Query 041398
Match_columns 196
No_of_seqs 122 out of 1066
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 11:03:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041398.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041398hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bh9_A G6PD, glucose-6-phospha 100.0 5E-103 2E-107 731.2 17.2 193 3-195 136-339 (489)
2 1dpg_A G6PD, glucose 6-phospha 100.0 8E-103 3E-107 729.1 12.2 193 3-195 139-343 (485)
3 4e9i_A Glucose-6-phosphate 1-d 100.0 2E-102 6E-107 733.8 14.7 193 4-196 195-395 (541)
4 4h3v_A Oxidoreductase domain p 91.3 0.59 2E-05 39.5 7.4 106 6-119 100-214 (390)
5 3ip3_A Oxidoreductase, putativ 85.8 2.7 9.2E-05 35.6 7.8 103 6-119 92-200 (337)
6 3u3x_A Oxidoreductase; structu 83.7 7 0.00024 33.6 9.7 100 6-116 113-219 (361)
7 3e9m_A Oxidoreductase, GFO/IDH 83.4 5.1 0.00018 33.8 8.5 105 6-121 92-200 (330)
8 3cea_A MYO-inositol 2-dehydrog 80.8 3 0.0001 35.0 6.1 104 6-120 96-206 (346)
9 4hkt_A Inositol 2-dehydrogenas 80.3 5.7 0.0002 33.3 7.7 103 6-120 88-192 (331)
10 4fb5_A Probable oxidoreductase 79.3 1.3 4.5E-05 37.4 3.3 100 6-117 119-226 (393)
11 4had_A Probable oxidoreductase 76.0 1.4 4.8E-05 37.3 2.6 105 6-121 111-219 (350)
12 3o9z_A Lipopolysaccaride biosy 75.6 1.9 6.5E-05 36.6 3.3 100 6-119 97-202 (312)
13 3oa2_A WBPB; oxidoreductase, s 74.4 2.1 7.2E-05 36.4 3.3 101 6-118 98-204 (318)
14 3rc1_A Sugar 3-ketoreductase; 71.8 2.6 9.1E-05 36.1 3.3 104 6-121 114-222 (350)
15 3ohs_X Trans-1,2-dihydrobenzen 71.3 2.8 9.7E-05 35.4 3.3 104 6-121 91-199 (334)
16 4ew6_A D-galactose-1-dehydroge 71.0 2.8 9.5E-05 35.8 3.3 100 6-120 106-210 (330)
17 3fhl_A Putative oxidoreductase 70.5 2.9 9.8E-05 35.9 3.2 104 6-121 90-199 (362)
18 4gqa_A NAD binding oxidoreduct 70.4 2.8 9.6E-05 36.4 3.2 100 6-117 121-229 (412)
19 3f4l_A Putative oxidoreductase 70.2 3 0.0001 35.5 3.3 104 6-121 90-195 (345)
20 1zh8_A Oxidoreductase; TM0312, 69.5 3.2 0.00011 35.3 3.3 103 6-120 107-218 (340)
21 3evn_A Oxidoreductase, GFO/IDH 69.0 3.3 0.00011 34.9 3.3 102 6-119 92-198 (329)
22 3e82_A Putative oxidoreductase 68.7 3.4 0.00011 35.6 3.3 104 6-121 92-200 (364)
23 3i23_A Oxidoreductase, GFO/IDH 68.5 3.4 0.00012 35.2 3.3 103 6-121 90-195 (349)
24 3gdo_A Uncharacterized oxidore 68.5 3.3 0.00011 35.5 3.2 104 6-121 90-198 (358)
25 1lc0_A Biliverdin reductase A; 68.4 3.6 0.00012 34.5 3.3 25 6-30 90-114 (294)
26 3dty_A Oxidoreductase, GFO/IDH 68.0 3.6 0.00012 35.8 3.4 105 6-121 110-229 (398)
27 3uuw_A Putative oxidoreductase 67.6 3.7 0.00013 34.1 3.3 25 6-30 91-115 (308)
28 3mz0_A Inositol 2-dehydrogenas 67.4 3.7 0.00013 34.8 3.2 100 6-119 91-192 (344)
29 3kux_A Putative oxidoreductase 67.2 3.9 0.00013 34.8 3.4 104 6-121 92-200 (352)
30 3e18_A Oxidoreductase; dehydro 66.8 3.8 0.00013 35.2 3.2 105 6-121 90-198 (359)
31 3oqb_A Oxidoreductase; structu 66.1 4.1 0.00014 35.0 3.3 103 6-120 108-221 (383)
32 2p2s_A Putative oxidoreductase 65.8 4.2 0.00014 34.2 3.3 25 6-30 91-115 (336)
33 3db2_A Putative NADPH-dependen 64.6 4.5 0.00015 34.4 3.2 102 6-119 91-200 (354)
34 3ec7_A Putative dehydrogenase; 64.6 4.4 0.00015 34.8 3.2 100 6-119 112-213 (357)
35 3euw_A MYO-inositol dehydrogen 64.4 5.1 0.00017 33.8 3.5 102 6-120 90-193 (344)
36 3m2t_A Probable dehydrogenase; 63.5 4.8 0.00016 34.6 3.2 104 6-121 93-200 (359)
37 3v5n_A Oxidoreductase; structu 63.1 4.9 0.00017 35.4 3.3 105 6-121 135-254 (417)
38 1ydw_A AX110P-like protein; st 62.7 5.4 0.00019 34.0 3.4 25 6-30 96-120 (362)
39 2ho3_A Oxidoreductase, GFO/IDH 61.8 5.6 0.00019 33.3 3.3 25 6-30 87-111 (325)
40 1ib8_A Conserved protein SP14. 61.2 9.5 0.00032 30.3 4.4 31 6-36 42-74 (164)
41 1tlt_A Putative oxidoreductase 61.0 6 0.0002 33.0 3.3 25 6-30 90-114 (319)
42 3q2i_A Dehydrogenase; rossmann 60.9 5.8 0.0002 33.7 3.3 104 6-121 100-211 (354)
43 3btv_A Galactose/lactose metab 60.8 5.9 0.0002 35.2 3.4 105 6-121 120-234 (438)
44 3moi_A Probable dehydrogenase; 60.1 6 0.00021 34.2 3.3 105 6-121 89-199 (387)
45 3ezy_A Dehydrogenase; structur 59.8 6.3 0.00021 33.3 3.3 103 6-120 89-193 (344)
46 2glx_A 1,5-anhydro-D-fructose 56.9 7.6 0.00026 32.3 3.3 105 6-121 87-197 (332)
47 2nvw_A Galactose/lactose metab 56.7 7.6 0.00026 35.2 3.5 104 6-120 139-253 (479)
48 3c1a_A Putative oxidoreductase 56.2 8 0.00027 32.3 3.3 25 6-30 94-118 (315)
49 1xea_A Oxidoreductase, GFO/IDH 54.8 8.7 0.0003 32.1 3.3 24 7-30 89-112 (323)
50 2ixa_A Alpha-N-acetylgalactosa 53.0 8.9 0.0003 33.9 3.2 25 6-30 116-140 (444)
51 1h6d_A Precursor form of gluco 52.8 9 0.00031 34.0 3.2 105 6-121 175-287 (433)
52 4gmf_A Yersiniabactin biosynth 37.2 33 0.0011 30.1 4.4 44 6-54 95-139 (372)
53 1tz7_A 4-alpha-glucanotransfer 27.8 17 0.00059 33.9 0.9 24 22-45 287-310 (505)
54 3qoe_A Heterocyst differentiat 25.9 17 0.00059 31.5 0.5 22 166-189 194-215 (302)
55 1x1n_A 4-alpha-glucanotransfer 23.7 13 0.00045 34.9 -0.7 22 24-45 304-325 (524)
56 1esw_A Amylomaltase; (beta,alp 23.0 16 0.00053 34.1 -0.4 22 24-45 276-297 (500)
57 3bio_A Oxidoreductase, GFO/IDH 21.1 46 0.0016 27.9 2.2 51 6-60 90-141 (304)
58 1nnx_A Protein YGIW; structura 20.7 34 0.0012 25.7 1.2 16 169-184 63-78 (109)
59 4ep4_A Crossover junction endo 20.7 60 0.0021 25.8 2.7 21 6-26 65-86 (166)
60 1vf6_A PALS-1, PALS1-associate 20.6 35 0.0012 24.9 1.2 21 91-111 26-47 (83)
No 1
>2bh9_A G6PD, glucose-6-phosphate 1-dehydrogenase; oxidoreductase, oxidoreductase (CHOH(D)-NADP), carbohydrate metabolism, glucose metabolism; HET: NAP; 2.5A {Homo sapiens} PDB: 2bhl_A* 1qki_A*
Probab=100.00 E-value=4.6e-103 Score=731.22 Aligned_cols=193 Identities=47% Similarity=0.868 Sum_probs=189.7
Q ss_pred CCceEEEeccCCCCChHHHHHHHHHHhccCCCcccccccccccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCC
Q 041398 3 KGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEM 82 (196)
Q Consensus 3 ~~~~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHYLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~ 82 (196)
.||+|||||||||+||+||++||+.|+++|+|+||||||||||||||||||+|||+|.+|+|+|||+||+|||||++|++
T Consensus 136 ~g~~RvViEKPFG~DL~SA~~Ln~~l~~~F~E~qIyRIDHYLGKE~VQNll~lRFaN~ifeplWNr~~Id~VqIt~aE~~ 215 (489)
T 2bh9_A 136 IGWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEPF 215 (489)
T ss_dssp SSCEEEEECSCSCSSHHHHHHHHHHHTTTSCGGGEEECCGGGGCHHHHHHHHHHHSCGGGSTTCSTTTEEEEEEEEECSC
T ss_pred CCceEEEEeCCCCCchhhHHHHHHHHHhhCCHHHeeecccccchHHHHHHHHHHHhhHHHHhhhcccccceEEEEEecCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ccc-ccccccccchhHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhhccccCCCCccccccCCC----------C
Q 041398 83 GVQ-SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQYKA----------T 151 (196)
Q Consensus 83 gv~-R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~~~ir~eKvkvL~~i~~~~~~~~v~GQY~~----------~ 151 (196)
||| ||+|||++|||||||||||||||||||||||.++++++||+||+|||||++|++++++|+|||.+ +
T Consensus 216 GvegRggYYD~~GalRDmvQNHLlQlL~lvAMEpP~s~~a~~iRdEKvKVLralrp~~~~~~VrGQY~~g~~~~g~~v~g 295 (489)
T 2bh9_A 216 GTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKG 295 (489)
T ss_dssp CCTTCHHHHTTTHHHHHTTTTHHHHHHHHHHCCCCSSSSHHHHHHHHHHHHTTBCCCCGGGEEEEEEECCTTSCSTTSSC
T ss_pred CccchhhhhhccchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHhccCCCCccCeEEecccCCcCCCCCCCCC
Confidence 999 99999999999999999999999999999999999999999999999999999999999999973 5
Q ss_pred CCCCCCCCCCCcccceeeeeeeeeCCCcCCCceEEEcCCCCCCC
Q 041398 152 SGDKVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLIRH 195 (196)
Q Consensus 152 ~~~e~~v~~~S~TeTfaa~~l~Idn~rW~gVPF~lrtGK~L~~~ 195 (196)
|++|+||+++|+||||||++++||||||+||||||||||+|++|
T Consensus 296 Y~~E~~V~~~S~TeTfaA~kl~IdN~RW~GVPFylRtGKrL~~r 339 (489)
T 2bh9_A 296 YLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGKALNER 339 (489)
T ss_dssp GGGCTTSCTTCCCCSEEEEEEEBCSTTTTTCEEEEEEESSCSSC
T ss_pred cccCCCCCCCCCCcceEEEEEEEcCcCcCCCCEEEEcCCCCCcc
Confidence 88999999999999999999999999999999999999999987
No 2
>1dpg_A G6PD, glucose 6-phosphate dehydrogenase; oxidoreductase, NADP/NAD, glucose metabolism, oxidoreductase (CHOH(D) - NAD(P)); 2.00A {Leuconostoc mesenteroides} SCOP: c.2.1.3 d.81.1.5 PDB: 1e7y_A* 1e7m_A* 1h93_A 1h94_A* 1h9a_A* 1e77_A* 1h9b_A 2dpg_A*
Probab=100.00 E-value=8.2e-103 Score=729.12 Aligned_cols=193 Identities=36% Similarity=0.690 Sum_probs=188.6
Q ss_pred CCceEEEeccCCCCChHHHHHHHHHHhccCCCcccccccccccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCC
Q 041398 3 KGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEM 82 (196)
Q Consensus 3 ~~~~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHYLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~ 82 (196)
.||+|||||||||+||+||++||+.|+++|+|+||||||||||||||||||+|||+|.+|+|+|||+||+|||||++|++
T Consensus 139 ~g~~RvViEKPFG~DL~SA~~Ln~~l~~~F~E~qIyRIDHYLGKE~VQNll~lRFaN~ifeplWNr~~Id~VqIt~aE~~ 218 (485)
T 1dpg_A 139 TGYNRLMIEKPFGTSYDTAAELQNDLENAFDDNQLFRIDHYLGKEMVQNIAALRFGNPIFDAAWNKDYIKNVQVTLSEVL 218 (485)
T ss_dssp SSCEEEEECSCCCSSHHHHHHHHHHHTTTCCGGGEEECCGGGGSGGGGGHHHHHHTCHHHHTTSSTTTEEEEEEEEECSC
T ss_pred CCceEEEEeCCCCCchhhHHHHHHHHHhhCCHHHEeeccccccHHHHHHHHHHHHhhHhhhhhhcccCceeEEEEEecCC
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ccc-ccccccccchhHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhhccccCCC----CccccccCCC-------
Q 041398 83 GVQ-SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEP----GNVILGQYKA------- 150 (196)
Q Consensus 83 gv~-R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~~~ir~eKvkvL~~i~~~~~----~~~v~GQY~~------- 150 (196)
||| ||+|||++|||||||||||||||||||||||.++++++||+||+|||||++|+++ +++|+|||.+
T Consensus 219 GvegRggYYD~~GalRDmvQNHLlQlL~lvAMEpP~s~~a~~iRdEKvKVLralrp~~~~~v~~~~VrGQY~~g~g~~v~ 298 (485)
T 1dpg_A 219 GVEERAGYYDTAGALLDMIQNHTMQIVGWLAMEKPESFTDKDIRAAKNAAFNALKIYDEAEVNKYFVRAQYGAGDSADFK 298 (485)
