDF-QLQDQLSFLNDGSDPSYGWGGNSSLH--- 164
Query: 166 LKRSLSLPVHPNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAI 225
+RS S+ + +DP++GLGWK CLYFA+G+CKNGT+C+F +H +A AAAI
Sbjct: 165 -RRSCSVN---DAYLAGSEDPSAGLGWKPCLYFARGYCKNGTSCRF--LHGDASAAAAAI 218
Query: 226 VGSPSKLSEF-ELSQELLLRSKASVQQR--KLAAASQFMGSFPY---NKCMNFLN----- 274
VGSP+K+ + LLRSK+S QQR AAASQ M S + K MNFL
Sbjct: 219 VGSPNKIENMMDQYHHELLRSKSSHQQRFAAAAAASQLMASNSFLCSPKGMNFLLQQQQN 278
Query: 275 --DTQRSAA--LMMGDELHNKFGTCSRPERNDF-----FGSMNPSARQIYLTFPADSTFR 325
DTQR+AA LMM +ELH KFG SR ERNDF G +NP++RQIYLTFPADSTFR
Sbjct: 279 QNDTQRAAAAALMMNEELH-KFGR-SRLERNDFSLYSPTGMINPASRQIYLTFPADSTFR 336
Query: 326 EEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPY 385
EEDVS YFS +GPV DVRIPYQQKRMFGFVTFV+PETVK IL+KGNPHFVC++RVLVKPY
Sbjct: 337 EEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVFPETVKDILSKGNPHFVCEARVLVKPY 396
Query: 386 KEKGKVQEKKQQQHQQQMERGEYSSACSSPSG------PFDFHFGGRMLYNNQEMLRRKL 439
KEKGK+ +KKQ Q Q G++ S C +P+G +D RM YN ++ML R+
Sbjct: 397 KEKGKIPDKKQLQQQ-----GDF-SPCRTPTGLVDARDQYDLQLAERMFYNTEDMLWRR- 449
Query: 440 EEQADL-QQAIEMQGRRLMNLQ-LHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRI 497
+EQA+L QQA+E+Q RRLM LQ L +KN H LS GS + SPT S + ++ +
Sbjct: 450 KEQAELQQQALEIQRRRLMGLQLLDIKNQH-----QRALSTGSLVHSPTQSPNMFDQNLV 504
Query: 498 FPFEGSDE--EVPPEESGV----SPVTDSQITDHLFHREENRTSNHNKNNNSDGNDKEEK 551
PF S E +V S + V+ Q + + +E + N N+ S+ N K
Sbjct: 505 LPFRRSSEFSDVIGSNSASAHSNASVSAGQQSVKGYAGKEVLVNGENGNSESNENGKTSS 564
Query: 552 PNSDENDL--CDSLEHILPDNLFASPKKSAGGHITVFSSASAEVDEKNTSSVTSTNNNTK 609
+ +E +L C LEH LPD+ FASP K+ G + FS+ E + + S+ + +
Sbjct: 565 SHEEELNLHECLELEHNLPDSPFASPTKAVGDLVGPFSNGPLETIDSDASTSSKFGTSKL 624
Query: 610 LP-STSLNMSSL---NSCLLQMSRFSSGQGTIGM 639
LP S SL+M S N+C Q+ RFSS GTIGM
Sbjct: 625 LPTSASLDMGSFKPYNNC--QLPRFSSAHGTIGM 656
>gi|255544930|ref|XP_002513526.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223547434|gb|EEF48929.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 686
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 298/713 (41%), Positives = 398/713 (55%), Gaps = 134/713 (18%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEAT ++ S+IK+IDPENASKIMGY+LIQD + +++ LAFG ETLLHN+I KAKTH
Sbjct: 1 MDTYEATNILMSKIKSIDPENASKIMGYILIQDLNENDLLSLAFGSETLLHNVIIKAKTH 60
Query: 61 LSNASAS-ASASATNPSSLSPSSAP--------------------------------WLP 87
L ++ + + S+ PS L+P S P W
Sbjct: 61 LGLSTNTLTTPSSPLPSPLNPISRPANNHSPFSTQSSSSPRVGTPFVDFAKSPSPHSW-- 118
Query: 88 PAS-------------------LSYANVVNGSSCSSTNAAASASESLYYSNISNNNSYAS 128
PAS LSY N+ +GS+ +A A+ N S + S S
Sbjct: 119 PASGLANNNNGITSISPKSSPFLSYDNIRSGSALVPPSATANGG------NGSGDVSRNS 172
Query: 129 SDIADDFHQFQDHLSFLDE-----------SSELASSTDADHHNHHHLLKRSLSLPVHPN 177
+D+ +++ Q ++ SFLD+ ++L + + NH H + S S +
Sbjct: 173 TDLLNEY-QLDEYFSFLDDLPSKGEDFGDPRAQLGGFSMNNVDNHIHRRRFSES-----D 226
Query: 178 VCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHH-----------IHSPEAATAAAIV 226
CFG++D G+G++ CLYFA+GFCKNG CKF H + +V
Sbjct: 227 ACFGTEDG-GFGIGYRPCLYFARGFCKNGENCKFVHGGFGAGENIGDVSGGGGGGGGLLV 285
Query: 227 GSPSKLSEFELSQ-ELLLRSKASVQQRKLAAASQFMGSFPYNKCMNFL----NDTQR--S 279
GSP ++ L Q E ++R KA+ QQ++LA YNK MNFL +D+QR
Sbjct: 286 GSPREMEGLYLQQQEDMMRMKAAQQQQRLA----------YNKYMNFLLQQESDSQRIGP 335
Query: 280 AALMMGDELHNKFGTCSRPERNDFFG-----SMNPSARQIYLTFPADSTFREEDVSNYFS 334
A++MMGDE H K G RPERNDF N ++RQIYLTFPADSTF++EDVSNYFS
Sbjct: 336 ASVMMGDEFH-KIGQF-RPERNDFLAMAMEEKANSASRQIYLTFPADSTFKDEDVSNYFS 393
Query: 335 IYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEK 394
+GPV DVRIPYQQKRMFGFVTFV+ +TVKLIL++GNPHF+CDSRVLVKPYKEKGKV K
Sbjct: 394 HFGPVQDVRIPYQQKRMFGFVTFVHSDTVKLILSRGNPHFICDSRVLVKPYKEKGKVTNK 453
Query: 395 K-QQQHQQQMERGEYSSACSSPSG-----PFDFHFGGRMLYNNQE-MLRRKLEEQADLQQ 447
+ QQ QQ M+RG + S CSSPSG +D H G RMLYN+QE MLRRKLE+QA+LQQ
Sbjct: 454 RQQQLQQQLMDRGNF-SPCSSPSGLDPRELYDLHLGARMLYNSQEMMLRRKLEQQAELQQ 512
Query: 448 AIEMQGRRLMNLQLHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEV 507
AIE+QGRRL+NLQL H LS G+PI +H+P + F + +++V
Sbjct: 513 AIELQGRRLINLQLPDLRGDYAHHHQRSLSAGAPIS----THAPVDHNLNFTSDIKNQDV 568
Query: 508 PPEESGVSPVTDSQ--ITDHLFHREENRT---SNHNKNNNSDGNDKEEKPNSDENDLCDS 562
++ SP T++ + + EEN SN N +G E D N C
Sbjct: 569 LEDKGDSSPTTNASTVVAEQNLQHEENAASFQSNDGVNGKVEGISLE---GCDANKHCGR 625
Query: 563 -LEHILPDNLFASPKKSAGGHITVFSSASAEVDEKNTSSVTSTNNNTKLPSTS 614
+EH LPD+ FASP KS G ++ + SS ++ + +P+TS
Sbjct: 626 IIEHGLPDSPFASPAKSLGNPGDLYPCLVEAKESIEFSSTSAFEISAAVPTTS 678
>gi|224054502|ref|XP_002298292.1| predicted protein [Populus trichocarpa]
gi|222845550|gb|EEE83097.1| predicted protein [Populus trichocarpa]
Length = 428
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 262/474 (55%), Positives = 311/474 (65%), Gaps = 65/474 (13%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MDSYEA +VFSRI+ ++PENASKIMGYLL+QD G+KEMIR AFGPETLLHNLI AKT
Sbjct: 1 MDSYEAANMVFSRIQNLEPENASKIMGYLLLQDYGEKEMIRFAFGPETLLHNLILYAKTQ 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYS-- 118
L S S+S PSS PS P S+ + + N + TN ++ ++ S ++S
Sbjct: 61 LGFLSNKTSSSPFIPSS-RPS------PLSIPSSRITNNNGFDITNPSSPSTNSWHFSTP 113
Query: 119 NISNNNSYAS-----SDIADDFHQFQDHLS----FLDESSELASSTDADHHNHHHLLKRS 169
N ++ SYAS S I FQ +S F ++ S T + H KRS
Sbjct: 114 NSTSPLSYASVVNGASSINASSTPFQPTVSLSNAFPYSNNNTTSPTKYGDNGSH---KRS 170
Query: 170 LSLPVHPNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSP 229
S+P + C GS+D NSG GWK CLYF++GFCKNG+ C+F H ++A AAIVGSP
Sbjct: 171 FSVP---DTCVGSEDS-NSGFGWKPCLYFSRGFCKNGSGCRFVH---GDSADTAAIVGSP 223
Query: 230 SKLSEFELSQELLLRSKASVQQRKLAAASQFMGS---FPYNKCMNFLNDTQRSAALMMGD 286
+L EFE ++L RSKA+ QQ+KLAAASQFM +NK ++FL+ Q
Sbjct: 224 GELYEFEQCLQIL-RSKAAAQQKKLAAASQFMAGANFLSHNKSLDFLHQQQ--------- 273
Query: 287 ELHNKFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPY 346
ND S +PS+RQIYLTFPADSTFREEDVSNYFSIYGPV DVRIPY
Sbjct: 274 --------------ND---SQSPSSRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPY 316
Query: 347 QQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERG 406
QQKRMFGFVTFV+ ETV+LILAKGNPHFVCDSRVLVKPYKEKGKV +KK Q QQQ+ER
Sbjct: 317 QQKRMFGFVTFVFAETVRLILAKGNPHFVCDSRVLVKPYKEKGKVPDKKHHQ-QQQIERE 375
Query: 407 EYSSACSSPSG-----PFDFHFGGRMLYNNQEMLRRKLEEQADLQQAIEMQGRR 455
EY SAC SPS FD H G RMLYN QEML RKL+E+AD QQAIE QGRR
Sbjct: 376 EY-SACPSPSRINSREAFDLHIGARMLYNTQEMLSRKLKEEADFQQAIESQGRR 428
>gi|224054504|ref|XP_002298293.1| predicted protein [Populus trichocarpa]
gi|222845551|gb|EEE83098.1| predicted protein [Populus trichocarpa]
Length = 674
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 288/708 (40%), Positives = 382/708 (53%), Gaps = 135/708 (19%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD++E T ++ +++K++DPENAS+IMG++LIQD +K+++RLAFGPETLL N++FKAK H
Sbjct: 1 MDTHEITNILLTKLKSLDPENASRIMGFILIQDPTEKDLLRLAFGPETLLQNVVFKAKIH 60
Query: 61 L----------------------------SNASASASASATNPSSL-----SPSSAPW-- 85
L +N +S TN S +PS PW
Sbjct: 61 LGLSTNTLSTPSTPSSPSPLNPIARPCNNTNPFPQSSPRITNNGSFLDFSKNPSPNPWSV 120
Query: 86 --LP-------------PASLSYANVVNGSSCSSTNAAASASESLYYSNISNNNSYASSD 130
LP LSY N+ +GS + N N S++
Sbjct: 121 HGLPNNSDSKSSISPKSSPFLSYDNIRSGSVLVPP----------FSRNGGNGGGVCSNN 170
Query: 131 IADDFHQFQ--DHLSFLDESS-----------ELASSTDADHHNHHHLLKRSLSLPVHPN 177
AD ++Q DHLSF D+ S ++ + A+ H H + S S +
Sbjct: 171 SADFLGEYQSDDHLSFFDDPSSKNEDFMDQRVQMGGYSVANGDVHLHRRRFSES-----D 225
Query: 178 VCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHH--IHSPEAATAAAIVGSPSKLSEF 235
C G++D GL ++ CLYFA+GFCKNG +CKF H + E A+V SP ++ E
Sbjct: 226 ACSGAEDG-GFGLRYRQCLYFARGFCKNGESCKFGHGDENMAEVNVGGALVSSPREMEEL 284
Query: 236 ELSQELLLRSKASVQQRK------LAAASQFMGSFPYNKCMNFL----NDTQRSAALMMG 285
L Q+ + + +VQQ++ A Q YNK MNFL N+ +R A MMG
Sbjct: 285 YLQQQEEMMKRKAVQQQQEEMMKMKAVQQQQQQRLAYNKHMNFLLLQQNEAERFGAAMMG 344
Query: 286 DELHNKFGTCSRPERNDFFG-----SMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVH 340
DE + KFG +R RNDF N ++RQIYLTFPADS+F++EDVSNYFS +GPV
Sbjct: 345 DEFY-KFGR-TRGGRNDFLAMGMAEKANSASRQIYLTFPADSSFKDEDVSNYFSSFGPVQ 402
Query: 341 DVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQ 400
DVRIPYQQKRMFGFVTFVYPETVK ILAKGNPH++C+SRVLVKPYKEKGKV + Q
Sbjct: 403 DVRIPYQQKRMFGFVTFVYPETVKEILAKGNPHYICESRVLVKPYKEKGKVANRT----Q 458
Query: 401 QQMERGEYSSACSSPSG-----PFDFHFGGRMLYNNQE-MLRRKLEEQADLQQAIEMQGR 454
Q +ERG +S A SSPSG D H G RMLYN E MLRRKLEEQA+LQQAIE+QGR
Sbjct: 459 QLLERGGFSPA-SSPSGFDPRELCDLHLGARMLYNTPEMMLRRKLEEQAELQQAIELQGR 517
Query: 455 RLMNLQL-HLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESG 513
RL+NLQL L+ +H +H H LS G+PI PT H+P N+T I +G +E +
Sbjct: 518 RLINLQLPDLRGDHAHHH-QHSLSVGAPISLPT-HHTPINQTDILTSDGKNEITLEDNGN 575
Query: 514 VSPVTDSQITDHLFHREENRTSNHNKNNNSDGNDKEEK------PNSDENDLCDSLEHIL 567
S + S + ++ + NN N K E N + + L S E+
Sbjct: 576 CSGASKSTLVPVAAENLQDEVNAACIQNNDTVNCKVESFTESHGSNFERDSLTKSSENQH 635
Query: 568 PDNLFASPKKSAGGHITVFSSASAEVDEKNTSSVTS-TNNNTKLPSTS 614
PD S + AEV+E N SV+S + N+ +P+TS
Sbjct: 636 PD----------------MSPSRAEVEESNELSVSSCSENDASVPTTS 667
>gi|356497343|ref|XP_003517520.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
[Glycine max]
Length = 646
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 291/667 (43%), Positives = 385/667 (57%), Gaps = 81/667 (12%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
M S EAT +V S+IK DPENASKIMGYLL+ + E+IR+A P+T+L L+ + K+H
Sbjct: 1 MGSCEATNVVLSKIKNFDPENASKIMGYLLMNLE-ESELIRVACSPDTVLQTLVLRVKSH 59
Query: 61 LS-----------------NASASASASATNPSSLSPSSAPW------LPPASLSYA-NV 96
L N A + +++NP S + + P+S S+A N
Sbjct: 60 LGLTLSTPSSPSQFPPSPLNPIARLTGTSSNPFSRGGPTNGFDFTRNPASPSSHSHAWNF 119
Query: 97 VNGSSCSSTNAAASASESLYYSNISNNNSYASSDIA-DDFHQFQDHLSFLDESS------ 149
N + S ++ L Y NI + + D D Q ++ FL++SS
Sbjct: 120 PNNNPIS-----PKSTPLLSYDNIRALSPRVNGDCDFVDEQQVNEYFPFLNDSSKNEDLV 174
Query: 150 ----ELASSTDADHHNHHHLLKRSLSLPVHPNVCFGSDDDPNSGLGWKHCLYFAKGFCKN 205
EL H HL +RS S +V FG D+ GLG+K CLYFA+GFCKN
Sbjct: 175 DPRLELGVGAQNWHSGDSHLHRRSYSAS---DVGFGCDE-AAPGLGYKPCLYFARGFCKN 230
Query: 206 GTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQRKLAAASQFMGSFP 265
GT CKF +H + AIVGSPSKL E +E + R KA QR + S
Sbjct: 231 GTNCKF--LHGAFTDSLDAIVGSPSKLEGMEQREEFV-RFKAPQLQRIASGPSAAAREKY 287
Query: 266 YNKCMNFLNDTQRSAA-LMMGDELHNKFGTCSRPERNDFFGSM-----NPSARQIYLTFP 319
Y M ++QR+AA MMG+E +N FG RPERNDF ++ N ++RQIYLTFP
Sbjct: 288 YEFLMQ---ESQRAAAAFMMGEEFYN-FG-WDRPERNDFLAAISGEKPNSASRQIYLTFP 342
Query: 320 ADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSR 379
A+STF++EDVS YFS +GPV DVRIPYQQKRMFGFVTFVYPETV+LIL+KGNPHF+CDSR
Sbjct: 343 AESTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVRLILSKGNPHFICDSR 402
Query: 380 VLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSG-----PFDFHFGGRMLYNNQE- 433
VLVKPYKEKGKV +K+QQQ QQQ+ERG+ S C SPSG P+DFH G RMLYN +
Sbjct: 403 VLVKPYKEKGKVPDKRQQQQQQQLERGDLS-PCLSPSGFGSKEPYDFHLGARMLYNPHDI 461
Query: 434 MLRRKLEEQADLQQAIEMQGRRLMNLQL-HLKNNHLNHQFHHGLSNGSPIPSPTLSHSPN 492
+LRRK+EEQA+LQQ +E+Q RRL NLQL KNN ++H LS G+P+ P HS
Sbjct: 462 LLRRKIEEQAELQQVLELQERRLKNLQLPDFKNNPIHHH-QRSLSVGTPLVLPHQLHSHI 520
Query: 493 NRTRIFPFEGSDEEVPPEESGVSPVTDSQITDHLFHREENRTSNHNKNNNSDGNDKE--- 549
N + P + + + +G S S T+ L E + + + + +D E
Sbjct: 521 NDAGLSP-----DSIKGDITGYSGSFTS--TNSLGIASEQQQQLQKEVDPAHIDDSESRN 573
Query: 550 --EKPNSDENDLCDSLEHILPDNLFASPKKSAGGHITVFSSASAEVDEKNTSSVTSTNNN 607
E N++ DL +S+ LPD+LFASP K+AGG+ FS+ AEV+E S +S++ +
Sbjct: 574 LMESGNAEGVDLSNSVGQALPDSLFASPTKAAGGYHADFSTL-AEVNESAVFSASSSSQD 632
Query: 608 TKLPSTS 614
P+TS
Sbjct: 633 KLEPTTS 639
>gi|115474123|ref|NP_001060660.1| Os07g0682400 [Oryza sativa Japonica Group]
gi|122166929|sp|Q0D3J9.1|C3H53_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 53;
Short=OsC3H53
gi|113612196|dbj|BAF22574.1| Os07g0682400 [Oryza sativa Japonica Group]
gi|215767061|dbj|BAG99289.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767076|dbj|BAG99304.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 682
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 303/733 (41%), Positives = 391/733 (53%), Gaps = 145/733 (19%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG+LLIQD+G+KEMIRLAFGPE LLH ++ KA+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L AS + P+S++ ++A P LS N + S + +S S
Sbjct: 61 LGLLPASGPGT---PTSVAAAAAAAHSPFMLSRQNSGRCGTAPSPLSVSSPSSWAPPPVF 117
Query: 121 SNNNS----------------------------YASSDIADDFHQFQDHLSFLDESS--- 149
S NNS + D D Q QD L+FL+E
Sbjct: 118 SRNNSISNGAGEEMVGLGDELISPANGGGPPSPFFGGDPLMDELQLQDQLAFLNEGGVPA 177
Query: 150 ----------ELASSTDADHHNHHHLLKRSLSLPVH------PNVCFGSDDDPNSGLGWK 193
E S D + L + P H +C G D GLGWK
Sbjct: 178 GHQMPMFDGGECRSPGGGDGGLFSYNLGWANGGPGHRRSASVSELCLGGAD----GLGWK 233
Query: 194 HCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQRK 253
CLY+A+G+CKNG+AC+F H P+ A PS + + Q+ L+RSK+ QR
Sbjct: 234 PCLYYARGYCKNGSACRFVHGGLPDDAAGKM---DPSAVEQ--QCQDFLIRSKS---QRL 285
Query: 254 LAAASQF--MGSFP-----YNKCMNFL-------NDTQRSAA---LMMGDELHNKFGTCS 296
AAA + GS P KC++ L N++QR+AA LM+G + +KF
Sbjct: 286 AAAAFPYSPTGSLPGSPSAATKCLSLLLQQQQQQNESQRAAAAAALMLGGDEAHKFMGRP 345
Query: 297 RPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVT 356
R ER DF MNP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVT
Sbjct: 346 RLERADFASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVT 405
Query: 357 FVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPS 416
FVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +K ++QHQ ER ++SS C++P+
Sbjct: 406 FVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQHQPG-ERVDFSS-CTTPT 463
Query: 417 G-----PFDFH-FGGRMLYN----NQEMLRRK---LEEQADLQQAIEMQGRRLMNLQLHL 463
G PFD H G RML + N+ +LRRK ++ A+LQQAIE+ RRLM LQL
Sbjct: 464 GLDARDPFDMHQLGARMLQHSNSANEMLLRRKLEEQQQAAELQQAIELHSRRLMGLQL-- 521
Query: 464 KNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQIT 523
L+ + S + P+P + PF S +G SP ++
Sbjct: 522 ----LDFK-----SRAAAAPTPIGN----------PFSASQTAA--NATGESPPDSGELG 560
Query: 524 DHLFHREENRTSNHNKNNNSDGNDKEE------KPNSDENDLCDSLEHILPDNLFASPKK 577
+ H K N G DKEE PN+D + S+EH LPD+ FASP K
Sbjct: 561 -----KGSGFLLAHKKAVN--GADKEESTGESSSPNTDSD---QSVEHNLPDSPFASPTK 610
Query: 578 SAGGHITVFSSASAEVDEKNTSSVTST-----------NNNTKLPSTSLNMSSLNSCLLQ 626
SAG F+ AE+ ++ ++T N LPS +L+M S
Sbjct: 611 SAGFARDPFAPTEAEISATASTGCSATYVGINNGASNGGTNHLLPS-ALDMPSPKPYFFP 669
Query: 627 MSRFSSGQGTIGM 639
MSR +S G IGM
Sbjct: 670 MSRLASDHGAIGM 682
>gi|326526009|dbj|BAJ93181.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 296/739 (40%), Positives = 383/739 (51%), Gaps = 142/739 (19%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VF+RI+ +DP++A+KIMG LLIQD+G+KEMIRLAFGPE LL ++ KA+
Sbjct: 1 MDAYEATKVVFARIQGLDPDHAAKIMGLLLIQDHGEKEMIRLAFGPEALLLAVMAKARKD 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSC------------------ 102
L AS + P + + ++A P LS N G
Sbjct: 61 LGLLPAS-----SGPGTPTSAAATGHSPFMLSRQNPGRGGGGTAPSPLSVSSPSSWAPPP 115
Query: 103 --SSTNAAASASESLYYSNISNN-------------NSYASSDIADDFHQFQDHLSFLDE 147
S +N+ ++ S + + + S I D+ H QD L+FL E
Sbjct: 116 VFSRSNSVSNGSAAEEMAGVGEELMSPANGPQSPFFGGGGDSLILDELH-LQDQLAFLSE 174
Query: 148 --------------SSELASSTDADHHNHHHLLKRSLSLPVH------PNVCFGSDDDPN 187
+ E S + D + + P H +CFG D
Sbjct: 175 GGMGGGGRQLPLFDNGECRSPSGGDGGLFPYGAGWANGGPGHRRSASVSELCFGGGD--- 231
Query: 188 SGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKA 247
GLGWK CLY+A+G+CKNG+AC+F H P+ A + + + + Q+ LLRSK+
Sbjct: 232 -GLGWKPCLYYARGYCKNGSACRFVHGGFPDDLAGAKM----DQAAVEQQCQDFLLRSKS 286
Query: 248 SVQQRKLAAASQF----MGSFP-----YNKCMNFL--------NDTQRSAA------LMM 284
++LAAA+ F GS P +KC++ L ND QR+AA LM+
Sbjct: 287 ----QRLAAAAGFAYSPTGSLPGSPSAASKCLSLLLQQQQQQQNDGQRAAAAAAAAALML 342
Query: 285 GDELHNKFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRI 344
G + +KF R +R DF MNP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRI
Sbjct: 343 GGDEAHKFMNRPRLDRGDFASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRI 402
Query: 345 PYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQME 404
PYQQKRMFGFVTFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +K + +QQ E
Sbjct: 403 PYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKFR---KQQGE 459
Query: 405 RGEYSSACSSPSG-----PFDFH-FGGRMLYN----NQEMLRRKLEEQ---ADLQQAIEM 451
R ++SS C SP+G PFD H G RML + N+ +LRRKLEEQ +LQQAIE+
Sbjct: 460 RVDFSS-CGSPTGLDARDPFDLHQIGARMLQHSNSANEMLLRRKLEEQQQAVELQQAIEL 518
Query: 452 QGRRLMNLQ-LHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPE 510
Q RRLM LQ L LK + +PI P T F E PP
Sbjct: 519 QSRRLMGLQMLDLKTRSAAAAAAA--TAPTPIGKPFSPTHTTATTPTF-------ESPP- 568
Query: 511 ESGVSPVTDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDN 570
+SG + H +N + +K+ S D PN+D + S EH LPD+
Sbjct: 569 DSGEQGTGCGFLFPH-----KNAVNGADKDETS--GDSTTSPNTDSD---QSAEHNLPDS 618
Query: 571 LFASPKKSAGGHITVFSSASAEVDEKNTSS---VTSTNNNTK-------LPSTSLNMSSL 620
FASP KS F+ AE+ S+ N T+ L +L++ S
Sbjct: 619 PFASPTKSGAFARDAFARTDAEIAAATASTGCNAAYNGNGTRNGGITNHLLPPALDIPSP 678
Query: 621 NSCLLQMSRFSSGQGTIGM 639
MSR SS G IGM
Sbjct: 679 KPYFFPMSRLSSDHGAIGM 697
>gi|147770113|emb|CAN69883.1| hypothetical protein VITISV_031889 [Vitis vinifera]
Length = 682
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 260/518 (50%), Positives = 317/518 (61%), Gaps = 59/518 (11%)
Query: 126 YASSDIADDFHQFQDHLSFLDESSELASSTDAD-HHNHHHLLKRSLSLPVHPNVCFGSDD 184
Y +D+ D+F Q QD LSFL++ S + D ++ L + F S
Sbjct: 173 YGGNDLIDEF-QLQDQLSFLNDGSPTLGPKNPDLFYSQQELASSPGGGSGGDAMGFPS-- 229
Query: 185 DPNSGLGWKHCLYFAKGFCKNGT----ACKFHHIHSPEAATAAAIV---GSPSKLSEFEL 237
GW G NG +C + G PSK+ E
Sbjct: 230 -----YGW--------GAAANGLPHRRSCSVPSRRRLRLRSGFGGRSHGGXPSKIEMMEQ 276
Query: 238 SQELLLRSKASVQQRKLAAASQFMGS--FPYN-KCMNFL-----NDTQRSAA-LMMGDEL 288
ELL RSK S QQ++LAAASQ M S FPY+ KCMNFL D+QR+AA LMMGD++
Sbjct: 277 CHELL-RSK-SAQQQRLAAASQIMASASFPYSAKCMNFLLQQQQTDSQRAAAALMMGDDM 334
Query: 289 HNKFGTCSRPERNDFF----GSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRI 344
H KFG SR ER +F G +NP +RQIYLTFPADSTFREEDVSNYFSI+GPV DVRI
Sbjct: 335 H-KFGR-SRLERGEFMNGGAGMVNPGSRQIYLTFPADSTFREEDVSNYFSIFGPVQDVRI 392
Query: 345 PYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQME 404
PYQQKRMFGFVTFVYPETVKLILAKGNPHFVCD+RVLVKPYKEKGKV +KKQQQ QQQ+E
Sbjct: 393 PYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQQQQQVE 452
Query: 405 RGEYSSACSSPSG-----PFDFHFGGRMLYNNQEML-RRKLEEQADLQQAIEMQGRRLMN 458
RGE+ SACS+P+G P+D G RM YN Q+ML RRKLEEQADLQQAIE+QGRRLM
Sbjct: 453 RGEF-SACSTPTGLDSRDPYDLQLGARMFYNTQDMLWRRKLEEQADLQQAIELQGRRLMG 511
Query: 459 LQLHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVT 518
LQL + Q H LS G+PIPSPT S S N+ I P + S E PEE+ SP T
Sbjct: 512 LQLL---DVKKQQHHRALSTGAPIPSPTHSPSFFNQPLILPSDRSSPEA-PEENCSSPAT 567
Query: 519 DSQITDHLFHREENRTSNHNK------NNNSDGNDKEEKPNSDENDLCDSLEHILPDNLF 572
+ +++ + + + N +G KE N D +DL +SLEH LPD+ F
Sbjct: 568 AIPVNAVAAEQQQQTVTTAAEKEFTGIDENGNGTGKESSHNED-SDLPESLEHNLPDSPF 626
Query: 573 ASPKKSAGGHITVFSSASAEVDEKNTSSVTSTNNNTKL 610
ASP K AG +++ FS+AS+EV++ T S + N + L
Sbjct: 627 ASPTKGAGEYLSTFSNASSEVEKNTTVSGSPAVNGSPL 664
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 55/61 (90%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEAT++VFSRI+ +DPENASKIMG LLIQD+G+KEMIRLAFGPE L+H++I KA+
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|222637701|gb|EEE67833.1| hypothetical protein OsJ_25610 [Oryza sativa Japonica Group]
Length = 696
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 297/700 (42%), Positives = 380/700 (54%), Gaps = 128/700 (18%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG+LLIQD+G+KEMIRLAFGPE LLH ++ KA+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L AS + P+S+S ++A P LS N C + + S L I
Sbjct: 61 LGLLPASGPGT---PTSVSAAAAAAHSPFMLSRQNS---GRCGTAPSPLSEMVGLGDELI 114
Query: 121 SNNNS------YASSDIADDFHQFQDHLSFLDESS-------------ELASSTDADHHN 161
S N + D D Q QD L+FL+E E S D
Sbjct: 115 SPANGGGPPSPFFGGDPLMDELQLQDQLAFLNEGGVPAGHQMPMFDGGECRSPGGGDGGL 174
Query: 162 HHHLLKRSLSLPVH------PNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIH 215
+ L + P H +C G D GLGWK CLY+A+G+CKNG+AC+F H
Sbjct: 175 FSYNLGWANGGPGHRRSASVSELCLGGAD----GLGWKPCLYYARGYCKNGSACRFVHGG 230
Query: 216 SPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQRKLAAASQF--MGSFP-----YNK 268
P+ A PS + + Q+ L+RSK+ QR AAA + GS P K
Sbjct: 231 LPDDAAGKM---DPSAVEQ--QCQDFLIRSKS---QRLAAAAFPYSPTGSLPGSPSAATK 282
Query: 269 CMNFL-------NDTQRSAA---LMMGDELHNKFGTCSRPERNDFFGSMNPSARQIYLTF 318
C++ L N++QR+AA LM+G + +KF R ER DF MNP +RQIYLTF
Sbjct: 283 CLSLLLQQQQQQNESQRAAAAAALMLGGDEAHKFMGRPRLERADFASMMNPGSRQIYLTF 342
Query: 319 PADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDS 378
PADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHF+CD+
Sbjct: 343 PADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDA 402
Query: 379 RVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSG-----PFDFH-FGGRMLYN-- 430
RVLVKPYKEKGKV +KKQ Q ER ++SS C++P+G PFD H G RML +
Sbjct: 403 RVLVKPYKEKGKVPDKKQHQPG---ERVDFSS-CTTPTGLDARDPFDMHQLGARMLQHSN 458
Query: 431 --NQEMLRRK---LEEQADLQQAIEMQGRRLMNLQLHLKNNHLNHQFHHGLSNGSPIPSP 485
N+ +LRRK ++ A+LQQAIE+ RRLM LQL L+ + S + P+P
Sbjct: 459 SANEMLLRRKLEEQQQAAELQQAIELHSRRLMGLQL------LDFK-----SRAAAAPTP 507
Query: 486 TLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQITDHLFHREENRTSNHNKNNNSDG 545
+ PF S +G SP ++ + H K N G
Sbjct: 508 IGN----------PFSASQTAA--NATGESPPDSGELG-----KGSGFLLAHKKAVN--G 548
Query: 546 NDKEE------KPNSDENDLCDSLEHILPDNLFASPKKSAGGHITVFSSASAEVDEKNTS 599
DKEE PN+D + S+EH LPD+ FASP KSAG F+ AE+ ++
Sbjct: 549 ADKEESTGESSSPNTDSD---QSVEHNLPDSPFASPTKSAGFARDPFAPTEAEISATAST 605
Query: 600 SVTST-----------NNNTKLPSTSLNMSSLNSCLLQMS 628
++T N LPS +L+M S MS
Sbjct: 606 GCSATYVGINNGASNGGTNHLLPS-ALDMPSPKPYFFPMS 644
>gi|357481341|ref|XP_003610956.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355512291|gb|AES93914.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 685
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 285/702 (40%), Positives = 381/702 (54%), Gaps = 115/702 (16%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
M SYEAT +V +++K DPENASKIMG+LL+ + E++RLA P+ +LHNL + KTH
Sbjct: 1 MGSYEATNVVLAKVKNFDPENASKIMGFLLMNLE-EYELVRLACCPDHVLHNLAIRVKTH 59
Query: 61 LS-NASASASASATNPSSL---------------------------SPSSAPWLPPA--- 89
L N S +S S NP SPS W P+
Sbjct: 60 LGMNLSTPSSPSPLNPIGRITSSSNNPFSKSSPRGSNGFDFNRNPSSPSGNVWSQPSFPK 119
Query: 90 ---------SLSYANVVNGSSCSSTNAAASASESLYYSNISNNNSYASSDIADDFHQFQD 140
+SY N+ G + A S +S NN Y D D+ Q +
Sbjct: 120 NPISPKFNPLMSYENIQGGVGVVGGGGGSGAGGSCAFSPRVNNGDY---DFVDE-QQLNE 175
Query: 141 HLSFLDESSE-----------------LASSTDADHHNHHHLLKRSLSLPVHPNVCFGSD 183
FL+ESS S + D HN H KRS S N S
Sbjct: 176 CFPFLNESSNGDDLVDPRLEMGVGGQNWISGNNGDAHNIH---KRSFSA----NDASFSV 228
Query: 184 DDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLL 243
++ G G+K CLYFA+GFCKNG+ CKF H S +A + A+VGSP K E +E +
Sbjct: 229 EESGLGFGFKPCLYFARGFCKNGSNCKFVHGDSIDA-NSGAVVGSP-KFEGLEQHEEFM- 285
Query: 244 RSKASVQQRKLAAASQFM--GSFP--YNKCMNFL----NDTQRSAALM---MGDELHNKF 292
R KA+ Q +++ AASQ G+ P Y+K ++ L +D QR+ A MG+E N
Sbjct: 286 RFKAAQQHQRMVAASQLAAGGTSPVSYDKYIDLLMQQHSDNQRAVAAAAFAMGEEYFNIT 345
Query: 293 GTCSRPERNDFFGSM-----NPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQ 347
G RPERN+F + N ++RQIYLTFPA+STF++EDVS YFS +GPV DVRIPYQ
Sbjct: 346 GR-GRPERNEFLAMVSGDKPNSASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQ 404
Query: 348 QKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGE 407
QKRMFGFVTFV+PETV++IL+KGNPHF+CDSRVLVKPYKEKGKV +K+ Q QQQ ERG+
Sbjct: 405 QKRMFGFVTFVFPETVRVILSKGNPHFICDSRVLVKPYKEKGKVPDKRHQHQQQQFERGD 464
Query: 408 YSSACSSPSG-----PFDFHFGGRMLYNNQE-MLRRKLEEQ-ADLQQAIEMQGRRLMNLQ 460
+ S C SPS PFDFH G RMLYN + +LRRK+EEQ AD QQ +E+Q RRL +LQ
Sbjct: 465 F-SPCLSPSAFDSKEPFDFHPGTRMLYNPHDILLRRKIEEQAADFQQVLELQERRLKSLQ 523
Query: 461 L-HLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTD 519
L KNN ++H LS G+P+ P HS N + P + + + +G S
Sbjct: 524 LPDFKNNPIHHH-QRSLSVGAPLVFPHQLHSHVNHAGLSP-----DNIQGDFTGYSGSLT 577
Query: 520 SQIT------DHLFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCD-SLEHILPDNLF 572
S + H+E + + ++ + ++ S+ DL ++EH LPD+LF
Sbjct: 578 SAGSLGAASEQQELHKEADPSCIDAVTAAAESGNLKDVAKSEGVDLGKRNVEHTLPDSLF 637
Query: 573 ASPKKSAGGHITVFSSASAEVDEKNTSSVTSTNNNTKLPSTS 614
ASP K+AG +++ FS +E N S+ ST + K ST+
Sbjct: 638 ASPTKAAGDYLSDFSPQ----EEANESTAFSTTLSQKFESTT 675
>gi|33146675|dbj|BAC80021.1| putative DAZ associated protein 1 [Oryza sativa Japonica Group]
Length = 682
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 299/726 (41%), Positives = 385/726 (53%), Gaps = 147/726 (20%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG+LLIQD+G+KEMIRLAFGPE LLH ++ KA+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L AS + P+S++ ++A P LS N + S + +S S
Sbjct: 61 LGLLPASGPGT---PTSVAAAAAAAHSPFMLSRQNSGRCGTAPSPLSVSSPSSWAPPPVF 117
Query: 121 SNNNS----------------------------YASSDIADDFHQFQDHLSFLDESS--- 149
S NNS + D D Q QD L+FL+E
Sbjct: 118 SRNNSISNGAGEEMVGLGDELISPANGGGPPSPFFGGDPLMDELQLQDQLAFLNEGGVPA 177
Query: 150 ----------ELASSTDADHHNHHHLLKRSLSLPVH------PNVCFGSDDDPNSGLGWK 193
E S D + L + P H +C G D GLGWK
Sbjct: 178 GHQMPMFDGGECRSPGGGDGGLFSYNLGWANGGPGHRRSASVSELCLGGAD----GLGWK 233
Query: 194 HCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQRK 253
CLY+A+G+CKNG+AC+F H P+ A PS + + Q+ L+RSK+ QR
Sbjct: 234 PCLYYARGYCKNGSACRFVHGGLPDDAAGKM---DPSAVEQ--QCQDFLIRSKS---QRL 285
Query: 254 LAAASQF--MGSFP-----YNKCMNFL-------NDTQRSAA---LMMGDELHNKFGTCS 296
AAA + GS P KC++ L N++QR+AA LM+G + +KF
Sbjct: 286 AAAAFPYSPTGSLPGSPSAATKCLSLLLQQQQQQNESQRAAAAAALMLGGDEAHKFMGRP 345
Query: 297 RPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVT 356
R ER DF MNP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVT
Sbjct: 346 RLERADFASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVT 405
Query: 357 FVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPS 416
FVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +KKQ Q ER ++SS C++P+
Sbjct: 406 FVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKKQHQPG---ERVDFSS-CTTPT 461
Query: 417 G-----PFDFH-FGGRMLYN----NQEMLRRK---LEEQADLQQAIEMQGRRLMNLQLHL 463
G PFD H G RML + N+ +LRRK ++ A+LQQAIE+ RRLM LQL
Sbjct: 462 GLDARDPFDMHQLGARMLQHSNSANEMLLRRKLEEQQQAAELQQAIELHSRRLMGLQL-- 519
Query: 464 KNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQIT 523
L+ + S + P+P + PF S +G SP ++
Sbjct: 520 ----LDFK-----SRAAAAPTPIGN----------PFSASQTAA--NATGESPPDSGELG 558
Query: 524 DHLFHREENRTSNHNKNNNSDGNDKEE------KPNSDENDLCDSLEHILPDNLFASPKK 577
+ H K N G DKEE PN+D + S+EH LPD+ FASP K
Sbjct: 559 -----KGSGFLLAHKKAVN--GADKEESTGESSSPNTDSD---QSVEHNLPDSPFASPTK 608
Query: 578 SAGGHITVFSSASAEVDEKNTSSVTST-----------NNNTKLPSTSLNMSSLNSCLLQ 626
SAG F+ AE+ ++ ++T N LPS +L+M S
Sbjct: 609 SAGFARDPFAPTEAEISATASTGCSATYVGINNGASNGGTNHLLPS-ALDMPSPKPYFFP 667
Query: 627 MSRFSS 632
MSR +S
Sbjct: 668 MSRNTS 673
>gi|356540386|ref|XP_003538670.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
[Glycine max]
Length = 658
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 283/687 (41%), Positives = 386/687 (56%), Gaps = 109/687 (15%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
M S EAT +V S+IK DPENASKIMGYLL+ + E+IRLA P+ +LH L+ + K H
Sbjct: 1 MGSCEATNVVLSKIKNFDPENASKIMGYLLMNLE-ESELIRLACSPDPVLHTLVLRVKNH 59
Query: 61 LS-------------------NASASASASATNPSSLS--PSSA-PWLPPASLSYANVVN 98
LS N +A +A ++NP S P++ + S ++ +
Sbjct: 60 LSGLTLSSTTPSSPSLPPSPLNPTARLTAISSNPFSRGGGPTNGFDFTRNHPSSPSSHSH 119
Query: 99 GSSCSSTNAAASASESLY-YSNISNNNSYASSDIADDF---HQFQDHLSFLDESS----- 149
+ + N + S L+ Y NI + +D DF Q ++ FL++SS
Sbjct: 120 AWNFPNNNPISPKSTPLFSYDNIRALSPRVVNDDCGDFVDEQQVNEYFPFLNDSSKNEDL 179
Query: 150 -----ELASSTDADHHNHHHLL-KRSLSLPVHPNVCFGSDDDPNS--GLGWKHCLYFAKG 201
E H HL +RS S +V FG D+ + GLG+K CLYFA+G
Sbjct: 180 VDPRLEFGVGAQNWHSGDSHLQHRRSYSAS---DVGFGCDEAAAAAPGLGYKPCLYFARG 236
Query: 202 FCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQRKLAAASQFM 261
FCKNGT CKF +H + AIVGSPSK E +E +R + Q +++A+
Sbjct: 237 FCKNGTNCKF--LHGAFTDSLDAIVGSPSKQLEGMEQREEFVRFNKAPQLQRIASGPSAA 294
Query: 262 GSFPYNKCMNFLNDTQR--SAALMMGDELHNKFGTCSRPERNDFFGSM-----NPSARQI 314
Y + + + ++QR +AA +MG+E +N FG +PERNDF ++ N +++QI
Sbjct: 295 AREKYFEFL--IQESQRLAAAAFIMGEEFYN-FG-WDKPERNDFLAAISSEKSNSASQQI 350
Query: 315 YLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHF 374
YLTFPA+STF++EDVS YFS +GPV DVRIPYQQKRMFGFVTFVYPETV+LIL+KGNPHF
Sbjct: 351 YLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVRLILSKGNPHF 410
Query: 375 VCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSG-----PFDFHFGGRMLY 429
+CDSRVLVKPYKEKGKV +K+QQ QQQ+ERG+ S C SPSG P+DFH G RMLY
Sbjct: 411 ICDSRVLVKPYKEKGKVPDKRQQHQQQQLERGDL-SPCLSPSGFGSKEPYDFHLGARMLY 469
Query: 430 NNQE-MLRRKLEEQADLQQAIEMQGRRLMNLQL-HLKNNHLNHQFHHGLSNGSPIPSPTL 487
N + +LRRK+EEQA+LQQ E+Q RRL NLQL KNN ++H LS G P+ P
Sbjct: 470 NPHDVLLRRKIEEQAELQQVRELQERRLKNLQLPDFKNNPIHHH-QRSLSVGIPLALPHQ 528
Query: 488 SHSPNNRTRIFP---------FEG-----------SDEEVPPEESGVSPVTDSQITDHLF 527
HS N + P + G SD+++P +E + + DS+
Sbjct: 529 LHSHINDAGLSPDSIKGDITGYSGSFSSTNSLGIASDQQLPLKEVDPACIDDSE------ 582
Query: 528 HREENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSAGGHITVFS 587
+GN KE N++ DL +S+E LPD+LFASP K+ G + FS
Sbjct: 583 ----------------NGNLKESG-NTEGVDLSNSVEQALPDSLFASPTKATGDYHADFS 625
Query: 588 SASAEVDEKNTSSVTSTNNNTKLPSTS 614
+ AEV+E S +S++ + P+TS
Sbjct: 626 TL-AEVNESAVFSASSSSEDKLEPTTS 651
>gi|125559631|gb|EAZ05167.1| hypothetical protein OsI_27364 [Oryza sativa Indica Group]
Length = 721
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 297/722 (41%), Positives = 383/722 (53%), Gaps = 147/722 (20%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG+LLIQD+G+KEMIRLAFGPE LLH ++ KA+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L AS + P+S++ ++A P LS N + S + +S S
Sbjct: 61 LGLLPASGPGT---PTSVAAAAAAAHSPFMLSRQNSGRCGTAPSPLSVSSPSSWAPPPVF 117
Query: 121 SNNNS----------------------------YASSDIADDFHQFQDHLSFLDESS--- 149
S NNS + D D Q QD L+FL+E
Sbjct: 118 SRNNSISNGAGEEMVGLGDELISPANGGGPPSPFFGGDPLMDELQLQDQLAFLNEGGVPA 177
Query: 150 ----------ELASSTDADHHNHHHLLKRSLSLPVH------PNVCFGSDDDPNSGLGWK 193
E S D + L + P H +C G D GLGWK
Sbjct: 178 GHQMPMFDGGECRSPGGGDGGLFSYNLGWANGGPGHRRSASVSELCLGGAD----GLGWK 233
Query: 194 HCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQRK 253
CLY+A+G+CKNG+AC+F H P+ A PS + + Q+ L+RSK+ QR
Sbjct: 234 PCLYYARGYCKNGSACRFVHGGLPDDAAGKM---DPSAVEQ--QCQDFLIRSKS---QRL 285
Query: 254 LAAASQF--MGSFP-----YNKCMNFL-------NDTQRSAA---LMMGDELHNKFGTCS 296
AAA + GS P KC++ L N++QR+AA LM+G + +KF
Sbjct: 286 AAAAFPYSPTGSLPGSPSAATKCLSLLLQQQQQQNESQRAAAAAALMLGGDEAHKFMGRP 345
Query: 297 RPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVT 356
R ER DF MNP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVT
Sbjct: 346 RLERADFASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVT 405
Query: 357 FVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPS 416
FVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +KKQ Q ER ++SS C++P+
Sbjct: 406 FVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKKQHQPG---ERVDFSS-CTTPT 461
Query: 417 G-----PFDFH-FGGRMLYN----NQEMLRRK---LEEQADLQQAIEMQGRRLMNLQLHL 463
G PFD H G RML + N+ +LRRK ++ A+LQQAIE+ RRLM LQL
Sbjct: 462 GLDARDPFDMHQLGARMLQHSNSANEMLLRRKLEEQQQAAELQQAIELHSRRLMGLQL-- 519
Query: 464 KNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQIT 523
L+ + S + P+P + PF S + +G SP ++
Sbjct: 520 ----LDFK-----SRAAAAPTPIGN----------PFSAS--QTAANATGESPPDSGELG 558
Query: 524 DHLFHREENRTSNHNKNNNSDGNDKEE------KPNSDENDLCDSLEHILPDNLFASPKK 577
+ H K N G DKEE PN+D + S+EH LPD+ FASP K
Sbjct: 559 -----KGSGFLLAHKKAVN--GADKEESTGESSSPNTDSD---QSVEHNLPDSPFASPTK 608
Query: 578 SAGGHITVFSSASAEVDEKNTSSVTST-----------NNNTKLPSTSLNMSSLNSCLLQ 626
SAG F+ AE+ ++ ++T N LPS +L+M S
Sbjct: 609 SAGFARDPFAPTEAEISATTSTGCSATYVGINNGASNGGTNHLLPS-ALDMPSPKPYFFP 667
Query: 627 MS 628
MS
Sbjct: 668 MS 669
>gi|242041061|ref|XP_002467925.1| hypothetical protein SORBIDRAFT_01g036490 [Sorghum bicolor]
gi|241921779|gb|EER94923.1| hypothetical protein SORBIDRAFT_01g036490 [Sorghum bicolor]
Length = 680
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 291/722 (40%), Positives = 376/722 (52%), Gaps = 125/722 (17%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG LLIQD+G+KEMIRLAFGPE+LLH ++ KA+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGEKEMIRLAFGPESLLHAVMAKARKD 60
Query: 61 LS---NASASASASATNPSSL-----------------SPSSAPWLPPASLSYANVVNGS 100
L AS ++ A+A + L S + W S +N +
Sbjct: 61 LGLLLPASPTSVAAAGHAPFLQLPRQNSGRAGAPSPLSVSSPSSWGHAPVFSRSNSTSNG 120
Query: 101 SCSSTNAAASASESLYYSNISNNNSYASSDIADDFHQFQDHLSFLDESS----------- 149
+ + A S + + S+D D Q Q+ L+FL+E
Sbjct: 121 TAEESTGAGEELPSPVNGGAAPFYPHQSADALLDDLQLQEQLAFLNEGGANPSHQLPGFD 180
Query: 150 --ELASSTDADHHNHHHL-LKRSLSLPVHPN------VCFGSDDDPNSGLGWKHCLYFAK 200
E S D L P H +C GS G GWK CLY+A+
Sbjct: 181 GGECRSPGPGDAGGMFAFGLGWPNGGPAHRRSASVNELCLGSGGG-GDGFGWKPCLYYAR 239
Query: 201 GFCKNGTACKFHHIHSPEAATAAAIVGSP---SKLSEFELSQELLLRSKASVQQRKLAAA 257
GFCKNG +C+F H P+ AAA+ G+ + + + Q+ L+RSK+ QR AA
Sbjct: 240 GFCKNGGSCRFVHGGLPD--DAAALAGAKMDAAADQQQQQCQDFLIRSKS---QRLGPAA 294
Query: 258 SQF--MGSFP-----YNKCMNFL--------NDTQRSAALMMG--DELHNKFGTCSRPER 300
+ GS P +KC++FL + +A+LM+G DE H KF R +R
Sbjct: 295 FPYSPTGSLPGSPSAASKCLSFLLQQQQQQHDRAAAAASLMLGGGDEAH-KFMGRPRLDR 353
Query: 301 NDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYP 360
DF MNP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYP
Sbjct: 354 ADFANMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYP 413
Query: 361 ETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSG--- 417
ETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +K ++Q Q G++S + P G
Sbjct: 414 ETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQQ-----GDFSGCTTPPGGLDA 468
Query: 418 --PFDFH-FGGRMLYN----NQEMLRRKLEEQ---ADLQQAIEMQGRRLMNLQLHLKNNH 467
PFD H G RML + N+ +LRRKLEEQ A+LQQAIE+Q RRLM LQL
Sbjct: 469 RDPFDLHQLGARMLQHSNSANELLLRRKLEEQQQVAELQQAIELQSRRLMGLQLL----D 524
Query: 468 LNHQFHHGLSNGSPIPSP---TLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQITD 524
L + + SP+P+P + S T + E PPE
Sbjct: 525 LKARAAATAAAASPLPTPIANAFASSQLVSTIVV-------ESPPESG------------ 565
Query: 525 HLFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSAGGHIT 584
+ +S + DKEE D D S EH LPD+ FASP KSA
Sbjct: 566 ----EQLKLSSGFALEGKVNAGDKEES-ACDAADSDQSGEHNLPDSPFASPTKSAALVHD 620
Query: 585 VFSSASAE-------VDEKNTSSVTSTNNNTKLPSTSLNMSSLNSCLLQMSRFSSGQGTI 637
FS+ E VD + + +N+ + P +L + S +S M R SS G +
Sbjct: 621 SFSATETENTSSHIGVDAGVGNKIDGGSNHLRPP--ALEIPSPSSYFFPMHRLSSDHGAM 678
Query: 638 GM 639
GM
Sbjct: 679 GM 680
>gi|222624858|gb|EEE58990.1| hypothetical protein OsJ_10700 [Oryza sativa Japonica Group]
Length = 686
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 296/734 (40%), Positives = 382/734 (52%), Gaps = 143/734 (19%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG LLIQD+GDKEMIRLAFGPE LLH+++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LS---NASASASASATNPSSLSP----------------------SSAPWLPPASLSYAN 95
L+ +S+S T P++ SP S + W S +N
Sbjct: 61 LALLPPPPPPSSSSPTVPAAHSPFLLSRQNSGRGPAPSPSPLSASSPSSWAQAQPFSRSN 120
Query: 96 VVNGSSCSSTNAAASASESLYYSNISNNNSYASS--------DIADDFHQFQDHLSFLDE 147
S + A E L S + A++ D+ D Q Q+ L+FL+E
Sbjct: 121 -------GSVDEVVGAGEELISPANSGGGAAANAPPFFPRGGDVLLDDFQLQEQLAFLNE 173
Query: 148 S-------------SELASSTDADHHNHH-HLLKRSLSLPVHPN------VCFGSDDDPN 187
+E S + + L + P H +C G +
Sbjct: 174 GGVNPSHPLQGFDGAECRSPGPGEGGGMFPYGLGWANGGPGHRRSASVNELCLGGGS--S 231
Query: 188 SGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKA 247
G GWK CLY+A+GFCKNG++C+F H A T AA+ + +E + Q+ LLRSK+
Sbjct: 232 DGFGWKPCLYYARGFCKNGSSCRFVHGDDAAALTGAAM---DAATAEQQQCQDFLLRSKS 288
