Query 041398
Match_columns 196
No_of_seqs 122 out of 1066
Neff 4.5
Searched_HMMs 46136
Date Fri Mar 29 06:40:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041398.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041398hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00309 glucose-6-phosphate 1 100.0 6E-100 1E-104 718.7 18.0 194 3-196 192-393 (542)
2 PLN02333 glucose-6-phosphate 1 100.0 9E-100 2E-104 723.0 18.4 194 3-196 252-455 (604)
3 PLN02539 glucose-6-phosphate 1 100.0 9E-100 2E-104 711.1 17.6 190 5-195 158-348 (491)
4 PLN02640 glucose-6-phosphate 1 100.0 1.6E-99 3E-104 718.3 18.5 194 3-196 223-426 (573)
5 PRK05722 glucose-6-phosphate 1 100.0 1.4E-99 3E-104 710.4 17.9 194 3-196 146-353 (495)
6 PRK12854 glucose-6-phosphate 1 100.0 2.3E-99 5E-104 707.4 17.4 190 5-195 146-336 (484)
7 TIGR00871 zwf glucose-6-phosph 100.0 1.3E-98 3E-103 702.2 18.4 194 3-196 137-342 (482)
8 PRK12853 glucose-6-phosphate 1 100.0 1.4E-98 3E-103 701.9 18.5 194 3-196 136-341 (482)
9 COG0364 Zwf Glucose-6-phosphat 100.0 1.5E-98 3E-103 698.2 18.1 191 6-196 139-343 (483)
10 KOG0563 Glucose-6-phosphate 1- 100.0 3E-92 6.4E-97 652.6 17.0 194 3-196 153-354 (499)
11 PF02781 G6PD_C: Glucose-6-pho 100.0 1.3E-72 2.7E-77 499.8 8.6 143 53-195 1-153 (293)
12 PF14251 DUF4346: Domain of un 92.4 0.11 2.4E-06 41.6 2.7 40 19-58 72-113 (119)
13 COG0673 MviM Predicted dehydro 77.9 15 0.00033 31.7 8.3 105 6-121 92-204 (342)
14 PRK14634 hypothetical protein; 75.0 3.7 8.1E-05 33.7 3.5 37 6-43 38-76 (155)
15 PRK14646 hypothetical protein; 68.3 6.8 0.00015 32.2 3.6 39 4-43 35-76 (155)
16 PRK11579 putative oxidoreducta 67.0 5.7 0.00012 35.4 3.1 25 6-30 89-113 (346)
17 PRK10206 putative oxidoreducta 64.1 6.8 0.00015 35.3 3.1 25 6-30 89-113 (344)
18 PRK14638 hypothetical protein; 63.4 9.5 0.00021 31.2 3.5 33 6-38 39-72 (150)
19 PRK14632 hypothetical protein; 62.2 10 0.00022 31.7 3.6 33 6-38 38-70 (172)
20 COG0779 Uncharacterized protei 61.6 11 0.00024 31.2 3.7 31 6-36 39-69 (153)
21 PRK14647 hypothetical protein; 55.9 15 0.00032 30.2 3.5 33 6-38 39-71 (159)
22 PRK14633 hypothetical protein; 54.4 17 0.00038 29.6 3.6 34 5-38 33-66 (150)
23 PRK14639 hypothetical protein; 52.5 19 0.00042 29.1 3.6 33 6-38 28-60 (140)
24 PRK14640 hypothetical protein; 48.0 25 0.00054 28.7 3.6 33 6-38 37-69 (152)
25 PRK14636 hypothetical protein; 47.8 25 0.00053 29.6 3.6 33 6-38 36-70 (176)
26 PRK00092 ribosome maturation p 44.7 30 0.00066 28.0 3.6 33 6-38 38-70 (154)
27 PRK02001 hypothetical protein; 44.6 29 0.00063 28.6 3.5 32 5-36 32-63 (152)
28 KOG0946 ER-Golgi vesicle-tethe 42.9 13 0.00029 38.5 1.5 117 21-150 233-351 (970)
29 PRK14641 hypothetical protein; 40.3 35 0.00077 28.7 3.5 32 6-37 40-71 (173)
30 PRK14644 hypothetical protein; 38.5 38 0.00083 27.3 3.3 31 6-39 29-59 (136)
31 PF10375 GRAB: GRIP-related Ar 35.3 21 0.00045 20.1 0.9 14 95-108 6-19 (19)
32 PRK14631 hypothetical protein; 33.8 55 0.0012 27.5 3.6 33 6-38 39-89 (174)
33 PF11714 Inhibitor_I53: Thromb 32.6 84 0.0018 23.4 3.9 30 104-133 9-38 (78)
34 PRK14635 hypothetical protein; 32.0 62 0.0013 26.7 3.6 36 6-43 36-75 (162)
35 KOG3997 Major apurinic/apyrimi 30.6 15 0.00033 33.0 -0.2 111 70-189 136-263 (281)
36 PF02446 Glyco_hydro_77: 4-alp 29.6 24 0.00051 33.9 0.8 25 22-46 266-290 (496)
37 TIGR01761 thiaz-red thiazoliny 27.8 56 0.0012 30.1 2.9 34 6-44 91-124 (343)
38 PRK14645 hypothetical protein; 27.5 83 0.0018 25.9 3.6 33 6-38 40-74 (154)
39 COG4785 NlpI Lipoprotein NlpI, 27.3 32 0.00069 31.2 1.2 55 85-141 70-131 (297)
40 PRK14508 4-alpha-glucanotransf 27.3 23 0.0005 34.2 0.3 23 23-45 279-301 (497)
41 PRK13245 hetR heterocyst diffe 27.2 27 0.00058 31.5 0.7 22 166-189 191-212 (299)
42 TIGR00284 dihydropteroate synt 26.3 45 0.00098 32.5 2.1 37 19-58 452-490 (499)
43 PRK14642 hypothetical protein; 26.2 97 0.0021 26.8 3.9 34 4-37 27-73 (197)
44 KOG4128 Bleomycin hydrolases a 25.6 52 0.0011 31.4 2.3 27 95-122 209-235 (457)
45 PLN02635 disproportionating en 25.5 25 0.00055 34.5 0.3 25 22-46 304-328 (538)
46 PRK14637 hypothetical protein; 25.0 88 0.0019 25.6 3.3 29 6-34 39-67 (151)
47 PF08621 RPAP1_N: RPAP1-like, 24.4 55 0.0012 22.2 1.7 20 118-137 14-33 (49)
48 TIGR00156 conserved hypothetic 24.1 32 0.0007 27.7 0.6 16 169-184 83-98 (126)
49 PF02875 Mur_ligase_C: Mur lig 24.0 1E+02 0.0022 21.9 3.2 33 6-40 14-46 (91)
50 PF02576 DUF150: Uncharacteris 23.7 1.2E+02 0.0026 23.9 3.8 33 6-38 27-59 (141)
51 COG5649 Uncharacterized conser 23.1 28 0.00061 28.3 0.0 12 174-185 48-59 (132)
52 TIGR00217 malQ 4-alpha-glucano 23.1 30 0.00065 33.7 0.2 24 22-45 292-315 (513)
53 PF14291 DUF4371: Domain of un 22.7 1.2E+02 0.0027 25.8 3.9 112 19-147 94-221 (235)
54 PRK14630 hypothetical protein; 21.2 1.4E+02 0.003 24.2 3.7 29 6-34 39-67 (143)
55 PRK11052 malQ 4-alpha-glucanot 21.1 37 0.00079 34.4 0.4 22 24-45 433-454 (695)
56 PRK02963 carbon starvation ind 20.5 1.3E+02 0.0027 28.0 3.7 94 90-185 59-166 (316)
57 PLN02950 4-alpha-glucanotransf 20.2 42 0.00091 35.0 0.6 24 22-45 535-558 (909)
No 1
>PTZ00309 glucose-6-phosphate 1-dehydrogenase; Provisional
Probab=100.00 E-value=6e-100 Score=718.65 Aligned_cols=194 Identities=50% Similarity=0.882 Sum_probs=190.5
Q ss_pred CCceEEEeccCCCCChHHHHHHHHHHhccCCCcccccccccccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCC
Q 041398 3 KGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEM 82 (196)
Q Consensus 3 ~~~~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHYLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~ 82 (196)
+||+|||||||||+||+||++||++|+++|+|+||||||||||||||||||+|||+|++|+|+|||+||+|||||++|++
T Consensus 192 ~G~~RiViEKPFG~Dl~SA~~Ln~~l~~~f~E~qIyRIDHYLGKE~VQNil~lRFaN~ifeplWNr~~I~~VqIt~~E~~ 271 (542)
T PTZ00309 192 NGWVRVIVEKPFGRDLESSEELSNQLEPLFDESQLYRIDHYLGKEMVQNLIVLRFANRVFEPLWNRNNIACVQITFKEDI 271 (542)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHhhCCHhHccccCccccHHHHHHHHHHHHhhHhhhhhhcccccceeEEEEecCC
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ccc-ccccccccchhHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhhccccCCCCccccccCCC-------CCCC
Q 041398 83 GVQ-SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQYKA-------TSGD 154 (196)
Q Consensus 83 gv~-R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~~~ir~eKvkvL~~i~~~~~~~~v~GQY~~-------~~~~ 154 (196)
||| ||+|||++|||||||||||||||||+|||||.++++++||+||+|||||++|++++++|+|||.+ +|++
T Consensus 272 GvegRg~yYD~~GalRDmvQNHLlQlLalvAMEpP~~~~a~~irdeKvkVLrslrpi~~~~~VrGQY~~~~~~~v~gY~~ 351 (542)
T PTZ00309 272 GTEGRGGYFDSYGIIRDVMQNHLLQILALLAMEKPVSLSAEDIRDEKVKVLKCIEPIKMEECVLGQYTASADGSIPGYLE 351 (542)
T ss_pred CcChhhhhhhccchHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhCcCCCCccceEEecccCCCCCCCCCccc
Confidence 999 99999999999999999999999999999999999999999999999999999999999999975 5899
Q ss_pred CCCCCCCCcccceeeeeeeeeCCCcCCCceEEEcCCCCCCCC
Q 041398 155 KVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLIRHG 196 (196)
Q Consensus 155 e~~v~~~S~TeTfaa~~l~Idn~rW~gVPF~lrtGK~L~~~~ 196 (196)
|+||+|+|.||||||++|+||||||+||||||||||+|++|.
