BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041408
(425 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SF15|PUB24_ARATH E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24
PE=1 SV=1
Length = 456
Score = 312 bits (800), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 178/413 (43%), Positives = 249/413 (60%), Gaps = 62/413 (15%)
Query: 61 MD-DHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPL 119
MD + ++IEIP YFICPISL+IMKDPVT ++GITYDR++I WL CPVTKQPL
Sbjct: 1 MDQEEEEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWL---EKVPSCPVTKQPL 57
Query: 120 PKDLDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDIWKPELQT--- 176
P D DLTPNH LRRLIQ WC +N G+ RI TP+ P KL +++ IK++ K +
Sbjct: 58 PLDSDLTPNHMLRRLIQHWCVENETRGVVRISTPRVPPGKLNVVEEIKNLKKFGQEALGR 117
Query: 177 -KTLIQLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVG-----GLEGALSILHF 230
+TL +LEV A + NR+ M E GV ++++ ++V C +++ G GL+ +L +LH
Sbjct: 118 EETLQKLEVLAMDG-NNRRLMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLHL 176
Query: 231 FKITSEYMKLSAFEIDKIVESFTWVLALDDESIENHKE---IKSHALRILKNIIQAASSK 287
I S K E D+++ES TWVL H+E K++ + +L+N+ + SS
Sbjct: 177 IGIPSNDAKTILMENDRVMESLTWVL---------HQEDFLSKAYTIVLLRNLTEYTSSH 227
Query: 288 FLQRLKPQIFQNIIRVLKQRV----------------------------------IAQQG 313
++RL P+IF+ II LK V + +Q
Sbjct: 228 IVERLNPEIFKGIIGFLKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLDHSLVIKQA 287
Query: 314 INAALKLMLDACPSGRNRMIMVESGAVFELIELELT-ASEKKTTELILGILFHLCSCADG 372
+ AAL ++L+ RNR ++V+ GAV ELIELE++ EK+ TEL+LG+L LC CA+G
Sbjct: 288 VTAALMILLETSSWSRNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANG 347
Query: 373 RAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICKFSGNFNFVVQEMSRV 425
RA+ L+HR IAVVTKR+++VSPAADDRAI IL+ + KFS N VV+EM V
Sbjct: 348 RAEILAHRGGIAVVTKRLLRVSPAADDRAISILTTVSKFSPE-NMVVEEMVNV 399
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 273 bits (697), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 226/357 (63%), Gaps = 19/357 (5%)
Query: 65 QDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLD 124
++IEIP +F+CPISL+IMKDPV TGITYDR+SIE WLF G N+ CPVTKQ + D D
Sbjct: 8 EEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNS-CPVTKQDI-TDAD 65
Query: 125 LTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDIWKP-ELQTKTLIQLE 183
LTPNHTLRRLIQ+WC N++YG++RIPTP+ P+ K +I KLI+D E Q K L +L
Sbjct: 66 LTPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLR 125
Query: 184 VFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSEYM---KL 240
+EN N++C+ AGVP + + N D + AL++L+ + TSE + L
Sbjct: 126 QIVSENATNKRCLEAAGVPEFLANIVSN--DSENGSLTDEALNLLYHLE-TSETVLKNLL 182
Query: 241 SAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQIFQNI 300
+ + + IV+S T ++ E + +A +LKNI++ A LKP++F +
Sbjct: 183 NNKKDNNIVKSLTKIMQ------RGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEV 236
Query: 301 IRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIEL---ELTASEKKTTE 357
+++L R I+Q+ AA+ ++++ CP GRNR VE+G + +IEL E SE++ E
Sbjct: 237 VQILDDR-ISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPE 295
Query: 358 LILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICKFSGN 414
+ + +L LC CA+GRA+FL+H AAIAVV K+I++VS A DRA+ +L + +F
Sbjct: 296 MAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCAT 352
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 229/391 (58%), Gaps = 43/391 (10%)
Query: 65 QDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLD 124
Q+IEIP +F+CPISL IMKDPV TGITYDRESIE WLF G N+ CPVTKQ + + D
Sbjct: 3 QEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNS-CPVTKQVI-TETD 60
Query: 125 LTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDIWKPEL-QTKTLIQLE 183
LTPNHTLRRLIQ+WC N++YGI+RIPTPK P+ K +I KLIK+ L Q K L +L
Sbjct: 61 LTPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLR 120
Query: 184 VFAAENERNRKCMAEAGVPRAMLTYIVNC-------------------CDKNQVGG---- 220
+EN N++C+ A VP + + N C N +
Sbjct: 121 QIVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFDS 180
Query: 221 ----LEGALSILHFFKITSEYMK--LSAFEIDKIVESFTWVLALDDESIENHKEIKSHAL 274
++ ALS+L+ + +K L+ + +V++ T ++ E +++A
Sbjct: 181 SRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQ------RGIYESRAYAA 234
Query: 275 RILKNIIQAASSKFLQRLKPQIFQNIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIM 334
+LK +++ A + L+ ++F +I++L + I+ + +A+++++ CP GRNR
Sbjct: 235 LLLKKLLEVADPMQIILLERELFGEVIQILHDQ-ISHKATRSAMQILVITCPWGRNRHKA 293
Query: 335 VESGAVFELIEL---ELTASEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIM 391
VE G + +IEL + +SE++ +E+ + +L LC CA+GRA+FL+H AAIAVV+K+I+
Sbjct: 294 VEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKIL 353
Query: 392 QVSPAADDRAILILSLICKFSGNFNFVVQEM 422
+VS +RA+ +L + +F + +QEM
Sbjct: 354 RVSQITSERAVRVLLSVGRFCATPSL-LQEM 383
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 176/351 (50%), Gaps = 16/351 (4%)