T ss_dssp CCTTCHHHHHHHHHHHHTTTTHHHHHHHHHHCCCCSSSSHHHHHHHHHHHHTTBCCCCHHHHHHHEEEEEECCCSSTTCC
T ss_pred CcChhhcchhccchHHHHHHHHHHHHHHHHHcCCccCCCHHHHHHHHHHHHhccCCCChhhhccCeEEeccCCCCCCCCC
Confidence 999 9999999999999999999999999999999999999999999999999999986 4579999985
Q ss_pred CCCCCCCCCCCCcccceeeeeeeeeCCCcCCCceEEEcCCCCCCC
Q 041398 151 TSGDKVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLIRH 195 (196)
Q Consensus 151 ~~~~e~~v~~~S~TeTfaa~~l~Idn~rW~gVPF~lrtGK~L~~~ 195 (196)
+|++|+||+++|+||||||++++||||||+||||||||||+|++|
T Consensus 299 gY~eE~gV~~~S~TeTfaA~kl~IdN~RW~GVPFyLRtGKrL~~r 343 (485)
T 1dpg_A 299 PYLEELDVPADSKNNTFIAGELQFDLPRWEGVPFYVRSGKRLAAK 343 (485)
T ss_dssp CGGGSTTCCTTCCCCSEEEEEECBCSGGGTTCCEEEEEESSBSSC
T ss_pred CccCCCCCCCCCCCCceEEEEEEEcCCccCCccEEEEecCCcccc
Confidence 689999999999999999999999999999999999999999987
No 3
>4e9i_A Glucose-6-phosphate 1-dehydrogenase; pentose phosphate pathway, alpha beta, NAD(P) rossmann-like domain, oxidoreductase; 2.85A {Trypanosoma cruzi} PDB: 4em5_A*
Probab=100.00 E-value=1.8e-102 Score=733.76 Aligned_cols=193 Identities=44% Similarity=0.794 Sum_probs=189.9
Q ss_pred CceEEEeccCCCCChHHHHHHHHHHhccCCCcccccccccccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCC
Q 041398 4 GWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMG 83 (196)
Q Consensus 4 ~~~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHYLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~g 83 (196)
||+|||||||||+||+||++||+.|+++|+|+||||||||||||||||||+|||+|.+|+|+|||+||+|||||++|++|
T Consensus 195 g~~RVVIEKPFG~DL~SA~~Ln~~L~~~F~E~QIyRIDHYLGKE~VQNll~lRFaN~ifeplWNr~~Id~VQIt~aE~~G 274 (541)
T 4e9i_A 195 GWVRLIVEKPFGRDTETSEQLSNQLKPLFNERQVFRIDHYLGKEMVQNIIVTRFANRVFSALWNSNSIACVQITFKEKIG 274 (541)
T ss_dssp CCEEEEECSCCCSSHHHHHHHHHHHTTTSCGGGEEECCGGGGSHHHHTHHHHHHSCHHHHHHCSTTTEEEEEEEEECSCC
T ss_pred CceEEEEeCCCCCchHhHHHHHHHHHhhCCHHHeecccccccHHHHHHHHHHHHhhHhhhhhhcccCccceEEEecCCcC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cc-ccccccccchhHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhhccccCCCCccccccCCC-------CCCCC
Q 041398 84 VQ-SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQYKA-------TSGDK 155 (196)
Q Consensus 84 v~-R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~~~ir~eKvkvL~~i~~~~~~~~v~GQY~~-------~~~~e 155 (196)
|| ||+|||++|||||||||||||||||||||||.++++++||+||+||||||+|++++++|+|||.+ +|++|
T Consensus 275 vegRggYYD~~GalRDmvQNHLlQlL~LvAMEpP~s~~a~~iRdEKvKVLralrpi~~~~vVrGQY~~g~~g~v~gY~~e 354 (541)
T 4e9i_A 275 TAGRGGYFDSIGIIRDVIQNHLTQILSLLTMEKPRSLSAEDIRDEKVQVLRQVVPANPAECVLGQYTASADGSTPGYLDD 354 (541)
T ss_dssp CTTCHHHHHHHHHHHHTTTTHHHHHHHHHHCCCCSSSSHHHHHHHHHHHHTTBCCCCTTSEEEEEEECCSSSSSCCGGGC
T ss_pred cccccccccccchHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHccCCCCccceEEccccCCCCCCCCCccCC
Confidence 99 99999999999999999999999999999999999999999999999999999999999999974 68999
Q ss_pred CCCCCCCcccceeeeeeeeeCCCcCCCceEEEcCCCCCCCC
Q 041398 156 VDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLIRHG 196 (196)
Q Consensus 156 ~~v~~~S~TeTfaa~~l~Idn~rW~gVPF~lrtGK~L~~~~ 196 (196)
++|+++|.||||||++|+||||||+||||||||||+|++|.
T Consensus 355 ~gV~~~S~TeTfaA~kl~IdN~RW~GVPFyLRtGKrL~~r~ 395 (541)
T 4e9i_A 355 PSVPKGSHCPTFAVLRLHVNNDRWHGVPFIIRAGKALEERL 395 (541)
T ss_dssp TTSCTTCCCCSEEEEEEEBCSTTTTTCEEEEEEESSBSSCE
T ss_pred CCCCCCCCCcccEEEEEEEcCcccCCCCEEEEccCCcCcce
Confidence 99999999999999999999999999999999999999873
No 4
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=91.28 E-value=0.59 Score=39.48 Aligned_cols=106 Identities=13% Similarity=0.109 Sum_probs=59.0
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCccccccccc-ccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHL-LGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHY-LGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.|++|.+.....=.-.-++-+.|. ---+.++.+..+--+.. + -.|.+|+..+.....-
T Consensus 100 khVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v~~~~R~~p~~~~~k~~i~~g~-i------G~i~~v~~~~~~~~~~ 172 (390)
T 4h3v_A 100 KHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMVGFTYRRVPAIALARKLVADGK-I------GTVRHVRAQYLQDWIA 172 (390)
T ss_dssp CEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHHHTTS-S------CSEEEEEEEEECCTTC
T ss_pred CCceeecCcccchhHHHHHHHHHHHHHhcCCceEEEeeeccCchHHHHHHHHHcCC-C------CcceeeEEEEeeeccC
Confidence 57999999999999999997665442222233444442 22344444443322222 2 1244555555443321
Q ss_pred c---ccc-ccc----ccchhHHHHHHHHHHHHHHHhcCCCCCC
Q 041398 85 Q---SGR-YFD----GYGIIRDIVHSHILQTIALLAMEPPISL 119 (196)
Q Consensus 85 ~---R~~-yyd----~~G~iRDmvQNHLlQlL~lvaMe~P~s~ 119 (196)
. ... ++| ..|++.|+. -|.+-++..+.=++|.+.
T Consensus 173 ~~~~~~~wr~~~~~~GgG~l~d~g-~H~iD~~~~l~G~~~~~V 214 (390)
T 4h3v_A 173 DPEAPLSWRLDKDKAGSGALGDIG-AHIVDLTQFITGDRIAEV 214 (390)
T ss_dssp STTSCCCGGGCHHHHSCSHHHHTH-HHHHHHHHHHHSCCEEEE
T ss_pred CCCCCccccccccccCCcchhhhH-HHHHHHHHHHhCCCceEE
Confidence 1 111 233 358999975 477777777765556544
No 5
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=85.76 E-value=2.7 Score=35.62 Aligned_cols=103 Identities=15% Similarity=0.094 Sum_probs=59.0
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCccc-ccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCC
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQL-YRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMG 83 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i-~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~g 83 (196)
.-|++|||++.+++.|++|.+...+.=. .+ +-+.| +---+.++.+..+--++. +. .|.+|+..+.-..+
T Consensus 92 khVl~EKPla~~~~ea~~l~~~a~~~g~--~~~~~v~~~~R~~p~~~~~k~~i~~g~-iG------~i~~i~~~~~~~~~ 162 (337)
T 3ip3_A 92 IHAFVEKPIATTFEDLEKIRSVYQKVRN--EVFFTAMFGIRYRPHFLTAKKLVSEGA-VG------EIRLVNTQKSYKLG 162 (337)
T ss_dssp CEEEECSSSCSSHHHHHHHHHHHHHHTT--TCCEEECCGGGGSHHHHHHHHHHHHTT-TS------SEEEEEEEEEBCCC
T ss_pred CcEEEeCCCCCCHHHHHHHHHHHHHhCC--ceEEEecccccCCHHHHHHHHHHhcCC-cc------ceEEEEEEecccCC
Confidence 4699999999999999999987765311 11 22332 222344444444432222 21 23344444433333
Q ss_pred ccccccccc----cchhHHHHHHHHHHHHHHHhcCCCCCC
Q 041398 84 VQSGRYFDG----YGIIRDIVHSHILQTIALLAMEPPISL 119 (196)
Q Consensus 84 v~R~~yyd~----~G~iRDmvQNHLlQlL~lvaMe~P~s~ 119 (196)
.+..||.. -|++.|+. -|.+-++..+.=++|.+.
T Consensus 163 -~~~~~~~~~~~~gG~l~d~g-~H~iD~~~~l~G~~~~~V 200 (337)
T 3ip3_A 163 -QRPDFYKKRETYGGTIPWVG-IHAIDWIHWITGKKFLSV 200 (337)
T ss_dssp -SCCGGGGSHHHHCCHHHHTT-HHHHHHHHHHHCCCEEEE
T ss_pred -CCcchhhcccccCCchhhcc-hHHHHHHHHhcCCCceEE
Confidence 14455543 58898854 688888877765556544
No 6
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=83.67 E-value=7 Score=33.61 Aligned_cols=100 Identities=12% Similarity=0.046 Sum_probs=57.6
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccccc-c-HHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCC
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLL-G-RNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMG 83 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHYL-G-Ke~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~g 83 (196)
.-|++|||++.+++.|++|.+...+. ...+.+.|-. - -+.++.+-.+--++. +. .|.+|++......+
T Consensus 113 khVl~EKPla~~~~ea~~l~~~a~~~---g~~l~v~~~~R~~~p~~~~~k~~i~~g~-iG------~i~~~~~~~~~~~~ 182 (361)
T 3u3x_A 113 KDVLVDKPGMTSFDQLAKLRRVQAET---GRIFSILYSEHFESPATVKAGELVAAGA-IG------EVVHIVGLGPHRLR 182 (361)
T ss_dssp CEEEEESCSCSSHHHHHHHHHHHHTT---CCCEEEECHHHHTCHHHHHHHHHHHTTT-TS------SEEEEEEEEECCCC
T ss_pred CeEEEeCCCCCCHHHHHHHHHHHHHc---CCEEEEechHhhCCHHHHHHHHHHHcCC-CC------CeEEEEEecccccC
Confidence 57999999999999999999877652 3455566532 2 244444443322222 21 23344444433333
Q ss_pred cc-ccc-ccc---ccchhHHHHHHHHHHHHHHHhcCCC
Q 041398 84 VQ-SGR-YFD---GYGIIRDIVHSHILQTIALLAMEPP 116 (196)
Q Consensus 84 v~-R~~-yyd---~~G~iRDmvQNHLlQlL~lvaMe~P 116 (196)
-. +.. ++| .-|++.|+.- |.+-++..+.=++|
T Consensus 183 ~~~~~~w~~~~~~~GG~l~d~g~-H~iD~~~~l~G~~~ 219 (361)
T 3u3x_A 183 RETRPDWFFRRADYGGILTDIAS-HQCEQFLFFTGVND 219 (361)
T ss_dssp GGGSCGGGTCHHHHCCHHHHHSH-HHHHHHHHHHCCSC
T ss_pred CCCCCCcccCcCccCchHHhhhh-HHHHHHHHHhCCCC
Confidence 22 444 444 3599999754 66666665554444
No 7
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=83.41 E-value=5.1 Score=33.82 Aligned_cols=105 Identities=13% Similarity=0.084 Sum_probs=62.4
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.+++|.+...+. .-.+.+.| +---+.++.+..+--++. + ..|.+|++.+.-..+-
T Consensus 92 k~vl~EKP~~~~~~e~~~l~~~a~~~---g~~~~v~~~~r~~p~~~~~k~~i~~g~-i------G~i~~i~~~~~~~~~~ 161 (330)
T 3e9m_A 92 KPVLLEKPFTLNAAEAEELFAIAQEQ---GVFLMEAQKSVFLPITQKVKATIQEGG-L------GEILWVQSVTAYPNVD 161 (330)
T ss_dssp CCEEECSSCCSSHHHHHHHHHHHHHT---TCCEEECCSGGGCHHHHHHHHHHHTTT-T------CSEEEEEEEEEESCCT
T ss_pred CeEEEeCCCCCCHHHHHHHHHHHHHc---CCeEEEEEhhhhCHHHHHHHHHHhCCC-C------CCeEEEEEEecccCCC
Confidence 46999999999999999999877663 23444444 333445555544432222 1 2345566655443311
Q ss_pred ccccccc---ccchhHHHHHHHHHHHHHHHhcCCCCCCCh
Q 041398 85 QSGRYFD---GYGIIRDIVHSHILQTIALLAMEPPISLNG 121 (196)
Q Consensus 85 ~R~~yyd---~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~ 121 (196)
...-++| .-|++.|+. -|.+-++..+.=++|.+..+
T Consensus 162 ~~~w~~~~~~ggG~l~d~g-~H~id~~~~l~G~~~~~v~a 200 (330)
T 3e9m_A 162 HIPWFYSREAGGGALHGSG-SYPLQYLQYVLGKEIQEVTG 200 (330)
T ss_dssp TCGGGGCTTTTCSHHHHHS-HHHHHHHHHHHTCCEEEEEE
T ss_pred CcCcccCcccCCCHHHHhh-HHHHHHHHHHhCCCceEEEE
Confidence 1222444 468999965 47777776666556766554
No 8
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=80.76 E-value=3 Score=35.02 Aligned_cols=104 Identities=14% Similarity=0.129 Sum_probs=57.9
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.+++|.+...+. ..-.+.+-| +-.-+.++.+..+--++. +. .|.+|++...-...