T Consensus 352 e~gV~~dS~TeTFaA~kl~IdN~RW~GVPFylRtGK~L~~r~ 393 (542)
T PTZ00309 352 DEGVPKDSTTPTFAAAVLHINNDRWEGVPFILEAGKALEERY 393 (542)
T ss_pred CCCCCCCCCccceeEEEEEecCcccCCceEEEEeccCcCCCe
Confidence 999999999999999999999999999999999999999873
No 2
>PLN02333 glucose-6-phosphate 1-dehydrogenase
Probab=100.00 E-value=8.7e-100 Score=722.99 Aligned_cols=194 Identities=60% Similarity=1.026 Sum_probs=190.4
Q ss_pred CCceEEEeccCCCCChHHHHHHHHHHhccCCCcccccccccccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCC
Q 041398 3 KGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEM 82 (196)
Q Consensus 3 ~~~~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHYLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~ 82 (196)
+||+|||||||||+||+||++||+.|+++|+|+||||||||||||+|||||+|||+|.+|+|+|||+||++||||++|++
T Consensus 252 ~gw~RIVvEKPFG~Dl~SA~~Ln~~L~~~f~E~QIyRIDHYLGKE~VQNll~lRFaN~ifeplWNr~~I~~VqIt~~E~~ 331 (604)
T PLN02333 252 NGWTRVIVEKPFGRDSESSAALTKSLKQYLEEDQIFRIDHYLGKELVENLSVLRFSNLIFEPLWSRQYIRNVQFIFSEDF 331 (604)
T ss_pred CCCeEEEEeCCCCCCHHHHHHHHHHHHhhCCHHHccccCccccHHHHHHHHHHHHhhHhhhhhhccccceeEEEEEecCC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ccc-ccccccccchhHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhhccccCCCCccccccCCC---------CC
Q 041398 83 GVQ-SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQYKA---------TS 152 (196)
Q Consensus 83 gv~-R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~~~ir~eKvkvL~~i~~~~~~~~v~GQY~~---------~~ 152 (196)
||| ||+|||++|||||||||||||||||+|||||.+++++|||+||+|||||++|++++++|+|||.+ +|
T Consensus 332 GvEgRggYYD~~GaiRDmvQNHLLQlLaLvAME~P~s~~aedIRdEKvKVLrsirpi~~~~vVrGQY~~g~~~g~~~~GY 411 (604)
T PLN02333 332 GTEGRGGYFDNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMRPIQLEDVVIGQYKSHTKGGVTYPAY 411 (604)
T ss_pred CcChhhhhhhccchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhccCCCCccceEEecccCCCcCCccCCCc
Confidence 999 99999999999999999999999999999999999999999999999999999999999999974 58
Q ss_pred CCCCCCCCCCcccceeeeeeeeeCCCcCCCceEEEcCCCCCCCC
Q 041398 153 GDKVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLIRHG 196 (196)
Q Consensus 153 ~~e~~v~~~S~TeTfaa~~l~Idn~rW~gVPF~lrtGK~L~~~~ 196 (196)
++|++|++||+||||||++|+||||||+||||||||||+|++|.
T Consensus 412 ~de~~V~~dS~TeTFaA~~l~IDN~RW~GVPF~LRtGK~L~~r~ 455 (604)
T PLN02333 412 TDDKTVPKGSLTPTFAAAALFIDNARWDGVPFLMKAGKALHTKS 455 (604)
T ss_pred ccCCCCCCCCCCcceeeEEEEEcCcccCCCCEEEEccCCCCcCc
Confidence 89999999999999999999999999999999999999999974
No 3
>PLN02539 glucose-6-phosphate 1-dehydrogenase
Probab=100.00 E-value=9e-100 Score=711.09 Aligned_cols=190 Identities=48% Similarity=0.871 Sum_probs=188.1
Q ss_pred ceEEEeccCCCCChHHHHHHHHHHhccCCCcccccccccccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 5 WNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 5 ~~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHYLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
|+|||||||||+||+||++||+.|+++|+|+||||||||||||+|||||+|||+|.+|+|+|||+||+|||||++|++||
T Consensus 158 ~~RiviEKPFG~Dl~SA~~Ln~~l~~~f~E~qIyRIDHYLGKe~VqNil~lRFaN~ifeplWNr~~I~~VqIt~~E~~Gv 237 (491)
T PLN02539 158 WTRIVVEKPFGKDLESAEELSSQIGELFDESQLYRIDHYLGKELVQNLLVLRFANRFFLPLWNRDNIANVQIVFREDFGT 237 (491)
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHHhhCCHHHeeccCccccHHHHHHHHHHHHhhHHHHhhhcccccceEEEEEecCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c-ccccccccchhHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhhccccCCCCccccccCCCCCCCCCCCCCCCc
Q 041398 85 Q-SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQYKATSGDKVDVKLNSL 163 (196)
Q Consensus 85 ~-R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~~~ir~eKvkvL~~i~~~~~~~~v~GQY~~~~~~e~~v~~~S~ 163 (196)
| ||+|||++|||||||||||||||||+|||||.++++++||+||+|||+|++|++++++|+|||. +|++|+||+|||+
T Consensus 238 egR~~yYD~~GalRDmvQNHLlQlLalvAMEpP~~~~~~~ir~eK~kVL~s~rp~~~~~~VrGQY~-gY~ee~gV~~dS~ 316 (491)
T PLN02539 238 EGRGGYFDEYGIIRDIIQNHLLQVLCLVAMEKPVSLKPEHIRDEKVKVLQSVEPIKDEEVVLGQYE-GYRDDPTVPDDSN 316 (491)
T ss_pred ChhhhhhhccchHHHHHHHHHHHHHHHHHhCCcCCCCHHHHHHHHHHHHhccCCCCccceeeecCc-cccccCCCCCCCC
Confidence 9 9999999999999999999999999999999999999999999999999999999999999996 5899999999999
Q ss_pred ccceeeeeeeeeCCCcCCCceEEEcCCCCCCC
Q 041398 164 TPTYFAAALYIDNASWDGVPFLIKAGIGLIRH 195 (196)
Q Consensus 164 TeTfaa~~l~Idn~rW~gVPF~lrtGK~L~~~ 195 (196)
||||||++|+||||||+||||||||||+|++|
T Consensus 317 TeTfaa~kl~Idn~RW~GVPFylrtGK~L~~~ 348 (491)
T PLN02539 317 TPTFASVVLRINNERWEGVPFILKAGKALDSR 348 (491)
T ss_pred cchheeEEEEecCcccCCCCEEEEccCCCCcC
Confidence 99999999999999999999999999999987
No 4
>PLN02640 glucose-6-phosphate 1-dehydrogenase
Probab=100.00 E-value=1.6e-99 Score=718.29 Aligned_cols=194 Identities=59% Similarity=1.014 Sum_probs=190.3
Q ss_pred CCceEEEeccCCCCChHHHHHHHHHHhccCCCcccccccccccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCC
Q 041398 3 KGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEM 82 (196)
Q Consensus 3 ~~~~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHYLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~ 82 (196)
+||+|||||||||+||+||++||+.|+++|+|+||||||||||||+|||||+|||+|.+|+|+|||+||++||||++|++
T Consensus 223 ~g~~RIVvEKPFG~DL~SA~~Ln~~L~~~f~EeQIyRIDHYLGKE~VQNil~lRFaN~ifeplWNr~~Id~VqIt~~E~~ 302 (573)
T PLN02640 223 NGWTRVIVEKPFGRDSESSGELTRCLKQYLTEEQIFRIDHYLGKELVENLSVLRFSNLVFEPLWSRNYIRNVQLIFSEDF 302 (573)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHhhCCHHHccCcCccccHHHHHHHHHHHHhhhhhhhhhcccccceEEEEEecCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ccc-ccccccccchhHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhhccccCCCCccccccCCC---------CC
Q 041398 83 GVQ-SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQYKA---------TS 152 (196)
Q Consensus 83 gv~-R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~~~ir~eKvkvL~~i~~~~~~~~v~GQY~~---------~~ 152 (196)
||| ||+|||++|||||||||||||||||||||||.++++++||+||+|||++++|++++++|+|||.+ +|
T Consensus 303 GVegR~~YYD~~GalRDMvQNHLlQlLaLvAMEpP~~~~a~~IRdEKvkVLrairp~~~~~~VrGQY~~g~~~g~~v~gY 382 (573)
T PLN02640 303 GTEGRGGYFDNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMKPLQLEDVIVGQYKGHSKGGKSYPAY 382 (573)
T ss_pred CcChhhhhhhccchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhccCCCChhceEEecccCCCCCCCcCCCc
Confidence 999 99999999999999999999999999999999999999999999999999999999999999975 48
Q ss_pred CCCCCCCCCCcccceeeeeeeeeCCCcCCCceEEEcCCCCCCCC
Q 041398 153 GDKVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLIRHG 196 (196)
Q Consensus 153 ~~e~~v~~~S~TeTfaa~~l~Idn~rW~gVPF~lrtGK~L~~~~ 196 (196)
++|+||+|||+||||||++++||||||+||||||||||+|++|.
T Consensus 383 ~eE~gV~~dS~TETFaA~kl~IDN~RW~GVPFyLRTGKrL~~r~ 426 (573)
T PLN02640 383 TDDPTVPKHSLTPTFAAAALFINNARWDGVPFLMKAGKALHTRR 426 (573)
T ss_pred ccCCCCCCCCCCcceeEEEEEEcCcccCCCCEEEEccCCCCcCe
Confidence 99999999999999999999999999999999999999999873
No 5
>PRK05722 glucose-6-phosphate 1-dehydrogenase; Validated
Probab=100.00 E-value=1.4e-99 Score=710.39 Aligned_cols=194 Identities=46% Similarity=0.850 Sum_probs=189.4
Q ss_pred CCceEEEeccCCCCChHHHHHHHHHHhccCCCcccccccccccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCC
Q 041398 3 KGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEM 82 (196)
Q Consensus 3 ~~~~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHYLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~ 82 (196)
+||+|||||||||+||+||++||+.|+++|+|+||||||||||||+|||||+|||+|.+|+|+|||+||+|||||++|++
T Consensus 146 ~g~~RIVIEKPFG~DL~SA~~Ln~~l~~~f~E~qIyRIDHyLGKe~VqNil~lRFaN~~feplWNr~~I~~VqIt~~E~~ 225 (495)
T PRK05722 146 GGWRRVVIEKPFGHDLASARELNDQVGEVFKEEQIYRIDHYLGKETVQNLLALRFANALFEPLWNRNYIDHVQITVAETV 225 (495)
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHHhcCCHhHeeccCccccHHHHHHHHHHHHhhHhhHhhhcccccceeEEEEecCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ccc-ccccccccchhHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhhccccCCCCc----cccccCCC-------
Q 041398 83 GVQ-SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGN----VILGQYKA------- 150 (196)
Q Consensus 83 gv~-R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~~~ir~eKvkvL~~i~~~~~~~----~v~GQY~~------- 150 (196)
||| ||+|||++|||||||||||||||||||||||.++++++||+||+|||+|++|+++++ +|+|||.+
T Consensus 226 GvegR~~yYd~~GalRDmvQNHLlQlLalvAME~P~~~~~~~ir~eK~kvL~sir~~~~~~~~~~~VrGQY~~g~~~g~~ 305 (495)
T PRK05722 226 GVEGRGGYYDKSGALRDMVQNHLLQLLALVAMEPPASLDADSIRDEKVKVLRALRPITPEDVKENTVRGQYTAGWIGGKP 305 (495)
T ss_pred CcChhhhhhhccchHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCCChhhhhcceeeccccCCCCCCCC
Confidence 999 999999999999999999999999999999999999999999999999999999976 89999973
Q ss_pred --CCCCCCCCCCCCcccceeeeeeeeeCCCcCCCceEEEcCCCCCCCC
Q 041398 151 --TSGDKVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLIRHG 196 (196)
Q Consensus 151 --~~~~e~~v~~~S~TeTfaa~~l~Idn~rW~gVPF~lrtGK~L~~~~ 196 (196)
+|++|+||+|+|+||||||++|+||||||+||||||||||+|++|.