Query: 67 IEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLT 126
I+IP +F CPISL++M+DPVT TG TYDR SIE W+ GNN CPVT+ PL D L
Sbjct: 12 IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTT-CPVTRAPL-SDFTLI 69
Query: 127 PNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKD---IWKPELQTKT----L 179
PNHTLRRLIQ WC N + G++RIPTPK P + L+ I + ++ L
Sbjct: 70 PNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAAL 129
Query: 180 IQLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSEYMK 239
+L FA ++++NR +A ++ + + +++ + +L++L IT
Sbjct: 130 RRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSEL--VSESLALLVMLPITEPNQF 187
Query: 240 LSAFEIDKIVESFTWVLALDDESIENHKEIKSHAL-RILKNIIQAASSKFLQRLKPQIFQ 298
+S VE T +L D SIE + + AL I+ ++A K +F+
Sbjct: 188 VSISSDPGRVEFLTRLLF--DSSIETR--VNAAALIEIVSTGTKSADLKGSISNSESVFE 243
Query: 299 NIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTEL 358
++ +L+ + +++ + +K + C R I + +GA LI+ ++ TE
Sbjct: 244 GVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTER 303
Query: 359 ILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLIC 409
L + LC +G A F H + ++ K I++VS A + A L +C
Sbjct: 304 ALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALC 354
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 138 bits (348), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 171/359 (47%), Gaps = 30/359 (8%)
Query: 67 IEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLT 126
I+IP +F CPISL +M DPVT TG TYDR SI+ W+ GN CPVT+ L D L
Sbjct: 12 IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTT--CPVTRVAL-SDFTLI 68
Query: 127 PNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKD---IWKPELQTKT----L 179
PNHTLRRLIQ WC N + G++RIPTPK P + + L+ I + ++ +
Sbjct: 69 PNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAI 128
Query: 180 IQLEVFAAENERNRKCMAEAGVPRAMLTYIV------NCCDKNQVGGLEGALSILHFFKI 233
+L A ++E+NR +A R +L I+ V L +LH +
Sbjct: 129 RRLRGLARDSEKNRVLIAGHNA-REILVRILFADIETTSLSSELVSESLALLVLLHMTET 187
Query: 234 TSEYMKLSAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASS---KFLQ 290
E A D F L L D SI EI+ +A +++ ++ A S K +
Sbjct: 188 ECE-----AVASDPSRVGFMTRL-LFDSSI----EIRVNAAALIEMVLTGAKSMDLKLII 237
Query: 291 RLKPQIFQNIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTA 350
IF+ ++ +LK + +++ + +K + C + R + + +GA LI+
Sbjct: 238 SGSDSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAAD 297
Query: 351 SEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLIC 409
++ TE L + LC +G A F H + ++ K I++VS A + A L +C
Sbjct: 298 FDRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALC 356
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 128 bits (322), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 169/371 (45%), Gaps = 57/371 (15%)
Query: 66 DIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDL 125
+I IP F CPIS ++MKDPV +GITYDRE+IE W G CPVT L L+
Sbjct: 30 EITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQT--CPVTNTVLT-SLEQ 86
Query: 126 TPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDIWKPELQT------KTL 179
PNHT+RR+IQ WC + GI+RIPTP+ P++ Q+ ++ + + + + +
Sbjct: 87 IPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMV 146
Query: 180 IQLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSEYMK 239
++ E+ERNRKC+ E G L + F SE
Sbjct: 147 TKMTRLGKESERNRKCVKENG----------------------AGLVLCVCFDAFSENAN 184
Query: 240 LSAFEIDKIVESFTWVL--ALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQIF 297
S +++ V TW+L L+ +S + + +L+N Q A+ FL +K +
Sbjct: 185 ASLL-LEETVSVLTWMLPIGLEGQSKLTTTSSFNRLVELLRNGDQNAA--FL--IKELLE 239
Query: 298 QNIIRVLKQRVIAQQGINAALKLMLDACPSGRN------RMIMVESGAVFELIELELTA- 350
N+ V + G+ A ++ + N MI+ V +EL+L
Sbjct: 240 LNVTHV--HALTKINGVQEAFMKSINRDSTCVNSLISIHHMILTNQETVSRFLELDLVNI 297
Query: 351 -------SEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAIL 403
SE E L +L +C +GR + ++ I ++ K+I+++S D +
Sbjct: 298 TVEMLVDSENSVCEKALTVLNVICETKEGREKVRRNKLVIPILVKKILKISEKKD--LVS 355
Query: 404 ILSLICKFSGN 414
++ +CK SG+
Sbjct: 356 VMWKVCK-SGD 365
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 177/388 (45%), Gaps = 58/388 (14%)
Query: 60 QMDDHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPL 119
+ + +I IP F CPIS+ +MKDPV TGITYDR SIE W+ GN CPVT L
Sbjct: 22 ESEPESEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKT--CPVTNTVL 79
Query: 120 PKDLDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQII----KLIKDIWKPELQ 175
D PNHT+R++IQ WC + + I RIPTP+ PL ++ KL + + +
Sbjct: 80 -TTFDQIPNHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYE 138
Query: 176 TKTLI--QLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKI 233
+I +++ E+E+NRKC+ E V + +C DK G E K+
Sbjct: 139 KCGVIIEKIKKLGDESEKNRKCVNENSVGWVL----CDCFDK--FSGDE---------KL 183
Query: 234 TSEYMKLSAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLK 293
