Your job contains 1 sequence.
>041408
MSQRIYDYRILLPFCKTNEQNLLLFLSKLLIKLLLSESRSRTHKQKPQQQHIIILSLLFQ
MDDHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLP
KDLDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDIWKPELQTKTLI
QLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSEYMKL
SAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQIFQNI
IRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTELIL
GILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICKFSGNFNFVVQ
EMSRV
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041408
(425 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 709 5.5e-70 1
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 431 1.6e-40 1
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 409 3.4e-38 1
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 382 2.4e-35 1
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 318 1.5e-28 1
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 311 8.2e-28 1
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 274 2.0e-22 1
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 272 4.4e-22 1
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 176 1.3e-19 2
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 241 4.2e-18 1
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 246 4.4e-18 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 235 7.5e-17 1
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 232 1.7e-16 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 226 7.4e-16 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 204 2.9e-15 2
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 217 7.3e-15 1
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 187 1.2e-14 2
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 212 2.8e-14 1
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 180 1.0e-13 2
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 202 1.1e-13 1
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 182 4.2e-13 2
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 144 1.2e-12 2
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 197 1.5e-12 1
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 174 1.9e-12 2
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 187 2.3e-11 1
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 179 8.6e-11 1
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 181 9.8e-11 1
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 175 2.1e-10 1
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 175 2.2e-10 1
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 173 2.8e-10 1
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 153 9.4e-10 2
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 170 1.2e-09 1
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 170 1.6e-09 2
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 167 1.7e-09 2
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 159 5.2e-09 1
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 165 6.0e-09 1
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 150 6.3e-09 2
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 162 7.2e-09 1
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 161 8.8e-09 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 161 8.8e-09 1
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 161 2.0e-08 1
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 156 3.2e-08 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 154 5.4e-08 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 154 5.4e-08 1
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 108 6.0e-08 2
UNIPROTKB|Q0DR28 - symbol:PUB57 "U-box domain-containing ... 154 6.2e-08 1
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 153 6.9e-08 1
TAIR|locus:2176177 - symbol:AT5G51270 species:3702 "Arabi... 156 7.4e-08 1
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 159 1.3e-07 2
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 153 1.5e-07 1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 155 1.9e-07 2
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 148 2.1e-07 1
UNIPROTKB|H3BTA3 - symbol:STUB1 "E3 ubiquitin-protein lig... 126 2.2e-07 1
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 146 2.6e-07 2
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 145 4.8e-07 1
WB|WBGene00000500 - symbol:chn-1 species:6239 "Caenorhabd... 140 5.1e-07 1
TAIR|locus:2047605 - symbol:AT2G19410 species:3702 "Arabi... 148 5.4e-07 1
TAIR|locus:2151641 - symbol:AT5G61560 species:3702 "Arabi... 146 8.9e-07 1
UNIPROTKB|F1P105 - symbol:STUB1 "STIP1 homology and U box... 136 1.2e-06 1
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 143 2.0e-06 1
ZFIN|ZDB-GENE-030131-2963 - symbol:stub1 "STIP1 homology ... 135 2.4e-06 1
UNIPROTKB|Q5ZHY5 - symbol:STUB1 "STIP1 homology and U box... 134 4.0e-06 1
UNIPROTKB|J9NRV4 - symbol:STUB1 "Uncharacterized protein"... 130 4.4e-06 1
DICTYBASE|DDB_G0293212 - symbol:DDB_G0293212 species:4468... 138 7.3e-06 1
UNIPROTKB|F1MUH4 - symbol:STUB1 "Uncharacterized protein"... 130 1.0e-05 1
UNIPROTKB|Q9UNE7 - symbol:STUB1 "E3 ubiquitin-protein lig... 130 1.0e-05 1
UNIPROTKB|F1RG35 - symbol:STUB1 "Uncharacterized protein"... 130 1.0e-05 1
MGI|MGI:1891731 - symbol:Stub1 "STIP1 homology and U-Box ... 130 1.0e-05 1
RGD|1306167 - symbol:Stub1 "STIP1 homology and U-box cont... 130 1.0e-05 1
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 95 1.1e-05 2
UNIPROTKB|E1B7G3 - symbol:STUB1 "Uncharacterized protein"... 130 1.2e-05 1
TAIR|locus:2050669 - symbol:AT2G45910 species:3702 "Arabi... 136 1.2e-05 1
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 129 2.0e-05 1
FB|FBgn0027052 - symbol:CHIP "CHIP" species:7227 "Drosoph... 122 7.5e-05 1
POMBASE|SPAC20H4.10 - symbol:ufd2 "ubiquitin-protein liga... 124 0.00031 1
TAIR|locus:2079716 - symbol:CHIP "carboxyl terminus of HS... 116 0.00033 1
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 156/354 (44%), Positives = 229/354 (64%)
Query: 65 QDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLD 124
++IEIP +F+CPISL+IMKDPV TGITYDR+SIE WLF G N+ CPVTKQ + D D
Sbjct: 8 EEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNS-CPVTKQDIT-DAD 65
Query: 125 LTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDIWKP-ELQTKTLIQLE 183
LTPNHTLRRLIQ+WC N++YG++RIPTP+ P+ K +I KLI+D E Q K L +L
Sbjct: 66 LTPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLR 125
Query: 184 VFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGL-EGALSILHFFKITSEYMK--L 240
+EN N++C+ AGVP L IV+ +N G L + AL++L+ + + +K L
Sbjct: 126 QIVSENATNKRCLEAAGVPE-FLANIVSNDSEN--GSLTDEALNLLYHLETSETVLKNLL 182
Query: 241 SAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQIFQNI 300
+ + + IV+S T ++ E + +A +LKNI++ A LKP++F +
Sbjct: 183 NNKKDNNIVKSLTKIMQ------RGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEV 236
Query: 301 IRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIEL---ELTASEKKTTE 357
+++L R I+Q+ AA+ ++++ CP GRNR VE+G + +IEL E SE++ E
Sbjct: 237 VQILDDR-ISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPE 295
Query: 358 LILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICKF 411
+ + +L LC CA+GRA+FL+H AAIAVV K+I++VS A DRA+ +L + +F
Sbjct: 296 MAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRF 349
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 85/151 (56%), Positives = 105/151 (69%)
Query: 65 QDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLD 124
Q+IEIP +F+CPISL IMKDPV TGITYDRESIE WLF G N+ CPVTKQ + + D
Sbjct: 3 QEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNS-CPVTKQVIT-ETD 60
Query: 125 LTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDIWKPEL-QTKTLIQLE 183
LTPNHTLRRLIQ+WC N++YGI+RIPTPK P+ K +I KLIK+ L Q K L +L
Sbjct: 61 LTPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLR 120
Query: 184 VFAAENERNRKCMAEAGVPRAMLTYIVNCCD 214
+EN N++C+ A VP + + N D
Sbjct: 121 QIVSENTTNKRCLEAAEVPEFLANIVSNSVD 151
Score = 262 (97.3 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 91/357 (25%), Positives = 178/357 (49%)
Query: 75 CPISLQIMKDPVTAITGITYDRESIEHWL-FQGNNNAE-CPVTKQPLPK-DLD-LTPNHT 130
CP++ Q++ + T +T R I+ W + E P K P+ K +++ L +
Sbjct: 49 CPVTKQVITE--TDLTPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESS 106
Query: 131 LRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDIWKPELQTKTLIQLEVFAAENE 190
L Q C + T K L ++ + + +I + T + + +
Sbjct: 107 SSHLNQVKCLKRLRQIVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSL--SSSN 164
Query: 191 RNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSEYMK--LSAFEIDKI 248
N C + ML N D ++ ++ ALS+L+ + +K L+ + +
Sbjct: 165 LNDMCQSN------MLE---NRFDSSR-SLMDEALSVLYHLDTSETALKSLLNNKKGTNL 214
Query: 249 VESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQIFQNIIRVLKQRV 308
V++ T ++ I E +++A +LK +++ A + L+ ++F +I++L +
Sbjct: 215 VKTLTKIM---QRGIY---ESRAYAALLLKKLLEVADPMQIILLERELFGEVIQILHDQ- 267
Query: 309 IAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIEL---ELTASEKKTTELILGILFH 365
I+ + +A+++++ CP GRNR VE G + +IEL + +SE++ +E+ + +L
Sbjct: 268 ISHKATRSAMQILVITCPWGRNRHKAVEGGTISMIIELLMDDTFSSERRNSEMAMVVLDM 327
Query: 366 LCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICKFSGNFNFVVQEM 422
LC CA+GRA+FL+H AAIAVV+K+I++VS +RA+ +L + +F + ++QEM
Sbjct: 328 LCQCAEGRAEFLNHGAAIAVVSKKILRVSQITSERAVRVLLSVGRFCATPS-LLQEM 383
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 110/351 (31%), Positives = 176/351 (50%)
Query: 67 IEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLT 126
I+IP +F CPISL++M+DPVT TG TYDR SIE W+ GNN CPVT+ PL D L
Sbjct: 12 IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTT-CPVTRAPL-SDFTLI 69
Query: 127 PNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKD---IWKPELQTKT----L 179
PNHTLRRLIQ WC N + G++RIPTPK P + L+ I + ++ L
Sbjct: 70 PNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAAL 129
Query: 180 IQLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSEYMK 239
+L FA ++++NR +A ++ + + +++ + +L++L IT
Sbjct: 130 RRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSEL--VSESLALLVMLPITEPNQF 187
Query: 240 LSAFEIDKIVESFTWVLALDDESIENHKEIKSHAL-RILKNIIQAASSKFLQRLKPQIFQ 298
+S VE T +L D SIE + + AL I+ ++A K +F+
Sbjct: 188 VSISSDPGRVEFLTRLLF--DSSIETR--VNAAALIEIVSTGTKSADLKGSISNSESVFE 243
Query: 299 NIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTEL 358
++ +L+ + +++ + +K + C R I + +GA LI+ ++ TE
Sbjct: 244 GVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTER 303
Query: 359 ILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLIC 409
L + LC +G A F H + ++ K I++VS A + A L +C
Sbjct: 304 ALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALC 354
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 105/355 (29%), Positives = 176/355 (49%)
Query: 67 IEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLT 126
I+IP +F CPISL +M DPVT TG TYDR SI+ W+ GN CPVT+ L D L
Sbjct: 12 IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTT--CPVTRVAL-SDFTLI 68
Query: 127 PNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKD---IWKPELQTKT----L 179
PNHTLRRLIQ WC N + G++RIPTPK P + + L+ I + ++ +
Sbjct: 69 PNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAI 128
Query: 180 IQLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGG--LEGALSILHFFKITSEY 237
+L A ++E+NR +A ++ + + + + +L++L +T
Sbjct: 129 RRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLVLLHMTETE 188
Query: 238 MKLSAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRL---KP 294
+ A + ++ F L L D SIE I+ +A +++ ++ A S L+ +
Sbjct: 189 CEAVASDPSRV--GFMTRL-LFDSSIE----IRVNAAALIEMVLTGAKSMDLKLIISGSD 241
Query: 295 QIFQNIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKK 354
IF+ ++ +LK + +++ + +K + C + R + + +GA LI+ ++
Sbjct: 242 SIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRC 301
Query: 355 TTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLIC 409
TE L + LC +G A F H + ++ K I++VS A + A L +C