T Consensus 306 ~~gY~~e~~V~~~S~TeTfaa~kl~Idn~RW~GVPF~lrtGK~L~~~~ 353 (495)
T PRK05722 306 VPGYREEEGVNPDSTTETFVALKLEIDNWRWAGVPFYLRTGKRLPKKV 353 (495)
T ss_pred CCCccCCCCCCCCCCCcceeEEEEEEcCCccCCceEEEEecCCCCCce
Confidence 5899999999999999999999999999999999999999999873
No 6
>PRK12854 glucose-6-phosphate 1-dehydrogenase; Provisional
Probab=100.00 E-value=2.3e-99 Score=707.42 Aligned_cols=190 Identities=39% Similarity=0.752 Sum_probs=187.7
Q ss_pred ceEEEeccCCCCChHHHHHHHHHHhccCCCcccccccccccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 5 WNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 5 ~~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHYLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
++|||||||||+||+||++||+.|+++|+|+||||||||||||+|||||+|||+|.+|+|+|||+||+|||||++|++||
T Consensus 146 ~~RiViEKPFG~Dl~SA~~Ln~~l~~~f~E~qIyRIDHYLGKe~VqNll~lRFaN~~feplWNr~~I~~VqIt~~E~~Gv 225 (484)
T PRK12854 146 GSRVVMEKPFGTDLASAEALNAAVHEVFDESQIFRIDHFLGKEAAQNILAFRFANGLFEPIWNREFIDHVQIDVPETLGV 225 (484)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhhCCHHHeeccCccccHHHHHHHHHHHHhHHHHHhhhcccccceeEEEEecCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c-ccccccccchhHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhhccccCCCCccccccCCCCCCCCCCCCCCCc
Q 041398 85 Q-SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQYKATSGDKVDVKLNSL 163 (196)
Q Consensus 85 ~-R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~~~ir~eKvkvL~~i~~~~~~~~v~GQY~~~~~~e~~v~~~S~ 163 (196)
| ||+|||++|||||||||||||||||+|||||.++++++||+||+|||||++|++++++|+|||. +|++|+||+|+|+
T Consensus 226 egR~~yYD~~GalRDmvQNHLlQlLalvAMEpP~~~~a~~ir~eK~kvLrslrp~~~~~~VrGQY~-gY~~e~gV~~~S~ 304 (484)
T PRK12854 226 DTRAAFYDATGAYRDMVVTHLFQVLAFVAMEPPTALEPDAISEEKNKVFRSMRPLDPAEVVRGQYS-GYRDEPGVAPDST 304 (484)
T ss_pred CchhhhhcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCcCCCccceEeeccc-ccccCCCCCCCCC
Confidence 9 9999999999999999999999999999999999999999999999999999999999999998 5899999999999
Q ss_pred ccceeeeeeeeeCCCcCCCceEEEcCCCCCCC
Q 041398 164 TPTYFAAALYIDNASWDGVPFLIKAGIGLIRH 195 (196)
Q Consensus 164 TeTfaa~~l~Idn~rW~gVPF~lrtGK~L~~~ 195 (196)
||||||++|+||||||+||||||||||+|++|
T Consensus 305 TeTfaa~kl~Idn~RW~GVPFylrtGK~L~~~ 336 (484)
T PRK12854 305 TETFVALKVWIDNWRWAGVPFYLRTGKRMAEG 336 (484)
T ss_pred CcceeEEEEEEcCCccCCceEEEEecCccCCc
Confidence 99999999999999999999999999999987
No 7
>TIGR00871 zwf glucose-6-phosphate 1-dehydrogenase. This is a well-studied enzyme family, with sequences available from well over 50 species. The trusted cutoff is set above the score for the Drosophila melanogaster CG7140 gene product, a homolog of unknown function. G6PD homologs from the bacteria Aquifex aeolicus and Helicobacter pylori lack several motifs well conserved most other members, were omitted from the seed alignment, and score well below the trusted cutoff.
Probab=100.00 E-value=1.3e-98 Score=702.21 Aligned_cols=194 Identities=47% Similarity=0.881 Sum_probs=189.2
Q ss_pred CCceEEEeccCCCCChHHHHHHHHHHhccCCCcccccccccccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCC
Q 041398 3 KGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEM 82 (196)
Q Consensus 3 ~~~~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHYLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~ 82 (196)
+||+|||||||||+||+||++||+.|+++|+|+|||||||||||||||||++|||+|++|+|+|||+||+|||||++|++
T Consensus 137 ~g~~RIVvEKPFG~DL~SA~~Ln~~l~~~f~E~qIyRIDHyLGKe~VqNil~lRFaN~~fe~lWNr~~I~~VqIt~~E~~ 216 (482)
T TIGR00871 137 QGWSRVVVEKPFGHDLASAQELNKQLRAVFKEDQIYRIDHYLGKETVQNLLVLRFANQIFEPLWNRRYIDHVQITFAESF 216 (482)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHhcCCHhHeeecccccchHHHHHHHHHHHhhHhhhhhhcccccceeEEEEecCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ccc-ccccccccchhHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhhccccCCCC--ccccccCCC---------
Q 041398 83 GVQ-SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPG--NVILGQYKA--------- 150 (196)
Q Consensus 83 gv~-R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~~~ir~eKvkvL~~i~~~~~~--~~v~GQY~~--------- 150 (196)
||| ||+|||++|||||||||||||||||||||||.++++++||+||+|||+|++|++++ ++|+|||.+
T Consensus 217 GvegR~~yyD~~GalRDmvQNHLlQlL~lvAMe~P~~~~a~~ir~eK~kVL~~~r~~~~~~~~~vrGQY~~g~~~g~~~~ 296 (482)
T TIGR00871 217 GVEGRGGYYDKSGALRDMVQNHLLQLLCLVAMEPPASFDADSIRDEKVKVLKALRPIDPDDNNVVRGQYGAGEIGGVSVP 296 (482)
T ss_pred CcChhhhhhhccchHHHHHHhHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCCCcccCceEeccccCCCCCCcCCC
Confidence 999 99999999999999999999999999999999999999999999999999999996 899999953
Q ss_pred CCCCCCCCCCCCcccceeeeeeeeeCCCcCCCceEEEcCCCCCCCC
Q 041398 151 TSGDKVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLIRHG 196 (196)
Q Consensus 151 ~~~~e~~v~~~S~TeTfaa~~l~Idn~rW~gVPF~lrtGK~L~~~~ 196 (196)
+|++|+||+++|+||||||++++||||||+||||||||||+|++|.
T Consensus 297 gY~~e~~V~~~S~TeTfaa~~l~Idn~RW~GVPF~lrtGK~L~~~~ 342 (482)
T TIGR00871 297 GYLEEEGVDKDSTTETFAALKLYIDNWRWAGVPFYLRTGKRLPEKV 342 (482)
T ss_pred CccCCCCCCCCCCCcceEEEEEEEcCcccCCceEEEEeccccCCCe
Confidence 5899999999999999999999999999999999999999999873
No 8
>PRK12853 glucose-6-phosphate 1-dehydrogenase; Provisional
Probab=100.00 E-value=1.4e-98 Score=701.88 Aligned_cols=194 Identities=43% Similarity=0.796 Sum_probs=189.6
Q ss_pred CCceEEEeccCCCCChHHHHHHHHHHhccCCCcccccccccccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCC
Q 041398 3 KGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEM 82 (196)
Q Consensus 3 ~~~~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHYLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~ 82 (196)
.||+|||||||||+||+||++||+.|+++|+|+||||||||||||+|||||+|||+|++|+|+|||+||++||||++|++
T Consensus 136 ~~~~RiviEKPFG~Dl~SA~~Ln~~l~~~f~E~qIyRIDHYLGKe~VqNil~lRFaN~~feplWNr~~I~~VqIt~~E~~ 215 (482)
T PRK12853 136 PEGRRVVLEKPFGHDLASARALNATLAKVFDEDQIYRIDHFLGKETVQNLLALRFANALLEPLWNRNHIDHVQITVAETL 215 (482)
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHHhhCCHHHeeccCccccHHHHHHHHHHHHhhHhhhhhhcccccceeEEEEecCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ccc-ccccccccchhHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhhccccCCCCcc--ccccCCC---------
Q 041398 83 GVQ-SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNV--ILGQYKA--------- 150 (196)
Q Consensus 83 gv~-R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~~~ir~eKvkvL~~i~~~~~~~~--v~GQY~~--------- 150 (196)
||| ||+|||++|||||||||||||||||||||||.++++++||+||+|||||++|++++++ |+|||.+
T Consensus 216 GvegR~~yyD~~GalRDmvQNHLlQlLalvAME~P~~~~~~~ir~eK~kvL~s~r~~~~~~v~~vrGQY~~g~~~g~~~~ 295 (482)
T PRK12853 216 GVEGRGGFYDATGALRDMVQNHLLQLLALVAMEPPASFDADAVRDEKAKVLRAIRPLDPDDVHTVRGQYTAGTVGGEPVP 295 (482)
T ss_pred CcChhhhhhcccchHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhcCCCCCcccccEEEecCcCCCCCCCCCC
Confidence 999 9999999999999999999999999999999999999999999999999999999888 9999973
Q ss_pred CCCCCCCCCCCCcccceeeeeeeeeCCCcCCCceEEEcCCCCCCCC
Q 041398 151 TSGDKVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLIRHG 196 (196)
Q Consensus 151 ~~~~e~~v~~~S~TeTfaa~~l~Idn~rW~gVPF~lrtGK~L~~~~ 196 (196)
+|++|+||+|+|+||||||++|+||||||+||||||||||+|++|.