T F +++I+ TW+ + E I K + + R + ++++ Q
Sbjct: 184 T--------FMLNEILSLLTWMFPIGLEGI--SKLASATSFRCVAGLLKSTDDSVRQN-A 232
Query: 294 PQIFQNIIRVLKQRV---IAQQGINAAL-KLMLDACPSGRN--------RMIMVESGAVF 341
I + I+ + + RV + G+ AL KL+ D+ S +M++ +
Sbjct: 233 AFIMKEILSLDETRVHSFAVENGVAEALVKLIRDSVSSSSTKSSLIAIYQMVLQKPEIAS 292
Query: 342 ELIELELTA--------SEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQV 393
E +E+ L + +E E L +L +C GR + + + ++ K+I +V
Sbjct: 293 EFLEIGLVSITVEMIVDAENSVCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKV 352
Query: 394 SPAADDRAILILSLICKFSGNFNFVVQE 421
S A + +S+I K N V E
Sbjct: 353 SELATRSS---MSMILKLWKTGNTVAVE 377
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 85/179 (47%), Gaps = 11/179 (6%)
Query: 31 IKLLLSESRSRTHKQKPQQQHIIILSLLFQMDDHQDIEIPEYFICPISLQIMKDPVTAIT 90
+ +LL + + Q P + +L D + I IP+ F CPISL++MKDPV T
Sbjct: 235 MSMLLKKIKDFVQTQNPDMGPPMASRVLDSNGDSRPITIPDEFRCPISLELMKDPVIVST 294
Query: 91 GITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNHTLRRLIQAWCADNSAYGIDRI 150
G TY+R IE W+ G++ CP T+Q + LTPN+ LR LI WC N R
Sbjct: 295 GQTYERACIEKWIASGHHT--CPTTQQKMSTSA-LTPNYVLRSLISQWCETNGMEPPKRS 351
Query: 151 PTPKAPL------SKLQIIKLIKDIWKP--ELQTKTLIQLEVFAAENERNRKCMAEAGV 201
P P + I L+ + P E Q +L + A N NR C+AEAG
Sbjct: 352 TQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGA 410
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 85/179 (47%), Gaps = 11/179 (6%)
Query: 31 IKLLLSESRSRTHKQKPQQQHIIILSLLFQMDDHQDIEIPEYFICPISLQIMKDPVTAIT 90
+ +LL + + Q P + +L D + I IP+ F CPISL++MKDPV T
Sbjct: 235 MSMLLKKIKDFVQTQNPDMGPPMASRVLDSNGDSRPITIPDEFRCPISLELMKDPVIVST 294
Query: 91 GITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNHTLRRLIQAWCADNSAYGIDRI 150
G TY+R IE W+ G++ CP T+Q + LTPN+ LR LI WC N R
Sbjct: 295 GQTYERACIEKWIASGHHT--CPTTQQKMSTSA-LTPNYVLRSLISQWCETNGMEPPKRS 351
Query: 151 PTPKAPL------SKLQIIKLIKDIWKP--ELQTKTLIQLEVFAAENERNRKCMAEAGV 201
P P + I L+ + P E Q +L + A N NR C+AEAG
Sbjct: 352 TQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGA 410
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 168/353 (47%), Gaps = 22/353 (6%)
Query: 67 IEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLT 126
I +P +F CPISL +M+ PV+ TG+TYDR SI+ WL GNN CP T Q L K D
Sbjct: 10 ITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNT--CPATMQ-LLKTKDFV 66
Query: 127 PNHTLRRLIQAWCAD-----NSAYGIDRIPTPKAPLSKLQIIKLIKDIWKPELQTKTLIQ 181
PN TL+RLI W N + P+ + +K ++ L++ + + + L++
Sbjct: 67 PNLTLQRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERL----MSLENLMK 122
Query: 182 LEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSEYMKLS 241
+ F +++ NR+ +++ ML I+ K ++ + A+ IL K+ E +
Sbjct: 123 IVRFVKDSDSNREFLSKKMEFVPMLVDIIR-TKKTKIELVIMAIRILDSIKVDRERLSNL 181
Query: 242 AFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQIFQNII 301
D +LA+ ++E+ K ++R+L I A SK + + + ++
Sbjct: 182 MLANDGGDCLTAILLAIQRGNLES----KIESVRVLDWISFDAKSKLMIAERDGVLTEMM 237
Query: 302 RVLKQRVIAQQG-INAALKLMLDACPSGRNRMIMVESGAVFELIELELTA--SEKKTTEL 358
+ + + I A+L ++ S R R ++ + A+ ++ ++ LT + TE
Sbjct: 238 KSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNVAVTEK 297
Query: 359 ILGILFHLCSCADGRAQFLSHRAAIAV--VTKRIMQVSPAADDRAILILSLIC 409
L +L L S +GR + V V K++++VS A + A+ IL +C
Sbjct: 298 SLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLC 350
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 166/356 (46%), Gaps = 23/356 (6%)
Query: 62 DDHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPK 121
DD +P +F CPISL +MK PV+ TG+TYDR SI+ WL GNN CP T Q L +
Sbjct: 4 DDLYITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNT--CPATMQIL-Q 60
Query: 122 DLDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIK-DIWKPELQTKTLI 180
+ + PN TL RLI W + I+R ++P S I I + ++
Sbjct: 61 NKEFVPNLTLHRLIDHW-----SDSINRRADSESPESDTPTRDEINAAIERFRIENDARS 115
Query: 181 QLEVFAAENERNRKCMAEAGVPRAMLTYIV----NCCDKNQVGGLEGALSILHFF-KITS 235
++ FA E++ NR+ +A AML ++ N D +Q+ + A+ IL +
Sbjct: 116 KILRFARESDENREFLAGKDDFVAMLVDLISDSRNFSD-SQLLLVGEAVKILSMIRRKIF 174
Query: 236 EYMKLSAFEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQ 295
+ +LS + + T L + ++K +L+ I A SK +
Sbjct: 175 DRRRLSNLILTNGGDCLTSFFLLIK---RGNPKLKIDCSAVLEFIAVDAESKLIIAKGEG 231
Query: 296 IFQNIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELT--ASEK 353
+ II+++ + I A L L++ S R ++ ++ V +L L LT +
Sbjct: 232 LVTEIIKLISSDSDSSL-IEANLSLLIAIASSKRVKLALIREKLVTKLTSL-LTDPTTSV 289
Query: 354 KTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLIC 409
TE L +L + SC +GR++ + + V ++M+VS AA + A+ +L +C
Sbjct: 290 SVTEKCLKLLEAISSCKEGRSE-ICDGVCVETVVNKLMKVSTAATEHAVTVLWSVC 344
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 165/350 (47%), Gaps = 21/350 (6%)
Query: 63 DHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKD 122
D QDI P FICPISL+ M+DPVT TG TY+R +I W G + CP T Q L D