Query: 248 SVQQRKLAAASQF--MGSFP-----YNKCMNFL-----NDTQRSAA---LMMG--DELHN 290
QR AA + GS P KC++ L ND QR+AA LM+G DE H
Sbjct: 289 ---QRLGPAAFPYSPTGSLPGSPSAATKCLSLLLQQQHNDNQRAAAAAALMLGGSDEAH- 344
Query: 291 KFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKR 350
KF R +R DF MNP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKR
Sbjct: 345 KFMGRPRLDRVDFASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKR 404
Query: 351 MFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSS 410
MFGFVTFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +KK Q G++ S
Sbjct: 405 MFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKKHQ--------GDF-S 455
Query: 411 ACSSPSG-----PFDFH-FGGRMLY----NNQEMLRRK---LEEQADLQQAIEMQGRRLM 457
C++P+G PFD H G RML N+ MLRRK ++ A+LQQAIE+ RRLM
Sbjct: 456 GCTTPTGLDGRDPFDLHQLGARMLQHSNSTNEMMLRRKLEEQQQAAELQQAIELHSRRLM 515
Query: 458 NLQLHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPV 517
+LQL N ++ P + S P T + E PP+
Sbjct: 516 DLQLLDLKNRAAAAVTTAMAMTIPTANAFGSSQPLATTMV--------ESPPD------- 560
Query: 518 TDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPN--SDENDLCDSLEHILPDNLFASP 575
+ Q+ + EE + N G DKEE S D SLEH LPD+ FASP
Sbjct: 561 SGEQLKGTGYFTEERKMVN-------GGGDKEESAGEASLNADSDQSLEHNLPDSPFASP 613
Query: 576 KKSAGGHITVFSSASAEVDEKNTSSVT------STNNNTKL----PSTSLNMSSLNSCLL 625
KS+ F++ V ++ S + TN + PST L++ S
Sbjct: 614 TKSSVSAHQSFTTTDTGVVATSSCSASHVGISAGTNAGGGINHLRPST-LDIPSPRDFFS 672
Query: 626 QMSRFSSGQGTIGM 639
SR +S G IGM
Sbjct: 673 VSSRLASDHGAIGM 686
>gi|218192752|gb|EEC75179.1| hypothetical protein OsI_11406 [Oryza sativa Indica Group]
Length = 686
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 295/734 (40%), Positives = 382/734 (52%), Gaps = 143/734 (19%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG LLIQD+GDKEMIRLAFGPE LLH+++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LS---NASASASASATNPSSLSP----------------------SSAPWLPPASLSYAN 95
L+ +S+S T P++ SP S + W S +N
Sbjct: 61 LALLPPPPPPSSSSPTVPAAHSPFLLSRQNSGRGPAPSPSPLSASSPSSWAQAQPFSRSN 120
Query: 96 VVNGSSCSSTNAAASASESLYYSNISNNNSYASS--------DIADDFHQFQDHLSFLDE 147
S + A E L S + A++ D+ D Q Q+ L+FL+E
Sbjct: 121 -------GSVDEVVGAGEELISPANSGGGAAANAPPFFPRGGDVLLDDFQLQEQLAFLNE 173
Query: 148 S-------------SELASSTDADHHNHH-HLLKRSLSLPVHPN------VCFGSDDDPN 187
+E S + + L + P H +C G +
Sbjct: 174 GGVNPSHPLQGFDGAECRSPGPGEGGGMFPYGLGWANGGPGHRRSASVNELCLGGGS--S 231
Query: 188 SGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKA 247
G GWK CLY+A+GFCKNG++C+F H A T AA+ + +E + Q+ LLRSK+
Sbjct: 232 DGFGWKPCLYYARGFCKNGSSCRFVHGDDAAALTGAAM---DAATAEQQQCQDFLLRSKS 288
Query: 248 SVQQRKLAAASQF--MGSFP-----YNKCMNFL-----NDTQRSAA---LMMG--DELHN 290
QR AA + GS P KC++ L ND QR+AA LM+G DE H
Sbjct: 289 ---QRLGPAAFPYSPTGSLPGSPSAATKCLSLLLQQQHNDNQRAAAAAALMLGGSDEAH- 344
Query: 291 KFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKR 350
KF R +R DF MNP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKR
Sbjct: 345 KFMGRPRLDRVDFASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKR 404
Query: 351 MFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSS 410
MFGFVTFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +KK Q G++ S
Sbjct: 405 MFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKKHQ--------GDF-S 455
Query: 411 ACSSPSG-----PFDFH-FGGRMLY----NNQEMLRRK---LEEQADLQQAIEMQGRRLM 457
C++P+G PFD H G RML N+ +LRRK ++ A+LQQAIE+ RRLM
Sbjct: 456 GCTTPTGLDGRDPFDLHQLGARMLQHSNSTNEMILRRKLEEQQQAAELQQAIELHSRRLM 515
Query: 458 NLQLHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPV 517
+LQL N ++ P + S P T + E PP+
Sbjct: 516 DLQLLDLKNRAAAAVTTAMAMTIPTANAFGSSQPLATTMV--------ESPPD------- 560
Query: 518 TDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPN--SDENDLCDSLEHILPDNLFASP 575
+ Q+ + EE + N G DKEE S D SLEH LPD+ FASP
Sbjct: 561 SGEQLKGTGYFTEERKMVN-------GGGDKEESAGEASLNADSDQSLEHNLPDSPFASP 613
Query: 576 KKSAGGHITVFSSASAEVDEKNTSSVT------STNNNTKL----PSTSLNMSSLNSCLL 625
KS+ F++ V ++ S + TN + PST L++ S
Sbjct: 614 TKSSVSAHQSFTTTDTGVVATSSCSASHVGISAGTNAGGGINHLRPST-LDIPSPRDFFS 672
Query: 626 QMSRFSSGQGTIGM 639
SR +S G IGM
Sbjct: 673 VSSRLASDHGAIGM 686
>gi|205688046|sp|Q10M00.2|C3H22_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 22;
Short=OsC3H22
gi|108707943|gb|ABF95738.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
Length = 688
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 296/734 (40%), Positives = 384/734 (52%), Gaps = 141/734 (19%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG LLIQD+GDKEMIRLAFGPE LLH+++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LS---NASASASASATNPSSLSP----------------------SSAPWLPPASLSYAN 95
L+ +S+S T P++ SP S + W S +N
Sbjct: 61 LALLPPPPPPSSSSPTVPAAHSPFLLSRQNSGRGPAPSPSPLSASSPSSWAQAQPFSRSN 120
Query: 96 VVNGSSCSSTNAAASASESLYYSNISNNNSYASS--------DIADDFHQFQDHLSFLDE 147
S + A E L S + A++ D+ D Q Q+ L+FL+E
Sbjct: 121 -------GSVDEVVGAGEELISPANSGGGAAANAPPFFPRGGDVLLDDFQLQEQLAFLNE 173
Query: 148 S-------------SELASSTDADHHNHH-HLLKRSLSLPVHPN------VCFGSDDDPN 187
+E S + + L + P H +C G +
Sbjct: 174 GGVNPSHPLQGFDGAECRSPGPGEGGGMFPYGLGWANGGPGHRRSASVNELCLGGGS--S 231
Query: 188 SGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKA 247
G GWK CLY+A+GFCKNG++C+F H A T AA+ + +E + Q+ LLRSK+
Sbjct: 232 DGFGWKPCLYYARGFCKNGSSCRFVHGDDAAALTGAAM---DAATAEQQQCQDFLLRSKS 288
Query: 248 SVQQRKLAAASQF--MGSFP-----YNKCMNFL-----NDTQRSAA---LMMG--DELHN 290
QR AA + GS P KC++ L ND QR+AA LM+G DE H
Sbjct: 289 ---QRLGPAAFPYSPTGSLPGSPSAATKCLSLLLQQQHNDNQRAAAAAALMLGGSDEAH- 344
Query: 291 KFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKR 350
KF R +R DF MNP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKR
Sbjct: 345 KFMGRPRLDRVDFASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKR 404
Query: 351 MFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSS 410
MFGFVTFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV + K ++HQ G++ S
Sbjct: 405 MFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPD-KYRKHQ-----GDF-S 457
Query: 411 ACSSPSG-----PFDFH-FGGRMLY----NNQEMLRRK---LEEQADLQQAIEMQGRRLM 457
C++P+G PFD H G RML N+ MLRRK ++ A+LQQAIE+ RRLM
Sbjct: 458 GCTTPTGLDGRDPFDLHQLGARMLQHSNSTNEMMLRRKLEEQQQAAELQQAIELHSRRLM 517
Query: 458 NLQLHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPV 517
+LQL N ++ P + S P T + E PP+
Sbjct: 518 DLQLLDLKNRAAAAVTTAMAMTIPTANAFGSSQPLATTMV--------ESPPD------- 562
Query: 518 TDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPN--SDENDLCDSLEHILPDNLFASP 575
+ Q+ + EE + N G DKEE S D SLEH LPD+ FASP
Sbjct: 563 SGEQLKGTGYFTEERKMVN-------GGGDKEESAGEASLNADSDQSLEHNLPDSPFASP 615
Query: 576 KKSAGGHITVFSSASAEVDEKNTSSVT------STNNNTKL----PSTSLNMSSLNSCLL 625
KS+ F++ V ++ S + TN + PST L++ S
Sbjct: 616 TKSSVSAHQSFTTTDTGVVATSSCSASHVGISAGTNAGGGINHLRPST-LDIPSPRDFFS 674
Query: 626 QMSRFSSGQGTIGM 639
SR +S G IGM
Sbjct: 675 VSSRLASDHGAIGM 688
>gi|115452803|ref|NP_001050002.1| Os03g0328900 [Oryza sativa Japonica Group]
gi|108707942|gb|ABF95737.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
gi|113548473|dbj|BAF11916.1| Os03g0328900 [Oryza sativa Japonica Group]
gi|215734917|dbj|BAG95639.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 294/732 (40%), Positives = 382/732 (52%), Gaps = 138/732 (18%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG LLIQD+GDKEMIRLAFGPE LLH+++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LS---NASASASASATNPSSLSP----------------------SSAPWLPPASLSYAN 95
L+ +S+S T P++ SP S + W S +N
Sbjct: 61 LALLPPPPPPSSSSPTVPAAHSPFLLSRQNSGRGPAPSPSPLSASSPSSWAQAQPFSRSN 120
Query: 96 VVNGSSCSSTNAAASASESLYYSNISNNNSYASS--------DIADDFHQFQDHLSFLDE 147
S + A E L S + A++ D+ D Q Q+ L+FL+E
Sbjct: 121 -------GSVDEVVGAGEELISPANSGGGAAANAPPFFPRGGDVLLDDFQLQEQLAFLNE 173
Query: 148 S-------------SELASSTDADHHNHH-HLLKRSLSLPVHPN------VCFGSDDDPN 187
+E S + + L + P H +C G +
Sbjct: 174 GGVNPSHPLQGFDGAECRSPGPGEGGGMFPYGLGWANGGPGHRRSASVNELCLGGGS--S 231
Query: 188 SGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKA 247
G GWK CLY+A+GFCKNG++C+F H A T AA+ + +E + Q+ LLRSK+
Sbjct: 232 DGFGWKPCLYYARGFCKNGSSCRFVHGDDAAALTGAAM---DAATAEQQQCQDFLLRSKS 288
Query: 248 SVQQRKLAAASQF--MGSFP-----YNKCMNFL-----NDTQRSAA---LMMG--DELHN 290
QR AA + GS P KC++ L ND QR+AA LM+G DE H
Sbjct: 289 ---QRLGPAAFPYSPTGSLPGSPSAATKCLSLLLQQQHNDNQRAAAAAALMLGGSDEAH- 344
Query: 291 KFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKR 350
KF R +R DF MNP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKR
Sbjct: 345 KFMGRPRLDRVDFASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKR 404
Query: 351 MFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSS 410
MFGFVTFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV + K ++HQ G++ S
Sbjct: 405 MFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPD-KYRKHQ-----GDF-S 457
Query: 411 ACSSPSG-----PFDFH-FGGRMLY----NNQEMLRRK---LEEQADLQQAIEMQGRRLM 457
C++P+G PFD H G RML N+ MLRRK ++ A+LQQAIE+ RRLM
Sbjct: 458 GCTTPTGLDGRDPFDLHQLGARMLQHSNSTNEMMLRRKLEEQQQAAELQQAIELHSRRLM 517
Query: 458 NLQLHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPV 517
+LQL N ++ P + S P T + E PP+
Sbjct: 518 DLQLLDLKNRAAAAVTTAMAMTIPTANAFGSSQPLATTMV--------ESPPD------- 562
Query: 518 TDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPN--SDENDLCDSLEHILPDNLFASP 575
+ Q+ + EE + N G DKEE S D SLEH LPD+ FASP
Sbjct: 563 SGEQLKGTGYFTEERKMVN-------GGGDKEESAGEASLNADSDQSLEHNLPDSPFASP 615
Query: 576 KKSAGGHITVFSSASAEVDEKNTSSVT----STNNNTKLPSTSLNMSSLN----SCLLQM 627
KS+ F++ V ++ S + S N L S+L+ +
Sbjct: 616 TKSSVSAHQSFTTTDTGVVATSSCSASHVGISAGTNAGGGINHLRPSTLDIPSPRDFFSV 675
Query: 628 SRFSSGQGTIGM 639
SR +S G IGM
Sbjct: 676 SRLASDHGAIGM 687
>gi|414866608|tpg|DAA45165.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 675
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 295/727 (40%), Positives = 373/727 (51%), Gaps = 140/727 (19%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG LLIQD+G+KEMIRLAFGPE+LLH ++ KA+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGEKEMIRLAFGPESLLHAVMAKARKD 60
Query: 61 LS---NASASASASATNPSSLSPSSAPWLPPASLSYANV----------------VNGSS 101
L AS ++ A+A + L LP + A V S
Sbjct: 61 LGLLLPASPTSVAAAGHAPFLQ------LPRQNSGRAGAPSPLSVSSPSSWSHAPVFSRS 114
Query: 102 CSSTNAAASASESLYYSNISNNNSYAS-------SDIADDFHQFQDHLSFLDESS----- 149
S++N A + S N A+ D D Q Q+ L+FL+E
Sbjct: 115 NSTSNGTAEEAAGAGEELPSPVNGGAAPFFPRQAGDALLDDLQLQEQLAFLNEGGGNPAH 174
Query: 150 ----------ELASSTDAD--------HHNHHHLLKRSLSLPVHPNVCFGSDDDPNSGLG 191
DAD HN +RS S+ +C G G G
Sbjct: 175 QLLGFDGGECRSPGPGDADGMFAFGLGWHNGGPAHRRSSSVN---ELCLGGGGGGGDGFG 231
Query: 192 WKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQE--LLLRSKASV 249
WK CLY+A+GFCKNG +C+F +H + AAA+ G+ + + + Q L+RSK
Sbjct: 232 WKPCLYYARGFCKNGGSCRF--VHGGLSDDAAALAGAKMEAAADQQQQCQDFLIRSKG-- 287
Query: 250 QQRKLAAASQF--MGSFP-----YNKCMNFL--------NDTQRSAALMMG--DELHNKF 292
QR AA + GS P +KC++FL + +A+LM+G DE H KF
Sbjct: 288 -QRLGPAAFPYSPTGSLPGSPSAASKCLSFLLQQQQQQHDRAAAAASLMLGGGDEAH-KF 345
Query: 293 GTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMF 352
R +R DF MNP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMF
Sbjct: 346 MARPRLDRADFASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMF 405
Query: 353 GFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSAC 412
GFVTFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +K ++Q Q G++ S C
Sbjct: 406 GFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQQ-----GDF-SGC 459
Query: 413 SSPSG------PFDFH-FGGRMLYN----NQEMLRRKLEEQ---ADLQQAIEMQGRRLMN 458
++P+G PFD H G RML + N+ +LRRKLEEQ A+LQ AIE+Q RRLM
Sbjct: 460 TTPTGGLDARDPFDLHQLGARMLQHSNSANELLLRRKLEEQQQAAELQHAIELQSRRLMG 519
Query: 459 LQ-LHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPV 517
LQ L LK +P+P N P E P E
Sbjct: 520 LQLLDLKARAAATASA--------LPTPIA----NAFASSHPLSTMAVESPLESG----- 562
Query: 518 TDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCD---SLEHILPDNLFAS 574
+ +S + +G DKEE D D S EH LPD+ FAS
Sbjct: 563 -----------EQLKLSSGFALDGKLNGGDKEESACEASPDAADSDQSGEHNLPDSPFAS 611
Query: 575 PKKSAGGHITVFSSASAEVDEKNTSSVTST--NNNTKLPSTSLNMSSLNSCLLQMSRFSS 632
P KSA V S +A E S V S + L +L + S +S M R SS
Sbjct: 612 PTKSAA---LVHDSFAATEPENTASCVGSKIDGGSNHLRPPALEIPSPSSYFFPMRRLSS 668
Query: 633 GQGTIGM 639
G +GM
Sbjct: 669 DHGAMGM 675
>gi|242051314|ref|XP_002463401.1| hypothetical protein SORBIDRAFT_02g043180 [Sorghum bicolor]
gi|241926778|gb|EER99922.1| hypothetical protein SORBIDRAFT_02g043180 [Sorghum bicolor]
Length = 702
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 299/744 (40%), Positives = 383/744 (51%), Gaps = 147/744 (19%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG+LLIQD+G+KEMIRLAFGPE LLH ++ KA+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 LS----------------------------NASASASASATNPSSLSPSSAPWLPPASLS 92
L + A A S + W PP S
Sbjct: 61 LGLLPPPAPGSGPGTPTSAAHSPFLLSRQNSGRCGAGAGTAPSPLSVSSPSSWAPPPVFS 120
Query: 93 YANVVNGSSCSSTNAAASASESLYYSNISNNNS-----YASSDIADDFHQFQDHLSFL-- 145
+N V + + A +A S + N+ +A+ D D Q Q+ L+FL
Sbjct: 121 RSNSVISNGAVAEEALTAAVGDDLMSPAAGGNAPPSPFFAAGDPLLDELQLQEQLAFLND 180
Query: 146 ----------DESSELASSTDADHHNHHHLLKRSLSLPVHPN---------VCFGSDDDP 186
D +SE S D + P +C G D
Sbjct: 181 AAAGHQLPLFDAASECRSPGAGDATGFFPYGGLGWANGGGPGHRRSSSVSELCLGGAD-- 238
Query: 187 NSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELS-QELLLRS 245
GLGWK CLY+A+G+CKNG+AC+F H P+ ATA + G+ + E Q++LLRS
Sbjct: 239 --GLGWKPCLYYARGYCKNGSACRFVHGGLPDDATA--LAGAKMDTATLEQQCQDILLRS 294
Query: 246 KASVQQRKLAAASQF--MGSFP-----YNKCMNFL-----NDTQR-----SAALMMGDEL 288
K+ QR AAA + GS P KC++ L N+ +R +AALM+G +
Sbjct: 295 KS---QRLAAAAFPYSPTGSLPGSPSAATKCLSLLLQQQQNENRRHAAAAAAALMLGGDD 351
Query: 289 HNKFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQ 348
+KF R +R D MNP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQ
Sbjct: 352 AHKFLGRPRLDRADLASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQ 411
Query: 349 KRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEY 408
KRMFGFVTFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +K ++Q Q Q ER ++
Sbjct: 412 KRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQ-QLQGERVDF 470
Query: 409 SSACSSPSGPFDFH-FGGRMLYN----NQEMLRRK----LEEQADLQQAIEMQGRRLMNL 459
S+ + FD H G RML + N+ +LRRK ++ A+LQQA+E+Q RRLM L
Sbjct: 471 SNGLDA-RDHFDLHQLGARMLQHSHSANEMLLRRKLEEQQQQAAELQQAMELQSRRLMGL 529
Query: 460 Q-LHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVT 518
Q L LK S+ SPI P SP + E PP+ P
Sbjct: 530 QLLDLKTR----------SSPSPIGMP---FSPTRAV-----ASATVESPPDSGEHGPKG 571
Query: 519 DSQITDHLFHREENRTSNHNKNNNSDGNDKEE-----KPNSDENDLCDSLEHILPDNLFA 573
S L R E N G DKEE PN+D + S EH LPD+ FA
Sbjct: 572 SSGF--FLPQRGERPAVN--------GGDKEESAGDASPNADGD---QSAEHNLPDSPFA 618
Query: 574 SP-KKSAGGHIT----------VFSSASAEVDEKNT-SSVTSTNNNTKLPS----TSLNM 617
SP KKSA + + ++A+A T +S NN L ++L++
Sbjct: 619 SPTKKSAAAAFSRDPFAPSDSEIAATAAASPGRNATAASFAGINNGGGLTGHLRPSALDI 678
Query: 618 SSLNSCLLQMSRFSS--GQGTIGM 639
S MSR SS G G IGM
Sbjct: 679 PSPKPYFFPMSRLSSDHGAGAIGM 702
>gi|115452805|ref|NP_001050003.1| Os03g0329200 [Oryza sativa Japonica Group]
gi|122247068|sp|Q10LZ9.1|C3H23_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 23;
Short=OsC3H23
gi|108707944|gb|ABF95739.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108707945|gb|ABF95740.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548474|dbj|BAF11917.1| Os03g0329200 [Oryza sativa Japonica Group]
Length = 677
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 292/722 (40%), Positives = 380/722 (52%), Gaps = 128/722 (17%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG LLIQD+GDKEMIRLAFGPE LLH+++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LS--NASASASASATNPSSLSP--------SSAPWLPPASLSYANVVNGSSCSSTNAAA- 109
L+ +AS+S T P++ SP P P+S + A + S+ AA
Sbjct: 61 LALLPPPQAASSSPTVPAAHSPFLLSRQNSGRCPAPSPSSWAQAQPFSRSNSMGNGGAAD 120
Query: 110 ---SASESLYYSNISNNNSY---------ASSDIADDFHQFQDHLSFLDESS-------- 149
A E L + + DDF + Q+ L+FL + +
Sbjct: 121 EMVGAGEELMSPLNGGGGAAANAPPFFPRGGDALLDDF-ELQEQLAFLHDGAGGVNPGHA 179
Query: 150 ----ELASSTDADHHNHHHLLKRSLSL----PVHPN------VCFGSDDDPNSGLGWKHC 195
+ A +L L+ P H +C G D G GWK C
Sbjct: 180 LQAFDGAECRSPGPGESGGMLPYGLAWANGGPGHRRSASVNELCLGGD-----GFGWKPC 234
Query: 196 LYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQRKLA 255
LY+A+GFCKNG+ C+F H + A A +E + Q+ LLRSK+ QR
Sbjct: 235 LYYARGFCKNGSTCRFVHGGLSDDAAMDATT------AEQQQCQDFLLRSKS---QRLGP 285
Query: 256 AASQFM--GSFP-----YNKCMNFL-------NDTQRSAALMM----GDELHNKFGTCSR 297
AA F GS P +KC++ L ND QR+AA + GDE H KF R
Sbjct: 286 AAFPFTPTGSLPASPSATSKCLSLLLQQQQQHNDNQRAAAAALMLAGGDEAH-KFMGRPR 344
Query: 298 PERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTF 357
+R DF MNP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTF
Sbjct: 345 LDRVDFASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTF 404
Query: 358 VYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSG 417
VYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +K ++Q Q G++ C SP+G
Sbjct: 405 VYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQQ-----GDF--CCMSPTG 457
Query: 418 -----PFDFH-FGGRMLYN----NQEMLRRK---LEEQADLQQAIEMQGRRLMNLQ-LHL 463
PFDFH G RML + N+ MLRRK ++ A+LQQAI++ RRL+ LQ L L
Sbjct: 458 LDARDPFDFHQLGARMLQHSNSANELMLRRKLEEQQQAAELQQAIDLHSRRLIGLQLLDL 517
Query: 464 KNNHLNHQFH-HGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQI 522
K++ H +S +PI + S P T + E PP +G Q+
Sbjct: 518 KSSAAVHAAETTTMSLPTPITNAFTSGQPGATTIV--------ESPPSSTG-------QL 562
Query: 523 TDHLFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSAGGH 582
E + N +S G E N+D + S EH LPD+ FAS KS
Sbjct: 563 MASCGSPSEGKVVNGGNKADSAG---EVTRNADSD---QSGEHNLPDSPFASSTKSTAFF 616
Query: 583 ITVFSSA-SAEVDEKNTSSV----TSTNNNTKLPSTSLNMSSLNSCLLQMSRFSSGQGTI 637
++A +E D SS ++ + L +L++ S +C M R S G I
Sbjct: 617 TATAATAIGSEGDFTTGSSCNIGGSAVGSANPLRPPTLDIPSPRTCFFPMPRLSE-HGAI 675
Query: 638 GM 639
GM
Sbjct: 676 GM 677
>gi|224114163|ref|XP_002332416.1| predicted protein [Populus trichocarpa]
gi|222832369|gb|EEE70846.1| predicted protein [Populus trichocarpa]
Length = 598
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 222/413 (53%), Positives = 268/413 (64%), Gaps = 79/413 (19%)
Query: 74 NPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNISNNNSYASSDIAD 133
N SSL+P+SAP+ YAN V G SD+ D
Sbjct: 133 NGSSLNPASAPF-------YANGVRGG--------------------------GESDLMD 159
Query: 134 DFHQFQDHLSFL-DESSELASSTDADHHNHHHLLKR------SLSLP------VHPNVCF 180
+F Q QD LSFL D S+ L + ++ L S+ P VH C
Sbjct: 160 EF-QLQDQLSFLNDNSANLGPKSSDLFYSQLDALSSPTGASDSVMFPSYWGGSVHRRSCS 218
Query: 181 GSD----DDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFE 236
SD +DPNSG GW+ CLYFA+G+CKNG+ C+F H E+ A +VGSP+ ++ +
Sbjct: 219 VSDVLGSEDPNSGFGWRPCLYFARGYCKNGSNCRFVHGGLGESDGAGVVVGSPNGNNKID 278
Query: 237 LSQEL--LLRSKASVQQRKLAAASQFMG----SFPYN-KCMNFL-----NDTQRSAA-LM 283
+ + LLRSK S QQ++LAAASQ MG SFPY+ K MNFL ND+QR+AA LM
Sbjct: 279 MMDQCHELLRSK-SAQQQRLAAASQLMGGSAASFPYSPKSMNFLLQQQQNDSQRAAAALM 337
Query: 284 MGDELHNKFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVR 343
MG+++H KF SR +RND +NP++RQIYLTFPADSTFREEDVSNYFSIYGPV DVR
Sbjct: 338 MGEDMH-KFAR-SRLDRNDL---INPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVR 392
Query: 344 IPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQM 403
IPYQQKRMFGFVTF+YPETVK+ILAKGNPHFVCD+RVLVKPYKEKGKV +KKQQ QQQ+
Sbjct: 393 IPYQQKRMFGFVTFLYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQ--QQQV 450
Query: 404 ERGEYSSACSSPSG-----PFDFHFGGRMLYNNQEML-RRKLEEQADLQQAIE 450
ERGE+ S C +P+G PFD G RM YN Q+ML RRKLEEQADLQQA+E
Sbjct: 451 ERGEF-SPCGTPTGLDSRDPFDLQLGARMFYNTQDMLWRRKLEEQADLQQALE 502
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 555 DENDLCDSLEHILPDNLFASPKKSAGGHITVFSSASAEVD-EKNTSSVTSTNNNTKL--- 610
++ DL +LEH LPD+ FASP K +G + + F ++ EK+ + S++ N L
Sbjct: 493 EQADLQQALEHNLPDSPFASPTKGSGDYYSAFIHGVPDLSHEKDANIPASSSANNSLVTT 552
Query: 611 ----PSTSLNMSSLNSCLLQMSRFSSGQGTIGM 639
P++SL M+S S QM RFSSG G IGM
Sbjct: 553 SLISPNSSLEMASFKSFNCQMPRFSSGHGAIGM 585
>gi|226507390|ref|NP_001152488.1| nucleic acid binding protein [Zea mays]
gi|195656755|gb|ACG47845.1| nucleic acid binding protein [Zea mays]
Length = 653
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 278/725 (38%), Positives = 364/725 (50%), Gaps = 158/725 (21%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG+LLIQD+G+KEMIRLAFGPE LLH ++ KA+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 LS-------NASASASASAT-NPSSLSPSSAPWLPPAS------------------LSYA 94
L S +A+AT +P LS ++ + S
Sbjct: 61 LGLLPSPGPGTPTSVTAAATHSPFLLSRQNSGRCGAGTAPSPLSVSSPSSWAPPPHFSRT 120
Query: 95 NVVNGSSCSSTNAAASASESLYYSNISNNNSYASSDIADDFHQFQDHLSFLDES------ 148
N V + + AA N + +A+ + D Q Q+ L+FL ++
Sbjct: 121 NSVVSNGAPAEALAADLMSPAAAGNAPPSPFFAAGEPLLDELQLQEQLAFLSDAAAGGHQ 180
Query: 149 ------SELAS--STDADHHNHHHLLKRSLSLPVH------PNVCFGSDDDPNSGLGWKH 194
SE S S DA + L + P H +C G D GLGWK
Sbjct: 181 LPLFDASECRSPGSGDAAGFFPYGALGWANGGPGHRRSSSVSELCLGGAD----GLGWKP 236
Query: 195 CLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQE---LLLRSKASVQQ 251
CLY+A+G+CKNG+AC+F H + ATA K+ L Q+ +LLRSK+ Q
Sbjct: 237 CLYYARGYCKNGSACRFVHGGLTDDATA--------KMDTATLEQQCQDILLRSKS---Q 285
Query: 252 RKLAAASQFMGSFP-----YNKCMNFL-------------NDTQRSAALMMGDELHNKFG 293
R A GS P KC++ L +AALM+G + +KF
Sbjct: 286 RLAAFPYSPTGSVPGSPSAATKCLSLLLHQQQQQNENQRVAAAAAAAALMLGGDDAHKFI 345
Query: 294 TCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFG 353
R +R D +NP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFG
Sbjct: 346 GRPRLDRADLASLVNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFG 405
Query: 354 FVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGE--YSSA 411
FVTFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +K ++Q Q Q ER +S+
Sbjct: 406 FVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQ-QLQGERAVDFFSNG 464
Query: 412 CSSPSGPFDFH-FGGRMLYN----NQEMLRRKLEEQADLQQAIEMQGRRLMNLQ-LHLKN 465
D H G RML + N+ +LRRKLEEQ QQA+E+Q RRLM LQ L LK
Sbjct: 465 LDGRENHLDLHQLGARMLQHSHSANEMLLRRKLEEQ---QQAMELQSRRLMGLQLLDLK- 520
Query: 466 NHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQITDH 525
SP P + P R + PP+
Sbjct: 521 -----------PRASPSPIGNMPLGPTQRA---------VDSPPDSG------------- 547
Query: 526 LFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSAGGHITV 585
REE+ + + N +S+ S EH LPD+ FASP +SA
Sbjct: 548 ---REESSAGDASPNADSE----------------QSAEHNLPDSPFASPTRSAALARDP 588
Query: 586 FSSASAEV-----DEKNTSSVTSTNNNTKLPSTSLNMSSLNS----CLLQMSRFSS--GQ 634
F++ E+ S ++++ + + L S+L+ + M+R SS G
Sbjct: 589 FAAIDGEMAASPGRRNGAGSFAGISSSSGVLAGHLRPSALDIPSPFFPMSMTRLSSDHGA 648
Query: 635 GTIGM 639
G IGM
Sbjct: 649 GAIGM 653
>gi|218192753|gb|EEC75180.1| hypothetical protein OsI_11407 [Oryza sativa Indica Group]
Length = 677
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 290/722 (40%), Positives = 378/722 (52%), Gaps = 128/722 (17%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG LLIQD+GDKEMIRLAFGPE LLH+++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LS--NASASASASATNPSSLSP--------SSAPWLPPASLSYANVVNGSSCSSTNAAA- 109
L+ +AS+S T P++ SP P P+S + A + S+ AA
Sbjct: 61 LALLPPPQAASSSPTVPAAHSPFLLSRQNSGRCPAPSPSSWAQAQPFSRSNSMGNGGAAD 120
Query: 110 ---SASESLYYSNISNNNSY---------ASSDIADDFHQFQDHLSFLDESS-------- 149
A E L + + DDF + Q+ L+FL + +
Sbjct: 121 EMVGAGEELMSPLNGGGGAAANAPPFFPRGGDALLDDF-ELQEQLAFLHDGAGGVNPGHA 179
Query: 150 ----ELASSTDADHHNHHHLLKRSLSL----PVHPN------VCFGSDDDPNSGLGWKHC 195
+ A +L L+ P H +C G D G GWK C
Sbjct: 180 LQAFDGAECRSPGPGESGGMLPYGLAWANGGPGHRRSASVNELCLGGD-----GFGWKPC 234
Query: 196 LYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQRKLA 255
LY+A+GFCKNG+ C+F H + + +E + Q+ LLRSK+ QR
Sbjct: 235 LYYARGFCKNGSTCRFVH------GGLSDDAAMDAATAEQQQCQDFLLRSKS---QRLGP 285
Query: 256 AASQFM--GSFP-----YNKCMNFL-------NDTQRSAALMM----GDELHNKFGTCSR 297
AA F GS P +KC++ L ND QR+AA + GDE H KF R
Sbjct: 286 AAFPFTPTGSLPASPSATSKCLSLLLQQQQQHNDNQRAAAAALMLAGGDEAH-KFMGRPR 344
Query: 298 PERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTF 357
+R DF MNP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTF
Sbjct: 345 LDRVDFASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTF 404
Query: 358 VYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSG 417
VYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +K ++Q Q G++ C SP+G
Sbjct: 405 VYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQQ-----GDF--CCMSPTG 457
Query: 418 -----PFDFH-FGGRMLYN----NQEMLRRK---LEEQADLQQAIEMQGRRLMNLQ-LHL 463
PFDFH G RML + N+ MLRRK ++ A+LQQAI++ RRL+ LQ L L
Sbjct: 458 LDARDPFDFHQLGARMLQHSNSANELMLRRKLEEQQQAAELQQAIDLHSRRLIGLQLLDL 517
Query: 464 KNNHLNHQFH-HGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQI 522
K++ H +S +PI + S P T + E PP +G Q+
Sbjct: 518 KSSAAVHAAETTTMSLPTPITNAFTSGQPGATTIV--------ESPPSSTG-------QL 562
Query: 523 TDHLFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSAGGH 582
E + N +S G E N+D + S EH LPD+ FAS KS
Sbjct: 563 MASCGSPSEGKVVNGGNKADSAG---EVTRNADSD---QSGEHNLPDSPFASSTKSTAFS 616
Query: 583 ITVFSSA-SAEVDEKNTSSV----TSTNNNTKLPSTSLNMSSLNSCLLQMSRFSSGQGTI 637
++A +E D SS ++ L +L++ S +C M R S G I
Sbjct: 617 TATAATAIGSEGDFTTGSSCNIGGSAVGGANPLRPPTLDIPSPRTCFFPMPRLSE-HGAI 675
Query: 638 GM 639
GM
Sbjct: 676 GM 677
>gi|357119900|ref|XP_003561671.1| PREDICTED: zinc finger CCCH domain-containing protein 22-like
[Brachypodium distachyon]
Length = 673
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 282/729 (38%), Positives = 374/729 (51%), Gaps = 146/729 (20%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP+ A+KIMG L+IQD+G+KEMIRLAFGPE+LL ++ KA+
Sbjct: 1 MDAYEATKVVFSRIQALDPDEAAKIMGLLIIQDHGEKEMIRLAFGPESLLQTVMAKARRE 60
Query: 61 LSNASA---------------------SASASATNPSSLSPSSAPWLPPASLSYANVVNG 99
L SA S A + S + W S N V
Sbjct: 61 LGLLSASSSPTSAPRPQSPFQQLSRQNSGRAPPSPSPLSVSSPSSWAQAPVFSRNNGV-- 118
Query: 100 SSCSSTNAAASASESLYYSNISNNNSYAS-----SDIADDFHQFQDHLSFLDESS----- 149
+ + A + + L + NN + AS D D Q Q+ L+FL++
Sbjct: 119 ---APEDVAGAGEQELM--SPGNNGAAASFFPRAGDALVDDLQLQEQLAFLNDGGGATMN 173
Query: 150 ---ELASSTDADH------HNHHHLLKRSLSL-PVH-----PNVCFGSDDDPNSGLGWKH 194
+L + D + + L P H N F D+ LGWK
Sbjct: 174 HAHQLGGTFDGGDCRSPGPGDGSGMFPYGLGWAPGHRRSASANELFLGDNS----LGWKP 229
Query: 195 CLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQRKL 254
CLY+A+GFCKNG++C+F H A+ + +P + + + LLR K+ ++L
Sbjct: 230 CLYYARGFCKNGSSCRFVH-----GASLQDVDDAPVAEQQQQQCHDFLLRYKS----QRL 280
Query: 255 AAASQFMGSFPY-------------NKCMNFL-----NDTQR----SAALMM--GDELHN 290
S FPY +KC++FL ND QR +AA+++ GDE H
Sbjct: 281 GHPSH---GFPYSPTGSLPGSPSSASKCLSFLMQQQHNDNQRYLLAAAAMILGGGDEAH- 336
Query: 291 KFGTCSRPERNDFFGSM-NPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQK 349
KF R +R D M NP +RQIYLTFPADSTFREEDVS YF +YGPVHDVRIPYQQK
Sbjct: 337 KFMGRPRLDRTDLASMMNNPGSRQIYLTFPADSTFREEDVSGYFRMYGPVHDVRIPYQQK 396
Query: 350 RMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYS 409
RMFGFVTFV PETV+LILAKGNPHF+CD+RVLVKPYKEKGKV +K ++Q QQ G++
Sbjct: 397 RMFGFVTFVLPETVRLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQQQ----GDF- 451
Query: 410 SACSSPSG------PFDFH-FGGRMLYN----NQEMLRRKLEEQ---ADLQQAIEMQGRR 455
S C++P+G PFD H G RM + N+ M+RRK EE A+ Q A+E+Q RR
Sbjct: 452 SGCTTPNGLDGRADPFDLHQIGARMPQHSNSANEMMMRRKQEEDQQAAEFQHAVELQSRR 511
Query: 456 LMNLQ-LHLKNNHLNHQFHHGLSNGSPIPSP-TLSHSPNNRTRIF-PFEGSDEEVPPEES 512
LM LQ L LK+ P+ + T S P T + P E S+E++
Sbjct: 512 LMGLQLLDLKSRAAAAATAGMALPTMPMANAFTASQQPGETTVVASPLE-SNEQI----K 566
Query: 513 GVSPVTDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLF 572
G S +F E N + ++ K +SDE+ EH LP+ F
Sbjct: 567 GSS----------VFAAESNAAPKEGVDKVESADEANHKTDSDESARG---EHNLPERPF 613
Query: 573 ASPKKSA--GGHITVFSSASAEVDEKNTSSVTSTNNNTKLPSTSLNMSSLNSCLLQMSRF 630
ASP KS+ G H FS+ +A ++ T N LPS +L+M S L MSR
Sbjct: 614 ASPTKSSTTGSH-DGFSATTATMN-------TGGGTNHLLPS-ALDMPSPRPYFLPMSRL 664
Query: 631 SSGQGTIGM 639
SS G IGM
Sbjct: 665 SSDHGAIGM 673
>gi|15231090|ref|NP_190763.1| zinc finger CCCH domain-containing protein 46 [Arabidopsis
thaliana]
gi|79314761|ref|NP_001030840.1| zinc finger CCCH domain-containing protein 46 [Arabidopsis
thaliana]
gi|75337705|sp|Q9SV09.1|C3H46_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 46;
Short=AtC3H46
gi|4678924|emb|CAB41315.1| putative protein [Arabidopsis thaliana]
gi|23297746|gb|AAN13016.1| unknown protein [Arabidopsis thaliana]
gi|222422911|dbj|BAH19442.1| AT3G51950 [Arabidopsis thaliana]
gi|332645345|gb|AEE78866.1| zinc finger CCCH domain-containing protein 46 [Arabidopsis
thaliana]
gi|332645346|gb|AEE78867.1| zinc finger CCCH domain-containing protein 46 [Arabidopsis
thaliana]
Length = 540
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 278/649 (42%), Positives = 347/649 (53%), Gaps = 132/649 (20%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD YEAT++V SRI+++DPENASKIMG LL+QD+G+KEMIRLAFGPETL+H++I KAK
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 61 LSNASASASASATNPSSLSPSS--APWLPPASLSYANVVNGSSCSSTNAAASASESLYYS 118
L + S S + +SP + L PASL + Y+
Sbjct: 61 LGLMNCSRSPWSHQDELISPKNNRGSSLNPASLPF-----------------------YA 97
Query: 119 NISNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNV 178
N +S D+ +DF D S S++ S A RS S V +
Sbjct: 98 N----GGRSSRDLTNDFELMDDMNS---RSTDFLGSVHA----------RSGSC-VLDGL 139
Query: 179 CFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELS 238
+G D D G G C YFA+GFCKNG +C+F H + A +VGSPS++
Sbjct: 140 GYGGDSD--LGFGGVPCSYFARGFCKNGASCRFVH-----SDGGADLVGSPSRIE----- 187
Query: 239 QELLLRSKASVQQRKLAAASQFM--GSFPY--NKCMNFL-NDTQRSAA-LMMGDELHNKF 292
LLRS SV R A FM S P K +N ND QR+AA LM+GDEL K
Sbjct: 188 ---LLRSN-SVPPR---LAHHFMTRSSLPSFSTKGVNLQQNDVQRAAAALMIGDELQ-KL 239
Query: 293 GTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMF 352
G RPER D P++RQIYLTFPADS FREEDVSNYFS +GPV DVRIPYQQKRMF
Sbjct: 240 GRW-RPERIDLSAMACPASRQIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRMF 298
Query: 353 GFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSAC 412
GFVTFVYPETVK ILAKGNPHFVCDSRVLVKPYKEKGKV +K + + E S
Sbjct: 299 GFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKVPDKYRTNQTTEREL----SPT 354
Query: 413 SSPSGPFDFHFGGRMLYNNQE--MLRRKLEEQADLQQAIEMQGRRLMNLQLHLKNNHLNH 470
S P D GGR YNN + + R K EE + +E+Q RRLMNLQL L+
Sbjct: 355 GLDSSPRDV-LGGRGFYNNTQDVLWRSKFEE-----EILELQSRRLMNLQL------LDV 402
Query: 471 QFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQITDHLFHRE 530
+ H L+ SPT HSPN PF +S +SP S I +
Sbjct: 403 KKHFQLN------SPTNIHSPN------PF---------SQSLISPRPLSVI------KR 435
Query: 531 ENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSAGGHITVFSSAS 590
E K ++ +G+D D +L + LE LPD+ FASP H+ +F+ S
Sbjct: 436 EYDGGEKGKGSSKEGSD------DDTMNLPERLEDSLPDSPFASPAH----HLLLFAD-S 484
Query: 591 AEVDEKNTSSVTSTNNNTKLPSTSLNMSSLNSCLLQMSRFSSGQGTIGM 639
A+ + + S +S N++ PST + S NS QM R + IGM
Sbjct: 485 ADNNGSDLWSPSSDNDDNSTPSTLSD--SFNSFNYQMPRLPA----IGM 527
>gi|21594547|gb|AAM66020.1| unknown [Arabidopsis thaliana]
Length = 540
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 278/649 (42%), Positives = 347/649 (53%), Gaps = 132/649 (20%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD YEAT++V SRI+++DPENASKIMG LL+QD+G+KEMIRLAFGPETL+H++I KAK
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 61 LSNASASASASATNPSSLSPSS--APWLPPASLSYANVVNGSSCSSTNAAASASESLYYS 118
L + S S + +SP + L PASL + Y+
Sbjct: 61 LGLMNCSRSPWSHQDELISPKNNRGSSLNPASLPF-----------------------YA 97
Query: 119 NISNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNV 178
N +S D+ +DF D S S++ S A RS S V +
Sbjct: 98 N----GGRSSRDLTNDFELMDDMNS---RSTDFLGSVHA----------RSGSC-VLDGL 139
Query: 179 CFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELS 238
+G D D G G C YFA+GFCKNG +C+F H + A +VGSPS++
Sbjct: 140 GYGGDSD--LGFGGVPCSYFARGFCKNGASCRFVH-----SDGGADLVGSPSRID----- 187
Query: 239 QELLLRSKASVQQRKLAAASQFM--GSFPY--NKCMNFL-NDTQRSAA-LMMGDELHNKF 292
LLRS SV R A FM S P K +N ND QR+AA LM+GDEL K
Sbjct: 188 ---LLRSN-SVPPR---LAHHFMTRSSLPSFSPKGVNLQQNDVQRAAAALMIGDELQ-KL 239
Query: 293 GTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMF 352
G RPER D P++RQIYLTFPADS FREEDVSNYFS +GPV DVRIPYQQKRMF
Sbjct: 240 GRW-RPERIDLSAMACPASRQIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRMF 298
Query: 353 GFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSAC 412
GFVTFVYPETVK ILAKGNPHFVCDSRVLVKPYKEKGKV +K + + E S
Sbjct: 299 GFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKVPDKYRTNQTTEREL----SPT 354
Query: 413 SSPSGPFDFHFGGRMLYNNQE--MLRRKLEEQADLQQAIEMQGRRLMNLQLHLKNNHLNH 470
S P D GGR YNN + + R K EE + +E+Q RRLMNLQL L+
Sbjct: 355 GLDSSPRDV-LGGRGFYNNTQDVLWRSKFEE-----EILELQSRRLMNLQL------LDV 402
Query: 471 QFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQITDHLFHRE 530
+ H L+ SPT HSPN PF +S +SP S I +
Sbjct: 403 KKHFQLN------SPTNIHSPN------PF---------SQSLISPRPLSVI------KR 435
Query: 531 ENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSAGGHITVFSSAS 590
E K ++ +G+D D +L + LE LPD+ FASP H+ +F+ S
Sbjct: 436 EYDGGEKGKGSSKEGSD------DDTMNLPERLEDSLPDSPFASPAH----HLLLFAD-S 484
Query: 591 AEVDEKNTSSVTSTNNNTKLPSTSLNMSSLNSCLLQMSRFSSGQGTIGM 639
A+ + + S +S N++ PST + S NS QM R + IGM
Sbjct: 485 ADNNGSDLWSPSSDNDDNSTPSTLSD--SFNSFNYQMPRLPA----IGM 527
>gi|19423979|gb|AAL87320.1| unknown protein [Arabidopsis thaliana]
Length = 540
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 278/649 (42%), Positives = 346/649 (53%), Gaps = 132/649 (20%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD YEAT++V SRI+++DPENASKIMG LL+QD+G+KEMIRLAFGPETL+H++I KAK
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 61 LSNASASASASATNPSSLSPSS--APWLPPASLSYANVVNGSSCSSTNAAASASESLYYS 118
L + S S + +SP + L PASL + Y+
Sbjct: 61 LGLMNCSRSPWSHQDELISPKNNRGSSLNPASLPF-----------------------YA 97
Query: 119 NISNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNV 178
N +S D+ +DF D S S++ S A RS S V +
Sbjct: 98 N----GGRSSRDLTNDFELMDDMNS---RSTDFLGSVHA----------RSGSC-VLDGL 139
Query: 179 CFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELS 238
+G D D G G C YFA+GFCKNG +C+F H + A +VGSPS++
Sbjct: 140 GYGGDSD--LGFGGVPCSYFARGFCKNGASCRFVH-----SDGGADLVGSPSRIE----- 187
Query: 239 QELLLRSKASVQQRKLAAASQFM--GSFPY--NKCMNFL-NDTQRSAA-LMMGDELHNKF 292
LLRS SV R A FM S P K +N ND QR+AA LM+GDEL K
Sbjct: 188 ---LLRSN-SVPPR---LAHHFMTRSSLPSFSTKGVNLQQNDVQRAAAALMIGDELQ-KL 239
Query: 293 GTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMF 352
G RPER D P++RQIYLTFPADS FREEDVSNYFS +GPV DVRIPYQQKRMF
Sbjct: 240 GRW-RPERIDLSAMACPASRQIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRMF 298
Query: 353 GFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSAC 412
GFVTFVYPETVK ILAKGNPHFVCDSRVLVKPYKEKGKV +K + E S
Sbjct: 299 GFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKVPDKYRTNQTTVREL----SPT 354
Query: 413 SSPSGPFDFHFGGRMLYNNQE--MLRRKLEEQADLQQAIEMQGRRLMNLQLHLKNNHLNH 470
S P D GGR YNN + + R K EE + +E+Q RRLMNLQL L+
Sbjct: 355 GLDSSPRDV-LGGRGFYNNTQDVLWRSKFEE-----EILELQSRRLMNLQL------LDV 402
Query: 471 QFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQITDHLFHRE 530
+ H L+ SPT HSPN PF +S +SP S I +
Sbjct: 403 KKHFQLN------SPTNIHSPN------PF---------SQSLISPRPLSVI------KR 435
Query: 531 ENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSAGGHITVFSSAS 590
E K ++ +G+D D +L + LE LPD+ FASP H+ +F+ S
Sbjct: 436 EYDGGEKGKGSSKEGSD------DDTMNLPERLEDSLPDSPFASPAH----HLLLFAD-S 484
Query: 591 AEVDEKNTSSVTSTNNNTKLPSTSLNMSSLNSCLLQMSRFSSGQGTIGM 639
A+ + + S +S N++ PST + S NS QM R + IGM
Sbjct: 485 ADNNGSDLWSPSSDNDDNSTPSTLSD--SFNSFNYQMPRLPA----IGM 527
>gi|297819906|ref|XP_002877836.1| hypothetical protein ARALYDRAFT_485553 [Arabidopsis lyrata subsp.
lyrata]
gi|297323674|gb|EFH54095.1| hypothetical protein ARALYDRAFT_485553 [Arabidopsis lyrata subsp.