T Consensus 296 gY~~e~gV~~~S~TeTfaa~~l~Idn~RW~GVPF~lrtGK~L~~~~ 341 (482)
T PRK12853 296 GYREEPGVDPDSRTETFVALKLEIDNWRWAGVPFYLRTGKRLAERR 341 (482)
T ss_pred CcccCCCCCCCCCCcceEEEEEEEcCcccCCCcEEEEccCCCCCce
Confidence 5899999999999999999999999999999999999999999873
No 9
>COG0364 Zwf Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-98 Score=698.15 Aligned_cols=191 Identities=45% Similarity=0.811 Sum_probs=186.2
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccccccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCcc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGVQ 85 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHYLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv~ 85 (196)
.|||||||||+||+||++||++|+.+|+|+||||||||||||+||||++|||+|.+|+|+|||+||+|||||++|++|||
T Consensus 139 ~RlviEKPfG~dL~SA~~Ln~~i~~~F~E~qIyRIDHYLGKetVQNllalRFaN~~fE~lWNr~~Id~VqIt~aE~~GvE 218 (483)
T COG0364 139 GRLVIEKPFGHDLASARELNDQISAVFKEEQIYRIDHYLGKETVQNLLALRFANAIFEPLWNRNYIDHVQITVAETLGVE 218 (483)
T ss_pred ceEEEeCCCCCCHHHHHHHHHHHHHhCChhheEeeccccCHHHHHHHHHHHHhhhhhhhhhccccceeEEEEEeeecccc
Confidence 49999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -ccccccccchhHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhhccccCC----CCccccccCCC---------C
Q 041398 86 -SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLE----PGNVILGQYKA---------T 151 (196)
Q Consensus 86 -R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~~~ir~eKvkvL~~i~~~~----~~~~v~GQY~~---------~ 151 (196)
||+|||++|||||||||||||||||+|||||+++++++||+||+|||||++|++ .+++|+|||.+ +
T Consensus 219 gRggYYD~~GalRDMvQNHlLQlL~LvAME~P~~~~ad~irdEKvKvLkal~p~~~~~~~~~~VrGQY~ag~~~g~~v~g 298 (483)
T COG0364 219 GRGGYYDKAGALRDMVQNHLLQLLCLVAMEPPASFSADDIRDEKVKVLKALRPISEENVKEDTVRGQYTAGEIDGKKVPG 298 (483)
T ss_pred ccccchhccchHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCCChhhhhhceeecceeccccCCcccCc
Confidence 999999999999999999999999999999999999999999999999999999 46789999994 4
Q ss_pred CCCCCCCCCCCcccceeeeeeeeeCCCcCCCceEEEcCCCCCCCC
Q 041398 152 SGDKVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLIRHG 196 (196)
Q Consensus 152 ~~~e~~v~~~S~TeTfaa~~l~Idn~rW~gVPF~lrtGK~L~~~~ 196 (196)
|++|+||++||+||||||++++||||||+||||||||||+|++|.
T Consensus 299 Y~eE~gv~~dS~tETFvA~k~~IdnwRW~GVPFylRtGKrl~~k~ 343 (483)
T COG0364 299 YLEEEGVAKDSNTETFVAIKLEIDNWRWAGVPFYLRTGKRLPKKV 343 (483)
T ss_pred cccCCCCCCCCCcceeEEEEEEecCCccCCCCEEEEcCCCCCCCe
Confidence 789999999999999999999999999999999999999999873
No 10
>KOG0563 consensus Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3e-92 Score=652.59 Aligned_cols=194 Identities=54% Similarity=0.949 Sum_probs=190.2
Q ss_pred CCceEEEeccCCCCChHHHHHHHHHHhccCCCcccccccccccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCC
Q 041398 3 KGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEM 82 (196)
Q Consensus 3 ~~~~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHYLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~ 82 (196)
.||+|||||||||+|++||.+|..+|.++|+|+||||||||||||||||+++|||+|++|+|+|||+||+||||+|+|++
T Consensus 153 ~GwtRvIVEKPFG~d~~Sa~~L~~~l~~~f~E~qiyRIDHYLGKemV~nl~~lRf~N~i~~~lWNR~~I~sV~I~fkE~f 232 (499)
T KOG0563|consen 153 NGWTRVIVEKPFGRDLESAQELSSELGKLFDEEQIYRIDHYLGKELVQNLLVLRFANRIFEPLWNRDYIESVQIVFKEDF 232 (499)
T ss_pred CCceEEEEecCCCCchHhHHHHHHHHHhhcCchheeeehhhhhHHHHhhhhhheecchhhcccccccceeEEEEEEeccC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ccc-ccccccccchhHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhhccccCCCCccccccCCCC-------CCC
Q 041398 83 GVQ-SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQYKAT-------SGD 154 (196)
Q Consensus 83 gv~-R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~~~ir~eKvkvL~~i~~~~~~~~v~GQY~~~-------~~~ 154 (196)
|+| ||||||++|||||||||||+|+|||+|||.|.|++|||||+||||||||++|++.+++|+|||.++ |.+
T Consensus 233 GtEGRggYfD~~GIIRDvvQNHLlQiL~LvAME~P~s~~aedir~eKVkvLks~~~v~~~dvVlGQY~~~~~g~~~gy~d 312 (499)
T KOG0563|consen 233 GTEGRGGYFDEYGIIRDVVQNHLLQILTLVAMEKPKSLDAEDIRDEKVKVLKSIRPVDLEDVVLGQYKSSSDGKVPGYLD 312 (499)
T ss_pred CccCccccccccccHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHhhcCCchhheEEeeeccccccCCCcccc
Confidence 999 999999999999999999999999999999999999999999999999999999999999999874 557
Q ss_pred CCCCCCCCcccceeeeeeeeeCCCcCCCceEEEcCCCCCCCC
Q 041398 155 KVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLIRHG 196 (196)
Q Consensus 155 e~~v~~~S~TeTfaa~~l~Idn~rW~gVPF~lrtGK~L~~~~ 196 (196)
.++|++||.||||||+.|+|||+||+||||+|+|||+|++++
T Consensus 313 d~~V~~dS~tpTfaa~~l~Idn~RW~GVPFil~aGKal~e~~ 354 (499)
T KOG0563|consen 313 DKTVPKDSLTPTFAAVALHIDNERWEGVPFILRAGKALNERK 354 (499)
T ss_pred CCCCCCCCCCcceeeEEEeecCccccCCCEEEEcccccccce
Confidence 889999999999999999999999999999999999999985
No 11
>PF02781 G6PD_C: Glucose-6-phosphate dehydrogenase, C-terminal domain; InterPro: IPR022675 Glucose-6-phosphate dehydrogenase (1.1.1.49 from EC) (G6PDH) is a ubiquitous protein, present in bacteria and all eukaryotic cell types []. The enzyme catalyses the the first step in the pentose pathway, i.e. the conversion of glucose-6-phosphate to gluconolactone 6-phosphate in the presence of NADP, producing NADPH. The ubiquitous expression of the enzyme gives it a major role in the production of NADPH for the many NADPH-mediated reductive processes in all cells []. Deficiency of G6PDH is a common genetic abnormality affecting millions of people worldwide. Many sequence variants, most caused by single point mutations, are known, exhibiting a wide variety of phenotypes []. This entry represents the C-terminal domain of glucose-6-phosphate dehydrogenase.; GO: 0004345 glucose-6-phosphate dehydrogenase activity, 0050661 NADP binding, 0006006 glucose metabolic process, 0055114 oxidation-reduction process; PDB: 1QKI_E 2BH9_A 2BHL_A 4EM5_C 4E9I_A 2DPG_A 1E77_A 1E7M_A 1H9B_A 1E7Y_A ....
Probab=100.00 E-value=1.3e-72 Score=499.84 Aligned_cols=143 Identities=51% Similarity=0.899 Sum_probs=121.6
Q ss_pred HHHHhhccccccccCcCCcCceEEEeecCCCcc-ccccccccchhHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHH
Q 041398 53 TVLRFSNLIFEPLWSRTYIRSIQVILSEEMGVQ-SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKV 131 (196)
Q Consensus 53 l~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv~-R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~~~ir~eKvkv 131 (196)
|+|||+|++|+|+|||+||+|||||++|++||+ ||+|||++|||||||||||||||||+|||||.+++++|||+||+||
T Consensus 1 l~~RFaN~~fe~lWN~~~I~~VqIt~~E~~Gve~R~~yYD~~GaiRDmvQNHllQlL~lvaMe~P~~~~~~~ir~eK~kv 80 (293)
T PF02781_consen 1 LALRFANPIFEPLWNRNYIDSVQITLAETLGVEGRGGYYDQSGAIRDMVQNHLLQLLALVAMEPPASLDAEDIRDEKVKV 80 (293)
T ss_dssp HHHHHS-HHHHTTSSTTTEEEEEEEEEESS-STSTHHHHHHHHHHHHTTTTHHHHHHHHHH----SSSSHHHHHHHHHHH
T ss_pred CcEeechHhhHhhhCccceeEEEEEEEcCcccccccccccccchHHHHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHH
Confidence 689999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred hhccccCCCCccccccCC---------CCCCCCCCCCCCCcccceeeeeeeeeCCCcCCCceEEEcCCCCCCC
Q 041398 132 LRSIRRLEPGNVILGQYK---------ATSGDKVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLIRH 195 (196)
Q Consensus 132 L~~i~~~~~~~~v~GQY~---------~~~~~e~~v~~~S~TeTfaa~~l~Idn~rW~gVPF~lrtGK~L~~~ 195 (196)
||+++|++++++|+|||. .+|++|+||+++|+||||||++|+||||||+||||||||||+|++|
T Consensus 81 L~~l~~~~~~~~V~GQY~~~~~~~~~~~gY~~e~gV~~~S~TeTf~a~~l~Idn~RW~gVPF~lrtGK~L~~k 153 (293)
T PF02781_consen 81 LRSLRPIDPEDVVRGQYTAGEIGGEEVPGYREEEGVPPDSTTETFAAVKLFIDNWRWAGVPFYLRTGKRLAEK 153 (293)
T ss_dssp HTTB----CCCEEEEEEEEESSSTGGSS-GGGSTTS-TT----SEEEEEEEB-STTTTT-EEEEEEESSBSS-
T ss_pred HHhhCCCccccccccccccCccCCccCccccccCCCCCCCCCCccEEEEEEEeCCcccCCeeeEEcccccccc
Confidence 999999999999999994 4688999999999999999999999999999999999999999987
No 12
>PF14251 DUF4346: Domain of unknown function (DUF4346)
Probab=92.45 E-value=0.11 Score=41.63 Aligned_cols=40 Identities=25% Similarity=0.307 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhccCCCcccccccc--cccHHHHHHHHHHHhh
Q 041398 19 LCSHWLTKALLSKFQEKQLYRIDH--LLGRNLIENLTVLRFS 58 (196)
Q Consensus 19 ~Sa~~L~~~l~~~f~e~~i~RIDH--YLGKe~Vqnil~lRf~ 58 (196)
.||++|-.+|.+.-.+.-|-++|| |||+|....=++|++.