T Consensus 96 ~~v~~eKp~~~~~~~~~~l~~~a~~~--~~~~~~~~~~~r~~p~~~~~~~~i~~g~-iG------~i~~v~~~~~~~~~- 165 (346)
T 3cea_A 96 LNVFCEKPLGLDFNEVDEMAKVIKSH--PNQIFQSGFMRRYDDSYRYAKKIVDNGD-IG------KIIYMRGYGIDPIS- 165 (346)
T ss_dssp CEEEECSCCCSCHHHHHHHHHHHHTC--TTSCEECCCGGGTCHHHHHHHHHHHTTT-TC------SEEEEEEEEEEEGG-
T ss_pred CEEEEcCCCCCCHHHHHHHHHHHHhC--CCCeEEEecccccCHHHHHHHHHHHcCC-CC------CeEEEEEEecCCCC-
Confidence 46889999999999999998866542 022333333 222344555444432222 21 23444444221111
Q ss_pred ccccccc------ccchhHHHHHHHHHHHHHHHhcCCCCCCC
Q 041398 85 QSGRYFD------GYGIIRDIVHSHILQTIALLAMEPPISLN 120 (196)
Q Consensus 85 ~R~~yyd------~~G~iRDmvQNHLlQlL~lvaMe~P~s~~ 120 (196)
....|++ .-|++.|+. -|.+-++..+.=.+|.+..
T Consensus 166 ~~~~~~~~~~~~~~gG~l~d~g-~H~lD~~~~l~G~~~~~V~ 206 (346)
T 3cea_A 166 GMESFTKFATEADSGGIFVDMN-IHDIDLIRWFTGQDPVQAY 206 (346)
T ss_dssp GHHHHHHHHHHSCCCCHHHHTT-HHHHHHHHHHHSCCEEEEE
T ss_pred CChhHhhhcccCCCCchHHHhh-ccHHHHHHHHcCCCCeEEE
Confidence 0233666 468999964 6777777766654575543
No 9
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=80.32 E-value=5.7 Score=33.31 Aligned_cols=103 Identities=17% Similarity=0.163 Sum_probs=60.2
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.+++|.+...+. .-.+.+.| +---+.++.+..+--++. + ..|.+|++.......
T Consensus 88 k~v~~EKP~~~~~~~~~~l~~~a~~~---g~~~~v~~~~r~~p~~~~~~~~i~~g~-i------G~i~~~~~~~~~~~~- 156 (331)
T 4hkt_A 88 KAIFCEKPIDLDAERVRACLKVVSDT---KAKLMVGFNRRFDPHFMAVRKAIDDGR-I------GEVEMVTITSRDPSA- 156 (331)
T ss_dssp CEEEECSCSCSSHHHHHHHHHHHHHT---TCCEEECCGGGGCHHHHHHHHHHHTTT-T------CSEEEEEEEEECSSC-
T ss_pred CcEEEecCCCCCHHHHHHHHHHHHHc---CCeEEEcccccCCHHHHHHHHHHHcCC-C------CceEEEEEEecCCCC-
Confidence 56999999999999999999877652 23444444 223344554444432222 2 123445554432211
Q ss_pred ccccccc-ccchhHHHHHHHHHHHHHHHhcCCCCCCC
Q 041398 85 QSGRYFD-GYGIIRDIVHSHILQTIALLAMEPPISLN 120 (196)
Q Consensus 85 ~R~~yyd-~~G~iRDmvQNHLlQlL~lvaMe~P~s~~ 120 (196)
....|++ .-|++.|+. -|.+-++..+.=++|.+..
T Consensus 157 ~~~~~~~~~gG~l~d~g-~H~ld~~~~l~G~~~~~v~ 192 (331)
T 4hkt_A 157 PPVDYIKRSGGIFRDMT-IHDFDMARFLLGEEPVSVT 192 (331)
T ss_dssp CCHHHHHTTTCHHHHTH-HHHHHHHHHHHCSCEEEEE
T ss_pred CchhhhhcCCCeeehhe-ehHHHHHHHHhCCCccEEE
Confidence 1223443 457999976 4777877777655776544
No 10
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=79.27 E-value=1.3 Score=37.36 Aligned_cols=100 Identities=13% Similarity=0.156 Sum_probs=59.0
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.|++|-+...+. ..++-+-| +---+.++.+-.+--++. + -.|.+|++.+......
T Consensus 119 khVl~EKPla~~~~ea~~l~~~a~~~---g~~l~vg~~~R~~p~~~~~k~~i~~G~-i------G~i~~v~~~~~~~~~~ 188 (393)
T 4fb5_A 119 KHVWCEKPMAPAYADAERMLATAERS---GKVAALGYNYIQNPVMRHIRKLVGDGV-I------GRVNHVRVEMDEDFMA 188 (393)
T ss_dssp CEEEECSCSCSSHHHHHHHHHHHHHS---SSCEEECCGGGGCHHHHHHHHHHHTTT-T------CSEEEEEEEEECCTTT
T ss_pred CeEEEccCCcccHHHHHHhhhhHHhc---CCccccccccccChHHHHHHHHHHcCC-C------ccccceeeeeccccCC
Confidence 46899999999999999999877653 33444544 333345555444432222 2 2245566666554432
Q ss_pred c---cccc-c---cccchhHHHHHHHHHHHHHHHhcCCCC
Q 041398 85 Q---SGRY-F---DGYGIIRDIVHSHILQTIALLAMEPPI 117 (196)
Q Consensus 85 ~---R~~y-y---d~~G~iRDmvQNHLlQlL~lvaMe~P~ 117 (196)
. +..+ . -..|++.|+.- |.+-++..+. .+|.
T Consensus 189 ~~~~~~~~~~~~~~ggG~l~d~g~-H~iD~~~~l~-G~~~ 226 (393)
T 4fb5_A 189 DPDIFFYWKSELSAGYGALDDFAV-HPLSLLWYLF-GHVE 226 (393)
T ss_dssp CTTSCCCGGGCGGGCCBHHHHTTH-HHHHHHHHHT-CCEE
T ss_pred CccccccccccccCCCceecceee-ehHHHHHHhc-CCCe
Confidence 2 1111 1 13589999754 8888777665 4443
No 11
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=75.99 E-value=1.4 Score=37.27 Aligned_cols=105 Identities=14% Similarity=0.087 Sum_probs=54.4
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.|++|-+...+. .-++-+.| +---+.++.+-.+--++. +.. |.+|+..+.=...-
T Consensus 111 khVl~EKPla~~~~ea~~l~~~a~~~---~~~l~v~~~~R~~p~~~~~k~~i~~G~-iG~------i~~i~~~~~~~~~~ 180 (350)
T 4had_A 111 KHVVCEKPLALKAGDIDAVIAARDRN---KVVVTEAYMITYSPVWQKVRSLIDEGA-IGS------LRHVQGAFTYFNRD 180 (350)
T ss_dssp CEEEECSCCCSSGGGGHHHHHHHHHH---TCCEEECCGGGGSHHHHHHHHHHHTTT-TSS------EEEEEEEEEEECCC
T ss_pred CEEEEeCCcccchhhHHHHHHHHHHc---CCceeEeeeeecCHHHHHhhHhhhcCC-CCc------ceeeeEEEeecccc
Confidence 46899999999999999998876542 23334443 222344444433322222 221 23343332211110
Q ss_pred c-cccccc--ccchhHHHHHHHHHHHHHHHhcCCCCCCCh
Q 041398 85 Q-SGRYFD--GYGIIRDIVHSHILQTIALLAMEPPISLNG 121 (196)
Q Consensus 85 ~-R~~yyd--~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~ 121 (196)
. ...++. .-|++.|+. -|.+-++..+.=.+|.+..+
T Consensus 181 ~~~~~~~~~~gGG~l~d~g-~H~id~~~~l~G~~~~~V~a 219 (350)
T 4had_A 181 ASNMRNIPELGGGGLPDIG-VYPVMSTRFSTGKEPLRIQA 219 (350)
T ss_dssp C------------CCHHHH-HHHHHHHHHHHCCCCSEEEE
T ss_pred cccccCChhhcCCcccCCc-eehhHHHHHHcCCCceEEEE
Confidence 1 111111 237899975 58888887776656776544
No 12
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=75.58 E-value=1.9 Score=36.61 Aligned_cols=100 Identities=13% Similarity=0.020 Sum_probs=53.6
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.|++|.+.-.+. ...+.+-+ +---+.++.+..+--+. ..|.+|+..+.-..+-
T Consensus 97 khVl~EKPla~~~~ea~~l~~~a~~~---g~~~~v~~~~R~~p~~~~~k~~i~~g---------G~i~~v~~~~~~~~~~ 164 (312)
T 3o9z_A 97 ANALSEKPLVLWPEEIARLKELEART---GRRVYTVLQLRVHPSLLALKERLGQE---------KGAKDVVLTYVTGRGK 164 (312)
T ss_dssp CEEEECSSSCSCHHHHHHHHHHHHHH---CCCEEECCGGGGCHHHHHHHHHHHTC---------CSCEEEEEEEEECCCT
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHc---CCEEEEEeehhcCHHHHHHHHHHHcC---------CCEEEEEEEEEccCCC
Confidence 46899999999999999999877653 12222222 22223333333322111 3466677665432221
Q ss_pred c-ccc-ccc---ccchhHHHHHHHHHHHHHHHhcCCCCCC
Q 041398 85 Q-SGR-YFD---GYGIIRDIVHSHILQTIALLAMEPPISL 119 (196)
Q Consensus 85 ~-R~~-yyd---~~G~iRDmvQNHLlQlL~lvaMe~P~s~ 119 (196)
. ... .++ .-|++-|+- -|.+-++..+. .+|.+.
T Consensus 165 ~~~~~w~~~~~~~gG~l~d~g-~H~id~~~~l~-G~~~~v 202 (312)
T 3o9z_A 165 WYGKSWKVDEAKSGGLATNIG-IHFFDLLAWLF-GRALHV 202 (312)
T ss_dssp TGGGSGGGCHHHHCCHHHHTT-HHHHHHHHHHH-CCEEEE
T ss_pred ccccccccCcccCCCeeeecc-cCHHHHHHHHh-CCCeEE
Confidence 1 111 111 348888874 36666665444 455544
No 13
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=74.37 E-value=2.1 Score=36.43 Aligned_cols=101 Identities=13% Similarity=-0.003 Sum_probs=53.1
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.|++|.+.-.+. ...+-+-+ +---+.++.+..+--+.. + ..|.+|+..+.-..+-
T Consensus 98 khVl~EKPla~~~~ea~~l~~~a~~~---g~~~~v~~~~R~~p~~~~~k~~i~~g~-i------G~i~~v~~~~~~~~~~ 167 (318)
T 3oa2_A 98 CDVICEKPLVPTPEMLDQLAVIERET---DKRLYNILQLRHHQAIIALKDKVAREK-S------PHKYEVDLTYITSRGN 167 (318)
T ss_dssp CEEEECSSCCSCHHHHHHHHHHHHHH---TCCEEECCGGGGCHHHHHHHHHHHHS--C------SSCEEEEEEEEECCCH
T ss_pred CeEEEECCCcCCHHHHHHHHHHHHHh---CCEEEEEEhhhcCHHHHHHHHHHhcCC-C------CceEEEEEEEEecCCC
Confidence 56999999999999999999877653 12222222 222233444433322221 1 2344555555422221
Q ss_pred c-ccc-ccc---ccchhHHHHHHHHHHHHHHHhcCCCCC
Q 041398 85 Q-SGR-YFD---GYGIIRDIVHSHILQTIALLAMEPPIS 118 (196)
Q Consensus 85 ~-R~~-yyd---~~G~iRDmvQNHLlQlL~lvaMe~P~s 118 (196)
. ... .++ .-|++-|+- -|.+.++..+. .+|.+
T Consensus 168 ~~~~~w~~~~~~~gG~l~d~g-~H~id~~~~l~-G~~~~ 204 (318)
T 3oa2_A 168 WYLKSWKGDPRKSFGVATNIG-VHFYDMLHFIF-GKLQR 204 (318)
T ss_dssp HHHHSGGGCHHHHCCHHHHHH-HHHHHHHHHHH-CSEEE
T ss_pred CCCcccccCCCcCCCccccCC-cHHHHHHHHHh-CCCce
Confidence 0 011 111 358999964 47777666554 44544
No 14
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=71.80 E-value=2.6 Score=36.09 Aligned_cols=104 Identities=15% Similarity=0.136 Sum_probs=59.0
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.|++|.+...+. ...+-+.| +---+.++.+..+--++. + ..|.+|+..+.-...
T Consensus 114 k~Vl~EKP~a~~~~ea~~l~~~a~~~---g~~~~v~~~~R~~p~~~~~k~~i~~G~-i------G~i~~v~~~~~~~~~- 182 (350)
T 3rc1_A 114 KHVLAEKPLTTDRPQAERLFAVARER---GLLLMENFMFLHHPQHRQVADMLDEGV-I------GEIRSFAASFTIPPK- 182 (350)
T ss_dssp CEEEEESSSCSSHHHHHHHHHHHHHT---TCCEEEECGGGGCTHHHHHHHHHHTTT-T------CSEEEEEEEEECCCC-
T ss_pred CcEEEeCCCCCCHHHHHHHHHHHHHh---CCEEEEEecccCCHHHHHHHHHHhcCC-C------CCeEEEEEEEecCCC-
Confidence 46999999999999999999877653 23344443 222244444433322221 1 224455555432211
Q ss_pred cccc-ccc---ccchhHHHHHHHHHHHHHHHhcCCCCCCCh
Q 041398 85 QSGR-YFD---GYGIIRDIVHSHILQTIALLAMEPPISLNG 121 (196)
Q Consensus 85 ~R~~-yyd---~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~ 121 (196)
..+. .++ .-|++.|+- -|.+-++..+.=++|.+..+
T Consensus 183 ~~~~wr~~~~~gGG~l~d~g-~H~ld~~~~l~G~~~~~v~a 222 (350)
T 3rc1_A 183 PQGDIRYQADVGGGALLDIG-VYPIRAAGLFLGADLEFVGA 222 (350)
T ss_dssp CTTCGGGCTTTTCHHHHHTT-HHHHHHHHHHHCTTCEEEEE
T ss_pred CccccccCcccCccHHHHHH-HHHHHHHHHHcCCCcEEEEE
Confidence 1222 233 358999976 47777776665556765544
No 15
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=71.30 E-value=2.8 Score=35.36 Aligned_cols=104 Identities=15% Similarity=0.095 Sum_probs=60.2
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.|++|.+...+. ..++.+.| +---+.++.+..+--++. + ..|.+|+..+.-..+-
T Consensus 91 khVl~EKP~a~~~~e~~~l~~~a~~~---~~~~~v~~~~r~~p~~~~~k~~i~~g~-i------G~i~~v~~~~~~~~~~ 160 (334)
T 3ohs_X 91 KAVLCEKPMGVNAAEVREMVTEARSR---GLFLMEAIWTRFFPASEALRSVLAQGT-L------GDLRVARAEFGKNLTH 160 (334)
T ss_dssp CEEEEESSSSSSHHHHHHHHHHHHHT---TCCEEEECGGGGSHHHHHHHHHHHHTT-T------CSEEEEEEEEECCCTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHh---CCEEEEEEhHhcCHHHHHHHHHHhcCC-C------CCeEEEEEEccCCCCC
Confidence 46999999999999999999877653 23344443 223344554444332222 1 2245555555433221
Q ss_pred cccccccc---cchhHHHHHHHHHHHHHHHhc-CCCCCCCh
Q 041398 85 QSGRYFDG---YGIIRDIVHSHILQTIALLAM-EPPISLNG 121 (196)
Q Consensus 85 ~R~~yyd~---~G~iRDmvQNHLlQlL~lvaM-e~P~s~~~ 121 (196)
..++++. -|++-|+. -|.+-++..+.= ++|.+..+
T Consensus 161 -~~~~~~~~~gGG~l~d~g-~H~id~~~~l~G~~~p~~v~a 199 (334)
T 3ohs_X 161 -VPRAVDWAQAGGALLDLG-IYCVQFISMVFGGQKPEKISV 199 (334)
T ss_dssp -CHHHHCTTTTCSHHHHTH-HHHHHHHHHHTTTCCCSEEEE
T ss_pred -cCcCCCcccCCCCHHHhh-hHHHHHHHHHhCCCCCeEEEE
Confidence 1122332 48999975 477777766654 47766543
No 16
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=71.05 E-value=2.8 Score=35.80 Aligned_cols=100 Identities=15% Similarity=0.074 Sum_probs=54.6
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.+++|.+...+. ...+.+-+ +..-+.++.+..+--++ .|-.|.+.+.+....