Sbjct: 60 DLQDI--PSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLG--HLTCPTTMQELWDD 115
Query: 123 LDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDIWKPELQTKTLIQL 182
+TPN TL LI W + Y + + + ++I+ +K K + + L +L
Sbjct: 116 -TVTPNKTLHHLIYTWFSQK--YVLMKKRSEDVQGRAIEILGTLKKA-KGQARVHALSEL 171
Query: 183 EVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSEYMKLSA 242
+ + RK + E G ++++ ++ + VG A+ + S+ +
Sbjct: 172 KQIVIAHLMARKTVVEEG-GVSVISSLLGPFTSHAVGSEVVAILVSLDLDSDSKSGLMQP 230
Query: 243 FEIDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQIFQNIIR 302
++ IV+ L+D S E K + R+++ +++ + + ++R
Sbjct: 231 AKVSLIVD------MLNDGS----NETKINCARLIRGLVEEKGFRAELVSSHSLLVGLMR 280
Query: 303 VLKQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTELILGI 362
++K + + G++ AL+L+ + R +MV GAV +L+++ L + + + EL L +
Sbjct: 281 LVKDKR-HRNGVSPALRLLKPISVHKQVRSLMVSIGAVPQLVDI-LPSLDPECLELALFV 338
Query: 363 LFHLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICKFS 412
L LC+ +GR I + +M+VS + A+ IL +CK +
Sbjct: 339 LDALCTDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYALSILWSVCKLA 388
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 64 HQ---DIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLP 120
HQ D IP F CPI+L++M+DPV TG TYDRESI+ W+ G+N CP T Q L
Sbjct: 266 HQSLSDANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNT--CPKTGQVL- 322
Query: 121 KDLDLTPNHTLRRLIQAWCADN-------SAYGIDRIPTPKA-PLSKLQIIKLIKDIWKP 172
K L PN L+ LI WC D G + P +A +K+ + LI+ +
Sbjct: 323 KHTSLVPNRALKNLIVLWCRDQKIPFELYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVA 382
Query: 173 ELQTKTLIQLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSI 227
+ + +L A + R C+AEAG ++ Y+ C Q+ + L++
Sbjct: 383 D-SNGVVFELRALAKSDTVARACIAEAGAIPKLVRYLATECPSLQINAVTTILNL 436
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 151/349 (43%), Gaps = 66/349 (18%)
Query: 69 IPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPN 128
IP+ F CPISL++M+DPV +G TY+R IE W+ G++ CP T+Q L LTPN
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHST--CPKTQQAL-TSTTLTPN 312
Query: 129 HTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKL-----------IKDI-WK----- 171
+ LR LI WC N I PK P S L+ K+ I+D+ W+
Sbjct: 313 YVLRSLIAQWCEAND------IEPPKPP-SSLRPRKVSSFSSPAEANKIEDLMWRLAYGN 365
Query: 172 PELQTKTLIQLEVFAAENERNRKCMAEAG---------------VPRAMLTYIVN--CCD 214
PE Q ++ + A N NR +AEAG + +T ++N C+
Sbjct: 366 PEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICE 425
Query: 215 KNQ-----VGGLEGALSILHFFKITS-EYMKLSAFEIDKIVESFTWVLALD--------- 259
N+ G + G + +L + + E + F + I E+ + AL
Sbjct: 426 NNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLL 485
Query: 260 DESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQIFQNIIRVLKQRVIAQQGINAALK 319
+E + K+ + AL L I Q K ++ + + R+L + A+
Sbjct: 486 NEGTQRGKKDAATALFNL-CIYQGNKGKA---IRAGVIPTLTRLLTEPGSGMVDEALAIL 541
Query: 320 LMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTELILGILFHLCS 368
+L + P G + I+ S AV L+E T S + E +L HLCS
Sbjct: 542 AILSSHPEG--KAIIGSSDAVPSLVEFIRTGS-PRNRENAAAVLVHLCS 587
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 165/346 (47%), Gaps = 21/346 (6%)
Query: 68 EIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTP 127
EIP FICPISL+ M+DPVT TG TY+R +I W G + CP T Q L DL +TP
Sbjct: 59 EIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIG--HCTCPTTMQELWDDL-VTP 115
Query: 128 NHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDIWKPELQTKTLIQL-EVFA 186
N TL +LI W + Y + + + ++I+ ++ K + + L +L +V
Sbjct: 116 NKTLHQLIYTWFSQK--YVLMKKRSEDVQGRAIEILGTLRKA-KGKAKVHALSELKQVVM 172
Query: 187 AENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSEYMKLSAFEID 246
A + + E GV +++ +++ + VG A++IL ++ S+ S +
Sbjct: 173 AHAIAKKTVVDEGGV--FVISSLLSPFTSHAVG--SEAIAILVNLELDSD----SKAGLM 224
Query: 247 KIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQIFQNIIRVLKQ 306
+ V L+D SIE K + R++ +++ + + ++R++K
Sbjct: 225 QPARVSLMVDMLNDGSIET----KINCARLIGRLVEEKGFRAELVSSHSLLVGLMRLVKD 280
Query: 307 RVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTELILGILFHL 366
R + G++ AL L+ + R ++V GAV +L+++ L + + E L +L L
Sbjct: 281 RR-RRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDV-LPCLDVECLESALFVLDSL 338
Query: 367 CSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICKFS 412
C ++GR I + +M+VS + AI IL +CK +
Sbjct: 339 CLESEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCKLA 384
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 78/153 (50%), Gaps = 22/153 (14%)
Query: 64 HQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDL 123
H+ IPEYF CPISL++MKDPV TG TY+R SI+ WL G+ CP +++ L
Sbjct: 243 HRSPVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKT--CPKSQETLLH-A 299
Query: 124 DLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQI-------------IKLIKDI- 169
LTPN+ L+ LI WC N GI+ +P + +I + L++ +
