BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041400
(95 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6GKX7|GASAC_ARATH Gibberellin-regulated protein 12 OS=Arabidopsis thaliana GN=GASA12
PE=3 SV=1
Length = 106
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 71/102 (69%), Gaps = 15/102 (14%)
Query: 9 IALVLFLSVVFAVEVANA---------------GGEGSLKPEQCASACNYRCSATSHRNP 53
I + + S++FA + +N GGEGSLKPE+C AC YRCSATSHR P
Sbjct: 5 IVVFVISSLLFATQFSNGDELESQAQAPAIHKNGGEGSLKPEECPKACEYRCSATSHRKP 64
Query: 54 CIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
C+ FCN CC KCLCVPSGTYGHKEECPCYNNW TKEG PKCP
Sbjct: 65 CLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 106
>sp|P47926|RSI1_SOLLC Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1
Length = 96
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 1 MARLSWSSIALVLFLSVVFAVEVANA-GGEGSLKPEQCASACNYRCSATSHRNPCIEFCN 59
MA+ +++ L+L + + +N G L+P C C YRCSATSH+ PC+ FC
Sbjct: 1 MAKSGYNASFLLLISMFLILLTFSNVVEGYNKLRPTDCKPRCTYRCSATSHKKPCMFFCQ 60
Query: 60 MCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
CC CLCVP G YG+K+ CPCYNNWKT+EG PKCP
Sbjct: 61 KCCATCLCVPKGVYGNKQSCPCYNNWKTQEGKPKCP 96
>sp|P27057|GAST1_SOLLC Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1
Length = 112
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 51/67 (76%)
Query: 29 EGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTK 88
EG L P+ C C YRCS TS++ PC+ FC CC KCLCVP+GTYG+K+ CPCYNNWKTK
Sbjct: 46 EGRLHPQDCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTK 105
Query: 89 EGTPKCP 95
G PKCP
Sbjct: 106 RGGPKCP 112
>sp|Q6NMQ7|GASA6_ARATH Gibberellin-regulated protein 6 OS=Arabidopsis thaliana GN=GASA6
PE=3 SV=1
Length = 101
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 60/101 (59%), Gaps = 6/101 (5%)
Query: 1 MARLSWSSIALVLFLSVVFAVEVANAG------GEGSLKPEQCASACNYRCSATSHRNPC 54
MA+L S + L + + V A G GSLK QC C RCS T + PC
Sbjct: 1 MAKLITSFLLLTILFTFVCLTMSKEAEYHPESYGPGSLKSYQCGGQCTRRCSNTKYHKPC 60
Query: 55 IEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
+ FC CC KCLCVP GTYG+K+ CPCYNNWKT++G PKCP
Sbjct: 61 MFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101
>sp|P46690|GASA4_ARATH Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4
PE=1 SV=2
Length = 106
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 58/93 (62%), Gaps = 6/93 (6%)
Query: 9 IALVLFLSVVFAVEVANAG------GEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCC 62
I L + ++V A +N G GSLK QC S C+ RC T + CI FCN CC
Sbjct: 14 IVLFMLQTMVMASSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCC 73
Query: 63 KKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
+KCLCVP G YG+K+ C CYNNWKT+EG PKCP
Sbjct: 74 RKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106
>sp|Q84J95|GASA5_ARATH Gibberellin-regulated protein 5 OS=Arabidopsis thaliana GN=GASA5
PE=2 SV=1
Length = 97
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Query: 16 SVVFAVEVANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGH 75
SV V+ A GG+ LKP+QC S C++RCSATSH+ PC+ FC CCKKCLCVP GT+G+
Sbjct: 20 SVSNLVQAARGGGK--LKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGN 77
Query: 76 KEECPCYNNWKTKEGTPKCP 95
K+ CPCYNNWKTKEG PKCP
Sbjct: 78 KQTCPCYNNWKTKEGRPKCP 97
>sp|O80641|GASA8_ARATH Gibberellin-regulated protein 8 OS=Arabidopsis thaliana
GN=At2g39540 PE=2 SV=1
Length = 87
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%)
Query: 9 IALVLFLSVVFAVEVANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCV 68
+ LV+ + ++ + ++ S C CN RCS C+++CN+CC+KC CV
Sbjct: 1 MKLVVVQFFIISLLLTSSFSVLSSADSSCGGKCNVRCSKAGQHEECLKYCNICCQKCNCV 60
Query: 69 PSGTYGHKEECPCYNNWKTKEGTPKCP 95
PSGT+GHK+ECPCY + K +G KCP
Sbjct: 61 PSGTFGHKDECPCYRDMKNSKGGSKCP 87
>sp|Q8LFM2|GASAA_ARATH Gibberellin-regulated protein 10 OS=Arabidopsis thaliana
GN=GASA10 PE=2 SV=1
Length = 89