lyrata]
Length = 539
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 276/649 (42%), Positives = 346/649 (53%), Gaps = 133/649 (20%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD YEAT++V SRI+++DPENASKIMG LL+QD+G+KEMIRLAFGPETL+H++I KAK
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 61 LSNASASASASATNPSSLSPSS--APWLPPASLSYANVVNGSSCSSTNAAASASESLYYS 118
L + S S + +SP + L PASL + Y+
Sbjct: 61 LGLMNCSRSPWSHQDELISPKNNRGSSLNPASLPF-----------------------YA 97
Query: 119 NISNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNV 178
N +S D+ +DF D ++ S+ S A RS S V +
Sbjct: 98 N----GGRSSRDLTNDFELMDD----VNSRSDFLGSVHA----------RSGSC-VLDGL 138
Query: 179 CFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELS 238
+G D D G G C YFA+GFCKNG +C+F H + A +VGSPS++
Sbjct: 139 GYGGDSD--LGFGGVPCSYFARGFCKNGASCRFVH-----SDGGADLVGSPSRIE----- 186
Query: 239 QELLLRSKASVQQRKLAAASQFM--GSFPY--NKCMNFL-NDTQRSAA-LMMGDELHNKF 292
LLRS SV R A FM S P K +N ND QR+AA LM+GDEL K
Sbjct: 187 ---LLRSN-SVPPR---LAHHFMTRSSLPSFSPKGVNLQQNDIQRAAAALMIGDELQ-KL 238
Query: 293 GTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMF 352
G RPER D P++RQIYLTFPADS FREEDVSNYFS +GPV DVRIPYQQKRMF
Sbjct: 239 GRW-RPERIDLSAMACPASRQIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRMF 297
Query: 353 GFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSAC 412
GFVTFVYPETVK ILAKGNPHFVCDSRVLVKPYKEKGKV +K + + E S
Sbjct: 298 GFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKVPDKYRTNQTTEREL----SPT 353
Query: 413 SSPSGPFDFHFGGRMLYNNQE--MLRRKLEEQADLQQAIEMQGRRLMNLQLHLKNNHLNH 470
S P D GGR YNN + + R K EE + +E+Q RRLMNLQL L+
Sbjct: 354 GLDSSPRDV-LGGRGFYNNTQDVLWRSKFEE-----EILELQSRRLMNLQL------LDV 401
Query: 471 QFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQITDHLFHRE 530
+ H L+ SPT HSPN PF +S +SP S I +
Sbjct: 402 KKHFQLN------SPTNIHSPN------PF---------SQSLISPGPLSVI------KR 434
Query: 531 ENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSAGGHITVFSSAS 590
E K ++ +G+D D +L + LE LPD+ FASP H+ +F+ S
Sbjct: 435 EYEGGEKGKGSSKEGSD------DDTMNLPERLEDSLPDSPFASPAH----HLLLFAD-S 483
Query: 591 AEVDEKNTSSVTSTNNNTKLPSTSLNMSSLNSCLLQMSRFSSGQGTIGM 639
+ + + S +S N++ PST + S NS QM R + IGM
Sbjct: 484 TDNNGSDLWSPSSDNDDNSTPSTLSD--SFNSFNCQMPRLPA----IGM 526
>gi|414888142|tpg|DAA64156.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 661
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 277/730 (37%), Positives = 364/730 (49%), Gaps = 160/730 (21%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG+LLIQD+G+KEMIRLAFGPE LLH ++ KA+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 LS-------NASASASASAT-NPSSLSPSSAPWLPPAS------------------LSYA 94
L S +A+AT +P LS ++ + S
Sbjct: 61 LGLLPSPGPGTPTSVTAAATHSPFLLSRQNSGRCGAGTAPSPLSVSSPSSWAPPPHFSRT 120
Query: 95 NVVNGSSCSSTNAAASASESLYYSNISNNNSYASSDIADDFHQFQDHLSFLDES------ 148
N V + + AA N + +A+ + D Q Q+ L+FL ++
Sbjct: 121 NSVVSNGAPAEALAADLMSPAAAGNAPPSPFFAAGEPLLDELQLQEQLAFLSDAAAGGHQ 180
Query: 149 ------SELAS--STDADHHNHHHLLKRSLSLPVH------PNVCFGSDDDPNSGLGWKH 194
SE S S DA + L + P H +C G D GLGWK
Sbjct: 181 LPLFDASECRSPGSGDAAGFFPYGALGWANGGPGHRRSSSVSELCLGGAD----GLGWKP 236
Query: 195 CLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQE---LLLRSKASVQQ 251
CLY+A+G+CKNG+AC+F H + ATA K+ L Q+ +LLRSK+ Q
Sbjct: 237 CLYYARGYCKNGSACRFVHGGLTDDATA--------KMDTATLEQQCQDILLRSKS---Q 285
Query: 252 RKLAAASQFMGSFP-----YNKCMNFL-------------NDTQRSAALMMGDELHNKFG 293
R A GS P KC++ L +AALM+G + +KF
Sbjct: 286 RLAAFPYSPTGSVPGSPSAATKCLSLLLHQQQQQNENQRVAAAAAAAALMLGGDDAHKFI 345
Query: 294 TCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFG 353
R +R D +NP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFG
Sbjct: 346 GRPRLDRADLASLVNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFG 405
Query: 354 FVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGE--YSSA 411
FVTFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +K ++Q Q Q ER +S+
Sbjct: 406 FVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQ-QLQGERAVDFFSNG 464
Query: 412 CSSPSGPFDFH-FGGRMLYN----NQEMLRRK-----LEEQADLQQAIEMQGRRLMNLQ- 460
D H G RML + N+ +LRRK A+LQQA+E+Q RRLM LQ
Sbjct: 465 LDGRENHLDLHQLGARMLQHSHSANEMLLRRKLEEQQQAAAAELQQAMELQSRRLMRLQL 524
Query: 461 LHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDS 520
L LK SP P ++ P R + PP+
Sbjct: 525 LDLK------------PRASPSPIGSMPLGPTQRA---------VDSPPDSG-------- 555
Query: 521 QITDHLFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSAG 580
REE+ + + N +SD S EH LPD+ FASP +SA
Sbjct: 556 --------REESSAGDASPNADSD----------------QSAEHNLPDSPFASPTRSAA 591
Query: 581 GHITVFSSASAEV-----DEKNTSSVTSTNNNTKLPSTSLNMSSLNS----CLLQMSRFS 631
F++ E+ S ++++ + + L S+L+ + M+R S
Sbjct: 592 LARDPFAAIDREMAASPGRRNGAGSFAGISSSSGVLAGHLRPSALDIPSPFFPMSMTRLS 651
Query: 632 S--GQGTIGM 639
S G G IGM
Sbjct: 652 SDHGAGAIGM 661
>gi|414888141|tpg|DAA64155.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 652
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 262/659 (39%), Positives = 336/659 (50%), Gaps = 149/659 (22%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG+LLIQD+G+KEMIRLAFGPE LLH ++ KA+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 LS-------NASASASASAT-NPSSLSPSSAPWLPPAS------------------LSYA 94
L S +A+AT +P LS ++ + S
Sbjct: 61 LGLLPSPGPGTPTSVTAAATHSPFLLSRQNSGRCGAGTAPSPLSVSSPSSWAPPPHFSRT 120
Query: 95 NVVNGSSCSSTNAAASASESLYYSNISNNNSYASSDIADDFHQFQDHLSFLDES------ 148
N V + + AA N + +A+ + D Q Q+ L+FL ++
Sbjct: 121 NSVVSNGAPAEALAADLMSPAAAGNAPPSPFFAAGEPLLDELQLQEQLAFLSDAAAGGHQ 180
Query: 149 ------SELAS--STDADHHNHHHLLKRSLSLPVH------PNVCFGSDDDPNSGLGWKH 194
SE S S DA + L + P H +C G D GLGWK
Sbjct: 181 LPLFDASECRSPGSGDAAGFFPYGALGWANGGPGHRRSSSVSELCLGGAD----GLGWKP 236
Query: 195 CLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQE---LLLRSKASVQQ 251
CLY+A+G+CKNG+AC+F H + ATA K+ L Q+ +LLRSK+ Q
Sbjct: 237 CLYYARGYCKNGSACRFVHGGLTDDATA--------KMDTATLEQQCQDILLRSKS---Q 285
Query: 252 RKLAAASQFMGSFP-----YNKCMNFL-------------NDTQRSAALMMGDELHNKFG 293
R A GS P KC++ L +AALM+G + +KF
Sbjct: 286 RLAAFPYSPTGSVPGSPSAATKCLSLLLHQQQQQNENQRVAAAAAAAALMLGGDDAHKFI 345
Query: 294 TCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFG 353
R +R D +NP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFG
Sbjct: 346 GRPRLDRADLASLVNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFG 405
Query: 354 FVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGE--YSSA 411
FVTFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +K ++Q Q Q ER +S+
Sbjct: 406 FVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQ-QLQGERAVDFFSNG 464
Query: 412 CSSPSGPFDFH-FGGRMLYN----NQEMLRRK-----LEEQADLQQAIEMQGRRLMNLQ- 460
D H G RML + N+ +LRRK A+LQQA+E+Q RRLM LQ
Sbjct: 465 LDGRENHLDLHQLGARMLQHSHSANEMLLRRKLEEQQQAAAAELQQAMELQSRRLMRLQL 524
Query: 461 LHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDS 520
L LK SP P ++ P R + PP+
Sbjct: 525 LDLK------------PRASPSPIGSMPLGPTQRA---------VDSPPDSG-------- 555
Query: 521 QITDHLFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSA 579
REE+ + + N +SD S EH LPD+ FASP +SA
Sbjct: 556 --------REESSAGDASPNADSD----------------QSAEHNLPDSPFASPTRSA 590
>gi|413924734|gb|AFW64666.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 633
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 218/509 (42%), Positives = 284/509 (55%), Gaps = 84/509 (16%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD++EATK+VF R++A+DPENASK+MG LLIQDN DKE+IRLAFGPE LLH+ + A+
Sbjct: 1 MDAWEATKVVFDRVRALDPENASKMMGLLLIQDNSDKELIRLAFGPEHLLHSFVATARAE 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L+ AS + P S APW P+ S A G + A+A + Y
Sbjct: 61 LAAKPASPPSPVLGPLQ---SGAPWGLPSPGSGAGGGGGGDHHHHSPFAAADQLGYDGG- 116
Query: 121 SNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNVCF 180
AD F + DE + + A H +RS SL
Sbjct: 117 -----------ADAF--------YADEYDCWSPAGAAGAH------RRSFSL-------- 143
Query: 181 GSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQE 240
D + W+ C+Y+A+G+CKNG++C+F H PE A E + +
Sbjct: 144 ---SDAEAAASWRPCMYYARGYCKNGSSCRFLH-GVPEDDAAE---------REMAVMRA 190
Query: 241 LLLRSKASVQQRKLAAASQFMGSFPYNKCMNFLN-------DTQRSAALMM--GDELHNK 291
L + QQ++L A++ P +TQR+AA M+ G+++H
Sbjct: 191 KALAAAPPTQQQQLMASAYPFSPSPKGGVSLSFLLQQQQQSETQRAAAGMLLGGEDMHRF 250
Query: 292 FGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRM 351
R +R D GS P+ARQIYLTFPADSTF EEDVSNYFS++GPV DVRIPYQQKRM
Sbjct: 251 PVRSPRMDRGDLIGS--PAARQIYLTFPADSTFSEEDVSNYFSMFGPVQDVRIPYQQKRM 308
Query: 352 FGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEK-KQQQHQQQMERGEYSS 410
FGFVTFVY ETVK IL+KGNPHFVCD+RVLVKPYKEKGKV ++ ++ QH G
Sbjct: 309 FGFVTFVYAETVKAILSKGNPHFVCDARVLVKPYKEKGKVPDRFRKLQHTHH--GGAEFV 366
Query: 411 ACSSPSG------PFDF---HFGGRMLYNN-----QEMLRRKLEEQ--ADLQQAIEMQGR 454
C+SP+G P+D G RM+Y N + LRRKLEE+ A+LQQAIE++GR
Sbjct: 367 GCASPTGLLDSRDPYDLQQPQIGSRMMYGNIANQHEAFLRRKLEEEQAAELQQAIELEGR 426
Query: 455 RLMNLQLHLKNNHLNHQFHHGLSNGSPIP 483
R M LQL L + HH L +G+P+P
Sbjct: 427 RFMGLQLL----DLKSRGHHHLGSGAPMP 451
>gi|449533070|ref|XP_004173500.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Cucumis sativus]
Length = 450
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 227/442 (51%), Positives = 281/442 (63%), Gaps = 55/442 (12%)
Query: 242 LLRSKASVQQRKLAAASQFMGS---FPYN-KCMNFL-----NDTQRSAA-------LMMG 285
LLRSK+S QQR LAAASQ M S FPY+ K +NFL ND+QR+AA LMMG
Sbjct: 7 LLRSKSSAQQR-LAAASQLMASANSFPYSPKSINFLLQQQQNDSQRAAAAAAAAAALMMG 65
Query: 286 DELHNKFGTCSRPERNDF-----FGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVH 340
++LH KF SR ERN+F G +NP++RQIYLTFPADSTF+EEDVSNYFS+YGPV
Sbjct: 66 EDLH-KFSRSSRLERNEFSLNGSAGIINPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQ 124
Query: 341 DVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQ 400
DVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCD+RVLVKPYKEKGKV +K ++ Q
Sbjct: 125 DVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKYRK--Q 182
Query: 401 QQMERGEYSSACSSPSG-----PFD-FHFGGRMLYNNQE--MLRRKLEE-QADLQQAIEM 451
QQ++R S C +P+G +D G RM YN+ + + RRKLEE QADL Q +++
Sbjct: 183 QQIDRD--FSPCGTPTGLDSRELYDHLQLGSRMFYNSHQDLLWRRKLEEQQADL-QTLDL 239
Query: 452 QGRRLMNLQ-LHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPN---NRTRIFP---FEGSD 504
Q RRL+NLQ L +K N L H H LS GSPIPSPT HSPN + IFP GS+
Sbjct: 240 QSRRLLNLQLLDVKKNQLPHHHHRALSTGSPIPSPT--HSPNPLFAQNLIFPSIRSSGSN 297
Query: 505 EEVPP-EESGVSPV-TDSQITDHLFHREENRTSNHNKNNNS-----DGNDKEEKPNSDEN 557
E+G +PV T ++ + R + N S +GNDK E+ D++
Sbjct: 298 STSDILRENGATPVRTPPPVSVMASSSDMPRQPSPVDNGASATIGLNGNDK-ERSQIDDS 356
Query: 558 DLCDSLEHILPDNLFASPKKSAGGHITVFSSASAEVDEKNTSSVTSTNNNTKLPSTSLNM 617
DL + EH LPD+ FASP K+ G + T FS +A V E T S ++++ S+
Sbjct: 357 DLLECFEHNLPDSPFASPAKATGDYTTNFSDIAA-VGEAATDSDDASSSILTSTSSLEVA 415
Query: 618 SSLNSCLLQMSRFSSGQGTIGM 639
+S S Q+ RF SG IGM
Sbjct: 416 TSFKSFNCQIPRFPSGHSPIGM 437
>gi|449464832|ref|XP_004150133.1| PREDICTED: zinc finger CCCH domain-containing protein 22-like
[Cucumis sativus]
Length = 482
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 216/475 (45%), Positives = 277/475 (58%), Gaps = 82/475 (17%)
Query: 189 GLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKAS 248
GLGW+ CLY+AKGFCKNG+ C+F HS + A + E + +LLRS +
Sbjct: 53 GLGWRPCLYYAKGFCKNGSGCRF--FHSGDGGRAEIVE---------ECNDVVLLRSNSG 101
Query: 249 VQQRKLAAASQFMGSFPYNKCM--NFL-----NDTQRS-AALMMGDELHN--KFGTCSRP 298
VQQR G FPY+ L N+ +R+ A L MG+E +N +F R
Sbjct: 102 VQQR--MGVGSVNGFFPYSPTTASELLLQQQQNEMRRAVAGLSMGEESNNSGRF----RL 155
Query: 299 ERNDFFGSM--NPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVT 356
ER+DF G NP+ARQIYLTFPA+S F+EEDVS YFSIYGPV DVRIPYQQKRMFGFVT
Sbjct: 156 ERSDFSGGGMGNPAARQIYLTFPAESCFKEEDVSKYFSIYGPVQDVRIPYQQKRMFGFVT 215
Query: 357 FVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPS 416
FVY ETVKLILAKGNPHFVCDSRVLVKPYKEKGKV +K ++ QQQMERG+ S C +P+
Sbjct: 216 FVYAETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPDKFRK--QQQMERGDL-SPCGTPT 272
Query: 417 G-----PFDFHFGGRMLYNNQEML-RRKLEEQADLQQAIEMQGRRLMNLQLHLKNNHLNH 470
G D H G RM YN+Q+ML RRKLEEQADLQQA+E+Q R+M+LQL L+H
Sbjct: 273 GLDSRDLHDLHHGARMYYNSQDMLWRRKLEEQADLQQALELQALRVMSLQLADVRKPLHH 332
Query: 471 QFHHGLSNGSPIPSP-----TLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQITDH 525
H LS SPIPSP TL HS +++ +E+G + + + ++
Sbjct: 333 --HTPLSTCSPIPSPNPFNQTLFHSIPTNSQLL-----------QENGSNHLPEIRVEPQ 379
Query: 526 LFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCD-SLEHILPDNLFASPKKSAGGHIT 584
+ NN D + N E DL + SLEH LPD+ FAS
Sbjct: 380 VM-------------NNFDLTADSDSSNGKETDLQETSLEHNLPDSPFAS---------A 417
Query: 585 VFSSASAEVDEKNTSSVTSTNNNTKLPSTSLNMSSLNSCLLQMSRFSSGQGTIGM 639
++ + E DE + S+ + ++ +P+++L S Q +SSG G IG+
Sbjct: 418 SYTPSVVEADESDASTDNHSAASSFVPTSNLTAPPFKSFNCQ---YSSGHGAIGL 469
>gi|79313317|ref|NP_001030738.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332642940|gb|AEE76461.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 602
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 257/653 (39%), Positives = 360/653 (55%), Gaps = 106/653 (16%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD + T ++F++I+ ++P+ ASKI+GYLL+QD G +++RLA GPETLL ++ KAK+
Sbjct: 1 MDPGDPTSILFTKIRTLEPDFASKIIGYLLLQDLGKTDLMRLALGPETLLQSVCLKAKSA 60
Query: 61 LS--NASASASASATNPSSL------------SPSSAPWLPPASLSYANVVNGSSCSSTN 106
L + +S+++S NP S SP + P S S+A GS S+ N
Sbjct: 61 LGLSSNGSSSASSPLNPISRPINIHRHSLSHSSPGNGFSRNPLSPSFA--TPGSLGSNPN 118
Query: 107 AAAS---ASESLYYSN-ISNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDAD---- 158
+S AS SL+ S+ + +S + D D+ Q ++LSFL+ESS + D
Sbjct: 119 MISSPFQASSSLFASDGAAAGDSTGNGDFLDE-QQLGNYLSFLNESSSKNNDESLDPFGF 177
Query: 159 --HHNHHHLLKRSLSLPVHPNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHS 216
+ HL KRS S + CFGS++ G G+ L+ G S
Sbjct: 178 SADNGDAHLHKRSFSAS---DACFGSEEPGFGGGGYNRFLHGGLG----------DDFDS 224
Query: 217 PEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQRKLAAASQFMGS----FPYNKCMNF 272
P GSP +S QE ++R K + QR+ AA+Q++ + Y K +NF
Sbjct: 225 PGG------FGSPDYVSR---QQEEIVRMK--MAQRQRMAAAQYLAATGSPMSYEKGLNF 273
Query: 273 L---NDTQRSAALMMGDELHNKFGTCSRPERNDFFG---SMNPSARQIYLTFPADSTFRE 326
L + RS A G+E + FG+ R ER++F G N +++QIYLTFPADS+F +
Sbjct: 274 LLHQRNAHRSGAGQFGEEGY-WFGSPGRHERDEFMGMGDKSNSASKQIYLTFPADSSFTD 332
Query: 327 EDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYK 386
EDVSNYF +GPV DVRIPYQQKRMFGFVTF++ ETV++ILA+GNPHF+CDSRVLVKPYK
Sbjct: 333 EDVSNYFGNFGPVQDVRIPYQQKRMFGFVTFLHSETVRIILARGNPHFICDSRVLVKPYK 392
Query: 387 EKGKVQEKK-QQQHQQQMERGEYSSACSSPSGP-----FDFHFGGRMLYNNQEMLRRKLE 440
EKG++ EK+ QQQ QQMERG +S SSPSG FD H RM N QEM+RRK
Sbjct: 393 EKGRILEKRQQQQLLQQMERGNFSPG-SSPSGMDSRDLFDSHLAPRMFSNTQEMMRRK-A 450
Query: 441 EQADLQQAIEMQGRRLMNLQLHLKNNH--LNHQFHHGLSNGSPIP-SPTLSHSPNNR--- 494
EQADLQQAIE Q RR ++LQL ++ L+HQ LS GSP+ SP ++ S R
Sbjct: 451 EQADLQQAIEFQRRRFLSLQLPDMDSESFLHHQ--RSLSIGSPVHFSPRVNQSMLFRSES 508
Query: 495 TRIFPFEGSDEEVPPEESGVSPVTDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPNS 554
T FEG+ + E+ + ++D T H +E S+ NK +
Sbjct: 509 TSDEVFEGNGDSGHQSEATRAFLSD---TGHNISQERGYNSHLNKGQET----------- 554
Query: 555 DENDLCDSLEHILPDNLFASPKKSAGGHITVFSSASAEVDEKNTSSVTSTNNN 607
SLE+ LPD+ FASP K+ + E +++N ++++ T N
Sbjct: 555 -------SLENTLPDSFFASPSKTG-------ETQHPEFEKENCATISVTTEN 593
>gi|11994270|dbj|BAB01453.1| unnamed protein product [Arabidopsis thaliana]
Length = 591
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 253/625 (40%), Positives = 348/625 (55%), Gaps = 99/625 (15%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD + T ++F++I+ ++P+ ASKI+GYLL+QD G +++RLA GPETLL ++ KAK+
Sbjct: 1 MDPGDPTSILFTKIRTLEPDFASKIIGYLLLQDLGKTDLMRLALGPETLLQSVCLKAKSA 60
Query: 61 LS--NASASASASATNPSSL------------SPSSAPWLPPASLSYANVVNGSSCSSTN 106
L + +S+++S NP S SP + P S S+A GS S+ N
Sbjct: 61 LGLSSNGSSSASSPLNPISRPINIHRHSLSHSSPGNGFSRNPLSPSFA--TPGSLGSNPN 118
Query: 107 AAAS---ASESLYYSN-ISNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDAD---- 158
+S AS SL+ S+ + +S + D D+ Q ++LSFL+ESS + D
Sbjct: 119 MISSPFQASSSLFASDGAAAGDSTGNGDFLDE-QQLGNYLSFLNESSSKNNDESLDPFGF 177
Query: 159 --HHNHHHLLKRSLSLPVHPNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHS 216
+ HL KRS S + CFGS++ G G+ L+ G S
Sbjct: 178 SADNGDAHLHKRSFSAS---DACFGSEEPGFGGGGYNRFLHGGLG----------DDFDS 224
Query: 217 PEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQRKLAAASQFMGS----FPYNKCMNF 272
P GSP +S QE ++R K + QR+ AA+Q++ + Y K +NF
Sbjct: 225 PGG------FGSPDYVSR---QQEEIVRMK--MAQRQRMAAAQYLAATGSPMSYEKGLNF 273
Query: 273 L---NDTQRSAALMMGDELHNKFGTCSRPERNDFFG---SMNPSARQIYLTFPADSTFRE 326
L + RS A G+E + FG+ R ER++F G N +++QIYLTFPADS+F +
Sbjct: 274 LLHQRNAHRSGAGQFGEEGY-WFGSPGRHERDEFMGMGDKSNSASKQIYLTFPADSSFTD 332
Query: 327 EDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYK 386
EDVSNYF +GPV DVRIPYQQKRMFGFVTF++ ETV++ILA+GNPHF+CDSRVLVKPYK
Sbjct: 333 EDVSNYFGNFGPVQDVRIPYQQKRMFGFVTFLHSETVRIILARGNPHFICDSRVLVKPYK 392
Query: 387 EKGKVQEKK-QQQHQQQMERGEYSSACSSPSGP-----FDFHFGGRMLYNNQEMLRRKLE 440
EKG++ EK+ QQQ QQMERG +S SSPSG FD H RM N QEM+RRK
Sbjct: 393 EKGRILEKRQQQQLLQQMERGNFSPG-SSPSGMDSRDLFDSHLAPRMFSNTQEMMRRK-A 450
Query: 441 EQADLQQAIEMQGRRLMNLQLHLKNNH--LNHQFHHGLSNGSPIP-SPTLSHSPNNR--- 494
EQADLQQAIE Q RR ++LQL ++ L+HQ LS GSP+ SP ++ S R
Sbjct: 451 EQADLQQAIEFQRRRFLSLQLPDMDSESFLHHQ--RSLSIGSPVHFSPRVNQSMLFRSES 508
Query: 495 TRIFPFEGSDEEVPPEESGVSPVTDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPNS 554
T FEG+ + E+ + ++D T H +E S+ NK +
Sbjct: 509 TSDEVFEGNGDSGHQSEATRAFLSD---TGHNISQERGYNSHLNKGQET----------- 554
Query: 555 DENDLCDSLEHILPDNLFASPKKSA 579
SLE+ LPD+ FASP K+
Sbjct: 555 -------SLENTLPDSFFASPSKTG 572
>gi|414888140|tpg|DAA64154.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 486
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 208/480 (43%), Positives = 266/480 (55%), Gaps = 99/480 (20%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG+LLIQD+G+KEMIRLAFGPE LLH ++ KA+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 LS-------NASASASASAT-NPSSLSPSSAPWLPPAS------------------LSYA 94
L S +A+AT +P LS ++ + S
Sbjct: 61 LGLLPSPGPGTPTSVTAAATHSPFLLSRQNSGRCGAGTAPSPLSVSSPSSWAPPPHFSRT 120
Query: 95 NVVNGSSCSSTNAAASASESLYYSNISNNNSYASSDIADDFHQFQDHLSFLDES------ 148
N V + + AA N + +A+ + D Q Q+ L+FL ++
Sbjct: 121 NSVVSNGAPAEALAADLMSPAAAGNAPPSPFFAAGEPLLDELQLQEQLAFLSDAAAGGHQ 180
Query: 149 ------SELAS--STDADHHNHHHLLKRSLSLPVH------PNVCFGSDDDPNSGLGWKH 194
SE S S DA + L + P H +C G D GLGWK
Sbjct: 181 LPLFDASECRSPGSGDAAGFFPYGALGWANGGPGHRRSSSVSELCLGGAD----GLGWKP 236
Query: 195 CLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQE---LLLRSKASVQQ 251
CLY+A+G+CKNG+AC+F H + ATA K+ L Q+ +LLRSK
Sbjct: 237 CLYYARGYCKNGSACRFVHGGLTDDATA--------KMDTATLEQQCQDILLRSK----- 283
Query: 252 RKLAAASQFMGSFPYN-------------KCMNFL-------------NDTQRSAALMMG 285
SQ + +FPY+ KC++ L +AALM+G
Sbjct: 284 ------SQRLAAFPYSPTGSVPGSPSAATKCLSLLLHQQQQQNENQRVAAAAAAAALMLG 337
Query: 286 DELHNKFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIP 345
+ +KF R +R D +NP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIP
Sbjct: 338 GDDAHKFIGRPRLDRADLASLVNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIP 397
Query: 346 YQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMER 405
YQQKRMFGFVTFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +K ++Q Q Q ER
Sbjct: 398 YQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQ-QLQGER 456
>gi|414882093|tpg|DAA59224.1| TPA: putative RNA-binding zinc finger family protein isoform 1 [Zea
mays]
gi|414882094|tpg|DAA59225.1| TPA: putative RNA-binding zinc finger family protein isoform 2 [Zea
mays]
Length = 629
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 254/700 (36%), Positives = 361/700 (51%), Gaps = 132/700 (18%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD++EATK VF R++A+DP+NASKIMG LLIQDN DKE+IRLAFGP+ LLH + A+
Sbjct: 1 MDAWEATKAVFDRVRALDPDNASKIMGLLLIQDNSDKELIRLAFGPDHLLHAFVSAARAD 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L A+ AS +P L P W P S T + ++ + +++
Sbjct: 61 L----AAKPASPPSPV-LGPLHQTWGAP-----------PHPSPTAGSDHQHQAPFAADL 104
Query: 121 SNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNVCF 180
+ + + D +F + + S A H +RS SL
Sbjct: 105 ALGYDFDGAGAGAD--------AFFPDDYDCWSPAGAAH-------RRSFSL-------- 141
Query: 181 GSDDDPNSGLG----WKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFE 236
SD + + W+ C+YFA+GFCKNG++C+F H PE AAA ++
Sbjct: 142 -SDAEATAAAAGGAAWRPCMYFARGFCKNGSSCRFLHGF-PEDDDAAA----EREMVVMR 195
Query: 237 LSQELLLRSKASVQQRKLAAASQFMGSFPYNKCMNFL-------NDTQRSAA-----LMM 284
++ QQ+ +A+A F S P +NFL N+ QR+AA L
Sbjct: 196 AKALAAAAARPQQQQQLMASAFPFSPSPPKGVNLNFLLHQHQQQNEPQRAAAAAAMLLQG 255
Query: 285 GDELHNKFGTCS-RPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVR 343
GD++H++F S R +R + S P+ARQIYLTFPADSTF EEDVSNYFS+YGPV DVR
Sbjct: 256 GDDMHSRFPVRSPRMDRGELMSS--PAARQIYLTFPADSTFSEEDVSNYFSMYGPVQDVR 313
Query: 344 IPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEK-KQQQHQQQ 402
IPYQQKRMFGFVTFVY ETVK+IL+KGNPHFVCD+RVLVKPYKEKGKV ++ ++ QH
Sbjct: 314 IPYQQKRMFGFVTFVYAETVKIILSKGNPHFVCDARVLVKPYKEKGKVPDRFRKLQHPHH 373
Query: 403 MERGEYSSACSSPSG------PFDF---HFGGRMLYNN----QEMLRRK---LEEQADLQ 446
G++ + C+SP+G PFD G RM+Y N + LRRK ++ A+LQ
Sbjct: 374 ---GDF-AGCTSPTGLLDSRDPFDLQQPQIGPRMMYGNVAGHEAFLRRKLEEQQQAAELQ 429
Query: 447 QAIEMQGRRLMNLQLHLKNNHLNHQFHHGLSNGSPIPSPTL----------SHSPNNRTR 496
QAIE++GRR M L L L H HH S+ + + + TL S + N+
Sbjct: 430 QAIELEGRRFMGLHL-LDLKSRGH--HHLGSSPAAMATTTLGQGDDGCKGRSANGNDNAV 486
Query: 497 IFPFEGSDEEVPPEESGVSPVTDSQITDHLFHREENRTSNHNKNNNSDGNDKEE-KPNSD 555
F E ++ + P + + + S E ++ + DG+ K+ P +
Sbjct: 487 AFHLEDANIQDTPTKMNSNSLAMSGGPAAGAGGEHE---EQQQDGDGDGSPKQAVNPGKE 543
Query: 556 END-----------LC-----DSLEHILPDNLFASPKKSAGGHITVFSSASAEVDEKNTS 599
E C +EHILPD+ FASP K++ + ++ S+A++ +
Sbjct: 544 EKTESGPVTATPIVACGFQESGVVEHILPDSPFASPSKASTQNGSIISNAASSL------ 597
Query: 600 SVTSTNNNTKLPSTSLNMSSLNSCLLQMSRFSSGQGTIGM 639
P++++ + +SC Q RFS G IG+
Sbjct: 598 --------FPPPASTMELPPYSSCFFQAPRFSPGHEAIGL 629
>gi|14586374|emb|CAC42905.1| putative protein [Arabidopsis thaliana]
Length = 574
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 248/648 (38%), Positives = 331/648 (51%), Gaps = 110/648 (16%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MDS +AT L+ ++I++++P+ A KI+G ++ + T
Sbjct: 1 MDSGDATSLLLTKIRSLEPDYAPKIIG-----------------------NSPSSPSSTS 37
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
+ + + + N +SP P P S +N ++ + S +AA A
Sbjct: 38 PWSFNNCINGNNGNNPHISPKHTPISKPFSSHQSNGLSATHSGSADAAGGA--------- 88
Query: 121 SNNNSYASSDIADDFHQFQDHLSFLDESSE-----------LASSTDADHHNHHHLLKRS 169
D+ DD Q D LSFLD+S L S D D H H +RS
Sbjct: 89 ---------DLLDD-QQLNDCLSFLDDSCSKTEDLVDPSIPLDYSVDGDGETHLH--RRS 136
Query: 170 LSLPVHPNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVG-S 228
S + F S DD G G K C+YF++G CKNG +CKF H P+ IV S
Sbjct: 137 FSC----DASFVSGDDGFGG-GCKPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIVADS 191
Query: 229 PSKLSEFELSQELLLRSKASVQQRKLAAASQFMG---SFPYNKCMNFL--NDTQRSAALM 283
P K+ F E ++R K + QQ++LA SQ +G PY K M+FL QR L
Sbjct: 192 PRKMENFVRQHEEMMRLKLAYQQQRLA--SQILGRAPQLPYEKRMDFLLQQHAQRDGGLP 249
Query: 284 MGDELHNKFGTCS--RPERNDFFGSM----NPSARQIYLTFPADSTFREEDVSNYFSIYG 337
GDE +F + S R ER + + N ++RQIYLTFPADSTF++EDV+ YFS++G
Sbjct: 250 FGDE---RFWSSSPGRLERMELAMHLGDQSNSASRQIYLTFPADSTFKDEDVATYFSLFG 306
Query: 338 PVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKK-Q 396
V DVRIPYQQKRMFGFV+F +PETVK++LA+GNPHF+CDSRVLVKPYKEKGKV +KK Q
Sbjct: 307 TVQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLDKKQQ 366
Query: 397 QQHQQQMERGEYSSACSSPSG-----PFDFHFGGRMLYNNQEMLRRKLEEQADLQQAIEM 451
Q QQQ+ERG Y S CSSPSG DFH G +MLY +EM+RRK+ EQADL +AIE+
Sbjct: 367 QLLQQQIERGNY-SPCSSPSGIDPREQSDFHLGSKMLYERREMMRRKI-EQADLLRAIEL 424
Query: 452 QGRRLMNLQLHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEE 511
+ RR +NLQL N + H S GSP F + + P +
Sbjct: 425 ERRRFINLQLPEFKNSVTLNHHRSFSVGSP----------------GYFSSAGNQSPDFQ 468
Query: 512 SGVSPVTDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPNSDE---NDLCDSLEHILP 568
S ++ ++TD N NNS N +E+ N E D ++E +LP
Sbjct: 469 SELNGADALKVTDDTLELHPYPVVNPMSVNNSYSNGAKEETNKSELLDPDSGSTIELVLP 528
Query: 569 DNLFASPKKSAGGHITVFSSASAEVDEKNTSSVTSTNNNTKLPSTSLN 616
NLF S S H T SAE + K V+STN N P + N
Sbjct: 529 SNLFPS-ASSTDDHKT---DDSAETNAK--VGVSSTNENDHEPPVTTN 570
>gi|413955827|gb|AFW88476.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 687
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 218/494 (44%), Positives = 278/494 (56%), Gaps = 85/494 (17%)
Query: 192 WKHCLYFAKGFCKNGTACKFHH--IHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASV 249
WK CLY+A+GFCKNG +C+F H + AA A A + + + + + Q+ L+RSK+
Sbjct: 233 WKPCLYYARGFCKNGGSCRFVHGGLSDDAAAFAGAKMEAAADQQQQQQCQDFLIRSKS-- 290
Query: 250 QQRKLAAASQF--MGSFP-----YNKCMNFL--------NDTQRSAALMMG--DELHNKF 292
QR +AA + GS P +KC++FL + +A+LM+G DE H KF
Sbjct: 291 -QRLGSAAFPYSSTGSLPGSPSAASKCLSFLLQQQQQQHDRAAAAASLMLGGGDEAH-KF 348
Query: 293 GTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMF 352
R +R DF MNP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMF
Sbjct: 349 MGRPRLDRADFANMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMF 408
Query: 353 GFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSAC 412
GFVTFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +K +H + ++G++ S C
Sbjct: 409 GFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKC--RHALKPQQGDF-SGC 465
Query: 413 SSPSG------PFDFH-FGGRMLYN----NQEMLRRKLEEQADLQQAIEMQGRRLMNLQL 461
++P+G PFD H GGRML + N+ +LRRKLEEQ QQAIE+Q RRLM LQL
Sbjct: 466 TTPTGGLDGGYPFDLHQLGGRMLQHSSSANELLLRRKLEEQ---QQAIELQSRRLMGLQL 522
Query: 462 HLKNNHLNHQFHHGLSNGSPIPSPT----LSHSPNNRTRIFPFEGSDEEVPPEESGVSPV 517
L+ + + SP+P+P S P + T + E P ESG
Sbjct: 523 ------LDLKARAAAAAASPLPTPIGDAFASSQPVSTTAV-------ESPSPPESG---- 565
Query: 518 TDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCDS----LEHILPDNLFA 573
+ S +G DKEE D DS EH LPD+ FA
Sbjct: 566 ----------QQLLKLRSGFALEGKVNGGDKEESAREASPDAADSDQSGGEHNLPDSPFA 615
Query: 574 SPKKSAGGHITVFSSASAE--------VDEKNTSSVTSTNNNTKLPSTSLNMSSLNSCLL 625
SP KSA F++ E VD S + +N+ + P +L + S +S
Sbjct: 616 SPTKSAALLHDSFTATETESTAASRVGVDAGVGSKIDGGSNHLRPP--ALEIPSPSSYFF 673
Query: 626 QMSRFSSGQGTIGM 639
M R SS G +GM
Sbjct: 674 PMHRLSSDHGAMGM 687
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 56/62 (90%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG LLIQD+G+KEMIRLAFGPE+LLH ++ KA+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGEKEMIRLAFGPESLLHAVMAKARKD 60
Query: 61 LS 62
L
Sbjct: 61 LG 62
>gi|414882092|tpg|DAA59223.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 630
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 254/699 (36%), Positives = 363/699 (51%), Gaps = 129/699 (18%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD++EATK VF R++A+DP+NASKIMG LLIQDN DKE+IRLAFGP+ LLH + A+
Sbjct: 1 MDAWEATKAVFDRVRALDPDNASKIMGLLLIQDNSDKELIRLAFGPDHLLHAFVSAARAD 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L A+ AS +P L P W P S T + ++ + +++
Sbjct: 61 L----AAKPASPPSPV-LGPLHQTWGAP-----------PHPSPTAGSDHQHQAPFAADL 104
Query: 121 SNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNVCF 180
+ + + D +F + + S A H +RS SL
Sbjct: 105 ALGYDFDGAGAGAD--------AFFPDDYDCWSPAGAAH-------RRSFSL-------- 141
Query: 181 GSDDDPNSGLG----WKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFE 236
SD + + W+ C+YFA+GFCKNG++C+F H PE AAA ++
Sbjct: 142 -SDAEATAAAAGGAAWRPCMYFARGFCKNGSSCRFLHGF-PEDDDAAA----EREMVVMR 195
Query: 237 LSQELLLRSKASVQQRKLAAASQFMGSFPYNKCMNFL-------NDTQRSAA-----LMM 284
++ QQ+ +A+A F S P +NFL N+ QR+AA L
Sbjct: 196 AKALAAAAARPQQQQQLMASAFPFSPSPPKGVNLNFLLHQHQQQNEPQRAAAAAAMLLQG 255
Query: 285 GDELHNKFGTCS-RPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVR 343
GD++H++F S R +R + S P+ARQIYLTFPADSTF EEDVSNYFS+YGPV DVR
Sbjct: 256 GDDMHSRFPVRSPRMDRGELMSS--PAARQIYLTFPADSTFSEEDVSNYFSMYGPVQDVR 313
Query: 344 IPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEK-KQQQHQQQ 402
IPYQQKRMFGFVTFVY ETVK+IL+KGNPHFVCD+RVLVKPYKEKGKV ++ ++ QH
Sbjct: 314 IPYQQKRMFGFVTFVYAETVKIILSKGNPHFVCDARVLVKPYKEKGKVPDRFRKLQHPHH 373
Query: 403 MERGEYSSACSSPSG------PFDF---HFGGRMLYNN----QEMLRRK---LEEQADLQ 446
G++ + C+SP+G PFD G RM+Y N + LRRK ++ A+LQ
Sbjct: 374 ---GDF-AGCTSPTGLLDSRDPFDLQQPQIGPRMMYGNVAGHEAFLRRKLEEQQQAAELQ 429
Query: 447 QAIEMQGRRLMNLQLHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEE 506
QAIE++GRR M L L L H HH S+ + + + TL ++ + G+D
Sbjct: 430 QAIELEGRRFMGLHL-LDLKSRGH--HHLGSSPAAMATTTLGQG-DDGCKGRSANGNDNA 485
Query: 507 VP--PEESGVSPVTDSQITDHLF-------------HREENRTSNHNKNNNSDGN-DKEE 550
V E++ + T +++ + H E+ + + + + N KEE
Sbjct: 486 VAFHLEDANIQADTPTKMNSNSLAMSGGPAAGAGGEHEEQQQDGDGDGSPKQAVNPGKEE 545
Query: 551 KPNSDENDLC----------DSLEHILPDNLFASPKKSAGGHITVFSSASAEVDEKNTSS 600
K S +EHILPD+ FASP K++ + ++ S+A++ +
Sbjct: 546 KTESGPVTATPIVACGFQESGVVEHILPDSPFASPSKASTQNGSIISNAASSL------- 598
Query: 601 VTSTNNNTKLPSTSLNMSSLNSCLLQMSRFSSGQGTIGM 639
P++++ + +SC Q RFS G IG+
Sbjct: 599 -------FPPPASTMELPPYSSCFFQAPRFSPGHEAIGL 630
>gi|413955828|gb|AFW88477.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 684
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 218/494 (44%), Positives = 276/494 (55%), Gaps = 88/494 (17%)
Query: 192 WKHCLYFAKGFCKNGTACKFHH--IHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASV 249
WK CLY+A+GFCKNG +C+F H + AA A A + + + + + Q+ L+RSK+
Sbjct: 233 WKPCLYYARGFCKNGGSCRFVHGGLSDDAAAFAGAKMEAAADQQQQQQCQDFLIRSKS-- 290
Query: 250 QQRKLAAASQF--MGSFP-----YNKCMNFL--------NDTQRSAALMMG--DELHNKF 292
QR +AA + GS P +KC++FL + +A+LM+G DE H KF
Sbjct: 291 -QRLGSAAFPYSSTGSLPGSPSAASKCLSFLLQQQQQQHDRAAAAASLMLGGGDEAH-KF 348
Query: 293 GTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMF 352
R +R DF MNP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMF
Sbjct: 349 MGRPRLDRADFANMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMF 408
Query: 353 GFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSAC 412
GFVTFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +K ++ Q G++ S C
Sbjct: 409 GFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKCRKPQQ-----GDF-SGC 462
Query: 413 SSPSG------PFDFH-FGGRMLYN----NQEMLRRKLEEQADLQQAIEMQGRRLMNLQL 461
++P+G PFD H GGRML + N+ +LRRKLEEQ QQAIE+Q RRLM LQL
Sbjct: 463 TTPTGGLDGGYPFDLHQLGGRMLQHSSSANELLLRRKLEEQ---QQAIELQSRRLMGLQL 519
Query: 462 HLKNNHLNHQFHHGLSNGSPIPSPT----LSHSPNNRTRIFPFEGSDEEVPPEESGVSPV 517
L+ + + SP+P+P S P + T + E P ESG
Sbjct: 520 ------LDLKARAAAAAASPLPTPIGDAFASSQPVSTTAV-------ESPSPPESG---- 562
Query: 518 TDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCDS----LEHILPDNLFA 573
+ S +G DKEE D DS EH LPD+ FA
Sbjct: 563 ----------QQLLKLRSGFALEGKVNGGDKEESAREASPDAADSDQSGGEHNLPDSPFA 612
Query: 574 SPKKSAGGHITVFSSASAE--------VDEKNTSSVTSTNNNTKLPSTSLNMSSLNSCLL 625
SP KSA F++ E VD S + +N+ + P +L + S +S
Sbjct: 613 SPTKSAALLHDSFTATETESTAASRVGVDAGVGSKIDGGSNHLRPP--ALEIPSPSSYFF 670
Query: 626 QMSRFSSGQGTIGM 639
M R SS G +GM
Sbjct: 671 PMHRLSSDHGAMGM 684
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 56/62 (90%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG LLIQD+G+KEMIRLAFGPE+LLH ++ KA+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGEKEMIRLAFGPESLLHAVMAKARKD 60
Query: 61 LS 62
L
Sbjct: 61 LG 62
>gi|414888139|tpg|DAA64153.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 734
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 204/461 (44%), Positives = 258/461 (55%), Gaps = 82/461 (17%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG+LLIQD+G+KEMIRLAFGPE LLH ++ KA+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 LS-------NASASASASAT-NPSSLSPSSAPWLPPAS------------------LSYA 94
L S +A+AT +P LS ++ + S
Sbjct: 61 LGLLPSPGPGTPTSVTAAATHSPFLLSRQNSGRCGAGTAPSPLSVSSPSSWAPPPHFSRT 120
Query: 95 NVVNGSSCSSTNAAASASESLYYSNISNNNSYASSDIADDFHQFQDHLSFLDES------ 148
N V + + AA N + +A+ + D Q Q+ L+FL ++
Sbjct: 121 NSVVSNGAPAEALAADLMSPAAAGNAPPSPFFAAGEPLLDELQLQEQLAFLSDAAAGGHQ 180
Query: 149 ------SELAS--STDADHHNHHHLLKRSLSLPVH------PNVCFGSDDDPNSGLGWKH 194
SE S S DA + L + P H +C G D GLGWK
Sbjct: 181 LPLFDASECRSPGSGDAAGFFPYGALGWANGGPGHRRSSSVSELCLGGAD----GLGWKP 236
Query: 195 CLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQE---LLLRSKASVQQ 251
CLY+A+G+CKNG+AC+F H + ATA K+ L Q+ +LLRSK+ Q
Sbjct: 237 CLYYARGYCKNGSACRFVHGGLTDDATA--------KMDTATLEQQCQDILLRSKS---Q 285
Query: 252 RKLAAASQFMGSFP-----YNKCMNFL-------------NDTQRSAALMMGDELHNKFG 293
R A GS P KC++ L +AALM+G + +KF
Sbjct: 286 RLAAFPYSPTGSVPGSPSAATKCLSLLLHQQQQQNENQRVAAAAAAAALMLGGDDAHKFI 345
Query: 294 TCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFG 353
R +R D +NP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFG
Sbjct: 346 GRPRLDRADLASLVNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFG 405
Query: 354 FVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEK 394
FVTFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +K
Sbjct: 406 FVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDK 446
>gi|212722294|ref|NP_001131248.1| uncharacterized protein LOC100192560 [Zea mays]
gi|195656461|gb|ACG47698.1| nucleic acid binding protein [Zea mays]
Length = 629
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 253/700 (36%), Positives = 360/700 (51%), Gaps = 132/700 (18%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD++EATK VF R++A+DP+NASKIMG LLIQDN DKE+IRLAFGP+ LLH + A+
Sbjct: 1 MDAWEATKAVFDRVRALDPDNASKIMGLLLIQDNSDKELIRLAFGPDHLLHAFVSAARAD 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L A+ AS +P L P W P S T + ++ + +++
Sbjct: 61 L----AAKPASPPSPV-LGPLHQTWGAP-----------PHPSPTAGSDHQHQAPFAADL 104
Query: 121 SNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNVCF 180
+ + + D +F + + S A H +RS SL
Sbjct: 105 ALGYDFDGAGAGAD--------AFFPDDYDCWSPAGAAH-------RRSFSL-------- 141
Query: 181 GSDDDPNSGLG----WKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFE 236
SD + + W+ C+YFA+GFCKNG++C+F H PE AAA ++
Sbjct: 142 -SDAEATAAAAGGAAWRPCMYFARGFCKNGSSCRFLHGF-PEDDDAAA----EREMVVMR 195
Query: 237 LSQELLLRSKASVQQRKLAAASQFMGSFPYNKCMNFL-------NDTQRSAA-----LMM 284
++ QQ+ +A+A F S P +NFL N+ QR+AA L
Sbjct: 196 AKALAAAAARPQQQQQLMASAFPFSPSPPKGVNLNFLLHQHQQQNEPQRAAAAAAMLLQG 255
Query: 285 GDELHNKFGTCS-RPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVR 343
GD++H++F S R +R + S P+ARQIYLTFPADSTF EEDVS YFS+YGPV DVR
Sbjct: 256 GDDMHSRFPVRSPRMDRGELMSS--PAARQIYLTFPADSTFSEEDVSIYFSMYGPVQDVR 313
Query: 344 IPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEK-KQQQHQQQ 402
IPYQQKRMFGFVTFVY ETVK+IL+KGNPHFVCD+RVLVKPYKEKGKV ++ ++ QH
Sbjct: 314 IPYQQKRMFGFVTFVYAETVKIILSKGNPHFVCDARVLVKPYKEKGKVPDRFRKLQHPHH 373
Query: 403 MERGEYSSACSSPSG------PFDF---HFGGRMLYNN----QEMLRRK---LEEQADLQ 446
G++ + C+SP+G PFD G RM+Y N + LRRK ++ A+LQ
Sbjct: 374 ---GDF-AGCTSPTGLLDSRDPFDLQQPQIGPRMMYGNVAGHEAFLRRKLEEQQQAAELQ 429
Query: 447 QAIEMQGRRLMNLQLHLKNNHLNHQFHHGLSNGSPIPSPTL----------SHSPNNRTR 496
QAIE++GRR M L L L H HH S+ + + + TL S + N+
Sbjct: 430 QAIELEGRRFMVLHL-LDLKSRGH--HHLGSSPAAMATTTLGQGDDGCKGRSANGNDNAV 486
Query: 497 IFPFEGSDEEVPPEESGVSPVTDSQITDHLFHREENRTSNHNKNNNSDGNDKEE-KPNSD 555
F E ++ + P + + + S E ++ + DG+ K+ P +
Sbjct: 487 AFHLEDANIQDTPTKMNSNSLAMSGGPAAGAGGEHE---EQQQDGDGDGSPKQAVNPGKE 543
Query: 556 END-----------LC-----DSLEHILPDNLFASPKKSAGGHITVFSSASAEVDEKNTS 599
E C +EHILPD+ FASP K++ + ++ S+A++ +
Sbjct: 544 EKTESGPVTATPIVACGFQESGVVEHILPDSPFASPSKASTQNGSIISNAASSL------ 597
Query: 600 SVTSTNNNTKLPSTSLNMSSLNSCLLQMSRFSSGQGTIGM 639
P++++ + +SC Q RFS G IG+
Sbjct: 598 --------FPPPASTMELPPYSSCFFQAPRFSPGHEAIGL 629
>gi|240256278|ref|NP_568277.5| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
gi|334187639|ref|NP_001190296.1| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
gi|334187641|ref|NP_001190297.1| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
gi|334302925|sp|Q94CJ8.3|C3H55_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 55;
Short=AtC3H55
gi|26453236|dbj|BAC43691.1| unknown protein [Arabidopsis thaliana]
gi|27311807|gb|AAO00869.1| putative protein [Arabidopsis thaliana]
gi|332004426|gb|AED91809.1| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
gi|332004427|gb|AED91810.1| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
gi|332004428|gb|AED91811.1| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
Length = 650
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 234/571 (40%), Positives = 300/571 (52%), Gaps = 87/571 (15%)
Query: 78 LSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNISNNNSYASSDIADDFHQ 137
+SP P P S +N ++ + S +AA A D+ DD Q
Sbjct: 131 ISPKHTPISKPFSSHQSNGLSATHSGSADAAGGA------------------DLLDD-QQ 171
Query: 138 FQDHLSFLDESSE-----------LASSTDADHHNHHHLLKRSLSLPVHPNVCFGSDDDP 186
D LSFLD+S L S D D H H +RS S + F S DD
Sbjct: 172 LNDCLSFLDDSCSKTEDLVDPSIPLDYSVDGDGETHLH--RRSFSC----DASFVSGDDG 225
Query: 187 NSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVG-SPSKLSEFELSQELLLRS 245
G G K C+YF++G CKNG +CKF H P+ IV SP K+ F E ++R
Sbjct: 226 FGG-GCKPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIVADSPRKMENFVRQHEEMMRL 284
Query: 246 KASVQQRKLAAASQFMG---SFPYNKCMNFL--NDTQRSAALMMGDELHNKFGTCS--RP 298
K + QQ++LA SQ +G PY K M+FL QR L GDE +F + S R
Sbjct: 285 KLAYQQQRLA--SQILGRAPQLPYEKRMDFLLQQHAQRDGGLPFGDE---RFWSSSPGRL 339
Query: 299 ERNDFFGSM----NPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGF 354
ER + + N ++RQIYLTFPADSTF++EDV+ YFS++G V DVRIPYQQKRMFGF
Sbjct: 340 ERMELAMHLGDQSNSASRQIYLTFPADSTFKDEDVATYFSLFGTVQDVRIPYQQKRMFGF 399
Query: 355 VTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKK-QQQHQQQMERGEYSSACS 413
V+F +PETVK++LA+GNPHF+CDSRVLVKPYKEKGKV +KK QQ QQQ+ERG Y S CS
Sbjct: 400 VSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLDKKQQQLLQQQIERGNY-SPCS 458
Query: 414 SPSG-----PFDFHFGGRMLYNNQEMLRRKLEEQADLQQAIEMQGRRLMNLQLHLKNNHL 468
SPSG DFH G +MLY +EM+RRK+ EQADL +AIE++ RR +NLQL N +
Sbjct: 459 SPSGIDPREQSDFHLGSKMLYERREMMRRKI-EQADLLRAIELERRRFINLQLPEFKNSV 517
Query: 469 NHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQITDHLFH 528
H S GSP F + + P +S ++ ++TD
Sbjct: 518 TLNHHRSFSVGSP----------------GYFSSAGNQSPDFQSELNGADALKVTDDTLE 561
Query: 529 REENRTSNHNKNNNSDGNDKEEKPNSDE---NDLCDSLEHILPDNLFASPKKSAGGHITV 585
N NNS N +E+ N E D ++E +LP NLF S S H T
Sbjct: 562 LHPYPVVNPMSVNNSYSNGAKEETNKSELLDPDSGSTIELVLPSNLFPS-ASSTDDHKT- 619
Query: 586 FSSASAEVDEKNTSSVTSTNNNTKLPSTSLN 616
SAE + K V+STN N P + N
Sbjct: 620 --DDSAETNAK--VGVSSTNENDHEPPVTTN 646
>gi|297830802|ref|XP_002883283.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329123|gb|EFH59542.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 607