Sbjct: 300 GLTPNYVLKSLIALWCESN---GIE-LPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLA 355
Query: 170 -WKPELQTKTLIQLEVFAAENERNRKCMAEAGV 201
E Q +L + A N NR C+AEAG
Sbjct: 356 NGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGA 388
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 67 IEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLT 126
I +P +F CPISL +MK PV+ TG+TYDR SI+ WL GNN CP T Q L ++ D
Sbjct: 8 ITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNT--CPATMQIL-QNKDFI 64
Query: 127 PNHTLRRLIQAW 138
PN TL+RLI+ W
Sbjct: 65 PNRTLQRLIEIW 76
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 6/136 (4%)
Query: 69 IPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPN 128
+P F+CPI+L+IM DPV TG TY++ESI+ W G+ CP T+Q L L L PN
Sbjct: 290 LPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKT--CPKTRQELDH-LSLAPN 346
Query: 129 HTLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQIIKLIKDIWKP---ELQTKTLIQLEVF 185
L+ LI WC N+ ++ +P + + + L+ + E Q +++ Q+ +
Sbjct: 347 FALKNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLL 406
Query: 186 AAENERNRKCMAEAGV 201
A EN NR +A AG
Sbjct: 407 ARENPENRVLIANAGA 422
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 161/382 (42%), Gaps = 61/382 (15%)
Query: 64 HQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDL 123
H+ IP+ F CPISL++M+DPV +G TY+R I+ WL G+ CP T+QPL
Sbjct: 223 HRSPIIPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKT--CPKTQQPL-SHT 279
Query: 124 DLTPNHTLRRLIQAWC-------ADNSAYGIDRIPTPKAPLSKLQIIKLIKDI--WKPEL 174
LTPN L+ LI WC N D+ + ++ L+ + +
Sbjct: 280 SLTPNFVLKSLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDE 339
Query: 175 QTKTLIQLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSIL------ 228
Q ++ + A N NR C+AEAG + +VN + E A++ L
Sbjct: 340 QRAAAGEIRLLAKRNVNNRICIAEAGA----IPLLVNLLSSSDPRTQEHAVTALLNLSIH 395
Query: 229 ----------HFFKITSEYMKLSAFEIDKIVESFTWVLALDDESIENHKEIK-SHALRIL 277
H E +K + E + + + L++ D EN I + A+ L
Sbjct: 396 ENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVD---ENKVTIGAAGAIPPL 452
Query: 278 KNIIQAASSKFLQRLKPQIFQ------NIIRVLKQRVI----------AQQGINAALKLM 321
N++ S + + IF N +R +K ++ I+ AL L+
Sbjct: 453 INLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLL 512
Query: 322 --LDACPSGRNRMIMVESGAVFELIELELTASEKKTTELILGILFHLCSCADGRAQFLSH 379
L P G ++++ S + L+E+ T S + E IL+ LCS AD Q L+
Sbjct: 513 SILAGNPEG--KIVIARSEPIPPLVEVIKTGS-PRNRENAAAILWLLCS-ADTE-QTLAA 567
Query: 380 RAAIAVVTKRIMQVSPAADDRA 401
+A A V + ++S DRA
Sbjct: 568 KA--AGVEDALKELSETGTDRA 587
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 164/378 (43%), Gaps = 46/378 (12%)
Query: 56 SLLFQMDDHQDIEIP-EYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPV 114
SL DD +D+ IP E F CPISL++M DPV +G TY+RE I+ WL G + CP
Sbjct: 242 SLPKSRDDDRDMLIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGG--HLTCPK 299
Query: 115 TKQPLPKDLDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAP------------------ 156
T++ L D+ +TPN+ LR LI WC N I PK P
Sbjct: 300 TQETLTSDI-MTPNYVLRSLIAQWCESNG------IEPPKRPNISQPSSKASSSSSAPDD 352
Query: 157 -LSKLQIIKLIKDIWKPELQTKTLIQLEVFAAENERNRKCMAEAG-VPRAMLTYIVNCCD 214
+K++ + L +PE + ++ + A +N NR +A +G +P + ++
Sbjct: 353 EHNKIEELLLKLTSQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDS 412
Query: 215 KNQVGGLEGALSILHFFKITSEYMKLSAFEIDKIVESFTWVLALDDESIENHKEIKSHAL 274
+ Q E A++ + I E KIV S V + + E + +A
Sbjct: 413 RTQ----EHAVTSILNLSICQENKG-------KIVYSSGAVPGIVHVLQKGSMEARENAA 461
Query: 275 RILKNIIQAASSKFLQRLKPQIFQNIIRVLKQRVIAQQGINAALKLMLDACPSGRNRMIM 334
L ++ +K I ++ +L + +Q+G A + + C N+
Sbjct: 462 ATLFSLSVIDENKVTIGAAGAI-PPLVTLLSEG--SQRGKKDAATALFNLCIFQGNKGKA 518
Query: 335 VESGAVFELIELELTASEKKTTELILGILFHLCSCADGRAQFLSHRAAIAVVTKRIMQVS 394
V +G V L+ L LT E + L IL L S DG+++ + A+ V+ I S
Sbjct: 519 VRAGLVPVLMRL-LTEPESGMVDESLSILAILSSHPDGKSE-VGAADAVPVLVDFIRSGS 576
Query: 395 PAADDRAILILSLICKFS 412
P + + +L +C ++
Sbjct: 577 PRNKENSAAVLVHLCSWN 594
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 6/81 (7%)
Query: 62 DDHQ---DIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQP 118
DD Q ++ IPE F+CPISL++MKDP TG TY+R I+ W+ G N CP T+Q
Sbjct: 233 DDSQKSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCG--NLSCPKTQQK 290
Query: 119 LPKDLDLTPNHTLRRLIQAWC 139
L ++ LTPN+ LR LI WC
Sbjct: 291 L-ENFTLTPNYVLRSLISQWC 310
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Query: 67 IEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLT 126
+ IP F+CP+SL++MKDPV TG TY+R I+ W+ G N CP T+Q L ++ LT
Sbjct: 239 LTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCG--NLTCPKTQQKL-ENFTLT 295
Query: 127 PNHTLRRLIQAWCADNS 143
PN+ LR LI WCA+++
Sbjct: 296 PNYVLRSLISRWCAEHN 312
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 63 DHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKD 122
D +P+ F CPISL +M+DPV A TG TYDR SI W+ +G++ CP + Q L D
