Query 041418
Match_columns 349
No_of_seqs 515 out of 3569
Neff 9.4
Searched_HMMs 13730
Date Mon Mar 25 11:19:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041418.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/041418hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1p9ag_ c.10.2.7 (G:) von Will 99.7 1.3E-16 9.4E-21 139.8 13.3 164 152-320 25-206 (266)
2 d2omza2 c.10.2.1 (A:33-416) In 99.7 6.8E-16 4.9E-20 141.4 15.1 74 119-213 43-116 (384)
3 d1xkua_ c.10.2.7 (A:) Decorin 99.6 6.1E-16 4.5E-20 137.9 13.6 190 152-347 46-284 (305)
4 d1ogqa_ c.10.2.8 (A:) Polygala 99.6 3.1E-16 2.2E-20 140.4 8.4 208 120-346 50-302 (313)
5 d1ozna_ c.10.2.7 (A:) Reticulo 99.6 3.7E-15 2.7E-19 131.5 11.7 166 152-320 26-236 (284)
6 d1ogqa_ c.10.2.8 (A:) Polygala 99.6 2.3E-15 1.7E-19 134.6 9.6 188 115-320 71-302 (313)
7 d1xkua_ c.10.2.7 (A:) Decorin 99.6 2E-14 1.4E-18 127.9 15.2 193 120-320 31-283 (305)
8 d1h6ua2 c.10.2.1 (A:36-262) In 99.5 1.4E-14 1E-18 123.4 10.8 151 155-317 58-225 (227)
9 d1p9ag_ c.10.2.7 (G:) von Will 99.5 3.7E-14 2.7E-18 123.8 13.1 181 157-346 7-206 (266)
10 d1h6ta2 c.10.2.1 (A:31-240) In 99.5 4.7E-14 3.4E-18 118.8 12.3 154 119-318 45-209 (210)
11 d2omxa2 c.10.2.1 (A:37-235) In 99.5 3.4E-14 2.5E-18 118.6 11.2 52 155-209 57-108 (199)
12 d2omza2 c.10.2.1 (A:33-416) In 99.5 6.4E-13 4.7E-17 121.2 16.8 176 154-345 191-383 (384)
13 d1ozna_ c.10.2.7 (A:) Reticulo 99.4 5.4E-13 3.9E-17 117.3 11.8 179 163-347 14-237 (284)
14 d2omxa2 c.10.2.1 (A:37-235) In 99.4 1.8E-12 1.3E-16 107.8 12.4 147 158-314 38-199 (199)
15 d2astb2 c.10.1.3 (B:2136-2419) 99.3 5.6E-13 4.1E-17 117.4 7.9 137 156-319 67-235 (284)
16 d1h6ta2 c.10.2.1 (A:31-240) In 99.3 1.6E-12 1.2E-16 109.2 10.1 159 158-343 44-208 (210)
17 d1jl5a_ c.10.2.6 (A:) Leucine 99.3 1.3E-11 9.2E-16 110.8 14.6 190 119-320 57-315 (353)
18 d1h6ua2 c.10.2.1 (A:36-262) In 99.3 2.3E-11 1.7E-15 103.1 13.5 166 118-294 39-226 (227)
19 d1a9na_ c.10.2.4 (A:) Spliceso 99.3 2.6E-12 1.9E-16 103.3 6.0 134 155-320 13-150 (162)
20 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.2 1.3E-11 9.2E-16 105.5 10.4 167 152-320 23-212 (242)
21 d1jl5a_ c.10.2.6 (A:) Leucine 99.2 2.4E-11 1.7E-15 109.0 11.3 57 120-200 38-94 (353)
22 d1dcea3 c.10.2.2 (A:444-567) R 99.2 4.6E-12 3.3E-16 97.1 4.9 44 156-200 16-59 (124)
23 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.2 2.6E-11 1.9E-15 100.1 9.2 113 152-320 23-137 (192)
24 d1a9na_ c.10.2.4 (A:) Spliceso 99.1 1.3E-11 9.5E-16 99.1 4.3 126 116-275 14-145 (162)
25 d1dcea3 c.10.2.2 (A:444-567) R 99.1 7.8E-11 5.7E-15 90.0 7.3 90 163-259 1-104 (124)
26 d1m9la_ c.10.3.1 (A:) Outer ar 99.0 1.1E-12 8.3E-17 109.0 -8.1 59 152-212 40-98 (198)
27 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.9 7.2E-10 5.2E-14 91.1 7.5 127 162-348 10-139 (192)
28 d2astb2 c.10.1.3 (B:2136-2419) 98.9 3.5E-10 2.5E-14 99.1 4.8 147 116-275 42-231 (284)
29 d1xwdc1 c.10.2.7 (C:18-259) Fo 98.8 3.8E-09 2.8E-13 89.7 9.0 181 162-348 10-214 (242)
30 d1m9la_ c.10.3.1 (A:) Outer ar 98.8 2.8E-10 2.1E-14 94.2 1.6 122 161-320 24-151 (198)
31 d2ifga3 c.10.2.7 (A:36-191) Hi 98.7 2.4E-08 1.8E-12 78.9 10.0 105 161-320 9-114 (156)
32 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.7 3.9E-09 2.9E-13 97.3 4.6 36 161-197 85-125 (460)
33 d2ifga3 c.10.2.7 (A:36-191) Hi 98.5 1.8E-07 1.3E-11 73.8 8.2 59 152-210 23-83 (156)
34 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.4 5.1E-08 3.7E-12 87.1 3.7 59 154-213 53-127 (344)
35 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.3 1.3E-07 9.5E-12 84.4 4.5 43 154-197 87-134 (344)
