BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041398
(196 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1QKI|A Chain A, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|B Chain B, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|C Chain C, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|D Chain D, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|E Chain E, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|F Chain F, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|G Chain G, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|H Chain H, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
Length = 514
Score = 191 bits (485), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 130/200 (65%), Gaps = 11/200 (5%)
Query: 4 GWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFE 63
GWNRII+EKPFG D S L+ + S F+E Q+YRIDH LG+ +++NL VLRF+N IF
Sbjct: 162 GWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFG 221
Query: 64 PLWSRTYIRSIQVILSEEMGVQS-GRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGE 122
P+W+R I + + E G + G YFD +GIIRD++ +H+LQ + L+AME P S N +
Sbjct: 222 PIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKPASTNSD 281
Query: 123 DIRNEKVKVLRSIRRLEPGNVILGQY--------KATSG--DKVDVKLNSLTPTYFAAAL 172
D+R+EKVKVL+ I ++ NV+LGQY +AT G D V S T T+ A L
Sbjct: 282 DVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVL 341
Query: 173 YIDNASWDGVPFLIKAGIGL 192
Y++N WDGVPF+++ G L
Sbjct: 342 YVENERWDGVPFILRCGKAL 361
>pdb|2BH9|A Chain A, X-Ray Structure Of A Deletion Variant Of Human Glucose 6-
Phosphate Dehydrogenase Complexed With Structural And
Coenzyme Nadp
pdb|2BHL|A Chain A, X-Ray Structure Of Human Glucose-6-Phosphate Dehydrogenase
(Deletion Variant) Complexed With Glucose-6-Phosphate
pdb|2BHL|B Chain B, X-Ray Structure Of Human Glucose-6-Phosphate Dehydrogenase
(Deletion Variant) Complexed With Glucose-6-Phosphate
Length = 489
Score = 191 bits (484), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 130/200 (65%), Gaps = 11/200 (5%)
Query: 4 GWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFE 63
GWNRII+EKPFG D S L+ + S F+E Q+YRIDH LG+ +++NL VLRF+N IF
Sbjct: 137 GWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFG 196
Query: 64 PLWSRTYIRSIQVILSEEMGVQS-GRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGE 122
P+W+R I + + E G + G YFD +GIIRD++ +H+LQ + L+AME P S N +
Sbjct: 197 PIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKPASTNSD 256
Query: 123 DIRNEKVKVLRSIRRLEPGNVILGQY--------KATSG--DKVDVKLNSLTPTYFAAAL 172
D+R+EKVKVL+ I ++ NV+LGQY +AT G D V S T T+ A L
Sbjct: 257 DVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVL 316
Query: 173 YIDNASWDGVPFLIKAGIGL 192
Y++N WDGVPF+++ G L
Sbjct: 317 YVENERWDGVPFILRCGKAL 336
>pdb|4E9I|A Chain A, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|B Chain B, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|C Chain C, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|D Chain D, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4EM5|A Chain A, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|B Chain B, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|C Chain C, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|D Chain D, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