Sbjct: 291 DDTSFSVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHST--CPNSGQTL-AD 347
Query: 123 LDLTPNHTLRRLIQAWCADNSAYGI 147
L PN LR LI WC YG+
Sbjct: 348 HRLVPNRALRSLISQWCG---VYGL 369
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 70 PEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNH 129
PE CPISLQ+M DPV +G TY+R IE W G+N+ CP T+Q LP L LTPN+
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNS--CPKTQQQLPH-LSLTPNY 332
Query: 130 TLRRLIQAWCADNSAYGIDRIPTPKAPLSKLQI 162
++ LI +WC N I P P L +
Sbjct: 333 CVKGLIASWCEQNG------ITVPTGPPESLDL 359
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 154/360 (42%), Gaps = 28/360 (7%)
Query: 68 EIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTP 127
++P F CPISL+IM DPV +G T+DR SI+ W+ GN CP+TK PL + L P
Sbjct: 4 DLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRT--CPITKLPLSETPYLIP 61
Query: 128 NHTLRRLIQAWCADNSAYGIDRIPTPKA---PLSKLQIIKLIKDIWKPELQTKTLIQLEV 184
NH LR LI + A S R T + S+ I L+ + ++L +L
Sbjct: 62 NHALRSLILNF-AHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVR 120
Query: 185 FAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFFKITSEYMKLSAFE 244
+ R+ + E+G RA L + +C NQV L+ L + K+
Sbjct: 121 LTKRDSSIRRKVTESGAVRAALDCVDSC---NQV--LQEKSLSLLLNLSLEDDNKV-GLV 174
Query: 245 IDKIVESFTWVLALDDESIENHKEIKSHALRILKNIIQAASSKFLQRLKPQIFQNIIRVL 304
D ++ VL + + K+ A +L ++ +K P ++ +L
Sbjct: 175 ADGVIRRIVTVLRV------GSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLL 228
Query: 305 KQRVIAQQGINAALKLMLDACPSGRNRMIMVESGAVFELIELELTASEKKTTELILGILF 364
+ ++ +A L + P R R +V+ G+V L+E + E+ +LG+L
Sbjct: 229 RVGNDRERKESATALYALCSFPDNRKR--VVDCGSVPILVEAADSGLERAVE--VLGLLV 284
Query: 365 HLCSCADGRAQFLSHRAAIAVVTKRIMQVSPAADDRAILILSLICKFSGNFNFVVQEMSR 424
C GR + + V+ + + ++ IL+ +C SG +V E+ R
Sbjct: 285 K---CRGGREEMSKVSGFVEVLVNVLRNGNLKGIQYSLFILNCLCCCSGE---IVDEVKR 338
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 73/153 (47%), Gaps = 24/153 (15%)
Query: 67 IEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLT 126
I +P+ F+CPISL +M DPV TG TYDR SI W+ +G + CP T Q L D +
Sbjct: 303 ITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEG--HCTCPKTGQML-MDSRIV 359
Query: 127 PNHTLRRLIQAWCADNSAYGI---------------DRIPTPKA-PLSKLQIIKLIKDIW 170
PN L+ LI WC +A GI +PT A +K + LIK +
Sbjct: 360 PNRALKNLIVQWC---TASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLA 416
Query: 171 KPELQTKTLIQLEV--FAAENERNRKCMAEAGV 201
+T+ E+ A + NR +AEAG
Sbjct: 417 DGSQAAQTVAAREIRLLAKTGKENRAYIAEAGA 449
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 70 PEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNH 129
PE CPISLQ+M DPV +G TY+R IE W G+N CP T+Q LP + LTPN+
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNT--CPKTQQQLPH-ISLTPNN 329
Query: 130 TLRRLIQAWCADNS 143
++ LI +WC N
Sbjct: 330 CVKGLIASWCEQNG 343
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 70 PEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNH 129
P+ F+CPI+ QI DPVT TG TY+R++I+ WL GN CP+T+QPL + N+
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTT--CPITRQPLSASILPKTNY 569
Query: 130 TLRRLIQAWCADNS--AYGIDRIPTPKA 155
L+RLI +W N A + TP+
Sbjct: 570 VLKRLITSWKEQNPELAQEFSNVNTPRG 597
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 70 PEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNH 129
P+ F+CPI+ QI DPVT TG TY+R++I+ WL GN CP+T+QPL + N+
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTT--CPITRQPLSASILPKTNY 569
Query: 130 TLRRLIQAWCADNS--AYGIDRIPTPKA 155
L+RLI +W N A + TP+
Sbjct: 570 VLKRLITSWKEQNPELAQEFSNVNTPRG 597
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 70 PEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNH 129
P+ F+CPI+ QI DPVT TG TY+R++I+ WL G N CP+T+Q L ++ N+
Sbjct: 514 PKDFVCPITGQIFSDPVTLETGQTYERKAIQEWL--GTGNTTCPITRQALSANILPKTNY 571
Query: 130 TLRRLIQAWCADN 142
L+RLI +W N
Sbjct: 572 VLKRLIVSWKEQN 584
>sp|Q9SFX2|PUB43_ARATH U-box domain-containing protein 43 OS=Arabidopsis thaliana GN=PUB43
PE=2 SV=1
Length = 811
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 38/193 (19%)
Query: 69 IPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAE---CPVTKQPLPKDLDL 125
I E FICP++ Q+M +PVT G T++RE+IE W + N + CP+T + L DL
Sbjct: 25 IYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKEL-SITDL 83
Query: 126 TPNHTLRRLIQAWCADNSAYGID---------------------------RIPTPKAPLS 158
+P+ LR I+ W A N A +D I + +
Sbjct: 84 SPSIALRNTIEEWRARNDALKLDIARQSLYLGNAETNILLALKNVREICRNIRKIRQRVC 143
Query: 159 KLQIIKLIKDIWKP---ELQTKTLIQLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDK 215
Q+++LI D+ K E++ K L L+V +E ++ +AE R ++ ++ K
Sbjct: 144 NPQLVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLSQEPSK 203
Query: 216 NQVGGLEGALSIL 228
G E A+S+L
Sbjct: 204 ----GREAAVSVL 212
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 70 PEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNH 129