T Consensus 72 rTAKeL~~~I~e~~~~~~vs~ldHA~YLGrEL~KAE~AL~~G 113 (119)
T PF14251_consen 72 RTAKELYITIIEEQRPCLVSRLDHAAYLGRELQKAEIALRSG 113 (119)
T ss_pred CCHHHHHHHHHhccCCCccchhHHHHHHHHHHHHHHHHHHcC
Confidence 589999999998777788999999 9999999999999864
No 13
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=77.92 E-value=15 Score=31.71 Aligned_cols=105 Identities=17% Similarity=0.129 Sum_probs=60.1
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.|++|-+.-.+. ..++-|.| +---+.++.+-.+--++.+ -.|.++++.+.-...-
T Consensus 92 khVl~EKPla~t~~ea~~l~~~a~~~---~~~l~v~~~~Rf~p~~~~~k~li~~g~l-------G~v~~~~~~~~~~~~~ 161 (342)
T COG0673 92 KHVLCEKPLALTLEEAEELVELARKA---GVKLMVGFNRRFDPAVQALKELIDSGAL-------GEVVSVQASFSRDRPN 161 (342)
T ss_pred CEEEEcCCCCCCHHHHHHHHHHHHHc---CCceeeehhhhcCHHHHHHHHHHhcCCc-------CceEEEEEEeeccccc
Confidence 47999999999999999998877664 33444444 2222566666555444321 2355566555444331
Q ss_pred -c--ccccc---cccchhHHHHHHHHHHHHHHHhcC-CCCCCCh
Q 041398 85 -Q--SGRYF---DGYGIIRDIVHSHILQTIALLAME-PPISLNG 121 (196)
Q Consensus 85 -~--R~~yy---d~~G~iRDmvQNHLlQlL~lvaMe-~P~s~~~ 121 (196)
. +..++ +..|++-|+---+|-+++ .+.=. +|.+..+
T Consensus 162 ~~~~~~~~~~~~~~gG~l~d~giH~lD~~~-~l~G~~~~~~v~a 204 (342)
T COG0673 162 PPPPPWWRFDRADGGGALLDLGIHDLDLLR-FLLGSPEPVSVSA 204 (342)
T ss_pred cCCccceecccccCCCchhhhHHHHHHHHH-HHcCCcchhheee
Confidence 1 11122 244799998765554444 44433 4554443
No 14
>PRK14634 hypothetical protein; Provisional
Probab=75.05 E-value=3.7 Score=33.75 Aligned_cols=37 Identities=11% Similarity=0.103 Sum_probs=33.1
Q ss_pred eEEEeccCCC--CChHHHHHHHHHHhccCCCccccccccc
Q 041398 6 NRIIIEKPFG--FDALCSHWLTKALLSKFQEKQLYRIDHL 43 (196)
Q Consensus 6 ~RiviEKPFG--~dl~Sa~~L~~~l~~~f~e~~i~RIDHY 43 (196)
.||.|+||-| -+++.|.++++.|...+++++.+ -++|
T Consensus 38 lrV~ID~~~g~~v~lddC~~vSr~is~~LD~~d~i-~~~Y 76 (155)
T PRK14634 38 LQVQIRRSSGSDVSLDDCAGFSGPMGEALEASQLL-TEAY 76 (155)
T ss_pred EEEEEECCCCCcccHHHHHHHHHHHHHHhcccccC-CCCe
Confidence 6999999999 99999999999999999988775 3555
No 15
>PRK14646 hypothetical protein; Provisional
Probab=68.35 E-value=6.8 Score=32.22 Aligned_cols=39 Identities=15% Similarity=0.126 Sum_probs=32.5
Q ss_pred Cc-eEEEeccCCC--CChHHHHHHHHHHhccCCCccccccccc
Q 041398 4 GW-NRIIIEKPFG--FDALCSHWLTKALLSKFQEKQLYRIDHL 43 (196)
Q Consensus 4 ~~-~RiviEKPFG--~dl~Sa~~L~~~l~~~f~e~~i~RIDHY 43 (196)
+| .||.|+||-| -++..|..+++.|...++++..+- ++|
T Consensus 35 ~~~LrV~IDk~~g~gVtldDC~~vSr~is~~LD~~D~i~-~~Y 76 (155)
T PRK14646 35 PIVIKIIIKKTNGDDISLDDCALFNTPASEEIENSNLLN-CSY 76 (155)
T ss_pred CeEEEEEEECCCCCCccHHHHHHHHHHHHHHhCcCCCCC-CCe
Confidence 34 6999999975 889999999999999999887654 444
No 16
>PRK11579 putative oxidoreductase; Provisional
Probab=67.04 E-value=5.7 Score=35.40 Aligned_cols=25 Identities=20% Similarity=0.311 Sum_probs=21.8
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLS 30 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~ 30 (196)
.-|++|||++.+++.|++|.+.-.+
T Consensus 89 khVl~EKPla~t~~ea~~l~~~a~~ 113 (346)
T PRK11579 89 KHVVVDKPFTVTLSQARELDALAKS 113 (346)
T ss_pred CeEEEeCCCCCCHHHHHHHHHHHHH
Confidence 4688999999999999999887665
No 17
>PRK10206 putative oxidoreductase; Provisional
Probab=64.09 E-value=6.8 Score=35.26 Aligned_cols=25 Identities=24% Similarity=0.238 Sum_probs=22.0
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLS 30 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~ 30 (196)
.-|++|||+..+++.|++|-+...+
T Consensus 89 khVl~EKPla~~~~ea~~l~~~a~~ 113 (344)
T PRK10206 89 KNVLVEKPFTPTLAEAKELFALAKS 113 (344)
T ss_pred CcEEEecCCcCCHHHHHHHHHHHHH
Confidence 4689999999999999999887665
No 18
>PRK14638 hypothetical protein; Provisional
Probab=63.37 E-value=9.5 Score=31.20 Aligned_cols=33 Identities=21% Similarity=0.385 Sum_probs=30.3
Q ss_pred eEEEeccCCC-CChHHHHHHHHHHhccCCCcccc
Q 041398 6 NRIIIEKPFG-FDALCSHWLTKALLSKFQEKQLY 38 (196)
Q Consensus 6 ~RiviEKPFG-~dl~Sa~~L~~~l~~~f~e~~i~ 38 (196)
.||.|+||-| -+++.|..+++.|...++++..+
T Consensus 39 lrV~ID~~~G~v~lddC~~vSr~is~~LD~~d~i 72 (150)
T PRK14638 39 LRIIIDNPVGYVSVRDCELFSREIERFLDREDLI 72 (150)
T ss_pred EEEEEECCCCCcCHHHHHHHHHHHHHHhcccccc
Confidence 6999999998 99999999999999999987654
No 19
>PRK14632 hypothetical protein; Provisional
Probab=62.24 E-value=10 Score=31.73 Aligned_cols=33 Identities=9% Similarity=0.147 Sum_probs=30.9
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLY 38 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~ 38 (196)
.||.|+||=|-+++.|..+++.|...++++.++
T Consensus 38 lrV~ID~~~GV~ldDC~~vSr~is~~LD~~d~i 70 (172)
T PRK14632 38 VRLFVDGPEGVTIDQCAEVSRHVGLALEVEDVI 70 (172)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHhcccccC
Confidence 699999999999999999999999999988765
No 20
>COG0779 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=61.62 E-value=11 Score=31.23 Aligned_cols=31 Identities=19% Similarity=0.140 Sum_probs=28.7
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQ 36 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~ 36 (196)
.||.++||.|-+++.|.++.+.++..|+.+.
T Consensus 39 lrI~id~~g~v~lddC~~vSr~is~~LD~ed 69 (153)
T COG0779 39 LRIYIDKEGGVTLDDCADVSRAISALLDVED 69 (153)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHhccCC
Confidence 6999999999999999999999999999444
No 21
>PRK14647 hypothetical protein; Provisional
Probab=55.88 E-value=15 Score=30.20 Aligned_cols=33 Identities=15% Similarity=0.160 Sum_probs=30.8
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLY 38 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~ 38 (196)
.||.|+||=|-+++.|..++..|...+++...+
T Consensus 39 lrV~ID~~~gvslddC~~vSr~is~~LD~~d~i 71 (159)
T PRK14647 39 LRLFIDKEGGVNLDDCAEVSRELSEILDVEDFI 71 (159)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHcccccC
Confidence 799999999999999999999999999987765
No 22
>PRK14633 hypothetical protein; Provisional
Probab=54.42 E-value=17 Score=29.61 Aligned_cols=34 Identities=18% Similarity=0.178 Sum_probs=30.8
Q ss_pred ceEEEeccCCCCChHHHHHHHHHHhccCCCcccc
Q 041398 5 WNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLY 38 (196)
Q Consensus 5 ~~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~ 38 (196)
..||.|+||=|-+++.|.++++.|...++++..+
T Consensus 33 ~lrV~ID~~~Gv~lddC~~vSr~i~~~LD~~d~i 66 (150)
T PRK14633 33 TIRIFIDHENGVSVDDCQIVSKEISAVFDVEDPV 66 (150)
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHHHhccCcCC
Confidence 3699999999999999999999999999987654
No 23
>PRK14639 hypothetical protein; Provisional
Probab=52.53 E-value=19 Score=29.06 Aligned_cols=33 Identities=21% Similarity=0.162 Sum_probs=30.6
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLY 38 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~ 38 (196)
.||.|+||=|-+++.|.++++.|...++++..+
T Consensus 28 lrV~Id~~~gv~iddC~~vSr~is~~LD~~d~i 60 (140)
T PRK14639 28 YRVYITKEGGVNLDDCERLSELLSPIFDVEPPV 60 (140)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHhcccccc
Confidence 699999999999999999999999999987654
No 24
>PRK14640 hypothetical protein; Provisional
Probab=47.97 E-value=25 Score=28.71 Aligned_cols=33 Identities=9% Similarity=0.039 Sum_probs=30.4
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLY 38 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~ 38 (196)
.||.|+||=|-+++.|..+++.|...++++..+
T Consensus 37 lrV~ID~~~gv~lddC~~vSr~is~~LD~~d~i 69 (152)
T PRK14640 37 LRVYIDGENGVSVENCAEVSHQVGAIMDVEDPI 69 (152)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHhcccccC
Confidence 699999999999999999999999999987654
No 25
>PRK14636 hypothetical protein; Provisional
Probab=47.80 E-value=25 Score=29.64 Aligned_cols=33 Identities=21% Similarity=0.165 Sum_probs=29.5
Q ss_pred eEEEeccCC--CCChHHHHHHHHHHhccCCCcccc
Q 041398 6 NRIIIEKPF--GFDALCSHWLTKALLSKFQEKQLY 38 (196)
Q Consensus 6 ~RiviEKPF--G~dl~Sa~~L~~~l~~~f~e~~i~ 38 (196)
.||.|+||- |-+++.|.+++..|...+++...+
T Consensus 36 lrV~ID~~~~ggV~lDDC~~vSr~Is~~LD~~d~i 70 (176)
T PRK14636 36 LQIMAERPDTRQLVIEDCAALSRRLSDVFDELDPI 70 (176)
T ss_pred EEEEEECCCCCCcCHHHHHHHHHHHHHHhccCcCC
Confidence 699999996 489999999999999999977664
No 26
>PRK00092 ribosome maturation protein RimP; Reviewed
Probab=44.68 E-value=30 Score=28.00 Aligned_cols=33 Identities=18% Similarity=0.157 Sum_probs=30.5
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLY 38 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~ 38 (196)
.||.|++|=|.+++.|.++++.|...+++...+
T Consensus 38 l~V~Id~~~gv~iddc~~~Sr~is~~LD~~d~i 70 (154)
T PRK00092 38 LRIYIDKEGGIDLDDCEEVSRQISAVLDVEDPI 70 (154)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHhccccCC
Confidence 699999999999999999999999999987754
No 27
>PRK02001 hypothetical protein; Validated
Probab=44.57 E-value=29 Score=28.62 Aligned_cols=32 Identities=13% Similarity=-0.008 Sum_probs=29.2
Q ss_pred ceEEEeccCCCCChHHHHHHHHHHhccCCCcc
Q 041398 5 WNRIIIEKPFGFDALCSHWLTKALLSKFQEKQ 36 (196)
Q Consensus 5 ~~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~ 36 (196)
..||+|.|+=|-+++.|.++++.|...++++.