T Consensus 106 khVl~EKP~a~~~~e~~~l~~~a~~~---g~~~~v~~~~r~~p~~~~~k~~i~~g----------~iG~v~~~~~~~~~~ 172 (330)
T 4ew6_A 106 KHVFLEKPPGATLSEVADLEALANKQ---GASLFASWHSRYAPAVEAAKAFLAST----------TIKSVHVIWKEDVRH 172 (330)
T ss_dssp CEEEECSSSCSSHHHHHHHHHHHHHH---TCCEEECCGGGGSTTHHHHHHHHHSS----------CEEEEEEEEECBHHH
T ss_pred CcEEEeCCCCCCHHHHHHHHHHHHhc---CCeEEEEehhhccHHHHHHHHHHhcC----------CceEEEEEEccCccc
Confidence 57899999999999999998876652 12222322 22233444443332222 244556655544321
Q ss_pred c--ccc-cccc-cchhHHHHHHHHHHHHHHHhcCCCCCCC
Q 041398 85 Q--SGR-YFDG-YGIIRDIVHSHILQTIALLAMEPPISLN 120 (196)
Q Consensus 85 ~--R~~-yyd~-~G~iRDmvQNHLlQlL~lvaMe~P~s~~ 120 (196)
- ... ++|. -|++.|+-- |.+-++..+. ..|.+..
T Consensus 173 ~~~~~~w~~~~ggG~l~d~g~-H~ld~~~~l~-g~~~~v~ 210 (330)
T 4ew6_A 173 WHPNQDWIWQAGGLGVFDPGI-NALSIVTHIL-PRPVFIT 210 (330)
T ss_dssp HSTTCSGGGSTTSCTTHHHHH-HHHHHHHHHS-SSCCEEE
T ss_pred cCCCCCceEcCCCcEEEEchh-HHHHHHHHHc-CCCeEEE
Confidence 1 122 3343 457888764 5556555544 4565543
No 17
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=70.46 E-value=2.9 Score=35.90 Aligned_cols=104 Identities=13% Similarity=0.116 Sum_probs=54.8
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.|++|.+...+. .-.+-+.| +---+.++.+..+--++. +. .|.+|++.+.-...-
T Consensus 90 khVl~EKP~a~~~~ea~~l~~~a~~~---g~~~~v~~~~R~~p~~~~~k~~i~~G~-iG------~i~~v~~~~~~~~~~ 159 (362)
T 3fhl_A 90 KNVVVEKPFTSTTKQGEELIALAKKK---GLMLSVYQNRRWDADFLTVRDILAKSL-LG------RLVEYESTFARYRNF 159 (362)
T ss_dssp CEEEEESSCCSSHHHHHHHHHHHHHH---TCCEEEECGGGGSHHHHHHHHHHHTTT-TS------SEEEEEEEEECBCCC
T ss_pred CeEEEecCCCCCHHHHHHHHHHHHHc---CCEEEEEecceeCHHHHHHHHHHHcCC-CC------CeEEEEEEecccCCC
Confidence 57999999999999999999877652 23334444 223344554444322221 21 233444443211110
Q ss_pred cccc-cc----cccchhHHHHHHHHHHHHHHHhcCCCCCCCh
Q 041398 85 QSGR-YF----DGYGIIRDIVHSHILQTIALLAMEPPISLNG 121 (196)
Q Consensus 85 ~R~~-yy----d~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~ 121 (196)
.+.+ ++ ..-|++.|+- -|.+-++..+. .+|.+..+
T Consensus 160 ~~~~~w~~~~~~ggG~l~d~g-~H~id~~~~l~-G~~~~V~a 199 (362)
T 3fhl_A 160 IKPNTWKETGESGGGLTYNLG-SHLIDQAIQLF-GMPEAVFA 199 (362)
T ss_dssp --------------CHHHHTH-HHHHHHHHHHH-CCEEEEEE
T ss_pred CCccccccCCCCCCceeeeeh-hhHHHHHHHHh-CCCcEEEE
Confidence 0111 11 2479999986 47777666554 47765544
No 18
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=70.45 E-value=2.8 Score=36.44 Aligned_cols=100 Identities=10% Similarity=0.009 Sum_probs=53.0
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.|++|-+.-.+. ..++-+.| +---+.++.+..+--+.. +. .|.+|+..+.-...-
T Consensus 121 khVl~EKP~a~~~~ea~~l~~~a~~~---g~~~~v~~~~R~~p~~~~~k~~i~~G~-iG------~i~~~~~~~~~~~~~ 190 (412)
T 4gqa_A 121 KHVYCEKPLAVNEQQAQEMAQAARRA---GVKTMVAFNNIKTPAALLAKQIIARGD-IG------EPVRFRGTFDQGFYN 190 (412)
T ss_dssp CEEEEESCSCSSHHHHHHHHHHHHHH---TCCEEEECGGGTSHHHHHHHHHHHHTT-TC------SEEEEEEEEECCSTT
T ss_pred CCeEeecCCcCCHHHHHHHHHHHHHh---CCeeeeccceecCHHHHHHHHHHhcCC-cC------CeEEEEEEecccccc
Confidence 46899999999999999998876542 23333443 222334444433322221 21 233444444332211
Q ss_pred c---ccc-ccc----ccchhHHHHHHHHHHHHHHHhcCCCC
Q 041398 85 Q---SGR-YFD----GYGIIRDIVHSHILQTIALLAMEPPI 117 (196)
Q Consensus 85 ~---R~~-yyd----~~G~iRDmvQNHLlQlL~lvaMe~P~ 117 (196)
. ... +++ ..|++-|+-- |.+-++..+. .+|.
T Consensus 191 ~~~~~~~wr~~~~~~GgG~l~d~g~-H~iD~~~~l~-G~~~ 229 (412)
T 4gqa_A 191 DPNLPWSWRCSKTLGGSGALGDLGA-HTLSVAQFLL-GGIR 229 (412)
T ss_dssp STTSCCCGGGCTTTTCCSHHHHTHH-HHHHHHHHHH-CCEE
T ss_pred CCCCCccceeccccCCCcchhhhhh-hHHHHHHHHh-CCCe
Confidence 1 111 222 3589999765 7777666554 3443
No 19
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=70.18 E-value=3 Score=35.45 Aligned_cols=104 Identities=14% Similarity=-0.005 Sum_probs=53.0
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCccccccccc-ccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHL-LGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHY-LGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.|++|.+...+. .-.+-+.|- ---+.++.+..+--++. +.. |.+|+..+.-...-
T Consensus 90 k~Vl~EKP~a~~~~e~~~l~~~a~~~---g~~~~v~~~~r~~p~~~~~~~~i~~g~-iG~------i~~~~~~~~~~~~~ 159 (345)
T 3f4l_A 90 KNVLVEKPFTPTLAQAKELFALAKSK---GLTVTPYQNRRFDSCFLTAKKAIESGK-LGE------IVEVESHFDYYRPV 159 (345)
T ss_dssp CEEEECSSSCSSHHHHHHHHHHHHHH---TCCEEECCGGGGCHHHHHHHHHHHHST-TCS------EEEEEEECCCBCCC
T ss_pred CcEEEeCCCCCCHHHHHHHHHHHHHc---CCeEEEEechhcCHHHHHHHHHHhcCC-CCC------eEEEEEEeeccCCc
Confidence 57999999999999999999877653 222333331 22234444433322221 211 22333332110000
Q ss_pred cc-cccccccchhHHHHHHHHHHHHHHHhcCCCCCCCh
Q 041398 85 QS-GRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNG 121 (196)
Q Consensus 85 ~R-~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~ 121 (196)
.+ ..-...-|++.|+- -|.+-++..+. .+|.+..+
T Consensus 160 ~~~~~~~~~gG~l~d~g-~H~id~~~~l~-G~~~~v~a 195 (345)
T 3f4l_A 160 AETKPGLPQDGAFYGLG-VHTMDQIISLF-GRPDHVAY 195 (345)
T ss_dssp CCCCCCCGGGSHHHHTH-HHHHHHHHHHH-CSCSEEEE
T ss_pred cccCCCCCCCchhheeh-HHHHHHHHHHh-CCCeEEEE
Confidence 00 01112358999975 47777665554 45765443
No 20
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=69.51 E-value=3.2 Score=35.31 Aligned_cols=103 Identities=13% Similarity=-0.018 Sum_probs=55.6
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.|++|.+...+. ..++-+.| +---+.++.+..+--++ .+. .|.+|++.+.-...-
T Consensus 107 khVl~EKPla~~~~ea~~l~~~a~~~---g~~~~v~~~~R~~p~~~~~k~~i~~g-~iG------~i~~v~~~~~~~~~~ 176 (340)
T 1zh8_A 107 VHVICEKPISTDVETGKKVVELSEKS---EKTVYIAENFRHVPAFWKAKELVESG-AIG------DPVFMNWQIWVGMDE 176 (340)
T ss_dssp CEEEEESSSSSSHHHHHHHHHHHHHC---SSCEEEECGGGGCHHHHHHHHHHHTT-TTS------SEEEEEEEEEBCCCT
T ss_pred CcEEEeCCCCCCHHHHHHHHHHHHHc---CCeEEEEecccCCHHHHHHHHHHhcC-CCC------CcEEEEEEEeccccc
Confidence 46899999999999999999877652 23344443 23334444444332222 122 244455543222110
Q ss_pred ----ccccc-cc---ccchhHHHHHHHHHHHHHHHhcCCCCCCC
Q 041398 85 ----QSGRY-FD---GYGIIRDIVHSHILQTIALLAMEPPISLN 120 (196)
Q Consensus 85 ----~R~~y-yd---~~G~iRDmvQNHLlQlL~lvaMe~P~s~~ 120 (196)
.++.+ ++ .-|++-|+.- |.+-++..+. .+|.+..
T Consensus 177 ~~~~~~~~w~~~~~~~GG~l~d~g~-H~ld~~~~l~-G~~~~V~ 218 (340)
T 1zh8_A 177 NNKYVHTDWRKKPKHVGGFLSDGGV-HHAAAMRLIL-GEIEWIS 218 (340)
T ss_dssp TCSGGGCHHHHTTCSTTTHHHHHHH-HHHHHHHHHH-CCEEEEE
T ss_pred cCCCCCcCceECCcCCCceeeeccH-HHHHHHHHhh-CCCeEEE
Confidence 01111 11 3489999644 7777766554 3665543
No 21
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=68.97 E-value=3.3 Score=34.90 Aligned_cols=102 Identities=14% Similarity=0.060 Sum_probs=58.2
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.+++|.+...+. .-.+-+-| +---+.++.+..+--++. + ..|.+|+..+.-.. .
T Consensus 92 k~Vl~EKP~a~~~~e~~~l~~~a~~~---~~~~~v~~~~r~~p~~~~~~~~i~~g~-i------G~i~~v~~~~~~~~-~ 160 (329)
T 3evn_A 92 KHVLVEKPFTLTYDQANELFALAESC---NLFLMEAQKSVFIPMTQVIKKLLASGE-I------GEVISISSTTAYPN-I 160 (329)
T ss_dssp CEEEEESSCCSSHHHHHHHHHHHHHT---TCCEEEECSSCSSHHHHHHHHHHHTTT-T------CSEEEEEEEEECTT-G
T ss_pred CeEEEccCCcCCHHHHHHHHHHHHHc---CCEEEEEEcccCCHHHHHHHHHHhCCC-C------CCeEEEEEEeccCC-C
Confidence 46899999999999999998877653 22333333 222345555544432222 1 22444555443211 1
Q ss_pred cccc-ccc---ccchhHHHHHHHHHHHHHHHhcCCCCCC
Q 041398 85 QSGR-YFD---GYGIIRDIVHSHILQTIALLAMEPPISL 119 (196)
Q Consensus 85 ~R~~-yyd---~~G~iRDmvQNHLlQlL~lvaMe~P~s~ 119 (196)
.+.. ++| .-|++.|+. -|.+-++..+.=++|.+.