Sbjct: 302 DTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALC 356
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 99/376 (26%), Positives = 180/376 (47%)
Query: 60 QMDDHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPL 119
+ + +I IP F CPIS+ +MKDPV TGITYDR SIE W+ GN CPVT L
Sbjct: 22 ESEPESEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKT--CPVTNTVL 79
Query: 120 PKDLDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDIW----KPELQ 175
D PNHT+R++IQ WC + + I RIPTP+ PL ++ ++ + + + + +
Sbjct: 80 TT-FDQIPNHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYE 138
Query: 176 TKTLI--QLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKI 233
+I +++ E+E+NRKC+ E V + +C DK G E +L+
Sbjct: 139 KCGVIIEKIKKLGDESEKNRKCVNENSVGWVLC----DCFDK--FSGDEKLTFMLNEILS 192
Query: 234 TSEYMKLSAFE-IDKIVE--SFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQ 290
+M E I K+ SF V L + ++ ++ +A I+K I+ ++
Sbjct: 193 LLTWMFPIGLEGISKLASATSFRCVAGLLKSTDDS---VRQNAAFIMKEILSLDETRVHS 249
Query: 291 -RLKPQIFQNIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELT 349
++ + + ++++++ V + ++ + + +E G V +E+ +
Sbjct: 250 FAVENGVAEALVKLIRDSVSSSSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMIVD 309
Query: 350 ASEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLIC 409
A E E L +L +C GR + + + ++ K+I +VS A ++ ++ +
Sbjct: 310 A-ENSVCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLW 368
Query: 410 KFSGNFNFVVQEMSRV 425
K +GN V++ R+
Sbjct: 369 K-TGN-TVAVEDAVRL 382
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 112/377 (29%), Positives = 187/377 (49%)
Query: 66 DIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDL 125
+I IP F CPIS ++MKDPV +GITYDRE+IE W G CPVT L L+
Sbjct: 30 EITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQT--CPVTNTVLTS-LEQ 86
Query: 126 TPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDIWKPELQTKTLIQLEV- 184
PNHT+RR+IQ WC + GI+RIPTP+ P++ Q+ ++ + + + +E+
Sbjct: 87 IPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMV 146
Query: 185 -----FAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGL--EGALSILHFF-KITSE 236
E+ERNRKC+ E G +L + +N L E +S+L + I E
Sbjct: 147 TKMTRLGKESERNRKCVKENGAG-LVLCVCFDAFSENANASLLLEETVSVLTWMLPIGLE 205
Query: 237 -YMKLSAFE-IDKIVESFTWVLALDDES----IENHKEIK-SHALRILK-NIIQAASSKF 288
KL+ +++VE +L D++ I+ E+ +H + K N +Q A K
Sbjct: 206 GQSKLTTTSSFNRLVE----LLRNGDQNAAFLIKELLELNVTHVHALTKINGVQEAFMKS 261
Query: 289 LQRLKPQIFQNIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELEL 348
+ R + ++I + + Q+ ++ L+L L N I VE L++ E
Sbjct: 262 INRDSTCV-NSLISIHHMILTNQETVSRFLELDLV------N--ITVEM-----LVDSEN 307
Query: 349 TASEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLI 408
+ EK T +L ++ C +GR + ++ I ++ K+I+++S D + ++ +
Sbjct: 308 SVCEKALT--VLNVI---CETKEGREKVRRNKLVIPILVKKILKISEKKD--LVSVMWKV 360
Query: 409 CKFSGNFNFVVQEMSRV 425
CK SG+ + V+E R+
Sbjct: 361 CK-SGDGS-EVEEALRL 375
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 274 (101.5 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 104/356 (29%), Positives = 167/356 (46%)
Query: 62 DDHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPK 121
DD +P +F CPISL +MK PV+ TG+TYDR SI+ WL GNN CP T Q L +
Sbjct: 4 DDLYITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNT--CPATMQIL-Q 60
Query: 122 DLDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDIWKPELQTKTLIQ 181
+ + PN TL RLI W +D+ D +P++ I + ++ E ++ I
Sbjct: 61 NKEFVPNLTLHRLIDHW-SDSINRRADS-ESPESDTPTRDEINAAIERFRIENDARSKI- 117
Query: 182 LEVFAAENERNRKCMAEAGVPRAMLTYIV----NCCDKNQVGGLEG-ALSILHFFKITS- 235
L FA E++ NR+ +A AML ++ N D + L G A+ IL +
Sbjct: 118 LR-FARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLL--LVGEAVKILSMIRRKIF 174
Query: 236 EYMKLSAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQ 295
+ +LS + + T L N K +K +L+ I A SK +
Sbjct: 175 DRRRLSNLILTNGGDCLTSFFLLIKRG--NPK-LKIDCSAVLEFIAVDAESKLIIAKGEG 231
Query: 296 IFQNIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELT--ASEK 353
+ II+++ + I A L L++ S R ++ ++ V +L L LT +
Sbjct: 232 LVTEIIKLISSDSDSSL-IEANLSLLIAIASSKRVKLALIREKLVTKLTSL-LTDPTTSV 289
Query: 354 KTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLIC 409
TE L +L + SC +GR++ + + V ++M+VS AA + A+ +L +C
Sbjct: 290 SVTEKCLKLLEAISSCKEGRSE-ICDGVCVETVVNKLMKVSTAATEHAVTVLWSVC 344
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 272 (100.8 bits), Expect = 4.4e-22, P = 4.4e-22
Identities = 94/350 (26%), Positives = 165/350 (47%)
Query: 67 IEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLT 126
I +P +F CPISL +M+ PV+ TG+TYDR SI+ WL GNN CP T Q L K D
Sbjct: 10 ITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNT--CPATMQLL-KTKDFV 66
Query: 127 PNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDIWKPELQT-KTLIQLEVF 185
PN TL+RLI W P P + K ++ L + + L+++ F
Sbjct: 67 PNLTLQRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERLMSLENLMKIVRF 126
Query: 186 AAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSEYMKLSAFEI 245
+++ NR+ +++ ML I+ K ++ + A+ IL K+ E +
Sbjct: 127 VKDSDSNREFLSKKMEFVPMLVDIIRT-KKTKIELVIMAIRILDSIKVDRERLSNLMLAN 185
Query: 246 DKIVESFTWVL-ALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQIFQNIIRVL 304
D + T +L A+ ++E+ K ++R+L I A SK + + + +++ +
Sbjct: 186 DG-GDCLTAILLAIQRGNLES----KIESVRVLDWISFDAKSKLMIAERDGVLTEMMKSI 240
Query: 305 KQRVIAQQG-INAALKLMLDACPSGRNRMIMVESGAVFELIELELTAS--EKKTTELILG 361
+ I A+L ++ S R R ++ + A+ ++ ++ LT + TE L
Sbjct: 241 SITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNVAVTEKSLK 300
Query: 362 ILFHLCSCADGRAQFLS--HRAAIAVVTKRIMQVSPAADDRAILILSLIC 409
+L L S +GR + + + V K++++VS A + A+ IL +C
Sbjct: 301 LLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLC 350
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 176 (67.0 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 38/71 (53%), Positives = 45/71 (63%)
Query: 68 EIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTP 127
EIP FICPISL+ M+DPVT TG TY+R +I W G+ CP T Q L DL +TP
Sbjct: 59 EIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGH--CTCPTTMQELWDDL-VTP 115
Query: 128 NHTLRRLIQAW 138
N TL +LI W
Sbjct: 116 NKTLHQLIYTW 126
Score = 128 (50.1 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 65/289 (22%), Positives = 132/289 (45%)
Query: 125 LTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDIWKPELQTKTLIQL-E 183
+TPN TL +LI W + Y + + + ++I+ ++ K + + L +L +
Sbjct: 113 VTPNKTLHQLIYTWFSQK--YVLMKKRSEDVQGRAIEILGTLRKA-KGKAKVHALSELKQ 169
Query: 184 VFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSEYMKLSAF 243
V A + + E GV +++ +++ + VG E A++IL ++ S+ K
Sbjct: 170 VVMAHAIAKKTVVDEGGV--FVISSLLSPFTSHAVGS-E-AIAILVNLELDSD-SKAGLM 224
Query: 244 EIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQIFQNIIRV 303
+ ++ V L+D SIE K + R++ +++ + + ++R+
Sbjct: 225 QPARVS---LMVDMLNDGSIET----KINCARLIGRLVEEKGFRAELVSSHSLLVGLMRL 277
Query: 304 LKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTELILGIL 363
+K R + G++ AL L+ + R ++V GAV +L+++ L + + E L +L
Sbjct: 278 VKDRR-RRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDV-LPCLDVECLESALFVL 335
Query: 364 FHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICKFS 412
LC ++GR I + +M+VS + AI IL +CK +
Sbjct: 336 DSLCLESEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCKLA 384
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 241 (89.9 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 93/353 (26%), Positives = 159/353 (45%)
Query: 67 IEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLT 126
I +P +F CPISL +MK PV+ TG+TYDR SI+ WL GNN CP T Q L ++ D
Sbjct: 8 ITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNT--CPATMQIL-QNKDFI 64
Query: 127 PNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSK--LQIIKLIKDIWKPELQTKTLIQLEV 184
PN TL+RLI+ W AP I +K I K E + ++ V
Sbjct: 65 PNRTLQRLIEIWSDSVRRRTCVESAELAAPTRDEIADAIDRVK-IEKEERDDREVLSKIV 123
Query: 185 -FAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGG-----LEGALSILHFFKI-TSEY 237
F E++ NR +A +L ++N D ++ A+ IL + S+
Sbjct: 124 RFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILSTIRSKVSDR 183
Query: 238 MKLSAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQIF 297
+ S + + + ++ L + E+K +L+ I A SK L + +
Sbjct: 184 RRFSNLILTNGRDRLSVIVYLFKTG---NVELKIDCAGLLEFIAVDAESKLLIAERDGLI 240
Query: 298 QNIIR-VLKQRVIAQQGINAALKLMLDACPSGRNRMIMVES---GAVFELIELELTASEK 353
+++ + K ++ I ++L ++ R ++ ++ G V +L+ ++
Sbjct: 241 TELMKSISKDSDLSL--IESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSLSV 298
Query: 354 KTTELILGILFHLCSCADGRAQFLSHRA-AIAVVTKRIMQVSPAADDRAILIL 405
TE L +L L S +GR++ + V K++M+VS AA + A+ +L
Sbjct: 299 SVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAATEHAVTVL 351
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 246 (91.7 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 63/176 (35%), Positives = 89/176 (50%)
Query: 63 DHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKD 122
D + I IP+ F CPISL++MKDPV TG TY+R IE W+ G++ CP T+Q +
Sbjct: 267 DSRPITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHT--CPTTQQKMSTS 324
Query: 123 LDLTPNHTLRRLIQAWCADNSAYGIDRI-----PTPKAPLS-KLQIIKLIKDIWKP--EL 174
LTPN+ LR LI WC N R PTP S + I L+ + P E
Sbjct: 325 A-LTPNYVLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEE 383
Query: 175 QTKTLIQLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSI-LH 229
Q +L + A N NR C+AEAG +L+ + + + Q + L++ +H
Sbjct: 384 QRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIH 439
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 235 (87.8 bits), Expect = 7.5e-17, P = 7.5e-17
Identities = 87/312 (27%), Positives = 150/312 (48%)
Query: 69 IPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPN 128
+P F+CPI+L+IM DPV TG TY++ESI+ W G+ CP T+Q L L L PN
Sbjct: 290 LPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKT--CPKTRQELDH-LSLAPN 346
Query: 129 HTLRRLIQAWCADNSAYGIDRIPTPKAPLS-KLQIIKLIKDIWKPEL--QTKTLIQLEVF 185
L+ LI WC N+ ++ +P + K ++ L++ + +L Q +++ Q+ +
Sbjct: 347 FALKNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLL 406
Query: 186 AAENERNRKCMAEAG-VPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSEYMKLSAFE 244
A EN NR +A AG +P +L +++ D G E A++ L + LS E
Sbjct: 407 ARENPENRVLIANAGAIP--LLVQLLSYPDS---GIQENAVTTL---------LNLSIDE 452
Query: 245 IDKIVESFTWVLALDDESIEN-HKEIKSHALRILKNIIQAASSKFLQRLKPQIFQNIIRV 303
++K + S + E +EN ++E + ++ L ++ +K L I ++ +
Sbjct: 453 VNKKLISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNGI-PPLVDL 511
Query: 304 LKQRVIA--QQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTELILG 361
L+ + + + A L L++ GR +++G V L+ L L + L
Sbjct: 512 LQHGTLRGKKDALTALFNLSLNSANKGR----AIDAGIVQPLLNL-LKDKNLGMIDEALS 566
Query: 362 ILFHLCSCADGR 373
IL L S +GR
Sbjct: 567 ILLLLASHPEGR 578
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 232 (86.7 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 86/299 (28%), Positives = 134/299 (44%)
Query: 66 DIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDL 125
D IP F CPI+L++M+DPV TG TYDRESI+ W+ G+N CP T Q L K L
Sbjct: 271 DANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNT--CPKTGQVL-KHTSL 327
Query: 126 TPNHTLRRLIQAWCADNSA----YGI---DRIPTPKA-PLSKLQIIKLIKDIWKPELQTK 177
PN L+ LI WC D YG + P +A +K+ + LI+ + +
Sbjct: 328 VPNRALKNLIVLWCRDQKIPFELYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVAD-SNG 386
Query: 178 TLIQLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSEY 237
+ +L A + R C+AEAG ++ Y+ C Q+ + L++ I E
Sbjct: 387 VVFELRALAKSDTVARACIAEAGAIPKLVRYLATECPSLQINAVTTILNL----SIL-EQ 441
Query: 238 MKLSAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRL--KPQ 295
K E D + VL E K++A L ++ A S + +RL K +
Sbjct: 442 NKTRIMETDGALNGVIEVLRSGATW-----EAKANAAATLFSL--AGVSAYRRRLGRKAR 494
Query: 296 IFQNIIRVLKQRVIAQQ--GINAALKLMLDACPSGR--NRMIMVESGAVFELIELELTA 350
+ ++ + KQ + + + A L L+ + GR +M +G F+ + E A
Sbjct: 495 VVSGLVDLAKQGPTSSKRDALVAILNLVAERENVGRFVEAGVMGAAGDAFQELPEEAVA 553