T Consensus 32 ~lrV~ID~~~Gv~lddC~~vSr~is~~LD~~d 63 (152)
T PRK02001 32 KIVVEIDGDEGVWIEDCVELSRAIEHNLDREE 63 (152)
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHhcCCC
Confidence 37999999999999999999999999999753
No 28
>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport]
Probab=42.88 E-value=13 Score=38.54 Aligned_cols=117 Identities=21% Similarity=0.275 Sum_probs=67.0
Q ss_pred HHHHHHHHhccCCCcccccccccccHHHHHHHHHHHhhccccccccCcCCcCceEEEeec-CCCccccccccccc-hhHH
Q 041398 21 SHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSE-EMGVQSGRYFDGYG-IIRD 98 (196)
Q Consensus 21 a~~L~~~l~~~f~e~~i~RIDHYLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E-~~gv~R~~yyd~~G-~iRD 98 (196)
-.-|+..|...-.-.++||=+-|+-+ +..=+..+-|.+. =.--|+...|.+|.--+-= ..=|+=|.==..+- .=+=
T Consensus 233 L~ll~NLLK~N~SNQ~~FrE~~~i~r-L~klL~~f~~~d~-Ev~~W~~Qrv~Nv~~~Lqivr~lVsP~Nt~~~~~q~qk~ 310 (970)
T KOG0946|consen 233 LILLNNLLKNNISNQNFFREGSYIPR-LLKLLSVFEFGDG-EVFGWSTQRVQNVIEALQIVRSLVSPGNTSSITHQNQKA 310 (970)
T ss_pred HHHHHHHHhhCcchhhHHhccccHHH-HHhhcCcccccCc-ccccccHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Confidence 34567777777777788888888765 2233445556663 0125999888876421100 00000011001111 2267
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhhccccCCCCccccccCCC
Q 041398 99 IVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQYKA 150 (196)
Q Consensus 99 mvQNHLlQlL~lvaMe~P~s~~~~~ir~eKvkvL~~i~~~~~~~~v~GQY~~ 150 (196)
|.|+|||++||.++|.+- -+.||+-+-+- ...++|||-|.+
T Consensus 311 l~ss~ll~~Lc~il~~~~---vp~dIltesii--------tvAevVRgn~~n 351 (970)
T KOG0946|consen 311 LVSSHLLDVLCTILMHPG---VPADILTESII--------TVAEVVRGNARN 351 (970)
T ss_pred HHHcchHHHHHHHHcCCC---CcHhHHHHHHH--------HHHHHHHhchHH
Confidence 999999999999999873 22344433322 234689998875
No 29
>PRK14641 hypothetical protein; Provisional
Probab=40.30 E-value=35 Score=28.72 Aligned_cols=32 Identities=6% Similarity=0.257 Sum_probs=29.7
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCccc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQL 37 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i 37 (196)
.||.|+|+=|-++..|.++++.|...++++..
T Consensus 40 lrV~ID~~~gv~lDdC~~vSr~Is~~LD~~d~ 71 (173)
T PRK14641 40 IEVLLDADTGIRIDQCAFFSRRIRERLEEDEE 71 (173)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHhCcccc
Confidence 69999999999999999999999999997664
No 30
>PRK14644 hypothetical protein; Provisional
Probab=38.47 E-value=38 Score=27.32 Aligned_cols=31 Identities=16% Similarity=0.049 Sum_probs=27.5
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCccccc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYR 39 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~R 39 (196)
.||.|+|| +++.|..+++.|...+++...+-
T Consensus 29 LrV~Idk~---~iddC~~vSr~is~~LD~~d~i~ 59 (136)
T PRK14644 29 LEVILNSR---DLKDIEELTKEISDFIDNLSVEF 59 (136)
T ss_pred EEEEECCC---CHHHHHHHHHHHHHHhccccCCC
Confidence 79999998 89999999999999999876543
No 31
>PF10375 GRAB: GRIP-related Arf-binding domain ; InterPro: IPR019459 The GRIP-related Arf-binding (GRAB) domain is located towards the C terminus of Rud3 type proteins. It is related to the GRIP domain, but the conserved tyrosine residue found at position 4 in all GRIP domains is replaced by a leucine residue. The small GTPase Arf is localised to the cis-Golgi where it recruits proteins via their GRAB domain, as part of the transport of cargo from the endoplasmic reticulum to the plasma membrane [].
Probab=35.34 E-value=21 Score=20.14 Aligned_cols=14 Identities=7% Similarity=0.335 Sum_probs=10.8
Q ss_pred hhHHHHHHHHHHHH
Q 041398 95 IIRDIVHSHILQTI 108 (196)
Q Consensus 95 ~iRDmvQNHLlQlL 108 (196)
+=|.+|.||++|.|
T Consensus 6 VDk~lisN~~l~Fl 19 (19)
T PF10375_consen 6 VDKRLISNLLLSFL 19 (19)
T ss_pred HHHHHHHHHHHhcC
Confidence 34789999998853
No 32
>PRK14631 hypothetical protein; Provisional
Probab=33.75 E-value=55 Score=27.52 Aligned_cols=33 Identities=15% Similarity=0.097 Sum_probs=29.6
Q ss_pred eEEEeccC------------------CCCChHHHHHHHHHHhccCCCcccc
Q 041398 6 NRIIIEKP------------------FGFDALCSHWLTKALLSKFQEKQLY 38 (196)
Q Consensus 6 ~RiviEKP------------------FG~dl~Sa~~L~~~l~~~f~e~~i~ 38 (196)
.||.|+|| =|-+++.|..+++.|...++++..+
T Consensus 39 LrV~ID~~~~~~~~~~~~~~~~~~~~~gvtiddC~~vSr~is~~LD~~d~i 89 (174)
T PRK14631 39 LRIYIDRLVEENAEPVINEDGEVEQGRGIGVEDCVRVTQQVGAMLDVHDPI 89 (174)
T ss_pred EEEEEecCcccccccccccccccccCCCcCHHHHHHHHHHHHHHhcccccC
Confidence 69999997 5799999999999999999987765
No 33
>PF11714 Inhibitor_I53: Thrombin inhibitor Madanin ; InterPro: IPR021716 Members of this family are the peptidase inhibitor madanin proteins. These proteins were isolated from tick saliva [].
Probab=32.58 E-value=84 Score=23.44 Aligned_cols=30 Identities=20% Similarity=0.237 Sum_probs=25.0
Q ss_pred HHHHHHHHhcCCCCCCChHHHHHHHHHHhh
Q 041398 104 ILQTIALLAMEPPISLNGEDIRNEKVKVLR 133 (196)
Q Consensus 104 LlQlL~lvaMe~P~s~~~~~ir~eKvkvL~ 133 (196)
|+-++|.+.|--|.+-+++|=-.+|.++|.
T Consensus 9 lavVaSAvVMAyPe~dsAk~gnqekeral~ 38 (78)
T PF11714_consen 9 LAVVASAVVMAYPERDSAKDGNQEKERALK 38 (78)
T ss_pred HHHHHHHHHHhccccchhhhcchhhhhhhh
Confidence 445678889999999999998888888874
No 34
>PRK14635 hypothetical protein; Provisional
Probab=32.03 E-value=62 Score=26.69 Aligned_cols=36 Identities=6% Similarity=0.038 Sum_probs=29.4
Q ss_pred eEEEecc----CCCCChHHHHHHHHHHhccCCCccccccccc
Q 041398 6 NRIIIEK----PFGFDALCSHWLTKALLSKFQEKQLYRIDHL 43 (196)
Q Consensus 6 ~RiviEK----PFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHY 43 (196)
.||.|+| +=|-+++.|.++++.|...+++... ++.|
T Consensus 36 lrV~ID~~~~~~~gv~lddC~~vSr~is~~LD~~d~--~~~Y 75 (162)
T PRK14635 36 IEVVLDNLEHPYGSVSLLECEQVSRKLKEELERISP--DLDF 75 (162)
T ss_pred EEEEEecCCCCCCCcCHHHHHHHHHHHHHHhCCCCC--CCCe
Confidence 4999997 4689999999999999999997544 2454
No 35
>KOG3997 consensus Major apurinic/apyrimidinic endonuclease/3'-repair diesterase APN1 [Replication, recombination and repair]
Probab=30.63 E-value=15 Score=33.01 Aligned_cols=111 Identities=19% Similarity=0.306 Sum_probs=56.4
Q ss_pred CcCceEEEeecCCCcc--ccccccccchhHHHHHHHHHHHHHHHhcCCCCCCC-hHHHHHHH--H------------HHh
Q 041398 70 YIRSIQVILSEEMGVQ--SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLN-GEDIRNEK--V------------KVL 132 (196)
Q Consensus 70 ~I~~VqI~~~E~~gv~--R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~-~~~ir~eK--v------------kvL 132 (196)
-.++|.|...--.|-+ -|+-||..-.|.+++-+-=--=.|+=+-. .|. -=|||-++ . |-|
T Consensus 136 etk~V~ivlEnMAGqGn~vG~tfeelk~ii~~Ikdk~RigVClDTCH---~FaaGyDI~Tee~y~evmkeFdevVG~kyl 212 (281)
T KOG3997|consen 136 ETKNVIIVLENMAGQGNSVGGTFEELKFIIGKIKDKSRIGVCLDTCH---TFAAGYDIRTEEAYEEVMKEFDEVVGWKYL 212 (281)
T ss_pred hccceEEEeecccCCCCcccccHHHHHHHHHhhcchhhheeeHhhhh---hhccccccchHHHHHHHHHHHHHHhhHHHH
Confidence 3567777766566655 58889988888888876432222222111 111 12344332 1 233
Q ss_pred hccccCCCCccccccCCCCCCCCCCCCCCCcccceeeeeeeeeCCCcCCCceEEEcC
Q 041398 133 RSIRRLEPGNVILGQYKATSGDKVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAG 189 (196)
Q Consensus 133 ~~i~~~~~~~~v~GQY~~~~~~e~~v~~~S~TeTfaa~~l~Idn~rW~gVPF~lrtG 189 (196)
+++-.-+ +..-+|-=.+ + .+.+..+- =--+|.++-.++.||+|+|.+|-|-
T Consensus 213 ka~HiND-SK~~lGskrD--~-HE~iGqG~--iG~~~Frlimn~~~~dgIPliLETP 263 (281)
T KOG3997|consen 213 KAIHIND-SKAPLGSKRD--R-HEHIGQGK--IGKAAFRLIMNDNRLDGIPLILETP 263 (281)
T ss_pred hheeecC-cccccccccc--h-HHhhccch--hhHHHHHHHhccccccCcceEEeCC
Confidence 3332111 1111121100 0 11111111 1235788889999999999999874
No 36
>PF02446 Glyco_hydro_77: 4-alpha-glucanotransferase; InterPro: IPR003385 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The enzymes in this entry (2.4.1.25 from EC) belong to the glycoside hydrolase family 77 GH77 from CAZY, and transfer a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan []. They belong to the disproportionating family of enzymes.; GO: 0004134 4-alpha-glucanotransferase activity, 0005975 carbohydrate metabolic process; PDB: 1TZ7_A 2X1I_A 2OWX_A 2OWW_A 1FP9_A 1CWY_A 1ESW_A 1FP8_A 2OWC_A 1X1N_A.