T Consensus 161 ~~~~w~~~~~~gGG~l~d~g-~H~id~~~~l~G~~~~~v 198 (329)
T 3evn_A 161 DHVTWFRELELGGGTVHFMA-PYALSYLQYLFDATITHA 198 (329)
T ss_dssp GGSTTTTCGGGTCSHHHHHH-HHHHHHHHHHTTCCEEEE
T ss_pred CCcccccCcccCCcHHHHHH-HHHHHHHHHHhCCCceEE
Confidence 2323 332 568999975 477777776665566543
No 22
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=68.72 E-value=3.4 Score=35.63 Aligned_cols=104 Identities=16% Similarity=0.182 Sum_probs=54.4
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCccccccccc-ccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHL-LGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHY-LGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.|++|.+...+. .-++-+.|- ---+.++.+..+--++. +. .|.+|+..+.-...-
T Consensus 92 k~Vl~EKPla~~~~e~~~l~~~a~~~---g~~~~v~~~~r~~p~~~~~~~~i~~g~-iG------~i~~~~~~~~~~~~~ 161 (364)
T 3e82_A 92 KHVVVDKPFTLDMQEARELIALAEEK---QRLLSVFHNRRWDSDYLGIRQVIEQGT-LG------AVKHFESHFDRFRPE 161 (364)
T ss_dssp CEEEECSCSCSSHHHHHHHHHHHHHT---TCCEEECCCCTTCHHHHHHHHHHHHTT-TC------SEEEEEEEEECBCCC
T ss_pred CcEEEeCCCcCCHHHHHHHHHHHHHh---CCeEEEEeecccCHHHHHHHHHHHcCC-Cc------ceEEEEEEeeccCCC
Confidence 56899999999999999999877662 234444442 22334444433322222 21 123344433211110
Q ss_pred cccccc----cccchhHHHHHHHHHHHHHHHhcCCCCCCCh
Q 041398 85 QSGRYF----DGYGIIRDIVHSHILQTIALLAMEPPISLNG 121 (196)
Q Consensus 85 ~R~~yy----d~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~ 121 (196)
.+.+++ ..-|++.|+.- |.+-++..+. .+|.+..+
T Consensus 162 ~~~~w~~~~~~ggG~l~d~g~-H~id~~~~l~-G~p~~V~a 200 (364)
T 3e82_A 162 VRVRWREQNVPGSGLWFDLGP-HLIDQALQLF-GLPQSVQG 200 (364)
T ss_dssp C-----------CCHHHHHHH-HHHHHHHHHH-CCCSEEEE
T ss_pred CCcccccCCCCCCChHHhhhh-HHHHHHHHHh-CCCeEEEE
Confidence 022222 25689999864 6666665544 46766544
No 23
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=68.52 E-value=3.4 Score=35.20 Aligned_cols=103 Identities=12% Similarity=-0.009 Sum_probs=55.6
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCccccccccc-ccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCC-
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHL-LGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMG- 83 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHY-LGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~g- 83 (196)
.-|++|||++.+++.|++|.+...+. .-.+-+.|- ---+.++.+..+--++. +. .|.+|+..+.-...
T Consensus 90 k~Vl~EKP~a~~~~e~~~l~~~a~~~---g~~~~v~~~~r~~p~~~~~~~~i~~g~-iG------~i~~~~~~~~~~~~~ 159 (349)
T 3i23_A 90 KSVIVEKPFCDTLEHAEELFALGQEK---GVVVMPYQNRRFDGDYLAMKQVVEQGF-LG------EINEVETHIDYYRPG 159 (349)
T ss_dssp CEEEECSCSCSSHHHHHHHHHHHHHT---TCCEEECCGGGGCHHHHHHHHHHHHTT-TC------SEEEEEEECCCBCTT
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHc---CCeEEEEecccCCHHHHHHHHHHhcCC-CC------CEEEEEEEecccCCc
Confidence 56899999999999999999877653 223334331 12233444433322222 11 13334443321111
Q ss_pred cc-ccccccccchhHHHHHHHHHHHHHHHhcCCCCCCCh
Q 041398 84 VQ-SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNG 121 (196)
Q Consensus 84 v~-R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~ 121 (196)
-. |... ..-|++.|+.- |.+-++..+. .+|.+..+
T Consensus 160 ~~w~~~~-~ggG~l~d~g~-H~id~~~~l~-G~p~~V~a 195 (349)
T 3i23_A 160 SITEQGP-KENGSFYGLGI-HLMDRMIALF-GRPDQVTY 195 (349)
T ss_dssp SCCSCCC-GGGSHHHHTHH-HHHHHHHHHH-CCCSEEEE
T ss_pred hhhcccC-CCCCeehhhhh-HHHHHHHHHh-CCCeEEEE
Confidence 01 2222 45799999864 6666655544 37766544
No 24
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=68.45 E-value=3.3 Score=35.49 Aligned_cols=104 Identities=21% Similarity=0.183 Sum_probs=57.3
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.|++|.+...+. ..++-+.| +---+.++.+..+--+.. + ..|.+|+..+.-...-
T Consensus 90 khVl~EKPla~~~~e~~~l~~~a~~~---g~~~~v~~~~r~~p~~~~~k~~i~~g~-i------G~i~~~~~~~~~~~~~ 159 (358)
T 3gdo_A 90 KHVVMEKPMTATAEEGETLKRAADEK---GVLLSVYHNRRWDNDFLTIKKLISEGS-L------EDINTYQVSYNRYRPE 159 (358)
T ss_dssp CEEEEESSCCSSHHHHHHHHHHHHHH---TCCEEEECGGGGSHHHHHHHHHHHTTS-S------CSCCEEEEECCCBCCC
T ss_pred CeEEEecCCcCCHHHHHHHHHHHHHc---CCeEEEeeecccCHHHHHHHHHHhcCC-C------CceEEEEEEEeccCCC
Confidence 57899999999999999999877653 23344444 233445555544432222 2 1234444443211110
Q ss_pred cccccc----cccchhHHHHHHHHHHHHHHHhcCCCCCCCh
Q 041398 85 QSGRYF----DGYGIIRDIVHSHILQTIALLAMEPPISLNG 121 (196)
Q Consensus 85 ~R~~yy----d~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~ 121 (196)
.+.+++ ..-|++.|+. -|.+-++..+. .+|.+..+
T Consensus 160 ~~~~w~~~~~~ggG~l~d~g-~H~id~~~~l~-G~~~~V~a 198 (358)
T 3gdo_A 160 VQARWREKEGTATGTLYDLG-SHIIDQTLHLF-GMPKAVTA 198 (358)
T ss_dssp C----------CCSHHHHTH-HHHHHHHHHHH-CCCSEEEE
T ss_pred CCcccccCCCCCCceeeeeh-hHHHHHHHHHc-CCCeEEEE
Confidence 122222 2459999976 47777766554 47766554
No 25
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=68.37 E-value=3.6 Score=34.50 Aligned_cols=25 Identities=12% Similarity=0.213 Sum_probs=21.9
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLS 30 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~ 30 (196)
.-|++|||+..+++.+++|.+...+
T Consensus 90 khVl~EKPla~~~~ea~~l~~~a~~ 114 (294)
T 1lc0_A 90 KHVLVEYPMTLSFAAAQELWELAAQ 114 (294)
T ss_dssp CEEEEESCSCSCHHHHHHHHHHHHH
T ss_pred CcEEEeCCCCCCHHHHHHHHHHHHH
Confidence 3588999999999999999987765
No 26
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=67.98 E-value=3.6 Score=35.82 Aligned_cols=105 Identities=14% Similarity=0.169 Sum_probs=60.3
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.|++|.+...+. ...+-+.| |-.-+.++.+-.+--++. + -.|.+|++.+.-...-
T Consensus 110 khVl~EKPla~~~~ea~~l~~~a~~~---g~~~~v~~~~r~~p~~~~~k~~i~~G~-i------G~i~~v~~~~~~~~~~ 179 (398)
T 3dty_A 110 LHVVCEKPLCFTVEQAENLRELSHKH---NRIVGVTYGYAGHQLIEQAREMIAAGE-L------GDVRMVHMQFAHGFHS 179 (398)
T ss_dssp CEEEECSCSCSCHHHHHHHHHHHHHT---TCCEEECCGGGGSHHHHHHHHHHHTTT-T------CSEEEEEEEEECCTTC
T ss_pred CeEEEeCCCcCCHHHHHHHHHHHHHc---CCeEEEEecccCCHHHHHHHHHHhcCC-C------CCeEEEEEEEeccccc
Confidence 47899999999999999999977763 33444554 444566666555433322 2 1244555554322110
Q ss_pred c-------ccc-cccc-----cchhHHHHHHHHHHHHHHHhcC-CCCCCCh
Q 041398 85 Q-------SGR-YFDG-----YGIIRDIVHSHILQTIALLAME-PPISLNG 121 (196)
Q Consensus 85 ~-------R~~-yyd~-----~G~iRDmvQNHLlQlL~lvaMe-~P~s~~~ 121 (196)
. +.. .+|. .|++.|+- -|.+.++..+.+. +|.+..+
T Consensus 180 ~~~~~~~~~~~Wr~~~~~~G~gG~l~d~g-~H~idl~~~l~~G~~~~~V~a 229 (398)
T 3dty_A 180 APVEAQSQATQWRVDPRQAGPSYVLGDVG-THPLYLSEVMLPDLKIKRLMC 229 (398)
T ss_dssp C------------------CCCSHHHHTT-HHHHHHHHHHCTTCCEEEEEE
T ss_pred CccccccCCCCcccCHHHcCCccHHHHHH-HHHHHHHHHHhcCCCcEEEEE
Confidence 0 111 1222 37999974 4888888887344 6766543
No 27
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=67.61 E-value=3.7 Score=34.10 Aligned_cols=25 Identities=12% Similarity=0.126 Sum_probs=22.2
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLS 30 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~ 30 (196)
.-|++|||++.+++.+++|.+...+
T Consensus 91 k~vl~EKP~~~~~~~~~~l~~~a~~ 115 (308)
T 3uuw_A 91 VHVYVDKPLASTVSQGEELIELSTK 115 (308)
T ss_dssp CEEEECSSSSSSHHHHHHHHHHHHH
T ss_pred CcEEEcCCCCCCHHHHHHHHHHHHH
Confidence 4589999999999999999987765
No 28
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=67.45 E-value=3.7 Score=34.80 Aligned_cols=100 Identities=11% Similarity=0.042 Sum_probs=56.0
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccc-cccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCC
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLY-RIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMG 83 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~-RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~g 83 (196)
.-|++|||++.+++.|++|.+...+. ...+ .+.| +---+.++.+..+--++. +. .|.+|++...-.
T Consensus 91 k~vl~EKP~a~~~~e~~~l~~~a~~~---g~~~~~v~~~~r~~p~~~~~k~~i~~g~-iG------~i~~v~~~~~~~-- 158 (344)
T 3mz0_A 91 KYVFCEKPLATTAEGCMRIVEEEIKV---GKRLVQVGFMRRYDSGYVQLKEALDNHV-IG------EPLMIHCAHRNP-- 158 (344)
T ss_dssp CEEEECSCSCSSHHHHHHHHHHHHHH---SSCCEEECCGGGGSHHHHHHHHHHHTTT-TS------SEEEEEEEEECS--
T ss_pred CcEEEcCCCCCCHHHHHHHHHHHHHH---CCEEEEEecccccCHHHHHHHHHHHcCC-CC------CcEEEEEEecCC--
Confidence 57999999999999999999876642 1112 3333 223345555544432222 11 123344433211
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHhcCCCCCC
Q 041398 84 VQSGRYFDGYGIIRDIVHSHILQTIALLAMEPPISL 119 (196)
Q Consensus 84 v~R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~ 119 (196)
.....|..-|++.|+. -|.+-++..+.=++|.+.
T Consensus 159 -~~~~~w~ggg~l~d~g-~H~id~~~~l~G~~~~~V 192 (344)
T 3mz0_A 159 -TVGDNYTTDMAVVDTL-VHEIDVLHWLVNDDYESV 192 (344)
T ss_dssp -CCCTTCCTTHHHHTTT-HHHHHHHHHHHTCCEEEE
T ss_pred -CCCccccCCchhhhhh-hHHHHHHHHhcCCCcEEE
Confidence 1123455678888854 477787777765556543
No 29
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=67.25 E-value=3.9 Score=34.85 Aligned_cols=104 Identities=18% Similarity=0.149 Sum_probs=57.3
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCccccccccc-ccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHL-LGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHY-LGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.+++|.+...+. ..++.+.|- ---+.++.+..+--++. +. .|.+|+..+.-...-
T Consensus 92 khV~~EKPla~~~~e~~~l~~~a~~~---g~~~~v~~~~r~~p~~~~~~~~i~~g~-iG------~i~~~~~~~~~~~~~ 161 (352)
T 3kux_A 92 KHVVVDKPFTVTLSQANALKEHADDA---GLLLSVFHNRRWDSDFLTLKTLLAEGS-LG------NVVYFESHFDRYRPE 161 (352)
T ss_dssp CEEEECSSCCSCHHHHHHHHHHHHHT---TCCEEECCGGGGCHHHHHHHHHHHHTT-TC------SEEEEEEEEECBCCS
T ss_pred CcEEEECCCcCCHHHHHHHHHHHHHc---CCeEEEEeecccCHHHHHHHHHHhcCC-CC------ceEEEEEEEeccCCC
Confidence 46899999999999999999877663 234444442 22344444443322222 21 133444443221110
Q ss_pred cccccc----cccchhHHHHHHHHHHHHHHHhcCCCCCCCh
Q 041398 85 QSGRYF----DGYGIIRDIVHSHILQTIALLAMEPPISLNG 121 (196)
Q Consensus 85 ~R~~yy----d~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~ 121 (196)
.+.+++ ..-|++.|+- -|.+-++..+. .+|.+..+
T Consensus 162 ~~~~w~~~~~~ggG~l~d~g-~H~id~~~~l~-G~p~~v~a 200 (352)
T 3kux_A 162 IRQRWREQAGAGGGIWYDLG-PHLLDQALQLF-GLPETLNV 200 (352)
T ss_dssp SCSSCSCC---CBCHHHHHH-HHHHHHHHHHH-CCCSEEEE
T ss_pred CCcccccCCCCCCceeehhh-hHHHHHHHHHh-CCCeEEEE
Confidence 022222 2468999985 47777666554 45766544
No 30
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=66.80 E-value=3.8 Score=35.24 Aligned_cols=105 Identities=10% Similarity=0.087 Sum_probs=56.6
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.|++|.+...+. ...+-+-| +-.-+.++.+..+--++. +.. |.+|+..+.-.-+.