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 9/88 (10%)
Query: 9 IALVLFLSVVFAVEVANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKC-LC 67
I +L S +F + A++ C CN RCS ++ C+++CN+CC+KC C
Sbjct: 10 IISLLITSSLFILSTADS--------SPCGGKCNVRCSKAGRQDRCLKYCNICCEKCNYC 61
Query: 68 VPSGTYGHKEECPCYNNWKTKEGTPKCP 95
VPSGTYG+K+ECPCY + K +GT KCP
Sbjct: 62 VPSGTYGNKDECPCYRDMKNSKGTSKCP 89
>sp|P86888|PMLN_PRUPE Peamaclein OS=Prunus persica PE=1 SV=1
Length = 63
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 37 CASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
C S C RCS ++ C+++C +CC+KC CVPSGTYG+K+ECPCY + K +G PKCP
Sbjct: 5 CDSKCGVRCSKAGYQERCLKYCGICCEKCHCVPSGTYGNKDECPCYRDLKNSKGNPKCP 63
>sp|A8MR46|GASAD_ARATH Gibberellin-regulated protein 13 OS=Arabidopsis thaliana GN=GASA13
PE=3 SV=1
Length = 103
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 64/99 (64%), Gaps = 4/99 (4%)
Query: 1 MARLSWSSIALVLFLS--VVFAVEV-ANAGGEGSLKPE-QCASACNYRCSATSHRNPCIE 56
++ + +S + L L LS + F + V A + ++ P +C C RCS T ++ PC+
Sbjct: 5 LSIIVFSIVVLHLLLSAHMHFLINVCAECETKSAIPPLLECGPRCGDRCSNTQYKKPCLF 64
Query: 57 FCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
FCN CC KCLCVP GTYG+K+ CPCYNNWKTK G PKCP
Sbjct: 65 FCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103
>sp|O82328|GASA7_ARATH Gibberellin-regulated protein 7 OS=Arabidopsis thaliana GN=GASA7
PE=3 SV=1
Length = 108
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%)
Query: 20 AVEVANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEEC 79
AV A +G + C C RC ++ C+++C +CCK C CVPSGTYG+K EC
Sbjct: 33 AVAPAPQSKDGPALEKWCGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHEC 92
Query: 80 PCYNNWKTKEGTPKCP 95
CY + + +GTPKCP
Sbjct: 93 ACYRDKLSSKGTPKCP 108
>sp|Q948Z4|SNAK1_SOLTU Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1
Length = 88
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%)
Query: 37 CASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
C S C RCS + C+++C +CC++C CVPSGTYG+K ECPCY + K +G KCP
Sbjct: 30 CDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88
>sp|P46687|GASA3_ARATH Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3
PE=2 SV=1
Length = 99
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 18 VFAVEVANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKE 77
V A E + G EG +K + C C RCS +S N C+ CN CC +C CVP GT G+
Sbjct: 24 VHAAEDSQVG-EGVVKID-CGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHH 81
Query: 78 ECPCYNNWKTKEGTPKCP 95
CPCY + T+ G KCP
Sbjct: 82 LCPCYASITTRGGRLKCP 99
>sp|Q9LFR3|GASAE_ARATH Gibberellin-regulated protein 14 OS=Arabidopsis thaliana GN=GASA14
PE=1 SV=1
Length = 275
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 36 QCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEEC-PCYNNWKTKEGTPKC 94
C C RC S +N C+ C CC +C CVP GTYG+KE+C CY N KT+ G KC
Sbjct: 215 DCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKSKC 274
Query: 95 P 95
P
Sbjct: 275 P 275
>sp|Q8GWK5|GASA9_ARATH Gibberellin-regulated protein 9 OS=Arabidopsis thaliana GN=GASA9
PE=2 SV=1
Length = 119
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 32/59 (54%)
Query: 37 CASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
C AC RCS TS + C C CC KC CVP GT G+ CPCY + +T KCP
Sbjct: 61 CGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119
>sp|Q93X17|SNAK2_SOLTU Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1
Length = 104
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 32/65 (49%)
Query: 31 SLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEG 90
S K C AC RC +S C C CC +C CVP GT G+ E CPCY + T
Sbjct: 40 SYKKIDCGGACAARCRLSSRPRLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGN 99
Query: 91 TPKCP 95
KCP
Sbjct: 100 KRKCP 104
>sp|F4IQJ4|GASAB_ARATH Gibberellin-regulated protein 11 OS=Arabidopsis thaliana
GN=GASA11 PE=3 SV=1