Probab=29.61 E-value=24 Score=33.88 Aligned_cols=25 Identities=28% Similarity=0.486 Sum_probs=17.4
Q ss_pred HHHHHHHhccCCCcccccccccccH
Q 041398 22 HWLTKALLSKFQEKQLYRIDHLLGR 46 (196)
Q Consensus 22 ~~L~~~l~~~f~e~~i~RIDHYLGK 46 (196)
+-..+.|+..+.--.++||||.+|=
T Consensus 266 ~ww~~rl~~~~~~~d~lRIDH~~Gf 290 (496)
T PF02446_consen 266 RWWIDRLRANMRLFDALRIDHFRGF 290 (496)
T ss_dssp HHHHHHHHHHHCC-SEEEEETGGGG
T ss_pred HHHHHHHHHHHHhCCchHHHHHHHH
Confidence 3445566666666679999999983
No 37
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=27.76 E-value=56 Score=30.08 Aligned_cols=34 Identities=12% Similarity=0.157 Sum_probs=24.7
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccccc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLL 44 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHYL 44 (196)
.-|++|||+. ++.|++|-+.-.+ ....+.+.||.
T Consensus 91 kHVL~EKPla--~~Ea~el~~~A~~---~g~~l~v~~f~ 124 (343)
T TIGR01761 91 IHVLQEHPLH--PRDIQDLLRLAER---QGRRYLVNTFY 124 (343)
T ss_pred CeEEEcCCCC--HHHHHHHHHHHHH---cCCEEEEEecC
Confidence 5799999997 7888888876665 34455566643
No 38
>PRK14645 hypothetical protein; Provisional
Probab=27.46 E-value=83 Score=25.90 Aligned_cols=33 Identities=9% Similarity=-0.019 Sum_probs=28.8
Q ss_pred eEEEeccCC--CCChHHHHHHHHHHhccCCCcccc
Q 041398 6 NRIIIEKPF--GFDALCSHWLTKALLSKFQEKQLY 38 (196)
Q Consensus 6 ~RiviEKPF--G~dl~Sa~~L~~~l~~~f~e~~i~ 38 (196)
.||.|+||= |-+++.|.++++.|...++++.++
T Consensus 40 lrV~ID~~~~~~v~lddC~~vSr~is~~LD~~d~i 74 (154)
T PRK14645 40 VLVRIDRKDEQPVTVEDLERASRALEAELDRLDPI 74 (154)
T ss_pred EEEEEECCCCCCcCHHHHHHHHHHHHHHhcccccC
Confidence 599999974 499999999999999999987764
No 39
>COG4785 NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only]
Probab=27.35 E-value=32 Score=31.25 Aligned_cols=55 Identities=20% Similarity=0.389 Sum_probs=36.6
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHhcCCCCCCC-------hHHHHHHHHHHhhccccCCCC
Q 041398 85 QSGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLN-------GEDIRNEKVKVLRSIRRLEPG 141 (196)
Q Consensus 85 ~R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~-------~~~ir~eKvkvL~~i~~~~~~ 141 (196)
|||-+||+.| +|+.--|-..|-|++- =..|..++ .+.=-|+-.+.+.++-.++|.
T Consensus 70 ERGvlYDSlG-L~~LAR~DftQaLai~-P~m~~vfNyLG~Yl~~a~~fdaa~eaFds~~ELDp~ 131 (297)
T COG4785 70 ERGVLYDSLG-LRALARNDFSQALAIR-PDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT 131 (297)
T ss_pred Hhcchhhhhh-HHHHHhhhhhhhhhcC-CCcHHHHHHHHHHHHhcccchHHHHHhhhHhccCCc
Confidence 5999999999 6999999999987742 11233221 111134566777777777775
No 40
>PRK14508 4-alpha-glucanotransferase; Provisional
Probab=27.28 E-value=23 Score=34.24 Aligned_cols=23 Identities=35% Similarity=0.684 Sum_probs=16.3
Q ss_pred HHHHHHhccCCCccccccccccc
Q 041398 23 WLTKALLSKFQEKQLYRIDHLLG 45 (196)
Q Consensus 23 ~L~~~l~~~f~e~~i~RIDHYLG 45 (196)
-..+.|+..+.--.++||||++|
T Consensus 279 ww~~rlr~~~~~~~~lRIDH~~G 301 (497)
T PRK14508 279 WWIERLRRSFKLYDIVRIDHFRG 301 (497)
T ss_pred HHHHHHHHHHHhCCeEEecchhh
Confidence 34455555555556999999998
No 41
>PRK13245 hetR heterocyst differentiation control protein; Reviewed
Probab=27.21 E-value=27 Score=31.53 Aligned_cols=22 Identities=32% Similarity=0.688 Sum_probs=17.5
Q ss_pred ceeeeeeeeeCCCcCCCceEEEcC
Q 041398 166 TYFAAALYIDNASWDGVPFLIKAG 189 (196)
Q Consensus 166 Tfaa~~l~Idn~rW~gVPF~lrtG 189 (196)
-|+..+..||++ | |.|||..|-
T Consensus 191 lysgTVtrid~p-w-GmPfYaLtr 212 (299)
T PRK13245 191 LYSGTVTRIDSP-W-GMPFYALTR 212 (299)
T ss_pred hhccceeeccCC-C-CCchhheec
Confidence 377788899987 6 999997663
No 42
>TIGR00284 dihydropteroate synthase-related protein. This protein has been found so far only in the Archaea, and in particular in those archaea that lack a bacterial-type dihydropteroate synthase. The central region of this protein shows considerable homology to the amino-terminal half of dihydropteroate synthases, while the carboxyl-terminal region shows homology to the small, uncharacterized protein slr0651 of Synechocystis PCC6803.
Probab=26.30 E-value=45 Score=32.48 Aligned_cols=37 Identities=16% Similarity=0.257 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhccCCCcccccccc--cccHHHHHHHHHHHhh
Q 041398 19 LCSHWLTKALLSKFQEKQLYRIDH--LLGRNLIENLTVLRFS 58 (196)
Q Consensus 19 ~Sa~~L~~~l~~~f~e~~i~RIDH--YLGKe~Vqnil~lRf~ 58 (196)
.++++|-.+|.+ +.-+-+.|| |||.|....=++||..
T Consensus 452 ~~~~~l~~~i~~---~~~~~~~~HA~YLG~EL~kAe~Al~~g 490 (499)
T TIGR00284 452 KKPTSILRALIR---RFPVSSLEHAGYIGYELAKAEIALALG 490 (499)
T ss_pred CCHHHHHHHHHh---cCCCCChhHHHHHHHHHHHHHHHHHhC
Confidence 678888888854 346778999 9999999999999963
No 43
>PRK14642 hypothetical protein; Provisional
Probab=26.25 E-value=97 Score=26.79 Aligned_cols=34 Identities=18% Similarity=0.147 Sum_probs=28.7
Q ss_pred CceEEEeccC-------------CCCChHHHHHHHHHHhccCCCccc
Q 041398 4 GWNRIIIEKP-------------FGFDALCSHWLTKALLSKFQEKQL 37 (196)
Q Consensus 4 ~~~RiviEKP-------------FG~dl~Sa~~L~~~l~~~f~e~~i 37 (196)
+..||.|.|| =|-+++.|..++.+|...++.+..
T Consensus 27 ~~LrV~ID~~~~~~~~~~~~~~~~gVtidDC~~vSR~Is~~LDve~~ 73 (197)
T PRK14642 27 GLLRVTIDLPWVPPTEGAPVGPEQFVTVEDCEKVTRQLQFALEVDGV 73 (197)
T ss_pred CEEEEEEecCccccccccccccCCCccHHHHHHHHHHHHHHhcccCc
Confidence 4579999987 468999999999999999986653
No 44
>KOG4128 consensus Bleomycin hydrolases and aminopeptidases of cysteine protease family [Amino acid transport and metabolism]
Probab=25.65 E-value=52 Score=31.39 Aligned_cols=27 Identities=26% Similarity=0.455 Sum_probs=23.3
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCCCChH
Q 041398 95 IIRDIVHSHILQTIALLAMEPPISLNGE 122 (196)
Q Consensus 95 ~iRDmvQNHLlQlL~lvaMe~P~s~~~~ 122 (196)
.|+.||| |++-++|+..=+||..|+=+
T Consensus 209 t~~emm~-eiFrviciclg~PPe~FTWe 235 (457)
T KOG4128|consen 209 TIQEMMP-EIFRVICICLGEPPEVFTWE 235 (457)
T ss_pred HHHHHHH-HHHHHHhhhcCCCcceeeEE
Confidence 5788999 99999999999999887643
No 45
>PLN02635 disproportionating enzyme
Probab=25.52 E-value=25 Score=34.50 Aligned_cols=25 Identities=24% Similarity=0.492 Sum_probs=18.1
Q ss_pred HHHHHHHhccCCCcccccccccccH
Q 041398 22 HWLTKALLSKFQEKQLYRIDHLLGR 46 (196)
Q Consensus 22 ~~L~~~l~~~f~e~~i~RIDHYLGK 46 (196)
+-..+.|+..+..-.++||||++|=
T Consensus 304 ~ww~~Rlr~~~~~~d~lRIDHf~Gf 328 (538)
T PLN02635 304 SWWAGRMRRALELYDEFRIDHFRGF 328 (538)
T ss_pred HHHHHHHHHHHHhCCeEEecchhhh
Confidence 3345556666666779999999983
No 46
>PRK14637 hypothetical protein; Provisional
Probab=24.95 E-value=88 Score=25.64 Aligned_cols=29 Identities=14% Similarity=0.156 Sum_probs=26.5
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCC
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQE 34 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e 34 (196)
.||.|.||=|-+++.|.++++.|...+++
T Consensus 39 lrV~ID~~~gV~iddC~~vSr~Is~~LD~ 67 (151)
T PRK14637 39 VRAVIYSAGGVGLDDCARVHRILVPRLEA 67 (151)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHhcc
Confidence 69999999999999999999999887764
No 47
>PF08621 RPAP1_N: RPAP1-like, N-terminal; InterPro: IPR013930 Inhibition of RNA polymerase II-associated protein 1 (RPAP1) synthesis in Saccharomyces cerevisiae (Baker's yeast) results in changes in global gene expression that are similar to those caused by the loss of the RNAPII subunit Rpb11 []. This entry represents the N-terminal region of RPAP-1 that is conserved from yeast to humans.
Probab=24.40 E-value=55 Score=22.23 Aligned_cols=20 Identities=30% Similarity=0.526 Sum_probs=18.0
Q ss_pred CCChHHHHHHHHHHhhcccc
Q 041398 118 SLNGEDIRNEKVKVLRSIRR 137 (196)
Q Consensus 118 s~~~~~ir~eKvkvL~~i~~ 137 (196)
++++++|.+|+-+++.++.|
T Consensus 14 ~MS~eEI~~er~eL~~~LdP 33 (49)
T PF08621_consen 14 SMSPEEIEEEREELLESLDP 33 (49)
T ss_pred hCCHHHHHHHHHHHHHhCCH
Confidence 57899999999999999877
No 48
>TIGR00156 conserved hypothetical protein TIGR00156. As of the last revision, this family consists only of two proteins from Escherichia coli and one from the related species Haemophilus influenzae.