T Consensus 90 khVl~EKP~a~~~~ea~~l~~~a~~~---g~~~~v~~~~r~~p~~~~~k~~i~~g~-iG~------i~~~~~~~~~~~~~ 159 (359)
T 3e18_A 90 KHVVCEKPVTMTSEDLLAIMDVAKRV---NKHFMVHQNRRWDEDFLIIKEMFEQKT-IGE------MFHLESRVHGANGI 159 (359)
T ss_dssp CEEEEESSCCSSHHHHHHHHHHHHHH---TCCEEEECGGGGCHHHHHHHHHHHHTT-TSS------EEEEEEEEECSSCS
T ss_pred CCEEeeCCCcCCHHHHHHHHHHHHHh---CCeEEEEeeeccCHHHHHHHHHHHcCC-CCC------eEEEEEEEecCCCC
Confidence 56999999999999999999877653 22334443 222344444443322222 211 22333333211111
Q ss_pred --c-ccccccccchhHHHHHHHHHHHHHHHhcCCCCCCCh
Q 041398 85 --Q-SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNG 121 (196)
Q Consensus 85 --~-R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~ 121 (196)
. |..-=..-|++-|+. -|.+.++..+.=++|.+..+
T Consensus 160 ~~~wr~~~~~gGG~l~d~g-~H~iD~~~~l~G~~~~~v~a 198 (359)
T 3e18_A 160 PGDWRHLKAHGGGMVLDWG-VHLLDQLLFLVDSNVKSVSA 198 (359)
T ss_dssp CSSGGGCGGGTCSHHHHTH-HHHHHHHHHHCCSCEEEEEE
T ss_pred CCCcccCcCCCCcHHHHHh-hHHHHHHHHHhCCCCeEEEE
Confidence 1 221112458999975 57777776665446765543
No 31
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=66.12 E-value=4.1 Score=34.96 Aligned_cols=103 Identities=21% Similarity=0.127 Sum_probs=57.9
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeec----
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSE---- 80 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E---- 80 (196)
.-|++|||++.+++.+++|.+...+. .-.+.+-| +-.-+.++.+..+--++. + ..|.+|++.+.-
T Consensus 108 k~V~~EKP~a~~~~~~~~l~~~a~~~---~~~~~v~~~~r~~p~~~~~~~~i~~g~-i------G~i~~~~~~~~~~~~~ 177 (383)
T 3oqb_A 108 KHVYCEKPIATNFEEALEVVKLANSK---GVKHGTVQDKLFLPGLKKIAFLRDSGF-F------GRILSVRGEFGYWVFE 177 (383)
T ss_dssp CEEEECSCSCSSHHHHHHHHHHHHHT---TCCEEECCGGGGSHHHHHHHHHHHTTT-T------SSEEEEEEEEECCCCC
T ss_pred CeEEEcCCCCCCHHHHHHHHHHHHHc---CCeEEEEeccccCHHHHHHHHHHHcCC-C------CCcEEEEEEecccccc
Confidence 46889999999999999999877663 22344444 334556665555433332 1 123344444321
Q ss_pred -CCCcc-cccc-cc---ccchhHHHHHHHHHHHHHHHhcCCCCCCC
Q 041398 81 -EMGVQ-SGRY-FD---GYGIIRDIVHSHILQTIALLAMEPPISLN 120 (196)
Q Consensus 81 -~~gv~-R~~y-yd---~~G~iRDmvQNHLlQlL~lvaMe~P~s~~ 120 (196)
...-. |..+ |+ .-|++.|+. -|.+-++..+. .+|.+..
T Consensus 178 ~~~~~~~~~~w~~~~~~ggG~l~d~g-~H~id~~~~l~-G~~~~v~ 221 (383)
T 3oqb_A 178 GGWQEAQRPSWNYRDEDGGGIILDMV-CHWRYVLDNLF-GNVQSVV 221 (383)
T ss_dssp SSSSCCSSCGGGGCTTTTCCHHHHHH-HHHHHHHHHHT-CCEEEEE
T ss_pred ccccccCCCCcccccccCCceeeehh-hHHHHHHHHHc-CCCeEEE
Confidence 11101 3332 32 459999964 47667665543 4665543
No 32
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=65.79 E-value=4.2 Score=34.21 Aligned_cols=25 Identities=8% Similarity=-0.060 Sum_probs=21.8
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLS 30 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~ 30 (196)
.-|++|||+..+++.|++|.+...+
T Consensus 91 khVl~EKP~a~~~~e~~~l~~~a~~ 115 (336)
T 2p2s_A 91 KDFFTAKPPLTTLEQLDAVQRRVAE 115 (336)
T ss_dssp CEEEECSSCCSCHHHHHHHHHHHHH
T ss_pred CcEEEeCCCCCCHHHHHHHHHHHHH
Confidence 3588999999999999999987765
No 33
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=64.64 E-value=4.5 Score=34.40 Aligned_cols=102 Identities=14% Similarity=0.210 Sum_probs=55.5
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecC---
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEE--- 81 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~--- 81 (196)
.-|++|||++.+++.+++|.+...+. .-.+-+.| +---+.++.+..+--+.. + ..|.+|+..+.-.
T Consensus 91 k~vl~EKP~~~~~~~~~~l~~~a~~~---~~~~~v~~~~R~~p~~~~~k~~i~~g~-i------G~i~~v~~~~~~~~~~ 160 (354)
T 3db2_A 91 KHIYVEKPISVSLDHAQRIDQVIKET---GVKFLCGHSSRRLGALRKMKEMIDTKE-I------GEVSSIEAVFSNERGL 160 (354)
T ss_dssp CEEEEESSSCSSHHHHHHHHHHHHHH---CCCEEEECGGGGSHHHHHHHHHHHTTT-T------CCEEEEEEEEECSGGG
T ss_pred CEEEEccCCCCCHHHHHHHHHHHHHc---CCeEEEeechhcCHHHHHHHHHHhcCC-C------CCeEEEEEEEEeccCc
Confidence 46999999999999999998877653 23334443 233344554444322222 1 1233444443211
Q ss_pred -CCc-c-ccc-cccccchhHHHHHHHHHHHHHHHhcCCCCCC
Q 041398 82 -MGV-Q-SGR-YFDGYGIIRDIVHSHILQTIALLAMEPPISL 119 (196)
Q Consensus 82 -~gv-~-R~~-yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~ 119 (196)
..- . |+. -++.-|++.|+. -|.+-++..+. .+|.+.
T Consensus 161 ~~~~~~w~~~~~~~ggG~l~d~g-~H~ld~~~~l~-G~~~~V 200 (354)
T 3db2_A 161 ELKKGNWRGEPATAPGGPLTQLG-VHQIDNLQFLL-GPVARV 200 (354)
T ss_dssp TCCTTCGGGCTTTSTTTHHHHTH-HHHHHHHHHHH-CCEEEE
T ss_pred ccccCCCccccccCCCceeccch-hHHHHHHHHHh-CCCeEE
Confidence 110 1 222 123457999975 47777766555 446544
No 34
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=64.58 E-value=4.4 Score=34.76 Aligned_cols=100 Identities=12% Similarity=0.005 Sum_probs=55.4
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccc-cccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCC
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLY-RIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMG 83 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~-RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~g 83 (196)
.-|++|||++.+++.|++|.+...+. ...+ .+.| +---+.++.+..+--++. +. .|.+|+....-.
T Consensus 112 k~Vl~EKPla~~~~e~~~l~~~a~~~---g~~~~~v~~~~R~~p~~~~~k~~i~~g~-iG------~i~~v~~~~~~~-- 179 (357)
T 3ec7_A 112 KYVFCEKPLAVTAADCQRVIEAEQKN---GKRMVQIGFMRRYDKGYVQLKNIIDSGE-IG------QPLMVHGRHYNA-- 179 (357)
T ss_dssp CEEEEESSSCSSHHHHHHHHHHHHHH---TSCCEEEECGGGGSHHHHHHHHHHHHTT-TC------SEEEEEEEEECS--
T ss_pred CCEEeecCccCCHHHHHHHHHHHHHh---CCeEEEEeecccCCHHHHHHHHHHhcCC-CC------CeEEEEEEEeCC--
Confidence 57999999999999999999876642 1112 3333 222344444444332222 11 122333332211
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHhcCCCCCC
Q 041398 84 VQSGRYFDGYGIIRDIVHSHILQTIALLAMEPPISL 119 (196)
Q Consensus 84 v~R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~ 119 (196)
.....|..-|++-|+.- |.+-++..+.=++|.+.
T Consensus 180 -~~p~~w~ggg~l~d~g~-H~iDl~~~l~G~~~~~V 213 (357)
T 3ec7_A 180 -STVPEYKTPQAIYETLI-HEIDVMHWLLNEDYKTV 213 (357)
T ss_dssp -CCCTTCCTTHHHHTTHH-HHHHHHHHHHTCCEEEE
T ss_pred -CCCccccCCchhhhccc-HHHHHHHHHcCCCceEE
Confidence 11223556788888644 77787777765556543
No 35
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=64.40 E-value=5.1 Score=33.82 Aligned_cols=102 Identities=12% Similarity=0.108 Sum_probs=57.9
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
..|++|||++.+++.+++|.+...+. .-.+.+.| +---+.++.+..+--+.. + ..|.+|++..... +.
T Consensus 90 k~v~~EKP~~~~~~~~~~l~~~a~~~---g~~~~v~~~~r~~p~~~~~k~~i~~g~-i------G~i~~v~~~~~~~-~~ 158 (344)
T 3euw_A 90 IPALCEKPIDLDIEMVRACKEKIGDG---ASKVMLGFNRRFDPSFAAINARVANQE-I------GNLEQLVIISRDP-AP 158 (344)
T ss_dssp CCEEECSCSCSCHHHHHHHHHHHGGG---GGGEEECCGGGGCHHHHHHHHHHHTTT-T------SSEEEEEEEEECS-SC
T ss_pred CcEEEECCCCCCHHHHHHHHHHHHhc---CCeEEecchhhcCHHHHHHHHHHhcCC-C------CceEEEEEEecCC-CC
Confidence 46999999999999999999877652 23444444 223344444444322222 1 1234445444322 11
Q ss_pred ccccccc-ccchhHHHHHHHHHHHHHHHhcCCCCCCC
Q 041398 85 QSGRYFD-GYGIIRDIVHSHILQTIALLAMEPPISLN 120 (196)
Q Consensus 85 ~R~~yyd-~~G~iRDmvQNHLlQlL~lvaMe~P~s~~ 120 (196)
....|+. .-|++.|+. -|.+-++..+.= +|.+..
T Consensus 159 ~~~~~~~~~gG~l~d~g-~H~ld~~~~l~G-~~~~v~ 193 (344)
T 3euw_A 159 APKDYIAGSGGIFRDMT-IHDLDMARFFVP-NIVEVT 193 (344)
T ss_dssp CCHHHHHHSCHHHHHTH-HHHHHHHHHHCS-CEEEEE
T ss_pred CCcccccCCCceeecch-hhHHHHHHHhcC-CcEEEE
Confidence 1223332 457888865 577787766554 776654
No 36
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=63.50 E-value=4.8 Score=34.59 Aligned_cols=104 Identities=11% Similarity=-0.007 Sum_probs=57.7
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.+++|.+...+. .-.+.+-| +---+.++.+..+--++. + -.|.+|+..+.-...
T Consensus 93 khVl~EKPla~~~~e~~~l~~~a~~~---g~~~~v~~~~R~~p~~~~~k~~i~~g~-i------G~i~~~~~~~~~~~~- 161 (359)
T 3m2t_A 93 VNVFVEKPPCATLEELETLIDAARRS---DVVSGVGMNFKFARPVRQLREMTQVDE-F------GETLHIQLNHYANKP- 161 (359)
T ss_dssp CEEEECSCSCSSHHHHHHHHHHHHHH---TCCEEECCHHHHCHHHHHHHHHHTSGG-G------CCEEEEEEEEECCCC-
T ss_pred CeEEEECCCcCCHHHHHHHHHHHHHc---CCEEEEEecccCcHHHHHHHHHHHCCC-C------CCeEEEEEEEecCCC-
Confidence 46899999999999999999877652 23334443 222244444443322221 1 123444444432111
Q ss_pred cccc-cccc--cchhHHHHHHHHHHHHHHHhcCCCCCCCh
Q 041398 85 QSGR-YFDG--YGIIRDIVHSHILQTIALLAMEPPISLNG 121 (196)
Q Consensus 85 ~R~~-yyd~--~G~iRDmvQNHLlQlL~lvaMe~P~s~~~ 121 (196)
.+.. +|+. -|++.|+ --|.+-++..+.=.+|.+..+
T Consensus 162 ~~~~w~~~~~~gg~l~d~-~~H~iD~~~~l~G~~~~~V~a 200 (359)
T 3m2t_A 162 RAPLWGLDSTLRSFLLAQ-AIHTIDLAITFGDGELRRVQS 200 (359)
T ss_dssp SSCCTTCSCHHHHHHHHT-HHHHHHHHHHHHCSCEEEEEE
T ss_pred CCCCcccCCCccchhhhc-ccHHHHHHHHHhCCCceEEEE
Confidence 1222 3343 4788885 457778777766557765544
No 37
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=63.14 E-value=4.9 Score=35.38 Aligned_cols=105 Identities=17% Similarity=0.156 Sum_probs=60.9
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.|++|.+...+. ...+-+.| |-.-+.++.+..+--++. + -.|.+|++.+.-...-
T Consensus 135 khVl~EKPla~~~~ea~~l~~~a~~~---g~~~~v~~~~R~~p~~~~~k~~i~~G~-i------G~i~~v~~~~~~~~~~ 204 (417)
T 3v5n_A 135 IHVICDKPLTSTLADAKKLKKAADES---DALFVLTHNYTGYPMVRQAREMIENGD-I------GAVRLVQMEYPQDWLT 204 (417)
T ss_dssp CEEEEESSSCSSHHHHHHHHHHHHHC---SSCEEEECGGGGSHHHHHHHHHHHTTT-T------CSEEEEEEEEECCTTS
T ss_pred CeEEEECCCcCCHHHHHHHHHHHHHc---CCEEEEEecccCCHHHHHHHHHHhcCC-C------CCeEEEEEEEeccccc
Confidence 46999999999999999999877663 33445554 445566666655533322 2 2244555554322110
Q ss_pred -------c-cccc-ccc-----cchhHHHHHHHHHHHHHHHhcCCCCCCCh
Q 041398 85 -------Q-SGRY-FDG-----YGIIRDIVHSHILQTIALLAMEPPISLNG 121 (196)
Q Consensus 85 -------~-R~~y-yd~-----~G~iRDmvQNHLlQlL~lvaMe~P~s~~~ 121 (196)
. +..+ +|. .|++.|+- -|.+.++..+.=++|.+..+
T Consensus 205 ~~~~~~~~~~~~Wr~~~~~~G~gG~l~d~g-~H~lDl~~~l~G~~~~~V~a 254 (417)
T 3v5n_A 205 ENIEQSGQKQAAWRTDPARSGAGGSTGDIG-THAYNLGCFVSGLELEELAA 254 (417)
T ss_dssp CC--------------------CCHHHHTH-HHHHHHHHHHHCCCEEEEEE
T ss_pred CccccccCCCcCcccCHHHcCCccHHHHHH-HHHHHHHHHhcCCCceEEEE
Confidence 1 1121 221 48999974 58888887776546765543
No 38
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=62.73 E-value=5.4 Score=33.97 Aligned_cols=25 Identities=20% Similarity=0.298 Sum_probs=21.8
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLS 30 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~ 30 (196)
.-|++|||++.+++.+++|.+...+
T Consensus 96 k~V~~EKP~a~~~~e~~~l~~~a~~ 120 (362)
T 1ydw_A 96 KHILLEKPVAMNVTEFDKIVDACEA 120 (362)
T ss_dssp CEEEECSSCSSSHHHHHHHHHHHHT
T ss_pred CeEEEecCCcCCHHHHHHHHHHHHH
Confidence 4688999999999999999987664
No 39
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=61.77 E-value=5.6 Score=33.28 Aligned_cols=25 Identities=20% Similarity=0.094 Sum_probs=22.0
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLS 30 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~ 30 (196)
.-|++|||++.+++.+++|.+...+
T Consensus 87 k~V~~EKP~~~~~~~~~~l~~~a~~ 111 (325)
T 2ho3_A 87 KHVILEKPAVSQPQEWFDLIQTAEK 111 (325)
T ss_dssp CEEEEESSCCSSHHHHHHHHHHHHH
T ss_pred CcEEEecCCcCCHHHHHHHHHHHHH
Confidence 4689999999999999999987765
No 40
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=61.21 E-value=9.5 Score=30.30 Aligned_cols=31 Identities=19% Similarity=0.228 Sum_probs=28.6
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCC--Ccc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQ--EKQ 36 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~--e~~ 36 (196)
.||.|+||=|-+++.|.+++..|...++ ++.