Length = 541
Score = 175 bits (444), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 121/197 (61%), Gaps = 8/197 (4%)
Query: 4 GWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFE 63
GW R+I+EKPFG D S L+ L F E+Q++RIDH LG+ +++N+ V RF+N +F
Sbjct: 195 GWVRLIVEKPFGRDTETSEQLSNQLKPLFNERQVFRIDHYLGKEMVQNIIVTRFANRVFS 254
Query: 64 PLWSRTYIRSIQVILSEEMGVQS-GRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGE 122
LW+ I +Q+ E++G G YFD GIIRD++ +H+ Q ++LL ME P SL+ E
Sbjct: 255 ALWNSNSIACVQITFKEKIGTAGRGGYFDSIGIIRDVIQNHLTQILSLLTMEKPRSLSAE 314
Query: 123 DIRNEKVKVLRSIRRLEPGNVILGQYKATSG-------DKVDVKLNSLTPTYFAAALYID 175
DIR+EKV+VLR + P +LGQY A++ D V S PT+ L+++
Sbjct: 315 DIRDEKVQVLRQVVPANPAECVLGQYTASADGSTPGYLDDPSVPKGSHCPTFAVLRLHVN 374
Query: 176 NASWDGVPFLIKAGIGL 192
N W GVPF+I+AG L
Sbjct: 375 NDRWHGVPFIIRAGKAL 391
>pdb|1DPG|A Chain A, Glucose 6-Phosphate Dehydrogenase From Leuconostoc
Mesenteroides
pdb|1DPG|B Chain B, Glucose 6-Phosphate Dehydrogenase From Leuconostoc
Mesenteroides
Length = 485
Score = 140 bits (352), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 112/198 (56%), Gaps = 12/198 (6%)
Query: 4 GWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFE 63
G+NR++IEKPFG + L L + F + QL+RIDH LG+ +++N+ LRF N IF+
Sbjct: 140 GYNRLMIEKPFGTSYDTAAELQNDLENAFDDNQLFRIDHYLGKEMVQNIAALRFGNPIFD 199
Query: 64 PLWSRTYIRSIQVILSEEMGVQS-GRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGE 122
W++ YI+++QV LSE +GV+ Y+D G + D++ +H +Q + LAME P S +
Sbjct: 200 AAWNKDYIKNVQVTLSEVLGVEERAGYYDTAGALLDMIQNHTMQIVGWLAMEKPESFTDK 259
Query: 123 DIRNEKVKVLRSIRRLEPGNV----ILGQYKATSG-------DKVDVKLNSLTPTYFAAA 171
DIR K +++ + V + QY A +++DV +S T+ A
Sbjct: 260 DIRAAKNAAFNALKIYDEAEVNKYFVRAQYGAGDSADFKPYLEELDVPADSKNNTFIAGE 319
Query: 172 LYIDNASWDGVPFLIKAG 189
L D W+GVPF +++G
Sbjct: 320 LQFDLPRWEGVPFYVRSG 337
>pdb|1E77|A Chain A, Complex Of Active Mutant (Q365->c) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides With
Substrate
pdb|1H9A|A Chain A, Complex Of Active Mutant (Q365->c) Of Glucose 6-Phosphate
Dehydrogenase From L. Mesenteroides With Coenzyme Nadp
pdb|1H9B|A Chain A, Active Mutant (Q365->c) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides
Length = 485
Score = 140 bits (352), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 112/198 (56%), Gaps = 12/198 (6%)
Query: 4 GWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFE 63
G+NR++IEKPFG + L L + F + QL+RIDH LG+ +++N+ LRF N IF+
Sbjct: 140 GYNRLMIEKPFGTSYDTAAELQNDLENAFDDNQLFRIDHYLGKEMVQNIAALRFGNPIFD 199
Query: 64 PLWSRTYIRSIQVILSEEMGVQS-GRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGE 122
W++ YI+++QV LSE +GV+ Y+D G + D++ +H +Q + LAME P S +
Sbjct: 200 AAWNKDYIKNVQVTLSEVLGVEERAGYYDTAGALLDMIQNHTMQIVGWLAMEKPESFTDK 259
Query: 123 DIRNEKVKVLRSIRRLEPGNV----ILGQYKATSG-------DKVDVKLNSLTPTYFAAA 171
DIR K +++ + V + QY A +++DV +S T+ A
Sbjct: 260 DIRAAKNAAFNALKIYDEAEVNKYFVRAQYGAGDSADFKPYLEELDVPADSKNNTFIAGE 319
Query: 172 LYIDNASWDGVPFLIKAG 189
L D W+GVPF +++G