Probab=24.10 E-value=32 Score=27.75 Aligned_cols=16 Identities=25% Similarity=0.513 Sum_probs=14.4
Q ss_pred eeeeeeeCCCcCCCce
Q 041398 169 AAALYIDNASWDGVPF 184 (196)
Q Consensus 169 a~~l~Idn~rW~gVPF 184 (196)
.+++.||+..|.|.|.
T Consensus 83 ~I~VeId~~~w~G~~v 98 (126)
T TIGR00156 83 EINVVIPAAVWNGREV 98 (126)
T ss_pred CEEEEECHHHcCCCcC
Confidence 3899999999999985
No 49
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=23.96 E-value=1e+02 Score=21.88 Aligned_cols=33 Identities=12% Similarity=0.220 Sum_probs=26.3
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRI 40 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RI 40 (196)
..|++. ++|+..|.+++-+.|.+.+...++.-|
T Consensus 14 ~~vi~D--~ahNp~s~~a~l~~l~~~~~~~~~i~V 46 (91)
T PF02875_consen 14 PTVIDD--YAHNPDSIRALLEALKELYPKGRIIAV 46 (91)
T ss_dssp EEEEEE--T--SHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred cEEEEE--CCCCHHHHHHHHHHHHHhccCCcEEEE
Confidence 467777 999999999999999999988877654
No 50
>PF02576 DUF150: Uncharacterised BCR, YhbC family COG0779; InterPro: IPR003728 The RimP protein facilitates maturation of the 30S ribsomal subunit, and is required for the efficient production of translationally competent ribosmomes [].; PDB: 1IB8_A.
Probab=23.72 E-value=1.2e+02 Score=23.93 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=24.6
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLY 38 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~ 38 (196)
-||.|.|+-|-+++.+.++++.+...++++..+
T Consensus 27 l~V~id~~~gv~lddc~~~sr~i~~~LD~~d~i 59 (141)
T PF02576_consen 27 LRVFIDKDGGVSLDDCEKVSRAISALLDAEDPI 59 (141)
T ss_dssp EEEEEE-SS---HHHHHHHHHHHGGGTTTS---
T ss_pred EEEEEEeCCCCCHHHHHHHHHHHHHHHcccccc
Confidence 699999999999999999999999999986544
No 51
>COG5649 Uncharacterized conserved protein [Function unknown]
Probab=23.14 E-value=28 Score=28.26 Aligned_cols=12 Identities=25% Similarity=0.747 Sum_probs=9.9
Q ss_pred eeCCCcCCCceE
Q 041398 174 IDNASWDGVPFL 185 (196)
Q Consensus 174 Idn~rW~gVPF~ 185 (196)
+..+.|+|+||+
T Consensus 48 ~e~vKWrg~Pvw 59 (132)
T COG5649 48 HEAVKWRGSPVW 59 (132)
T ss_pred hheeeecCcccc
Confidence 455889999998
No 52
>TIGR00217 malQ 4-alpha-glucanotransferase. This enzyme is known as amylomaltase and disproportionating enzyme.
Probab=23.10 E-value=30 Score=33.66 Aligned_cols=24 Identities=38% Similarity=0.668 Sum_probs=17.8
Q ss_pred HHHHHHHhccCCCccccccccccc
Q 041398 22 HWLTKALLSKFQEKQLYRIDHLLG 45 (196)
Q Consensus 22 ~~L~~~l~~~f~e~~i~RIDHYLG 45 (196)
+-..+.|+..+.--.+.||||++|
T Consensus 292 ~ww~~rlr~~~~~~d~lRIDHf~G 315 (513)
T TIGR00217 292 EWWIKRLGANMQYADILRIDHFRG 315 (513)
T ss_pred HHHHHHHHHHHHhCCeEEecchhh
Confidence 344556666666677999999998
No 53
>PF14291 DUF4371: Domain of unknown function (DUF4371)
Probab=22.72 E-value=1.2e+02 Score=25.83 Aligned_cols=112 Identities=20% Similarity=0.201 Sum_probs=66.9
Q ss_pred HHHHHHHHHHhccCCCcccc-----cccccccHHHHHHHHHHHhhccc----cccccCcCCcCceEEEeecCCCcc-c--
Q 041398 19 LCSHWLTKALLSKFQEKQLY-----RIDHLLGRNLIENLTVLRFSNLI----FEPLWSRTYIRSIQVILSEEMGVQ-S-- 86 (196)
Q Consensus 19 ~Sa~~L~~~l~~~f~e~~i~-----RIDHYLGKe~Vqnil~lRf~N~~----~~~~Wn~~~I~~VqI~~~E~~gv~-R-- 86 (196)
..+.+|-+.+.++-++=+=. ....++.+..+||.+ -=.++.+ .+.+= .. ---|.+.|+-++. .
T Consensus 94 GNFl~ll~l~~~~d~~l~~~~~~~~~~~~~~~s~~iq~~i-~~~a~~v~~~I~~~v~-~~---~FSii~DettDis~~eQ 168 (235)
T PF14291_consen 94 GNFLELLELLAKYDPELKKHLSKNAPKNAKYSSKTIQNEI-EILADHVRQSIVEEVK-SK---YFSIIVDETTDISNKEQ 168 (235)
T ss_pred ccHHHHHHHHHhhcccchhhhhcccccceeccHHHHHHHH-HHHHHHHHHHHHhhcc-cc---ceeeeeeccccccccch
Confidence 45667777777654332111 134567777888887 3344443 44442 22 3346677777764 2
Q ss_pred ----cccccccchhHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhhccccCCCCcccccc
Q 041398 87 ----GRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQ 147 (196)
Q Consensus 87 ----~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~~~ir~eKvkvL~~i~~~~~~~~v~GQ 147 (196)
-+|.|..|.|+. + +|.++.++ +.++++|.+.=.++|.... ++.++ ++||
T Consensus 169 l~i~vRyv~~~~~i~E----~---Fl~f~~~~---~~ta~~l~~~i~~~L~~~~-l~~~~-~~gq 221 (235)
T PF14291_consen 169 LSICVRYVDKDGKIKE----R---FLGFVELE---DTTAESLFNAIKDVLEKLG-LDLSN-CRGQ 221 (235)
T ss_pred hhheeeeeccCcceee----e---eeeeeccC---CccHHHHHHHHHHHHHHcC-CCHHH-cCcc
Confidence 359998887544 4 45555554 5789999888888887643 44433 4577
No 54
>PRK14630 hypothetical protein; Provisional
Probab=21.23 E-value=1.4e+02 Score=24.24 Aligned_cols=29 Identities=21% Similarity=0.129 Sum_probs=26.3
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCC
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQE 34 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e 34 (196)
.||.|+||=|-+++.|.++++.|...+++
T Consensus 39 lrV~Id~~~gV~idDC~~vSr~i~~~ld~ 67 (143)
T PRK14630 39 IQIVLYKKDSFGVDTLCDLHKMILLILEA 67 (143)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHhcc
Confidence 69999999999999999999999887753
No 55
>PRK11052 malQ 4-alpha-glucanotransferase; Provisional
Probab=21.10 E-value=37 Score=34.39 Aligned_cols=22 Identities=27% Similarity=0.433 Sum_probs=15.1
Q ss_pred HHHHHhccCCCccccccccccc
Q 041398 24 LTKALLSKFQEKQLYRIDHLLG 45 (196)
Q Consensus 24 L~~~l~~~f~e~~i~RIDHYLG 45 (196)
..+.|+..+.--.++||||++|
T Consensus 433 w~~rlr~~~~~~g~lRIDH~~G 454 (695)
T PRK11052 433 FIDLLRANMQHCGALRIDHVMS 454 (695)
T ss_pred HHHHHHHHHHhCCEEEecchhh
Confidence 3444554555556999999998
No 56
>PRK02963 carbon starvation induced protein; Validated
Probab=20.50 E-value=1.3e+02 Score=27.98 Aligned_cols=94 Identities=16% Similarity=0.139 Sum_probs=59.2
Q ss_pred ccccchhHHHHHHHHHHHHHHHhcCC--------CCCCChHHHHHHHHHHhhcccc-CCCC--ccccccCCCCCCCCCCC
Q 041398 90 FDGYGIIRDIVHSHILQTIALLAMEP--------PISLNGEDIRNEKVKVLRSIRR-LEPG--NVILGQYKATSGDKVDV 158 (196)
Q Consensus 90 yd~~G~iRDmvQNHLlQlL~lvaMe~--------P~s~~~~~ir~eKvkvL~~i~~-~~~~--~~v~GQY~~~~~~e~~v 158 (196)
|-=+.++.+...|-|.-+|--+.-+. |...++..=.+.=+|+.++|.. |.+. +...|+|=+...-. .
T Consensus 59 f~~a~~l~~~~~~~~~~~~~~~~~~r~~g~~~~~~~~~~~~~~~~~~~~l~~~i~~~I~~t~fg~m~g~~ya~F~Vk--~ 136 (316)
T PRK02963 59 FRVAKILDDLCGNQLQPLLLKTLLDRAEGAFLINAVGIDDVAQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVK--N 136 (316)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhccccCceEeecccCCccCCHHHHHHHHHHhhhccCCCCccccccceeeEEEEE--e
Confidence 45567888999998877765554432 4444433335567788888777 6665 57889984321111 1
Q ss_pred CCCCcccceee---eeeeeeCCCcCCCceE
Q 041398 159 KLNSLTPTYFA---AALYIDNASWDGVPFL 185 (196)
Q Consensus 159 ~~~S~TeTfaa---~~l~Idn~rW~gVPF~ 185 (196)
.++|..=|+-| +.++-|++-|+-.|=+
T Consensus 137 ~~~~~~ya~~a~t~L~lHTD~pY~e~pPGl 166 (316)
T PRK02963 137 VDNSDSYLRQPHRVMELHNDGTYVEEITDY 166 (316)
T ss_pred cCCccchhhhhccCCCCcCCCCCccCCCCc
Confidence 23333333333 8999999999988844
No 57
>PLN02950 4-alpha-glucanotransferase
Probab=20.20 E-value=42 Score=35.03 Aligned_cols=24 Identities=38% Similarity=0.634 Sum_probs=17.2
Q ss_pred HHHHHHHhccCCCccccccccccc
Q 041398 22 HWLTKALLSKFQEKQLYRIDHLLG 45 (196)
Q Consensus 22 ~~L~~~l~~~f~e~~i~RIDHYLG 45 (196)
+-..+.|+..+.--.++||||.+|
T Consensus 535 ~ww~~Rlr~~~~~~d~lRIDH~~G 558 (909)
T PLN02950 535 AWWRARLTQMAKYFTAYRIDHILG 558 (909)
T ss_pred HHHHHHHHHHHHhCCEEEEecchh
Confidence 334455666666667999999999
Done!