T Consensus 42 LrV~ID~~~gi~lddC~~vSr~is~~LD~~~~d 74 (164)
T 1ib8_A 42 LSIFVDKPEGITLNDTADLTEMISPVLDTIKPD 74 (164)
T ss_dssp EEEEEECSSCCCHHHHHHHHHHHGGGTTTCCSC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHhcccccc
Confidence 5999999999999999999999999999 543
No 41
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=60.98 E-value=6 Score=33.02 Aligned_cols=25 Identities=12% Similarity=0.169 Sum_probs=21.7
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLS 30 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~ 30 (196)
.-|++|||++.+++.+++|.+...+
T Consensus 90 ~~v~~eKP~~~~~~~~~~l~~~a~~ 114 (319)
T 1tlt_A 90 VHVCVDKPLAENLRDAERLVELAAR 114 (319)
T ss_dssp CEEEEESSSCSSHHHHHHHHHHHHH
T ss_pred CeEEEeCCCCCCHHHHHHHHHHHHH
Confidence 3588999999999999999987665
No 42
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=60.93 E-value=5.8 Score=33.71 Aligned_cols=104 Identities=15% Similarity=0.045 Sum_probs=56.2
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCC-
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMG- 83 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~g- 83 (196)
.-|++|||++.+++.+++|.+...+. .-.+-+.| +---+.++.+..+--+.. + ..|.+|++.+.=.-.
T Consensus 100 k~v~~EKP~a~~~~~~~~l~~~a~~~---g~~~~v~~~~r~~p~~~~~k~~i~~g~-i------G~i~~v~~~~~~~~~~ 169 (354)
T 3q2i_A 100 FHVMTEKPMATRWEDGLEMVKAADKA---KKHLFVVKQNRRNATLQLLKRAMQEKR-F------GRIYMVNVNVFWTRPQ 169 (354)
T ss_dssp CEEEECSSSCSSHHHHHHHHHHHHHH---TCCEEECCGGGGSHHHHHHHHHHHTTT-T------CSEEEEEEEEECBCCH
T ss_pred CCEEEeCCCcCCHHHHHHHHHHHHHh---CCeEEEEEcccCCHHHHHHHHHHhcCC-C------CceEEEEEEEEEecCc
Confidence 57999999999999999998877652 22333333 223344444443322222 2 123444444321100
Q ss_pred ----c-c-ccccccccchhHHHHHHHHHHHHHHHhcCCCCCCCh
Q 041398 84 ----V-Q-SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNG 121 (196)
Q Consensus 84 ----v-~-R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~ 121 (196)
. . |+.+.-.-|++-|+.- |.+-++..+.= +|.+..+
T Consensus 170 ~~~~~~~w~~~~~~~gG~l~d~g~-H~ld~~~~l~G-~~~~v~a 211 (354)
T 3q2i_A 170 EYYDAAGWRGTWEFDGGAFMNQAS-HYVDLLDWLIG-PVESVQA 211 (354)
T ss_dssp HHHHTSTTTTCTTTTCCCCCCCTH-HHHHHHHHHHC-CEEEEEE
T ss_pred hhccccCccccccCCCchhhhhhh-HHHHHHHHhcC-CceEEEE
Confidence 0 1 3332223688888654 77777665553 7765543
No 43
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=60.75 E-value=5.9 Score=35.18 Aligned_cols=105 Identities=14% Similarity=0.141 Sum_probs=54.8
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCC-C
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEM-G 83 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~-g 83 (196)
.-|++|||++.+++.|++|.+...+. ..++.+.| +---+.++.+..+--+.. +. .|.+|++.+.-.. +
T Consensus 120 khVl~EKP~a~~~~e~~~l~~~a~~~---g~~~~v~~~~R~~p~~~~~k~~i~~G~-iG------~i~~v~~~~~~~~~~ 189 (438)
T 3btv_A 120 KYLFVEWALACSLDQAESIYKAAAER---GVQTIISLQGRKSPYILRAKELISQGY-IG------DINSIEIAGNGGWYG 189 (438)
T ss_dssp CEEEEESSCCSSHHHHHHHHHHHHTT---TCEEEEECGGGGCHHHHHHHHHHHTTT-TC------SEEEEEEEEECSSSS
T ss_pred eeEEecCcccCCHHHHHHHHHHHHHc---CCeEEEecccccCHHHHHHHHHHHcCC-CC------CcEEEEEEEccCccc
Confidence 56999999999999999999877652 33444443 222244444433321111 11 2344444432111 1
Q ss_pred c----ccccc-cc---ccchhHHHHHHHHHHHHHHHhcCCCCCCCh
Q 041398 84 V----QSGRY-FD---GYGIIRDIVHSHILQTIALLAMEPPISLNG 121 (196)
Q Consensus 84 v----~R~~y-yd---~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~ 121 (196)
- .+..| ++ .-|++-|+. -|.+-++..+.=.+|.+..+
T Consensus 190 ~~~~~~~~~w~~~~~~gGG~l~d~g-~H~lDl~~~l~G~~~~~V~a 234 (438)
T 3btv_A 190 YERPVKSPKYIYEIGNGVDLVTTTF-GHTIDILQYMTSSYFSRINA 234 (438)
T ss_dssp SEEETTSCGGGGSTTSSCSTTTTHH-HHHHHHHHHHHTCCEEEEEE
T ss_pred ccccCCccccccccccCCCeeeeee-eeHHHHHHHHhCCCceEEEE
Confidence 0 01122 22 237888855 46666666555445655433
No 44
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=60.06 E-value=6 Score=34.25 Aligned_cols=105 Identities=13% Similarity=0.157 Sum_probs=55.0
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||+..+++.+++|.+...+. ...+.+-| +-.-+.++.+-.+--++. +.. |..|+....-...-
T Consensus 89 k~Vl~EKP~a~~~~e~~~l~~~a~~~---g~~~~v~~~~R~~p~~~~~k~~i~~g~-iG~------i~~~~~~~~~~~~~ 158 (387)
T 3moi_A 89 LHIIVEKPLTLSRDEADRMIEAVERA---GVHLVVGTSRSHDPVVRTLRAIVQEGS-VGR------VSMLNCFNYTDFLY 158 (387)
T ss_dssp CEEEECSCCCSCHHHHHHHHHHHHHH---TCCEEECCCGGGSHHHHHHHHHHHHCT-TCC------EEEEEEEEECCGGG
T ss_pred CceeeeCCccCCHHHHHHHHHHHHHh---CCeEEEEeccccCHHHHHHHHHHhcCC-CCC------eEEEEEEecccccc
Confidence 46899999999999999999877653 12223333 112234444433322222 111 22222221111100
Q ss_pred -c-cccccc---ccchhHHHHHHHHHHHHHHHhcCCCCCCCh
Q 041398 85 -Q-SGRYFD---GYGIIRDIVHSHILQTIALLAMEPPISLNG 121 (196)
Q Consensus 85 -~-R~~yyd---~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~ 121 (196)
. |...++ .-|++.|+.- |.+.++..+.-++|.+..+
T Consensus 159 ~~~~~~~~~~~~ggG~l~d~g~-H~id~~~~l~g~~~~~V~a 199 (387)
T 3moi_A 159 RPRRPEELDTSKGGGIIYNQLP-HQIDSIKTITGQRITAVRA 199 (387)
T ss_dssp SCCCGGGGCGGGTCSHHHHTHH-HHHHHHHHHHCCCEEEEEE
T ss_pred CCCChhhcccccCCcchhhhHH-HHHHHHHHHhCCCceEEEE
Confidence 1 222222 3499999864 7777777666557765543
No 45
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=59.79 E-value=6.3 Score=33.34 Aligned_cols=103 Identities=10% Similarity=0.041 Sum_probs=57.1
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.+++|.+...+. .-.+-+.| +---+.++.+..+--+.. + ..|.+|++...-...
T Consensus 89 k~v~~EKP~~~~~~e~~~l~~~a~~~---g~~~~v~~~~R~~p~~~~~k~~i~~G~-i------G~i~~~~~~~~~~~~- 157 (344)
T 3ezy_A 89 KHVFCEKPLSLNLADVDRMIEETKKA---DVILFTGFNRRFDRNFKKLKEAVENGT-I------GKPHVLRITSRDPAP- 157 (344)
T ss_dssp CEEEEESCSCSCHHHHHHHHHHHHHH---TCCEEEECGGGGCHHHHHHHHHHHTTT-T------SSEEEEEEEEECSSC-
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHh---CCcEEEeecccCCHHHHHHHHHHHcCC-C------CCeEEEEEEeeCCCC-
Confidence 46899999999999999999877653 22333443 222344444444322221 1 123344444321111
Q ss_pred cccccc-cccchhHHHHHHHHHHHHHHHhcCCCCCCC
Q 041398 85 QSGRYF-DGYGIIRDIVHSHILQTIALLAMEPPISLN 120 (196)
Q Consensus 85 ~R~~yy-d~~G~iRDmvQNHLlQlL~lvaMe~P~s~~ 120 (196)
....|. ..-|++.|+. -|.+-++..+.=.+|.+..
T Consensus 158 ~~~~~~~~~GG~l~d~g-~H~lDl~~~l~G~~~~~V~ 193 (344)
T 3ezy_A 158 PPLDYIRVSGGIFLDMT-IHDFDMARYIMGEEVEEVF 193 (344)
T ss_dssp CCHHHHHTTTCHHHHTH-HHHHHHHHHHHSSCEEEEE
T ss_pred CCcccccCCCceEeccc-chHHHHHHHHcCCCCeEEE
Confidence 011121 2348999975 5888877766554776544
No 46
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=56.91 E-value=7.6 Score=32.35 Aligned_cols=105 Identities=14% Similarity=0.145 Sum_probs=57.6
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.+++|.+...+. .-.+.+.| +---+.++.+..+--++ .+. .|.+|++.+.-...-
T Consensus 87 k~v~~ekP~~~~~~~~~~l~~~a~~~---g~~~~~~~~~r~~p~~~~~~~~i~~g-~iG------~i~~v~~~~~~~~~~ 156 (332)
T 2glx_A 87 KHVLCEKPLAMTLEDAREMVVAAREA---GVVLGTNHHLRNAAAHRAMRDAIAEG-RIG------RPIAARVFHAVYLPP 156 (332)
T ss_dssp CEEEECSSSCSSHHHHHHHHHHHHHH---TCCEEECCCGGGSHHHHHHHHHHHTT-TTS------SEEEEEEEEECBCCG
T ss_pred CeEEEeCCCcCCHHHHHHHHHHHHHc---CCEEEEeehhhcCHHHHHHHHHHHcC-CCC------CeEEEEEEEcccCCC
Confidence 45889999999999999999877642 22233333 22334455544332222 121 245555554433211
Q ss_pred ccccc-cc----ccchhHHHHHHHHHHHHHHHhcCCCCCCCh
Q 041398 85 QSGRY-FD----GYGIIRDIVHSHILQTIALLAMEPPISLNG 121 (196)
Q Consensus 85 ~R~~y-yd----~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~ 121 (196)
.+..+ ++ ..|++.|+. -|.+-++..+.=.+|.+..+
T Consensus 157 ~~~~w~~~~~~~ggG~l~d~g-~H~id~~~~l~G~~~~~V~a 197 (332)
T 2glx_A 157 HLQGWRLERPEAGGGVILDIT-VHDADTLRFVLNDDPAEAVA 197 (332)
T ss_dssp GGTTGGGSCTTTTCSHHHHTH-HHHHHHHHHHHTSCEEEEEE
T ss_pred CCCCcccccCCCCCchHhhhh-HHHHHHHHHHcCCCCcEEEE
Confidence 12222 22 358999964 57777766665436765443
No 47
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=56.66 E-value=7.6 Score=35.18 Aligned_cols=104 Identities=15% Similarity=0.104 Sum_probs=55.9
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCc-ccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCC-
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEK-QLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEM- 82 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~-~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~- 82 (196)
.-|++|||++.+++.|++|.+...+. . ..+-+-| +---+.++.+..+--++. +. .|.+|++.+.-..
T Consensus 139 khVl~EKPla~~~~ea~~l~~~a~~~---g~~~~~v~~~~R~~p~~~~~k~~i~~G~-iG------~i~~v~~~~~~~~~ 208 (479)
T 2nvw_A 139 RYLYVEWALAASVQQAEELYSISQQR---ANLQTIICLQGRKSPYIVRAKELISEGC-IG------DINSIEISGNGGWY 208 (479)
T ss_dssp CEEEEESSSSSSHHHHHHHHHHHHTC---TTCEEEEECGGGGCHHHHHHHHHHHTTT-TC------SEEEEEEEEECSBS
T ss_pred eeEEEeCCCcCCHHHHHHHHHHHHHc---CCeEEEEEeccccCHHHHHHHHHHHcCC-CC------CeEEEEEEecCCcc
Confidence 45899999999999999999877653 2 3444444 223344444444322221 11 2444444432111
Q ss_pred Cc----ccccc-cc---ccchhHHHHHHHHHHHHHHHhcCCCCCCC
Q 041398 83 GV----QSGRY-FD---GYGIIRDIVHSHILQTIALLAMEPPISLN 120 (196)
Q Consensus 83 gv----~R~~y-yd---~~G~iRDmvQNHLlQlL~lvaMe~P~s~~ 120 (196)
+- .+..| +| ..|++.|+. -|.+-++..+.=.+|.+..