Sbjct: 320 LQFDLPRWEGVPFYVRSG 337
>pdb|1H93|A Chain A, Active Mutant (S215->c) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides
pdb|1H94|A Chain A, Complex Of Active Mutant (S215->c) Of Glucose 6-Phosphate
Dehydrogenase From L.Mesenteroides With Coenzyme Nad
Length = 485
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 111/198 (56%), Gaps = 12/198 (6%)
Query: 4 GWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFE 63
G+NR++IEKPFG + L L + F + QL+RIDH LG+ +++N+ LRF N IF+
Sbjct: 140 GYNRLMIEKPFGTSYDTAAELQNDLENAFDDNQLFRIDHYLGKEMVQNIAALRFGNPIFD 199
Query: 64 PLWSRTYIRSIQVILSEEMGVQS-GRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGE 122
W++ YI+++QV L E +GV+ Y+D G + D++ +H +Q + LAME P S +
Sbjct: 200 AAWNKDYIKNVQVTLCEVLGVEERAGYYDTAGALLDMIQNHTMQIVGWLAMEKPESFTDK 259
Query: 123 DIRNEKVKVLRSIRRLEPGNV----ILGQYKATSG-------DKVDVKLNSLTPTYFAAA 171
DIR K +++ + V + QY A +++DV +S T+ A
Sbjct: 260 DIRAAKNAAFNALKIYDEAEVNKYFVRAQYGAGDSADFKPYLEELDVPADSKNNTFIAGE 319
Query: 172 LYIDNASWDGVPFLIKAG 189
L D W+GVPF +++G
Sbjct: 320 LQFDLPRWEGVPFYVRSG 337
>pdb|1E7M|A Chain A, Active Site Mutant (D177->n) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides
pdb|1E7Y|A Chain A, Active Site Mutant (D177->n) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides Complexed
With Substrate And Nadph
Length = 485
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 112/198 (56%), Gaps = 12/198 (6%)
Query: 4 GWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFE 63
G+NR++IEKPFG + L L + F + QL+RI+H LG+ +++N+ LRF N IF+
Sbjct: 140 GYNRLMIEKPFGTSYDTAAELQNDLENAFDDNQLFRINHYLGKEMVQNIAALRFGNPIFD 199
Query: 64 PLWSRTYIRSIQVILSEEMGVQS-GRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGE 122
W++ YI+++QV LSE +GV+ Y+D G + D++ +H +Q + LAME P S +
Sbjct: 200 AAWNKDYIKNVQVTLSEVLGVEERAGYYDTAGALLDMIQNHTMQIVGWLAMEKPESFTDK 259
Query: 123 DIRNEKVKVLRSIRRLEPGNV----ILGQYKATSG-------DKVDVKLNSLTPTYFAAA 171
DIR K +++ + V + QY A +++DV +S T+ A
Sbjct: 260 DIRAAKNAAFNALKIYDEAEVNKYFVRAQYGAGDSADFKPYLEELDVPADSKNNTFIAGE 319
Query: 172 LYIDNASWDGVPFLIKAG 189
L D W+GVPF +++G
Sbjct: 320 LQFDLPRWEGVPFYVRSG 337
>pdb|2DPG|A Chain A, Complex Of Inactive Mutant (H240->n) Of Glucose
6-Phosphate Dehydrogenase From Leuconostoc Mesenteroides
With Nadp+
Length = 485
Score = 137 bits (345), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 112/198 (56%), Gaps = 12/198 (6%)
Query: 4 GWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFE 63
G+NR++IEKPFG + L L + F + QL+RIDH LG+ +++N+ LRF N IF+
Sbjct: 140 GYNRLMIEKPFGTSYDTAAELQNDLENAFDDNQLFRIDHYLGKEMVQNIAALRFGNPIFD 199
Query: 64 PLWSRTYIRSIQVILSEEMGVQS-GRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGE 122
W++ YI+++QV LSE +GV+ Y+D G + D++ ++ +Q + LAME P S +
Sbjct: 200 AAWNKDYIKNVQVTLSEVLGVEERAGYYDTAGALLDMIQNNTMQIVGWLAMEKPESFTDK 259
Query: 123 DIRNEKVKVLRSIRRLEPGNV----ILGQYKATSG-------DKVDVKLNSLTPTYFAAA 171
DIR K +++ + V + QY A +++DV +S T+ A
Sbjct: 260 DIRAAKNAAFNALKIYDEAEVNKYFVRAQYGAGDSADFKPYLEELDVPADSKNNTFIAGE 319
Query: 172 LYIDNASWDGVPFLIKAG 189
L D W+GVPF +++G
Sbjct: 320 LQFDLPRWEGVPFYVRSG 337
>pdb|1GPE|A Chain A, Glucose Oxidase From Penicillium Amagasakiense