PE CPISLQ+M DPV +G TY+R IE W G+N CP T Q L L LTPN+
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNT--CPKTHQQL-SHLCLTPNY 336
Query: 130 TLRRLIQAWCADNSAYGIDRIP 151
++ LI +WC N D P
Sbjct: 337 CVKALISSWCEQNGVQVPDGPP 358
>sp|Q683D5|PUB37_ARATH U-box domain-containing protein 37 OS=Arabidopsis thaliana GN=PUB37
PE=2 SV=1
Length = 400
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 62 DDHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPK 121
D+H+ E P+YFICPISL++MKDP A G TY+ E+I WL G+ + P+T L
Sbjct: 320 DEHR--EAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETS--PMTNTKL-H 374
Query: 122 DLDLTPNHTLRRLIQAWCADNSAY 145
L PN LR IQ W +S++
Sbjct: 375 HTKLVPNLALRSAIQEWLHASSSF 398
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 65 QDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLD 124
+ + PE F CP+S ++M+DPV +G TYD+ I+ WL GN CP T+Q LP
Sbjct: 70 ETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRT--CPKTQQVLPHTA- 126
Query: 125 LTPNHTLRRLIQAWCADNS 143
LTPN +R +I WC N
Sbjct: 127 LTPNLLIREMISKWCKKNG 145
>sp|P0C6E7|PUB55_ARATH Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana
GN=PUB55 PE=3 SV=1
Length = 568
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 59 FQMDDHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQP 118
F +D + P YFICPIS ++M++P A G TY+ ES+ WL G+ + P+T
Sbjct: 487 FSDEDSVTRQPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETS--PMTNLK 544
Query: 119 LPKDLDLTPNHTLRRLIQAWCADNS 143
L + +L PNH LR IQ W NS
Sbjct: 545 LAHN-NLVPNHALRSAIQEWLQRNS 568
>sp|Q5ZMC3|WSDU1_CHICK WD repeat, SAM and U-box domain-containing protein 1 OS=Gallus
gallus GN=WDSUB1 PE=2 SV=2
Length = 476
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 67 IEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLT 126
+ +P+ F+CPI+ ++MKDPV A G +Y++E++E+W+ NN P+T PLP L LT
Sbjct: 402 VAVPDEFLCPITRELMKDPVIAADGYSYEKEAMENWI--SNNRRSSPMTNLPLPS-LVLT 458
Query: 127 PNHTLRRLIQAW 138
PN TL+ I W
Sbjct: 459 PNRTLKMAISRW 470
>sp|Q9FGD7|PUB50_ARATH Putative U-box domain-containing protein 50 OS=Arabidopsis thaliana
GN=PUB50 PE=3 SV=1
Length = 765
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 61 MDDHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLP 120
MD+ +IP F+CPI ++MK+P A G +Y+ E+I+ WL G++ + P+T L
Sbjct: 681 MDEGDPNDIPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDTS--PMTNLRLD 738
Query: 121 KDLDLTPNHTLRRLIQAWCADNSA 144
+ LTPNHTLR LIQ W + +A
Sbjct: 739 YQM-LTPNHTLRSLIQDWHSKRAA 761
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 65 QDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLD 124
+ I IP YF CP+S ++M DPV +G T+DR SI+ WL N A CP T+Q L +
Sbjct: 234 KGISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWL--DNGLAVCPRTRQVLTHQ-E 290
Query: 125 LTPNHTLRRLIQAWCADN 142
L PN+T++ +I +W N
Sbjct: 291 LIPNYTVKAMIASWLEAN 308
>sp|Q3E9F5|PUB48_ARATH U-box domain-containing protein 48 OS=Arabidopsis thaliana GN=PUB48
PE=2 SV=1
Length = 456
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 63 DHQDIEIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKD 122
D +E+P+ F C +S IM DPV +G TY++ I WL N++ CP KQ L +
Sbjct: 68 DSSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWL---NHDLTCPTAKQVLYR- 123
Query: 123 LDLTPNHTLRRLIQAWCADNSAYGIDRIPTPK 154
+ LTPNH + LI WC N DR P PK
Sbjct: 124 VCLTPNHLINELITRWCLANK---YDR-PAPK 151
>sp|Q9LQ92|PUB54_ARATH U-box domain-containing protein 54 OS=Arabidopsis thaliana GN=PUB54
PE=2 SV=1
Length = 308
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 71 EYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNHT 130
E F CPIS++IM+DP A G TY+ E WL G + P T +PL ++ +L PNHT
Sbjct: 235 EDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTS--PKTNKPL-ENHNLVPNHT 291
Query: 131 LRRLIQAWCADNSAY 145
LR +I+ W N Y
Sbjct: 292 LRIIIKDWLEKNPNY 306
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 87/190 (45%), Gaps = 25/190 (13%)
Query: 71 EYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNHT 130
E +CPISL+IM DPV TG TYDR SI W G+ N CP+T + L +L N +
Sbjct: 290 EDLLCPISLEIMTDPVVIETGHTYDRSSITKWF--GSGNITCPITGKILTS-TELVDNVS 346
Query: 131 LRRLIQAWCADNSAY--GIDR--------IPTPKAP------LSKLQIIKLIKDIWKPEL 174
+R++I+ C N GI R +P A ++K +LI E+
Sbjct: 347 VRQVIRKHCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELIN--GGEEM 404
Query: 175 QTKTLIQLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDKNQVGGLEGALSILHFF--- 231
+ + ++ V + NR C+ +AG +L + + + Q + G L++
Sbjct: 405 IYRAVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLSKHVTGK 464
Query: 232 -KITSEYMKL 240
KI E +K+
Sbjct: 465 SKIAGEGLKI 474
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 15/143 (10%)
Query: 75 CPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNHTLRRL 134
CPISL+IM DPV +G TYDR SI W G N CP T + L + L N +++++
Sbjct: 284 CPISLEIMSDPVVLESGHTYDRSSITKWFASG--NITCPKTGKTLVSTV-LVDNFSVKQV 340