36 d1koha1 c.10.2.3 (A:201-362) m 97.5 2.8E-05 2E-09 61.1 3.6 47 155-201 60-108 (162)
37 d1z7xw1 c.10.1.1 (W:1-460) Rib 97.2 4.6E-05 3.3E-09 69.2 1.9 15 306-320 166-180 (460)
38 d1koha1 c.10.2.3 (A:201-362) m 97.2 1.3E-05 9.6E-10 63.0 -1.9 42 159-201 41-82 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 94.2 0.059 4.3E-06 41.3 7.2 13 244-256 99-111 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 94.2 0.014 1E-06 45.1 3.3 110 181-322 12-144 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 93.0 0.065 4.7E-06 40.9 5.4 40 156-196 42-86 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 89.1 0.14 1E-05 38.8 3.7 93 157-256 14-143 (166)
43 d1jhfa1 a.4.5.2 (A:2-72) LexA 21.4 83 0.0061 19.0 5.4 21 57-77 39-59 (71)
No 1
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=1.3e-16 Score=139.77 Aligned_cols=164 Identities=17% Similarity=0.110 Sum_probs=109.9
Q ss_pred CCcccCCCCCCCEEeecCCCCcccchhHHhcCcCCcEEeccCcCccccchhhhccccchhhhhCCCCCCeeeccCCCCCC
Q 041418 152 YPSGIENLFLLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDHTVDEFWKMKKLRHLNFGLSCLKSLKLANESKMP 231 (349)
Q Consensus 152 lp~~i~~l~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~~~l~~L~~L~l~~~~~~~ 231 (349)
+|+.+. +++++|+|++|.++.+|...|.++++|++|++++|.++.+|. ++.+++|++|+-.-.+++...- .-..++
T Consensus 25 iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~-~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~ 100 (266)
T d1p9ag_ 25 LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-DGTLPVLGTLDLSHNQLQSLPL-LGQTLP 100 (266)
T ss_dssp CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-CSCCTTCCEEECCSSCCSSCCC-CTTTCT
T ss_pred eCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccccc-cccccccccccccccccccccc-cccccc
Confidence 555443 467788888888887776655778888888888887777764 4555555555400001110000 003456
Q ss_pred CccEEEEccC----------CCCCCccEEEEeecCCCCCCcccccCCccccccc-------cccc-ccccccccceeeee
Q 041418 232 WLSKIVLAEY----------LFPHSLTHLSFSNTDRMDDPMPVLETLPLLQKAD-------FWTM-GNAAMPKLECLIIN 293 (349)
Q Consensus 232 ~L~~L~l~~~----------~~~~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~-------~~~~-~~~~~~~L~~L~l~ 293 (349)
+|+.|+++++ ..+.+++.|++++|.+...+...+..+++|+.++ .+.. ..+.+++|+.|+++
T Consensus 101 ~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls 180 (266)
T d1p9ag_ 101 ALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQ 180 (266)
T ss_dssp TCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECC
T ss_pred ccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccccccccccCccccccccccceeecc
Confidence 6666666655 4566777777777777766666666677777666 1111 12568899999999
Q ss_pred ccCCCCCCCcccCCCCCCCEEEecCCC
Q 041418 294 PCAYLKKMPEHLWCIKSLNKFDCWWPQ 320 (349)
Q Consensus 294 ~c~~l~~lp~~l~~l~~L~~L~l~~~~ 320 (349)
+|. ++.+|.++..+++|+.|+++++|
T Consensus 181 ~N~-L~~lp~~~~~~~~L~~L~L~~Np 206 (266)
T d1p9ag_ 181 ENS-LYTIPKGFFGSHLLPFAFLHGNP 206 (266)
T ss_dssp SSC-CCCCCTTTTTTCCCSEEECCSCC
T ss_pred cCC-CcccChhHCCCCCCCEEEecCCC
Confidence 987 88999999999999999999977
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.65 E-value=6.8e-16 Score=141.43 Aligned_cols=74 Identities=19% Similarity=0.211 Sum_probs=46.1
Q ss_pred CCCeeEEEeecCCCCCCCcchHHhhhccCccccCCcccCCCCCCCEEeecCCCCcccchhHHhcCcCCcEEeccCcCccc
Q 041418 119 DSQLHSFLCCSPESRHIDPIDWEKICGMFKLLRYPSGIENLFLLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDH 198 (349)
Q Consensus 119 ~~~lr~l~~~~~~~~~~~~~~~~~~~~~l~~L~lp~~i~~l~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~ 198 (349)
+.++++|.+.+..... + ++++.+++|++|++++|+++.+|+ + +++++|++|++++|.+..