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 226 (84.6 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 99/359 (27%), Positives = 160/359 (44%)
Query: 64 HQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDL 123
H+ IPEYF CPISL++MKDPV TG TY+R SI+ WL G+ CP +++ L
Sbjct: 243 HRSPVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKT--CPKSQETL-LHA 299
Query: 124 DLTPNHTLRRLIQAWCADNSA-----YGIDRIP----TPKAPLSKLQIIKLIKDIWK--P 172
LTPN+ L+ LI WC N G R + + + ++ L++ +
Sbjct: 300 GLTPNYVLKSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTT 359
Query: 173 ELQTKTLIQLEVFAAENERNRKCMAEAG-VPRAMLTYIVNCCD-KNQVGGLEGALSILHF 230
E Q +L + A N NR C+AEAG +P +L +++ D + Q + L++
Sbjct: 360 EQQRAAAGELRLLAKRNVDNRVCIAEAGAIP--LLVELLSSPDPRTQEHSVTALLNLS-- 415
Query: 231 FKITSEYMKLSAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQ 290
++ + A I IVE L + S+E + +A L ++ +K
Sbjct: 416 INEGNKGAIVDAGAITDIVE------VLKNGSME----ARENAAATLFSLSVIDENKVAI 465
Query: 291 RLKPQIFQNIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTA 350
I Q +I +L++ ++G A + + C N+ V+ G V L L A
Sbjct: 466 GAAGAI-QALISLLEEGT--RRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDA 522
Query: 351 SEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLIC 409
E L IL L + +G+ ++ +I V+ + I SP + A IL +C
Sbjct: 523 GGGMVDEA-LAILAILSTNQEGKTA-IAEAESIPVLVEIIRTGSPRNRENAAAILWYLC 579
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 204 (76.9 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 63/199 (31%), Positives = 91/199 (45%)
Query: 64 HQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDL 123
H+ IP+ F CPISL++M+DPV +G TY+R I+ WL G+ CP T+QPL
Sbjct: 223 HRSPIIPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKT--CPKTQQPL-SHT 279
Query: 124 DLTPNHTLRRLIQAWCA-------DNSAYGIDRIPTPKAPLSKLQIIKLIKDI--WKPEL 174
LTPN L+ LI WC N D+ + ++ L+ + +
Sbjct: 280 SLTPNFVLKSLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDE 339
Query: 175 QTKTLIQLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKIT 234
Q ++ + A N NR C+AEAG + +VN + E A++ L I
Sbjct: 340 QRAAAGEIRLLAKRNVNNRICIAEAGA----IPLLVNLLSSSDPRTQEHAVTALLNLSI- 394
Query: 235 SEYMKLSAFE---IDKIVE 250
E K S + I KIVE
Sbjct: 395 HENNKASIVDSHAIPKIVE 413
Score = 60 (26.2 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 26/88 (29%), Positives = 43/88 (48%)
Query: 314 INAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTELILGILFHLCSCADGR 373
I+ AL L+ + ++++ S + L+E+ T S + E IL+ LCS AD
Sbjct: 505 IDEALSLLSILAGNPEGKIVIARSEPIPPLVEVIKTGSPRNR-ENAAAILWLLCS-ADTE 562
Query: 374 AQFLSHRAAIAVVTKRIMQVSPAADDRA 401
Q L+ +AA V + ++S DRA
Sbjct: 563 -QTLAAKAA--GVEDALKELSETGTDRA 587
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 217 (81.4 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 85/350 (24%), Positives = 156/350 (44%)
Query: 67 IEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLT 126
+ IP F+CP+SL++MKDPV TG TY+R I+ W+ GN CP T+Q L ++ LT
Sbjct: 239 LTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGN--LTCPKTQQKL-ENFTLT 295
Query: 127 PNHTLRRLIQAWCADNS----AYGIDRIPTPKAPLSKLQIIKLIKDIWKPELQTKTLIQL 182
PN+ LR LI WCA+++ A I+ +S ++ + E + + ++
Sbjct: 296 PNYVLRSLISRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEI 355
Query: 183 EVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSEYMKLSA 242
+ + NR +AEAG + +VN V E A++ + + LS
Sbjct: 356 RSLSKRSTDNRILIAEAGA----IPVLVNLLTSEDVATQENAITCV---------LNLSI 402
Query: 243 FEIDKIVESFTWVLALDDESIE-NHKEIKSHALRILKNIIQAASSKFLQRLKPQIFQNII 301
+E +K + F + + + E + +A L ++ A +K + I ++
Sbjct: 403 YENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGGSGAI-PALV 461
Query: 302 RVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTELILG 361
+L+ +G A + + C N+ V +G V L+++ ++ + + L
Sbjct: 462 DLLENGT--PRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALT 519
Query: 362 ILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAAD-DRAILILSLICK 410
IL L + D ++ + A++ I+Q + + A IL +CK
Sbjct: 520 ILSVLANNQDAKSAIVKANTLPALIG--ILQTDQTRNRENAAAILLSLCK 567
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 187 (70.9 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 41/83 (49%), Positives = 52/83 (62%)
Query: 70 PEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNH 129
PE CPISLQ+M DPV +G TY+R IE W G+N+ CP T+Q LP L LTPN+
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNS--CPKTQQQLPH-LSLTPNY 332
Query: 130 TLRRLIQAWCADNSAYGIDRIPT 152
++ LI +WC N GI +PT
Sbjct: 333 CVKGLIASWCEQN---GIT-VPT 351
Score = 76 (31.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 51/228 (22%), Positives = 94/228 (41%)
Query: 186 AAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSEYMKLSAFEI 245
A N RN++ M +GV +L +++C +Q G AL Y+ LS E
Sbjct: 498 AVNNNRNKELMLTSGVI-PLLEKMISC---SQSQGPATAL-----------YLNLSCLEK 542
Query: 246 DK-IVESFTWVLALDDESIENHK-EIKSHALRILKNIIQAASSKFLQRLKPQIFQNIIRV 303
K ++ S V + +++ K + K AL L N+ S + + + NII+
Sbjct: 543 AKPVIGSSQAVSFFVNLLLQDTKTQCKLDALHALYNL-----STYSPNIPTLLSSNIIKS 597
Query: 304 LKQRVIAQQG----INAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTELI 359
L+ V+A G I +L ++L+ S + M+ + + + L + E
Sbjct: 598 LQ--VLASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDTVEQEQA 655
Query: 360 LGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSL 407
+ L LC+ ++ Q + I + + SP D++ +L L
Sbjct: 656 VSCLVILCTGSESCIQMVLQEGVIPSLVSISVNGSPRGRDKSQKLLML 703
Score = 62 (26.9 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 59/309 (19%), Positives = 124/309 (40%)
Query: 120 PKDLDLTP---NHTLRRLIQAWCADNSAYGID-RIPTPKAPLSKLQIIKLIKDIWKPELQ 175
PKD+ + P + T+ Q +N+ +D I + L I+ +D+ K +
Sbjct: 385 PKDIRVVPLEESSTIESERQQKEKNNAPDEVDSEINVLEGYQDILAIVDKEEDLAK---K 441
Query: 176 TKTLIQLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLE-GALSILHFFKIT 234
K + + + +NE R M G A L ++ + N E GA+++ + +
Sbjct: 442 CKVVENVRILLKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNL-AVN 500
Query: 235 SEYMKLSAFEIDKIVESFTWVLALDDESIE-NHKEIKSHALRILKNIIQAASSKFLQRLK 293
+ K + ++ S V+ L ++ I + + + AL + + ++ A
Sbjct: 501 NNRNK------ELMLTS--GVIPLLEKMISCSQSQGPATALYLNLSCLEKAKPVIGSSQA 552
Query: 294 PQIFQNIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEK 353
F N+ L Q Q ++A L + + N ++ S + L L T +
Sbjct: 553 VSFFVNL---LLQDTKTQCKLDA-LHALYNLSTYSPNIPTLLSSNIIKSLQVLASTGNHL 608
Query: 354 KTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICKFSG 413
E L +L +L S +G+ + ++ + I+ + + ++A+ L ++C S
Sbjct: 609 -WIEKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILCTGSE 667
Query: 414 N-FNFVVQE 421
+ V+QE
Sbjct: 668 SCIQMVLQE 676
Score = 41 (19.5 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 254 WVLALDDESIENHKEIKSHALRILKNI 280
W LA+ D N K + S L K+I
Sbjct: 362 WRLAMSDSESPNSKSVDSVGLCTPKDI 388
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 212 (79.7 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 96/366 (26%), Positives = 162/366 (44%)
Query: 62 DDHQ---DIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQP 118
DD Q ++ IPE F+CPISL++MKDP TG TY+R I+ W+ GN CP T+Q
Sbjct: 233 DDSQKSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGN--LSCPKTQQK 290
Query: 119 LPKDLDLTPNHTLRRLIQAWCADNS-----AYGIDRIPTPKAPLSKLQ-----IIKLIKD 168
L ++ LTPN+ LR LI WC ++ Y R L I L+
Sbjct: 291 L-ENFTLTPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCK 349
Query: 169 IWKPELQTK-TLI-QLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCD-KNQVGGLEGAL 225
+ ++ + T + ++ + + NR +AEAG ++ + + D + Q + L
Sbjct: 350 LSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCIL 409
Query: 226 SILHFFKITSEYMKLSAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAAS 285
+ L ++ E + L+ V S VL L S+E + +A L ++ A
Sbjct: 410 N-LSIYEHNKELIMLAG-----AVTSI--VLVLRAGSME----ARENAAATLFSLSLADE 457
Query: 286 SKFLQRLKPQIFQNIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIE 345
+K + I ++ +L+ + +G A + + C N+ V +G V L++
Sbjct: 458 NKIIIGASGAIMA-LVDLLQYGSV--RGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVK 514
Query: 346 LELTASEKKTTELILGILFHLCSCADGRAQFLSHRA-AIAVVTKRIMQVSPAADDRAILI 404
+ +S ++ + L IL L S + L RA AI + + + P + A I
Sbjct: 515 MLTDSSSERMADEALTILSVLASNQVAKTAIL--RANAIPPLIDCLQKDQPRNRENAAAI 572
Query: 405 LSLICK 410
L +CK
Sbjct: 573 LLCLCK 578
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 180 (68.4 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 36/73 (49%), Positives = 46/73 (63%)
Query: 70 PEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNH 129
PE CPISLQ+M DPV +G TY+R IE W G+N CP T+Q LP + LTPN+
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNT--CPKTQQQLPH-ISLTPNN 329
Query: 130 TLRRLIQAWCADN 142
++ LI +WC N
Sbjct: 330 CVKGLIASWCEQN 342
Score = 75 (31.5 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 45/252 (17%), Positives = 104/252 (41%)
Query: 173 ELQTKTLIQLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLE-GALSILHFF 231
E + K + ++ + ++E R M G A+L ++ + D N + GA+++ +
Sbjct: 439 EKKCKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLA 498
Query: 232 KITSEYMKLSAFE-IDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQ 290
+ +L + +++E S E+H + AL + + + A S
Sbjct: 499 VNNNRNKELMLTSGVIRLLEKMI-------SSAESHGS--ATALYLNLSCLDEAKSVIGS 549
Query: 291 RLKPQIFQNIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTA 350
Q ++++L++ + Q ++A L + + N ++ S + L L +
Sbjct: 550 S---QAVPFLVQLLQKEIETQCKLDA-LHALYNLSTYSPNIPALLSSNIIKSLQGLLAST 605
Query: 351 SEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICK 410
E E L +L +L S +G+ + +S + I+ + + ++A+ L ++C
Sbjct: 606 GENLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSCLLILCN 665
Query: 411 FSGN-FNFVVQE 421
+ V+QE
Sbjct: 666 GRESCIQMVLQE 677
Score = 66 (28.3 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 48/230 (20%), Positives = 94/230 (40%)
Query: 186 AAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSEYMKLSAFEI 245
A N RN++ M +GV R +L +++ + + G+ + L Y+ LS +
Sbjct: 498 AVNNNRNKELMLTSGVIR-LLEKMISSAESH------GSATAL--------YLNLSCLDE 542
Query: 246 DKIV----ESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQIFQNII 301
K V ++ +++ L + IE + K AL L N+ S + + + NII
Sbjct: 543 AKSVIGSSQAVPFLVQLLQKEIET--QCKLDALHALYNL-----STYSPNIPALLSSNII 595
Query: 302 RVLKQRVIAQQG----INAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTE 357
+ L Q ++A G I +L ++L+ S + V S + + L + E
Sbjct: 596 KSL-QGLLASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTEQE 654
Query: 358 LILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSL 407
+ L LC+ + Q + I + + +P +++ +L L
Sbjct: 655 QAVSCLLILCNGRESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLLML 704
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 202 (76.2 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 82/299 (27%), Positives = 134/299 (44%)
Query: 68 EIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTP 127
++P F CPISL+IM DPV +G T+DR SI+ W+ GN CP+TK PL + L P
Sbjct: 4 DLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRT--CPITKLPLSETPYLIP 61
Query: 128 NHTLRRLIQAWCADNSAYGIDRIPTPKA---PLSKLQIIKLIKDIWKPELQTKTLIQLEV 184
NH LR LI + A S R T + S+ I L+ + ++L +L
Sbjct: 62 NHALRSLILNF-AHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVR 120
Query: 185 FAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSEYMKLSAFE 244
+ R+ + E+G RA L + +C NQV E +LS+L ++ E
Sbjct: 121 LTKRDSSIRRKVTESGAVRAALDCVDSC---NQVLQ-EKSLSLL--LNLSLEDDNKVGLV 174
Query: 245 IDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQIFQNIIRVL 304
D ++ VL + + K+ A +L ++ +K P ++ +L
Sbjct: 175 ADGVIRRIVTVLRVGSP------DCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLL 228
Query: 305 KQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTELILGIL 363
+ ++ +A L + P R R+ V+ G+V L+E + E+ +LG+L
Sbjct: 229 RVGNDRERKESATALYALCSFPDNRKRV--VDCGSVPILVEAADSGLERAVE--VLGLL 283
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 182 (69.1 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 39/85 (45%), Positives = 49/85 (57%)