Query: 135 IQAWCADNSAY----GIDRIPTPKAPLSKLQIIKLIKDIWKPEL-------QTKTLIQLE 183
IQ++ N G ++ ++ L+ + KL + EL K L+++
Sbjct: 341 IQSYSKQNGVVMGQKGKKKVDVAES-LAAEEAGKLTAEFLAGELIKGDEEEMVKALVEIR 399
Query: 184 VFAAENERNRKCMAEAGVPRAML 206
+ + R C+ EAGV +++
Sbjct: 400 ILTKTSTFYRSCLVEAGVVESLM 422
>sp|A0AUS0|WSDU1_DANRE WD repeat, SAM and U-box domain-containing protein 1 OS=Danio rerio
GN=wdsub1 PE=2 SV=1
Length = 487
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 70 PEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNH 129
P+ F+CPI+ +IMKDPV A G +Y+RE+IE W+ N + P+T PL L LTPN
Sbjct: 418 PDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTS--PMTNLPLQTTL-LTPNR 474
Query: 130 TLRRLIQAW 138
TL+ I W
Sbjct: 475 TLKMAIFRW 483
>sp|Q5FVN8|WSDU1_RAT WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus
norvegicus GN=Wdsub1 PE=2 SV=1
Length = 476
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 69 IPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPN 128
IP+ FICPI+ ++MKDPV A G +Y+RE++E W+ + + P+T LP L LTPN
Sbjct: 404 IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTS--PMTNLALPS-LVLTPN 460
Query: 129 HTLRRLIQAW 138
TL+ I W
Sbjct: 461 RTLKMAINRW 470
>sp|Q9D0I6|WSDU1_MOUSE WD repeat, SAM and U-box domain-containing protein 1 OS=Mus
musculus GN=Wdsub1 PE=2 SV=1
Length = 474
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 69 IPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPN 128
IP+ FICPI+ ++MKDPV A G +Y+RE++E W+ + + P+T LP L LTPN
Sbjct: 402 IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTS--PMTNLALPS-LVLTPN 458
Query: 129 HTLRRLIQAW 138
TL+ I W
Sbjct: 459 RTLKMAINRW 468
>sp|Q9LM76|PUB44_ARATH U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44
PE=1 SV=1
Length = 801
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 38/193 (19%)
Query: 69 IPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNA---ECPVTKQPLPKDLDL 125
I E FICP++ ++M DPVT G T++RE+IE W + ++ CP+T Q L D+
Sbjct: 23 IYEAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQEL-TSTDV 81
Query: 126 TPNHTLRRLIQAWCADNSAYGID---------------------------RIPTPKAPLS 158
+ + LR I+ W + N A +D I + + +
Sbjct: 82 SASIALRNTIEEWRSRNDAAKLDIARQSLFLGNAETDILQALMHVRQICRTIRSNRHGVR 141
Query: 159 KLQIIKLIKDIWKP---ELQTKTLIQLEVFAAENERNRKCMAEAGVPRAMLTYIVNCCDK 215
Q+I +I D+ K ++ K L L+V ++ ++ +AE R ++ ++ + K
Sbjct: 142 NSQLIHMIIDMLKSTSHRVRYKALQTLQVVVEGDDESKAIVAEGDTVRTLVKFLSHEPSK 201
Query: 216 NQVGGLEGALSIL 228
G E A+S+L
Sbjct: 202 ----GREAAVSLL 210
>sp|Q9LU47|PUB53_ARATH Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana
GN=PUB53 PE=3 SV=1
Length = 819
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 70 PEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPNH 129
P +F CP+ +MK+P A G TYDR +IE W+ N+ PVT PL ++++L PNH
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWM---ENHRTSPVTNSPL-QNVNLLPNH 805
Query: 130 TLRRLIQAW 138
TL I W
Sbjct: 806 TLYAAIVEW 814
>sp|Q9CAA7|PUB42_ARATH Putative U-box domain-containing protein 42 OS=Arabidopsis thaliana
GN=PUB42 PE=2 SV=1
Length = 1033
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 10/107 (9%)
Query: 55 LSLLFQMDDHQDIEIP-EYFICPISLQIMKDPVTAITGITYDRESIEHWL--FQGNNNAE 111
LS+L Q+ Q +E P + FICP++ +IM+DPVT TG+T +R+++ W F ++
Sbjct: 233 LSMLPQVT--QFMEPPYQAFICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEIN 290
Query: 112 CPVTKQPLPKDLDLTPNHTLRRLIQAWCADNSAYGIDRIPTPKAPLS 158
CPVT Q L +L+ N L+ +IQ W N A RI A LS
Sbjct: 291 CPVTGQKLTT--ELSANVVLKTIIQEWKVRNEAA---RIKVAHAALS 332
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 69 IPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTPN 128
+PE F C +S +M DPV +G T++R I+ W +GN++ CP++K+ L D L PN
Sbjct: 219 LPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDS--CPISKRKL-DDFTLKPN 275
Query: 129 HTLRRLIQAWCADNSAYGID 148
L+ I WCA N G+D
Sbjct: 276 VELKSQISEWCAKN---GLD 292
>sp|Q8GZ84|PUB36_ARATH U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36
PE=2 SV=2
Length = 435
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 68 EIPEYFICPISLQIMKDPVTAITGITYDRESIEHWLFQGNNNAECPVTKQPLPKDLDLTP 127
E P+YFICPI+ IM+DP A G TY+ E+I W +G+ + P+ + LP L P
Sbjct: 352 EPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETS--PMINKRLP-HTSLVP 408
Query: 128 NHTLRRLIQAW 138
N LR IQ W
Sbjct: 409 NLALRSAIQEW 419
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,878,477
Number of Sequences: 539616
Number of extensions: 5403274
Number of successful extensions: 16619
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 16418
Number of HSP's gapped (non-prelim): 146
length of query: 425
length of database: 191,569,459
effective HSP length: 120
effective length of query: 305
effective length of database: 126,815,539
effective search space: 38678739395
effective search space used: 38678739395
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)