Length = 94
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 33/60 (55%)
Query: 36 QCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
C S C RCS +S N C C CC +C CV GT G+ ++CPCY + T G KCP
Sbjct: 35 DCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94
>sp|P46689|GASA1_ARATH Gibberellin-regulated protein 1 OS=Arabidopsis thaliana GN=GASA1
PE=2 SV=2
Length = 98
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 34/67 (50%)
Query: 29 EGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTK 88
G K C SAC RC + C C CC +C CVP GTYG+ ++C CY + T
Sbjct: 32 NGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTH 91
Query: 89 EGTPKCP 95
G KCP
Sbjct: 92 GGRRKCP 98
>sp|P46688|GASA2_ARATH Gibberellin-regulated protein 2 OS=Arabidopsis thaliana GN=GASA2
PE=2 SV=1
Length = 99
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 18 VFAVEVANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKE 77
V A + A G EG +K + C C RCS +S C+ CN CC +C CVP GT G+
Sbjct: 24 VHAADGAKVG-EGVVKID-CGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTH 81
Query: 78 ECPCYNNWKTKEGTPKCP 95
CPCY + T G KCP
Sbjct: 82 LCPCYASITTHGGRLKCP 99
>sp|Q6FVJ1|RTC1_CANGA Restriction of telomere capping protein 1 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RTC1 PE=3 SV=1
Length = 1336
Score = 32.3 bits (72), Expect = 0.83, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 43 YRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
+ C A S N CN +K L + + GH+ C+ W EG +CP
Sbjct: 1277 WYCQACSRTNTLCVVCNTPLRK-LTMAALKCGHEGHFECFTQWFITEGMSECP 1328
>sp|O65312|MEDEA_ARATH Histone-lysine N-methyltransferase MEDEA OS=Arabidopsis thaliana
GN=MEA PE=1 SV=1
Length = 689
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 6/54 (11%)
Query: 34 PEQCASACNYRCSATSHRNPCIEFCNMCCKKCL-----CVPSGTYGHKEECPCY 82
P C S C +C +H N C ++C C K C C + +CPC+
Sbjct: 449 PCTCKSKCGQQCPCLTHENCCEKYCG-CSKDCNNRFGGCNCAIGQCTNRQCPCF 501
>sp|A3GIA4|RTC1_PICST Restriction of telomere capping protein 1 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=RTC1 PE=3 SV=2
Length = 1105
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 28/73 (38%)
Query: 23 VANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCY 82
+ N + LK + A + C S + +CN CK V S GH+ C
Sbjct: 1025 LVNEKSKEKLKNDVNADFGYWYCDECSQKQSNCIYCNEPCKGLTVVVSLKCGHRGHFGCL 1084
Query: 83 NNWKTKEGTPKCP 95
W ++ +CP
Sbjct: 1085 REWFIEDENNECP 1097
>sp|P80012|VWF_BOVIN von Willebrand factor (Fragment) OS=Bos taurus GN=VWF PE=1 SV=2
Length = 937
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Query: 35 EQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVP------SGTYGHKEECPCYNN 84
+QC + CN C + SH P E +C + C C P +G+ K +CPCY +
Sbjct: 658 QQCGTPCNLTCRSLSH--PDEECTEVCLEGCFCPPGLFLDETGSCVPKAQCPCYYD 711
>sp|A5E6M3|RTC1_LODEL Restriction of telomere capping protein 1 OS=Lodderomyces
elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /
NBRC 1676 / NRRL YB-4239) GN=RTC1 PE=3 SV=1
Length = 1163
Score = 29.3 bits (64), Expect = 7.1, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 19/53 (35%)
Query: 43 YRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
+ C R FCN CK + S GH+ C W E +CP
Sbjct: 1102 WYCDECLQRQLNCVFCNEPCKGLVVAISLKCGHRGHFGCLKEWFIDEQNVECP 1154
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.133 0.469
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,009,967
Number of Sequences: 539616
Number of extensions: 1336961
Number of successful extensions: 3501
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 3421
Number of HSP's gapped (non-prelim): 176
length of query: 95
length of database: 191,569,459
effective HSP length: 65
effective length of query: 30
effective length of database: 156,494,419
effective search space: 4694832570
effective search space used: 4694832570
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)