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 253/655 (38%), Positives = 363/655 (55%), Gaps = 105/655 (16%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD + T ++F++I+ ++P+ ASKI+GYLL+QD G ++++RLA GP+TLL ++ KAK+
Sbjct: 1 MDPGDPTSILFTKIRTLEPDFASKIIGYLLLQDLGTRDLMRLALGPDTLLQSVCLKAKSA 60
Query: 61 LSNASASASASATNPSSLSPSSAPW-LPPASLSYANVVNG------------------SS 101
L S++ S++ S L+P S P + SLS ++ NG S
Sbjct: 61 LG---LSSNGSSSASSPLNPISRPINIHRHSLSQSSPGNGFMEFSRNNPLSPSLTTPGSL 117
Query: 102 CSSTNAAAS---ASESLYYSNI-SNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDA 157
S+ N +S AS SL+ S+ + +S + D D+ Q ++LSFL+ESS +
Sbjct: 118 GSNPNMISSPFQASSSLFASDGGAAGDSTGNGDFLDE-QQLGNYLSFLNESSSKNNDESL 176
Query: 158 D------HHNHHHLLKRSLSLPVHPNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKF 211
D + HL KRS S + CFGS++ G G+ +F
Sbjct: 177 DPFGFSADNGDAHLHKRSFSAS---DACFGSEEPGFGGGGYN----------------RF 217
Query: 212 HHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQRKLAAASQFMGS----FPYN 267
H + + GSP +S QE ++R K + QR+ AA+Q++ + Y
Sbjct: 218 PHGGLGDDFDSPGGFGSPDYVSR---QQEEMVRMK--MAQRQRMAAAQYLAATGSPMSYE 272
Query: 268 KCMNFL---NDTQRSAALMMGDELHNKFGTCSRPERNDFFG---SMNPSARQIYLTFPAD 321
K +NFL + RS A G+E + FG+ R ER++F G N +++QIYLTFPAD
Sbjct: 273 KGLNFLLHQRNVHRSGAGQYGEEGY-WFGSPGRHERDEFMGMGDKSNSASKQIYLTFPAD 331
Query: 322 STFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVL 381
S+F +EDVSNYF +GPV DVRIPYQQKRMFGFVTFV+ ETV++ILA+GNPHF+CDSRVL
Sbjct: 332 SSFTDEDVSNYFGTFGPVQDVRIPYQQKRMFGFVTFVHSETVRIILARGNPHFICDSRVL 391
Query: 382 VKPYKEKGKVQEKK-QQQHQQQMERGEYSSACSSPSGP-----FDFHFGGRMLYNNQEML 435
VKPYKEKG++ EK+ QQQ QQMERG +S SSPSG F+ RM N QEM+
Sbjct: 392 VKPYKEKGRILEKRQQQQLLQQMERGNFSPG-SSPSGMDSRDLFESLLSPRMFSNTQEMM 450
Query: 436 RRKLEEQADLQQAIEMQGRRLMNLQLHLKNNH--LNHQFHHGLSNGSPIP-SPTLSHSPN 492
RRK EQADLQQAIE Q RR +NLQL ++ L+HQ LS GSP+ SP +
Sbjct: 451 RRK-AEQADLQQAIEFQRRRFLNLQLPDMDSESFLHHQ--RSLSIGSPVHFSPRV----- 502
Query: 493 NRTRIFPFEGSDEEVPPEESGVSPVTDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKP 552
N++ +F E + +EV E +G S S+ T F + S+ + N+ N +E
Sbjct: 503 NQSMLFRSENTSDEV-FEGNGDSGHFQSEAT-RAFLSDTGHNSSQERVYNNHLNKGQET- 559
Query: 553 NSDENDLCDSLEHILPDNLFASPKKSAGGHITVFSSASAEVDEKNTSSVTSTNNN 607
+LE+ LPD+ F+SP K+ + E +++N +++ T N
Sbjct: 560 ---------TLENALPDSFFSSPSKTG-------ETQHPEFEKENCATLAVTTEN 598
>gi|293333413|ref|NP_001169691.1| uncharacterized protein LOC100383572 [Zea mays]
gi|224030935|gb|ACN34543.1| unknown [Zea mays]
Length = 630
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 210/506 (41%), Positives = 279/506 (55%), Gaps = 96/506 (18%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD++EATK VF R++A+DP+NASKIMG LLIQDN DKE+IRLAFGP+ +LH A+
Sbjct: 1 MDAWEATKAVFDRVRALDPDNASKIMGLLLIQDNSDKELIRLAFGPDHILHAFAAAARAD 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L+ AS + P L ++PW PP+ A +A +L Y
Sbjct: 61 LAAKPASPPSPVPGP--LHQPASPWAPPSD-------------HQQAPFAADHALGYD-- 103
Query: 121 SNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNVCF 180
Y +D AD +F + + S A H +RS SL
Sbjct: 104 -----YDGAD-AD---------TFFSDDYDCWSPAGATAH------RRSFSL-------- 134
Query: 181 GSDDD----PNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFE 236
SD + W+ C+YFA+GFCKNG+AC+F H PE A AA +++
Sbjct: 135 -SDAELAAAAAGPGAWRPCMYFARGFCKNGSACRFLH-GLPEPAPDAA----EREMAVMR 188
Query: 237 LSQELLLRSKASVQQRKLAAASQFMGSFPYNKCMNF----------LNDTQRSAALMM-- 284
++ QQ+ +A+A F S K N ++ QR+ A M+
Sbjct: 189 AKALAAAAARPQQQQQLMASAFPFSPSPSPPKGANLNLLLHHHYQQQSEPQRAGAAMLLQ 248
Query: 285 ---GDELHNKFGTCSRPERNDFFGSM--NPSARQIYLTFPADSTFREEDVSNYFSIYGPV 339
GD++H+ P R D G + +P+ARQIYLTFPADSTF E+DVSNYFS+YGPV
Sbjct: 249 GGGGDDMHSSRFPLRSPGRMDR-GELVSSPAARQIYLTFPADSTFGEDDVSNYFSMYGPV 307
Query: 340 HDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQH 399
DVRIPYQQKRMFGFV+FVY ETV++IL KGNPHFVCD+RVLVKPYKEKGKV ++ ++
Sbjct: 308 QDVRIPYQQKRMFGFVSFVYAETVRIILCKGNPHFVCDARVLVKPYKEKGKVPDRFRKLQ 367
Query: 400 QQQMERGEYSSACSSPSG------PFDF---HFGGRMLYNN----QEMLRRKLEEQADLQ 446
+ G++ + C+SP+G PFD G RM+Y N + LRRKLEEQ Q
Sbjct: 368 HPHL--GDF-AGCTSPTGLLDSRDPFDLQQPQIGPRMMYGNIANHEAFLRRKLEEQ---Q 421
Query: 447 QAIEMQGRRLMNLQ---LHLKNNHLN 469
QAIE++GRR M L L ++ +HL
Sbjct: 422 QAIELEGRRFMGLHLLDLKIRGHHLG 447
>gi|242069801|ref|XP_002450177.1| hypothetical protein SORBIDRAFT_05g001540 [Sorghum bicolor]
gi|241936020|gb|EES09165.1| hypothetical protein SORBIDRAFT_05g001540 [Sorghum bicolor]
Length = 612
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 232/680 (34%), Positives = 328/680 (48%), Gaps = 109/680 (16%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD++EATK+VF R++ +DPENAS++MG LLIQDN DKE+IRLAFGP+ LLH + A+
Sbjct: 1 MDAWEATKVVFDRVRELDPENASRMMGLLLIQDNSDKELIRLAFGPDHLLHAFVATARAE 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L A N SP S P L P + G + A A
Sbjct: 61 L----------AANGKPASPPS-PVLGP-------LQTGPPWGLPSPGAGA--------- 93
Query: 121 SNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNVCF 180
+++ + S AD HQ + D + H RS SL
Sbjct: 94 -DHHHHQHSPFAD--HQLGYDGAAADAFYADDYDVWSPAGGAH---CRSFSL-------- 139
Query: 181 GSDDDPNSGLGWKHCLYFAKGFCKNGTACKF-HHIHSPEAATAAAIVGSPSKLSEFELSQ 239
D + W+ C+Y+A+G+CKNG++C+F H + +AA V
Sbjct: 140 --SDAEAAAASWRPCMYYARGYCKNGSSCRFLHGVPEDDAAEREMAVMRARPSPPRRRRS 197
Query: 240 ELLLRSKASVQQRKLAAASQFMGSFPYNKCMNFLNDTQRSAALMMGDELHNKFGTCSRPE 299
R+++ + ++LAAA+ + ++ G+++H R +
Sbjct: 198 SWRPRTRSRRRPKELAAAAA-------------------AGMVLGGEDMHRFPVRSPRMD 238
Query: 300 RNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVY 359
R D GS P+ARQIYLTFPADSTF EEDVSNYFS++GPV DVRIPYQQKRMFGFVTFVY
Sbjct: 239 RGDLIGS--PAARQIYLTFPADSTFSEEDVSNYFSMFGPVQDVRIPYQQKRMFGFVTFVY 296
Query: 360 PETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSG-- 417
ETVK++L+KGNPHFVCD+RVLVKPYKEKGKV ++ ++ GE++ C+SP+G
Sbjct: 297 AETVKVLLSKGNPHFVCDARVLVKPYKEKGKVPDRFRKLQHAHHGVGEFA-GCTSPTGLL 355
Query: 418 ----PFDFH---FGGRMLYNN----QEMLRRKLEEQADLQQA---IEMQGRRLMNLQLHL 463
P+D G RM+Y N + LRRKLEEQ + IE++GRR M LQL
Sbjct: 356 DSRDPYDLQQPQIGPRMMYGNMANHEAFLRRKLEEQQQAAELQQAIELEGRRFMGLQLLD 415
Query: 464 KNNHLNHQFHHG--LSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQ 521
+ +H G + GSP+ + E+V + +S +
Sbjct: 416 LKSRGHHHLGLGSPVGAGSPMSLGQADGKGSGNHGNGGNASHLEDVTGIQERMSSTSSVA 475
Query: 522 ITDHLFHREENRTSNHNKNNNSDGNDKEEK------PNSDE-----------NDLCD--- 561
++ ++ +G D K P +E N C
Sbjct: 476 MSAPAAASATADAEGKHEEQQGEGGDGSPKQKQAVNPGEEEKVEYGPVTATPNAACGFQE 535
Query: 562 --SLEHILPDNLFASPKKSAGGHITVFSSASAEVDEKNTSSVTSTNNNTKLPSTSLNMSS 619
+EHILPD+ FASP K++ I ++A+ + + SS + ++L +
Sbjct: 536 SGVVEHILPDSPFASPAKAS---IDTVTAATVQNGSISNSSPHHLASALFPAVSTLELPP 592
Query: 620 LNSCLLQMSRFSSGQGTIGM 639
NSC Q+ RFS G IG+
Sbjct: 593 YNSCFFQVPRFSPGHEAIGL 612
>gi|357121462|ref|XP_003562439.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Brachypodium distachyon]
Length = 699
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 216/503 (42%), Positives = 280/503 (55%), Gaps = 100/503 (19%)
Query: 190 LGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQE---LLLRSK 246
LGWK C+Y+A+G+CKNG+AC+F H + A +K+ + + Q+ LLRSK
Sbjct: 244 LGWKPCMYYARGYCKNGSACRFVHGGGGFSDDLAG-----AKMDQAAVEQQCHDFLLRSK 298
Query: 247 ASVQQRKLAAASQFMGSFPYN-------------KCMNFL-------NDTQRSAA----- 281
+ ++LA G FPY+ KC++ L N++QR+AA
Sbjct: 299 S----QRLA------GGFPYSPTGSLPGSPSAASKCLSLLLQQHQQQNESQRAAAAAAAA 348
Query: 282 --LMMGDELHNKFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPV 339
LM+G + +KF +R +R DF MNP +RQIYLTFPADSTFREEDVS YF+IYGPV
Sbjct: 349 AALMLGGDEAHKFMGRARLDRGDFASMMNPGSRQIYLTFPADSTFREEDVSTYFNIYGPV 408
Query: 340 HDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQH 399
HDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +K ++Q
Sbjct: 409 HDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKFRKQ- 467
Query: 400 QQQMERGEYSSACSSPSG-----PFDFH-FGGRMLYN----NQEMLRRKLEEQADLQQA- 448
Q ER +++S C+SP+G PFD H G RML + N+ +LRRKLEEQ +
Sbjct: 468 --QGERMDFAS-CTSPTGLDARDPFDLHPLGSRMLQHSNSANEMLLRRKLEEQQQAAELQ 524
Query: 449 --IEMQGRRLMNLQL-HLKNNHLNHQFHHGLSNGSPIPSPTLS-HSPNNRTRIFPFEGSD 504
IE+Q RRLM LQL LK S + +P+P + SP++ T P
Sbjct: 525 QAIELQSRRLMGLQLLDLK------------SRSAALPTPIGNPFSPSHTTGATP----T 568
Query: 505 EEVPPEESGVSPVTDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLE 564
E PP+ + Q F + N + S G D P++D + S E
Sbjct: 569 VESPPD-------SGEQGNGCGFLFPHKKAVNGADKDESAG-DSTTSPHTDSDQ---SAE 617
Query: 565 HILPDNLFASPKKSAGGHITVFSSASAEVDEKNTSSVTS--------TNNNTKLPSTSLN 616
H LPD+ FASP KSA F+ AE+ +T S + N LP +L+
Sbjct: 618 HNLPDSPFASPTKSAAFSRDPFAPTEAEISAASTGCNASYAGIRNGGSGANHLLP-PALD 676
Query: 617 MSSLNSCLLQMSRFSSGQGTIGM 639
+ S C MSR SS G IGM
Sbjct: 677 IPSPKPCFFPMSRLSSDHGAIGM 699
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 56/59 (94%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKT 59
MD+YEATK+VF+RI+ +DP++A+KIMGYLLIQD+G+KEMIRLAFGPE LLH+++ KA+T
Sbjct: 1 MDAYEATKVVFARIQGLDPDHAAKIMGYLLIQDHGEKEMIRLAFGPEALLHSVMAKART 59
>gi|222624859|gb|EEE58991.1| hypothetical protein OsJ_10701 [Oryza sativa Japonica Group]
Length = 677
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 220/500 (44%), Positives = 276/500 (55%), Gaps = 82/500 (16%)
Query: 178 VCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFEL 237
+C G D G GWK CLY+A+GFCKNG+ C+F H + A A +E +
Sbjct: 222 LCLGGD-----GFGWKPCLYYARGFCKNGSTCRFVHGGLSDDAAMDATT------AEQQQ 270
Query: 238 SQELLLRSKASVQQRKLAAASQFM--GSFP-----YNKCMNFL-------NDTQRSAALM 283
Q+ LLRSK+ QR AA F GS P +KC++ L ND QR+AA
Sbjct: 271 CQDFLLRSKS---QRLGPAAFPFTPTGSLPASPSATSKCLSLLLQQQQQHNDNQRAAAAA 327
Query: 284 M----GDELHNKFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPV 339
+ GDE H KF R +R DF MNP +RQIYLTFPADSTFREEDVSNYFSIYGPV
Sbjct: 328 LMLAGGDEAH-KFMGRPRLDRVDFASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPV 386
Query: 340 HDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQH 399
HDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +K ++Q
Sbjct: 387 HDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQ 446
Query: 400 QQQMERGEYSSACSSPSG-----PFDFH-FGGRMLYN----NQEMLRRK---LEEQADLQ 446
Q G++ C SP+G PFDFH G RML + N+ MLRRK ++ A+LQ
Sbjct: 447 Q-----GDF--CCMSPTGLDARDPFDFHQLGARMLQHSNSANELMLRRKLEEQQQAAELQ 499
Query: 447 QAIEMQGRRLMNLQ-LHLKNNHLNHQFH-HGLSNGSPIPSPTLSHSPNNRTRIFPFEGSD 504
QAI++ RRL+ LQ L LK++ H +S +PI + S P T +
Sbjct: 500 QAIDLHSRRLIGLQLLDLKSSAAVHAAETTTMSLPTPITNAFTSGQPGATTIV------- 552
Query: 505 EEVPPEESGVSPVTDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLE 564
E PP +G Q+ E + N +S G E N+D + S E
Sbjct: 553 -ESPPSSTG-------QLMASCGSPSEGKVVNGGNKADSAG---EVTRNADSD---QSGE 598
Query: 565 HILPDNLFASPKKSAGGHITVFSSA-SAEVDEKNTSSV----TSTNNNTKLPSTSLNMSS 619
H LPD+ FAS KS ++A +E D SS ++ + L +L++ S
Sbjct: 599 HNLPDSPFASSTKSTAFFTATAATAIGSEGDFTTGSSCNIGGSAVGSANPLRPPTLDIPS 658
Query: 620 LNSCLLQMSRFSSGQGTIGM 639
+C M R S G IGM
Sbjct: 659 PRTCFFPMPRLSE-HGAIGM 677
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VFSRI+A+DP++A+KIMG LLIQD+GDKEMIRLAFGPE LLH+++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LS--NASASASASATNPSSLSP 80
L+ +AS+S T P++ SP
Sbjct: 61 LALLPPPQAASSSPTVPAAHSP 82
>gi|357161178|ref|XP_003579005.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Brachypodium distachyon]
Length = 612
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 206/515 (40%), Positives = 278/515 (53%), Gaps = 110/515 (21%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VF+R++A+DPE ASKIMG LL+QD +++MIRLAFGPE LLH ++ +A+
Sbjct: 1 MDAYEATKVVFARVQALDPELASKIMGMLLVQDRSEEDMIRLAFGPEHLLHTVVARARAD 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
+ A S S+ P S P LPP + + +G AA+ E ++
Sbjct: 61 I--AGHRLSPSSPPPPSPWEDDLPPLPPGAFA----GDGQRFDGDGRAAAMEELIWGEQ- 113
Query: 121 SNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNVCF 180
Q Q H +RSLSL
Sbjct: 114 ----------------QQQQH-------------------------RRSLSL-------- 124
Query: 181 GSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQE 240
D ++ GWK CLY+A+GFCKNG +C+F H P+ A AAA E ++
Sbjct: 125 ---SDADAAGGWKPCLYYARGFCKNGGSCRFVHGGLPDHALAAA---------EQDMGDA 172
Query: 241 LLLRSKASVQQRKLAAASQFMGSFPYN---KCMNFL-------------NDTQRSAALMM 284
+ + + +L A++ FP++ + +NFL A
Sbjct: 173 IRAARAEAAVRSELMASA-----FPFSPSPRGLNFLLQQQQHQQSDSQRAAAAMMLAGGG 227
Query: 285 GDELHNKFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRI 344
GD++H R +R + NP+ARQIYLTFPADSTF EEDVS+YFS+YGPV DVRI
Sbjct: 228 GDDMHKFAVRSPRLDRCVSDLASNPAARQIYLTFPADSTFSEEDVSSYFSMYGPVQDVRI 287
Query: 345 PYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEK-KQQQHQQQM 403
PYQQKRMFGFVTFVY ETV+LILAKGNPHFVCD+RVLVKPYKEKGKV ++ ++ H Q
Sbjct: 288 PYQQKRMFGFVTFVYAETVRLILAKGNPHFVCDARVLVKPYKEKGKVPDRFRKFPHAHQ- 346
Query: 404 ERGEYSSACSSPSG------PFDF---HFGGRMLYNN----QEMLRRK---LEEQADLQQ 447
G+++ + ++P+G PFD G RM+Y N + LRRK ++ A+LQQ
Sbjct: 347 --GDFAGS-TTPTGLLDSRDPFDLQSPQIGPRMMYANMGSHEAFLRRKLEEQQQAAELQQ 403
Query: 448 AIEMQGRRLMNLQLHLKNNHLNHQFHHGLSNGSPI 482
AI++QGRR M LQL + +H H GSP+
Sbjct: 404 AIDLQGRRFMGLQLMDMKSRGHHHHHLASPIGSPV 438
>gi|326491203|dbj|BAK05701.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 241/688 (35%), Positives = 344/688 (50%), Gaps = 139/688 (20%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEATK+VF+R++A+ P+ ASKIMG LLIQD +++MIRLAFGPE LL ++
Sbjct: 1 MDAYEATKVVFARVQALHPDLASKIMGMLLIQDKSEEDMIRLAFGPEHLLQGVV------ 54
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
+ + A+A + + SP +A W G+ S+ +A + Y +
Sbjct: 55 --ARARADLAAAAHHNKPSPPAASW-------------GAGLSAEDAPFPGVDHARYEGV 99
Query: 121 SNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNVCF 180
YA +E + ++ H +RS SL
Sbjct: 100 GGEGFYAP-----------------EEYGCWSPASGGQH-------RRSFSL-------- 127
Query: 181 GSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQE 240
SD + +G GWK C+Y+A+GFCKNG++C+F H G P ++E Q+
Sbjct: 128 -SDAEAAAG-GWKPCMYYARGFCKNGSSCRFVH-------------GLPDHVTE----QD 168
Query: 241 LLLRSKASVQQRKLAAASQFMGSFPYNKCMNFL---------NDTQR--------SAALM 283
+ + + A+ + + + +NFL +D+QR
Sbjct: 169 MDVWTAATRSELMPSPFPFLP----SPRGLNFLLQQQQQQQQSDSQRAAAAAAMLLGGGG 224
Query: 284 MGDELHNKFGTCSRPERNDFFGSM--NPSARQIYLTFPADSTFREEDVSNYFSIYGPVHD 341
G + +KF R R D G + NP+ARQIYLTFPADSTF EEDVS+YFS YGPV D
Sbjct: 225 GGGDDMHKFSV--RSPRMDRGGDLASNPAARQIYLTFPADSTFSEEDVSSYFSYYGPVQD 282
Query: 342 VRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQ 401
VRIPYQQKRMFGFVTFVY ETV+LILAKGNPHFVCD+RVLVKPYKEKGKV ++ ++ Q
Sbjct: 283 VRIPYQQKRMFGFVTFVYAETVRLILAKGNPHFVCDARVLVKPYKEKGKVPDRFRK--FQ 340
Query: 402 QMERGEYSSACSSPSG------PFDF---HFGGRMLYNN----QEMLRRK---LEEQADL 445
+ G++ + C++P+G PFD G RM++ N + LRRK ++ A+L
Sbjct: 341 APQHGDF-AGCTTPTGLLDSRDPFDLQSPQIGPRMMFGNTGSHEAFLRRKLEEQQQAAEL 399
Query: 446 QQAIEMQGRRLMNLQ-LHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSD 504
QQAI++Q RR M LQ L LK H HH GSP+ + + N + + +
Sbjct: 400 QQAIDLQSRRFMGLQFLDLKRGH-----HH---LGSPV-ALRQTDGIGNGNAVHLEDAAI 450
Query: 505 EEVPPEESGVSPVTDSQITDHLF---HREENRTSNHNKNNNSDGNDKEE-------KPNS 554
++ + + + I + +EE N N+ NS ++K E +
Sbjct: 451 QDHKMSSAMMMASAPAAICATIATEGRQEEESDGNANQGVNSGEDEKRESGPPGAAAAAA 510
Query: 555 DENDLCDS--LEHILPDNLFASPKKSAGGHITVFSSASAEVDEKNTSSVTSTNNNTKLPS 612
N +S EH LPD+ FASP K+ + A A N SS ++ P+
Sbjct: 511 SANGFQESGVEEHNLPDSPFASPTKTKDAATSSAEPALAGSIISNNSSSHLVASSLFPPT 570
Query: 613 -TSLNMSSLNSCLLQMSRFSSGQGTIGM 639
T+L + SC Q+ RFS G G IG+
Sbjct: 571 PTALELPPYKSCFFQVPRFSPGHGAIGL 598
>gi|297811379|ref|XP_002873573.1| hypothetical protein ARALYDRAFT_325766 [Arabidopsis lyrata subsp.
lyrata]
gi|297319410|gb|EFH49832.1| hypothetical protein ARALYDRAFT_325766 [Arabidopsis lyrata subsp.
lyrata]
Length = 651
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 229/574 (39%), Positives = 294/574 (51%), Gaps = 92/574 (16%)
Query: 78 LSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNISNNNSYASSDIADDFHQ 137
+SP P P S +N V+ + S +A +A D+ DD Q
Sbjct: 131 ISPKHTPIPKPFSSHQSNGVSATDSGSADAGGNA------------------DLLDD-QQ 171
Query: 138 FQDHLSFLDESSE-----------LASSTDADHHNHHHLLKRSLSLPVHPNVCFGSDDDP 186
D+LSFLD+S L S D HL +RS S
Sbjct: 172 LNDYLSFLDDSCSKTEDLVDPRIPLDYSVD---DGETHLHRRSFSADASFGSGDDG---- 224
Query: 187 NSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVG-SPSKLSEFELSQELLLRS 245
G G K C+YF++G CKNG +CKF H PE IV SP K+ F E ++R
Sbjct: 225 -FGSGCKPCVYFSRGLCKNGESCKFIHGGYPENMDCNGIVADSPRKMENFVRQHEEMMRL 283
Query: 246 KASVQQRKLAAASQFMGS---FPYNKCMNFL--NDTQRSAALMMGDELHNKFGTCS--RP 298
K + QQ++LA SQ +G PY K M+FL QR L GDE +F + S R
Sbjct: 284 KLAYQQQRLA--SQILGRAPLLPYEKRMDFLLQQHAQRDGGLPFGDE---RFWSSSPGRL 338
Query: 299 ERNDFFGSM-----NPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFG 353
ER + N +RQIYLTFPADSTF++EDV+ YFS++G V DVRIPYQQKRMFG
Sbjct: 339 ERMELMAMQLGDQSNSVSRQIYLTFPADSTFKDEDVATYFSLFGTVQDVRIPYQQKRMFG 398
Query: 354 FVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKK-QQQHQQQMERGEYSSAC 412
FV+F +PETVK++LA+GNPHF+CDSRVLVKPYKEKGKV +KK QQ QQQ+ERG Y S C
Sbjct: 399 FVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLDKKQQQLLQQQIERGNY-SPC 457
Query: 413 SSPSG-----PFDFHF-GGRMLYNNQEMLRRKLEEQADLQQAIEMQGRRLMNLQLHLKNN 466
SSPSG DFH G +MLY +EM+RRK+ EQADL +AIE++ RR +NLQL N
Sbjct: 458 SSPSGVDPREQSDFHLVGSKMLYERREMMRRKM-EQADLLRAIELERRRFINLQLPEFKN 516
Query: 467 HLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQITDHL 526
+ H S GSP F + + P +S ++ ++ D
Sbjct: 517 SVMQNHHRSFSVGSP----------------GYFSSASNQSPDFQSELTVADALEVVDDT 560
Query: 527 FHREENRTSN-HNKNNNSDGNDKEEKPNSD--ENDLCDSLEHILPDNLFASPKKSAGGHI 583
N + NNN KE S+ E D ++E +LP NLF S S H
Sbjct: 561 SELHPYPVINPMSVNNNYSKGAKEWTDKSELLEPDTGSTIELVLPSNLFPS-ASSTDDHK 619
Query: 584 TVFSSAS-AEVDEKNTSSVTSTNNNTKLPSTSLN 616
T S+A+ A+V V+STN N P + N
Sbjct: 620 TDDSAATNAKV------GVSSTNGNDNEPPVTTN 647
>gi|413924733|gb|AFW64665.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 697
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 176/403 (43%), Positives = 227/403 (56%), Gaps = 61/403 (15%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD++EATK+VF R++A+DPENASK+MG LLIQDN DKE+IRLAFGPE LLH+ + A+
Sbjct: 1 MDAWEATKVVFDRVRALDPENASKMMGLLLIQDNSDKELIRLAFGPEHLLHSFVATARAE 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L+ AS + P S APW P+ S A G + A+A + Y
Sbjct: 61 LAAKPASPPSPVLGPLQ---SGAPWGLPSPGSGAGGGGGGDHHHHSPFAAADQLGYDGG- 116
Query: 121 SNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNVCF 180
AD F + DE + + A H +RS SL
Sbjct: 117 -----------ADAF--------YADEYDCWSPAGAAGAH------RRSFSL-------- 143
Query: 181 GSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQE 240
D + W+ C+Y+A+G+CKNG++C+F H PE A E + +
Sbjct: 144 ---SDAEAAASWRPCMYYARGYCKNGSSCRFLH-GVPEDDAAE---------REMAVMRA 190
Query: 241 LLLRSKASVQQRKLAAASQFMGSFPYNKCMNFLN-------DTQRSAALMM--GDELHNK 291
L + QQ++L A++ P +TQR+AA M+ G+++H
Sbjct: 191 KALAAAPPTQQQQLMASAYPFSPSPKGGVSLSFLLQQQQQSETQRAAAGMLLGGEDMHRF 250
Query: 292 FGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRM 351
R +R D GS P+ARQIYLTFPADSTF EEDVSNYFS++GPV DVRIPYQQKRM
Sbjct: 251 PVRSPRMDRGDLIGS--PAARQIYLTFPADSTFSEEDVSNYFSMFGPVQDVRIPYQQKRM 308
Query: 352 FGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEK 394
FGFVTFVY ETVK IL+KGNPHFVCD+RVLVKPYKEKGKV ++
Sbjct: 309 FGFVTFVYAETVKAILSKGNPHFVCDARVLVKPYKEKGKVPDR 351
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 20/89 (22%)
Query: 411 ACSSPSG------PFDFH---FGGRMLYNN-----QEMLRRKLEEQ--ADLQQAIEMQGR 454
C+SP+G P+D G RM+Y N + LRRKLEE+ A+LQQAIE++GR
Sbjct: 431 GCASPTGLLDSRDPYDLQQPQIGSRMMYGNIANQHEAFLRRKLEEEQAAELQQAIELEGR 490
Query: 455 RLMNLQLHLKNNHLNHQFHHGLSNGSPIP 483
R M LQL L + HH L +G+P+P
Sbjct: 491 RFMGLQLL----DLKSRGHHHLGSGAPMP 515
>gi|414876221|tpg|DAA53352.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 587
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 167/300 (55%), Positives = 200/300 (66%), Gaps = 40/300 (13%)
Query: 192 WKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQ 251
WK CLY+A GFCKNG +C+F H + A A A + + + Q+ L+RSK Q
Sbjct: 226 WKPCLYYASGFCKNGGSCRFVHGGLSDDAVALAGTKMEAAADQQQQCQDFLIRSKG---Q 282
Query: 252 RKLAAASQF--MGSFP-----YNKCMNFL------NDTQRSAALMM---GDELHNKFGTC 295
R A + GS P +KC++FL +D +AA +M GDE H KF
Sbjct: 283 RLGPAVFPYSPTGSLPGSPSAASKCLSFLLQQRQQHDRAAAAASLMLGGGDEAH-KFMAR 341
Query: 296 SRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFV 355
R +R DF MNPS+RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFV
Sbjct: 342 PRLDRADFASLMNPSSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFV 401
Query: 356 TFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSP 415
TFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +K ++Q Q G++ S ++P
Sbjct: 402 TFVYPETVKLILAKGNPHFICDTRVLVKPYKEKGKVPDKYRKQQQ-----GDF-SGYTTP 455
Query: 416 SG------PFDFH-FGGRMLYN----NQEMLRRKLEEQ---ADLQQAIEMQGRRLMNLQL 461
+G PFD H G RML + N+ +LRRKLEEQ A+LQ AIE+Q RRLM LQL
Sbjct: 456 TGGLDARDPFDLHQLGARMLQHSNSANELLLRRKLEEQQQAAELQHAIELQSRRLMGLQL 515
>gi|449525104|ref|XP_004169559.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Cucumis sativus]
Length = 349
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 180/376 (47%), Positives = 228/376 (60%), Gaps = 61/376 (16%)
Query: 280 AALMMGDELHN--KFGTCSRPERNDFFGSM--NPSARQIYLTFPADSTFREEDVSNYFSI 335
A L MG+E +N +F R ER+DF G NP+ARQIYLTFPA+S F+EEDVS YFSI
Sbjct: 6 AGLSMGEESNNSGRF----RLERSDFSGGGMGNPAARQIYLTFPAESCFKEEDVSKYFSI 61
Query: 336 YGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKK 395
YGPV DVRIPYQQKRMFGFVTFVY ETVKLILAKGNPHFVCDSRVLVKPYKEKGKV +K
Sbjct: 62 YGPVQDVRIPYQQKRMFGFVTFVYAETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPDKF 121
Query: 396 QQQHQQQMERGEYSSACSSPSG-----PFDFHFGGRMLYNNQEML-RRKLEEQADLQQAI 449
++ QQQMERG+ S C +P+G D H G RM YN+Q+ML RRKLEEQADLQQA+
Sbjct: 122 RK--QQQMERGDL-SPCGTPTGLDSRDLHDLHHGARMYYNSQDMLWRRKLEEQADLQQAL 178
Query: 450 EMQGRRLMNLQLHLKNNHLNHQFHHGLSNGSPIPSP-----TLSHSPNNRTRIFPFEGSD 504
E+Q R+M+LQL L+H H LS SPIPSP TL HS +++
Sbjct: 179 ELQALRVMSLQLADVRKPLHH--HTPLSTCSPIPSPNPFNQTLFHSIPTNSQLL------ 230
Query: 505 EEVPPEESGVSPVTDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCD-SL 563
+E+G + + + ++ + NN D + N E DL + SL
Sbjct: 231 -----QENGSNHLPEIRVEPQVM-------------NNFDLTADSDSSNGKETDLQETSL 272
Query: 564 EHILPDNLFASPKKSAGGHITVFSSASAEVDEKNTSSVTSTNNNTKLPSTSLNMSSLNSC 623
EH LPD+ FAS ++ + E DE + S+ + ++ +P+++L S
Sbjct: 273 EHNLPDSPFAS---------ASYTPSVVEADESDASTDNHSAASSFVPTSNLTAPPFKSF 323
Query: 624 LLQMSRFSSGQGTIGM 639
Q +SSG G IG+
Sbjct: 324 NCQ---YSSGHGAIGL 336
>gi|224029225|gb|ACN33688.1| unknown [Zea mays]
Length = 605
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 192/481 (39%), Positives = 256/481 (53%), Gaps = 96/481 (19%)
Query: 26 MGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTHLSNASASASASATNPSSLSPSSAPW 85
MG LLIQDN DKE++RLAFGP+ +LH A+ L+ AS + P L ++PW
Sbjct: 1 MGLLLIQDNSDKELVRLAFGPDHILHAFAAAARADLAAKPASPPSPVPGP--LHQPASPW 58
Query: 86 LPPASLSYANVVNGSSCSSTNAAASASESLYYSNISNNNSYASSDIADDFHQFQDHLSFL 145
PP+ A +A +L Y Y +D AD +F
Sbjct: 59 APPSD-------------HQQAPFAADHALGYD-------YDGAD-AD---------TFF 88
Query: 146 DESSELASSTDADHHNHHHLLKRSLSLPVHPNVCFGSDDD----PNSGLGWKHCLYFAKG 201
+ + S A H +RS SL SD + W+ C+YFA+G
Sbjct: 89 SDDYDCWSPAGATAH------RRSFSL---------SDAELAAAAAGPGAWRPCMYFARG 133
Query: 202 FCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQRKLAAASQFM 261
FCKNG+AC+F H PE A AA +++ ++ QQ+ +A+A F
Sbjct: 134 FCKNGSACRFLH-GLPEPAPDAAE----REMAVMRAKALAAAAARPQQQQQLMASAFPFS 188
Query: 262 GSFPYNKCMNF----------LNDTQRSAALMM-----GDELHNKFGTCSRPERNDFFGS 306
S K N ++ QR+ A M+ GD++H+ P R D G
Sbjct: 189 PSPSPPKGANLNLLLHHHYQQQSEPQRAGAAMLLQGGGGDDMHSSRFPLRSPGRMDR-GE 247
Query: 307 M--NPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVK 364
+ +P+ARQIYLTFPADSTF E+DVSNYFS+YGPV DVRIPYQQKRMFGFV+FVY ETV+
Sbjct: 248 LVSSPAARQIYLTFPADSTFGEDDVSNYFSMYGPVQDVRIPYQQKRMFGFVSFVYAETVR 307
Query: 365 LILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSG------P 418
+IL KGNPHFVCD+RVLVKPYKEKGKV ++ ++ + G++ + C+SP+G P
Sbjct: 308 IILCKGNPHFVCDARVLVKPYKEKGKVPDRFRKLQHPHL--GDF-AGCTSPTGLLDSRDP 364
Query: 419 FDF---HFGGRMLYNN----QEMLRRKLEEQADLQQAIEMQGRRLMNLQ---LHLKNNHL 468
FD G RM+Y N + LRRKLEEQ QQAIE++GRR M L L ++ +HL
Sbjct: 365 FDLQQPQIGPRMMYGNIANHEAFLRRKLEEQ---QQAIELEGRRFMGLHLLDLKIRGHHL 421
Query: 469 N 469
Sbjct: 422 G 422
>gi|414866607|tpg|DAA45164.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 356
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 172/360 (47%), Positives = 206/360 (57%), Gaps = 55/360 (15%)
Query: 299 ERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFV 358
+R DF MNP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFV
Sbjct: 33 DRADFASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFV 92
Query: 359 YPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSG- 417
YPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +K ++Q Q G++ S C++P+G
Sbjct: 93 YPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQQ-----GDF-SGCTTPTGG 146
Query: 418 -----PFDFH-FGGRMLYN----NQEMLRRKLEEQ---ADLQQAIEMQGRRLMNLQLHLK 464
PFD H G RML + N+ +LRRKLEEQ A+LQ AIE+Q RRLM LQL L
Sbjct: 147 LDARDPFDLHQLGARMLQHSNSANELLLRRKLEEQQQAAELQHAIELQSRRLMGLQL-LD 205
Query: 465 NNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQITD 524
L +PI + S P + + P ESG
Sbjct: 206 LKARAAATASALP--TPIANAFASSHPLSTMAV---------ESPLESG----------- 243
Query: 525 HLFHREENRTSNHNKNNNSDGNDKEE---KPNSDENDLCDSLEHILPDNLFASPKKSAGG 581
+ +S + +G DKEE + + D D S EH LPD+ FASP KSA
Sbjct: 244 ----EQLKLSSGFALDGKLNGGDKEESACEASPDAADSDQSGEHNLPDSPFASPTKSAA- 298
Query: 582 HITVFSSASAEVDEKNTSSVTST--NNNTKLPSTSLNMSSLNSCLLQMSRFSSGQGTIGM 639
V S +A E S V S + L +L + S +S M R SS G +GM
Sbjct: 299 --LVHDSFAATEPENTASCVGSKIDGGSNHLRPPALEIPSPSSYFFPMRRLSSDHGAMGM 356
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 33/36 (91%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGD 36
MD+YEATK+VFSRI+A+DP++A+KIMG LLIQD D
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDRAD 36
>gi|224104195|ref|XP_002313354.1| predicted protein [Populus trichocarpa]
gi|222849762|gb|EEE87309.1| predicted protein [Populus trichocarpa]
Length = 446
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 183/414 (44%), Positives = 225/414 (54%), Gaps = 70/414 (16%)
Query: 233 SEFELSQELLLRSKASVQQRKLAAASQFMGSFPYNKCMNFL----NDTQR--SAALMMGD 286
S F + QE L+R KA A Q YNK MNFL N T R +AA MMGD
Sbjct: 64 SLFMVQQEELMRMKA--------AQQQQQQRMAYNKYMNFLLQQQNKTDRLGAAAAMMGD 115
Query: 287 ELHNKFGTCSRPERNDFFG-----SMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHD 341
E +N F R RN FF N ++RQIYLTFPADS+F++EDVSNYF +GPV D
Sbjct: 116 EFYN-FSRL-RGGRNGFFAMGMAEKANSASRQIYLTFPADSSFKDEDVSNYFCSFGPVQD 173
Query: 342 VRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQ 401
VRIPYQQKRMFGFVTFV+PETVK ILAKGNPH++C+SRVLVKPYKEKGKV K
Sbjct: 174 VRIPYQQKRMFGFVTFVHPETVKEILAKGNPHYICESRVLVKPYKEKGKVANK------- 226
Query: 402 QMERGEYSSACSSPSGPFDFHF------------------GGRMLYNNQE-MLRRKLEEQ 442
C+S FH RMLYN E MLRRKLEEQ
Sbjct: 227 --------YGCNSYLRGGIFHLLQALQVLILESYVIFTLVRARMLYNTPEIMLRRKLEEQ 278
Query: 443 ADLQQAIEMQGRRLMNLQL-HLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFE 501
A+LQQAIE+QGRRL+NLQL L+ +++ H+ LS G+PI T HSP N+T I
Sbjct: 279 AELQQAIELQGRRLINLQLPDLRGDYV-HRHQRSLSVGAPISLHT-HHSPINQTDILTSN 336
Query: 502 GSDEEVPPEESGVSPVTDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCD 561
G +E +E +S T S + ++ + NN + N K E
Sbjct: 337 GKNEITLEDEGNLSGATKSTYIAAIEQNLQDELNAAYIQNNDNVNCKVESFTESHGS--- 393
Query: 562 SLEHILPDNLFASPKKSAGGHITVFSSASAEVDEKNTSSVTS-TNNNTKLPSTS 614
++ PDNL K S H +F A A+ E N SV+S + N+ +P+TS
Sbjct: 394 ---NVEPDNL---TKSSENQHSDLFPYAKAK--ESNELSVSSWSENDASVPTTS 439
>gi|414876222|tpg|DAA53353.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 625
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 152/289 (52%), Positives = 179/289 (61%), Gaps = 58/289 (20%)
Query: 192 WKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQ 251
WK CLY+A GFCKNG +C+F H + A A A + + + Q+ L+RSK Q
Sbjct: 226 WKPCLYYASGFCKNGGSCRFVHGGLSDDAVALAGTKMEAAADQQQQCQDFLIRSKG---Q 282
Query: 252 RKLAAASQF--MGSFP-----YNKCMNFL------NDTQRSAALMM---GDELHNKFGTC 295
R A + GS P +KC++FL +D +AA +M GDE H KF
Sbjct: 283 RLGPAVFPYSPTGSLPGSPSAASKCLSFLLQQRQQHDRAAAAASLMLGGGDEAH-KFMAR 341
Query: 296 SRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFV 355
R +R DF MNPS+RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFV
Sbjct: 342 PRLDRADFASLMNPSSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFV 401
Query: 356 TFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSP 415
TFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGK +S++
Sbjct: 402 TFVYPETVKLILAKGNPHFICDTRVLVKPYKEKGK-----------------HSNSA--- 441
Query: 416 SGPFDFHFGGRMLYNNQEMLRRKLEEQ---ADLQQAIEMQGRRLMNLQL 461
N+ +LRRKLEEQ A+LQ AIE+Q RRLM LQL
Sbjct: 442 ---------------NELLLRRKLEEQQQAAELQHAIELQSRRLMGLQL 475
>gi|414866609|tpg|DAA45166.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 317
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 201/353 (56%), Gaps = 57/353 (16%)
Query: 307 MNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLI 366
MNP +RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLI
Sbjct: 2 MNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLI 61
Query: 367 LAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSG------PFD 420
LAKGNPHF+CD+RVLVKPYKEKGKV +K ++Q Q G++ S C++P+G PFD
Sbjct: 62 LAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQQ-----GDF-SGCTTPTGGLDARDPFD 115
Query: 421 FH-FGGRMLYN----NQEMLRRKLEEQ---ADLQQAIEMQGRRLMNLQ-LHLKNNHLNHQ 471
H G RML + N+ +LRRKLEEQ A+LQ AIE+Q RRLM LQ L LK
Sbjct: 116 LHQLGARMLQHSNSANELLLRRKLEEQQQAAELQHAIELQSRRLMGLQLLDLKARAAATA 175
Query: 472 FHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQITDHLFHREE 531
+P+P N P E P ESG +
Sbjct: 176 SA--------LPTPIA----NAFASSHPLSTMAVES-PLESG---------------EQL 207
Query: 532 NRTSNHNKNNNSDGNDKEE---KPNSDENDLCDSLEHILPDNLFASPKKSAGGHITVFSS 588
+S + +G DKEE + + D D S EH LPD+ FASP KSA V S
Sbjct: 208 KLSSGFALDGKLNGGDKEESACEASPDAADSDQSGEHNLPDSPFASPTKSAA---LVHDS 264
Query: 589 ASAEVDEKNTSSVTST--NNNTKLPSTSLNMSSLNSCLLQMSRFSSGQGTIGM 639
+A E S V S + L +L + S +S M R SS G +GM
Sbjct: 265 FAATEPENTASCVGSKIDGGSNHLRPPALEIPSPSSYFFPMRRLSSDHGAMGM 317
>gi|255587629|ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
gi|223525472|gb|EEF28048.1| RNA binding protein, putative [Ricinus communis]
Length = 578
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 189/538 (35%), Positives = 277/538 (51%), Gaps = 91/538 (16%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD E+TK+V++RI+ ++PEN SKI+GYLL+QD+ ++EMIRLAF P+ L+++LI KAK+
Sbjct: 1 MDFTESTKVVYNRIQKLEPENVSKIIGYLLLQDHSEREMIRLAFSPDNLIYSLITKAKSD 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLP----PASLSYANVVNGSSCSSTNAAASASESLY 116
L + SA +PS ++ S +P P S + A+ ++ + S A+A +
Sbjct: 61 LGLNKPALSA-PISPSQVNTSPVSDIPLQFTPFSPASAHPISSPAASRRTASAYWDAQVT 119
Query: 117 YSNISNNN----SYASSDIADDFHQFQDHLSFL--DESSELASSTDADHHNHHHLL---- 166
N S SD + ++ Q+H+ FL D+ E A S ++D +++
Sbjct: 120 GDQQQVPNLDFGSPGYSDTVPEDYRLQNHMQFLTLDDQFEFAHSVNSDFSSNYFYSEPAL 179
Query: 167 -----KRSLSLPVHPNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHS-PEAA 220
+RS SLP P K C YF+KG+CK+G C++ H H PE
Sbjct: 180 GPRTNRRSPSLPEFP---------------LKICHYFSKGYCKHGNNCRYVHGHPMPEGF 224
Query: 221 TAA-----------AIVGSPSKLSEFELSQELLLRSKASVQQRKLAAASQFMGSF-PYNK 268
+ V SP L + E+ LL+S+ + ++ AS M + Y K
Sbjct: 225 SQIFSTKSNDFSNDEHVVSPGSLEKLEMELAELLKSRRGM---PVSIASLPMMYYEKYGK 281
Query: 269 CMN---FLNDTQR-----SAALMMGDELHNKFGTCSRP--------------------ER 300
+ +L ++QR + + L N RP ER
Sbjct: 282 TLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRVIDRPHGQHSVILEEDVPKYLEYVGER 341
Query: 301 NDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYP 360
ND G + +RQIYLTFPA+S F E DVS YFS +GPV DVRIP QQKRMFGFVTF++
Sbjct: 342 NDP-GGIVAGSRQIYLTFPAESIFTEHDVSIYFSKFGPVQDVRIPCQQKRMFGFVTFIFV 400
Query: 361 ETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKK-QQQHQQQMERGEYSSACSSPSGPF 419
ETVK ILAKGNPH+VC +RVLVKPY+EK ++ ++K ++ Q M + S P
Sbjct: 401 ETVKQILAKGNPHYVCGARVLVKPYREKSRLIDRKFSEKLQHPMYNSSHFIDGDSELHPM 460
Query: 420 DFHFGGRMLYNNQEMLRRKLEEQADLQQAIEMQGRRLMNLQLHLKNNHLNHQFHHGLS 477
+ +N +LR++L E+ + A+E + RRL L+ HL LNHQ + G S
Sbjct: 461 P------TISDNSRLLRKQLMEEN--EHALEFERRRL--LEFHLGPKSLNHQSYLGCS 508
>gi|297847524|ref|XP_002891643.1| nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297337485|gb|EFH67902.1| nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 413
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 180/464 (38%), Positives = 253/464 (54%), Gaps = 65/464 (14%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD + T ++FS+I+ ++PENASK++GY L+QD +++IR+AFGP++L+ KAK+
Sbjct: 1 MDPGDPTSIIFSKIRTLEPENASKVIGYFLLQDMEQRDLIRIAFGPDSLIQTFCRKAKSD 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L +S S + SLS ++ NG S N + S S + +
Sbjct: 61 LGLSSNGFSRPIN------------IHGQSLSQSSPRNGFLELSRNPSNPLSPSFTSNTL 108
Query: 121 SNNNSYASSDIADDFHQFQ-----DHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVH 175
+N ++ SS + F D S+ + D D + H KRS S
Sbjct: 109 RDNPNFNSSPFRESSSLFASSSGGDEQQQQQFSNNFLFTKDEDPFANFH--KRSFSAN-- 164
Query: 176 PNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEF 235
+ C S++ P G G + F + G F ++A +GSPS E
Sbjct: 165 -DACLESEE-PGFGGGTGY-----HRFPQGGLVDDF---------GSSAGLGSPS---EM 205
Query: 236 ELSQELLLRSKASVQQRKLAAASQFMGSFPYNKCMNFLNDTQRSAALMMGDELHNKFGTC 295
+ E ++R K + Q+R +AA QFM + C + + R + G+E F +
Sbjct: 206 DYMLEEMMRMKLAQQKRMVAA--QFMAA-----CSSPM--LHRQGSGHFGEEGGYYF-SP 255
Query: 296 SRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFV 355
R ER D ++QIYLTFP++S+F +EDVS YFS +GPV DVRIPYQQ+RMFGFV
Sbjct: 256 GRHERED------SVSKQIYLTFPSESSFTDEDVSTYFSDFGPVEDVRIPYQQQRMFGFV 309
Query: 356 TFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQH-QQQMERGEYSSACSS 414
TF ETV+ ILA+GNPHF+CDSRVLVKPYKEKGK+ +K+QQQ + +ERG YS + SS
Sbjct: 310 TFAKAETVRTILARGNPHFICDSRVLVKPYKEKGKILQKRQQQQLHELLERGNYSPS-SS 368
Query: 415 PS-----GPFDFHFGGRMLYN-NQEMLRRKLEEQADLQQAIEMQ 452
PS ++ G RM N QEMLRRK EQADLQQAIE++
Sbjct: 369 PSRMDSRDLYECRLGPRMFSNKTQEMLRRKT-EQADLQQAIEVE 411
>gi|242082672|ref|XP_002441761.1| hypothetical protein SORBIDRAFT_08g001980 [Sorghum bicolor]
gi|241942454|gb|EES15599.1| hypothetical protein SORBIDRAFT_08g001980 [Sorghum bicolor]
Length = 637
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 154/317 (48%), Positives = 195/317 (61%), Gaps = 66/317 (20%)
Query: 192 WKHCLYFAKGFCKNGTACKFHHIHS-PEAATAAAIVGSPSKLSEFELSQELLLRSKASVQ 250
W+ C+YFA+GFCKNG++C+F +H PE AA +E E+ +++R+KA
Sbjct: 163 WRPCMYFARGFCKNGSSCRF--LHGLPEDDDAAT--------AEREM---VVMRAKALAA 209
Query: 251 QRKLAAASQFMGSFPYNKC---------MNFL----------NDTQRSAALMM------- 284
R Q M S +NFL N+ QR+AA
Sbjct: 210 ARSQQQQQQLMASAFPFSPSPSPPKGVNLNFLLHHHNQQQQQNEPQRAAAAAAAAMLLQG 269
Query: 285 --GDELHNKFGTCS-RPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHD 341
GD++H +F S R +R + S P+ARQIYLTFPADSTF EEDVSNYFS+YGPV D
Sbjct: 270 GGGDDMHGRFPVRSPRMDRGELMSS--PAARQIYLTFPADSTFSEEDVSNYFSMYGPVQD 327
Query: 342 VRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEK-KQQQHQ 400
VRIPYQQKRMFGFVTFVY ETVK+IL+KGNPHFVCD+RVLVKPYKEKGKV ++ ++ QH
Sbjct: 328 VRIPYQQKRMFGFVTFVYAETVKIILSKGNPHFVCDARVLVKPYKEKGKVPDRFRKLQHP 387
Query: 401 QQMERGEYSSACSSPSG------PFDF---HFGGRMLY----NNQEMLRRKLEEQ---AD 444
G++ + C+SP+G PFD G RM+Y N++ LRRKLEEQ A+
Sbjct: 388 HH---GDF-AGCTSPTGLLDSRDPFDLQQPQIGPRMMYGNIANHEAFLRRKLEEQHQAAE 443
Query: 445 LQQAIEMQGRRLMNLQL 461
LQQAIE++GRR M L L
Sbjct: 444 LQQAIELEGRRFMGLHL 460
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 64/90 (71%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD++EATK VF R++A+DP+NASKIMG LLIQDN DKE+IRLAFGP+ LLH + A+
Sbjct: 1 MDAWEATKAVFDRVRALDPDNASKIMGLLLIQDNSDKELIRLAFGPDHLLHAFVAAARAD 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPAS 90
L+ +S AS + L ++PW PP S
Sbjct: 61 LAASSKPASPPSPVLGPLHQPASPWGPPPS 90
>gi|168037568|ref|XP_001771275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677364|gb|EDQ63835.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 386
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 154/416 (37%), Positives = 223/416 (53%), Gaps = 60/416 (14%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MDSYEAT++V+ R++A++PE SKIM +LL+Q++G++EM+RLA G L+ +++ KAK
Sbjct: 1 MDSYEATRIVYGRVQALEPETGSKIMLHLLLQEHGEREMVRLALGSNVLIQSVVKKAKKE 60
Query: 61 LSNASASASASATNPSSLSP--SSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYS 118
L + + P +AP P + +GS S+ ++ S + + S
Sbjct: 61 LG---------LEDNRDVMPLQHNAPLYIPDH----DFASGSFGSNVLSSPSLHDQM--S 105
Query: 119 NISNNNSYASSDIADDFHQFQDHL-----SFLDESSELASSTDADHHNHHHLLKRSLSLP 173
++S+ + D + H F DH +FL+ S E H SL
Sbjct: 106 SLSD-----AFDRQNSLHAFYDHYYPETYAFLNSSKEFL---------HSRSSSSRASLA 151
Query: 174 VHPNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHH----------IHSPEAATAA 223
V + S D L WK CLYFA+G+CK+G++C+F H + E
Sbjct: 152 VDSS----SSPDLGPALAWKPCLYFARGYCKHGSSCRFLHGMDDGMAPGSLERLEIELQE 207
Query: 224 AIVGSPSKLSEFELSQELLLRSKASVQQRKLAAASQFMGSFPYN--KCMNFLNDT----- 276
+ G + +S L Q R ++Q SQ G Y+ K + L +T
Sbjct: 208 LLRGRRAPVSIASLPQLYYERFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNTVTLID 267
Query: 277 --QRSAALMMGDELHNKFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFS 334
A+++ ++ H +F R + +NPS+RQIYLTFPA+STF EEDV+ +F
Sbjct: 268 RPHGQHAVVLAEDAH-RFTAYRSDHRGEDLSGINPSSRQIYLTFPAESTFTEEDVTAHFR 326
Query: 335 IYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGK 390
YGPV DVRIPYQQKRMFGFVTFVY ETVK IL++GNPH++C +RVLVKPY+EKGK
Sbjct: 327 AYGPVQDVRIPYQQKRMFGFVTFVYSETVKAILSEGNPHYICGARVLVKPYREKGK 382
>gi|168011119|ref|XP_001758251.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690707|gb|EDQ77073.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 421
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 156/435 (35%), Positives = 227/435 (52%), Gaps = 63/435 (14%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MDSYEAT++V+ R++A++PE SKIM +LL+Q++G++EM+RLA G L+ +++ KAK
Sbjct: 1 MDSYEATRIVYGRVQALEPETGSKIMLHLLLQEHGEREMLRLALGSNVLMQSVVKKAKKE 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L S S P P AP P +A+ GS+ ++ +
Sbjct: 61 LG---LDDSRSVMPPLQKRP--APLYIPDH-EFASGGFGSNVLTSPGLLDQVKLATIQQQ 114
Query: 121 SNNNSYASSDIADDFHQFQDHLSFL----DESSELASSTDADHHNHHHLLKRSLSLPVH- 175
+N + + DHLS L D+ + L TD + + + L S + +H
Sbjct: 115 HHNQLFLQDQLP-----LHDHLSLLSDAVDQQNSLRVYTDHYYPDTYAFLNSSKEI-LHS 168
Query: 176 --------PNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVG 227
P V S D L WK CLYFA+G+CK+G++C+ SP ++ +
Sbjct: 169 RSSSSRASPIVDSSSPPDLGPTLAWKPCLYFARGYCKHGSSCR-----SPASSNGHRELR 223
Query: 228 -----SPSKLSEFELSQELLLRSK------------------ASVQQRKLAAASQFMGSF 264
+P L E+ + LLR + ++Q SQ G
Sbjct: 224 VDDGMAPGSLERLEIELQELLRGRRAPVSIASLPQLYYERFGKTLQAEGYLTESQRHGKA 283