Query: 63 DHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKD 122
D +P+ F CPISL +M+DPV A TG TYDR SI W+ +G++ CP + Q L D
Sbjct: 291 DDTSFSVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHST--CPNSGQTLA-D 347
Query: 123 LDLTPNHTLRRLIQAWCADNSAYGI 147
L PN LR LI WC YG+
Sbjct: 348 HRLVPNRALRSLISQWCG---VYGL 369
Score = 66 (28.3 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 22/87 (25%), Positives = 41/87 (47%)
Query: 300 IIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTELI 359
I+ VL+ + NAA L + ++IM E GAV EL + + + + +
Sbjct: 488 IVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIMNEPGAVEELASMLTKGTSRGKKDAV 547
Query: 360 LGILFHLCSCADGRAQFLSHRAAIAVV 386
+ LF+L + + A+ L A +A++
Sbjct: 548 MA-LFNLSTHPESSARMLESCAVVALI 573
Score = 39 (18.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 22/130 (16%), Positives = 54/130 (41%)
Query: 280 IIQAASSKFLQRLKPQIFQNIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGA 339
+ + SS+ + ++R+L+ + + AA ++ L A +NR + + GA
Sbjct: 384 VAASCSSRAAMEANKATARILVRMLEDGSENVKAV-AAKEIRLLAKTGKQNRAFIADLGA 442
Query: 340 VFELIELELTASEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQ--VSPAA 397
+ L L L +++ E + L +L + + + + ++ + + A
Sbjct: 443 IPLLCRL-LLSNDWMAQENAVTALLNLSIFEPNKGRIMEQEGCLRLIVGVLQNGWTTEAK 501
Query: 398 DDRAILILSL 407
++ A + SL
Sbjct: 502 ENAAATLFSL 511
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 144 (55.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 32/80 (40%), Positives = 43/80 (53%)
Query: 63 DHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKD 122
D +E+P+ FIC +S IM +PV +G TY++ I WL + CP TKQ L
Sbjct: 66 DISPVEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWL---KHERTCPKTKQVLSHR 122
Query: 123 LDLTPNHTLRRLIQAWCADN 142
L + PNH + LI WC N
Sbjct: 123 LWI-PNHLISDLITQWCLVN 141
Score = 97 (39.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 51/208 (24%), Positives = 95/208 (45%)
Query: 221 LEGALSILHFFKITSEYMKLSAFEIDKIVESFTWVLA-LD--DESIENHKEIKSHALRIL 277
+E A + H T ++ + F + I +S T +L+ L DE++++ E++ + + L
Sbjct: 178 IEAAKELRHQ---TKKFPNVRVFFVAGIHDSITRLLSPLSTLDEAVDSSLELQENIVTAL 234
Query: 278 KNIIQAASSKFLQRLKPQIFQNIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVES 337
N+ S+K + + + + LKQ + AA L A S N++I+ S
Sbjct: 235 FNLSILESNKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDS--NKIIIGNS 292
Query: 338 GAVFELIELELTASEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAA 397
AV LI+L + + T+ +F+LC + + + +S I TK+I S
Sbjct: 293 EAVKALIDL-IEEGDLLATKEATSTVFNLCIVLENKGKVVS-AGLIHAATKKIKAGSNV- 349
Query: 398 DDRAILILSLICKFSGNFNFVVQEMSRV 425
D + +L+LI N V+EM ++
Sbjct: 350 -DELLSLLALI----STHNRAVEEMDKL 372
Score = 43 (20.2 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 262 SIENHKEI--KSHALRILKNIIQAASSKFLQRLKPQIFQNIIRVL--KQRVIAQQGINAA 317
+I+++K I S A++ L ++I+ + +F N+ VL K +V++ I+AA
Sbjct: 281 AIDSNKIIIGNSEAVKALIDLIEEGDLLATKEATSTVF-NLCIVLENKGKVVSAGLIHAA 339
Query: 318 LK-----------LMLDACPSGRNRMI--MVESGAVFELIELELTASEKKTTELILGILF 364
K L L A S NR + M + G +++L + S T E + I+F
Sbjct: 340 TKKIKAGSNVDELLSLLALISTHNRAVEEMDKLGFIYDLFSILRKPSSLLTGENAVVIVF 399
Query: 365 HL 366
++
Sbjct: 400 NM 401
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 197 (74.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 55/149 (36%), Positives = 78/149 (52%)
Query: 69 IPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPN 128
IP+ F CPISL++M+DPV +G TY+R IE W+ G++ CP T+Q L LTPN
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHST--CPKTQQALTSTT-LTPN 312
Query: 129 HTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKL--------IKDI-WK-----PEL 174
+ LR LI WC N I+ P P + L ++ I+D+ W+ PE
Sbjct: 313 YVLRSLIAQWCEAND---IEP-PKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPED 368
Query: 175 QTKTLIQLEVFAAENERNRKCMAEAG-VP 202
Q ++ + A N NR +AEAG +P
Sbjct: 369 QRSAAGEIRLLAKRNADNRVAIAEAGAIP 397
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 174 (66.3 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 38/82 (46%), Positives = 46/82 (56%)
Query: 70 PEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNH 129
PE CPISLQ+M DPV +G TY+R IE W G+N CP T Q L L LTPN+
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNT--CPKTHQQL-SHLCLTPNY 336
Query: 130 TLRRLIQAWCADNSAYGIDRIP 151
++ LI +WC N D P
Sbjct: 337 CVKALISSWCEQNGVQVPDGPP 358
Score = 69 (29.3 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 45/255 (17%), Positives = 109/255 (42%)
Query: 161 QIIKLIKDIWKPELQTKTLIQLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGG 220
+++ + D+ + + + Q+ V ++E R M E G A+L ++ + ++N
Sbjct: 425 ELLTTLTDVDTLRKKCRVVEQIRVLLKDDEEARILMGENGCVEALLQFLGSALNENNASA 484
Query: 221 LE-GALSILHFFKITSEYMKLSAFEIDKIVESFTWVLALDDESIEN-HKEIKSHALRILK 278
+ GA+++ F + + + +K + + ++ L +E + N H A+ +
Sbjct: 485 QKVGAMAL---FNLAVDNNR------NKELMLASGIIPLLEEMLCNPHSHGSVTAIYLNL 535
Query: 279 NIIQAASSKFLQRLKPQIFQNIIRVLKQRVIAQQGINAALKLM-LDACPSGRNRMIMVES 337
+ ++ A L N++ + Q ++A L L P N ++ +
Sbjct: 536 SCLEEAKPVIGSSLAVPFMVNLLWTETE---VQCKVDALHSLFHLSTYPP--NIPCLLSA 590
Query: 338 GAVFELIELELTASEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAA 397
V L L ++ E++ TE L +L +L G+ + +S + ++ + + P
Sbjct: 591 DLVNALQSLTIS-DEQRWTEKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGEPNE 649
Query: 398 DDRAILILSLICKFS 412
++A+ +L ++C S
Sbjct: 650 QEQAVSLLLILCNHS 664
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 187 (70.9 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 54/152 (35%), Positives = 75/152 (49%)
Query: 67 IEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLT 126
I +P+ F+CPISL +M DPV TG TYDR SI W+ +G+ CP T Q L D +
Sbjct: 303 ITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGH--CTCPKTGQML-MDSRIV 359
Query: 127 PNHTLRRLIQAWC-ADNSAYGID-----------RIPTPKA-PLSKLQIIKLIKDI--WK 171
PN L+ LI WC A +Y + +PT A +K + LIK +
Sbjct: 360 PNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADGS 419
Query: 172 PELQTKTLIQLEVFAAENERNRKCMAEAG-VP 202
QT ++ + A + NR +AEAG +P
Sbjct: 420 QAAQTVAAREIRLLAKTGKENRAYIAEAGAIP 451
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 179 (68.1 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 67 IEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLT 126
+ +P+ F+CPI+ ++MKDPV A G +Y++E++E+W+ NN P+T PLP L LT
Sbjct: 402 VAVPDEFLCPITRELMKDPVIAADGYSYEKEAMENWI--SNNRRSSPMTNLPLPS-LVLT 458
Query: 127 PNHTLRRLIQAW 138
PN TL+ I W
Sbjct: 459 PNRTLKMAISRW 470
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 181 (68.8 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 82/358 (22%), Positives = 156/358 (43%)
Query: 75 CPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNHTLRRL 134
CPISL+IM DPV +G TYDR SI W GN CP T + L + L N +++++
Sbjct: 284 CPISLEIMSDPVVLESGHTYDRSSITKWFASGN--ITCPKTGKTLVSTV-LVDNFSVKQV 340
Query: 135 IQAWCADNSAY----GIDRIPTPKAPLSKLQIIKLIKDIWKPEL-------QTKTLIQLE 183
IQ++ N G ++ ++ L+ + KL + EL K L+++
Sbjct: 341 IQSYSKQNGVVMGQKGKKKVDVAES-LAAEEAGKLTAEFLAGELIKGDEEEMVKALVEIR 399
Query: 184 VFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSEYMKLSAF 243
+ + R C+ EAGV +++ + + + Q + G +++ + +
Sbjct: 400 ILTKTSTFYRSCLVEAGVVESLMKILRSDDPRIQENAMAGIMNLSKDIAGKTRIVGEDGG 459
Query: 244 EIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQIFQNIIRV 303
+ IVE L+D + ++ + AL L ++ S+ + + I ++R+
Sbjct: 460 GLRLIVE------VLNDGARRESRQYAAAALFYLSSL--GDYSRLIGEISDAI-PGLVRI 510
Query: 304 LKQRVI---AQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTA--SEKKTTEL 358
+K A++ A++ +L P R++ +G V L++L + S+ T +
Sbjct: 511 VKSCDYGDSAKRNALIAIRSLLMNQPDNHWRILA--AGIVPVLLDLVKSEEISDGVTADS 568
Query: 359 ILGILFHLCSCADGRAQFLSHRAAIAVVTKRI--MQVSPAADDRAILILSLICKFSGN 414
+ IL + DG L R + + K + +VSPA + +L +C G+
Sbjct: 569 -MAILAKMAEYPDGMISVL-RRGGLKLAVKILGSSEVSPATKQHCVALLLNLCHNGGS 624
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 175 (66.7 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 49/138 (35%), Positives = 69/138 (50%)
Query: 63 DHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKD 122
D QDI P FICPISL+ M+DPVT TG TY+R +I W G+ CP T Q L D
Sbjct: 60 DLQDI--PSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGH--LTCPTTMQELWDD 115
Query: 123 LDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDIWKPELQTKTLIQL 182
+TPN TL LI W + Y + + + ++I+ +K K + + L +L
Sbjct: 116 T-VTPNKTLHHLIYTWFSQK--YVLMKKRSEDVQGRAIEILGTLKKA-KGQARVHALSEL 171
Query: 183 EVFAAENERNRKCMAEAG 200
+ + RK + E G
Sbjct: 172 KQIVIAHLMARKTVVEEG 189
Score = 143 (55.4 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 66/291 (22%), Positives = 133/291 (45%)
Query: 122 DLDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDIWKPELQTKTLIQ 181
D +TPN TL LI W + Y + + + ++I+ +K K + + L +
Sbjct: 114 DDTVTPNKTLHHLIYTWFSQK--YVLMKKRSEDVQGRAIEILGTLKKA-KGQARVHALSE 170
Query: 182 LEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSEYMKLS 241
L+ + RK + E G ++++ ++ + VG E ++IL + S+ K
Sbjct: 171 LKQIVIAHLMARKTVVEEGGV-SVISSLLGPFTSHAVGS-E-VVAILVSLDLDSD-SKSG 226
Query: 242 AFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQIFQNII 301
+ K+ S V L+D S E K + R+++ +++ + + ++
Sbjct: 227 LMQPAKV--SLI-VDMLNDGS----NETKINCARLIRGLVEEKGFRAELVSSHSLLVGLM 279
Query: 302 RVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTELILG 361
R++K + + G++ AL+L+ + R +MV GAV +L+++ L + + + EL L
Sbjct: 280 RLVKDKR-HRNGVSPALRLLKPISVHKQVRSLMVSIGAVPQLVDI-LPSLDPECLELALF 337
Query: 362 ILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICKFS 412
+L LC+ +GR I + +M+VS + A+ IL +CK +
Sbjct: 338 VLDALCTDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYALSILWSVCKLA 388
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 175 (66.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 34/78 (43%), Positives = 46/78 (58%)
Query: 65 QDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLD 124
+ + PE F CP+S ++M+DPV +G TYD+ I+ WL GN CP T+Q LP
Sbjct: 70 ETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRT--CPKTQQVLPHTA- 126
Query: 125 LTPNHTLRRLIQAWCADN 142
LTPN +R +I WC N
Sbjct: 127 LTPNLLIREMISKWCKKN 144
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 173 (66.0 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 38/84 (45%), Positives = 50/84 (59%)
Query: 62 DDHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPK 121
D+H+ E P+YFICPISL++MKDP A G TY+ E+I WL QG + P+T L
Sbjct: 320 DEHR--EAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWL-QGGHETS-PMTNTKL-H 374
Query: 122 DLDLTPNHTLRRLIQAWCADNSAY 145
L PN LR IQ W +S++
Sbjct: 375 HTKLVPNLALRSAIQEWLHASSSF 398
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 153 (58.9 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 33/87 (37%), Positives = 50/87 (57%)
Query: 62 DDHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPK 121
++H +PE F C +S +M DPV +G T++R I+ W +GN++ CP++K+ L
Sbjct: 213 EEHNGT-LPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDS--CPISKRKLD- 268
Query: 122 DLDLTPNHTLRRLIQAWCADNSAYGID 148
D L PN L+ I WCA N G+D
Sbjct: 269 DFTLKPNVELKSQISEWCAKN---GLD 292
Score = 65 (27.9 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 46/243 (18%), Positives = 101/243 (41%)
Query: 173 ELQTKTLIQLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGG--LEGALSILHF 230
+ Q K + + + R + M+ + ++TY+ N ++N G ++G L +L
Sbjct: 390 DAQIKVVEDVRSRFEHSTRAFRSMSPSKFLEPLITYLKNALERNGTAGEIIKGGLDLLLA 449
Query: 231 FKITSEYMKLSAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNI----IQAASS 286
F ++ + + E +++ + F+ + L+ E + E + L +L N + SS
Sbjct: 450 F-LSGNRRAIESLE-EEVFKMFS--VFLESEVVA---EEALNILEVLSNHPHGPSKITSS 502
Query: 287 KFLQRLKPQIFQNIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIEL 346
L L + + +Q +I + +++++++ L+ MV + +L
Sbjct: 503 GSLSSLLKIVESQAEHLQEQAMITLKNLSSSMEICLE----------MVSLDFIQKLTSF 552
Query: 347 ELTASEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILS 406
+K + + IL +LCS GR +A + + + P + AI IL
Sbjct: 553 ---LQQKVFCKHSIIILKNLCSTEKGRGCITETPDCLASIAELLESNVPEEQENAISILL 609
Query: 407 LIC 409
+C