T Consensus 209 ~~~~~~~~~~w~~~~~~gGG~l~d~g-~H~lDl~~~l~G~~p~~V~ 253 (479)
T 2nvw_A 209 GYERPMRSPEYLYDIESGVNLISNSF-GHTIDVLQYITGSYFQKIN 253 (479)
T ss_dssp SSEEETTCCGGGGCGGGSCSTTTTHH-HHHHHHHHHHHTCCEEEEE
T ss_pred CCcccccccccccCcccCccHHHHHH-HHHHHHHHHHHCCCCCEEE
Confidence 00 01122 22 247898865 5666766666544665543
No 48
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=56.23 E-value=8 Score=32.25 Aligned_cols=25 Identities=20% Similarity=0.347 Sum_probs=21.8
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLS 30 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~ 30 (196)
.-|++|||++.+++.+++|.+...+
T Consensus 94 k~v~~eKP~~~~~~~~~~l~~~a~~ 118 (315)
T 3c1a_A 94 KAVLVEKPLTLDLAEAEAVAAAAKA 118 (315)
T ss_dssp CEEEEESSSCSCHHHHHHHHHHHHH
T ss_pred CcEEEcCCCcCCHHHHHHHHHHHHH
Confidence 4688999999999999999987765
No 49
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=54.77 E-value=8.7 Score=32.15 Aligned_cols=24 Identities=17% Similarity=0.137 Sum_probs=21.2
Q ss_pred EEEeccCCCCChHHHHHHHHHHhc
Q 041398 7 RIIIEKPFGFDALCSHWLTKALLS 30 (196)
Q Consensus 7 RiviEKPFG~dl~Sa~~L~~~l~~ 30 (196)
-|++|||++.+++.+++|.+...+
T Consensus 89 ~V~~EKP~~~~~~~~~~l~~~a~~ 112 (323)
T 1xea_A 89 PTFVDKPLAASAQECENLYELAEK 112 (323)
T ss_dssp CEEEESCSCSSHHHHHHHHHHHHH
T ss_pred eEEEeCCCcCCHHHHHHHHHHHHh
Confidence 488999999999999999987665
No 50
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=53.00 E-value=8.9 Score=33.95 Aligned_cols=25 Identities=8% Similarity=-0.213 Sum_probs=22.1
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLS 30 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~ 30 (196)
.-|++|||+..+++.|++|.+...+
T Consensus 116 khV~~EKP~a~~~~ea~~l~~~a~~ 140 (444)
T 2ixa_A 116 KIVGMEVSGAITLEECWDYVKVSEQ 140 (444)
T ss_dssp CEEEECCCCCSSHHHHHHHHHHHHH
T ss_pred CeEEEeCCCcCCHHHHHHHHHHHHH
Confidence 4689999999999999999987765
No 51
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=52.80 E-value=9 Score=33.97 Aligned_cols=105 Identities=18% Similarity=0.105 Sum_probs=57.5
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCc
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGV 84 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv 84 (196)
.-|++|||++.+++.+++|.+...+. ..++-+-| +---+.++.+..+--+. .+. .|.+|++.+.-..+.
T Consensus 175 k~Vl~EKPla~~~~e~~~l~~~a~~~---g~~~~v~~~~R~~p~~~~~k~~i~~G-~iG------~i~~v~~~~~~~~~~ 244 (433)
T 1h6d_A 175 KHVMCEKPMATSVADCQRMIDAAKAA---NKKLMIGYRCHYDPMNRAAVKLIREN-QLG------KLGMVTTDNSDVMDQ 244 (433)
T ss_dssp CEEEECSSCCSSHHHHHHHHHHHHHH---TCCEEECCGGGGCHHHHHHHHHHHTT-SSC------SEEEEEEEEECCCCT
T ss_pred CcEEEcCCCCCCHHHHHHHHHHHHHh---CCeEEEEechhcCHHHHHHHHHHHcC-CCC------CcEEEEEEEeccccc
Confidence 35899999999999999999877653 22333332 22233444444332222 122 244555554332211
Q ss_pred -cc---ccccc---ccchhHHHHHHHHHHHHHHHhcCCCCCCCh
Q 041398 85 -QS---GRYFD---GYGIIRDIVHSHILQTIALLAMEPPISLNG 121 (196)
Q Consensus 85 -~R---~~yyd---~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~ 121 (196)
.. .++.. .-|++.|+.- |.+-++..+.=++|.+..+
T Consensus 245 ~~~~~~wr~~~~~~gGG~l~d~g~-H~lD~~~~l~G~~p~~V~a 287 (433)
T 1h6d_A 245 NDPAQQWRLRRELAGGGSLMDIGI-YGLNGTRYLLGEEPIEVRA 287 (433)
T ss_dssp TSHHHHGGGCHHHHSSSHHHHTHH-HHHHHHHHHHTSCEEEEEE
T ss_pred CCCCcccccccccCCCCceecccc-hHHHHHHHHcCCCCEEEEE
Confidence 11 22211 4689999754 7777777666545655433
No 52
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=37.24 E-value=33 Score=30.12 Aligned_cols=44 Identities=14% Similarity=0.020 Sum_probs=31.0
Q ss_pred eEEEeccCCCCChHHHHHHHHHHhccCCCcccccccc-cccHHHHHHHHH
Q 041398 6 NRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDH-LLGRNLIENLTV 54 (196)
Q Consensus 6 ~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDH-YLGKe~Vqnil~ 54 (196)
.-|++|||+ +++.|++|.+.-.+ -.-.|.|.| |-.-+.|+.++.
T Consensus 95 khVl~EKPl--~~~ea~~l~~~A~~---~g~~~~v~~~yr~~p~vr~~i~ 139 (372)
T 4gmf_A 95 VHVIQEHPL--HPDDISSLQTLAQE---QGCCYWINTFYPHTRAGRTWLR 139 (372)
T ss_dssp CEEEEESCC--CHHHHHHHHHHHHH---HTCCEEEECSGGGSHHHHHHHH
T ss_pred CcEEEecCC--CHHHHHHHHHHHHH---cCCEEEEcCcccCCHHHHHHHH
Confidence 469999997 77888888775544 345667766 667777777653
No 53
>1tz7_A 4-alpha-glucanotransferase; (beta, alpha)8- barrel; 2.15A {Aquifex aeolicus} SCOP: c.1.8.1
Probab=27.83 E-value=17 Score=33.91 Aligned_cols=24 Identities=25% Similarity=0.652 Sum_probs=18.0
Q ss_pred HHHHHHHhccCCCccccccccccc
Q 041398 22 HWLTKALLSKFQEKQLYRIDHLLG 45 (196)
Q Consensus 22 ~~L~~~l~~~f~e~~i~RIDHYLG 45 (196)
+-..+.|+..+.--.++||||++|
T Consensus 287 ~ww~~rlr~~~~~~d~lRIDH~~G 310 (505)
T 1tz7_A 287 RWWIRRVLHNLKLFDFLRLDHFRG 310 (505)
T ss_dssp HHHHHHHHHHHTTCSEEEETTGGG
T ss_pred HHHHHHHHHHHHHCCEEEecchHH
Confidence 344556666677777999999988
No 54
>3qoe_A Heterocyst differentiation protein; MCSG, PSI biology, structural genomics, midwest center for S genomics, helix-turn-helix; 3.00A {Fischerella thermalis} PDB: 3qod_A
Probab=25.88 E-value=17 Score=31.53 Aligned_cols=22 Identities=32% Similarity=0.688 Sum_probs=17.4
Q ss_pred ceeeeeeeeeCCCcCCCceEEEcC
Q 041398 166 TYFAAALYIDNASWDGVPFLIKAG 189 (196)
Q Consensus 166 Tfaa~~l~Idn~rW~gVPF~lrtG 189 (196)
.|+..+..||++ | |.|||..|-
T Consensus 194 ~ysgTVtridsp-w-GmPfYaLtr 215 (302)
T 3qoe_A 194 LYSGTVTRIDSP-W-GMPFYALTR 215 (302)
T ss_dssp TTTTSCCCBCCS-S-SCCEECCCC
T ss_pred hhccceEeecCC-C-CCcceeeec
Confidence 577778889987 6 999997653
No 55
>1x1n_A 4-alpha-glucanotransferase; disproportionating enzyme, amylomaltase, D-enzyme; 1.80A {Solanum tuberosum} SCOP: c.1.8.1
Probab=23.74 E-value=13 Score=34.87 Aligned_cols=22 Identities=23% Similarity=0.359 Sum_probs=15.0
Q ss_pred HHHHHhccCCCccccccccccc
Q 041398 24 LTKALLSKFQEKQLYRIDHLLG 45 (196)
Q Consensus 24 L~~~l~~~f~e~~i~RIDHYLG 45 (196)
..+.|+..+.--.++||||++|
T Consensus 304 w~~rlr~~~~~~d~lRIDH~~G 325 (524)
T 1x1n_A 304 WVRRIQRATDLFDEFRIDHFRG 325 (524)
T ss_dssp HHHHHHHHHHHCSEEEEETGGG
T ss_pred HHHHHHHHHHHCCEEEecchHh
Confidence 3344555555556999999988
No 56
>1esw_A Amylomaltase; (beta,alpha)8-barrel, glucanotransferase, alpha-amylase FAMI acarbose, transferase; HET: ACR; 1.90A {Thermus aquaticus} SCOP: c.1.8.1 PDB: 1cwy_A* 1fp8_A 1fp9_A 2owc_A* 2oww_A* 2owx_A* 2x1i_A*
Probab=22.99 E-value=16 Score=34.13 Aligned_cols=22 Identities=32% Similarity=0.443 Sum_probs=15.1
Q ss_pred HHHHHhccCCCccccccccccc
Q 041398 24 LTKALLSKFQEKQLYRIDHLLG 45 (196)
Q Consensus 24 L~~~l~~~f~e~~i~RIDHYLG 45 (196)
..+.|+..+.--.++||||++|
T Consensus 276 w~~rlr~~~~~~d~lRIDH~~G 297 (500)
T 1esw_A 276 WIRRLEKALELFHLVRIDHFRG 297 (500)
T ss_dssp HHHHHHHHHHHCSEEEEETGGG
T ss_pred HHHHHHHHHHHCCEEEecchHH
Confidence 3444555555556999999987
No 57
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=21.07 E-value=46 Score=27.94 Aligned_cols=51 Identities=6% Similarity=-0.278 Sum_probs=32.9
Q ss_pred eEEEeccCC-CCChHHHHHHHHHHhccCCCcccccccccccHHHHHHHHHHHhhcc
Q 041398 6 NRIIIEKPF-GFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNL 60 (196)
Q Consensus 6 ~RiviEKPF-G~dl~Sa~~L~~~l~~~f~e~~i~RIDHYLGKe~Vqnil~lRf~N~ 60 (196)
..|+.|||. |.+.+.+++|.+...+. ..++.|-| --.+.++.+..+-.++.
T Consensus 90 ~~Vi~ekP~~a~~~~~~~~l~~~a~~~---g~~~~v~~-~~~p~~~~~~~~i~~g~ 141 (304)
T 3bio_A 90 ICTADSFDIHDGILALRRSLGDAAGKS---GAAAVIAS-GWDPGSDSVVRTLMQAI 141 (304)
T ss_dssp CEEEECCCCGGGHHHHHHHHHHHHHHH---TCEEECSC-BBTTBHHHHHHHHHHHH
T ss_pred CeEEECCCCCCCCHHHHHHHHHHHHhC---CCEEEEeC-CCCHHHHHHHHHHHCCC
Confidence 478899997 99999999999877653 22444554 23344555555444443
No 58
>1nnx_A Protein YGIW; structural genomics, hypothetical protein, OB-fold, structure 2 function project, S2F, unknown function; 1.45A {Escherichia coli} SCOP: b.40.10.1
Probab=20.73 E-value=34 Score=25.68 Aligned_cols=16 Identities=31% Similarity=0.717 Sum_probs=14.4
Q ss_pred eeeeeeeCCCcCCCce
Q 041398 169 AAALYIDNASWDGVPF 184 (196)
Q Consensus 169 a~~l~Idn~rW~gVPF 184 (196)
.+.+.||+..|.|.|.
T Consensus 63 ~I~VeId~~~w~g~~v 78 (109)
T 1nnx_A 63 TINVDIDHKRWNGVTV 78 (109)
T ss_dssp EEEEECCGGGSTTCCC
T ss_pred cEEEEEChhhcCCccc
Confidence 5899999999999885
No 59
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=20.68 E-value=60 Score=25.78 Aligned_cols=21 Identities=10% Similarity=-0.013 Sum_probs=17.2
Q ss_pred eEEEeccCC-CCChHHHHHHHH
Q 041398 6 NRIIIEKPF-GFDALCSHWLTK 26 (196)
Q Consensus 6 ~RiviEKPF-G~dl~Sa~~L~~ 26 (196)
.-++||+|| +.+..|+..|-+
T Consensus 65 d~vaiE~~F~~~n~~sal~lgq 86 (166)
T 4ep4_A 65 EAVAVEEQFFYRQNELAYKVGW 86 (166)
T ss_dssp SEEEEECCCCSSCSHHHHHHHH
T ss_pred CEEEEeehhhccChHHHHHHHH
Confidence 368999999 789999877655
No 60
>1vf6_A PALS-1, PALS1-associated tight junction protein; L27 domain, heterodimer, four-helical bundle, coiled-coil, hydrophobic packing interactions; 2.10A {Homo sapiens} SCOP: a.194.1.1
Probab=20.58 E-value=35 Score=24.87 Aligned_cols=21 Identities=14% Similarity=0.351 Sum_probs=17.3
Q ss_pred cccchhHHHHHHHHH-HHHHHH
Q 041398 91 DGYGIIRDIVHSHIL-QTIALL 111 (196)
Q Consensus 91 d~~G~iRDmvQNHLl-QlL~lv 111 (196)
|+-+.+|+|+|.=|+ |||+|=
T Consensus 26 ekLs~lk~~LqSPLF~qILtlQ 47 (83)
T 1vf6_A 26 EKLSMFYETLKSPLFNQILTLQ 47 (83)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHH
T ss_pred hHHHHHHHHHhCHHHHHHHHHH
Confidence 567899999999887 778764
Done!