Query: 265 PYN--KCMNFLNDT-------QRSAALMMGDELHNKFGTCSRPERNDFFGSMNPSARQIY 315
Y+ K + L +T A+++ ++ H +F R + +NPS+RQIY
Sbjct: 284 GYSLTKLLARLKNTVTLIDRPHGQHAVVLAEDAH-RFTVHRSDHRGEDLSGINPSSRQIY 342
Query: 316 LTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFV 375
LTFPA+STF EEDV+++F YGPV DVRIPYQQKRMFGFVTFVY ETVK IL++GNPH++
Sbjct: 343 LTFPAESTFCEEDVTSHFRAYGPVQDVRIPYQQKRMFGFVTFVYSETVKAILSEGNPHYI 402
Query: 376 CDSRVLVKPYKEKGK 390
C +RVLVKPY+EKGK
Sbjct: 403 CGARVLVKPYREKGK 417
>gi|30695000|ref|NP_849792.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332194556|gb|AEE32677.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 513
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 208/598 (34%), Positives = 292/598 (48%), Gaps = 116/598 (19%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD + T ++FS+I+ + ENAS+++ Y L+QD +++IR+AFGP++L+ KAK
Sbjct: 1 MDPGDPTSIIFSKIRTFELENASRVIDYFLLQDMEQRDLIRIAFGPDSLIQTFCQKAKVD 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L +S S + SLS ++ NG S N + S SL + +
Sbjct: 61 LGFSSNGFSRPIN------------IHGQSLSSSSPRNGFLEFSRNPSNPLSSSLTLNTL 108
Query: 121 SNNN-SYASSDIADDFHQFQ----DHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVH 175
+N ++ SS + F D S+ + D D + H KRS S
Sbjct: 109 RDNKPNFNSSPFRESSSLFASSSGDEQQQQQFSNNFLFTNDEDPFANSH--KRSFSAN-- 164
Query: 176 PNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEF 235
+ CF S++ P G G C F +G +G ++ + GSPS E
Sbjct: 165 -DACFESEE-PWFG-GGNGCHQFPQGGLVDGFG-------------SSGVFGSPS---EM 205
Query: 236 ELSQELLLRSKASVQQRKLAAASQFMGSFPYNKCMNFLNDTQRSAALMMGDELHNKFGTC 295
+ E ++R K + Q+K A+QFM + C + + R + G+E N F +
Sbjct: 206 DYMLEGMMRMK--LAQQKSMVAAQFMAA-----CGSPM--LHRHGSGHFGEECGNYF-SQ 255
Query: 296 SRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFV 355
R ER D ++QIYLTFP++S+F +EDVS YF +G V DVRIPYQQ+RM+GFV
Sbjct: 256 GRHERED------SVSKQIYLTFPSESSFTDEDVSTYFRDFGLVDDVRIPYQQQRMYGFV 309
Query: 356 TFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQH-QQQMERGEYSSACSS 414
TF ETV+ ILA+GNPHF+CDSRVLVKPYKEKGK+ +K+QQQ + +ERG YS + SS
Sbjct: 310 TFAKAETVRTILARGNPHFICDSRVLVKPYKEKGKILQKRQQQQLHELLERGNYSPS-SS 368
Query: 415 PSGP-----FDFHFGGRML-YNNQEMLRRKLEEQADLQQAIEMQGRRLMNLQLHLKNNHL 468
PSG ++ G RM QEMLRRK EQADLQ AIE
Sbjct: 369 PSGKDSRELYECRLGPRMFSKKTQEMLRRKT-EQADLQHAIE------------------ 409
Query: 469 NHQFHHGLSNGSPIPSPTLSHSPN--NRTRIFPFEGSDEEVPPEESGVSPVTDSQITDHL 526
S GSP SH P N + +F ++EE+ +S S Q+
Sbjct: 410 -----RSPSIGSP------SHFPPRFNHSLLFQSGNNNEEIMEGDSDRSEKDLQQVA--- 455
Query: 527 FHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSAGGHIT 584
TSN + N+ +E SLE+ LPD+LF SPKKS + T
Sbjct: 456 -------TSNEERGYNNGFYKGQET----------SLENTLPDSLFGSPKKSGETYQT 496
>gi|302796663|ref|XP_002980093.1| hypothetical protein SELMODRAFT_112009 [Selaginella moellendorffii]
gi|300152320|gb|EFJ18963.1| hypothetical protein SELMODRAFT_112009 [Selaginella moellendorffii]
Length = 394
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 156/423 (36%), Positives = 217/423 (51%), Gaps = 58/423 (13%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEAT+LVF+R++A DPEN SKI+G +L+QD ++EM RLA G + LL + I KA+
Sbjct: 1 MDAYEATQLVFARVQAQDPENVSKIIGLMLLQDRSEQEMARLALGSDALLQSAIAKARRE 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L +A+ ++ S + G + SS+ + +L+ +
Sbjct: 61 LGLFAANPHPGLSDQHHHHRQHHHQQRINRPSLLFIPEGGTVSSSPS------NLFQPSP 114
Query: 121 SNNNSYASSDIADDFHQFQDHLS-FLDESSELASSTD--ADHHNHHHLLKRSLSLPVHPN 177
S + + + HQFQ H L +S ++S+ AD H L P
Sbjct: 115 SPDEFATDQWLLNHNHQFQLHQDPLLKNTSRFSTSSSPAADAQRRH------LQQLQFPA 168
Query: 178 VCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFEL 237
+ S D L K CLY++KG CK GT+C+ SP + + L E+
Sbjct: 169 SHYPSSHDLAMALTCKPCLYYSKGHCKRGTSCR-----SPSSGS----------LERLEM 213
Query: 238 SQELLLRSK------ASVQQ-------RKLAAASQFMGSFPYNKC----MNFLNDTQRSA 280
+ LLR + AS+ Q R L A S + K L + S
Sbjct: 214 ELQELLRGRRTPVSIASLPQLYFEKFGRALQAQGYLTESQRHGKAGCSLTKLLARLKGSV 273
Query: 281 ALMMGDELHNKFGTCSRPERNDFFG---------SMNPSARQIYLTFPADSTFREEDVSN 331
AL+ D H + + F G +NPS+RQIYLTFPA+STF E+DVS
Sbjct: 274 ALI--DRPHGQHAVVLAEDAQRFVGYRADRDDLKDVNPSSRQIYLTFPAESTFTEDDVSA 331
Query: 332 YFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKV 391
+F YGPV DVRIPYQQKRMFGFVTF+YPETVK IL++GNPH++C +RVLVKPY+EK K+
Sbjct: 332 HFRSYGPVQDVRIPYQQKRMFGFVTFIYPETVKAILSEGNPHYICGARVLVKPYREKAKL 391
Query: 392 QEK 394
E+
Sbjct: 392 GER 394
>gi|15217946|ref|NP_175563.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|12325355|gb|AAG52614.1|AC024261_1 unknown protein; 33958-32214 [Arabidopsis thaliana]
gi|20268750|gb|AAM14078.1| unknown protein [Arabidopsis thaliana]
gi|21281143|gb|AAM45048.1| unknown protein [Arabidopsis thaliana]
gi|332194555|gb|AEE32676.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 414
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 176/467 (37%), Positives = 250/467 (53%), Gaps = 65/467 (13%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD + T ++FS+I+ + ENAS+++ Y L+QD +++IR+AFGP++L+ KAK
Sbjct: 1 MDPGDPTSIIFSKIRTFELENASRVIDYFLLQDMEQRDLIRIAFGPDSLIQTFCQKAKVD 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L +S S + SLS ++ NG S N + S SL + +
Sbjct: 61 LGFSSNGFSRPIN------------IHGQSLSSSSPRNGFLEFSRNPSNPLSSSLTLNTL 108
Query: 121 SNNN-SYASSDIADDFHQFQ----DHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVH 175
+N ++ SS + F D S+ + D D + H KRS S
Sbjct: 109 RDNKPNFNSSPFRESSSLFASSSGDEQQQQQFSNNFLFTNDEDPFANSH--KRSFSAN-- 164
Query: 176 PNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEF 235
+ CF S++ P G G C F +G +G ++ + GSPS E
Sbjct: 165 -DACFESEE-PWFG-GGNGCHQFPQGGLVDGFG-------------SSGVFGSPS---EM 205
Query: 236 ELSQELLLRSKASVQQRKLAAASQFMGSFPYNKCMNFLNDTQRSAALMMGDELHNKFGTC 295
+ E ++R K + Q+K A+QFM + C + + R + G+E N F +
Sbjct: 206 DYMLEGMMRMK--LAQQKSMVAAQFMAA-----CGSPM--LHRHGSGHFGEECGNYF-SQ 255
Query: 296 SRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFV 355
R ER D ++QIYLTFP++S+F +EDVS YF +G V DVRIPYQQ+RM+GFV
Sbjct: 256 GRHERED------SVSKQIYLTFPSESSFTDEDVSTYFRDFGLVDDVRIPYQQQRMYGFV 309
Query: 356 TFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQH-QQQMERGEYSSACSS 414
TF ETV+ ILA+GNPHF+CDSRVLVKPYKEKGK+ +K+QQQ + +ERG YS + SS
Sbjct: 310 TFAKAETVRTILARGNPHFICDSRVLVKPYKEKGKILQKRQQQQLHELLERGNYSPS-SS 368
Query: 415 PSGP-----FDFHFGGRML-YNNQEMLRRKLEEQADLQQAIEMQGRR 455
PSG ++ G RM QEMLRRK EQADLQ AIE++ +R
Sbjct: 369 PSGKDSRELYECRLGPRMFSKKTQEMLRRKT-EQADLQHAIEVELQR 414
>gi|240255377|ref|NP_188747.5| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332642939|gb|AEE76460.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 296
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 193/312 (61%), Gaps = 44/312 (14%)
Query: 308 NPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLIL 367
N +++QIYLTFPADS+F +EDVSNYF +GPV DVRIPYQQKRMFGFVTF++ ETV++IL
Sbjct: 8 NSASKQIYLTFPADSSFTDEDVSNYFGNFGPVQDVRIPYQQKRMFGFVTFLHSETVRIIL 67
Query: 368 AKGNPHFVCDSRVLVKPYKEKGKVQEKK-QQQHQQQMERGEYSSACSSPSGP-----FDF 421
A+GNPHF+CDSRVLVKPYKEKG++ EK+ QQQ QQMERG +S SSPSG FD
Sbjct: 68 ARGNPHFICDSRVLVKPYKEKGRILEKRQQQQLLQQMERGNFSPG-SSPSGMDSRDLFDS 126
Query: 422 HFGGRMLYNNQEMLRRKLEEQADLQQAIEMQGRRLMNLQLHLKNNH--LNHQFHHGLSNG 479
H RM N QEM+RRK EQADLQQAIE Q RR ++LQL ++ L+HQ LS G
Sbjct: 127 HLAPRMFSNTQEMMRRKA-EQADLQQAIEFQRRRFLSLQLPDMDSESFLHHQ--RSLSIG 183
Query: 480 SPIP-SPTLSHSPNNR---TRIFPFEGSDEEVPPEESGVSPVTDSQITDHLFHREENRTS 535
SP+ SP ++ S R T FEG+ + E+ + ++D T H +E S
Sbjct: 184 SPVHFSPRVNQSMLFRSESTSDEVFEGNGDSGHQSEATRAFLSD---TGHNISQERGYNS 240
Query: 536 NHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSAGGHITVFSSASAEVDE 595
+ NK + SLE+ LPD+ FASP K+ + E ++
Sbjct: 241 HLNKGQET------------------SLENTLPDSFFASPSKTG-------ETQHPEFEK 275
Query: 596 KNTSSVTSTNNN 607
+N ++++ T N
Sbjct: 276 ENCATISVTTEN 287
>gi|356527124|ref|XP_003532163.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Glycine max]
Length = 555
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 177/513 (34%), Positives = 264/513 (51%), Gaps = 78/513 (15%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD E T++VF ++ +PENA+KI+GYLL+QD+G+++M++LA P+ L+ ++ +KA+T
Sbjct: 1 MDISEYTRIVFDKLHRFEPENATKIIGYLLLQDHGEQDMVKLASLPDHLIRDVAYKARTE 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSS----TNAAASASESLY 116
L AS SA P SL +S LS+ +V++ +S + T+ A+ +S Y
Sbjct: 61 LQRL---ASRSAIQPISLPTNSQ-----QCLSHLSVISPTSVITPGTLTSPASFQVQSPY 112
Query: 117 YSNISNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHP 176
+ S +N+ A +F L ++D SEL T +H S + +
Sbjct: 113 WDPQSASNTNA---------EFM-ALGYVDSISELQKQTPLFSLENHMDTMNSGTAGI-A 161
Query: 177 NVCFGSDDDPNSGLGWKH---------CLYFAKGFCKNGTACKFHHIH-SPEAATAAA-- 224
N +G D S LG K+ C YF KGFCK+G +C+++H +P+ +
Sbjct: 162 NDYYGLDASSASNLGGKNGRFEFPVKTCHYFNKGFCKHGNSCRYYHEQGAPDMFSHMYGN 221
Query: 225 ------IVGSPSKLSEFELSQELLLRSKASVQQRKLAAASQFMGSFP-YNKCMN---FLN 274
V SP L++ E LL+ K + ++ AS M + Y K + +L
Sbjct: 222 DIFNDDQVISPGSLAQLESEIVELLKLK---KGGSISIASLPMAYYDRYKKVLQADGYLT 278
Query: 275 DTQRSA---------------ALMMGDELHNKFGTCSRPERNDFFGSMN-----PSARQI 314
++QR ++ + D H + + F G ++ ++RQI
Sbjct: 279 ESQRHGKSGYSLTKLLARLKNSIRLIDRPHGQHSVVLAEDAPKFNGKVDYAKYISASRQI 338
Query: 315 YLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHF 374
YLTFPADSTF E DVSNYFS +G V DVRIP Q++RMFGFVTF PETVK+IL KGNPH+
Sbjct: 339 YLTFPADSTFSEGDVSNYFSTFGKVEDVRIPSQERRMFGFVTFDDPETVKVILDKGNPHY 398
Query: 375 VCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSA--CSSPSGPFDFHFGGRMLYNNQ 432
VC+SRVLVKPYKEK K+ +K + ++E Y S + P R
Sbjct: 399 VCESRVLVKPYKEKPKLMLRK---NSDRIEHSAYYSPHYVDIDTEPTSIPRSCR----KP 451
Query: 433 EMLRRKLEEQADLQQAIEMQGRRLMNLQLHLKN 465
LRR+L Q + + A+E Q +R LQL K+
Sbjct: 452 RFLRRQLINQQE-EAALEFQRQRFAELQLAQKS 483
>gi|110738379|dbj|BAF01116.1| hypothetical protein [Arabidopsis thaliana]
Length = 297
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 146/313 (46%), Positives = 192/313 (61%), Gaps = 45/313 (14%)
Query: 308 NPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLIL 367
N +++QIYLTFPADS+F +EDVSNYF +GPV DVRIPYQQKRMFGFVTF++ ETV++IL
Sbjct: 8 NSASKQIYLTFPADSSFTDEDVSNYFGNFGPVQDVRIPYQQKRMFGFVTFLHSETVRIIL 67
Query: 368 AKGNPHFVCDSRVLVKPYKEKGKVQEKKQ--QQHQQQMERGEYSSACSSPSGP-----FD 420
A+GNPHF+CDSRVLVKPYKEKG++ E ++ QQ QQMERG +S SSPSG FD
Sbjct: 68 ARGNPHFICDSRVLVKPYKEKGRILENRRQQQQLLQQMERGNFSPG-SSPSGMGSRDLFD 126
Query: 421 FHFGGRMLYNNQEMLRRKLEEQADLQQAIEMQGRRLMNLQLHLKNNH--LNHQFHHGLSN 478
H RM N QEM+RRK EQADLQQAIE Q RR ++LQL ++ L+HQ LS
Sbjct: 127 SHLAPRMFSNTQEMMRRKA-EQADLQQAIEFQRRRFLSLQLPDMDSESFLHHQ--RSLSI 183
Query: 479 GSPIP-SPTLSHSPNNR---TRIFPFEGSDEEVPPEESGVSPVTDSQITDHLFHREENRT 534
GSP+ SP ++ S R T FEG+ + E+ + ++D T H +E
Sbjct: 184 GSPVHFSPRVNQSMLFRSESTSDEVFEGNGDSGHQSEATRAFLSD---TGHNISQERGYN 240
Query: 535 SNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSAGGHITVFSSASAEVD 594
S+ NK + SLE+ LPD+ FASP K+ + E +
Sbjct: 241 SHLNKGQET------------------SLENTLPDSFFASPSKTG-------ETQHPEFE 275
Query: 595 EKNTSSVTSTNNN 607
++N ++++ T N
Sbjct: 276 KENCATISVTTEN 288
>gi|224129150|ref|XP_002320513.1| predicted protein [Populus trichocarpa]
gi|222861286|gb|EEE98828.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 174/507 (34%), Positives = 254/507 (50%), Gaps = 85/507 (16%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD E+TK+V++RI+ I+PE KI+GY+L+Q++G++EMIRLAF P+ L++ I KAK+
Sbjct: 1 MDFSESTKVVYNRIQEIEPEFVGKIIGYILLQNHGEREMIRLAFSPDNLIYATISKAKSD 60
Query: 61 L----SNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLY 116
L + S S NP+ +S ++P ++S + + + + A + Y
Sbjct: 61 LGLNKTPVPNPISPSQVNPAPVSDVHLQFIPNTAVSSHPISSPIKIRTAGSFWDAQVTDY 120
Query: 117 YSNISNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHP 176
+ N + +SD +F S+ L T +RS SLP P
Sbjct: 121 --RLQNQMQFLTSDDQLEFVNSDFSSSYFYPEPALGPRTS----------RRSPSLPEFP 168
Query: 177 NVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVG--------- 227
K C YF KGFCK+G C++ H H P + + I+
Sbjct: 169 ---------------VKICHYFNKGFCKHGNNCRYFHGH-PMPESFSQILSLNSNEIAND 212
Query: 228 ----SPSKLSEFELSQELLLRSKASVQQRKLAAASQFMGSF-PYNKCMN---FLNDTQRS 279
SP L + EL LL+S+ V ++ AS M + Y + + +L ++QR
Sbjct: 213 EHFISPGSLEKLELELTELLKSRRGV---PVSIASLPMMYYEKYGRMLQAEGYLTESQRH 269
Query: 280 AA-----LMMGDELHNKFGTCSRP--------------------ERNDFFGSMNPSARQI 314
+ L N RP ERND G + +RQI
Sbjct: 270 GKAGYSLTKLLARLKNSIRLIDRPHGQHSVILTEDVPKYLEYAGERND-PGGIVAGSRQI 328
Query: 315 YLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHF 374
YLTFPA+STF E+DVSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK IL+KGNPH
Sbjct: 329 YLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILSKGNPHH 388
Query: 375 VCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSGPFDFHFGGRMLYNNQEM 434
VC +RVLVKPY+EK ++ ++K + Q + + G + H R+ +N +
Sbjct: 389 VCGARVLVKPYREKSRLVDRKYAEKIQH----PFFYSQHFIDGDSELHSVPRVC-DNSRL 443
Query: 435 LRRKLEEQADLQQAIEMQGRRLMNLQL 461
LR++L E+ + QA+E++ RRL QL
Sbjct: 444 LRKQLMEEHE--QALELERRRLSEFQL 468
>gi|356569657|ref|XP_003553014.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Glycine max]
Length = 552
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 173/518 (33%), Positives = 256/518 (49%), Gaps = 87/518 (16%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD E T++VF +++ +PE+ +KI+GYLL+QD+G++EM++LA P+ L+ + +KA+T
Sbjct: 1 MDISEYTRIVFDKLQRFEPEHTTKIIGYLLLQDHGEQEMVKLASLPDHLIRGVAYKARTE 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSC----SSTNAAASASESLY 116
L +A S++ P S P L++ +V++ +S + T+ A+ +S Y
Sbjct: 61 LQRLAAR--------SAIQPISLPINSQQCLNHLSVISPTSVITPGTPTSPASFQVQSPY 112
Query: 117 YSNISNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHP 176
+ S +N+ A +F L +LD SE T ++H S + +
Sbjct: 113 WDPQSASNTNA---------EFMA-LGYLDSISEFQKQTPLFSLDNHMDTMNSGTAGI-A 161
Query: 177 NVCFGSDDDPNSGLGWKH----------CLYFAKGFCKNGTACKFHHIHSPEAATAAAI- 225
N +G D S LG K+ C YF KGFCK+G +C+++H H +
Sbjct: 162 NDYYGLDASSVSNLGGKNGRRFEFPVKTCHYFNKGFCKHGNSCRYYHEHGVPDMFSHMYG 221
Query: 226 --------VGSPSKLSEFELSQELLLRSKASVQQRKLAAASQFMGSFP-YNKCMN---FL 273
V SP L++ E LL+ K + ++ AS M + Y K + +L
Sbjct: 222 NDTFNDDPVISPGSLAQLESEIVELLKLK---KGGSISIASLPMAYYERYKKVLQAEGYL 278
Query: 274 NDTQRSA---------------ALMMGDELHNKFGTCSRPERNDF-----FGSMNPSARQ 313
++QR ++ + D H + + F +G ++RQ
Sbjct: 279 TESQRHGKSGYSLTKLLARLKNSIRLIDRPHGQHSVVLAEDAPKFNGKVDYGKYISASRQ 338
Query: 314 IYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPH 373
IYLTFPADSTF E DVS YFS +G V DVRIP Q++RMFGFVT PETVK+IL KGNPH
Sbjct: 339 IYLTFPADSTFSEGDVSYYFSTFGKVEDVRIPSQERRMFGFVTLNDPETVKVILDKGNPH 398
Query: 374 FVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSA------CSSPSGPFDFHFGGRM 427
+VC+SRVLVKPYKEK K +K H ++E Y S S P F
Sbjct: 399 YVCESRVLVKPYKEKPKFMPRK---HSDRIEHSAYYSPHYVDIDTEPTSIPRSF------ 449
Query: 428 LYNNQEMLRRKLEEQADLQQAIEMQGRRLMNLQLHLKN 465
N LRR L E+ + + A E Q RR LQ+ K+
Sbjct: 450 --RNPRFLRRLLIEKQE-EAAFEFQRRRFAELQMAQKS 484
>gi|225447594|ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Vitis vinifera]
Length = 572
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 169/526 (32%), Positives = 255/526 (48%), Gaps = 91/526 (17%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD E+TK+V++RI+ ++PEN SKI+GYLL+QD+G+++MIR AF + + LI KAK
Sbjct: 1 MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 60
Query: 61 LSNASASASASATNPSSLSPSSA--------PWLPPASLSYANVVNGSSCSSTNAAASAS 112
L +S A +S +P ++PS P+ P ++ + + G+S
Sbjct: 61 LGLSSKPAVSSPISPPQVNPSPVSDLPLQFTPFSPASARPFPSPRPGNSYWDPQVNGDQQ 120
Query: 113 ESLYYSNISNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHH-------- 164
+ + S + DDF + Q + FL +L +S ++ ++
Sbjct: 121 QVHKLGDFVPQG--YSDSLPDDF-RLQSQIHFLAMEDQLENSVGSEFSGSYYYAEQALNT 177
Query: 165 -LLKRSLSLPVHPNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACK----------FHH 213
+ +RS SLP P K C YF KGFCK+G +C+ F
Sbjct: 178 RISRRSPSLPEFP---------------LKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQ 222
Query: 214 IHSPEA-----------------------ATAAAIVGSPSKLSEFELSQELLLRSKASVQ 250
I SP A + G P ++ L + ++Q
Sbjct: 223 IFSPGANELPNDDHVFPPGSLEKLELELTELLKSRRGCPVSIAS--LPMMYYEKYGRTLQ 280
Query: 251 QRKLAAASQFMGSFPYN--KCMNFLNDTQR-------SAALMMGDELHNKFGTCSRPERN 301
SQ G Y+ K + L ++ R ++++ ++L ER+
Sbjct: 281 AEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNG--ERS 338
Query: 302 DFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPE 361
D G++ S++QIYLTFPADSTF E+DVSNYF+ +GPV DVRIP QQKRMFGFVTFV+ E
Sbjct: 339 DP-GAIVGSSKQIYLTFPADSTFTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAE 397
Query: 362 TVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSGPFDF 421
TVK IL KGNPH++C +RVLVKPY+EK + ++QH S P
Sbjct: 398 TVKQILTKGNPHYICGARVLVKPYREKASSRTVDRRQHPMYYSPHFIDEDSELQSIP--- 454
Query: 422 HFGGRMLYNNQEMLRRKLEEQADLQQAIEMQGRRLMNLQLHLKNNH 467
R+ N++ + +++L E+ + QA+E++ RRL LQL K H
Sbjct: 455 ----RVCDNSRLLRKQQLMEEHE--QALELERRRLSELQLTPKTAH 494
>gi|414882095|tpg|DAA59226.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 379
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 159/403 (39%), Positives = 222/403 (55%), Gaps = 71/403 (17%)
Query: 282 LMMGDELHNKFGTCS-RPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVH 340
L GD++H++F S R +R + S P+ARQIYLTFPADSTF EEDVSNYFS+YGPV
Sbjct: 3 LQGGDDMHSRFPVRSPRMDRGELMSS--PAARQIYLTFPADSTFSEEDVSNYFSMYGPVQ 60
Query: 341 DVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEK-KQQQH 399
DVRIPYQQKRMFGFVTFVY ETVK+IL+KGNPHFVCD+RVLVKPYKEKGKV ++ ++ QH
Sbjct: 61 DVRIPYQQKRMFGFVTFVYAETVKIILSKGNPHFVCDARVLVKPYKEKGKVPDRFRKLQH 120
Query: 400 QQQMERGEYSSACSSPSG------PFDF---HFGGRMLYNN----QEMLRRK---LEEQA 443
G++ + C+SP+G PFD G RM+Y N + LRRK ++ A
Sbjct: 121 PHH---GDF-AGCTSPTGLLDSRDPFDLQQPQIGPRMMYGNVAGHEAFLRRKLEEQQQAA 176
Query: 444 DLQQAIEMQGRRLMNLQLHLKNNHLNHQFHHGLSNGSPIPSPTL----------SHSPNN 493
+LQQAIE++GRR M L L L H HH S+ + + + TL S + N+
Sbjct: 177 ELQQAIELEGRRFMGLHL-LDLKSRGH--HHLGSSPAAMATTTLGQGDDGCKGRSANGND 233
Query: 494 RTRIFPFEGSDEEVPPEESGVSPVTDSQITDHLFHREENRTSNHNKNNNSDGNDKEE-KP 552
F E ++ + P + + + S E ++ + DG+ K+ P
Sbjct: 234 NAVAFHLEDANIQDTPTKMNSNSLAMSGGPAAGAGGEHE---EQQQDGDGDGSPKQAVNP 290
Query: 553 NSDEND-----------LC-----DSLEHILPDNLFASPKKSAGGHITVFSSASAEVDEK 596
+E C +EHILPD+ FASP K++ + ++ S+A++ +
Sbjct: 291 GKEEKTESGPVTATPIVACGFQESGVVEHILPDSPFASPSKASTQNGSIISNAASSL--- 347
Query: 597 NTSSVTSTNNNTKLPSTSLNMSSLNSCLLQMSRFSSGQGTIGM 639
P++++ + +SC Q RFS G IG+
Sbjct: 348 -----------FPPPASTMELPPYSSCFFQAPRFSPGHEAIGL 379
>gi|334186234|ref|NP_001190170.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332646964|gb|AEE80485.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 406
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 145/207 (70%), Gaps = 26/207 (12%)
Query: 257 ASQFMGSFPYN-KCMNFL-NDTQRSAALMMGDELHNKFGTCSRPERNDFFGSMNPSARQI 314
A+QF G +P++ K +N ++ QR+AALMMGD+LH K G RPER D + P++RQI
Sbjct: 101 ANQFTG-YPFSPKGVNLQQSEAQRAAALMMGDDLH-KLGIW-RPERIDLSATACPASRQI 157
Query: 315 YLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHF 374
YLTFPADS FREEDVS+YFS +GPV DVRIPYQQKRMFGFVTF+YPETVK ILAKGNPHF
Sbjct: 158 YLTFPADSIFREEDVSDYFSTFGPVQDVRIPYQQKRMFGFVTFMYPETVKSILAKGNPHF 217
Query: 375 VCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSGPFDFHFGGRMLYNNQEM 434
VC SRVLVKPYKEKGKV +K + + + + DF GGR + + +
Sbjct: 218 VCHSRVLVKPYKEKGKVPDKYRTKPSRDI---------------MDFQLGGRAFHEDL-L 261
Query: 435 LRRKLEEQADLQQAIEMQGRRLMNLQL 461
+R+ EE +A+E+Q RLMNLQL
Sbjct: 262 WKRRFEE-----RALELQSTRLMNLQL 283
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 52/61 (85%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD YEAT++V SRI+ +DP NASKI+G LL+QD+G+KEMIRLAFGP+ LLH++I KAK
Sbjct: 1 MDVYEATRIVLSRIQNLDPANASKIIGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|255576322|ref|XP_002529054.1| RNA binding protein, putative [Ricinus communis]
gi|223531534|gb|EEF33365.1| RNA binding protein, putative [Ricinus communis]
Length = 551
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 230/441 (52%), Gaps = 78/441 (17%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD E T++VF++IK I+PEN +KI+GYLL+QD D+EMI LA P+ ++ ++I+KAK
Sbjct: 1 MDFSEHTRVVFNKIKKIEPENVTKIIGYLLLQDGSDQEMINLAMSPDVVIQDVIYKAKAE 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L+ + ++A+ +PS SP + +++ V + S S + ++ Y+
Sbjct: 61 LNQLALKSAATPLSPSMNSPPAVSEFSSQFRAFSPVSSRSYLSPQHFRVPST---YW--- 114
Query: 121 SNNNSYASSDIADDF--HQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNV 178
S +S + DF +QD ++ L ++ S D L +L P+
Sbjct: 115 ---ESQVASKHSSDFVPMTYQDSMTELQNQAQFLSLED-------QLESVNLGNAGFPSD 164
Query: 179 CFGSDDDPNSGLG-----------------WKHCLYFAKGFCKNGTACKFHH--IHSPEA 219
F SD + LG K C YF KG+CK+G+ C++ H I
Sbjct: 165 LFYSD----AALGSFRARAGRRYSSLNENSMKICHYFNKGYCKHGSNCRYFHGQISDSFP 220
Query: 220 ATAAAI----VGSPSKLSEFELSQELLLRSKASVQQRKLAAASQFMGSF-PYNKCMN--- 271
T AI + SP L + EL LL+S+ + ++ AS M + Y K +
Sbjct: 221 RTFDAINEDQIFSPGSLEKLELEIIELLKSR---KGNPVSIASLPMLYYEKYGKVLQADG 277
Query: 272 FLNDTQRSA---------------ALMMGDELHNKFGTC----------SRPERNDFFGS 306
+L ++QR ++ + D H + +R +RND G
Sbjct: 278 YLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHAVILAEDVPKYMENRGDRNDP-GP 336
Query: 307 MNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLI 366
+ +RQIYLTFPA+STF E+DVSNYF+ +GPV DVRIP QQKRMFGFVTF +TVK+I
Sbjct: 337 IVSGSRQIYLTFPAESTFTEDDVSNYFNKFGPVEDVRIPCQQKRMFGFVTFESADTVKII 396
Query: 367 LAKGNPHFVCDSRVLVKPYKE 387
LAKGNPHFVC++RVLVKPY+E
Sbjct: 397 LAKGNPHFVCNARVLVKPYRE 417
>gi|357459965|ref|XP_003600264.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355489312|gb|AES70515.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 539
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 161/503 (32%), Positives = 248/503 (49%), Gaps = 86/503 (17%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD E T++V +I+ +PE+A+KI+GYLL+QDNG++E+ +LA P+ L+ + KA+T
Sbjct: 11 MDISECTRIVLDKIQRFEPEHATKIIGYLLMQDNGEQEIAKLASFPDNLIREVALKARTE 70
Query: 61 LSNASASASASATN--PSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYS 118
L + + S+ N P+S S P+ + S + G++ T+ A SE+ ++
Sbjct: 71 LQKMATRSVISSGNSSPASFQVHS-PYYNHGNTSPEFMTIGTTEHQTHTALFGSENHHHV 129
Query: 119 NISNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNV 178
+ N+ + D++ + +L + + L + KR ++ P
Sbjct: 130 DSVNSTT-------DNYDCYNYYLEYASAVANLNGK----------ISKRFSNMTEFP-- 170
Query: 179 CFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHH-----------IHSPEAATAAAIVG 227
+K C YF+KG+C++G +C+F+H ++ +AA
Sbjct: 171 -------------FKTCHYFSKGYCRHGNSCRFYHHGQAVSDIVSHMYGNDAAANDEQAI 217
Query: 228 SPSKLSEFELSQELLLRSKASVQQRKLAAASQFMGSF-PYNKCMN---FLNDTQRSA--- 280
SP L++ E LL+ + + ++ AS M + Y K + +L ++QR
Sbjct: 218 SPGSLAQLESEIVDLLKQRGN----PISIASLPMAYYDKYKKVLQAEGYLAESQRHGKSG 273
Query: 281 ------------ALMMGDELHNKFGTCSRPERNDFFGSMN----PSARQIYLTFPADSTF 324
++ + D H + + F G + +++QIYLTFPADSTF
Sbjct: 274 YNLTKLLIRLRNSIRLIDRPHGQHAVVLAEDAPKFMGKADCQNISASQQIYLTFPADSTF 333
Query: 325 REEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKP 384
EEDVSNYF +G V DVRIP QQ+RMFGFVTFV PETVK+IL KGNPH+V SRVLVKP
Sbjct: 334 SEEDVSNYFGTFGSVEDVRIPCQQRRMFGFVTFVEPETVKMILDKGNPHYVRGSRVLVKP 393
Query: 385 YKEKGKVQEKKQQQHQQQMERGEYSSACSSPS-GPFDFHFGG--RMLYNNQEMLRRKLEE 441
YKEK K+ ++K + C SP D R N + + R LEE
Sbjct: 394 YKEKPKLIDRKYPYRVEH-------HVCYSPRYADIDAEIASSPRSCGNPRYLTRLLLEE 446
Query: 442 QADLQQAIEMQGRRLMNLQLHLK 464
Q + E+Q RRL LQ+ K
Sbjct: 447 Q---DRIFELQRRRLALLQIAQK 466
>gi|79316196|ref|NP_001030921.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|79456990|ref|NP_191904.2| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|46518429|gb|AAS99696.1| At3g63450 [Arabidopsis thaliana]
gi|332646962|gb|AEE80483.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332646963|gb|AEE80484.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 404
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 119/208 (57%), Positives = 144/208 (69%), Gaps = 30/208 (14%)
Query: 257 ASQFMGSFPYN-KCMNFL-NDTQRSAALMMGDELHNKFGTCSRPERNDFFGSMNPSARQI 314
A+QF G +P++ K +N ++ QR+AALMMGD+LH K G RPER D + P++RQI
Sbjct: 101 ANQFTG-YPFSPKGVNLQQSEAQRAAALMMGDDLH-KLGIW-RPERIDLSATACPASRQI 157
Query: 315 YLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHF 374
YLTFPADS FREEDVS+YFS +GPV DVRIPYQQKRMFGFVTF+YPETVK ILAKGNPHF
Sbjct: 158 YLTFPADSIFREEDVSDYFSTFGPVQDVRIPYQQKRMFGFVTFMYPETVKSILAKGNPHF 217
Query: 375 VCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSGPF-DFHFGGRMLYNNQE 433
VC SRVLVKPYKEKGKV +K + PS DF GGR + +
Sbjct: 218 VCHSRVLVKPYKEKGKVPDK------------------TKPSRDIMDFQLGGRAFHEDL- 258
Query: 434 MLRRKLEEQADLQQAIEMQGRRLMNLQL 461
+ +R+ EE +A+E+Q RLMNLQL
Sbjct: 259 LWKRRFEE-----RALELQSTRLMNLQL 281
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 52/61 (85%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD YEAT++V SRI+ +DP NASKI+G LL+QD+G+KEMIRLAFGP+ LLH++I KAK
Sbjct: 1 MDVYEATRIVLSRIQNLDPANASKIIGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|224068839|ref|XP_002302838.1| predicted protein [Populus trichocarpa]
gi|222844564|gb|EEE82111.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 156/429 (36%), Positives = 219/429 (51%), Gaps = 73/429 (17%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD E+TK+V++RI+AI+PE KI+GY+LIQ++G++EMIRLAF P+ L++ +I KAK+
Sbjct: 1 MDFSESTKVVYNRIQAIEPEFVGKIIGYILIQNHGEREMIRLAFSPDNLIYAMICKAKSD 60
Query: 61 LSNASASA----SASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLY 116
L S S NPS +S ++P +++S + + + + E
Sbjct: 61 LGLNKIPVLNLISPSQVNPSPVSDVPQQFIPNSTVSSHPIFSPVKVRTAGYSEMVPEDY- 119
Query: 117 YSNISNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHP 176
I N + + D +F S++ L+ T +RS SLP P
Sbjct: 120 --RIQNQMQFLALDDPIEFVNSDFSSSYIYPEPALSPRTS----------RRSPSLPEFP 167
Query: 177 NVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACK--FHHIHSPEAATAAAIVGSPSKLSE 234
K C YF KGFCK+G C + I + E V SP +
Sbjct: 168 ---------------VKICHYFIKGFCKHGNNCSSNLNEIANEE------FVVSPGSFEK 206
Query: 235 FELSQELLLRSKASVQQRKLAAASQFMGSFP-YNKCMN---FLNDTQR-----SAALMMG 285
EL LL+S+ V ++ AS M + Y + + +L ++QR + +
Sbjct: 207 LELELTELLKSRRGV---PVSIASLPMMYYEMYGRTLQAEGYLTESQRHGKAGYSLTKLL 263
Query: 286 DELHNKFGTCSRP--------------------ERNDFFGSMNPSARQIYLTFPADSTFR 325
L N RP ERND G + +RQIYLTFPA+STF
Sbjct: 264 ARLKNSIRLIDRPHGQHSVILAEDFPKYLEYAGERNDP-GGIVAGSRQIYLTFPAESTFT 322
Query: 326 EEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPY 385
E+DVSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAKGNPH +C +RVLVKPY
Sbjct: 323 EQDVSNYFSNFGPVQDVRIPCQQKRMFGFVTFVFAETVKKILAKGNPHHICGARVLVKPY 382
Query: 386 KEKGKVQEK 394
+EK ++ ++
Sbjct: 383 REKSRLIDR 391
>gi|296084999|emb|CBI28414.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 163/509 (32%), Positives = 239/509 (46%), Gaps = 117/509 (22%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD E+TK+V++RI+ ++PEN SKI+GYLL+QD+G+++MIR AF + + LI KAK
Sbjct: 14 MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 73
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L +S A +S +P ++PS S+S + + + + S S YY+
Sbjct: 74 LGLSSKPAVSSPISPPQVNPS-------PSMSQIHFLAMEDQLENSVGSEFSGSYYYAEQ 126
Query: 121 SNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNVCF 180
+ N + +RS SLP P
Sbjct: 127 ALNT---------------------------------------RISRRSPSLPEFP---- 143
Query: 181 GSDDDPNSGLGWKHCLYFAKGFCKNGTACK----------FHHIHSPEA----------- 219
K C YF KGFCK+G +C+ F I SP A
Sbjct: 144 -----------LKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQIFSPGANELPNDDHVFP 192
Query: 220 ------------ATAAAIVGSPSKLSEFELSQELLLRSKASVQQRKLAAASQFMGSFPYN 267
+ G P ++ L + ++Q SQ G Y+
Sbjct: 193 PGSLEKLELELTELLKSRRGCPVSIAS--LPMMYYEKYGRTLQAEGYLTESQRHGKAGYS 250
Query: 268 --KCMNFLNDTQR-------SAALMMGDELHNKFGTCSRPERNDFFGSMNPSARQIYLTF 318
K + L ++ R ++++ ++L ER+D G++ S++QIYLTF
Sbjct: 251 LTKLLARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNG--ERSDP-GAIVGSSKQIYLTF 307
Query: 319 PADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDS 378
PADSTF E+DVSNYF+ +GPV DVRIP QQKRMFGFVTFV+ ETVK IL KGNPH++C +
Sbjct: 308 PADSTFTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHYICGA 367
Query: 379 RVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSGPFDFHFGGRMLYNNQEMLRRK 438
RVLVKPY+EK + ++QH S P R+ N++ + +++
Sbjct: 368 RVLVKPYREKASSRTVDRRQHPMYYSPHFIDEDSELQSIP-------RVCDNSRLLRKQQ 420
Query: 439 LEEQADLQQAIEMQGRRLMNLQLHLKNNH 467
L E+ + QA+E++ RRL LQL K H
Sbjct: 421 LMEEHE--QALELERRRLSELQLTPKTAH 447
>gi|302767304|ref|XP_002967072.1| hypothetical protein SELMODRAFT_439924 [Selaginella moellendorffii]
gi|300165063|gb|EFJ31671.1| hypothetical protein SELMODRAFT_439924 [Selaginella moellendorffii]
Length = 502
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 144/423 (34%), Positives = 217/423 (51%), Gaps = 49/423 (11%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD YE T+++++R++A+DP + SKI+GYLL+QD +++M+R+A G + LL +++ KAK
Sbjct: 1 MDPYELTRMLYARVQALDPRHVSKIIGYLLLQDEAEQDMLRMALGSDALLFSVVDKAKQE 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLS----------------YANVVNGSSCSS 104
L S S +A +P+ P S P PP Y + S
Sbjct: 61 L-GLSPSPNAHFDHPA---PFSRPEHPPFHFGTAFDHQLQSTYHLRDVYHPPLVNSHVPF 116
Query: 105 TNAAASASESLYYSNISNNNSYASSDIADDF---HQFQDHLSFLDESSELASSTDADHHN 161
+E + +I + + A F H + + +FL+ + +
Sbjct: 117 QKQLQQQAELMNRPSIQDTYQHQPLFGAGVFPNDHFYPETFAFLNRNRLKQQKQQQQKSD 176
Query: 162 HHHLLKRSLSLPVHPNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAAT 221
H L+ LSL H + S NS WK C+Y+++G CK+G+ C+F +H+P +
Sbjct: 177 EHDLM---LSLSEHGSPNSSSSSSNNSSHAWKPCVYYSRGHCKHGSGCRF--LHTPNSLG 231
Query: 222 AAAIVGSPSKLSEFELSQELLLRSKASVQQRKLAAASQFMGSFPYNKCMNFLNDTQRSAA 281
G+ S L EL + LLR+ RK + + + + L+ +
Sbjct: 232 IEEH-GTESALERLELEIQELLRA------RKSPVPISLLPQMYFEEFGSALHVDGKPID 284
Query: 282 LMMGDELHNKFGTCSRPERNDFFGSMNPSARQ----IYLTFPADSTFREEDVSNYFSIYG 337
L+ +C R + + P+ +Q IYLTFPA+S F EEDV+ +FS YG
Sbjct: 285 LLSSP-------SCMRLTSSSL---LRPNGQQAVVLIYLTFPAESAFTEEDVNAHFSAYG 334
Query: 338 PVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQ 397
PV DVRIPYQQKRMFGFVTF++ ETVK ILA+GNPH+VC +RVLVKPY++K K +KK
Sbjct: 335 PVQDVRIPYQQKRMFGFVTFIHAETVKTILAEGNPHYVCGARVLVKPYRDKVKYTDKKNA 394
Query: 398 QHQ 400
Q
Sbjct: 395 DQQ 397
>gi|357494859|ref|XP_003617718.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355519053|gb|AET00677.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 547
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 166/507 (32%), Positives = 244/507 (48%), Gaps = 78/507 (15%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD E T++VF +I+ +PENA KI+GYLL+QDNG++EM RLA P+ ++ ++FKA
Sbjct: 1 MDISEYTRIVFDKIQKFEPENARKIIGYLLLQDNGEQEMARLASCPDHIIGEVVFKA--- 57
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L + +++ P +++P PA LS ++ +N SS S S +
Sbjct: 58 LQMLAVNSTMMPIPPPNVNPQQGLSHFPA-LSPSSPLNFQVPSSYWDPQSTSNA------ 110
Query: 121 SNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPN--- 177
N + + D + Q L + +H +H + R L + + N
Sbjct: 111 --NPEFTGMNYMDSLVELQKQTQLL---------SLENHLDHVNTGTRGLVVNEYNNGLD 159
Query: 178 ---VCFGSD------DDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSP----------- 217
V FG + S K C YF+KG+C++G C++ H P
Sbjct: 160 SSAVNFGGKATKRFSNSSMSEFPLKICHYFSKGYCRHGGNCRYFHGQVPHESFSHMHGNN 219
Query: 218 EAATAAAIVGSPSKLSEFELSQELLLRSKASVQQRKLAAASQFMGSF-PYNKCMN---FL 273
+ + V SP L++ E LL+ + + ++ AS M + Y K + +L
Sbjct: 220 DNTSNEDPVISPGSLAQIESEIIELLKQR---RGNPMSIASLPMAYYDKYKKVLQAHGYL 276
Query: 274 NDTQRSA--------------ALMMGDELHNKFGTCSRPERNDFF----GSMNPSA-RQI 314
++QR ++ + D H + + + N SA RQI
Sbjct: 277 TESQRHGKSGYSLTKLLARLNSIRLIDRPHGQHAVVLAEDAPKYIQKGDSVQNISASRQI 336
Query: 315 YLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHF 374
YLTFPADSTF EEDV+ YF+ +G V DVRIP QQKRMFGFVTF PETV++IL KGNPH+
Sbjct: 337 YLTFPADSTFTEEDVAEYFNAFGYVEDVRIPCQQKRMFGFVTFADPETVRMILDKGNPHY 396
Query: 375 VCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSGPFDFHFGGRMLYNNQEM 434
V SRVLVKPY+EK KV E+ + G Y S + R N++ +
Sbjct: 397 VRGSRVLVKPYREKTKVVERIESWFV-----GSYDPTSHGTSIVLRLYSVPRSYGNHRSL 451
Query: 435 LRRKLEEQADLQQAIEMQGRRLMNLQL 461
R+ +EEQ +QA E+Q RRL LQ
Sbjct: 452 SRQLMEEQ---EQAFELQRRRLAQLQF 475
>gi|225460759|ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
vinifera]
gi|297737542|emb|CBI26743.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 174/516 (33%), Positives = 249/516 (48%), Gaps = 83/516 (16%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD E+T +VF+RI+ ++PEN SKI+GYLL++ EMIRLAFGP+ + +I K
Sbjct: 1 MDFSESTAVVFNRIQKLEPENVSKIIGYLLVKGFSKGEMIRLAFGPDKAIRMIIEGVKIE 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L S + + LSPS+ W P +S S N A+E L
Sbjct: 61 LGLIPNPPSPISPHFPPLSPSTGSWFPSSSPSPVN----------RYLQHATEQL----- 105
Query: 121 SNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNVCF 180
+ S S + + Q + + L S + A +LS+ P
Sbjct: 106 PKDYSLQSQPLGLEEQLEQVNPAILGVSGDYYYPETA---------VENLSVRTGPRSLI 156
Query: 181 GSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHS-PEAATAAA-------IVGSPSKL 232
GS+ K C YF KGFCK+G C++ H PE + A + SP +
Sbjct: 157 GSE------FPVKVCHYFNKGFCKHGNNCRYLHAQVFPEVLSPIANDLANDDHIFSPGSI 210
Query: 233 SEFELSQELLLRSKASVQQRKLAAASQFMGSFP-YNKCM---NFLNDTQRSA-------- 280
+ EL LL+S+ + ++ AS M + Y + + +L ++QR
Sbjct: 211 EKLELELTELLKSR---RGNPVSIASLPMMYYERYGRGLQAEGYLTESQRHGKAGYSLTK 267
Query: 281 ------ALMMGDELHNKFGTC----------SRPERNDFFGSMNPSARQIYLTFPADSTF 324
+ + D H + SR ER+D G + +RQIYLTFPA+STF
Sbjct: 268 LLARLRTIRLIDRPHGQHSVILAEDVPKYMESRSERSDP-GPIVSGSRQIYLTFPAESTF 326
Query: 325 REEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKP 384
EEDVS+YFS +G V DVRIP QQKRMFGFVTF +TVK ILAKG+PH+VC +RVLVKP
Sbjct: 327 TEEDVSDYFSTFGLVEDVRIPCQQKRMFGFVTFDSSDTVKSILAKGSPHYVCGARVLVKP 386
Query: 385 YKEKGKVQEKKQQQHQQQMERGEYSSACSSPSGPFDFHFGGRMLYNNQE---MLRRKLEE 441
Y+EK + ++K + ++ S+ P D M+ E +LR+++ E
Sbjct: 387 YREKPRTGDRKYLE--------KFESSMYYPLQYADMDSELHMMPRGMETSRLLRKQIME 438
Query: 442 QADLQQAIEMQGRRLMNLQLHLKNNHLNHQFHHGLS 477
+ + Q +E + RRL LQ L N L +Q HHG S
Sbjct: 439 EQEFAQDLEFETRRLSKLQ--LARNPLANQLHHGYS 472
>gi|147832355|emb|CAN64426.1| hypothetical protein VITISV_022456 [Vitis vinifera]
Length = 556
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 174/516 (33%), Positives = 249/516 (48%), Gaps = 83/516 (16%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD E+T +VF+RI+ ++PEN SKI+GYLL++ EMIRLAFGP+ + +I K
Sbjct: 1 MDFSESTAVVFNRIQKLEPENVSKIIGYLLVKGFSKGEMIRLAFGPDKAIRMIIEGVKIE 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L S + + LSPS+ W P +S S N A+E L
Sbjct: 61 LGLIPNPPSPISPHFPPLSPSTGSWFPSSSPSPVN----------RYLQHATEQL----- 105
Query: 121 SNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNVCF 180
+ S S + + Q + + L S + A +LS+ P
Sbjct: 106 PKDYSLQSQPLGLEEQLEQVNPAILGVSGDYYYPETA---------VENLSVRTGPRSLI 156
Query: 181 GSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHS-PEAATAAA-------IVGSPSKL 232
GS+ K C YF KGFCK+G C++ H PE + A + SP +
Sbjct: 157 GSE------FPVKVCHYFNKGFCKHGNNCRYLHAQVFPEVLSPIANDLANDDHIFSPGSI 210
Query: 233 SEFELSQELLLRSKASVQQRKLAAASQFMGSFP-YNKCMN---FLNDTQRSA-------- 280
+ EL LL+S+ + ++ AS M + Y + + +L ++QR
Sbjct: 211 EKLELELTELLKSR---RGNPVSIASLPMMYYERYGRGLQAEGYLTESQRHGKAGYSLTK 267
Query: 281 ------ALMMGDELHNKFGTC----------SRPERNDFFGSMNPSARQIYLTFPADSTF 324
+ + D H + SR ER+D G + +RQIYLTFPA+STF
Sbjct: 268 LLARLRTIRLIDRPHGQHSVILAEDVPKYMESRSERSDP-GPIVSGSRQIYLTFPAESTF 326
Query: 325 REEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKP 384
EEDVS+YFS +G V DVRIP QQKRMFGFVTF +TVK ILAKG+PH+VC +RVLVKP
Sbjct: 327 TEEDVSDYFSTFGLVEDVRIPCQQKRMFGFVTFDSSDTVKSILAKGSPHYVCGARVLVKP 386
Query: 385 YKEKGKVQEKKQQQHQQQMERGEYSSACSSPSGPFDFHFGGRMLYNNQE---MLRRKLEE 441
Y+EK + ++K + ++ S+ P D M+ E +LR+++ E
Sbjct: 387 YREKPRTGDRKYSE--------KFESSMYYPLQYADMDSELHMMPRGMETSRLLRKQIME 438
Query: 442 QADLQQAIEMQGRRLMNLQLHLKNNHLNHQFHHGLS 477
+ + Q +E + RRL LQ L N L +Q HHG S
Sbjct: 439 EQEFAQDLEFETRRLSKLQ--LARNPLANQLHHGYS 472
>gi|302785371|ref|XP_002974457.1| hypothetical protein SELMODRAFT_101113 [Selaginella moellendorffii]
gi|300158055|gb|EFJ24679.1| hypothetical protein SELMODRAFT_101113 [Selaginella moellendorffii]
Length = 355
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/415 (33%), Positives = 207/415 (49%), Gaps = 90/415 (21%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD EA + V++R++ +D N KIMGYLL+QD +KEM+ LA ++++ + +AK
Sbjct: 1 MDVEEARRAVYTRVQCLDSANVLKIMGYLLLQDISEKEMLELARSSDSVVEAFVARAKQE 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L S+ ++ +L+ S P L A S+ L +
Sbjct: 61 LGLISSGGGSAGDQ--ALAIDSIPCL---------------------GAEGSQVL---GL 94
Query: 121 SNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNVCF 180
+ + + D++D + S L T ADH + + + P P+
Sbjct: 95 GSQSPVVAQDLSD----------IWERPSYLEKLTRADH-----VAAVNATSPSSPS--- 136
Query: 181 GSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQE 240
WK CLYFA+G+CK+G+AC+ S T +++V S + L E E+ +E
Sbjct: 137 -----------WKPCLYFARGYCKHGSACR-----SSSDLTGSSMVDSLAGL-EAEM-RE 178
Query: 241 LLL--RSKASVQQRKLAAASQFMGSFPYNKCMNFLNDTQR---------------SAALM 283
LL R+ S+ +F S + +L ++QR A +
Sbjct: 179 LLTGRRTPVSIASLPQLYHEKFGKSLQAD---GYLTESQRHGKAGHSLTKLLIKLRATVT 235
Query: 284 MGDELHNKFGTCSRPERNDFFG--------SMNPSARQIYLTFPADSTFREEDVSNYFSI 335
+ D H + + + F + NPS+RQIYLTFPA+S F EEDV+ +FS
Sbjct: 236 LIDRPHGQHAVVLAEDAHKFMAYGQDSSAIAANPSSRQIYLTFPAESGFSEEDVTTHFSS 295
Query: 336 YGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGK 390
+GPV DVRIPYQQKRMFGFVTF Y ETV+ ILA+GNPH++C +RVLVKPYKEKG+
Sbjct: 296 FGPVQDVRIPYQQKRMFGFVTFTYSETVRTILAEGNPHYICGARVLVKPYKEKGR 350
>gi|7573328|emb|CAB87798.1| putative protein [Arabidopsis thaliana]
Length = 399
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/207 (55%), Positives = 142/207 (68%), Gaps = 33/207 (15%)
Query: 257 ASQFMGSFPYN-KCMNFL-NDTQRSAALMMGDELHNKFGTCSRPERNDFFGSMNPSARQI 314
A+QF G +P++ K +N ++ QR+AALMMGD+LH K G RPER D + P++RQI
Sbjct: 101 ANQFTG-YPFSPKGVNLQQSEAQRAAALMMGDDLH-KLGIW-RPERIDLSATACPASRQI 157
Query: 315 YLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHF 374
YLTFPADS FREEDVS+YFS +GPV DVRIPYQQKRMFGFVTF+YPETVK ILAKGNPHF
Sbjct: 158 YLTFPADSIFREEDVSDYFSTFGPVQDVRIPYQQKRMFGFVTFMYPETVKSILAKGNPHF 217
Query: 375 VCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSGPFDFHFGGRMLYNNQEM 434
VC SRVLVKPYKEKGKV +K + + + + DF +L+
Sbjct: 218 VCHSRVLVKPYKEKGKVPDKYRTKPSRDI---------------MDFQLD--LLW----- 255
Query: 435 LRRKLEEQADLQQAIEMQGRRLMNLQL 461
+R+ EE +A+E+Q RLMNLQL
Sbjct: 256 -KRRFEE-----RALELQSTRLMNLQL 276
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 52/61 (85%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD YEAT++V SRI+ +DP NASKI+G LL+QD+G+KEMIRLAFGP+ LLH++I KAK
Sbjct: 1 MDVYEATRIVLSRIQNLDPANASKIIGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|297821268|ref|XP_002878517.1| hypothetical protein ARALYDRAFT_486853 [Arabidopsis lyrata subsp.