T Consensus 43 l~~l~~L~l~~~~I~~-----------------l-~gl~~L~nL~~L~Ls~N~l~~l~~-l-~~L~~L~~L~L~~n~i~~ 102 (384)
T d2omza2 43 LDQVTTLQADRLGIKS-----------------I-DGVEYLNNLTQINFSNNQLTDITP-L-KNLTKLVDILMNNNQIAD 102 (384)
T ss_dssp HTTCCEEECCSSCCCC-----------------C-TTGGGCTTCCEEECCSSCCCCCGG-G-TTCTTCCEEECCSSCCCC
T ss_pred hCCCCEEECCCCCCCC-----------------c-cccccCCCCCEEeCcCCcCCCCcc-c-cCCccccccccccccccc
Confidence 4568888887765542 1 235556666666666666666654 3 666666666666666666
Q ss_pred cchhhhccccchhhh
Q 041418 199 TVDEFWKMKKLRHLN 213 (349)
Q Consensus 199 lp~~i~~L~~L~~L~ 213 (349)
+++ ++++++|+.|+
T Consensus 103 i~~-l~~l~~L~~L~ 116 (384)
T d2omza2 103 ITP-LANLTNLTGLT 116 (384)
T ss_dssp CGG-GTTCTTCCEEE
T ss_pred ccc-ccccccccccc
Confidence 653 56666666554
No 3
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.65 E-value=6.1e-16 Score=137.89 Aligned_cols=190 Identities=21% Similarity=0.176 Sum_probs=131.1
Q ss_pred CCc-ccCCCCCCCEEeecCCCCcccchhHHhcCcCCcEEeccCcCccccchhhhccccchhhh--------------hCC
Q 041418 152 YPS-GIENLFLLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDHTVDEFWKMKKLRHLN--------------FGL 216 (349)
Q Consensus 152 lp~-~i~~l~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~--------------~~l 216 (349)
+|+ +|.++++|++|++++|.+..+++..|.++++|++|++++|.++.+|..+. ..++.|. ...
T Consensus 46 l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~l~~~~~--~~l~~L~~~~n~l~~l~~~~~~~~ 123 (305)
T d1xkua_ 46 IKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMP--KTLQELRVHENEITKVRKSVFNGL 123 (305)
T ss_dssp BCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSCC--TTCCEEECCSSCCCBBCHHHHTTC
T ss_pred cChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccCcCccchh--hhhhhhhccccchhhhhhhhhhcc
Confidence 554 68888899999999988888866545888999999999988888876542 2333332 223
Q ss_pred CCCCeeeccCC------------CCCCCccEEEEccC-------CCCCCccEEEEeecCCCCCCcccccCCccccccc--
Q 041418 217 SCLKSLKLANE------------SKMPWLSKIVLAEY-------LFPHSLTHLSFSNTDRMDDPMPVLETLPLLQKAD-- 275 (349)
Q Consensus 217 ~~L~~L~l~~~------------~~~~~L~~L~l~~~-------~~~~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~-- 275 (349)
..+..+..... ..+++|+.+++.++ ..+++|+.|++++|.........+..++.++.|.