pdb|1GPE|B Chain B, Glucose Oxidase From Penicillium Amagasakiense
Length = 587
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 18/105 (17%)
Query: 24 LTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLI---FEPLWSRTYIRSIQVILSE 80
L + L S+ K+ + + L G NL++N T+ ++S+ + F P W + S ++S
Sbjct: 474 LARDLTSQGAMKEYFAGETLPGYNLVQNATLSQWSDYVLQNFRPNW---HAVSSCSMMSR 530
Query: 81 EM-----------GVQSGRYFDGYGIIRDIVHSHILQTIALLAME 114
E+ G Q R DG I V SH++ +A++
Sbjct: 531 ELGGVVDATAKVYGTQGLRVIDG-SIPPTQVSSHVMTIFYGMALK 574
>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
pdb|2VN8|B Chain B, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
Length = 375
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 63/147 (42%), Gaps = 28/147 (19%)
Query: 54 VLRFSNLIFEPLWS-------RTYIRSIQVILSEEMGVQSGRYFDGYGIIRDIVHSHILQ 106
VLRF+ + P+ + + S+ I ++ ++SG + RD +H
Sbjct: 35 VLRFTQNMMMPIIHYPNEVIVKVHAASVNPI---DVNMRSGYGATALNMKRDPLH----- 86
Query: 107 TIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVI-----------LGQYKATSGDK 155
+ + E P++L G D+ ++ ++ +PG+ + L ++ SG++
Sbjct: 87 -VKIKGEEFPLTL-GRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNE 144
Query: 156 VDVKLNSLTPTYFAAALYIDNASWDGV 182
V K SLT T A+ Y+ +W +
Sbjct: 145 VSHKPKSLTHTQAASLPYVALTAWSAI 171
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 91 DGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQYKA 150
D G+ ++ +++ +A + +G + +++K+L++I + E G+V+LG Y+
Sbjct: 159 DADGLCTRLIKPKVME--GTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYR- 215
Query: 151 TSGDKVDVKL--NSLTPTYFAA 170
G+KV VK N T F A
Sbjct: 216 --GNKVAVKCIKNDATAQAFLA 235
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 27.3 bits (59), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 120 NGEDIRNEKVKVLRSIRRLEPGNVILGQYKATSGDKVDVKL--NSLTPTYFAA 170
+G + +++K+L++I + E G+V+LG Y+ G+KV VK N T F A
Sbjct: 5 SGWALNMKELKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKNDATAQAFLA 54
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 27.3 bits (59), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 120 NGEDIRNEKVKVLRSIRRLEPGNVILGQYKATSGDKVDVKL--NSLTPTYFAA 170
+G + +++K+L++I + E G+V+LG Y+ G+KV VK N T F A
Sbjct: 14 SGWALNMKELKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKNDATAQAFLA 63
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Query: 127 EKVKVLRSIRRLEPGNVILGQYKATSGDKVDVKL--NSLTPTYFAA 170
+++K+L++I + E G+V+LG Y+ G+KV VK N T F A
Sbjct: 6 KELKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKNDATAQAFLA 48
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.142 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,932,590
Number of Sequences: 62578
Number of extensions: 228159
Number of successful extensions: 499
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 474
Number of HSP's gapped (non-prelim): 15
length of query: 196
length of database: 14,973,337
effective HSP length: 94
effective length of query: 102
effective length of database: 9,091,005
effective search space: 927282510
effective search space used: 927282510
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 49 (23.5 bits)