lyrata]
gi|297324355|gb|EFH54776.1| hypothetical protein ARALYDRAFT_486853 [Arabidopsis lyrata subsp.
lyrata]
Length = 414
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/214 (54%), Positives = 141/214 (65%), Gaps = 37/214 (17%)
Query: 257 ASQFMGSFPYN-KCMNFLND--TQRSAALMMGDELHNKFGTCSRPERNDFFGSMNPSARQ 313
A QF G +P++ K +N R+AALMMGD+LH K G RPER D P++RQ
Sbjct: 107 AHQFTG-YPFSPKGVNLQQSEAKSRAAALMMGDDLH-KLGRW-RPERIDLSAMACPASRQ 163
Query: 314 IYLTFPADSTFREEDVSNYFSI----YGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAK 369
IYLTFPADS FREEDVS+YFS+ +GPV DVRIP+QQKRMFGFVTF+YP+TVK ILAK
Sbjct: 164 IYLTFPADSIFREEDVSDYFSMVVQYFGPVQDVRIPFQQKRMFGFVTFMYPDTVKSILAK 223
Query: 370 GNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSGPFDFHFGGRMLY 429
GNPHFVCDSRVLVKPYKEKGKV +K + DF GGR +
Sbjct: 224 GNPHFVCDSRVLVKPYKEKGKVPDKYRD--------------------IMDFQLGGRAFH 263
Query: 430 NNQE--MLRRKLEEQADLQQAIEMQGRRLMNLQL 461
+N + + +R+ EE +A+E+Q RLMNLQL
Sbjct: 264 DNTQDLLWKRRFEE-----RALELQSTRLMNLQL 292
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 53/61 (86%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD YEAT++V SRI+++DP NASKIMG LL+QD+G+KEMIRLAFGP+ LLH++I KAK
Sbjct: 1 MDVYEATRVVLSRIQSLDPANASKIMGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|302808135|ref|XP_002985762.1| hypothetical protein SELMODRAFT_122578 [Selaginella moellendorffii]
gi|300146671|gb|EFJ13340.1| hypothetical protein SELMODRAFT_122578 [Selaginella moellendorffii]
Length = 353
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 204/415 (49%), Gaps = 92/415 (22%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD EA + V++R++ +D N KIMGYLL+QD +KEM+ LA ++++ + +AK
Sbjct: 1 MDVEEARRAVYTRVQCLDSANVLKIMGYLLLQDISEKEMLELARSSDSVVEAFVARAKQE 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L S+ ++ + +L+ S P L G+ S S S S+I
Sbjct: 61 LGLISSGGGSA--DDQALAIDSIPCL------------GAEGSQVLGLGSQSPVQDLSDI 106
Query: 121 SNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNVCF 180
SY L T ADH + + + P P+
Sbjct: 107 WERPSY------------------------LEKLTRADH-----VAAVNATSPSSPS--- 134
Query: 181 GSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQE 240
WK CLYFA+G+CK+G+AC+ S T +++V S + L E EL +E
Sbjct: 135 -----------WKPCLYFARGYCKHGSACR-----SSSDLTGSSMVDSLAGL-EAEL-RE 176
Query: 241 LLL--RSKASVQQRKLAAASQFMGSFPYNKCMNFLNDTQR---------------SAALM 283
LL R+ S+ +F S + +L ++QR A +
Sbjct: 177 LLTGRRTPVSIASLPQLYHEKFGKSLQAD---GYLTESQRHGKAGHSLTKLLIKLRATVT 233
Query: 284 MGDELHNKFGTCSRPERNDFFG--------SMNPSARQIYLTFPADSTFREEDVSNYFSI 335
+ D H + + + F + NPS+RQIYLTFPA+S F EEDV+ +FS
Sbjct: 234 LLDRPHGQHAVVLAEDAHKFMAYGQDSSAIAANPSSRQIYLTFPAESGFSEEDVTTHFSS 293
Query: 336 YGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGK 390
+GPV DVRIPYQQKRMFGFVTF Y ETV+ ILA+GNPH++C +RVLVKPYKEKG+
Sbjct: 294 FGPVQDVRIPYQQKRMFGFVTFTYSETVRTILAEGNPHYICGARVLVKPYKEKGR 348
>gi|414866610|tpg|DAA45167.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 292
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 173/326 (53%), Gaps = 57/326 (17%)
Query: 334 SIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQE 393
SIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +
Sbjct: 4 SIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPD 63
Query: 394 KKQQQHQQQMERGEYSSACSSPSG------PFDFH-FGGRMLYN----NQEMLRRKLEEQ 442
K ++Q Q G++ S C++P+G PFD H G RML + N+ +LRRKLEEQ
Sbjct: 64 KYRKQQQ-----GDF-SGCTTPTGGLDARDPFDLHQLGARMLQHSNSANELLLRRKLEEQ 117
Query: 443 ---ADLQQAIEMQGRRLMNLQ-LHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIF 498
A+LQ AIE+Q RRLM LQ L LK +P+P N
Sbjct: 118 QQAAELQHAIELQSRRLMGLQLLDLKARAAATASA--------LPTPIA----NAFASSH 165
Query: 499 PFEGSDEEVPPEESGVSPVTDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPNSDEND 558
P E P ESG + +S + +G DKEE D
Sbjct: 166 PLSTMAVES-PLESG---------------EQLKLSSGFALDGKLNGGDKEESACEASPD 209
Query: 559 LCD---SLEHILPDNLFASPKKSAGGHITVFSSASAEVDEKNTSSVTST--NNNTKLPST 613
D S EH LPD+ FASP KSA V S +A E S V S + L
Sbjct: 210 AADSDQSGEHNLPDSPFASPTKSAA---LVHDSFAATEPENTASCVGSKIDGGSNHLRPP 266
Query: 614 SLNMSSLNSCLLQMSRFSSGQGTIGM 639
+L + S +S M R SS G +GM
Sbjct: 267 ALEIPSPSSYFFPMRRLSSDHGAMGM 292
>gi|356552675|ref|XP_003544688.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Glycine max]
Length = 547
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 248/509 (48%), Gaps = 87/509 (17%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MDS T +VF +I+ +PENA KI+GYL Q +G++EM +LA P+ + + +A+
Sbjct: 1 MDS-PYTSIVFDKIQKFEPENARKIIGYLFFQGHGEQEMAKLASCPDYFIREVAVQARKE 59
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L +A A SL+ + P LS +V++ + +S N S
Sbjct: 60 LQRLAAKPDMLAM---SLTVN-----PQHGLSDLSVISPRTPTSPNFQVPPPYWDPQSAG 111
Query: 121 SNNNSYASSDIADDFHQFQDH---LSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPN 177
+ N + + D + Q L+ ++ + + T ++++ L + +L
Sbjct: 112 NVNPDFMGMNYLDSIVELQKQTQMLTLENQIDAVKTGTGGIANDYYGLDASAANLGGKAG 171
Query: 178 VCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHH----------IHSPEAATAAAIVG 227
F S K C YF KGFCK+GT+C+F+H ++ +A + ++
Sbjct: 172 RRF-------SEFPMKICHYFNKGFCKHGTSCRFYHGQVVPENFSQMYGNDAISEDQVI- 223
Query: 228 SPSKLSEFELSQELLLRSKASVQQRKLAAASQFMGSF-PYNKCM---NFLNDTQRSAA-- 281
SP L++ E LLR+K ++ AS M + Y K + +L ++QR
Sbjct: 224 SPGSLAQLESEIIELLRTKGG----PMSIASLPMAYYDKYKKVLQADGYLTESQRHGKSG 279
Query: 282 ---LMMGDELHNKFGTCSRP----------------ERNDFFGSMNPSARQIYLTFPADS 322
+ L+N RP ++ DF +++ S RQIYLTFPADS
Sbjct: 280 YSLTKLLARLNNSIRLIGRPHGQHSVVLAEDAPTQMQKGDFARNISAS-RQIYLTFPADS 338
Query: 323 TFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLV 382
TF E+DVSNYF+ +GPV DVRIP QQ+RMFGFVTFV+ ETVK +L KGNPH V SRVLV
Sbjct: 339 TFTEDDVSNYFNTFGPVADVRIPNQQRRMFGFVTFVHSETVKTVLDKGNPHCVRGSRVLV 398
Query: 383 KPYKEKGKVQEKKQQQHQQQMERGEYSSACSSP----------SGPFDFHFGGRMLYNNQ 432
KPY+EK KV E+K +R E+ C SP S P F N
Sbjct: 399 KPYQEKAKVNERK------YTDRIEH-PVCYSPHYVDIDTELNSIPRSF--------GNH 443
Query: 433 EMLRRKLE--EQADLQQAIEMQGRRLMNL 459
+RR+L+ E+ + +++E++ R L L
Sbjct: 444 RSIRRQLQLIEEEEQGRSLELKKRSLAQL 472
>gi|356499429|ref|XP_003518543.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Glycine max]
Length = 541
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 148/433 (34%), Positives = 217/433 (50%), Gaps = 63/433 (14%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MDS T++VF +I+ +PE+A KI+GYL Q +G++EM +LA P+ + ++ +AK
Sbjct: 1 MDS-PYTRIVFEKIQKFEPEHARKIIGYLFFQGHGEQEMAKLASCPDYFICEVVVQAKKE 59
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSNI 120
L +A P L P S P LS +V++ + +S N S
Sbjct: 60 LQRLAA-------KPDML-PISRTVNPQQGLSDLSVISPRTPTSPNFQMPPPYWDPQSAA 111
Query: 121 SNNNSYASSDIADDFHQFQDH---LSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPN 177
+ N + + D + Q L+ ++ + + T ++H+ L + +L
Sbjct: 112 NINPDFMGMNYLDSIVELQKQTQMLTLENQIDAVKTGTGGIANDHYGLDASAANL----- 166
Query: 178 VCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHH----------IHSPEAATAAAIVG 227
S K C YF KGFCK+GT+C+F+H +H+ +A ++
Sbjct: 167 -----GGRRFSEFPMKMCHYFNKGFCKHGTSCRFYHGQVVPENFSQMHANDAIGEDQVI- 220
Query: 228 SPSKLSEFELSQELLLRSKASVQQRKLAAASQFMGSF-PYNKCMN---FLNDTQRSAA-- 281
SP L++ E LLR+K ++ AS M + Y K + +L ++QR
Sbjct: 221 SPGSLAQLESEIIELLRAKGG----PMSIASLPMAYYDKYKKVLQADGYLTESQRHGKSG 276
Query: 282 ---LMMGDELHNKFGTCSRP----------------ERNDFFGSMNPSARQIYLTFPADS 322
+ L N RP ++ DF +++ S QIYLTFPADS
Sbjct: 277 YSLTKLLARLKNSIQLIGRPHGQHSVVLAEDSPTQMQKGDFARNISASY-QIYLTFPADS 335
Query: 323 TFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLV 382
TF E+DVSNYF+ +GPV DVRIP QQ+RMFGFVTFV+ ETVK +L KGNPH V SRVLV
Sbjct: 336 TFTEDDVSNYFNTFGPVADVRIPNQQRRMFGFVTFVHSETVKSVLDKGNPHCVRGSRVLV 395
Query: 383 KPYKEKGKVQEKK 395
KPY+EK KV E+K
Sbjct: 396 KPYREKAKVNERK 408
>gi|302755024|ref|XP_002960936.1| hypothetical protein SELMODRAFT_437396 [Selaginella moellendorffii]
gi|300171875|gb|EFJ38475.1| hypothetical protein SELMODRAFT_437396 [Selaginella moellendorffii]
Length = 523
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 142/444 (31%), Positives = 214/444 (48%), Gaps = 40/444 (9%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD YE T+++++R++A+DP SKI+GYLL+QD +++M+R+A G + LL +++ KAK
Sbjct: 1 MDPYELTRMLYARVQALDPRYVSKIIGYLLLQDEAEQDMLRMALGSDALLFSVVDKAKQE 60
Query: 61 LSNASASASASATNPSSLSPSSAPWLPPASLSYA------------NVVNGSSCSS---- 104
L S S +A +P+ P S P PP S A +V + +S
Sbjct: 61 LG-LSPSPNAHFDHPA---PFSRPEHPPFHFSTAFDHQLQSTYHLRDVYHPPLVNSHVPF 116
Query: 105 ---TNAAASASESLYYSNISNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHN 161
A +I + + + + H + + +FL+ + +
Sbjct: 117 QKQLQQQAELMNRPSMQDIYQHQPLFGAGVFPNDHFYPETFAFLNRNRLKQQKQQQQKSD 176
Query: 162 HHHLLKRSLSLPVHPNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAAT 221
H L+ LSL H + S NS WK C+Y+++G CK+G+ C+F +H+P +
Sbjct: 177 EHDLM---LSLSEHESPNSSSSSSNNSSHAWKPCVYYSRGHCKHGSGCRF--LHTPNSLG 231
Query: 222 AAAIVGSPSKLSEFELSQELLLRSKASVQQRKLAAA---SQFMGSFPYNKCMNFLNDTQR 278
G+ S L EL + LLR++ S L +F + + + Q
Sbjct: 232 IEEH-GTESALERLELEIQELLRARKSPVPISLLPQMYFEEFGSALHVDGFLATPEAVQG 290
Query: 279 SAALMMGDELHNKFGTCSRPERNDFFGSMNPSARQIYLTFPAD-------STFREEDVSN 331
S + + N +P + S+R D S F EEDV+
Sbjct: 291 SGLTSLLCHMKNTL-VIDQPNGQQAVVLVEESSRLAVAAHRGDNYDHNGISAFTEEDVNA 349
Query: 332 YFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKV 391
+FS YGPV DVRIPYQQKRMFGFVTF++ ETVK ILA+GNPH+VC +RVLVKPY++K K
Sbjct: 350 HFSAYGPVQDVRIPYQQKRMFGFVTFIHGETVKTILAEGNPHYVCGARVLVKPYRDKVKY 409
Query: 392 QEKKQQQHQQQMERGEYSSACSSP 415
+KK Q + R A P
Sbjct: 410 TDKKNADQQSRNARNNTDLASKLP 433
>gi|449463743|ref|XP_004149591.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Cucumis sativus]
gi|449518519|ref|XP_004166289.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Cucumis sativus]
Length = 528
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 205/430 (47%), Gaps = 76/430 (17%)
Query: 7 TKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTHLSNA-S 65
T+ VF RI IDP+N KI+G+LL+ DNGD+EM RLA E+ + ++ AKT L S
Sbjct: 7 TRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTELHQLRS 66
Query: 66 ASASASATNPSSLSPSSAP--WLPPASLSYANVVNGSSCSSTNAAASASESLYYSNISNN 123
S + PS++P W TN SL Y + S
Sbjct: 67 MPVPVSPLAIRNRQPSTSPPGW--------------EQQQLTNKHTPDYISLGYHDSS-- 110
Query: 124 NSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNVCFGSD 183
Y + A+ F +DH+ ++S+ SS D + ++ + S S + D
Sbjct: 111 -MYDLQNAANLF-CLEDHM---EQSNSGLSSFDCSYADN---MLNSFSTRNTRHYSNVPD 162
Query: 184 DDPNSGLGWKHCLYFAKGFCKNGTACKF----------HHIHSPEAATAAAIVGSPSKLS 233
P + C Y+ KGFCK+G +C++ H+++ + V P L
Sbjct: 163 FQPRT------CHYYNKGFCKHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLE 216
Query: 234 EFELSQELLLRSKASVQQRKLAAASQFMGSF-PYNKCMN---FLNDTQRS-----AALMM 284
E LL+S+ + ++ AS M + Y K + +L ++QR + +
Sbjct: 217 RLEFEIVELLKSR---RGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKL 273
Query: 285 GDELHNKFGTCSRP--------------------ERNDFFGSMNPSARQIYLTFPADSTF 324
L N RP +RND G + SARQIY+TFPADSTF
Sbjct: 274 LTRLKNSIQVIDRPHGQHAVILAEDAPKFMDHRKDRNDP-GPIVSSARQIYMTFPADSTF 332
Query: 325 REEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKP 384
E+DVS+YF YG V DVRIP QQ+RMFGFVTF ETVKLIL+ + H +C +RVLVKP
Sbjct: 333 TEDDVSDYFRQYGMVEDVRIPCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKP 392
Query: 385 YKEKGKVQEK 394
Y+EK K+ E+
Sbjct: 393 YREKSKLLER 402
>gi|15224480|ref|NP_178588.1| zinc finger CCCH domain-containing protein 18 [Arabidopsis
thaliana]
gi|75337298|sp|Q9SJ41.1|C3H18_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 18;
Short=AtC3H18
gi|4755187|gb|AAD29054.1| hypothetical protein [Arabidopsis thaliana]
gi|330250805|gb|AEC05899.1| zinc finger CCCH domain-containing protein 18 [Arabidopsis
thaliana]
Length = 536
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 149/436 (34%), Positives = 207/436 (47%), Gaps = 87/436 (19%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLI-QDNGDKEMIRLAFGPETLLHNLIFKAKT 59
M+ E+ +V +RI+ ++PENA+KI GYLL+ Q+NG+++MIRLAF P++++ ++I K
Sbjct: 1 MNFTESMNVVHARIQQLEPENAAKIFGYLLLMQENGNRDMIRLAFCPDSVMCSVINCVKY 60
Query: 60 HLSNASASASASATNPSSLSPSSAPWLPPASLSYANVVNGSSCSSTNAAASASESLYYSN 119
L+ S SP S P S+ S S E+ +
Sbjct: 61 ELARNSHHYH---------SPPSDHIPTPKFGSFTGSSPLSVSVSPPMKTGFWENSTEMD 111
Query: 120 ISNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLL--KRSLSLPVHPN 177
NN F F+D L+ S E ++ + L +RS SLP P
Sbjct: 112 TLQNNL--------QFLNFEDPLT----SPEFSNGFFSQERQCLPLRTSRRSPSLPEFP- 158
Query: 178 VCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHS-PEAATAAAI----------- 225
K C YF KGFCK+G C++ H PE + A +
Sbjct: 159 --------------VKICHYFNKGFCKHGNNCRYFHGQIIPERESFAQMFNPNNNLSDEE 204
Query: 226 -VGSPSKLS--EFELSQELLLRSKASVQQRKLAAASQFMGSFPYNKCMN---FLNDTQR- 278
V SP L E E+ + L LR A + A+ M Y + + +L ++QR
Sbjct: 205 HVVSPVSLEKLEGEIIELLKLRRGAPIS----IASLPMMYYEKYGRTLQAEGYLTESQRH 260
Query: 279 ----SAALMMGDELHNKFGTCSRP--------------------ERNDFFGSMNPSARQI 314
+ + L N RP ERN+ G++ +RQI
Sbjct: 261 GKAGYSLTKLLARLKNTIRLVDRPHGQHSVILAEDASKFVEYTGERNEH-GAILAGSRQI 319
Query: 315 YLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHF 374
YLTFPA+S+F E DVS YF+ YG V DVRIP QQKRM+GFVTF ETVK ILAKGNPHF
Sbjct: 320 YLTFPAESSFTEHDVSIYFTSYGHVEDVRIPCQQKRMYGFVTFASSETVKHILAKGNPHF 379
Query: 375 VCDSRVLVKPYKEKGK 390
+C++RVLVKPY+EK +
Sbjct: 380 ICNARVLVKPYREKSR 395
>gi|302822034|ref|XP_002992677.1| hypothetical protein SELMODRAFT_236569 [Selaginella moellendorffii]
gi|300139523|gb|EFJ06262.1| hypothetical protein SELMODRAFT_236569 [Selaginella moellendorffii]
Length = 361
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 127/226 (56%), Gaps = 43/226 (19%)
Query: 195 CLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSK------AS 248
CLY++KG CK GT+C+ SP + + L E+ + LLR + AS
Sbjct: 153 CLYYSKGHCKRGTSCR-----SPSSGS----------LERLEMELQELLRGRRTPVSIAS 197
Query: 249 VQQ-------RKLAAASQFMGSFPYNKC----MNFLNDTQRSAALMMGDELHNKFGTCSR 297
+ Q R L A S + K L + S AL+ D H +
Sbjct: 198 LPQLYFEKFGRALQAQGYLTESQRHGKAGCSLTKLLARLKGSVALI--DRPHGQHAVVLA 255
Query: 298 PERNDFFG---------SMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQ 348
+ F G +NPS+RQIYLTFPA+STF E+DVS +F YGPV DVRIPYQQ
Sbjct: 256 EDAQRFVGYRADRDDLKDVNPSSRQIYLTFPAESTFTEDDVSAHFRSYGPVQDVRIPYQQ 315
Query: 349 KRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEK 394
KRMFGFVTF+YPETVK IL++GNPH++C +RVLVKPY+EK K+ E+
Sbjct: 316 KRMFGFVTFIYPETVKAILSEGNPHYICGARVLVKPYREKAKLGER 361
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 47/61 (77%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MD+YEAT+LVF+R++A DPEN SKI+G +L+QD ++EM RLA G + LL + I KA+
Sbjct: 1 MDAYEATQLVFARVQAQDPENVSKIIGLMLLQDRSEQEMARLALGSDALLQSAIAKARRE 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|218192754|gb|EEC75181.1| hypothetical protein OsI_11409 [Oryza sativa Indica Group]
Length = 221
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 109/147 (74%), Gaps = 23/147 (15%)
Query: 334 SIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQE 393
SIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +
Sbjct: 6 SIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPD 65
Query: 394 KKQQQHQQQMERGEYSSACSSPSG-----PFDFH-FGGRMLY----NNQEMLRRK---LE 440
KK Q G++ S C++P+G PFD H G RML N+ MLRRK +
Sbjct: 66 KKHQ--------GDF-SGCTTPTGLDGRDPFDLHQLGARMLQHSNSTNEMMLRRKLEEQQ 116
Query: 441 EQADLQQAIEMQGRRLMNLQ-LHLKNN 466
+ A+LQQAIE+ RRLM+LQ L LKN
Sbjct: 117 QAAELQQAIELHSRRLMDLQLLDLKNR 143
>gi|297816588|ref|XP_002876177.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322015|gb|EFH52436.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 352
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 139/412 (33%), Positives = 192/412 (46%), Gaps = 103/412 (25%)
Query: 10 VFSRIKAIDPENASKIMGYLLI-QDNGDKEMIRLAFGPETLLHNLIFKAKTHLSNAS--- 65
V +RI+ ++PENA KI+GYLL+ Q + D++MIRLAF P++++ ++I K L+N S
Sbjct: 4 VQNRIQQLEPENALKIIGYLLLMQHHNDRDMIRLAFCPDSVMRSMINCVKYELANNSHCD 63
Query: 66 --ASASASATNPSSLSPSSAPWL-----PPASLSYANVVNGSSCSSTNAAASASESLYYS 118
S S + SS L PP+ LS G+S ++
Sbjct: 64 IPTSDHIQVRKFGSFTGSSNQSLLVSISPPSVLSM-----GTS--------------FWE 104
Query: 119 NISNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLLKRSLSLPVHPNV 178
N ++ +S +++ +F SF + + S + +RSLSLP P
Sbjct: 105 NTNDMDSSLQNNVYPEFST-----SFFSQEKQGLSLRTS---------RRSLSLPEFP-- 148
Query: 179 CFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELS 238
K C YF KGFCK+G C S E +A+ L + E
Sbjct: 149 -------------VKICHYFNKGFCKHGNNC------SDEEHVVSAV-----SLEKLERE 184
Query: 239 QELLLRSKA-------------------SVQQRKLAAASQFMGSFPYN--KCMNFLNDTQ 277
LL+S+ ++Q SQ G Y+ K + L +T
Sbjct: 185 IIYLLKSRRGAPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLVRLKNTI 244
Query: 278 R--------SAALMMGDELHNKFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDV 329
R + ++ D L T + E G++ +RQIYLTFPA+S+F E DV
Sbjct: 245 RLIDRPHGQHSVILAEDVLKFVEYTGEKSEH----GAILAGSRQIYLTFPAESSFTEHDV 300
Query: 330 SNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVL 381
SNYFS GPV DVRIP QQKRMFGF TF Y E VK ILAKGNPHFVC +RVL
Sbjct: 301 SNYFSKVGPVEDVRIPCQQKRMFGFETFAYTEDVKHILAKGNPHFVCGARVL 352
>gi|15231722|ref|NP_190866.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|7529722|emb|CAB86902.1| putative protein [Arabidopsis thaliana]
gi|332645500|gb|AEE79021.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 381
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 143/414 (34%), Positives = 195/414 (47%), Gaps = 95/414 (22%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLI-QDNGDKEMIRLAFGPETLLHNLIFKAK- 58
M+ EA +V +RI ++PENASKI+GYLL+ QD D++MIRLAF P++++ ++I K
Sbjct: 1 MNFTEAMNVVHNRIHQLEPENASKIIGYLLLMQDQNDRDMIRLAFCPDSVMRSMINCVKC 60
Query: 59 -----THLSNASASASASATNPSSLSPSSAPWL-----PPASLSYANVVNGSSCSSTNAA 108
+H +N +S SLS SS L PP+ LS G+S
Sbjct: 61 ELAKNSHYNNIPSSDHIQIRKFGSLSGSSNQSLLVSASPPSVLSM-----GTS------- 108
Query: 109 ASASESLYYSNISNNNSYASSDIADDFHQFQDHLSFLDESSELASSTDADHHNHHHLL-- 166
++ N ++ +S + D F F+D ++ S E ++S + L
Sbjct: 109 -------FWENTNDMDS-SLKDNVQYFLDFEDSVT----SPEFSTSFFSQKKQSLSLRTS 156
Query: 167 KRSLSLPVHPNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIV 226
+RSLSLP P K C YF KGFCK+G C H+ S E V
Sbjct: 157 RRSLSLPEFP---------------LKICHYFNKGFCKHGNNC--HNNLSDEEH-----V 194
Query: 227 GSPSKLSEFELSQELLLRSKA-------------------SVQQRKLAAASQFMG--SFP 265
SP L + E LL+S+ S+Q SQ G F
Sbjct: 195 VSPGSLEKLEREIIELLKSRRGAPISIAFLPMMYHEKYGRSLQAEGYLTESQRHGKAGFS 254
Query: 266 YNKCMNFLNDTQRSAALMMGDELHNKFGTCSRPERNDFF---------GSMNPSARQIYL 316
K + L +T R + D H + + + F G++ +RQ+YL
Sbjct: 255 LTKLLARLKNTIR-----LIDRPHGQHSVILAEDVSKFVEYTGERSEHGAILAGSRQVYL 309
Query: 317 TFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKG 370
TFPA+S+F E DVSNYFS GPV DVRIP QQKRM+GFVTFVY ETVK ILAK
Sbjct: 310 TFPAESSFTEHDVSNYFSEVGPVEDVRIPCQQKRMYGFVTFVYMETVKRILAKA 363
>gi|77552901|gb|ABA95697.1| RNA recognition motif, putative, expressed [Oryza sativa Japonica
Group]
Length = 480
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 124/325 (38%), Positives = 169/325 (52%), Gaps = 40/325 (12%)
Query: 308 NPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLIL 367
N SARQIYLTFP DS F +EDV NYFS+YG V DVRIPYQ+K MFGFVTF Y +TVKLIL
Sbjct: 163 NCSARQIYLTFPPDSIFSKEDVCNYFSMYGMVQDVRIPYQEKCMFGFVTFAYQKTVKLIL 222
Query: 368 AKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSGPFDFH--FGG 425
AKGNPH++CD+RVLVKPYKEK KV K + + + ++ PF+ + G
Sbjct: 223 AKGNPHYICDARVLVKPYKEKDKVPNKFRHVNHCLIPLRIFAHIL-----PFECYIVLGP 277
Query: 426 RMLYNN----QEMLRRKLEEQADLQQAIEMQGRRLMNLQLHLKNNHLNHQ-FHHGLSNGS 480
R+LY + + R K +EQ Q A E+Q LM L L LN Q + H LS S
Sbjct: 278 RILYRDIASHEASFRMKQDEQ---QHATELQRCCLMRLPL------LNLQDWGHHLS--S 326
Query: 481 PIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQITDHLFHRE---------E 531
P+ S L +N+ I ++ + P V+ D+++ + RE
Sbjct: 327 PMGSHVLLGQVDNKYNI-----NENDNPTHLEDVT-FRDNKLKNEFAMREIASTAISTAA 380
Query: 532 NRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKKSAGGHITVFSS--A 589
RT + + K PN L +E+ LP + F+SP K++ T +S +
Sbjct: 381 KRTVISTEEGKREYGPKAATPNDACGFLESGMEYNLPHSPFSSPTKASNVAATAHTSNIS 440
Query: 590 SAEVDEKNTSSVTSTNNNTKLPSTS 614
S+ K SS+ +LP T+
Sbjct: 441 SSSSPHKVASSLFPPTCTLELPPTT 465
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
M +YEATK+VF+R++A++P A I+G LL +DN + +MIRLA GP+ LL ++I K +T
Sbjct: 1 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDNNEMDMIRLACGPDNLLQSIIAKVRTD 60
Query: 61 LSNASASASASATNPSSL 78
L+N + AS PS +
Sbjct: 61 LTNKPSPPMASWGFPSDI 78
>gi|295913262|gb|ADG57888.1| transcription factor [Lycoris longituba]
Length = 180
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/184 (49%), Positives = 118/184 (64%), Gaps = 36/184 (19%)
Query: 175 HPNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSE 234
P C D G GWK CL++ +GFCKNG+AC+F +H P +A++ E
Sbjct: 22 EPRACLSPD-----GFGWKPCLHYQRGFCKNGSACRF--LHGPVDDISASV--------E 66
Query: 235 FELSQELLLRSKASVQQRKLAAASQFMGSFPY-------NKCMNFL---NDTQRSAALMM 284
EL +L+RSK+ ++LAA++ +FPY NKC F+ N++QR+AA+ +
Sbjct: 67 QEL---MLMRSKS----QRLAASA---AAFPYSPTGSSSNKCFKFMLQQNESQRAAAVAL 116
Query: 285 GDELHN-KFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVR 343
E N KF +R ER+DF G +NPS+RQIYLTFPADSTFREEDVSNYFSIYGPV DVR
Sbjct: 117 MLESENQKFMGRARLERSDFAGIVNPSSRQIYLTFPADSTFREEDVSNYFSIYGPVQDVR 176
Query: 344 IPYQ 347
IPYQ
Sbjct: 177 IPYQ 180
>gi|77548504|gb|ABA91301.1| RNA recognition motif, putative [Oryza sativa Japonica Group]
Length = 401
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/91 (78%), Positives = 78/91 (85%)
Query: 308 NPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLIL 367
N SARQIYLTFP DS F +EDV NYFS+YG V DVRIPYQ+KRMFGFVTF Y +TVKLIL
Sbjct: 163 NCSARQIYLTFPPDSIFSKEDVCNYFSMYGMVQDVRIPYQEKRMFGFVTFAYQKTVKLIL 222
Query: 368 AKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQ 398
AKGNPH++CD+RVLVKPYKEK KV KK QQ
Sbjct: 223 AKGNPHYICDARVLVKPYKEKDKVPNKKFQQ 253
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
M +YEATK+VF+R++A++P A I+G LL +D + +MI LA GP+ LL ++I K +T
Sbjct: 1 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDKNEMDMIHLACGPDNLLQSIIAKVRTD 60
Query: 61 LSNASASASASATNPSSL 78
L+N + AS PS +
Sbjct: 61 LTNKPSPPMASWGFPSDI 78
>gi|222615430|gb|EEE51562.1| hypothetical protein OsJ_32780 [Oryza sativa Japonica Group]
Length = 400
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/91 (78%), Positives = 78/91 (85%)
Query: 308 NPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLIL 367
N SARQIYLTFP DS F +EDV NYFS+YG V DVRIPYQ+KRMFGFVTF Y +TVKLIL
Sbjct: 163 NCSARQIYLTFPPDSIFSKEDVCNYFSMYGMVQDVRIPYQEKRMFGFVTFAYQKTVKLIL 222
Query: 368 AKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQ 398
AKGNPH++CD+RVLVKPYKEK KV KK QQ
Sbjct: 223 AKGNPHYICDARVLVKPYKEKDKVPNKKFQQ 253
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
M +YEATK+VF+R++A++P A I+G LL +D + +MI LA GP+ LL ++I K +T
Sbjct: 1 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDKNEMDMIHLACGPDNLLQSIIAKVRTD 60
Query: 61 LSNASASASASATNPSSL 78
L+N + AS PS +
Sbjct: 61 LTNKPSPPMASWGFPSDI 78
>gi|115474605|ref|NP_001060899.1| Os08g0126700 [Oryza sativa Japonica Group]
gi|42407705|dbj|BAD08853.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113622868|dbj|BAF22813.1| Os08g0126700 [Oryza sativa Japonica Group]
gi|125602052|gb|EAZ41377.1| hypothetical protein OsJ_25894 [Oryza sativa Japonica Group]
gi|215767202|dbj|BAG99430.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 604
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 152/307 (49%), Gaps = 57/307 (18%)
Query: 193 KHCLYFAKGFCKNGTACKF-HHIHSPEAATAAAIVG----------SPSKLSEFELSQEL 241
+ C YF+KG CKNG C + HH +A AAI G +P L E+
Sbjct: 215 RPCHYFSKGICKNGQNCHYSHHQVYQDALAGAAINGDVYNHQPGGVTPGSLETLEMEITE 274
Query: 242 LLRSKASVQQRKLAAASQFMGSFPYNKCM---NFLNDTQR--SAALMMGDELH--NKFGT 294
LL S+ Q +A+ G Y K + +L ++QR A + L NK
Sbjct: 275 LLNSRRG-QPVSIASLPTLYGE-KYGKGLQADGYLTESQRHGKAGYSLTRLLSRLNKIRV 332
Query: 295 CSRP-------------ERNDF----------FGSMNPSARQIYLTFPADSTFREEDVSN 331
RP + DF GS+ S+ QIYLTFPA+STF E+DV+N
Sbjct: 333 IERPHGQHSVVLAEDAAKYMDFRGGGGGGGGDTGSVPASSHQIYLTFPAESTFAEDDVAN 392
Query: 332 YFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKV 391
YF YGPV DVRIP Q++RMFGFV+F PETV IL + NPHF+C SRVLVKPY+EK K
Sbjct: 393 YFGQYGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKSKC 452
Query: 392 QEKKQQQHQQQMERGEYSSACSSPSGPFDFHFGGRML---YNNQEMLRRKLEEQADLQQA 448
++ + + M C P F F + Y+ ++R++L E+ ++
Sbjct: 453 VDRTCVDNIKSM-----VPYCP----PRFFEFDQELYTAEYDASRLMRKQLAEKREM--L 501
Query: 449 IEMQGRR 455
+EM+ RR
Sbjct: 502 LEMERRR 508
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
M+ E KL F+R++ ++PE+ KI G +L+++ + E+++LA+GPE L I K
Sbjct: 1 MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAA 60
Query: 61 LSNASASASASATN 74
L+ A SA+A +
Sbjct: 61 LTVIYARCSAAAAH 74
>gi|125560003|gb|EAZ05451.1| hypothetical protein OsI_27665 [Oryza sativa Indica Group]
Length = 607
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 152/307 (49%), Gaps = 57/307 (18%)
Query: 193 KHCLYFAKGFCKNGTACKF-HHIHSPEAATAAAIVG----------SPSKLSEFELSQEL 241
+ C YF+KG CKNG C + HH +A AAI G +P L E+
Sbjct: 218 RPCHYFSKGICKNGQNCHYSHHQVYQDALAGAAINGDVYNHQPGGVTPGSLETLEMEITE 277
Query: 242 LLRSKASVQQRKLAAASQFMGSFPYNKCM---NFLNDTQR--SAALMMGDELH--NKFGT 294
LL S+ Q +A+ G Y K + +L ++QR A + L NK
Sbjct: 278 LLNSRRG-QPVSIASLPTLYGE-KYGKGLQADGYLTESQRHGKAGYSLTRLLSRLNKIRV 335
Query: 295 CSRP-------------ERNDF----------FGSMNPSARQIYLTFPADSTFREEDVSN 331
RP + DF GS+ S+ QIYLTFPA+STF E+DV+N
Sbjct: 336 IERPHGQHSVVLAEDAAKYMDFRGGGGGGGGDTGSVPASSHQIYLTFPAESTFAEDDVAN 395
Query: 332 YFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKV 391
YF YGPV DVRIP Q++RMFGFV+F PETV IL + NPHF+C SRVLVKPY+EK K
Sbjct: 396 YFGQYGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKSKC 455
Query: 392 QEKKQQQHQQQMERGEYSSACSSPSGPFDFHFGGRML---YNNQEMLRRKLEEQADLQQA 448
++ + + M C P F F + Y+ ++R++L E+ ++
Sbjct: 456 VDRTCVDNIKSM-----VPYCP----PRFFEFDQELYTAEYDASRLMRKQLAEKREM--L 504
Query: 449 IEMQGRR 455
+EM+ RR
Sbjct: 505 LEMERRR 511
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
M+ E KL F+R++ ++PE+ KI G +L+++ + E+++LA+GPE L I K
Sbjct: 1 MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAA 60
Query: 61 LSNASASASASATN 74
L+ A SA+A +
Sbjct: 61 LTVIYARCSAAAAH 74
>gi|205688239|sp|Q6ZK57.2|C3H54_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 54;
Short=OsC3H54
Length = 653
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 152/307 (49%), Gaps = 57/307 (18%)
Query: 193 KHCLYFAKGFCKNGTACKF-HHIHSPEAATAAAIVG----------SPSKLSEFELSQEL 241
+ C YF+KG CKNG C + HH +A AAI G +P L E+
Sbjct: 264 RPCHYFSKGICKNGQNCHYSHHQVYQDALAGAAINGDVYNHQPGGVTPGSLETLEMEITE 323
Query: 242 LLRSKASVQQRKLAAASQFMGSFPYNKCM---NFLNDTQR--SAALMMGDELH--NKFGT 294
LL S+ Q +A+ G Y K + +L ++QR A + L NK
Sbjct: 324 LLNSRRG-QPVSIASLPTLYGE-KYGKGLQADGYLTESQRHGKAGYSLTRLLSRLNKIRV 381
Query: 295 CSRP-------------ERNDF----------FGSMNPSARQIYLTFPADSTFREEDVSN 331
RP + DF GS+ S+ QIYLTFPA+STF E+DV+N
Sbjct: 382 IERPHGQHSVVLAEDAAKYMDFRGGGGGGGGDTGSVPASSHQIYLTFPAESTFAEDDVAN 441
Query: 332 YFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKV 391
YF YGPV DVRIP Q++RMFGFV+F PETV IL + NPHF+C SRVLVKPY+EK K
Sbjct: 442 YFGQYGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKSKC 501
Query: 392 QEKKQQQHQQQMERGEYSSACSSPSGPFDFHFGGRML---YNNQEMLRRKLEEQADLQQA 448
++ + + M C P F F + Y+ ++R++L E+ ++
Sbjct: 502 VDRTCVDNIKSM-----VPYCP----PRFFEFDQELYTAEYDASRLMRKQLAEKREM--L 550
Query: 449 IEMQGRR 455
+EM+ RR
Sbjct: 551 LEMERRR 557
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
M+ E KL F+R++ ++PE+ KI G +L+++ + E+++LA+GPE L I K
Sbjct: 50 MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAA 109
Query: 61 LSNASASASASATN 74
L+ A SA+A +
Sbjct: 110 LTVIYARCSAAAAH 123
>gi|218185150|gb|EEC67577.1| hypothetical protein OsI_34930 [Oryza sativa Indica Group]
Length = 581
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 75/87 (86%)
Query: 308 NPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLIL 367
N SARQIYLTFP DS F +EDV NYFS+YG V DVRIPYQ+KRMFGFVTF Y +TVKLIL
Sbjct: 314 NCSARQIYLTFPPDSIFSKEDVCNYFSMYGMVQDVRIPYQEKRMFGFVTFTYQKTVKLIL 373
Query: 368 AKGNPHFVCDSRVLVKPYKEKGKVQEK 394
AKGNPH++CD+RVLVKPYKEK KV K
Sbjct: 374 AKGNPHYICDARVLVKPYKEKDKVPNK 400
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 53/78 (67%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
M +YEATK+VF+R++A++P A I+G LL +DN + +MI LA GP+ LL ++I K +T
Sbjct: 152 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDNNEMDMIHLACGPDNLLQSIIAKVRTD 211
Query: 61 LSNASASASASATNPSSL 78
L+N + AS PS +
Sbjct: 212 LTNKPSPPMASWGFPSDI 229
>gi|218186344|gb|EEC68771.1| hypothetical protein OsI_37303 [Oryza sativa Indica Group]
Length = 430
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 74/87 (85%)
Query: 308 NPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLIL 367
N SARQIYLTFP DS F +EDV NYFS+YG V DVRIPYQ+K MFGFVTF Y +TVKLIL
Sbjct: 163 NCSARQIYLTFPPDSIFSKEDVCNYFSMYGMVQDVRIPYQEKCMFGFVTFAYQKTVKLIL 222
Query: 368 AKGNPHFVCDSRVLVKPYKEKGKVQEK 394
AKGNPH++CD+RVLVKPYKEK KV K
Sbjct: 223 AKGNPHYICDARVLVKPYKEKDKVPNK 249
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
M +YEATK+VF+R++A++P A I+G LL +DN + +MIRLA GP+ LL ++I K +T
Sbjct: 1 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDNNEMDMIRLACGPDNLLQSIIAKVRTD 60
Query: 61 LSNASASASASATNPSSL 78
L+N + AS PS +
Sbjct: 61 LTNKPSPPMASWGFPSDI 78
>gi|222616541|gb|EEE52673.1| hypothetical protein OsJ_35055 [Oryza sativa Japonica Group]
Length = 430
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 74/87 (85%)
Query: 308 NPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLIL 367
N SARQIYLTFP DS F +EDV NYFS+YG V DVRIPYQ+K MFGFVTF Y +TVKLIL
Sbjct: 163 NCSARQIYLTFPPDSIFSKEDVCNYFSMYGMVQDVRIPYQEKCMFGFVTFAYQKTVKLIL 222
Query: 368 AKGNPHFVCDSRVLVKPYKEKGKVQEK 394
AKGNPH++CD+RVLVKPYKEK KV K
Sbjct: 223 AKGNPHYICDARVLVKPYKEKDKVPNK 249
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
M +YEATK+VF+R++A++P A I+G LL +DN + +MIRLA GP+ LL ++I K +T
Sbjct: 1 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDNNEMDMIRLACGPDNLLQSIIAKVRTD 60
Query: 61 LSNASASASASATNPSSL 78
L+N + AS PS +
Sbjct: 61 LTNKPSPPMASWGFPSDI 78
>gi|357115916|ref|XP_003559731.1| PREDICTED: zinc finger CCCH domain-containing protein 54-like
[Brachypodium distachyon]
Length = 552
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 144/310 (46%), Gaps = 48/310 (15%)
Query: 191 GWKHCLYFAKGFCKNGTACKF------------HHIHSPEAATAAAIVGSPSKLSEFELS 238
G + C YF KG CKNG C + HH+ T +P L E+
Sbjct: 171 GRRPCHYFFKGICKNGQNCHYSHHQVYADMDHQHHLQGNGGGT------TPGSLERLEVE 224
Query: 239 QELLLRSKASVQQRKLAAASQFMGSFPYNKCM---NFLNDTQR--SAALMMGDELH--NK 291
LL S+ Q +A+ G Y K + +L ++QR A + L NK
Sbjct: 225 ITELLHSRRG-QPVSIASLPTLYGEM-YGKGLQADGYLTESQRHGKAGYSLTKLLSRLNK 282
Query: 292 FGTCSRPE-----------------RNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFS 334
RP R+D G M S+ QIYLTFP+DS+F E+DV+NYF
Sbjct: 283 IRVIERPHGQHSVVLAEDAAKYTDCRSDRGGDMPASSNQIYLTFPSDSSFTEDDVANYFG 342
Query: 335 IYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEK 394
YGPV DVRIP Q +RMFGFV+F PETV +L + NPHF+C SRVL KPY+EK K +
Sbjct: 343 QYGPVRDVRIPCQDQRMFGFVSFQNPETVTTLLTRRNPHFICGSRVLAKPYREKTKCINE 402
Query: 395 KQQQHQQQMERGEYSSACSSPSGPFDFHFGGRML---YNNQEMLRRKLEEQADLQQAIEM 451
+ R S F L Y++ + R++L E+ D + +E+
Sbjct: 403 RSSIEVVYKVRPSLSLPQKEEKKLHPHQFWLTDLPAEYDSPRLARKQLVEKRD-NRLLEL 461
Query: 452 QGRRLMNLQL 461
+ R L L++
Sbjct: 462 ERRHLAGLRV 471
>gi|413957281|gb|AFW89930.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 433
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 111/201 (55%), Gaps = 24/201 (11%)
Query: 195 CLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQRKL 254
C YF KG CKNG +C + H H EA + L + EL LL+S+ Q +
Sbjct: 130 CHYFIKGICKNGQSCHYSH-HRQEAQVCSG------ALEKLELEIIELLKSRHG-QPLSI 181
Query: 255 AAASQFMGSFPYNKCMNFL-NDTQRSAALMMGDELHNKFGTCSRPERNDFFGSMNPSARQ 313
A+ G P+ + L D R LM SR ER G M S+ Q
Sbjct: 182 ASLPTLYGDRPHGQHYVVLAEDAGRYKELM------------SRGERG---GDMGSSSHQ 226
Query: 314 IYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPH 373
+YLTFP++STF EEDV+NYF +YG V DVRIP+Q+KRMFGFV+F PETV IL PH
Sbjct: 227 VYLTFPSESTFMEEDVANYFGLYGSVRDVRIPWQEKRMFGFVSFHNPETVNTILTMRIPH 286
Query: 374 FVCDSRVLVKPYKEKGKVQEK 394
F+ +SRVLVK Y EK K E+
Sbjct: 287 FIGESRVLVKRYIEKSKCIER 307
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MDS E L R+K ++PENASKI+G +L+++ +++M++LA+G + +H I AK
Sbjct: 1 MDSSELHILALQRVKQVEPENASKILGCILLEEPDNQDMLQLAYGNDAEVHAKISHAKAM 60
Query: 61 LSNASASASAS 71
L A S+S
Sbjct: 61 LDAIVACCSSS 71
>gi|413957279|gb|AFW89928.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 381
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 117/226 (51%), Gaps = 35/226 (15%)
Query: 195 CLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQRKL 254
C YF KG CKNG +C + H H EA + L + EL LL+S+ Q +
Sbjct: 130 CHYFIKGICKNGQSCHYSH-HRQEAQVCSG------ALEKLELEIIELLKSRHG-QPLSI 181
Query: 255 AAASQFMGSFPYNKCM---NFLNDTQRSA----ALMMGDELHNKFGTCSRPE-------- 299
A+ G Y K + +L +++R +L +K T RP
Sbjct: 182 ASLPTLYGD-RYGKSLKADGYLTESKRHGKAGYSLSRLISRLSKITTIERPHGQHYVVLA 240
Query: 300 -----------RNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQ 348
R + G M S+ Q+YLTFP++STF EEDV+NYF +YG V DVRIP+Q+
Sbjct: 241 EDAGRYKELMSRGERGGDMGSSSHQVYLTFPSESTFMEEDVANYFGLYGSVRDVRIPWQE 300
Query: 349 KRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEK 394
KRMFGFV+F PETV IL PHF+ +SRVLVK Y EK K E+
Sbjct: 301 KRMFGFVSFHNPETVNTILTMRIPHFIGESRVLVKRYIEKSKCIER 346
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MDS E L R+K ++PENASKI+G +L+++ +++M++LA+G + +H I AK
Sbjct: 1 MDSSELHILALQRVKQVEPENASKILGCILLEEPDNQDMLQLAYGNDAEVHAKISHAKAM 60
Query: 61 LSNASASASAS 71
L A S+S
Sbjct: 61 LDAIVACCSSS 71
>gi|226500396|ref|NP_001140295.1| uncharacterized protein LOC100272340 [Zea mays]
gi|194698886|gb|ACF83527.1| unknown [Zea mays]
gi|413957280|gb|AFW89929.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 472
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 117/226 (51%), Gaps = 35/226 (15%)
Query: 195 CLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQRKL 254
C YF KG CKNG +C + H H EA + L + EL LL+S+ Q +
Sbjct: 130 CHYFIKGICKNGQSCHYSH-HRQEAQVCSG------ALEKLELEIIELLKSRHG-QPLSI 181
Query: 255 AAASQFMGSFPYNKCM---NFLNDTQRSA----ALMMGDELHNKFGTCSRPE-------- 299
A+ G Y K + +L +++R +L +K T RP
Sbjct: 182 ASLPTLYGDR-YGKSLKADGYLTESKRHGKAGYSLSRLISRLSKITTIERPHGQHYVVLA 240
Query: 300 -----------RNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQ 348
R + G M S+ Q+YLTFP++STF EEDV+NYF +YG V DVRIP+Q+
Sbjct: 241 EDAGRYKELMSRGERGGDMGSSSHQVYLTFPSESTFMEEDVANYFGLYGSVRDVRIPWQE 300
Query: 349 KRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEK 394
KRMFGFV+F PETV IL PHF+ +SRVLVK Y EK K E+
Sbjct: 301 KRMFGFVSFHNPETVNTILTMRIPHFIGESRVLVKRYIEKSKCIER 346
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MDS E L R+K ++PENASKI+G +L+++ +++M++LA+G + +H I AK
Sbjct: 1 MDSSELHILALQRVKQVEPENASKILGCILLEEPDNQDMLQLAYGNDAEVHAKISHAKAM 60
Query: 61 LSNASASASAS 71
L A S+S
Sbjct: 61 LDAIVACCSSS 71
>gi|414873767|tpg|DAA52324.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 485
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 93/151 (61%), Gaps = 25/151 (16%)
Query: 276 TQRSAALMM--GDELHNKFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYF 333
T R+A M+ G+++H R +R D S P+ARQI VSNYF
Sbjct: 337 TLRAAVGMLLGGEDMHRFPVRSPRMDRGDLICS--PAARQI--------------VSNYF 380
Query: 334 SIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQ- 392
S++GPV DVRIPYQQK MFGFVTFVY ETVK+I +KGNPHFVC +RVLVKPYKEKGK+
Sbjct: 381 SMFGPVQDVRIPYQQKHMFGFVTFVYAETVKVIPSKGNPHFVCYARVLVKPYKEKGKIPG 440
Query: 393 --EKKQQQHQQQMERGEYSSACSSPSGPFDF 421
K Q H E G+ C+SP+ DF
Sbjct: 441 RFRKLQHAHHGGAEFGD----CASPTRLLDF 467
>gi|302810669|ref|XP_002987025.1| hypothetical protein SELMODRAFT_45395 [Selaginella moellendorffii]
gi|300145190|gb|EFJ11868.1| hypothetical protein SELMODRAFT_45395 [Selaginella moellendorffii]
Length = 197
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 114/204 (55%), Gaps = 34/204 (16%)
Query: 193 KHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKAS---- 248
K C+Y+++GFCK+G++C+F H H T SPS L + + LL S+ S
Sbjct: 1 KPCVYYSRGFCKHGSSCRFSHDH----ITGDGSSPSPSSLERLDRELQELLSSRTSPVSI 56
Query: 249 --------------VQQRKLAAASQFMGSFPYN---------KCMNFLNDTQRSAALMMG 285
+Q SQ G YN + ++ A+++
Sbjct: 57 AALPQLYYERFGRPLQAEGYLTESQRHGKSGYNLTRLLSKLKGSITVIDRPHGQHAVVLA 116
Query: 286 DELHNKFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIP 345
++ H KF T + E D G +NPS+RQIYLTFPA+S+F E+DVS +F YGPV DVRIP
Sbjct: 117 EDAH-KFATFA-GEHYDLSG-VNPSSRQIYLTFPAESSFSEDDVSIHFRAYGPVQDVRIP 173
Query: 346 YQQKRMFGFVTFVYPETVKLILAK 369
+QQKRMFGFVTFVYPETVK++L++
Sbjct: 174 FQQKRMFGFVTFVYPETVKIVLSE 197
>gi|302807700|ref|XP_002985544.1| hypothetical protein SELMODRAFT_45393 [Selaginella moellendorffii]
gi|300146750|gb|EFJ13418.1| hypothetical protein SELMODRAFT_45393 [Selaginella moellendorffii]
Length = 197
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 110/200 (55%), Gaps = 26/200 (13%)
Query: 193 KHCLYFAKGFCKNGTACKFHHIHSP--------------EAATAAAIVGSPSKLSEFELS 238
K C+Y+++GFCK+G++C+F H H + + S +S L
Sbjct: 1 KPCVYYSRGFCKHGSSCRFSHDHIAGDGSSPSPSSLERLDRELQELLSSRTSPVSIAALP 60
Query: 239 QELLLRSKASVQQRKLAAASQFMGSFPYN---------KCMNFLNDTQRSAALMMGDELH 289
Q R +Q SQ G YN + ++ A+++ ++ H
Sbjct: 61 QLYYERFGRPLQAEGYLTESQRHGKSGYNLTRLLSKLKGSITVIDRPHGQHAVVLAEDAH 120
Query: 290 NKFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQK 349
KF T + E D G +NPS+RQIYLTFPA+S+F E+DVS +F YGPV DVRIP+QQK
Sbjct: 121 -KFATFA-GEHYDLSG-VNPSSRQIYLTFPAESSFSEDDVSTHFRAYGPVQDVRIPFQQK 177
Query: 350 RMFGFVTFVYPETVKLILAK 369
RMFGFVTFVYPETVK++L++
Sbjct: 178 RMFGFVTFVYPETVKIVLSE 197
>gi|212275268|ref|NP_001130674.1| uncharacterized protein LOC100191777 [Zea mays]
gi|194689800|gb|ACF78984.1| unknown [Zea mays]
Length = 259
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 149/313 (47%), Gaps = 78/313 (24%)
Query: 351 MFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGE--Y 408
MFGFVTFVYPETVKLILAKGNPHF+CD+RVLVKPYKEKGKV +K ++Q Q Q ER +
Sbjct: 1 MFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQ-QLQGERAVDFF 59
Query: 409 SSACSSPSGPFDFH-FGGRMLYN----NQEMLRRK-----LEEQADLQQAIEMQGRRLMN 458
S+ D H G RML + N+ +LRRK A+LQQA+E+Q RRLM
Sbjct: 60 SNGLDGRENHLDLHQLGARMLQHSHSANEMLLRRKLEEQQQAAAAELQQAMELQSRRLMR 119
Query: 459 LQ-LHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPV 517
LQ L LK SP P ++ P R + PP+
Sbjct: 120 LQLLDLK------------PRASPSPIGSMPLGPTQRA---------VDSPPDSG----- 153
Query: 518 TDSQITDHLFHREENRTSNHNKNNNSDGNDKEEKPNSDENDLCDSLEHILPDNLFASPKK 577