T Consensus 124 ~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s 203 (305)
T d1xkua_ 124 NQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLS 203 (305)
T ss_dssp TTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECC
T ss_pred ccccccccccccccccCCCccccccccccCccccccCCccccCcccCCccCEEECCCCcCCCCChhHhhccccccccccc
Confidence 33444443310 45677888888776 4577888999998888777777888888888776
Q ss_pred -----cc-ccccccccccceeeeeccCCCCCCCcccCCCCCCCEEEecCCCHHHHHhhhh-------cccccccccceee
Q 041418 276 -----FW-TMGNAAMPKLECLIINPCAYLKKMPEHLWCIKSLNKFDCWWPQPELRQKLRE-------FEDKEQQIPNRQS 342 (349)
Q Consensus 276 -----~~-~~~~~~~~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~~~~~~~~~l~~-------~~~~i~~ip~i~~ 342 (349)
.. ......+++|++|++++|+ +..+|.++..+++|++|++++|. +..+.. ......++..+.+
T Consensus 204 ~n~l~~~~~~~~~~l~~L~~L~L~~N~-L~~lp~~l~~l~~L~~L~Ls~N~---i~~i~~~~f~~~~~~~~~~~L~~L~L 279 (305)
T d1xkua_ 204 FNSISAVDNGSLANTPHLRELHLNNNK-LVKVPGGLADHKYIQVVYLHNNN---ISAIGSNDFCPPGYNTKKASYSGVSL 279 (305)
T ss_dssp SSCCCEECTTTGGGSTTCCEEECCSSC-CSSCCTTTTTCSSCCEEECCSSC---CCCCCTTSSSCSSCCTTSCCCSEEEC
T ss_pred cccccccccccccccccceeeeccccc-ccccccccccccCCCEEECCCCc---cCccChhhccCcchhcccCCCCEEEC
Confidence 11 1112456889999999985 88898889999999999999887 233322 1223344555666
Q ss_pred ecccc
Q 041418 343 TGEMM 347 (349)
Q Consensus 343 ~~~~~ 347 (349)
++|.+
T Consensus 280 ~~N~~ 284 (305)
T d1xkua_ 280 FSNPV 284 (305)
T ss_dssp CSSSS
T ss_pred CCCcC
Confidence 66654
No 4
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.62 E-value=3.1e-16 Score=140.45 Aligned_cols=208 Identities=15% Similarity=0.145 Sum_probs=139.8
Q ss_pred CCeeEEEeecCCCCCCCcchHHhhhccCccccCCcccCCCCCCCEEeecC-CCCc-ccchhHHhcCcCCcEEeccCcCcc
Q 041418 120 SQLHSFLCCSPESRHIDPIDWEKICGMFKLLRYPSGIENLFLLRYLKLNI-PSLK-SLSSSLLSNLLNLYTLDMPFSYID 197 (349)
Q Consensus 120 ~~lr~l~~~~~~~~~~~~~~~~~~~~~l~~L~lp~~i~~l~~L~~L~l~~-~~l~-~lp~~if~~l~~L~~L~l~~~~l~ 197 (349)
.+++.|.+.++..... ..+|+++++|++|++|++++ |.++ .+|+++ +++++|++|++++|.+.
T Consensus 50 ~~v~~L~L~~~~l~g~--------------~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i-~~L~~L~~L~Ls~N~l~ 114 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKP--------------YPIPSSLANLPYLNFLYIGGINNLVGPIPPAI-AKLTQLHYLYITHTNVS 114 (313)
T ss_dssp CCEEEEEEECCCCSSC--------------EECCGGGGGCTTCSEEEEEEETTEESCCCGGG-GGCTTCSEEEEEEECCE
T ss_pred EEEEEEECCCCCCCCC--------------CCCChHHhcCcccccccccccccccccccccc-ccccccchhhhcccccc
Confidence 4688888887655320 01677888888888888876 6666 788887 88888888888888666
Q ss_pred cc-chhhhccccchhhh--------------hCCCCCCeeeccCC----------CCCCCc-cEEEEccC----------
Q 041418 198 HT-VDEFWKMKKLRHLN--------------FGLSCLKSLKLANE----------SKMPWL-SKIVLAEY---------- 241 (349)
Q Consensus 198 ~l-p~~i~~L~~L~~L~--------------~~l~~L~~L~l~~~----------~~~~~L-~~L~l~~~---------- 241 (349)
.+ |..+..+.+|++++ +.+++|+.++++++ ..+..+ +.+.++++
T Consensus 115 ~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~ 194 (313)
T d1ogqa_ 115 GAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTF 194 (313)
T ss_dssp EECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGG
T ss_pred ccccccccchhhhcccccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccc
Confidence 55 44467777777766 45566666666521 223333 55555554
Q ss_pred CCCCCccEEEEeecCCCCCCcccccCCccccccc-------ccccccccccccceeeeeccCCCCCCCcccCCCCCCCEE
Q 041418 242 LFPHSLTHLSFSNTDRMDDPMPVLETLPLLQKAD-------FWTMGNAAMPKLECLIINPCAYLKKMPEHLWCIKSLNKF 314 (349)
Q Consensus 242 ~~~~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~-------~~~~~~~~~~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L 314 (349)
..+ ....+++..+...+..+..++.+++++.+. ..+...+.+++|+.|++++|+..+.+|.+++++++|++|
T Consensus 195 ~~l-~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L 273 (313)
T d1ogqa_ 195 ANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSL 273 (313)
T ss_dssp GGC-CCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEE
T ss_pred ccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccCccCeecccCChHHhCCCCCCEE
Confidence 112 233566666666666666667777777776 222334567899999999998666999999999999999
Q ss_pred EecCCCHHHHHhhhhcccccccccceeeeccc
Q 041418 315 DCWWPQPELRQKLREFEDKEQQIPNRQSTGEM 346 (349)
Q Consensus 315 ~l~~~~~~~~~~l~~~~~~i~~ip~i~~~~~~ 346 (349)
++++|. +...+ +++.+++++..+.+.+|.