Sbjct: 610 QLC 612
Score = 55 (24.4 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 23/118 (19%), Positives = 52/118 (44%)
Query: 174 LQTKTLIQLEVFAAEN----ERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILH 229
LQ K + + +N E+ R C+ E P + + I + N E A+SIL
Sbjct: 553 LQQKVFCKHSIIILKNLCSTEKGRGCITET--PDCLAS-IAELLESNVPEEQENAISIL- 608
Query: 230 FFKITSEYMKLSAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSK 287
++ + ++ + + + ++ ++ + + E E+K A +L+ +++ S K
Sbjct: 609 -LQLCVQKIEYCCLVVREATDIYSSLILISNNGTE---EVKVSASELLRALVEVDSDK 662
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 170 (64.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 35/85 (41%), Positives = 48/85 (56%)
Query: 59 FQMDDHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQP 118
F +D + P YFICPIS ++M++P A G TY+ ES+ WL G+ + P+T
Sbjct: 487 FSDEDSVTRQPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETS--PMTNLK 544
Query: 119 LPKDLDLTPNHTLRRLIQAWCADNS 143
L + +L PNH LR IQ W NS
Sbjct: 545 LAHN-NLVPNHALRSAIQEWLQRNS 568
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 170 (64.9 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 39/92 (42%), Positives = 51/92 (55%)
Query: 63 DHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKD 122
D +E+P+ F C +S IM DPV +G TY++ I WL N++ CP KQ L +
Sbjct: 68 DSSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWL---NHDLTCPTAKQVLYR- 123
Query: 123 LDLTPNHTLRRLIQAWCADNSAYGIDRIPTPK 154
+ LTPNH + LI WC N Y DR P PK
Sbjct: 124 VCLTPNHLINELITRWCLANK-Y--DR-PAPK 151
Score = 38 (18.4 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 13/64 (20%), Positives = 25/64 (39%)
Query: 351 SEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICK 410
S + E I+ LF++ + + + I ++ K + Q S A L L+ +
Sbjct: 228 SNPELQENIVTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSD 287
Query: 411 FSGN 414
N
Sbjct: 288 IDSN 291
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 167 (63.8 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 67 IEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLT 126
I IP YF CP+S ++M DPV +G T+DR SI+ WL N A CP T+Q L +L
Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWL--DNGLAVCPRTRQVLTHQ-ELI 292
Query: 127 PNHTLRRLIQAWCADN 142
PN+T++ +I +W N
Sbjct: 293 PNYTVKAMIASWLEAN 308
Score = 48 (22.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 19/79 (24%), Positives = 34/79 (43%)
Query: 305 KQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTELILGILF 364
++++ + + A L L + S N+ ++VE GA+ L+ + L + E LF
Sbjct: 526 EEKLTQEHAVTALLNLSI----SELNKAMIVEVGAIEPLVHV-LNTGNDRAKENSAASLF 580
Query: 365 HLCSCADGRAQFLSHRAAI 383
L R + AAI
Sbjct: 581 SLSVLQVNRERIGQSNAAI 599
Score = 47 (21.6 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 18/93 (19%), Positives = 37/93 (39%)
Query: 314 INAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTELILGILFHLCSCADGR 373
++ A+ L+ + G R +V G + L+E + ++ E +L LC +
Sbjct: 654 VDKAVALLANLSAVGEGRQAIVREGGIPLLVET-VDLGSQRGKENAASVLLQLCLNSPKF 712
Query: 374 AQFLSHRAAIAVVTKRIMQVSPAADDRAILILS 406
+ AI + + A ++A +LS
Sbjct: 713 CTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLS 745
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 159 (61.0 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 33/75 (44%), Positives = 44/75 (58%)
Query: 71 EYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNHT 130
E F CPIS++IM+DP A G TY+ E WL G + P T +PL ++ +L PNHT
Sbjct: 235 EDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTS--PKTNKPL-ENHNLVPNHT 291
Query: 131 LRRLIQAWCADNSAY 145
LR +I+ W N Y
Sbjct: 292 LRIIIKDWLEKNPNY 306
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 165 (63.1 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 89/363 (24%), Positives = 153/363 (42%)
Query: 71 EYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNHT 130
E +CPISL+IM DPV TG TYDR SI W G+ N CP+T + L +L N +
Sbjct: 290 EDLLCPISLEIMTDPVVIETGHTYDRSSITKWF--GSGNITCPITGKILTST-ELVDNVS 346
Query: 131 LRRLIQAWCADNSAY--GIDR--------IPTPKAPLSKLQIIK--LIKDIWK--PELQT 176
+R++I+ C N GI R +P A ++I L ++ E+
Sbjct: 347 VRQVIRKHCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMIY 406
Query: 177 KTLIQLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSE 236
+ + ++ V + NR C+ +AG +L + + + Q + G IL+ K +
Sbjct: 407 RAVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAG---ILNLSKHVTG 463
Query: 237 YMKLSAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQI 296
K++ + +VE L++ + + + AL L ++ S+ + P
Sbjct: 464 KSKIAGEGLKILVE------ILNEGAKTETRLYSASALFYLSSVEDY--SRLIGE-NPDA 514
Query: 297 FQNIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKK-- 354
++ ++K +AL ++ N ++ +GAV L++L L + E
Sbjct: 515 IPGLMNIVKGDDYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDL-LRSGEISGG 573
Query: 355 TTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIM--QVSPAA-DDRAI-LILSLICK 410
T L L L DG + R + + K + + SP A + LIL+L C
Sbjct: 574 LTADCLATLAKLAEYPDGTIGVI-RRGGLKLAVKILSSSEDSPVAVKQHCVGLILNL-CL 631
Query: 411 FSG 413
G
Sbjct: 632 NGG 634
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 150 (57.9 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 67 IEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLT 126
+ +P F C +SL++M DPV +G T++R I+ W+ G CP T+Q L LT
Sbjct: 238 VRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGL--MVCPKTRQAL-SHTTLT 294
Query: 127 PNHTLRRLIQAWCADNSAYGID 148
PN +R + +WC N+ Y D
Sbjct: 295 PNFIVRAFLASWCETNNVYPPD 316
Score = 60 (26.2 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 24/93 (25%), Positives = 43/93 (46%)
Query: 330 NRMIMVESGAVFELIELELTASEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKR 389
N+ ++E+GAV L+EL A E + +L +L + +G+ + I V+ +
Sbjct: 579 NKTKVIEAGAVRYLVELMDPAFGM--VEKAVVVLANLATVREGKIA-IGEEGGIPVLVEV 635
Query: 390 IMQVSPAADDRAILILSLICKFSGNF-NFVVQE 421
+ S + A L +C S F N V++E
Sbjct: 636 VELGSARGKENATAALLQLCTHSPKFCNNVIRE 668
Score = 45 (20.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 317 ALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTELILGILFHL 366
A+ +L+ + N+ ++ ESGA+ LI + T ++ LF L
Sbjct: 483 AVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSL 532
Score = 40 (19.1 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 19/86 (22%), Positives = 38/86 (44%)
Query: 298 QNIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTE 357
+ +I LK + Q A ++ + A S NR+++ A+ L+ L + E+ +
Sbjct: 424 KKLIDDLKSSSLDTQR-EATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQAD 482
Query: 358 LILGILFHLCSCADGRAQFLSHRAAI 383
+ +L +L S D ++ AI
Sbjct: 483 AVTCLL-NL-SINDNNKSLIAESGAI 506
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 162 (62.1 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 33/69 (47%), Positives = 43/69 (62%)
Query: 70 PEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNH 129
P+ F+CPI+ +IMKDPV A G +Y+RE+IE W+ N P+T PL L LTPN
Sbjct: 418 PDEFLCPITREIMKDPVIAADGYSYEREAIEAWI--STKNRTSPMTNLPLQTTL-LTPNR 474
Query: 130 TLRRLIQAW 138
TL+ I W
Sbjct: 475 TLKMAIFRW 483
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 161 (61.7 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 32/70 (45%), Positives = 45/70 (64%)
Query: 69 IPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPN 128
IP+ FICPI+ ++MKDPV A G +Y+RE++E W+ + + P+T LP L LTPN
Sbjct: 402 IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTS--PMTNLALPS-LVLTPN 458
Query: 129 HTLRRLIQAW 138
TL+ I W
Sbjct: 459 RTLKMAINRW 468
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 161 (61.7 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 32/70 (45%), Positives = 45/70 (64%)
Query: 69 IPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPN 128
IP+ FICPI+ ++MKDPV A G +Y+RE++E W+ + + P+T LP L LTPN
Sbjct: 404 IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTS--PMTNLALPS-LVLTPN 460
Query: 129 HTLRRLIQAW 138
TL+ I W
Sbjct: 461 RTLKMAINRW 470
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 161 (61.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 70 PEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNH 129
P ++ CPI +IM+DP A G TY+R++I+ W+ Q + + PVTK L K DLTPNH
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWI-QKHQDVS-PVTKHRL-KHSDLTPNH 765
Query: 130 TLRRLIQAW 138
TLR I+ W
Sbjct: 766 TLRSAIREW 774
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 156 (60.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 30/70 (42%), Positives = 46/70 (65%)
Query: 69 IPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPN 128
IP+ FICPI+ ++MKDPV A G +Y++E++E+W+ + + P+T LP + LTPN
Sbjct: 404 IPDEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTS--PMTNLVLPSAV-LTPN 460
Query: 129 HTLRRLIQAW 138
TL+ I W
Sbjct: 461 RTLKMAINRW 470
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 154 (59.3 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 68 EIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTP 127
EIP+ FICPI+ ++MKDP+ A G +Y++E++E+W+ + + P+T L + LTP
Sbjct: 402 EIPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTS--PMTNLVLSSVI-LTP 458
Query: 128 NHTLRRLIQAWCAD 141
N TL+ I W ++
Sbjct: 459 NRTLKMAIDRWLSE 472
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 154 (59.3 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 68 EIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTP 127
EIP+ FICPI+ ++MKDP+ A G +Y++E++E+W+ + + P+T L + LTP
Sbjct: 403 EIPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTS--PMTNLVLSSVI-LTP 459
Query: 128 NHTLRRLIQAWCAD 141
N TL+ I W ++
Sbjct: 460 NRTLKMAIDRWLSE 473
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 108 (43.1 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 47/176 (26%), Positives = 82/176 (46%)
Query: 247 KIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQIFQNIIRVLKQ 306
KIV S +V L D E + H L ++ +K + + + + ++ L+
Sbjct: 312 KIVRS-GFVPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIGVLGAV-EPLLHALRS 369
Query: 307 RVIAQQGINAALKLM-LDACPSGRNRMIMVESGAVFELIELELTASEKKTTELILGILFH 365
+ +AAL L L PS R R+ V +GAV L L + S T+ ++L +L +
Sbjct: 370 SESERARQDAALALYHLSLIPSNRTRL--VRAGAVPTL--LSMVRSGDSTSRILL-VLCN 424
Query: 366 LCSCADGRAQFLSHRAAIAVVTKRIMQV----SPAADDRAILILSLICKFSGNFNF 417
L +C DG+ L A +A++ ++ +V S AA + + +L +C+ GN F
Sbjct: 425 LAACPDGKGAMLDGNA-VAILVGKLREVGGGDSEAARENCVAVLLTLCQ--GNLRF 477
Score = 93 (37.8 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 61 MDDHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLP 120
+ H+ E P F+CPI+ +M DPV +G T++R S++ N P
Sbjct: 23 LPQHKHDETPPEFLCPITGFLMSDPVVVSSGQTFERLSVQVC----RNLGYIPDLLDGTR 78
Query: 121 KDLD-LTPNHTLRRLIQAWC 139
DL + PN ++ I +WC
Sbjct: 79 PDLSTVIPNLAMKSTIFSWC 98
>UNIPROTKB|Q0DR28 [details] [associations]
symbol:PUB57 "U-box domain-containing protein 57"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000719
InterPro:IPR003613 InterPro:IPR008266 InterPro:IPR011009
Pfam:PF00069 Pfam:PF04564 PROSITE:PS00109 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 EMBL:DP000009 EMBL:AP008209 GO:GO:0004713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC114983 EMBL:AK069682 RefSeq:NP_001050396.1 UniGene:Os.52876
EnsemblPlants:LOC_Os03g31070.1 GeneID:4333147
KEGG:dosa:Os03t0424200-01 KEGG:osa:4333147 Gramene:Q0DR28
OMA:IDINATF Uniprot:Q0DR28
Length = 518
Score = 154 (59.3 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 35/83 (42%), Positives = 47/83 (56%)
Query: 66 DIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDL 125
D +P FICPIS++IMKDP A G TY+ E+I W +G + + P+T LP +L+L
Sbjct: 432 DSSVPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRS--PMTNLALP-NLNL 488
Query: 126 TPNHTLRRLIQAWCAD---NSAY 145
PN LR I + N AY
Sbjct: 489 VPNRVLRSFIHGYLQQQQPNPAY 511
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 153 (58.9 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 69 IPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPN 128
IP+ F+CPI+ ++MKDPV A G +Y++E++E+W+ + + P+T LP + LTPN
Sbjct: 404 IPDEFLCPITRELMKDPVIASDGYSYEKEAMENWISKKKRTS--PMTNLILPS-MVLTPN 460