REE+ + + N +SD S EH LPD+ FASP +
Sbjct: 154 -----------REESSAGDASPNADSD----------------QSAEHNLPDSPFASPTR 186
Query: 578 SAGGHITVFSSASAEV-----DEKNTSSVTSTNNNTKLPSTSLNMSSLNS----CLLQMS 628
SA F++ E+ S ++++ + + L S+L+ + M+
Sbjct: 187 SAALARDPFAAIDREMAASPGRRNGAGSFAGISSSSGVLAGHLRPSALDIPSPFFPMSMT 246
Query: 629 RFSS--GQGTIGM 639
R SS G G IGM
Sbjct: 247 RLSSDHGAGAIGM 259
>gi|75328302|sp|Q84ZT0.1|C3H51_ORYSJ RecName: Full=Putative zinc finger CCCH domain-containing protein
51; Short=OsC3H51
gi|27817837|dbj|BAC55605.1| RRM-containing protein-like [Oryza sativa Japonica Group]
Length = 513
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 119/228 (52%), Gaps = 37/228 (16%)
Query: 196 LYFAKGFCKNGTACKFHHIHSPEAATAAAI--VGSPSKLSEFELSQELLLRSKASVQQRK 253
+F +G+CK G C+F H PE + S SKL + E+ +ELL+ V +
Sbjct: 184 FHFFRGYCKKGVNCQFFHGSVPELHNPRQVHPFASLSKL-DMEI-RELLIGIPPPVAVDR 241
Query: 254 LAAASQFMGSFPYNKCM---NFLNDTQRSA-------ALMMG-------DELHNKFGTC- 295
L + M Y K + +L ++Q+ +L+MG + H ++
Sbjct: 242 LPS----MYFEKYGKPLRPDGWLTESQQHGRTGCSLTSLLMGLNTIRVVEREHGQYHVVL 297
Query: 296 ---SRPERNDFFG--------SMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRI 344
+R + D G + QIY+TFP S F ++DV NYF +GPV VRI
Sbjct: 298 VEDARKKYMDCLGLAHSCNLMDTGTGSNQIYMTFPVHSKFTDDDVENYFKQFGPVSGVRI 357
Query: 345 PYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQ 392
PYQ+KRMFGFV+F+Y ETV+LIL+KG HF+C RVLVK Y EK +++
Sbjct: 358 PYQEKRMFGFVSFLYTETVRLILSKGTAHFICGLRVLVKRYMEKSELR 405
>gi|302774330|ref|XP_002970582.1| hypothetical protein SELMODRAFT_65615 [Selaginella moellendorffii]
gi|300162098|gb|EFJ28712.1| hypothetical protein SELMODRAFT_65615 [Selaginella moellendorffii]
Length = 205
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 106/207 (51%), Gaps = 36/207 (17%)
Query: 193 KHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSK-----LSEFELSQELLLRSKA 247
K C+YFAKGFCKNG++C+F H +A SP K + E + LLRS+
Sbjct: 5 KPCMYFAKGFCKNGSSCRFIH------DSALLQSDSPPKDQFLSMERLEFQLQELLRSRK 58
Query: 248 SVQQRKLAAASQFMGSF-PYNKCMNFLNDTQRSAA-----LMMGDELHNKFGTCSRPERN 301
V + + + + + +++++QR A + L++ F + RP R
Sbjct: 59 GVPISVSSLPQIYFEKYGRWLEADGYVSESQRHAKPGYTLTKLLSNLYHFFLSFPRPHRQ 118
Query: 302 -------------------DFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDV 342
D +P +RQIYLTFP DS F EEDV+ +F YGPV DV
Sbjct: 119 HALMLAEDVPKYSAHKVDLDECNDPSPCSRQIYLTFPCDSNFSEEDVATHFRAYGPVEDV 178
Query: 343 RIPYQQKRMFGFVTFVYPETVKLILAK 369
RIP Q KRMFGFVTF Y ETV++ILA+
Sbjct: 179 RIPTQHKRMFGFVTFTYAETVRMILAE 205
>gi|302770004|ref|XP_002968421.1| hypothetical protein SELMODRAFT_65612 [Selaginella moellendorffii]
gi|300164065|gb|EFJ30675.1| hypothetical protein SELMODRAFT_65612 [Selaginella moellendorffii]
Length = 204
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 107/206 (51%), Gaps = 35/206 (16%)
Query: 193 KHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSK-----LSEFELSQELLLRSKA 247
K C+YFAKGFCKNG++C+F H +A SP K + E + LLRS+
Sbjct: 5 KPCMYFAKGFCKNGSSCRFIH------DSALLQSDSPPKDQFLSMERLEFQLQELLRSRK 58
Query: 248 SVQQRKLAAASQFMGSF-PYNKCMNFLNDTQRSAALMMG-DELHNKFGTCS---RPERN- 301
V + + + + + +++++QR A +L +KF + + RP R
Sbjct: 59 GVPISVSSLPQIYFEKYGRWLEADGYVSESQRHAKPSYTLTKLLSKFQSVTVVERPHRQH 118
Query: 302 ------------------DFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVR 343
D +P +RQIYLTFP DS F EEDV+ +F YGPV DVR
Sbjct: 119 ALMLAEDVPKYSAHKVDLDECNDPSPCSRQIYLTFPCDSNFSEEDVATHFRAYGPVEDVR 178
Query: 344 IPYQQKRMFGFVTFVYPETVKLILAK 369
IP Q KRMFGFVTF Y ETV++ILA+
Sbjct: 179 IPTQHKRMFGFVTFTYAETVRMILAE 204
>gi|125558949|gb|EAZ04485.1| hypothetical protein OsI_26636 [Oryza sativa Indica Group]
Length = 432
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 124/245 (50%), Gaps = 46/245 (18%)
Query: 196 LYFAKGFCKNGTACKFHHIHSPEAATAAAI--VGSPSKLSEFELSQELLLRSKASVQQRK 253
+F +G+CK G C+F H PE + S SKL + E+ +ELL+ V +
Sbjct: 140 FHFFRGYCKKGVNCQFFHGSVPELHNPRQVHPFASLSKL-DMEI-RELLIGIPPPVAVDR 197
Query: 254 LAAASQFMGSFPYNKCMN---FLNDTQRSA-------ALMMG-------DELHNKFGTC- 295
L + M Y K + +L ++Q+ +L+MG + H ++
Sbjct: 198 LPS----MYFEKYGKPLGPDGWLTESQQHGRTGCSLTSLLMGLNTIRVVEREHGQYHVVL 253
Query: 296 ---SRPERNDFFG--------SMNPSARQIYLTFPADSTFREEDVSNYFSI--------- 335
+R + D G + QIY+TFP S F ++DV NYF
Sbjct: 254 VEDARKKYMDCLGLAHSCNLMDTGTGSNQIYMTFPVHSKFTDDDVENYFKYCLNFIVTRQ 313
Query: 336 YGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKK 395
+GPV VRIPYQ+KRMFGFV+F+Y ETV+LIL+KG HF+C SRVLVK Y EK ++++
Sbjct: 314 FGPVSGVRIPYQEKRMFGFVSFLYTETVRLILSKGTAHFICGSRVLVKRYMEKPELRKIY 373
Query: 396 QQQHQ 400
++ Q
Sbjct: 374 RKNKQ 378
>gi|125600867|gb|EAZ40443.1| hypothetical protein OsJ_24897 [Oryza sativa Japonica Group]
Length = 432
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 123/245 (50%), Gaps = 46/245 (18%)
Query: 196 LYFAKGFCKNGTACKFHHIHSPEAATAAAI--VGSPSKLSEFELSQELLLRSKASVQQRK 253
+F +G+CK G C+F H PE + S SKL + E+ +ELL+ V +
Sbjct: 140 FHFFRGYCKKGVNCQFFHGSVPELHNPRQVHPFASLSKL-DMEI-RELLIGIPPPVAVDR 197
Query: 254 LAAASQFMGSFPYNKCM---NFLNDTQRSA-------ALMMG-------DELHNKFGTC- 295
L + M Y K + +L ++Q+ +L+MG + H ++
Sbjct: 198 LPS----MYFEKYGKPLRPDGWLTESQQHGRTGCSLTSLLMGLNTIRVVEREHGQYHVVL 253
Query: 296 ---SRPERNDFFG--------SMNPSARQIYLTFPADSTFREEDVSNYFSI--------- 335
+R + D G + QIY+TFP S F ++DV NYF
Sbjct: 254 VEDARKKYMDCLGLAHSCNLMDTGTGSNQIYMTFPVHSKFTDDDVENYFKYCLNFIVTRQ 313
Query: 336 YGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKK 395
+GPV VRIPYQ+KRMFGFV+F+Y ETV+LIL+KG HF+C RVLVK Y EK ++++
Sbjct: 314 FGPVSGVRIPYQEKRMFGFVSFLYTETVRLILSKGTAHFICGLRVLVKRYMEKSELRKIY 373
Query: 396 QQQHQ 400
++ Q
Sbjct: 374 RKNKQ 378
>gi|413922880|gb|AFW62812.1| putative cytochrome P450 superfamily protein [Zea mays]
Length = 944
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 64/83 (77%), Gaps = 3/83 (3%)
Query: 339 VHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEK-KQQ 397
+ DVRIPYQQKRMFGFVTFVY ETVK+IL+KGNPHFVCD+RVLVKPYKEKGKV + ++
Sbjct: 636 LQDVRIPYQQKRMFGFVTFVYAETVKVILSKGNPHFVCDARVLVKPYKEKGKVPGRFRKL 695
Query: 398 QHQQQMERGEYSSACSSPSGPFD 420
QH G C+SP+G D
Sbjct: 696 QHTHH--GGAEFVGCASPTGLLD 716
>gi|297835822|ref|XP_002885793.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297331633|gb|EFH62052.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 113/237 (47%), Gaps = 52/237 (21%)
Query: 193 KHCLYFAKGFCKNGTACKFHHIHS-PEAATAAAIVGSPSKLSEFE----------LSQEL 241
K C YF KGFCK+G C++ H PE + A + + LSE E L E+
Sbjct: 160 KICHYFNKGFCKHGNNCRYFHGQIIPERESFALMFNPNNNLSEEEHVVSPVSLEKLEGEI 219
Query: 242 LLRSKASVQQRKLAAASQFMGSFPYNKCMN---FLNDTQR-----SAALMMGDELHNKFG 293
+ KA A+ M S Y + + +L ++QR + + L N
Sbjct: 220 IELLKARRGAPISIASLPMMYSETYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKNTIR 279
Query: 294 TCSRP--------------------ERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYF 333
RP ERN+ G++ +RQIYLTFPA+S+F E DVS
Sbjct: 280 LIDRPHGQHSVILAEDASKFVEYTGERNEH-GAILAGSRQIYLTFPAESSFTEHDVSTTL 338
Query: 334 SIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGK 390
P D+ MFGFVTF ETVKLILAKGNPHF+C +RVLVKPY+EK +
Sbjct: 339 ----PHSDI--------MFGFVTFACTETVKLILAKGNPHFICGARVLVKPYREKSR 383
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLI-QDNGDKEMIRLAFGPETLLHNLIFKAKT 59
M+ E+ +V +RI+ ++PENASKI+GYLL+ QDNG+++MIRLAF P++++ ++I K
Sbjct: 1 MNFTESMNVVHNRIQQLEPENASKIIGYLLLMQDNGNRDMIRLAFCPDSVMRSVINCVKY 60
Query: 60 HLS 62
L+
Sbjct: 61 ELA 63
>gi|449532871|ref|XP_004173401.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like,
partial [Cucumis sativus]
Length = 156
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 56/62 (90%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGPETLLHNLIFKAKTH 60
MDSYEA+++VFSRI+ +DPENASKIMG LLIQD+G+KEMIRLAFGPE LLH++I KAK
Sbjct: 1 MDSYEASRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALLHSVILKAKKD 60
Query: 61 LS 62
LS
Sbjct: 61 LS 62
>gi|357116531|ref|XP_003560034.1| PREDICTED: putative zinc finger CCCH domain-containing protein
51-like [Brachypodium distachyon]
Length = 522
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 196 LYFAKGFCKNGTACKFHHIHSP----EAATAAAIVGSP-SKLSEFELSQELLLRSKASVQ 250
Y + G CK G +C+F H P E A ++ P +++++ + L K +Q
Sbjct: 132 FYMSTGVCKKGWSCRFSHGFGPLGMLEMAIRELLMNRPLTRVADLPV---YLACYKQPLQ 188
Query: 251 QRKLAAASQFMGSFPYNKCMNFLNDTQRSAALMMGDELHNKFGTCSRPERNDFFGSMNPS 310
+ + + + D +++ + + G D N
Sbjct: 189 GWWNQSTGSIISLLARLHTVTLIVDRMGQNFIVLLEHAPSYLGPAVNLNVMDTGSGFN-- 246
Query: 311 ARQIYLTFPADSTFR--EEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILA 368
+IY+TF A+ R E VSNYFS YGPV VR+P R+ GFVTF YP+TV+L+L
Sbjct: 247 --KIYITFTAEGRARCTESLVSNYFSQYGPVLKVRMP--TPRLCGFVTFQYPQTVELLLF 302
Query: 369 KGN---PHFVCDSRVLVKPYKEKGKVQ 392
+ N PHF+C + VLVKPYK G+ +
Sbjct: 303 EWNPQVPHFICGATVLVKPYKHSGETK 329
>gi|242050694|ref|XP_002463091.1| hypothetical protein SORBIDRAFT_02g037630 [Sorghum bicolor]
gi|241926468|gb|EER99612.1| hypothetical protein SORBIDRAFT_02g037630 [Sorghum bicolor]
Length = 211
Score = 89.4 bits (220), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/88 (50%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Query: 307 MNPSA---RQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETV 363
M+P++ QI++ F S F EEDV +YFS YG V +VRIP Q KRM+GFV+F P T
Sbjct: 66 MSPASSNSNQIFVVFMPGSKFTEEDVHSYFSQYGTVSNVRIPPQGKRMYGFVSFQDPGTA 125
Query: 364 KLILAKGNPHFVCDSRVLVKPYKEKGKV 391
+ IL++ PHF+C RV VK YK+K ++
Sbjct: 126 ERILSERTPHFICGDRVCVKAYKDKDEL 153
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 7/56 (12%)
Query: 336 YGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAK---GNPHFVCDSRVLVKPYKEK 388
YGPV+DVR +KRMFG+V+F +PETVK IL++ HF+C V V+PY+EK
Sbjct: 156 YGPVNDVR----KKRMFGYVSFKHPETVKRILSERCLRTSHFICGDHVFVEPYREK 207
>gi|297847526|ref|XP_002891644.1| hypothetical protein ARALYDRAFT_314515 [Arabidopsis lyrata subsp.
lyrata]
gi|297337486|gb|EFH67903.1| hypothetical protein ARALYDRAFT_314515 [Arabidopsis lyrata subsp.
lyrata]
Length = 388
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 77/142 (54%), Gaps = 23/142 (16%)
Query: 336 YGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKK 395
+GPV DVRIP Q++RMFGFVTF ETV +LA+GN H + +S
Sbjct: 196 FGPVVDVRIPNQERRMFGFVTFANAETVTTVLAQGNSHLIGES----------------A 239
Query: 396 QQQHQQQMERGEY----SSACSSPSGPFDFHFGGRMLYNNQEMLRRKLEEQADLQQAIEM 451
QQQ Q +ER + P + FG M N + +R++ QADLQQAIE+
Sbjct: 240 QQQLNQLLERENLLHHPRLSGMDPRDQDESRFGPMMFRNPTQEMRQRRNVQADLQQAIEV 299
Query: 452 --QGRRLMNLQL-HLKNNHLNH 470
Q RRL+NL+L ++N ++H
Sbjct: 300 EDQRRRLLNLKLPDMENKSIHH 321
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFG 45
MD T + RI ++PENA KI+GY L+QD D ++I+LAFG
Sbjct: 1 MDPGGPTATIIERIITLEPENAFKIIGYFLLQDIEDCDLIQLAFG 45
>gi|334183229|ref|NP_001185197.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332194558|gb|AEE32679.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 403
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 86/177 (48%), Gaps = 25/177 (14%)
Query: 304 FGSMNPSARQIYLTFPAD-------STFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVT 356
FGS + R I F D +F ++ VS YF +GPV VRIP Q+++++GFV+
Sbjct: 159 FGSPSEQQRMIAPQFMGDFGSRMSNISFTDQHVSTYFGNFGPVLSVRIPNQKEQVYGFVS 218
Query: 357 FVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPS 416
F ETV IL + NPH + +S V V V + E S + P
Sbjct: 219 FANAETVTTILDQENPHLIGESPVNVTAAATTAGVGWR------------EPFSVGNGPK 266
Query: 417 GPFDFHFGGRMLYNNQEMLRRKLEEQADLQQAIEM--QGRRLMNLQL-HLKNNHLNH 470
G R EML+R EQAD QQAIE+ Q RRL NLQL ++N ++H
Sbjct: 267 GAMSRP--RRFRNETHEMLQRNT-EQADPQQAIEVEDQIRRLSNLQLPGMENKSIHH 320
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGP 46
M +A + RI ++PE+A KI+GY+L QD G E+IRLAF P
Sbjct: 1 MQPGDAIATIIKRILTLEPEHALKIIGYILFQDFGHTELIRLAFCP 46
>gi|297725823|ref|NP_001175275.1| Os07g0583500 [Oryza sativa Japonica Group]
gi|255677923|dbj|BAH94003.1| Os07g0583500 [Oryza sativa Japonica Group]
Length = 998
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Query: 287 ELHNKFGTCSRPERNDFFGSMNPSARQIYLTFPADS-TFREEDVSNYFSIYGPVHDVRI- 344
E+HN+ + R DFFG S IY+T D +E++ +YF +GPV +V +
Sbjct: 197 EMHNQRQSHPRGRHRDFFGE--GSDFTIYITINFDGGRLTKENIWDYFKKFGPVINVYLS 254
Query: 345 --PYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQ 402
P +K FGFVTF +TV L+L+K PHF+ +V VK Y E K +++K Q
Sbjct: 255 CKPGNEKYTFGFVTFENADTVSLLLSKSTPHFIFGVKVRVKRYLEWTKQEQRKLPQENDH 314
Query: 403 MERGEYSSACS 413
+ + ++C+
Sbjct: 315 FDNVAHRTSCA 325
>gi|27817839|dbj|BAC55607.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 552
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Query: 287 ELHNKFGTCSRPERNDFFGSMNPSARQIYLTFPADS-TFREEDVSNYFSIYGPVHDVRI- 344
E+HN+ + R DFFG S IY+T D +E++ +YF +GPV +V +
Sbjct: 183 EMHNQRQSHPRGRHRDFFGEG--SDFTIYITINFDGGRLTKENIWDYFKKFGPVINVYLS 240
Query: 345 --PYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQ 402
P +K FGFVTF +TV L+L+K PHF+ +V VK Y E K +++K Q
Sbjct: 241 CKPGNEKYTFGFVTFENADTVSLLLSKSTPHFIFGVKVRVKRYLEWTKQEQRKLPQENDH 300
Query: 403 MERGEYSSACS 413
+ + ++C+
Sbjct: 301 FDNVAHRTSCA 311
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 25/150 (16%)
Query: 250 QQRKLAAASQFMGSFPY-NKCMNFLNDTQRSA--ALMMGD---ELHNKFGTCSRPERNDF 303
+QRKL + + + C N + R A ++G ELHN+ + R + DF
Sbjct: 290 EQRKLPQENDHFDNVAHRTSCANAFDGMPRDYLNAQVLGSGVPELHNQRLSHPRGSQRDF 349
Query: 304 FG----SMNPSARQ-----------IYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQ- 347
FG +P Q IY+T A + +++ +YF +GPV +V IP++
Sbjct: 350 FGHNQRQSHPHGSQRDFFGQSTEFTIYITI-AKNILTWKNIRDYFKKFGPVINVYIPFKP 408
Query: 348 --QKRMFGFVTFVYPETVKLILAKGNPHFV 375
+K FGFVTF +TV L+L+K H +
Sbjct: 409 DNEKHTFGFVTFENDDTVGLLLSKSTSHSI 438
>gi|222637348|gb|EEE67480.1| hypothetical protein OsJ_24899 [Oryza sativa Japonica Group]
Length = 739
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Query: 287 ELHNKFGTCSRPERNDFFGSMNPSARQIYLTFPADS-TFREEDVSNYFSIYGPVHDVRI- 344
E+HN+ + R DFFG S IY+T D +E++ +YF +GPV +V +
Sbjct: 287 EMHNQRQSHPRGRHRDFFGEG--SDFTIYITINFDGGRLTKENIWDYFKKFGPVINVYLS 344
Query: 345 --PYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQ 402
P +K FGFVTF +TV L+L+K PHF+ +V VK Y E K +++K Q
Sbjct: 345 CKPGNEKYTFGFVTFENADTVSLLLSKSTPHFIFGVKVRVKRYLEWTKQEQRKLPQENDH 404
Query: 403 MERGEYSSACS 413
+ + ++C+
Sbjct: 405 FDNVAHRTSCA 415
>gi|414887324|tpg|DAA63338.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 141
Score = 73.2 bits (178), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 310 SARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRM-FGFVTFVYPETVKLILA 368
++ +I++TF F V YFS YG V++V IP QKR FGFV+F+ E+VK IL+
Sbjct: 15 ASNKIFITFNCIHIFTHTSVQKYFSQYGTVNEVIIPIMQKRPDFGFVSFLDSESVKQILS 74
Query: 369 KGNPHFVCDSRVLVKPYKEKGKVQ 392
+ PHF+C + V VK Y+EK +++
Sbjct: 75 ERGPHFICGNEVHVKAYREKHELE 98
>gi|15217947|ref|NP_175564.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|12325375|gb|AAG52634.1|AC024261_21 hypothetical protein; 30893-28595 [Arabidopsis thaliana]
gi|332194557|gb|AEE32678.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 391
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 82/170 (48%), Gaps = 23/170 (13%)
Query: 304 FGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETV 363
FGS + R I F D R +++ +GPV VRIP Q+++++GFV+F ETV
Sbjct: 159 FGSPSEQQRMIAPQFMGDFGSRMSNIN-----FGPVLSVRIPNQKEQVYGFVSFANAETV 213
Query: 364 KLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSGPFDFHF 423
IL + NPH + +S V V V + E S + P G
Sbjct: 214 TTILDQENPHLIGESPVNVTAAATTAGVGWR------------EPFSVGNGPKGAMSRPR 261
Query: 424 GGRMLYNNQEMLRRKLEEQADLQQAIEM--QGRRLMNLQL-HLKNNHLNH 470
R EML+R EQAD QQAIE+ Q RRL NLQL ++N ++H
Sbjct: 262 --RFRNETHEMLQRNT-EQADPQQAIEVEDQIRRLSNLQLPGMENKSIHH 308
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 1 MDSYEATKLVFSRIKAIDPENASKIMGYLLIQDNGDKEMIRLAFGP 46
M +A + RI ++PE+A KI+GY+L QD G E+IRLAF P
Sbjct: 1 MQPGDAIATIIKRILTLEPEHALKIIGYILFQDFGHTELIRLAFCP 46
>gi|224055307|ref|XP_002298472.1| predicted protein [Populus trichocarpa]
gi|222845730|gb|EEE83277.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 21/133 (15%)
Query: 133 DDFHQFQDHLS-----FLDESSELASSTDADHHNHHHLLKRSLSLPVHPNVCFGSDDDPN 187
DD+ F D S F+D +L A+ +H H + S S +VCFG++D
Sbjct: 96 DDYLLFLDGPSSKNKGFMDHKVQLGGYPVANGDSHLHRRRFSES-----DVCFGAED--- 147
Query: 188 SGLGWKHCLYFAKGFCKNGTACKFHHI--HSPEAATAAAIVGSPSKLSEFELSQE---LL 242
G+K CL FA+GFCKNG CKF H + E +VGSP ++ E L Q+ +
Sbjct: 148 ---GYKPCLNFARGFCKNGEGCKFVHGGENIVEVNGGGVLVGSPREMEEHYLQQQEEMTI 204
Query: 243 LRSKASVQQRKLA 255
+++ QQ++LA
Sbjct: 205 MKAAQQHQQQRLA 217
>gi|242033307|ref|XP_002464048.1| hypothetical protein SORBIDRAFT_01g011290 [Sorghum bicolor]
gi|241917902|gb|EER91046.1| hypothetical protein SORBIDRAFT_01g011290 [Sorghum bicolor]
Length = 301
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 81/160 (50%), Gaps = 37/160 (23%)
Query: 178 VCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFE- 236
+C GS D GLGWK CLY+A+G+CKNG+AC+F H P+ AT + G+ + E
Sbjct: 154 LCLGSAD----GLGWKPCLYYARGYCKNGSACRFVHGGLPDDAT--TLAGAKMDTTTLEQ 207
Query: 237 LSQELLLRSKASVQQRKLAAASQFMGSFPYN-------------KC-----MNFLNDTQR 278
Q++L RSK+ QR AAA+ +FPY+ KC N+ QR
Sbjct: 208 QCQDILFRSKS---QRLAAAAAA---AFPYSPTDSLPGSPSAATKCLSLLLQQQQNENQR 261
Query: 279 ------SAALMMGDELHNKFGTCSRPERNDFFGSMNPSAR 312
+AALM+G + +KF R + D MNP +R
Sbjct: 262 AAAATTAAALMLGGDDAHKFSGRPRLDCADLASMMNPGSR 301
>gi|414887325|tpg|DAA63339.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 439
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 313 QIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNP 372
+I +TF ++S F DV NYFS YG V + R +++ M G V+FV ET K I+++ P
Sbjct: 302 KICVTFKSESIFTHTDVQNYFSQYGTVSEERFS-EERHMHGHVSFVDLETAKRIISESGP 360
Query: 373 HFVCDSRVLVKPYKEK 388
HF+C + V K Y+EK
Sbjct: 361 HFICGNEVRAKAYREK 376
>gi|224094721|ref|XP_002310207.1| predicted protein [Populus trichocarpa]
gi|224148376|ref|XP_002336641.1| predicted protein [Populus trichocarpa]
gi|222836422|gb|EEE74829.1| predicted protein [Populus trichocarpa]
gi|222853110|gb|EEE90657.1| predicted protein [Populus trichocarpa]
Length = 96
Score = 62.4 bits (150), Expect = 7e-07, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Query: 164 HLLKRSLSLPVHPNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSPEAATAA 223
HL +R S + CFG++D GLG+K CL FA+ FCKNG +CKF H
Sbjct: 22 HLHRRRFS---ESDACFGAEDG-GFGLGYKPCLCFAREFCKNGESCKFVH-------GGG 70
Query: 224 AIVGSPSKLSEFELS-QELLLRSKAS 248
+VGSP + E L QE ++R KA+
Sbjct: 71 VLVGSPRETEELYLQLQEEMMRMKAA 96
>gi|414878425|tpg|DAA55556.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 430
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 369 KGNPHFVCDSRVLVKPYKEKGKVQEK-KQQQHQQQMERGEYSSACSSPSGPFD 420
+GNPHFVCD RVLVKPYKEKGKV + ++ QH G + C+SP+G D
Sbjct: 361 QGNPHFVCDVRVLVKPYKEKGKVPGRFRKLQHAHH--GGAEFAGCASPTGLLD 411
>gi|413948586|gb|AFW81235.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 265
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 369 KGNPHFVCDSRVLVKPYKEKGKVQEK-KQQQHQQQMERGEYSSACSSPSGPFD 420
+GNPHFVCD RVLVKPYKEKGKV + ++ QH G + C+SP+G D
Sbjct: 196 QGNPHFVCDVRVLVKPYKEKGKVPGRFRKLQHAHH--GGAEFAGCASPTGLLD 246
>gi|218199913|gb|EEC82340.1| hypothetical protein OsI_26639 [Oryza sativa Indica Group]
Length = 243
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 325 REEDVSNYFSI---YGPVHDVRI---PYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDS 378
+E+ NY S+ +GPV +V + P +K FGFVTF + V L+L+K PHF+
Sbjct: 10 KEKFPPNYLSLPRKFGPVINVYLSCKPGNEKYTFGFVTFENADMVSLLLSKSTPHFIFGV 69
Query: 379 RVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSS 414
+V VK Y E K +++K Q + + ++C++
Sbjct: 70 KVRVKRYLEWTKQEQRKLPQENDHFDNVAHRTSCAN 105
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 19/115 (16%)
Query: 287 ELHNKFGTCSRPERNDFFG----SMNPSARQ-----------IYLTFPADSTFREEDVSN 331
ELHN+ + R + DFFG +P Q IY+T A + +++ +
Sbjct: 126 ELHNQRQSHPRGSQRDFFGHNQRQSHPHGSQRDFFGQSTEFTIYITI-AKNILTWKNIRD 184
Query: 332 YFSIYGPVHDVRIPYQ---QKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVK 383
YF +GPV +V IP++ +K FGFVTF +TV L+L+K H + V VK
Sbjct: 185 YFKKFGPVINVYIPFKPDNEKHTFGFVTFENDDTVGLLLSKSTSHSISGVEVRVK 239
>gi|66809481|ref|XP_638463.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74996868|sp|Q54PB2.1|MRD1_DICDI RecName: Full=Multiple RNA-binding domain-containing protein 1;
AltName: Full=RNA-binding motif protein 19 homolog;
AltName: Full=RNA-binding protein 19 homolog
gi|60467060|gb|EAL65101.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 895
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 309 PSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQK---RMFGFVTFVYPETVK- 364
PS++ I P +ST +E + F+ YG + VRIP + R FGFV F+ E K
Sbjct: 793 PSSKIIIKNLPFESTIKE--IRKLFTAYGEIQSVRIPKKPNGGHRGFGFVEFLTEEEAKN 850
Query: 365 LILAKGNPHFVCDSRVLVKPYKEKGK 390
+ A GN HF R LV Y E+ K
Sbjct: 851 AMEALGNSHFY--GRHLVLQYAEQDK 874
>gi|167518996|ref|XP_001743838.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777800|gb|EDQ91416.1| predicted protein [Monosiga brevicollis MX1]
Length = 159
Score = 46.6 bits (109), Expect = 0.037, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 326 EEDVSNYFSIYGPVHDVRI----PYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRV 380
EE +++YF YG V D + Q+ R FGFVTF P++V +L+ G PH VCD +
Sbjct: 13 EESLTDYFQRYGTVIDAVVMRDSVTQRSRGFGFVTFADPKSVTDVLSSG-PHVVCDREI 70
>gi|240849025|ref|NP_001155653.1| nucleolar phosphoprotein-like [Acyrthosiphon pisum]
gi|239788809|dbj|BAH71066.1| ACYPI006149 [Acyrthosiphon pisum]
Length = 175
Score = 46.2 bits (108), Expect = 0.060, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 29/155 (18%)
Query: 324 FREEDVSNYFSIYGPVHDVRIPYQQK----RMFGFVTFVYPETVKLILAKGNPHFVCDSR 379
F E ++ +YF+ +G V ++ IP +K R + FV F+YPE K++ N +++ +
Sbjct: 38 FYENEMKHYFAQFGEVTNINIPKSKKTGKARGYAFVEFLYPEVAKVVAETMN-NYLMHKK 96
Query: 380 VLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSGPFDFHFGGRMLYNNQEMLRRKL 439
+LV Y E +V+ + C+ + P + N+ + R+ +
Sbjct: 97 ILVAKYLEPNQVKSNTFWR-------------CNKNNIP--------LTIKNRSIQRKAM 135
Query: 440 EEQADLQQAIEMQG---RRLMNLQLHLKNNHLNHQ 471
+ Q D Q + + RR+ +LQ LK+ + ++
Sbjct: 136 DRQLDPAQEKQSKAALKRRIQSLQKKLKSKGIEYE 170
>gi|413919194|gb|AFW59126.1| hypothetical protein ZEAMMB73_205521 [Zea mays]
Length = 464
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 31/43 (72%), Gaps = 7/43 (16%)
Query: 426 RMLYN----NQEMLRRKLEEQ---ADLQQAIEMQGRRLMNLQL 461
RML + N+ +LRRKLEE+ A+LQ AIE+Q RRLM LQL
Sbjct: 229 RMLQHSNSANELLLRRKLEEEQQAAELQHAIELQSRRLMGLQL 271
>gi|170086856|ref|XP_001874651.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649851|gb|EDR14092.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1419
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 193 KHCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQR 252
K CL+F+ G C+NGTAC F H+ S E AT S+ E E ++S +QR
Sbjct: 441 KECLFFSLGKCRNGTACPFQHVPSKEPAT-----------SQPEEVDEGWDGPQSSSRQR 489
Query: 253 KLAAASQFM--GSFPYNKCMNFLND 275
+ F G PY N+ +D
Sbjct: 490 SQKRCNHFAKRGVCPYGSSCNYSHD 514
>gi|221220742|gb|ACM09032.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 336
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 18/87 (20%)
Query: 298 PERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIP----YQQKRMFG 353
P + F G +NP A EE + YF +G + + +P ++++R F
Sbjct: 164 PAKKIFVGGLNPEAT-------------EETIREYFGTFGEIESIELPVDLKFKKRRGFI 210
Query: 354 FVTFVYPETVKLILAKGNPHFVCDSRV 380
F+TF TVK L K H VC ++V
Sbjct: 211 FITFKEEATVKKCLEK-KFHNVCGTKV 236
>gi|156382516|ref|XP_001632599.1| predicted protein [Nematostella vectensis]
gi|156219657|gb|EDO40536.1| predicted protein [Nematostella vectensis]
Length = 172
Score = 45.4 bits (106), Expect = 0.096, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 326 EEDVSNYFSIYGPVHDVRIPYQQK----RMFGFVTFVYPETVKLILAKGNPHFVCDSRVL 381
E ++ +FS +GPV DVRI ++ + FGF+TF E K ++ + N F S L
Sbjct: 30 ELELETFFSNFGPVADVRIVCDRRTGLNKGFGFITFSLEEPAKKLIEQNNIDFKGRSLRL 89
Query: 382 VKPYKEKGKVQEKKQQQHQQQMERGEY 408
+ ++KG Q +++ Q+ G++
Sbjct: 90 RQAIRKKGSSQYLTNEEYSQKKGSGQW 116
>gi|223646910|gb|ACN10213.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
gi|223672773|gb|ACN12568.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 336
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 18/87 (20%)
Query: 298 PERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIP----YQQKRMFG 353
P + F G +NP A EE + YF +G + + +P ++++R F
Sbjct: 164 PAKKIFVGGLNPEAT-------------EETIREYFGTFGEIESIELPVDPKFKKRRGFI 210
Query: 354 FVTFVYPETVKLILAKGNPHFVCDSRV 380
F+TF TVK L K H VC ++V
Sbjct: 211 FITFKEEATVKKCLEK-KFHNVCGTKV 236
>gi|209154614|gb|ACI33539.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 359
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 18/87 (20%)
Query: 298 PERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIP----YQQKRMFG 353
P + F G +NP A EE + YF +G + + +P ++++R F
Sbjct: 155 PAKKIFVGGLNPEAT-------------EETIREYFGTFGEIESIELPVDPKFKKRRGFI 201
Query: 354 FVTFVYPETVKLILAKGNPHFVCDSRV 380
F+TF TVK L K H VC ++V
Sbjct: 202 FITFKEESTVKKCLEK-KFHNVCGTKV 227
>gi|330842446|ref|XP_003293189.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
gi|325076506|gb|EGC30286.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
Length = 880
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 309 PSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQK---RMFGFVTFVYPETVK- 364
PS++ I P +ST +E + F+ YG + VRIP + R FGFV F+ E K
Sbjct: 778 PSSKIIIKNLPFESTTKE--IRKLFAAYGEIQSVRIPKKPNGGHRGFGFVEFLTEEEAKN 835
Query: 365 LILAKGNPHFVCDSRVLVKPYKEKGK 390
+ A G+ HF R LV Y E+ K
Sbjct: 836 AMEALGSSHFY--GRHLVLQYAEQDK 859
>gi|196476793|gb|ACG76260.1| heterogeneous nuclear ribonucleoprotein [Amblyomma americanum]
Length = 195
Score = 44.7 bits (104), Expect = 0.17, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 309 PSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQ----QKRMFGFVTFVYPETVK 364
P ++I++ +S E D+ YF +YGPV +V +P+ Q+R F FVTF ++V
Sbjct: 111 PGIKKIFVG-GLESDMPEADIKAYFEMYGPVENVELPFDKAKIQRRQFAFVTFEREDSVD 169
Query: 365 LI 366
L+
Sbjct: 170 LV 171
Score = 39.3 bits (90), Expect = 6.6, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 293 GTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQ----Q 348
G + +N G N R++++ + T +D+ YFS +G V DV I +
Sbjct: 13 GQTNEAAQNGSDGKTNEDERKLFVGGISWDT-DNKDLREYFSKFGVVVDVNIKTDPTTGK 71
Query: 349 KRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQE 393
R FGFVTF + ++ +L K PH V ++ KP K + +++
Sbjct: 72 SRGFGFVTFNAKDAIEAVL-KATPHTVKGKQIDPKPAKARPGIKK 115
>gi|414864203|tpg|DAA42760.1| TPA: hypothetical protein ZEAMMB73_353296 [Zea mays]
Length = 134
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 31/44 (70%), Gaps = 7/44 (15%)
Query: 425 GRMLYN----NQEMLRRKLEEQ---ADLQQAIEMQGRRLMNLQL 461
RML + N+ +LRRKLEEQ A+LQ AIE+Q RRLM LQL
Sbjct: 47 ARMLQHSNNANELLLRRKLEEQQQAAELQHAIELQSRRLMGLQL 90
>gi|403365750|gb|EJY82666.1| hypothetical protein OXYTRI_19721 [Oxytricha trifallax]
Length = 980
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 VCFGSDDDP-NSGLGWK---HCLYFAKGFCKNGTACKFHHIHSPEAATAAAIVGS 228
FGS P + +G K C+YF KG C G AC F H S AA + GS
Sbjct: 43 TVFGSTSSPFQNSIGNKKEIECVYFKKGMCNKGEACDFKHTGSQNAAPTTSAFGS 97
>gi|2244786|emb|CAB10209.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|7268135|emb|CAB78472.1| ribonucleoprotein like protein [Arabidopsis thaliana]
Length = 406
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 29/149 (19%)
Query: 236 ELSQELLLRSKASVQQRKLAAASQFMGSFPYNKCMNFL---------NDTQRSAALMMGD 286
E+SQ +++R K + + R N+C+ FL D +R+ +
Sbjct: 31 EVSQAIVMRDKLTGRPRGFGIRK--------NRCIYFLLRYVLDLGKVDVKRAMSREE-Q 81
Query: 287 ELHNKFGT--CSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRI 344
++ + G SR D + N + + P T +E+ YF +YGPV DV I
Sbjct: 82 QVSGRTGNLNTSRSSGGDAY---NKTKKIFVGGLPP--TLTDEEFRQYFEVYGPVTDVAI 136
Query: 345 PYQQK----RMFGFVTFVYPETVKLILAK 369
Y Q R FGFV+F + V +L K
Sbjct: 137 MYDQATNRPRGFGFVSFDSEDAVDSVLHK 165
>gi|255560757|ref|XP_002521392.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223539470|gb|EEF41060.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 412
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 311 ARQIYLTFPADSTFREEDVSNYFSIYGPV--HDVRIPYQ--QKRMFGFVTFVYPETVKLI 366
AR+I++ T E+++ YFS+YG + H + + ++ + R FGFVTF ++V+ I
Sbjct: 167 ARKIFVG-GIPPTLTEDELGEYFSVYGNIVEHQIMLDHKTGRSRGFGFVTFETEDSVEQI 225
Query: 367 LAKGNPHFVCDSRVLVK 383
+ G H + RV +K
Sbjct: 226 FSTGRTHELGGKRVEIK 242
>gi|301508557|gb|ADK78240.1| heterogeneous nuclear ribonucleoprotein A2 [Schmidtea mediterranea]
Length = 331
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 327 EDVSNYFSIYGPVHDVRIPYQ----QKRMFGFVTFV-YPETVKLILAKGNPHFVCDSRVL 381
E + +YF+ YG + D I + R FGFVTF Y K IL K PH + SRV
Sbjct: 122 EHLRHYFTSYGTITDCEIVTWKDSGESRGFGFVTFDDYDPVDKAILYK--PHQIGSSRVD 179
Query: 382 VKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSGPF 419
VK K +++E +++QH + + S CS+ S F
Sbjct: 180 VKKALSKDEMEEIRRKQHNEPL-----SVNCSTSSDYF 212
>gi|241627626|ref|XP_002408070.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215501115|gb|EEC10609.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 353
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 309 PSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQ----QKRMFGFVTFVYPETVK 364
P ++I++ +S E D+ YF +GPV +V +P+ Q+R F FVTF ++V+
Sbjct: 140 PGIKKIFVG-GLESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAFVTFEREDSVE 198
Query: 365 LI 366
L+
Sbjct: 199 LV 200
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 327 EDVSNYFSIYGPVHDVRI---PYQQK-RMFGFVTFVYPETVKLILAKGNPHFVCDSRVLV 382
+D+ YFS +G V DV I P K R FGFVTF E ++ +L K PH V ++
Sbjct: 75 KDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFTAKEAIEAVL-KATPHTVKGKQIDP 133
Query: 383 KPYKEK 388
KP K +
Sbjct: 134 KPAKAR 139
>gi|427777737|gb|JAA54320.1| Putative glycine rich protein [Rhipicephalus pulchellus]
Length = 355
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 309 PSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQ----QKRMFGFVTFVYPETVK 364
P ++I++ +S E D+ YF +GPV +V +P+ Q+R F FVTF ++V+
Sbjct: 140 PGIKKIFVG-GLESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAFVTFEREDSVE 198
Query: 365 LI 366
L+
Sbjct: 199 LV 200
>gi|244790069|ref|NP_001156444.1| TAR DNA binding protein-like [Acyrthosiphon pisum]
gi|239792762|dbj|BAH72685.1| ACYPI004992 [Acyrthosiphon pisum]
Length = 333
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 207 TACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASVQQRKLAAASQFMGSFPY 266
T CK + + T ++G P +LSE ++ + + K + Q K A+ G F +
Sbjct: 91 TDCKPSKGYHSMSCTDLIVLGLPYQLSETQMREYFVQFGKLVMVQIKRDASGNSKG-FGF 149
Query: 267 NKCMNFLNDTQRSAALMMGDELHNKFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFRE 326
+ + + + ++ AL ++N++ P + + S P +I++ + E
Sbjct: 150 ---IRYEDYSSQAKALGQRHYVNNRWVEVKIPASKEGYYSKVP--HKIFVGRLTED-ISE 203
Query: 327 EDVSNYFSIYGPVHDVRIPYQQKRMFGFVTF 357
D+S YFS YG + DV IP + R FGFVTF
Sbjct: 204 PDLSKYFSQYGEITDVFIP-KPFRAFGFVTF 233
>gi|319898257|ref|YP_004158350.1| type IV secretion system protein VirB9 protein [Bartonella
clarridgeiae 73]
gi|319898796|ref|YP_004158889.1| type IV secretion system protein VirB9 protein [Bartonella
clarridgeiae 73]
gi|319898811|ref|YP_004158904.1| type IV secretion system protein VirB9 protein [Bartonella
clarridgeiae 73]
gi|319402221|emb|CBI75754.1| Type IV secretion system protein VirB9 protein precursor
[Bartonella clarridgeiae 73]
gi|319402760|emb|CBI76307.1| Type IV secretion system protein VirB9 protein precursor
[Bartonella clarridgeiae 73]
gi|319402775|emb|CBI76324.1| Type IV secretion system protein VirB9 protein precursor
[Bartonella clarridgeiae 73]
Length = 286
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 13/112 (11%)
Query: 394 KKQQQHQQQMERGEYSSACSSPSGPFDFHFGGRMLYNNQEMLRRKLEEQADLQQAIEMQG 453
K+ Q + Q+ +G+ S D +F + Y E LR+KL E+A +QQ E
Sbjct: 112 KRSYQFELQVRKGDVSVGN-------DTYFLVKFRYPEDEALRKKLAEEAKVQQKEEEFV 164
Query: 454 RRLMNLQLHLKNNHLNHQFHHGLSNGSPIPSPTLSHSPNNRTRIFPFEGSDE 505
++N+ H + + ++ GSPI PT + N +T F F G++E
Sbjct: 165 DDILNMHEHFGPRNWAY-----VAQGSPIIEPTSVYD-NGKTTTFTFLGNNE 210
>gi|297804878|ref|XP_002870323.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
gi|297316159|gb|EFH46582.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
Length = 407
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 323 TFREEDVSNYFSIYGPVHDVRIPYQQK----RMFGFVTFVYPETVKLILAK 369
T +E+ YF +YGPV DV I Y Q R FGFV+F + V +L K
Sbjct: 120 TLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDRVLHK 170
>gi|242050692|ref|XP_002463090.1| hypothetical protein SORBIDRAFT_02g037623 [Sorghum bicolor]
gi|241926467|gb|EER99611.1| hypothetical protein SORBIDRAFT_02g037623 [Sorghum bicolor]
Length = 250
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Query: 314 IYLTFPADSTFREEDVSNYFSI---------YGPVHDVRIPYQQKRMFGFVTFVYPETVK 364
IY+ F STF +YF +GPV ++I M G+V+F+YPETVK
Sbjct: 166 IYIAFSRQSTFTVRGAWSYFRYCQFAISVRKFGPVTFLQI---LGAMRGWVSFLYPETVK 222
Query: 365 LILA--KGNPHFVCDSRVLVKPYKEK 388
L+L+ + N H + + V + EK
Sbjct: 223 LLLSETRSNRHLILGAVVHIFSSMEK 248
>gi|22328624|ref|NP_193166.2| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|18152698|emb|CAC83517.1| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|110740752|dbj|BAE98475.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|332658011|gb|AEE83411.1| ribonucleoprotein 1 [Arabidopsis thaliana]
Length = 411
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 323 TFREEDVSNYFSIYGPVHDVRIPYQQK----RMFGFVTFVYPETVKLILAK 369
T +E+ YF +YGPV DV I Y Q R FGFV+F + V +L K
Sbjct: 120 TLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHK 170
>gi|170057997|ref|XP_001864728.1| TAR DNA-binding protein 43 [Culex quinquefasciatus]
gi|167877238|gb|EDS40621.1| TAR DNA-binding protein 43 [Culex quinquefasciatus]
Length = 540
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 76/188 (40%), Gaps = 24/188 (12%)
Query: 218 EAATAAAIVGSPSKLSE------FELSQELLLRSKASVQQRKLAAASQFMGSFPYNKCMN 271
T ++G P K +E F++ +LL+ VQ +K A Q G +
Sbjct: 120 RTTTDLIVLGLPWKTTEEGLREYFDVFGDLLV-----VQIKKDAKTGQSKGY----GFIR 170
Query: 272 FLNDTQRSAALMMGDELHNKFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSN 331
F + AL + ++ P D PS +I+L + +D+
Sbjct: 171 FAKFESQMKALSKRHLIDGRWCDVKVPSSKDQMQHQMPS--KIFLGRVTED-MTADDIRE 227
Query: 332 YFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLV---KPYKEK 388
YFS YG V DV IP + R F FVTF+ P + + G H + + V V P E
Sbjct: 228 YFSKYGEVTDVFIP-KPFRAFAFVTFIDPHVAQSLC--GEDHLIKGASVYVSTASPRPEH 284
Query: 389 GKVQEKKQ 396
+ Q+K Q
Sbjct: 285 NRNQQKNQ 292
>gi|15220810|ref|NP_173208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332191496|gb|AEE29617.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 369
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 326 EEDVSNYFSIYGPVHDVRIPYQ----QKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVL 381
E+++ NYF +YG + + +I Y + R FGFVTF ++V + + G H + D +V
Sbjct: 170 EDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVE 229
Query: 382 VK 383
+K
Sbjct: 230 IK 231
>gi|346466281|gb|AEO32985.1| hypothetical protein [Amblyomma maculatum]
Length = 321
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 309 PSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQ----QKRMFGFVTFVYPETVK 364
P ++I++ +S E D+ YF +GPV +V +P+ Q+R F FVTF ++V
Sbjct: 111 PGIKKIFVG-GLESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAFVTFEREDSVD 169
Query: 365 LI 366
L+
Sbjct: 170 LV 171
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 305 GSMNPSARQIY---LTFPADSTFREEDVSNYFSIYGPVHDVRI---PYQQK-RMFGFVTF 357
G N R+++ +++ D+ +D+ YFS +G V DV I P K R FGFVTF
Sbjct: 25 GKTNEDERKLFVGGISWDTDN----KDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTF 80
Query: 358 VYPETVKLILAKGNPHFVCDSRVLVKPYKEK 388
+ ++ +L K PH V ++ KP K +
Sbjct: 81 NAKDAIEAVL-KATPHTVKGKQIDPKPAKAR 110
>gi|432943453|ref|XP_004083222.1| PREDICTED: uncharacterized protein LOC101157905 [Oryzias latipes]
Length = 359
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 184 DDPNSGLGWKHCLYFAKGFCKNGTACKFHHI 214
DD N G K C Y+ KG+CKNG AC + HI
Sbjct: 38 DDRNQGKDIKPCKYYNKGYCKNGKACSYSHI 68
>gi|326507710|dbj|BAJ86598.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518680|dbj|BAJ92501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 467
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 190 LGWKHCLYFAK-GFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKAS 248
LG K C Y+ K G CK G+ CKFHH PE + + + +S L AS
Sbjct: 145 LGEKECSYYIKTGHCKFGSTCKFHHPEGPELGVVSEPPNMYPPVQQLPVSSPLPYPPLAS 204
Query: 249 VQ--QRKLAAASQFMGSFP 265
Q + + S F GS+P
Sbjct: 205 WQLGRPSVLPGSFFPGSYP 223
>gi|448878336|gb|AGE46131.1| arginine/serine-rich splicing factor SCL28 transcript II [Sorghum
bicolor]
Length = 190
Score = 42.4 bits (98), Expect = 0.79, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 309 PSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIP----YQQKRMFGFVTFVYPETVK 364
PSA+ L T R ED+ F +GP+ DV +P ++ R FGFV F YPE
Sbjct: 53 PSAQSGLLIRDISLTARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAA 112
Query: 365 LILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEY 408
+ + N H V R + Y E+ + + Q+ ++ G Y
Sbjct: 113 VAKQEMN-HQVIGGREISIVYAEENR--KTPQEMRRRTRTSGRY 153
>gi|167534320|ref|XP_001748838.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772800|gb|EDQ86448.1| predicted protein [Monosiga brevicollis MX1]
Length = 514
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 310 SARQIYLTFPADSTFR-------EEDVSNYFSIYGPVHDVRIPYQ---QKRMFGFVTFVY 359
SARQ+ T A R + D+S F ++GPV V IP R F FV F
Sbjct: 279 SARQVEETKDATLYVRNIYEDVQDSDLSEAFGVFGPVSRVTIPRSANGDTRGFAFVVFEN 338
Query: 360 PETVKLILAKGNPHFVCDSRVLVKPYKEKGKVQ 392
PE LA GN V +V Y+ K ++Q
Sbjct: 339 PEDRAHALAAGNMLEVGGGKVQYSAYRTKEELQ 371
>gi|347970001|ref|XP_309663.5| AGAP003497-PA [Anopheles gambiae str. PEST]
gi|333466662|gb|EAA05403.6| AGAP003497-PA [Anopheles gambiae str. PEST]
Length = 569
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 76/185 (41%), Gaps = 24/185 (12%)
Query: 221 TAAAIVGSPSKLSE------FELSQELLLRSKASVQQRKLAAASQFMGSFPYNKCMNFLN 274
T ++G P K +E FE ELL+ VQ +K + Q G + F
Sbjct: 115 TDLIVLGLPWKTTEESLREYFETFGELLV-----VQIKKDSKTGQSKGY----GFIRFAR 165
Query: 275 DTQRSAALMMGDELHNKFGTCSRPERNDFFGSMNPSARQIYLTFPADSTFREEDVSNYFS 334
+ AL + +++ P D PS +I+L + +D+ +YFS
Sbjct: 166 FESQMKALSKRHLIDSRWCDVKVPSSKDQTQHQMPS--KIFLGRLTED-INSDDIRDYFS 222
Query: 335 IYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLV---KPYKEKGKV 391
YG V DV IP + R F FVTF+ P + + G H + + V V P E G+
Sbjct: 223 KYGEVTDVFIP-KPFRAFAFVTFIDPHVAQSLC--GEDHLIKGTSVYVSTASPRPEHGRH 279
Query: 392 QEKKQ 396
K Q
Sbjct: 280 HGKGQ 284