Query: 129 HTLRRLIQAW 138
TL+ I W
Sbjct: 461 RTLKMAISRW 470
>TAIR|locus:2176177 [details] [associations]
symbol:AT5G51270 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AB023044
HSSP:Q9WUD1 HOGENOM:HOG000237993 IPI:IPI00525770 RefSeq:NP_199940.1
UniGene:At.55484 ProteinModelPortal:Q9LU47 SMR:Q9LU47 PRIDE:Q9LU47
EnsemblPlants:AT5G51270.1 GeneID:835201 KEGG:ath:AT5G51270
GeneFarm:2016 TAIR:At5g51270 InParanoid:Q9LU47 OMA:ATHEAKE
PhylomeDB:Q9LU47 ProtClustDB:CLSN2916710 Genevestigator:Q9LU47
Uniprot:Q9LU47
Length = 819
Score = 156 (60.0 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 30/69 (43%), Positives = 41/69 (59%)
Query: 70 PEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNH 129
P +F CP+ +MK+P A G TYDR +IE W+ N+ PVT PL ++++L PNH
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWM---ENHRTSPVTNSPL-QNVNLLPNH 805
Query: 130 TLRRLIQAW 138
TL I W
Sbjct: 806 TLYAAIVEW 814
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 159 (61.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 34/83 (40%), Positives = 49/83 (59%)
Query: 69 IPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAE---CPVTKQPLPKDLDL 125
I E FICP++ Q+M +PVT G T++RE+IE W + N + CP+T + L DL
Sbjct: 25 IYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKEL-SITDL 83
Query: 126 TPNHTLRRLIQAWCADNSAYGID 148
+P+ LR I+ W A N A +D
Sbjct: 84 SPSIALRNTIEEWRARNDALKLD 106
Score = 39 (18.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 11/53 (20%), Positives = 26/53 (49%)
Query: 295 QIFQNIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMV--ESGAVFELIE 345
+I +N++++ QG A+ + L +CP+ ++ S A+ L++
Sbjct: 409 EIVENLLQLTSNTGPEIQGKLLAVLVGLTSCPNSVINVVSAIRNSAAIISLVQ 461
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 153 (58.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 70 PEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNH 129
P +++CPI ++MKDP+ A G TY+ E+I WL G++ + P+T + +D +L PNH
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTS--PMTNLKM-EDCNLIPNH 792
Query: 130 TLRRLIQAW 138
L IQ W
Sbjct: 793 ALHLAIQDW 801
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 155 (59.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 36/110 (32%), Positives = 55/110 (50%)
Query: 57 LLFQMDDHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTK 116
LL + + I F CP+SL++M DPV +G TY++ I+ W+ G CP T+
Sbjct: 221 LLIKQTQTSSVAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLK--VCPKTR 278
Query: 117 QPLPKDLDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLI 166
Q L L PN+T++ LI WC N ++P P S ++ L+
Sbjct: 279 QTLTHTT-LIPNYTVKALIANWCETNDV----KLPDPNKSTSLNELSPLL 323
Score = 42 (19.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 315 NAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEK 353
NAA L+ + SGR ++++ GAV L+ L + + +
Sbjct: 768 NAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPR 806
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 148 (57.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 31/71 (43%), Positives = 41/71 (57%)
Query: 68 EIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTP 127
E P+YFICPI+ IM+DP A G TY+ E+I W +G+ + P+ + LP L P
Sbjct: 352 EPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETS--PMINKRLPHT-SLVP 408
Query: 128 NHTLRRLIQAW 138
N LR IQ W
Sbjct: 409 NLALRSAIQEW 419
>UNIPROTKB|H3BTA3 [details] [associations]
symbol:STUB1 "E3 ubiquitin-protein ligase CHIP"
species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:Z92544 HGNC:HGNC:11427 Ensembl:ENST00000564316 Uniprot:H3BTA3
Length = 157
Score = 126 (49.4 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 28/75 (37%), Positives = 47/75 (62%)
Query: 68 EIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTP 127
+IP+Y IS ++M++P +GITYDR+ IE L Q + + PVT+ PL ++ L P
Sbjct: 80 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL-QRVGHFD-PVTRSPLTQE-QLIP 136
Query: 128 NHTLRRLIQAWCADN 142
N ++ +I A+ ++N
Sbjct: 137 NLAMKEVIDAFISEN 151
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 146 (56.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 35/97 (36%), Positives = 52/97 (53%)
Query: 60 QMDDHQDIE-----IPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAE--- 111
Q DD E I E FICP++ ++M DPVT G T++RE+IE W + ++
Sbjct: 9 QSDDSSHFERGVDHIYEAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPS 68
Query: 112 CPVTKQPLPKDLDLTPNHTLRRLIQAWCADNSAYGID 148
CP+T Q L D++ + LR I+ W + N A +D
Sbjct: 69 CPLTSQELTST-DVSASIALRNTIEEWRSRNDAAKLD 104
Score = 50 (22.7 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 314 INAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTELILGILFHL 366
+N K+ C S R +VE GAV +L+ L L K E L L L
Sbjct: 649 VNGLCKIHQGIC-SLRETFCLVEGGAVEKLVAL-LDHENVKVVEAALAALSSL 699
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 145 (56.1 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 76/371 (20%), Positives = 157/371 (42%)
Query: 63 DHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKD 122
D +E+P+ FIC +S +IM +P+ +G T+++ I WL + CP TKQ L
Sbjct: 59 DISPVEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWL---KHERTCPRTKQVLYHR 115
Query: 123 LDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKL--QIIKLIKDIWKPE-LQTKTL 179
+ PNH + +I+ WC + DR T + + L++ I P ++ +T
Sbjct: 116 F-MIPNHLINEVIKEWCL---IHNFDRPKTSDEVIDLFTGDLESLLQRISSPSSVEDQTE 171
Query: 180 IQLEVFAAENERNRKCMA-EAGVPRAMLTYI--VNCCDKNQVGGLEGALSILHFFKITSE 236
E+ + C+ A +P ++ + ++ + + LE ++ LH F TSE
Sbjct: 172 AAKELALKAKRFSSVCVYFVAKIPDSITRLLTPLSISEDSNPEFLENIVTALHIFS-TSE 230
Query: 237 YMKLSAFEIDKIVESFTWVLALDDESIENHKEI-KSHALRILKNIIQAASSKFLQRLKPQ 295
K +V VL L + ++ + + H+ + ++ S+K + +
Sbjct: 231 KNKT-------LVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSLSYTDSNKIIIG-NSE 282
Query: 296 IFQNIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKT 355
+ + +I V+++ + A + + CP V G + I+ ++ A
Sbjct: 283 VLKALIHVIEEG--DSLATSEAFSALSNLCPVKEISEKAVSEGLIRAAIK-KIKAGSN-- 337
Query: 356 TELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAA-DDRAILILSLICK-FSG 413
++L +L + + + + + I + + + D+ A++I+ ICK +
Sbjct: 338 VSMLLSLLAFVSTQNHQTTEEMDNLGLIYDLFSILRNSNSLVNDENAVVIVYNICKSYKA 397
Query: 414 NFNFVVQEMSR 424
N V++E R
Sbjct: 398 LQNVVLREEKR 408
>WB|WBGene00000500 [details] [associations]
symbol:chn-1 species:6239 "Caenorhabditis elegans"
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IDA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040011 "locomotion"
evidence=IGI;IMP] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0018991 "oviposition" evidence=IGI] [GO:0045214
"sarcomere organization" evidence=IGI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0030544 "Hsp70 protein binding" evidence=IPI] [GO:0051087
"chaperone binding" evidence=IPI] InterPro:IPR001440
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 GO:GO:0005737
GO:GO:0018991 GO:GO:0002119 GO:GO:0040011 Gene3D:1.25.40.10
GO:GO:0045214 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000209 GO:GO:0000151 GO:GO:0051865 KO:K09561
GeneTree:ENSGT00650000093277 EMBL:FO081495 EMBL:AF303269 PIR:T25874
RefSeq:NP_491781.2 UniGene:Cel.19411 ProteinModelPortal:G5ECY6
SMR:G5ECY6 EnsemblMetazoa:T09B4.10.1 EnsemblMetazoa:T09B4.10.2
GeneID:172303 KEGG:cel:CELE_T09B4.10 CTD:172303 WormBase:T09B4.10
OMA:HSWAYKL NextBio:874925 Uniprot:G5ECY6
Length = 266
Score = 140 (54.3 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 34/89 (38%), Positives = 57/89 (64%)
Query: 55 LSLLFQMDDHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESI-EHWLFQGNNNAECP 113
L+L Q + Q+ E+PE I+L++MK+PV +GITYDRE I +H G+ + P
Sbjct: 172 LTLATQ-EKRQNREVPEMLCGKITLELMKEPVIVPSGITYDREEIVQHLRRIGHFD---P 227
Query: 114 VTKQPLPKDLDLTPNHTLRRLIQAWCADN 142
VT++PL ++ ++ PN+ L+ +I+ + DN
Sbjct: 228 VTRKPLTEN-EIIPNYALKEVIEKFLDDN 255
>TAIR|locus:2047605 [details] [associations]
symbol:AT2G19410 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HSSP:P36897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC003058 HOGENOM:HOG000237993
IPI:IPI00517039 PIR:T01289 RefSeq:NP_179531.1 UniGene:At.52830
ProteinModelPortal:Q8S8S7 SMR:Q8S8S7 PRIDE:Q8S8S7
EnsemblPlants:AT2G19410.1 GeneID:816460 KEGG:ath:AT2G19410
GeneFarm:2021 TAIR:At2g19410 InParanoid:Q8S8S7 OMA:VETANSK
PhylomeDB:Q8S8S7 ProtClustDB:CLSN2683172 Genevestigator:Q8S8S7
Uniprot:Q8S8S7
Length = 801
Score = 148 (57.2 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 31/73 (42%), Positives = 45/73 (61%)
Query: 66 DIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDL 125
++ P ++ CPI +IM++P A G TY+R++I WL + N + PVT+Q L L
Sbjct: 722 NLRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWLEKHNIS---PVTRQKLDH-FKL 777
Query: 126 TPNHTLRRLIQAW 138
TPNHTLR I+ W
Sbjct: 778 TPNHTLRSAIRDW 790
>TAIR|locus:2151641 [details] [associations]
symbol:AT5G61560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004713
"protein tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0002238 "response to molecule
of fungal origin" evidence=RCA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] [GO:0006865 "amino acid
transport" evidence=RCA] [GO:0009581 "detection of external
stimulus" evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR003613 InterPro:IPR006016 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00582 Pfam:PF04564
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 EMBL:AB012239 HSSP:Q8VZ40
HOGENOM:HOG000237993 EMBL:AK228747 IPI:IPI00543972 IPI:IPI00886514
RefSeq:NP_200964.2 UniGene:At.29098 ProteinModelPortal:Q9FKG5
SMR:Q9FKG5 STRING:Q9FKG5 PaxDb:Q9FKG5 PRIDE:Q9FKG5
EnsemblPlants:AT5G61560.1 GeneID:836277 KEGG:ath:AT5G61560
GeneFarm:2020 TAIR:At5g61560 InParanoid:Q9FKG5 OMA:CIERETE
PhylomeDB:Q9FKG5 ProtClustDB:CLSN2918426 Genevestigator:Q9FKG5
Uniprot:Q9FKG5
Length = 796
Score = 146 (56.5 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 63 DHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKD 122
DH P +F CPI+ +M++P A G TY++ +I+ WL Q N+ + P+T P P D
Sbjct: 720 DHHH-NAPTHFYCPITKDVMENPCVASDGYTYEKRAIKEWL-QKNHKS--PMTDLPFPSD 775
Query: 123 LDLTPNHTLRRLIQAW 138
L PNH+L I+ W
Sbjct: 776 -SLLPNHSLLSAIKEW 790
>UNIPROTKB|F1P105 [details] [associations]
symbol:STUB1 "STIP1 homology and U box-containing protein
1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IEA] [GO:0019900 "kinase binding"
evidence=IEA] [GO:0030544 "Hsp70 protein binding" evidence=IEA]
[GO:0030579 "ubiquitin-dependent SMAD protein catabolic process"
evidence=IEA] [GO:0030911 "TPR domain binding" evidence=IEA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031943 "regulation of glucocorticoid metabolic
process" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0042405 "nuclear inclusion body" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0046332 "SMAD binding" evidence=IEA]
[GO:0051787 "misfolded protein binding" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0071218 "cellular response to
misfolded protein" evidence=IEA] [GO:0090035 "positive regulation
of chaperone-mediated protein complex assembly" evidence=IEA]
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00504 GO:GO:0005737 GO:GO:0043161 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515
GO:GO:0032436 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0042405 GO:GO:0071218 GO:GO:0034450 IPI:IPI00600865
OMA:QENELHS GO:GO:0090035 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 EMBL:AADN02049413 EMBL:AADN02049414
Ensembl:ENSGALT00000001529 Uniprot:F1P105
Length = 251
Score = 136 (52.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 32/89 (35%), Positives = 54/89 (60%)
Query: 55 LSLLFQMDD-HQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECP 113
+ L Q+D+ + +IP+Y IS ++M++P +GITYDR+ IE L Q + + P
Sbjct: 160 IQLFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL-QRVGHFD-P 217
Query: 114 VTKQPLPKDLDLTPNHTLRRLIQAWCADN 142
VT+ PL +D L PN ++ +I A+ ++N
Sbjct: 218 VTRSPLTQD-QLIPNLAMKEVIDAFISEN 245
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 143 (55.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 29/69 (42%), Positives = 39/69 (56%)
Query: 70 PEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNH 129
P +FICP+ +M +P A G TYDR +IE WL + N + P+T PL +L PN+
Sbjct: 767 PTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKEHNTS---PMTDSPLHSK-NLLPNY 822
Query: 130 TLRRLIQAW 138
TL I W
Sbjct: 823 TLYTAIMEW 831
>ZFIN|ZDB-GENE-030131-2963 [details] [associations]
symbol:stub1 "STIP1 homology and U-Box containing
protein 1" species:7955 "Danio rerio" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0030544 "Hsp70 protein
binding" evidence=ISS] [GO:0030911 "TPR domain binding"
evidence=ISS] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=ISS] [GO:0046332 "SMAD binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0051879 "Hsp90 protein
binding" evidence=ISS] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=ISS] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=ISS] InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00504 ZFIN:ZDB-GENE-030131-2963 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR013105 Pfam:PF07719 GO:GO:0000151
GeneTree:ENSGT00650000093277 EMBL:CT573356 IPI:IPI00499851
Ensembl:ENSDART00000145075 Bgee:F1Q8K3 Uniprot:F1Q8K3
Length = 287
Score = 135 (52.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 33/87 (37%), Positives = 52/87 (59%)
Query: 57 LLFQMDD-HQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVT 115
L Q+D+ + EIP+Y IS ++M++P +GITYDR+ IE L Q + + PVT
Sbjct: 198 LFSQVDEKRKKREIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL-QRVGHFD-PVT 255
Query: 116 KQPLPKDLDLTPNHTLRRLIQAWCADN 142
+ PL +D L PN ++ +I A+ +N
Sbjct: 256 RSPLTQD-QLIPNLAMKEVIDAFIQEN 281
>UNIPROTKB|Q5ZHY5 [details] [associations]
symbol:STUB1 "STIP1 homology and U box-containing protein
1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0071218 "cellular response to misfolded
protein" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=ISS] [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0042803
GO:GO:0043161 GO:GO:0006281 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006515 GO:GO:0000209 GO:GO:0000151
GO:GO:0071218 GO:GO:0034450 KO:K09561 EMBL:AJ720999 IPI:IPI00600865
RefSeq:NP_001026577.1 UniGene:Gga.6217 ProteinModelPortal:Q5ZHY5
SMR:Q5ZHY5 IntAct:Q5ZHY5 STRING:Q5ZHY5 GeneID:426918
KEGG:gga:426918 CTD:10273 eggNOG:COG5113 HOVERGEN:HBG053046
InParanoid:Q5ZHY5 OrthoDB:EOG4Z36F9 NextBio:20828310 Uniprot:Q5ZHY5
Length = 314
Score = 134 (52.2 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 32/87 (36%), Positives = 53/87 (60%)
Query: 57 LLFQMDD-HQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVT 115
L Q+D+ + +IP+Y IS ++M++P +GITYDR+ IE L Q + + PVT
Sbjct: 225 LFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL-QRVGHFD-PVT 282
Query: 116 KQPLPKDLDLTPNHTLRRLIQAWCADN 142
+ PL +D L PN ++ +I A+ ++N
Sbjct: 283 RSPLTQD-QLIPNLAMKEVIDAFISEN 308
>UNIPROTKB|J9NRV4 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00504 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 OMA:QENELHS
GeneTree:ENSGT00650000093277 EMBL:AAEX03004675
Ensembl:ENSCAFT00000049790 Uniprot:J9NRV4
Length = 231
Score = 130 (50.8 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 31/87 (35%), Positives = 53/87 (60%)
Query: 57 LLFQMDD-HQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVT 115
L Q+D+ + +IP+Y IS ++M++P +GITYDR+ IE L Q + + PVT
Sbjct: 142 LFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL-QRVGHFD-PVT 199
Query: 116 KQPLPKDLDLTPNHTLRRLIQAWCADN 142
+ PL ++ L PN ++ +I A+ ++N
Sbjct: 200 RSPLTQE-QLIPNLAMKEVIDAFISEN 225
>DICTYBASE|DDB_G0293212 [details] [associations]
symbol:DDB_G0293212 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003613 Pfam:PF04564
SMART:SM00382 SMART:SM00504 dictyBase:DDB_G0293212 GO:GO:0005524
EMBL:AAFI02000200 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0017111 GO:GO:0004842 GO:GO:0000151 eggNOG:COG0507
InterPro:IPR010285 Pfam:PF05970 RefSeq:XP_629245.1
ProteinModelPortal:Q54C21 EnsemblProtists:DDB0191825 GeneID:8629127
KEGG:ddi:DDB_G0293212 InParanoid:Q54C21 OMA:RNANQEN
ProtClustDB:CLSZ2429302 Uniprot:Q54C21
Length = 846
Score = 138 (53.6 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 31/73 (42%), Positives = 38/73 (52%)
Query: 66 DIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDL 125
D IP YF+CPIS +IM+ P A G T++R SI W A VTK+P L
Sbjct: 769 DSTIPIYFLCPISQKIMEHPYVAPDGYTFERSSILEWF--DKRGAISFVTKRPFSTSAIL 826
Query: 126 TPNHTLRRLIQAW 138
PN L+ IQ W
Sbjct: 827 IPNRNLKAQIQEW 839
>UNIPROTKB|F1MUH4 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 GeneTree:ENSGT00650000093277
EMBL:DAAA02057282 IPI:IPI00714977 Ensembl:ENSBTAT00000057514
ArrayExpress:F1MUH4 Uniprot:F1MUH4
Length = 302
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 31/87 (35%), Positives = 53/87 (60%)
Query: 57 LLFQMDD-HQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVT 115
L Q+D+ + +IP+Y IS ++M++P +GITYDR+ IE L Q + + PVT
Sbjct: 214 LFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL-QRVGHFD-PVT 271
Query: 116 KQPLPKDLDLTPNHTLRRLIQAWCADN 142
+ PL ++ L PN ++ +I A+ ++N
Sbjct: 272 RSPLTQE-QLIPNLAMKEVIDAFISEN 297
>UNIPROTKB|Q9UNE7 [details] [associations]
symbol:STUB1 "E3 ubiquitin-protein ligase CHIP"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;IMP;TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000209 "protein polyubiquitination"
evidence=IDA;IMP] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0051879 "Hsp90
protein binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030544 "Hsp70 protein binding" evidence=IDA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IDA] [GO:0031943 "regulation of glucocorticoid metabolic
process" evidence=IDA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0030911 "TPR domain binding" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=TAS] [GO:0051604
"protein maturation" evidence=TAS] [GO:0031371 "ubiquitin
conjugating enzyme complex" evidence=TAS] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0046332 "SMAD binding" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=TAS] [GO:0042405 "nuclear
inclusion body" evidence=IDA] [GO:0051787 "misfolded protein
binding" evidence=IDA] [GO:0071218 "cellular response to misfolded
protein" evidence=IDA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IDA] [GO:0090035
"positive regulation of chaperone-mediated protein complex
assembly" evidence=IDA] [GO:0019900 "kinase binding" evidence=IPI]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0042803
Pathway_Interaction_DB:alphasynuclein_pathway GO:GO:0043161
GO:GO:0006281 GO:GO:0030674 EMBL:CH471112 Gene3D:1.25.40.10
GO:GO:0046332 GO:GO:0007179 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0051879 GO:GO:0032436
GO:GO:0051604 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0030512 GO:GO:0042405 GO:GO:0071218 GO:GO:0030544
GO:GO:0034450 EMBL:AE006464 HOGENOM:HOG000163725 KO:K09561
CTD:10273 eggNOG:COG5113 HOVERGEN:HBG053046 OrthoDB:EOG4Z36F9
EMBL:AF039689 EMBL:AF129085 EMBL:AF432221 EMBL:AF217968 EMBL:Z92544
EMBL:BC007545 EMBL:BC017178 EMBL:BC022788 EMBL:BC063617
IPI:IPI00025156 IPI:IPI00645380 RefSeq:NP_005852.2
UniGene:Hs.592081 ProteinModelPortal:Q9UNE7 SMR:Q9UNE7
DIP:DIP-29752N IntAct:Q9UNE7 MINT:MINT-1132706 STRING:Q9UNE7
PhosphoSite:Q9UNE7 DMDM:78099173 PaxDb:Q9UNE7 PRIDE:Q9UNE7
DNASU:10273 Ensembl:ENST00000219548 Ensembl:ENST00000564370
Ensembl:ENST00000565677 GeneID:10273 KEGG:hsa:10273 UCSC:uc002cit.3
GeneCards:GC16P000736 H-InvDB:HIX0012661 HGNC:HGNC:11427 MIM:607207
neXtProt:NX_Q9UNE7 PharmGKB:PA36227 InParanoid:Q9UNE7 OMA:QENELHS
PhylomeDB:Q9UNE7 GenomeRNAi:10273 NextBio:38918 Bgee:Q9UNE7
CleanEx:HS_STUB1 Genevestigator:Q9UNE7 GermOnline:ENSG00000103266
GO:GO:0031371 GO:GO:0051787 GO:GO:0030911 GO:GO:0090035
GO:GO:0031943 GO:GO:0030579 Uniprot:Q9UNE7
Length = 303
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 31/87 (35%), Positives = 53/87 (60%)
Query: 57 LLFQMDD-HQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVT 115
L Q+D+ + +IP+Y IS ++M++P +GITYDR+ IE L Q + + PVT
Sbjct: 214 LFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL-QRVGHFD-PVT 271
Query: 116 KQPLPKDLDLTPNHTLRRLIQAWCADN 142
+ PL ++ L PN ++ +I A+ ++N
Sbjct: 272 RSPLTQE-QLIPNLAMKEVIDAFISEN 297
>UNIPROTKB|F1RG35 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070534 "protein
K63-linked ubiquitination" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0051787 "misfolded protein binding" evidence=IEA]
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042405 "nuclear inclusion body" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031398
"positive regulation of protein ubiquitination" evidence=IEA]
[GO:0030911 "TPR domain binding" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
[GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0043161
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0032436 GO:GO:0000151
GO:GO:0070534 GO:GO:0051865 GO:GO:0042405 GO:GO:0071218
GO:GO:0034450 KO:K09561 OMA:QENELHS GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 GeneTree:ENSGT00650000093277 EMBL:FP016225
RefSeq:XP_003124756.2 Ensembl:ENSSSCT00000008776 GeneID:100511251
KEGG:ssc:100511251 Uniprot:F1RG35
Length = 303
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 31/87 (35%), Positives = 53/87 (60%)
Query: 57 LLFQMDD-HQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVT 115
L Q+D+ + +IP+Y IS ++M++P +GITYDR+ IE L Q + + PVT
Sbjct: 214 LFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL-QRVGHFD-PVT 271
Query: 116 KQPLPKDLDLTPNHTLRRLIQAWCADN 142
+ PL ++ L PN ++ +I A+ ++N
Sbjct: 272 RSPLTQE-QLIPNLAMKEVIDAFISEN 297
>MGI|MGI:1891731 [details] [associations]
symbol:Stub1 "STIP1 homology and U-Box containing protein 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000209 "protein polyubiquitination"
evidence=ISO;IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006457 "protein folding" evidence=TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=ISO;IMP] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=TAS] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019900 "kinase binding" evidence=ISO] [GO:0030544 "Hsp70
protein binding" evidence=ISO;ISS;TAS] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=ISO]
[GO:0030674 "protein binding, bridging" evidence=TAS] [GO:0030911
"TPR domain binding" evidence=ISO;ISS] [GO:0031072 "heat shock
protein binding" evidence=TAS] [GO:0031371 "ubiquitin conjugating
enzyme complex" evidence=TAS] [GO:0031398 "positive regulation of
protein ubiquitination" evidence=ISO;ISS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IPI] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=ISO;ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;ISS] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IDA] [GO:0042405
"nuclear inclusion body" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO;IMP]
[GO:0046332 "SMAD binding" evidence=ISO] [GO:0051604 "protein
maturation" evidence=TAS] [GO:0051787 "misfolded protein binding"
evidence=ISO] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0051879 "Hsp90 protein binding" evidence=ISO;ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO]
[GO:0071218 "cellular response to misfolded protein"
evidence=ISO;IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
UniPathway:UPA00143 MGI:MGI:1891731 GO:GO:0005737 GO:GO:0042803
GO:GO:0006457 GO:GO:0043161 GO:GO:0006281 GO:GO:0030674
Gene3D:1.25.40.10 GO:GO:0046332 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515 GO:GO:0051879
GO:GO:0032436 GO:GO:0051604 GO:GO:0000151 GO:GO:0070534
GO:GO:0051865 GO:GO:0042405 GO:GO:0071218 GO:GO:0030544
BRENDA:6.3.2.19 GO:GO:0034450 eggNOG:NOG260504 HOGENOM:HOG000163725
KO:K09561 CTD:10273 HOVERGEN:HBG053046 OrthoDB:EOG4Z36F9