>gi|294877864|ref|XP_002768165.1| hypothetical protein Pmar_PMAR002953 [Perkinsus marinus ATCC 50983]
gi|239870362|gb|EER00883.1| hypothetical protein Pmar_PMAR002953 [Perkinsus marinus ATCC 50983]
Length = 585
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 282 LMMGDELHNKFGTCSRPERNDFFGSMNPSA--RQIYLT-FPADSTFREEDVSNYFSIYGP 338
M+G + RP N+ ++NP+ R++++ P S + + NYFS +GP
Sbjct: 137 FMVGMRDYTAGDNIGRPNMNNISNALNPNVTERKLFIGGLP--SLVDRQTLWNYFSQFGP 194
Query: 339 VHDVRIPYQQ----KRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVK 383
+ + + + R FGF+TFV + ++ L+ N H + D V VK
Sbjct: 195 LEESVVMMDKLTGRSRGFGFITFVNVKDLESCLSYPNSHILLDKTVDVK 243
>gi|449688875|ref|XP_002157235.2| PREDICTED: TAR DNA-binding protein 43-like, partial [Hydra
magnipapillata]
Length = 271
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 318 FPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCD 377
PAD++ E+D+ YFS YG + DV +P R FGFVT+ + +++L K H +
Sbjct: 118 LPADTS--EDDLRKYFSDYGELTDVYLP-TPFRGFGFVTYAQADDAQIVLHKS--HSLKG 172
Query: 378 SRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSGPFDFHFGGRMLYNN 431
SR+ V + KG+ + ++ + FDF R++YNN
Sbjct: 173 SRMNVTIAEPKGETRRDFGRRESSGRSSRQ----------TFDFEDMRRLMYNN 216
>gi|242040845|ref|XP_002467817.1| hypothetical protein SORBIDRAFT_01g034590 [Sorghum bicolor]
gi|241921671|gb|EER94815.1| hypothetical protein SORBIDRAFT_01g034590 [Sorghum bicolor]
Length = 190
Score = 42.0 bits (97), Expect = 1.0, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 309 PSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIP----YQQKRMFGFVTFVYPETVK 364
PSA+ L T R ED+ F +GP+ DV +P ++ R FGFV F YPE
Sbjct: 53 PSAQSGLLIRNISLTARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAA 112
Query: 365 LILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEY 408
+ + N H V R + Y E+ + + Q+ ++ G Y
Sbjct: 113 VAKQEMN-HQVIGGREISIVYAEENR--KTPQEMRRRTRTSGRY 153
>gi|119113388|ref|XP_309558.3| AGAP011092-PA [Anopheles gambiae str. PEST]
gi|116131767|gb|EAA05186.3| AGAP011092-PA [Anopheles gambiae str. PEST]
Length = 634
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 7/116 (6%)
Query: 295 CSRPERNDFFGSMNPSARQIYLT-FPADSTFREEDVSNYFSIYGPV--HDVRIPYQQKRM 351
SR ER G +Y+ F D T EE + + F +GP+ H V + R
Sbjct: 166 ISRKEREKELGEKAKLFTNVYVKNFGEDLT--EEALRDMFEKFGPITSHRVMTKDGKSRG 223
Query: 352 FGFVTFVYPETVKLILAKGNPHFVCDSRVLV--KPYKEKGKVQEKKQQQHQQQMER 405
FGFV F PE + + K N + D +VL + K+ + E K++ Q +MER
Sbjct: 224 FGFVAFEKPEDAEEAVQKLNGKELSDGKVLYVGRAQKKNERQMELKRRFEQLKMER 279
>gi|345489599|ref|XP_003426177.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Nasonia vitripennis]
Length = 445
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 326 EEDVSNYFSIYGPVHDVRI----PYQQKRMFGFVTFVYPETVKLILAKGNPHFV------ 375
+E++ YFS YG V D + + R FGFVTF P V L+L G PH +
Sbjct: 26 QENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQNG-PHQLDGRTID 84
Query: 376 ---CDSRVLVKPYKEKG 389
C+ R L KP + G
Sbjct: 85 PKPCNPRTLQKPKRSGG 101
>gi|224029945|gb|ACN34048.1| unknown [Zea mays]
Length = 191
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 14/77 (18%)
Query: 563 LEHILPDNLFASPKKSAGGHITVFSSASAEVDEKNTSSVTSTNNNTKLPSTSLNMSSLNS 622
+EHILPD+ FASP K++ + ++ S+A++ + P++++ + +S
Sbjct: 129 VEHILPDSPFASPSKASTQNGSIISNAASSL--------------FPPPASTMELPPYSS 174
Query: 623 CLLQMSRFSSGQGTIGM 639
C Q RFS G IG+
Sbjct: 175 CFFQAPRFSPGHEAIGL 191
>gi|67618508|ref|XP_667596.1| cell cycle control cwc2-related protein [Cryptosporidium hominis
TU502]
gi|54658749|gb|EAL37369.1| cell cycle control cwc2-related protein [Cryptosporidium hominis]
Length = 342
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 158 DHHNHHHLLKRSLSLPVHPNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACK-FHHIHS 216
D+ + ++ +P + +D DPN+ + CLYFAKG C NG+ CK FH I +
Sbjct: 52 DYDKRGKVASKTKCIPDKDSGWTKADQDPNTKSYF--CLYFAKGACVNGSKCKYFHRIPT 109
Query: 217 PE 218
E
Sbjct: 110 EE 111
>gi|345489601|ref|XP_001600266.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Nasonia vitripennis]
Length = 376
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 326 EEDVSNYFSIYGPVHDVRI----PYQQKRMFGFVTFVYPETVKLILAKGNPHFV------ 375
+E++ YFS YG V D + + R FGFVTF P V L+L G PH +
Sbjct: 26 QENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQNG-PHQLDGRTID 84
Query: 376 ---CDSRVLVKPYKEKG 389
C+ R L KP + G
Sbjct: 85 PKPCNPRTLQKPKRSGG 101
>gi|293335189|ref|NP_001170290.1| uncharacterized protein LOC100384253 [Zea mays]
gi|224034841|gb|ACN36496.1| unknown [Zea mays]
Length = 123
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 544 DGNDKEE---KPNSDENDLCDSLEHILPDNLFASPKKSAGGHITVFSSASAEVDEKNTSS 600
+G DKEE + + D D S EH LPD+ FASP KSA V S +A E S
Sbjct: 26 NGGDKEESACEASPDAADSDQSGEHNLPDSPFASPTKSA---ALVHDSFAATEPENTASC 82
Query: 601 VTST--NNNTKLPSTSLNMSSLNSCLLQMSRFSSGQGTIGM 639
V S + L +L + S +S M R SS G +GM
Sbjct: 83 VGSKIDGGSNHLRPPALEIPSPSSYFFPMRRLSSDHGAMGM 123
>gi|8778468|gb|AAF79476.1|AC022492_20 F1L3.34 [Arabidopsis thaliana]
Length = 392
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 326 EEDVSNYFSIYGPVHDVRIPYQ----QKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVL 381
E+++ NYF +YG + + +I Y + R FGFVTF ++V + + G H + D +V
Sbjct: 193 EDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVE 252
Query: 382 VK 383
+K
Sbjct: 253 IK 254
>gi|357447963|ref|XP_003594257.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483305|gb|AES64508.1| RNA-binding protein, putative [Medicago truncatula]
Length = 411
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 322 STFREEDVSNYFSIYGPVHDVRIPY----QQKRMFGFVTFVYPETVKLILAK 369
ST E D NYF +G + DV + Y Q+ R FGF+T+ E V+ +L K
Sbjct: 45 STVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHK 96
>gi|66475976|ref|XP_627804.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|32399053|emb|CAD98293.1| cell cycle control cwc2-related protein, possible [Cryptosporidium
parvum]
gi|46229212|gb|EAK90061.1| conserved hypothetical protein [Cryptosporidium parvum Iowa II]
gi|323508959|dbj|BAJ77372.1| cgd6_4770 [Cryptosporidium parvum]
Length = 342
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 158 DHHNHHHLLKRSLSLPVHPNVCFGSDDDPNSGLGWKHCLYFAKGFCKNGTACK-FHHIHS 216
D+ + ++ +P + +D DPN+ + CLYFAKG C NG+ CK FH I +
Sbjct: 52 DYDKRGKVASKTKCIPDKDSGWTKADQDPNTKSYF--CLYFAKGACVNGSKCKYFHRIPT 109
Query: 217 PE 218
E
Sbjct: 110 EE 111
>gi|332250675|ref|XP_003274476.1| PREDICTED: probable RNA-binding protein 19 [Nomascus leucogenys]
Length = 997
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 310 SARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPY----QQKRMFGFVTFVYPE 361
S R P ST EED+ FS YGP+ ++ P ++ + FGFVTF++PE
Sbjct: 438 SGRLFVRNLPYTST--EEDLEKLFSKYGPLSELHYPIDSLTKKPKGFGFVTFMFPE 491
>gi|414870056|tpg|DAA48613.1| TPA: hypothetical protein ZEAMMB73_895706 [Zea mays]
Length = 330
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 185 DPNSGLGWKHCLYFAKGFCKNGTACKFHH 213
D S W+ C+Y+A+ +CKNG++C+F H
Sbjct: 276 DAESAASWRPCMYYAREYCKNGSSCRFFH 304
>gi|390364931|ref|XP_787866.3| PREDICTED: uncharacterized protein LOC582835 [Strongylocentrotus
purpuratus]
Length = 667
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 327 EDVSNYFSIYGPVHDVRIP---YQQKRMFGFVTFVYPETVKLILAK 369
ED+ YF+ YG V DV IP +KR+FGFVTF +TV +++K
Sbjct: 589 EDLKAYFTNYGVVTDVSIPPSTEGKKRVFGFVTFEDSDTVDKLISK 634
>gi|255582445|ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223528341|gb|EEF30383.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 484
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 305 GSMNPS-ARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPY----QQKRMFGFVTFVY 359
GS P R+I++ A ST E D YF YG + DV + Y Q+ R FGF+T+
Sbjct: 99 GSPGPGRTRKIFVGGLA-STVTETDFRKYFEQYGTITDVVVMYDHNTQRPRGFGFITYDS 157
Query: 360 PETVKLILAK 369
E V +L K
Sbjct: 158 EEAVDKVLMK 167
>gi|448878334|gb|AGE46130.1| arginine/serine-rich splicing factor SCL28 transcript I [Sorghum
bicolor]
Length = 241
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 309 PSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPY----QQKRMFGFVTFVYPETVK 364
PSA+ L T R ED+ F +GP+ DV +P ++ R FGFV F YPE
Sbjct: 53 PSAQSGLLIRNISLTARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAA 112
Query: 365 LILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEY 408
+ + N H V R + Y E+ + + Q+ ++ G Y
Sbjct: 113 VAKQEMN-HQVIGGREISIVYAEENR--KTPQEMRRRTRTSGRY 153
>gi|357447959|ref|XP_003594255.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483303|gb|AES64506.1| RNA-binding protein, putative [Medicago truncatula]
Length = 446
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 322 STFREEDVSNYFSIYGPVHDVRIPY----QQKRMFGFVTFVYPETVKLILAK 369
ST E D NYF +G + DV + Y Q+ R FGF+T+ E V+ +L K
Sbjct: 80 STVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHK 131
>gi|148907387|gb|ABR16827.1| unknown [Picea sitchensis]
Length = 432
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 20/116 (17%)
Query: 308 NPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPY----QQKRMFGFVTFVYPETV 363
P ++I++ A T E+D YF +G + DV + Y Q+ R FGF+TF E V
Sbjct: 100 GPRTKKIFVGGLA-PTVTEDDFKGYFEQFGTITDVVVMYDHISQRPRGFGFITFDSEEAV 158
Query: 364 KLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSGPF 419
++ K N H + D V VK + ++M G + A SSP+GP+
Sbjct: 159 DKVVMK-NFHELHDKTVEVK-------------RALPKEMSPGS-ARARSSPAGPY 199
>gi|357628443|gb|EHJ77777.1| hypothetical protein KGM_04418 [Danaus plexippus]
Length = 414
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 326 EEDVSNYFSIYGPVHDVRI----PYQQKRMFGFVTFVYPETVKLILAKGNPHFV------ 375
+E++ YFS YG V D + + R FGFVTF P V ++L G PH +
Sbjct: 26 QENLQRYFSRYGDVIDCVVMKNSESGRSRGFGFVTFAEPSLVNVVLQNG-PHQLDGRTID 84
Query: 376 ---CDSRVLVKPYKEKG 389
C+ R L KP + G
Sbjct: 85 PKPCNPRTLQKPKRGGG 101
>gi|312373745|gb|EFR21436.1| hypothetical protein AND_17061 [Anopheles darlingi]
Length = 609
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 327 EDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLV---K 383
+D+ YFS YG V DV IP + R F FVTF+ P + + G H + + V V
Sbjct: 215 DDIRGYFSKYGEVADVFIP-KPFRAFAFVTFMDPHVAQSLC--GEDHLIKSTSVYVSTAS 271
Query: 384 PYKEKGKVQEKKQ 396
P E G+ + K Q
Sbjct: 272 PRPEHGRYRGKNQ 284
>gi|242006645|ref|XP_002424159.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
gi|212507484|gb|EEB11421.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
Length = 423
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 14/77 (18%)
Query: 326 EEDVSNYFSIYGPVHDVRI----PYQQKRMFGFVTFVYPETVKLILAKGNPHFV------ 375
+E + YFS YG V D + + R FGFVTF P V ++L G PH +
Sbjct: 32 QEALQRYFSRYGDVVDCVVMKNTESGRSRGFGFVTFADPTNVGVVLQNG-PHVLDGRTID 90
Query: 376 ---CDSRVLVKPYKEKG 389
C+ R L KP + G
Sbjct: 91 PKPCNPRTLSKPKRNNG 107
>gi|429851537|gb|ELA26723.1| ccch zinc finger and rrm domain-containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 706
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 82/220 (37%), Gaps = 33/220 (15%)
Query: 169 SLSLPVHPNVC-FGSDDDPNSGLGWKHCLYFA-KGFCKNGTACKFHHIHSPEAATAAAIV 226
S +P H V +G+ P + C FA KG+C G++C++ H P A
Sbjct: 187 SPRMPAHSQVPPYGTPQGPRRNR--QKCRDFATKGYCARGSSCQYDHGSEPIWLPANDAT 244
Query: 227 GSPSKLSEFELSQELLLRSKASVQQRKLAAASQFMGSFPYNKCMNFLNDTQRSAALMMGD 286
P +LSEF++ ++ S+ A Q M +F +A
Sbjct: 245 NGPPQLSEFDVQAAAMMMSQ------NFQAMQQLMEAF--------------NAERGGRG 284
Query: 287 ELHNKFGTCSRPERNDF-FGSMNPSARQIYLTFPA----DSTFREEDVSNYFSIYGPVHD 341
+ G SR +N F + P+ + T D EE V +FS +G + D
Sbjct: 285 GKKGRQGAKSRRRQNRASFSAEGPAIDETRTTIVVENIPDKHMSEESVRGFFSEFGTIED 344
Query: 342 VRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVL 381
+ + Q++ Y A +P + D+R +
Sbjct: 345 IWMQPQRR----LAVLKYDSWAAANAAYRSPKAIFDNRFV 380
>gi|413919657|gb|AFW59589.1| hypothetical protein ZEAMMB73_140082 [Zea mays]
Length = 293
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/20 (85%), Positives = 18/20 (90%)
Query: 314 IYLTFPADSTFREEDVSNYF 333
IYL FPADST+ EEDVSNYF
Sbjct: 255 IYLMFPADSTYSEEDVSNYF 274
>gi|293336544|ref|NP_001168743.1| uncharacterized protein LOC100382538 [Zea mays]
gi|223972773|gb|ACN30574.1| unknown [Zea mays]
gi|413936749|gb|AFW71300.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
gi|413936750|gb|AFW71301.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
Length = 384
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 308 NPSARQIYLT-FPADSTFREEDVSNYFSIYGPV--HDVRIPYQ--QKRMFGFVTFVYPET 362
P R+I++ PA T E+++ ++FS+YG V H + + + + R FGFVTF ++
Sbjct: 140 GPKTRKIFIGGLPASLT--EDELKDHFSLYGKVLEHQIMLDHSTGRSRGFGFVTFESEDS 197
Query: 363 VKLILAKGNPHFVCDSRVLVK 383
V+ ++++G + +V +K
Sbjct: 198 VERVISEGRMRDLGGKQVEIK 218
>gi|389615548|dbj|BAM20734.1| heterogeneous nuclear ribonucleoprotein, partial [Papilio polytes]
Length = 140
Score = 40.8 bits (94), Expect = 2.5, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 326 EEDVSNYFSIYGPVHDVRIPYQ----QKRMFGFVTFVYPETVKLILAKGNPHFV------ 375
+E++ YFS YG V D + + R FGFVTF P V ++L G PH +
Sbjct: 26 QENLQRYFSRYGDVIDCVVMKNSESGRSRGFGFVTFAEPSLVNVVLQNG-PHQLDGRTID 84
Query: 376 ---CDSRVLVKPYKEKG 389
C+ R L KP + G
Sbjct: 85 PKPCNPRTLQKPKRGGG 101
>gi|289741549|gb|ADD19522.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 531
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 327 EDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYK 386
+D+ +YFS +G V DV IP + R F FVTF+ PE + + G H + V V
Sbjct: 206 DDLKDYFSKFGEVTDVFIP-KPFRAFSFVTFLDPEVAQSLC--GEDHIIKGISVHVSNAA 262
Query: 387 EKGKVQEKKQQQHQQQMERGEYSSACSSP-SGPFDFHFGGR 426
KG +Q R S +P SGP +F GGR
Sbjct: 263 PKG----------EQNRGRNSPGSVSLAPHSGPINFG-GGR 292
>gi|297847276|ref|XP_002891519.1| hypothetical protein ARALYDRAFT_337099 [Arabidopsis lyrata subsp.
lyrata]
gi|297337361|gb|EFH67778.1| hypothetical protein ARALYDRAFT_337099 [Arabidopsis lyrata subsp.
lyrata]
Length = 1163
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 13/99 (13%)
Query: 194 HCLYFAKGFCKNGTACKFHHIHSPEAAT--AAAIVGSPSK---LSEFELSQELLLRSKAS 248
C+YF G+C+ G +CKF H S E T A I+ P + LSE L K
Sbjct: 433 QCIYFNSGYCRYGNSCKFSHRISGEEKTSSVATIMKIPERKRILSE--------LPEKIK 484
Query: 249 VQQRKLAAASQFMGSFPYNKCMNFLNDTQRSAALMMGDE 287
+ + ++ + K F+ +T+R +L + D+
Sbjct: 485 KDMESVNISEKYAKTCLGEKRYGFIKETKRIGSLKVSDD 523
>gi|193716167|ref|XP_001946745.1| PREDICTED: RNA-binding protein squid-like [Acyrthosiphon pisum]
Length = 290
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 323 TFREEDVSNYFSIYGPVHDVRI---PYQ-QKRMFGFVTFVYPETVKLILAKGNPHFVCDS 378
T E+++ YF+ YG + ++ I P+ Q R F FV FV +TV +LA G+ HF+ +
Sbjct: 30 TISEKELREYFTQYGEIENINIKTDPFSGQSRGFAFVQFVNAKTVDDLLAAGD-HFIANK 88
Query: 379 RV 380
+V
Sbjct: 89 KV 90
>gi|354480942|ref|XP_003502662.1| PREDICTED: DAZ-associated protein 1-like [Cricetulus griseus]
Length = 495
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 59/153 (38%), Gaps = 18/153 (11%)
Query: 254 LAAASQFMGSFPYNKCMNFLNDTQRSAALMMGDELHNKFGTCSRPERNDFFGSMNPSARQ 313
L A + GSFP + + + R + + F S P R F G ++ S Q
Sbjct: 53 LWALACHTGSFPGSVPLTGPSFAARLFLVSAVVWIQKSFAESSVPRRKLFVGGLDWSTTQ 112
Query: 314 IYLTFPADSTFREEDVSNYFSIYGPVHDVRI----PYQQKRMFGFVTFVYPETVKLILAK 369
E + +YFS YG V D I Q R FGFV F P V +LA
Sbjct: 113 -------------ETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 159
Query: 370 GNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQ 402
PH + + KP +G E+ + + Q
Sbjct: 160 -RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQ 191
>gi|412986499|emb|CCO14925.1| RNA-binding protein [Bathycoccus prasinos]
Length = 716
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 323 TFREEDVSNYFSIYGPVHDVRIPYQQK----RMFGFVTFVYPETVKLI 366
T EE+V +FS YGPV VR+ Y ++ + +GFV F +PE +
Sbjct: 464 TATEEEVGWFFSQYGPVARVRLIYDKETGASKRYGFVEFAHPEIAAAV 511
>gi|357447957|ref|XP_003594254.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483302|gb|AES64505.1| RNA-binding protein, putative [Medicago truncatula]
Length = 522
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 322 STFREEDVSNYFSIYGPVHDVRIPY----QQKRMFGFVTFVYPETVKLILAK 369
ST E D NYF +G + DV + Y Q+ R FGF+T+ E V+ +L K
Sbjct: 156 STVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHK 207
>gi|224135041|ref|XP_002327552.1| predicted protein [Populus trichocarpa]
gi|222836106|gb|EEE74527.1| predicted protein [Populus trichocarpa]
Length = 160
Score = 40.0 bits (92), Expect = 3.4, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 323 TFREEDVSNYFSIYGPVHDVRIPYQQK----RMFGFVTFVYPETVKLILAKGNPH 373
+ E+++ YFS+YG + D +I K R FGFVTF + V+ I ++G H
Sbjct: 99 SLTEDELKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDIEDAVEQIFSEGRTH 153
>gi|194690988|gb|ACF79578.1| unknown [Zea mays]
Length = 227
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 103/247 (41%), Gaps = 54/247 (21%)
Query: 427 MLYNN----QEMLRRKLEEQADLQQA---IEMQGRRLMNLQLHLKNNHLNHQFHHGLSNG 479
M+Y N + LRRKLEEQ + IE++GRR M L L L H HH S+
Sbjct: 1 MMYGNVAGHEAFLRRKLEEQQQAAELQQAIELEGRRFMGLHL-LDLKSRGH--HHLGSSP 57
Query: 480 SPIPSPTL----------SHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQITDHLFHR 529
+ + + TL S + N+ F E ++ + P + + + S
Sbjct: 58 AAMATTTLGQGDDGCKGRSANGNDNAVAFHLEDANIQDTPTKMNSNSLAMSGGPAAGAGG 117
Query: 530 EENRTSNHNKNNNSDGNDKEE-KPNSDEND-----------LC-----DSLEHILPDNLF 572
E ++ + DG+ K+ P +E C +EHILPD+ F
Sbjct: 118 EHEE---QQQDGDGDGSPKQAVNPGKEEKTESGPVTATPIVACGFQESGVVEHILPDSPF 174
Query: 573 ASPKKSAGGHITVFSSASAEVDEKNTSSVTSTNNNTKLPSTSLNMSSLNSCLLQMSRFSS 632
ASP K++ + ++ S+A++ + P++++ + +SC Q RFS
Sbjct: 175 ASPSKASTQNGSIISNAASSL--------------FPPPASTMELPPYSSCFFQAPRFSP 220
Query: 633 GQGTIGM 639
G IG+
Sbjct: 221 GHEAIGL 227
>gi|403222919|dbj|BAM41050.1| DAZ-associated protein 1 [Theileria orientalis strain Shintoku]
Length = 395
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 311 ARQIYLT-FPADSTFREEDVSNYFSIYGPVHDVRIPYQQ-----KRMFGFVTFVYPETVK 364
A +I++T P D+T ++D+ YF +G V+D P Q + FGF++F ET++
Sbjct: 113 AHRIFITRIPFDAT--KDDLEEYFKKFGTVYDAYCPKQSNYSTLNKGFGFISFDSEETIQ 170
Query: 365 LILAKGNPHFVCDSRVLV 382
+ + +PH + V+V
Sbjct: 171 KVF-ETSPHVIMGREVIV 187
>gi|81097712|gb|AAI09369.1| Msi2h protein [Mus musculus]
Length = 193
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 327 EDVSNYFSIYGPVHD---VRIPYQQK-RMFGFVTFVYPETVKLILAKGNPHFVCDSRVLV 382
+ + +YFS +G + + +R P ++ R FGFVTF P +V +L G PH DS+ +
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL--GQPHHELDSKTID 92
Query: 383 KPYKEKGKVQEKKQQQ 398
+ Q K Q+Q
Sbjct: 93 PKVAFPRRAQPKSQEQ 108
>gi|326504506|dbj|BAJ91085.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508622|dbj|BAJ95833.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 239
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 323 TFREEDVSNYFSIYGPVHDVRIPY----QQKRMFGFVTFVYPETVKLILAKGNPHFVCDS 378
T R ED+ F +GP+ DV +P ++ R FGFV F +PE + N +C
Sbjct: 66 TARLEDIRGPFEQFGPIKDVYLPRNFHTKELRGFGFVKFRHPEDAAYAKQEMNHQVICGR 125
Query: 379 RVLV 382
+ +
Sbjct: 126 EITI 129
>gi|222101818|gb|ACM44033.1| hnRNPA/B-like 28 [Bombyx mori]
Length = 256
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 326 EEDVSNYFSIYGPVHDVRIPYQ----QKRMFGFVTFVYPETVKLILAKGNPHFV------ 375
+E++ YFS YG V D + + R FGFVTF P V L+L G PH +
Sbjct: 26 QENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG-PHQLDGRTID 84
Query: 376 ---CDSRVLVKPYKEKG 389
C+ R L KP + G
Sbjct: 85 PKPCNPRTLQKPKRGGG 101
>gi|294937440|ref|XP_002782069.1| Ser/Arg-rich splicing factor, putative [Perkinsus marinus ATCC
50983]
gi|239893400|gb|EER13864.1| Ser/Arg-rich splicing factor, putative [Perkinsus marinus ATCC
50983]
Length = 408
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 326 EEDVSNYFSIYGPVHDVRIPYQQ----KRMFGFVTFVYPETVKLILAKGNPHFVCDSRVL 381
++++ +YFS +G + D + + R FGF+TF++P+ ++ L K +PH V D +
Sbjct: 66 KQELKDYFSQFGEIEDSIVMMDRVTGRSRGFGFITFLHPQDMEACLDK-SPHVVMDKTID 124
Query: 382 VKPYKEKG 389
VK E G
Sbjct: 125 VKRAVEGG 132
>gi|74096079|ref|NP_001027721.1| CiMsi protein [Ciona intestinalis]
gi|6681425|dbj|BAA88672.1| CiMsi [Ciona intestinalis]
Length = 393
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 327 EDVSNYFSIYGPVHDVRIPYQQK----RMFGFVTFVYPETVKLILAKGNPHFVCDSRVLV 382
E + +YF YG V D + ++ R FGFVTF P +V ++ K PH + + +
Sbjct: 24 EGLRSYFENYGEVSDCVLMKDKETGFSRGFGFVTFTNPSSVAAVV-KARPHNLDNKMIDP 82
Query: 383 KPYKEKGKVQEKK 395
KP K Q+KK
Sbjct: 83 KPCTTKAAQQQKK 95
>gi|162462398|ref|NP_001104824.1| hnRNPA/B-like 28 [Bombyx mori]
gi|161334098|gb|ABX60898.1| hnRNPA/B-like protein [Bombyx mori]
Length = 250
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 326 EEDVSNYFSIYGPVHDVRI----PYQQKRMFGFVTFVYPETVKLILAKGNPHFV------ 375
+E++ YFS YG V D + + R FGFVTF P V L+L G PH +
Sbjct: 20 QENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG-PHQLDGRTID 78
Query: 376 ---CDSRVLVKPYKEKG 389
C+ R L KP + G
Sbjct: 79 PKPCNPRTLQKPKRGGG 95
>gi|224126191|ref|XP_002329613.1| predicted protein [Populus trichocarpa]
gi|222870352|gb|EEF07483.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 40.0 bits (92), Expect = 4.3, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 323 TFREEDVSNYFSIYGPVHDVRIPYQQK----RMFGFVTFVYPETVKLILAKGNPH 373
+ E+++ YFS+YG + D +I K R FGFVTF + V+ I ++G H
Sbjct: 98 SLTEDELKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDSEDAVERIFSEGRTH 152
>gi|307105138|gb|EFN53389.1| hypothetical protein CHLNCDRAFT_36600 [Chlorella variabilis]
Length = 321
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 307 MNPSARQIYLT-FPADSTFREEDVSNYFSIYGPVHDVRIPYQ----QKRMFGFVTFVYPE 361
M P AR++++ D+T E+ YFS +G V + +I + R FGFVTF
Sbjct: 88 MKPKARKVFVGGLSPDTT--EDQFREYFSQFGEVVEAQIMQDHMSGRSRGFGFVTFAEDA 145
Query: 362 TVKLILAKGNPHFVCDSRVLVKPYKEK 388
+ + + A G H + +V VKP K
Sbjct: 146 SAESVFAAGTMHDLGGKKVEVKPATPK 172
>gi|357616936|gb|EHJ70495.1| hypothetical protein KGM_10405 [Danaus plexippus]
Length = 441
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 327 EDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLV 382
+D+ +YFS +G V DV +P + R FGFVTF+ PE + + G H + + V V
Sbjct: 218 DDLRDYFSRFGEVTDVFVP-RPFRAFGFVTFLDPEVAQSLC--GEDHVIKGASVSV 270
>gi|427795623|gb|JAA63263.1| Putative tar dna-binding protein 43, partial [Rhipicephalus
pulchellus]
Length = 420
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 327 EDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLV 382
+D+ +YFS YG V DV IP + R F FVTFV P+ + + G H + + + V
Sbjct: 142 DDLRDYFSKYGEVTDVFIP-KPFRAFAFVTFVDPDVAQSLC--GEDHIIRGTSIHV 194
>gi|357140379|ref|XP_003571746.1| PREDICTED: uncharacterized protein LOC100831046 isoform 1
[Brachypodium distachyon]
Length = 403
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 308 NPSARQIYLT-FPADSTFREEDVSNYFSIYGPV--HDVRIPYQ--QKRMFGFVTFVYPET 362
P R+I++ PA + E+D+ ++FS YG V H + + + + R FGFVTF ++
Sbjct: 150 GPKTRKIFVGGLPA--SLSEDDLRDHFSSYGKVVEHQIMVDHSTGRSRGFGFVTFESEDS 207
Query: 363 VKLILAKGNPHFVCDSRVLVK 383
V+ ++++G + +V +K
Sbjct: 208 VERVISEGRMRDLGGKQVEIK 228
>gi|145347002|ref|XP_001417969.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578197|gb|ABO96262.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 218
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 321 DSTFREEDVSNYFSIYGPVHDV---RIPY-QQKRMFGFVTFVYPETVKLILAKGNPHFVC 376
D T E V N+FS +GPV +V R P+ Q R FGF+TF ++ K +L + H +
Sbjct: 21 DRTVDEGVVRNFFSQFGPVMEVLVMRDPHNHQSRGFGFITFQRDDSAKQVL-QNRYHDML 79
Query: 377 DSRVLVKPYKEKGKV 391
RV VK +G+
Sbjct: 80 GKRVEVKSAVPRGQA 94
>gi|326531676|dbj|BAJ97842.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 308 NPSARQIYLT-FPADSTFREEDVSNYFSIYGPV--HDVRIPYQ--QKRMFGFVTFVYPET 362
P R+I++ P ST E+D+ ++FS YG V H + + + + R FGFVTF ++
Sbjct: 147 GPKTRKIFVGGLP--STLTEDDLRDHFSSYGNVVEHQIMVDHSTGRSRGFGFVTFESEDS 204
Query: 363 VKLILAKGNPHFVCDSRVLVK 383
V+ ++++G + +V +K
Sbjct: 205 VERVISEGRMRDLGGKQVEIK 225
>gi|326487243|dbj|BAJ89606.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506666|dbj|BAJ91374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 308 NPSARQIYLT-FPADSTFREEDVSNYFSIYGPV--HDVRIPYQ--QKRMFGFVTFVYPET 362
P R+I++ P ST E+D+ ++FS YG V H + + + + R FGFVTF ++
Sbjct: 147 GPKTRKIFVGGLP--STLTEDDLRDHFSSYGNVVEHQIMVDHSTGRSRGFGFVTFESEDS 204
Query: 363 VKLILAKGNPHFVCDSRVLVK 383
V+ ++++G + +V +K
Sbjct: 205 VERVISEGRMRDLGGKQVEIK 225
>gi|226504024|ref|NP_001140489.1| uncharacterized protein LOC100272550 [Zea mays]
gi|194699696|gb|ACF83932.1| unknown [Zea mays]
gi|448878232|gb|AGE46079.1| arginine/serine-rich splicing factor SCL28 transcript II [Zea mays]
Length = 188
Score = 39.7 bits (91), Expect = 5.0, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 323 TFREEDVSNYFSIYGPVHDVRIP----YQQKRMFGFVTFVYPETVKLILAKGNPHFVCDS 378
T R ED+ F +GP+ DV +P ++ R FGFV F YPE + + H V
Sbjct: 67 TARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAA-VAKREMHHQVIGG 125
Query: 379 RVLVKPYKEKGKVQEKKQQQHQQQMERGEY 408
R + Y E+ + + Q+ + G Y
Sbjct: 126 REISIVYAEENR--KTPQEMRMRTRTSGRY 153
>gi|212276326|ref|NP_001130962.1| Ribonucleoprotein like protein isoform 1 [Zea mays]
gi|194690564|gb|ACF79366.1| unknown [Zea mays]
gi|195616124|gb|ACG29892.1| ribonucleoprotein like protein [Zea mays]
gi|224030751|gb|ACN34451.1| unknown [Zea mays]
gi|414592149|tpg|DAA42720.1| TPA: Ribonucleoprotein like protein isoform 1 [Zea mays]
gi|414592150|tpg|DAA42721.1| TPA: Ribonucleoprotein like protein isoform 2 [Zea mays]
Length = 370
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 13/115 (11%)
Query: 307 MNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQ----QKRMFGFVTFVYPET 362
+N ++++++ D T EE+ YF +G V DV + Y + R FGFVTF E
Sbjct: 132 VNYGSKKVFVGGLQDDT-TEEEFRAYFETFGTVTDVAVIYDSATNRSRGFGFVTFDSEEA 190
Query: 363 VKLILAKGNPHFVCDSRVLVKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSG 417
V ++ + + H + ++V + K+ K +Q+ + RG SS P+G
Sbjct: 191 VGKVMRQ-SFHDLNGTKV-------EAKIAIPKDEQYYRNRGRGARSSGGRVPAG 237
>gi|224161731|ref|XP_002338367.1| predicted protein [Populus trichocarpa]
gi|222872031|gb|EEF09162.1| predicted protein [Populus trichocarpa]
Length = 151
Score = 39.7 bits (91), Expect = 5.3, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 323 TFREEDVSNYFSIYGPVHDVRIPYQQK----RMFGFVTFVYPETVKLILAKGNPH 373
+ E+++ YFS+YG + D +I K R FGFVTF + V+ I ++G H
Sbjct: 83 SLTEDELKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDSEDAVERIFSEGRTH 137
>gi|357140381|ref|XP_003571747.1| PREDICTED: uncharacterized protein LOC100831046 isoform 2
[Brachypodium distachyon]
Length = 383
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 308 NPSARQIYLT-FPADSTFREEDVSNYFSIYGPV--HDVRIPYQ--QKRMFGFVTFVYPET 362
P R+I++ PA + E+D+ ++FS YG V H + + + + R FGFVTF ++
Sbjct: 130 GPKTRKIFVGGLPA--SLSEDDLRDHFSSYGKVVEHQIMVDHSTGRSRGFGFVTFESEDS 187
Query: 363 VKLILAKGNPHFVCDSRVLVK 383
V+ ++++G + +V +K
Sbjct: 188 VERVISEGRMRDLGGKQVEIK 208
>gi|328723850|ref|XP_003247957.1| PREDICTED: TAR DNA-binding protein 43-like isoform 2 [Acyrthosiphon
pisum]
gi|328723852|ref|XP_003247958.1| PREDICTED: TAR DNA-binding protein 43-like isoform 3 [Acyrthosiphon
pisum]
Length = 392
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 327 EDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLV 382
+D+ YFS +G V +V +P R F FVTF+ PE + G H V D V V
Sbjct: 206 DDIREYFSKFGEVINVFVPKNPFRGFAFVTFLDPEVAASLC--GEDHIVKDVSVRV 259
>gi|326934489|ref|XP_003213321.1| PREDICTED: DAZ-associated protein 1-like [Meleagris gallopavo]
Length = 397
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 321 DSTFREEDVSNYFSIYGPVHDVRI----PYQQKRMFGFVTFVYPETVKLILAKGNPHFVC 376
D + +E + NYFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 38 DWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 96
Query: 377 DSRVLVKPYKEKGKVQEKKQQQHQQQ 402
+ KP +G E+ + + Q
Sbjct: 97 GRNIDPKPCTPRGMQPERTRPKEGWQ 122
>gi|225460779|ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267443 [Vitis vinifera]
Length = 478
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 305 GSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPY----QQKRMFGFVTFVYP 360
GS P + ST E D YF +G ++DV + Y Q+ R FGF+T+
Sbjct: 98 GSPGPGRTKKIFVGGLASTVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 361 ETVKLILAK 369
E V+ +L K
Sbjct: 158 EAVERVLHK 166
>gi|147783406|emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera]
Length = 482
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 305 GSMNPSARQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPY----QQKRMFGFVTFVYP 360
GS P + ST E D YF +G ++DV + Y Q+ R FGF+T+
Sbjct: 98 GSPGPGRTKKIFVGGLASTVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 361 ETVKLILAK 369
E V+ +L K
Sbjct: 158 EAVERVLHK 166
>gi|328723854|ref|XP_001948745.2| PREDICTED: TAR DNA-binding protein 43-like isoform 1 [Acyrthosiphon
pisum]
Length = 377
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 327 EDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLV 382
+D+ YFS +G V +V +P R F FVTF+ PE + G H V D V V
Sbjct: 191 DDIREYFSKFGEVINVFVPKNPFRGFAFVTFLDPEVAASLC--GEDHIVKDVSVRV 244
>gi|307006509|gb|ADN23539.1| RNA-binding protein musashi subunit HRP1 [Hyalomma marginatum
rufipes]
Length = 208
Score = 39.3 bits (90), Expect = 6.0, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 321 DSTFREEDVSNYFSIYGPVHDVRIPY----QQKRMFGFVTFVYPETVKLI 366
+S E D+ YF +GPV +V +P+ Q+R F FVTF ++V+L+
Sbjct: 4 ESDMPEADIKAYFEKFGPVENVELPFDKARNQRRQFTFVTFEREDSVELV 53
>gi|224031575|gb|ACN34863.1| unknown [Zea mays]
Length = 240
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 323 TFREEDVSNYFSIYGPVHDVRIPY----QQKRMFGFVTFVYPE 361
T R ED+ F +GP+ DV +P ++ R FGFV F YPE
Sbjct: 67 TARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPE 109
>gi|410903804|ref|XP_003965383.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like isoform
1 [Takifugu rubripes]
Length = 314
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 326 EEDVSNYFSIYGPVHDVRIPYQQK----RMFGFVTFVYPETVKLILAKGNPHFVCDSRVL 381
EE V YF +G V + +P + K R F F+TF E VK I+ K H + S+
Sbjct: 154 EEKVREYFGAFGEVESIELPMETKTNKRRGFCFITFKEEEPVKCIMEK-KFHNIGLSKCE 212
Query: 382 VKPYKEKGKVQEKKQQQHQQQMERGEYSSACSSPSGP 418
+K V +++ QQ Q RG YSS GP
Sbjct: 213 IKV-----AVSKEQYQQQQYWGGRGGYSSRARGRGGP 244
>gi|428671713|gb|EKX72628.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 399
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 326 EEDVSNYFSIYGPVHDVRIPYQQ-----KRMFGFVTFVYPETVKLILAKGNPHFVCDSRV 380
E+D+ YFS +G VHD P QQ + FGF++F E ++ + + PH + V
Sbjct: 135 EDDLEEYFSKFGTVHDAYCPRQQNNSNLNKGFGFISFDNEEAIQKVF-ETVPHIIMGREV 193
Query: 381 LV 382
+V
Sbjct: 194 IV 195
>gi|209156106|gb|ACI34285.1| DAZ-associated protein 1 [Salmo salar]
Length = 436
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 321 DSTFREEDVSNYFSIYGPVHDVRI----PYQQKRMFGFVTFVYPETVKLILAKGNPHFVC 376
D + +E + NYFS YG V D I Q R FGFV F P V+ +L PH +
Sbjct: 19 DWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET-KPHNLD 77
Query: 377 DSRVLVKPYKEKGKVQEK 394
+ KP +G EK
Sbjct: 78 GRNIDPKPCTPRGMQPEK 95
>gi|448878234|gb|AGE46080.1| arginine/serine-rich splicing factor SCL28 transcript III [Zea
mays]
Length = 232
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 323 TFREEDVSNYFSIYGPVHDVRIPY----QQKRMFGFVTFVYPE 361
T R ED+ F +GP+ DV +P ++ R FGFV F YPE
Sbjct: 67 TARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPE 109
>gi|171451948|dbj|BAG15902.1| musashi [Dugesia japonica]
Length = 327
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 327 EDVSNYFSIYGPVHDVRI---PYQQK-RMFGFVTFVYPETVKLILAKGNPHFVCDSRV 380
E + NYF YG + DV I P ++ R FGFVTF+ T++ IL +PHF+ ++
Sbjct: 31 ETLRNYFQNYGDIKDVMILKDPVTKRSRGFGFVTFIEYSTIEKILL-NSPHFLDSKKI 87
>gi|189235137|ref|XP_001807432.1| PREDICTED: similar to RBD protein [Tribolium castaneum]
gi|270003801|gb|EFA00249.1| hypothetical protein TcasGA2_TC003078 [Tribolium castaneum]
Length = 840
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 323 TFREEDVSNYFSIYGPVHDVRIPY----QQKRMFGFVTFVYPE 361
T E+DV N FS +GP+ +V +P ++ + FG VTFV PE
Sbjct: 339 TTTEDDVENLFSKFGPLAEVNLPVDPTSKKIKGFGTVTFVMPE 381
>gi|357129786|ref|XP_003566542.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
isoform 2 [Brachypodium distachyon]
Length = 472
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 191 GWKHCLYFAK-GFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASV 249
G K C Y+ K G CK G+ CKFHH PE + +S L AS
Sbjct: 152 GEKECSYYIKTGHCKFGSTCKFHHPDGPELGVVSETPSMYPPAQPLPMSSPLTYPPLASW 211
Query: 250 Q--QRKLAAASQFMGSFP 265
Q + + S + GS+P
Sbjct: 212 QLGRPSVLPGSFYQGSYP 229
>gi|357129784|ref|XP_003566541.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
isoform 1 [Brachypodium distachyon]
Length = 472
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 191 GWKHCLYFAK-GFCKNGTACKFHHIHSPEAATAAAIVGSPSKLSEFELSQELLLRSKASV 249
G K C Y+ K G CK G+ CKFHH PE + +S L AS
Sbjct: 152 GEKECSYYIKTGHCKFGSTCKFHHPDGPELGVVSETPSMYPPAQPLPMSSPLTYPPLASW 211
Query: 250 Q--QRKLAAASQFMGSFP 265
Q + + S + GS+P
Sbjct: 212 QLGRPSVLPGSFYQGSYP 229
>gi|47217429|emb|CAG00789.1| unnamed protein product [Tetraodon nigroviridis]
Length = 476
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 321 DSTFREEDVSNYFSIYGPVHDVRI----PYQQKRMFGFVTFVYPETVKLILAKGNPHFVC 376
D + +E + NYFS YG V D I Q R FGFV F P V+ +L PH +
Sbjct: 8 DWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET-KPHNLD 66
Query: 377 DSRVLVKPYKEKGKVQEK 394
+ KP +G EK
Sbjct: 67 GRNIDPKPCTPRGMQPEK 84
>gi|328783809|ref|XP_392590.4| PREDICTED: TAR DNA-binding protein 43-like [Apis mellifera]
gi|340729558|ref|XP_003403067.1| PREDICTED: TAR DNA-binding protein 43-like [Bombus terrestris]
gi|350411720|ref|XP_003489432.1| PREDICTED: TAR DNA-binding protein 43-like isoform 1 [Bombus
impatiens]
gi|350411723|ref|XP_003489433.1| PREDICTED: TAR DNA-binding protein 43-like isoform 2 [Bombus
impatiens]
gi|380018789|ref|XP_003693304.1| PREDICTED: TAR DNA-binding protein 43-like [Apis florea]
gi|383859208|ref|XP_003705088.1| PREDICTED: TAR DNA-binding protein 43-like [Megachile rotundata]
Length = 467
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 327 EDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFV 375
+D+ +YFS YG V DV IP + R F FVTF+ PE + + G H +
Sbjct: 206 DDLRDYFSKYGEVTDVFIP-KPFRAFSFVTFLDPEVAQSLC--GEDHII 251
>gi|8671754|gb|AAF78364.1|AF181719_1 DAZ associated protein 1 [Homo sapiens]
Length = 407
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 321 DSTFREEDVSNYFSIYGPVHDVRI----PYQQKRMFGFVTFVYPETVKLILAKGNPHFVC 376
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 377 DSRVLVKPYKEKGKVQEK-KQQQHQQQMERGEYSSA 411
+ KP +G E+ + ++ Q+ R +YS +
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDYSKS 112
>gi|432854564|ref|XP_004067963.1| PREDICTED: DAZ-associated protein 1-like isoform 2 [Oryzias
latipes]
Length = 435
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 321 DSTFREEDVSNYFSIYGPVHDVRI----PYQQKRMFGFVTFVYPETVKLILAKGNPHFVC 376
D + +E + NYFS YG V D I Q R FGFV F P V+ +L PH +
Sbjct: 19 DWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET-KPHNLD 77
Query: 377 DSRVLVKPYKEKGKVQEK 394
+ KP +G EK
Sbjct: 78 GRNIDPKPCTPRGMQPEK 95
>gi|427797245|gb|JAA64074.1| Putative tar dna-binding protein 43, partial [Rhipicephalus
pulchellus]
Length = 517
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 327 EDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAK 369
+D+ +YFS YG V DV IP + R F FVTFV P+ + + +
Sbjct: 239 DDLRDYFSKYGEVTDVFIP-KPFRAFAFVTFVDPDVAQSLCGE 280
>gi|220983412|dbj|BAH11181.1| hypothetical protein (chloroplast) [Welwitschia mirabilis]
Length = 2575
Score = 38.9 bits (89), Expect = 9.3, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 417 GPFDFHFGGRMLYNNQEMLRRKLEEQADLQQAIEMQGRRLMNLQLHLKNNHLNHQFHHGL 476
G DFHF +L NN E L + D + +E L L+LH N+ L F+
Sbjct: 1883 GILDFHF---VLDNNNEKEEDNLVAEQDNLENLE----NLEKLKLH--NDFLESCFYSS- 1932
Query: 477 SNGSP---------IPSPTLSHSPNNRTRIFPFEGSDEEVPPEESGVSPVTDSQITDHLF 527
GSP IP + SP++ E D E+P E S + DS+I D
Sbjct: 1933 QLGSPKSYEIPDSEIPDYEIPDSPDS-------EIPDSEIPDSEIPDSEIPDSEIPDSPD 1985
Query: 528 HREENRTSNHNKNNNSDGNDKE----EKPNSDENDLCDSLEHILPDN 570
+ + + ++ +S+ D E E+P+S ++++ DS PD+
Sbjct: 1986 YEIPDSETPDSEIPDSETPDSEIPDSERPDSPDSEIPDSERPDSPDS 2032
>gi|209882542|ref|XP_002142707.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209558313|gb|EEA08358.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 337
Score = 38.9 bits (89), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 182 SDDDPNSGLGWKHCLYFAKGFCKNGTACKFHHIHSP 217
+D +P + L CLYFA+G C NG +CK++H H P
Sbjct: 78 ADTEPGNNLP-SFCLYFARGCCTNGASCKYYH-HLP 111
>gi|449447863|ref|XP_004141686.1| PREDICTED: uncharacterized protein LOC101220676 [Cucumis sativus]
gi|449525968|ref|XP_004169988.1| PREDICTED: uncharacterized LOC101220676 [Cucumis sativus]
Length = 700
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 17/144 (11%)
Query: 294 TCSRPERNDFFGSMNPSARQIYLT-FPADSTFREEDVSNYFSIYGPV--HDVRIPYQQKR 350
T R + ND M ++I++ P T EE+ +YFS +G + H + I Y+ KR
Sbjct: 497 TVPRADMND---KMVSRTKKIFVGGIPPGLT--EEEFKDYFSSFGRIIEHQIMIDYKTKR 551
Query: 351 M--FGFVTFVYPETVKLILAKGNPHFVCDSRVLVK---PYKEKGKVQEKKQQQHQQQMER 405
FGF+TF ++V+ I + H + +V +K P + Q M R
Sbjct: 552 SRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQTSGYDMYR 611
Query: 406 --GEYSSACSSPSGPFDFH--FGG 425
G Y + GP+D + +GG
Sbjct: 612 CGGLYDDIIGTDFGPYDLYAPYGG 635
>gi|410921768|ref|XP_003974355.1| PREDICTED: DAZ-associated protein 1-like [Takifugu rubripes]
Length = 435
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 321 DSTFREEDVSNYFSIYGPVHDVRI----PYQQKRMFGFVTFVYPETVKLILAKGNPHFVC 376
D + +E + NYFS YG V D I Q R FGFV F P V+ +L PH +
Sbjct: 19 DWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET-KPHNLD 77
Query: 377 DSRVLVKPYKEKGKVQEK 394
+ KP +G EK
Sbjct: 78 GRNIDPKPCTPRGMQPEK 95
>gi|432854562|ref|XP_004067962.1| PREDICTED: DAZ-associated protein 1-like isoform 1 [Oryzias
latipes]
Length = 404
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 321 DSTFREEDVSNYFSIYGPVHDVRI----PYQQKRMFGFVTFVYPETVKLILAKGNPHFVC 376
D + +E + NYFS YG V D I Q R FGFV F P V+ +L + PH +
Sbjct: 19 DWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVL-ETKPHNLD 77
Query: 377 DSRVLVKPYKEKGKVQEK 394
+ KP +G EK
Sbjct: 78 GRNIDPKPCTPRGMQPEK 95
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.128 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,265,937,582
Number of Sequences: 23463169
Number of extensions: 446870391
Number of successful extensions: 2120482
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 1415
Number of HSP's that attempted gapping in prelim test: 2056300
Number of HSP's gapped (non-prelim): 50554
length of query: 639
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 490
effective length of database: 8,863,183,186
effective search space: 4342959761140
effective search space used: 4342959761140
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 80 (35.4 bits)