OMA:QENELHS GO:GO:0031371 GO:GO:0030911 GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 EMBL:AF129086 EMBL:AK002752 EMBL:AK004464
EMBL:AK045776 EMBL:AK166630 EMBL:BC027427 EMBL:BC038939
IPI:IPI00471361 RefSeq:NP_062693.1 UniGene:Mm.277599 PDB:2C2L
PDB:2C2V PDB:3Q47 PDB:3Q49 PDB:3Q4A PDBsum:2C2L PDBsum:2C2V
PDBsum:3Q47 PDBsum:3Q49 PDBsum:3Q4A ProteinModelPortal:Q9WUD1
SMR:Q9WUD1 DIP:DIP-29751N IntAct:Q9WUD1 STRING:Q9WUD1
PhosphoSite:Q9WUD1 PaxDb:Q9WUD1 PRIDE:Q9WUD1
Ensembl:ENSMUST00000044911 GeneID:56424 KEGG:mmu:56424
UCSC:uc008bcf.1 GeneTree:ENSGT00650000093277 InParanoid:Q9WUD1
EvolutionaryTrace:Q9WUD1 NextBio:312582 Bgee:Q9WUD1
CleanEx:MM_STUB1 Genevestigator:Q9WUD1
GermOnline:ENSMUSG00000039615 Uniprot:Q9WUD1
Length = 304
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 31/87 (35%), Positives = 53/87 (60%)
Query: 57 LLFQMDD-HQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVT 115
L Q+D+ + +IP+Y IS ++M++P +GITYDR+ IE L Q + + PVT
Sbjct: 215 LFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL-QRVGHFD-PVT 272
Query: 116 KQPLPKDLDLTPNHTLRRLIQAWCADN 142
+ PL ++ L PN ++ +I A+ ++N
Sbjct: 273 RSPLTQE-QLIPNLAMKEVIDAFISEN 298
>RGD|1306167 [details] [associations]
symbol:Stub1 "STIP1 homology and U-box containing protein 1, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA;ISO]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process"
evidence=IEA;ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019900 "kinase binding" evidence=IEA;ISO] [GO:0030544 "Hsp70
protein binding" evidence=IEA;ISO] [GO:0030579 "ubiquitin-dependent
SMAD protein catabolic process" evidence=IEA;ISO] [GO:0030911 "TPR
domain binding" evidence=IEA;ISO] [GO:0031398 "positive regulation
of protein ubiquitination" evidence=IEA;ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA;ISO] [GO:0031943 "regulation
of glucocorticoid metabolic process" evidence=IEA;ISO] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO] [GO:0042405
"nuclear inclusion body" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0046332 "SMAD binding" evidence=IEA;ISO]
[GO:0051787 "misfolded protein binding" evidence=IEA;ISO]
[GO:0051865 "protein autoubiquitination" evidence=IEA;ISO]
[GO:0051879 "Hsp90 protein binding" evidence=IEA;ISO] [GO:0070534
"protein K63-linked ubiquitination" evidence=IEA;ISO] [GO:0071218
"cellular response to misfolded protein" evidence=IEA;ISO]
[GO:0090035 "positive regulation of chaperone-mediated protein
complex assembly" evidence=IEA;ISO] InterPro:IPR001440
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 RGD:1306167
GO:GO:0005737 GO:GO:0043161 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515 GO:GO:0032436
EMBL:CH473948 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0042405 GO:GO:0071218 GO:GO:0034450 KO:K09561 CTD:10273
OrthoDB:EOG4Z36F9 OMA:QENELHS GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 GeneTree:ENSGT00650000093277 IPI:IPI00203158
RefSeq:NP_001020796.2 UniGene:Rn.6504 Ensembl:ENSRNOT00000026921
GeneID:287155 KEGG:rno:287155 UCSC:RGD:1306167 NextBio:625631
Uniprot:D4A4T0
Length = 304
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 31/87 (35%), Positives = 53/87 (60%)
Query: 57 LLFQMDD-HQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVT 115
L Q+D+ + +IP+Y IS ++M++P +GITYDR+ IE L Q + + PVT
Sbjct: 215 LFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL-QRVGHFD-PVT 272
Query: 116 KQPLPKDLDLTPNHTLRRLIQAWCADN 142
+ PL ++ L PN ++ +I A+ ++N
Sbjct: 273 RSPLTQE-QLIPNLAMKEVIDAFISEN 298
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 95 (38.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 68 EIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLD-LT 126
E P F+CPI+ +M DPV +G T++R S++ N + P DL +
Sbjct: 9 ETPTEFLCPITGFLMSDPVVVASGQTFERISVQVC----RNLSFAPKLHDGTQPDLSTVI 64
Query: 127 PNHTLRRLIQAWCADN 142
PN ++ I +WC N
Sbjct: 65 PNLAMKSTILSWCDRN 80
Score = 84 (34.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 40/175 (22%), Positives = 82/175 (46%)
Query: 247 KIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQIFQNIIRVLKQ 306
KIV S +V L D E + H + L ++ +K + + + + ++ L+
Sbjct: 261 KIVRS-GFVPLLIDVLKSGSTEAQEHVIGALFSLAVEEENKMVIGVLGAV-EPLLHALRS 318
Query: 307 RVIAQQGINAALKLM-LDACPSGRNRMIMVESGAVFELIELELTASEKKTTELILGILFH 365
+ +AAL L L P+ R+R+ V++GAV + L + S + + ++L +L +
Sbjct: 319 SESERARQDAALALYHLSLIPNNRSRL--VKAGAVPMM--LSMIRSGESASRILL-LLCN 373
Query: 366 LCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAI---LILSLICKFSGNFNF 417
L +C++G+ L A ++++ ++ + A D A + +L+ GN F
Sbjct: 374 LAACSEGKGAMLDGNA-VSILVGKLRESGGAESDAAARENCVGALLTLSVGNMRF 427
>UNIPROTKB|E1B7G3 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070534 "protein
K63-linked ubiquitination" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0051787 "misfolded protein binding" evidence=IEA]
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042405 "nuclear inclusion body" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031398
"positive regulation of protein ubiquitination" evidence=IEA]
[GO:0030911 "TPR domain binding" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
[GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0043161
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0032436 GO:GO:0000151
GO:GO:0070534 GO:GO:0051865 GO:GO:0042405 GO:GO:0071218
GO:GO:0034450 OMA:QENELHS GO:GO:0090035 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 EMBL:DAAA02057282 IPI:IPI00714977
Ensembl:ENSBTAT00000025473 ArrayExpress:E1B7G3 Uniprot:E1B7G3
Length = 319
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 31/87 (35%), Positives = 53/87 (60%)
Query: 57 LLFQMDD-HQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVT 115
L Q+D+ + +IP+Y IS ++M++P +GITYDR+ IE L Q + + PVT
Sbjct: 214 LFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL-QRVGHFD-PVT 271
Query: 116 KQPLPKDLDLTPNHTLRRLIQAWCADN 142
+ PL ++ L PN ++ +I A+ ++N
Sbjct: 272 RSPLTQE-QLIPNLAMKEVIDAFISEN 297
>TAIR|locus:2050669 [details] [associations]
symbol:AT2G45910 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
EMBL:AC004665 HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BT002512
EMBL:AK227123 IPI:IPI00542046 PIR:T02456 RefSeq:NP_182115.2
UniGene:At.36571 ProteinModelPortal:Q8GUH1 SMR:Q8GUH1 PRIDE:Q8GUH1
EnsemblPlants:AT2G45910.1 GeneID:819199 KEGG:ath:AT2G45910
GeneFarm:1984 TAIR:At2g45910 InParanoid:Q8GUH1 OMA:KGTFAYM
PhylomeDB:Q8GUH1 ProtClustDB:CLSN2680270 Genevestigator:Q8GUH1
Uniprot:Q8GUH1
Length = 834
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 29/69 (42%), Positives = 38/69 (55%)
Query: 70 PEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNH 129
P YFICPI ++M+DP A G TY+ E+I WL ++ + P+T L L NH
Sbjct: 764 PPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTS--PMTNVKL-SHTSLIANH 820
Query: 130 TLRRLIQAW 138
LR IQ W
Sbjct: 821 ALRSAIQEW 829
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 129 (50.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 67 IEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLT 126
IE P+ FICPIS IM++P A G TY+ + WL G + P+T L ++ +L
Sbjct: 292 IEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKS--PMTNLRL-ENRNLI 348
Query: 127 PNHTLRRLIQAW 138
PN LR I+ W
Sbjct: 349 PNLVLRSAIKDW 360
>FB|FBgn0027052 [details] [associations]
symbol:CHIP "CHIP" species:7227 "Drosophila melanogaster"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0030018 "Z
disc" evidence=IDA] InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 GO:GO:0005737
GO:GO:0043161 EMBL:AE014134 Gene3D:1.25.40.10 GO:GO:0046332
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0051879
GO:GO:0004842 InterPro:IPR013105 Pfam:PF07719 GO:GO:0032436
GO:GO:0000209 GO:GO:0000151 GO:GO:0030544 KO:K09561 OMA:QENELHS
GO:GO:0030911 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 FlyBase:FBgn0027052 EMBL:AF129084
EMBL:AY069760 RefSeq:NP_477441.1 UniGene:Dm.392 SMR:Q9XYW6
IntAct:Q9XYW6 MINT:MINT-316282 STRING:Q9XYW6
EnsemblMetazoa:FBtr0080027 GeneID:34433 KEGG:dme:Dmel_CG5203
UCSC:CG5203-RA CTD:34433 InParanoid:Q9XYW6 GenomeRNAi:34433
NextBio:788473 Uniprot:Q9XYW6
Length = 289
Score = 122 (48.0 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 68 EIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTP 127
E+P++ IS +I+ DPV +GITY+R+ IE L Q + + PVT+ L +D L P
Sbjct: 212 EVPDFLCGKISFEILTDPVITPSGITYERKDIEEHL-QRVGHFD-PVTRVKLTQD-QLIP 268
Query: 128 NHTLRRLIQAWCADNSAYGID 148
N +++ ++ ++ A+N + +D
Sbjct: 269 NFSMKEVVDSFIAENE-WSLD 288
>POMBASE|SPAC20H4.10 [details] [associations]
symbol:ufd2 "ubiquitin-protein ligase E4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 UniPathway:UPA00143 PomBase:SPAC20H4.10 GO:GO:0005634
GO:GO:0005737 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0000151
GO:GO:0034450 KO:K10597 EMBL:AF059906 EMBL:AB027791 EMBL:AB032715
PIR:T43725 RefSeq:NP_593630.1 ProteinModelPortal:Q9HE05
MINT:MINT-4785000 STRING:Q9HE05 EnsemblFungi:SPAC20H4.10.1
GeneID:2542023 KEGG:spo:SPAC20H4.10 HOGENOM:HOG000188621
OMA:NERICKS OrthoDB:EOG4MPMZ8 NextBio:20803102 Uniprot:Q9HE05
Length = 1010
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 32/83 (38%), Positives = 49/83 (59%)
Query: 58 LFQMDDHQDI-EIPEYFICPISLQIMKDPVTAI-TGITYDRESIEHWLFQGNNNAECPVT 115
L + + +D+ +IP+YF+ P+ IMKDPV +GI+ DR +I+ L ++A P
Sbjct: 919 LQEATEEEDMGDIPDYFLDPLMFTIMKDPVVLPRSGISIDRSTIKAHLL---SDATDPFN 975
Query: 116 KQPLPKDLDLTPNHTLRRLIQAW 138
+ PL D D+TPN TLR I +
Sbjct: 976 RTPLTLD-DVTPNDTLREEINTF 997
>TAIR|locus:2079716 [details] [associations]
symbol:CHIP "carboxyl terminus of HSC70-interacting
protein" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009266
"response to temperature stimulus" evidence=IEP;IMP] [GO:0009651
"response to salt stress" evidence=IEP] [GO:0009737 "response to
abscisic acid stimulus" evidence=IMP] [GO:0051087 "chaperone
binding" evidence=IPI] [GO:0007165 "signal transduction"
evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009414 "response to water deprivation" evidence=RCA]
[GO:0009610 "response to symbiotic fungus" evidence=RCA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] [GO:0009733 "response
to auxin stimulus" evidence=RCA] [GO:0009738 "abscisic acid
mediated signaling pathway" evidence=RCA] [GO:0009753 "response to
jasmonic acid stimulus" evidence=RCA] [GO:0042538 "hyperosmotic
salinity response" evidence=RCA] InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00504 UniPathway:UPA00143 GO:GO:0009737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009651 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR013105 Pfam:PF07719 GO:GO:0009266 GO:GO:0000151
EMBL:AC009853 EMBL:AY042807 EMBL:AY064647 IPI:IPI00547964
RefSeq:NP_566305.1 UniGene:At.18421 HSSP:Q9WUD1
ProteinModelPortal:Q9SRS9 SMR:Q9SRS9 STRING:Q9SRS9
EnsemblPlants:AT3G07370.1 GeneID:819925 KEGG:ath:AT3G07370
TAIR:At3g07370 eggNOG:NOG260504 HOGENOM:HOG000163725
InParanoid:Q9SRS9 KO:K09561 OMA:LEWEEES PhylomeDB:Q9SRS9
ProtClustDB:CLSN2688144 Genevestigator:Q9SRS9 Uniprot:Q9SRS9
Length = 278
Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
Identities = 24/78 (30%), Positives = 47/78 (60%)
Query: 62 DDHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESI-EHWLFQGNNNAECPVTKQPLP 120
++ + E+P+Y C I+L+I +DPV + +G+TY+R +I EH G + P+T++ +
Sbjct: 193 EEDKPTEVPDYLCCNITLEIFRDPVISPSGVTYERAAILEHLKKVGKFD---PITREKID 249
Query: 121 KDLDLTPNHTLRRLIQAW 138
+L PN ++ + A+
Sbjct: 250 P-ANLVPNLAIKEAVAAY 266
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.136 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 425 398 0.00097 117 3 11 22 0.48 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 76
No. of states in DFA: 615 (65 KB)
Total size of DFA: 243 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.32u 0.14s 33.46t Elapsed: 00:00:02
Total cpu time: 33.33u 0.14s 33.47t Elapsed: 00:00:02
Start: Fri May 10 11:30:08 2013 End: Fri May 10 11:30:10 2013