T Consensus 274 ~Ls~N~--l~g~i-P~~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 274 NVSFNN--LCGEI-PQGGNLQRFDVSAYANNK 302 (313)
T ss_dssp ECCSSE--EEEEC-CCSTTGGGSCGGGTCSSS
T ss_pred ECcCCc--ccccC-CCcccCCCCCHHHhCCCc
Confidence 999986 11122 245566777777777664
No 5
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=3.7e-15 Score=131.52 Aligned_cols=166 Identities=18% Similarity=0.141 Sum_probs=118.6
Q ss_pred CCcccCCCCCCCEEeecCCCCcccchhHHhcCcCCcEEeccCcCccccchhh-hccccchhhh---------------hC
Q 041418 152 YPSGIENLFLLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDHTVDEF-WKMKKLRHLN---------------FG 215 (349)
Q Consensus 152 lp~~i~~l~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~lp~~i-~~L~~L~~L~---------------~~ 215 (349)
+|..+. +.+++|+|++|+|+++|...|.++++|++|++++|.+..++... ..+..++++. ++
T Consensus 26 iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 103 (284)
T d1ozna_ 26 VPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHG 103 (284)
T ss_dssp CCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTT
T ss_pred cCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcc
Confidence 444433 45677888888888777665577888888888777777665443 4444444443 45
Q ss_pred CCCCCeeeccCC----------CCCCCccEEEEccC----------CCCCCccEEEEeecCCCCCCcccccCCccccccc
Q 041418 216 LSCLKSLKLANE----------SKMPWLSKIVLAEY----------LFPHSLTHLSFSNTDRMDDPMPVLETLPLLQKAD 275 (349)
Q Consensus 216 l~~L~~L~l~~~----------~~~~~L~~L~l~~~----------~~~~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~ 275 (349)
+++|+.|++.+. ..+++|+.+++.++ ...++|+.|++++|++...+...+..+++|+.+.
T Consensus 104 l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~ 183 (284)
T d1ozna_ 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (284)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred cccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhh
Confidence 677777777611 45678888888887 4567889999999998877777888888888887
Q ss_pred -------cc-ccccccccccceeeeeccCCCCCCC-cccCCCCCCCEEEecCCC
Q 041418 276 -------FW-TMGNAAMPKLECLIINPCAYLKKMP-EHLWCIKSLNKFDCWWPQ 320 (349)
Q Consensus 276 -------~~-~~~~~~~~~L~~L~l~~c~~l~~lp-~~l~~l~~L~~L~l~~~~ 320 (349)
.. +...+.+++|+.|++++|. +..+| ..++.+++|++|+++++|
T Consensus 184 l~~N~l~~i~~~~f~~l~~L~~L~l~~N~-i~~~~~~~~~~~~~L~~L~l~~N~ 236 (284)
T d1ozna_ 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANN-LSALPTEALAPLRALQYLRLNDNP 236 (284)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSC-CSCCCHHHHTTCTTCCEEECCSSC
T ss_pred hhhccccccChhHhhhhhhcccccccccc-cccccccccccccccCEEEecCCC
Confidence 11 1223567889999999987 56665 468889999999998865
No 6
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.57 E-value=2.3e-15 Score=134.60 Aligned_cols=188 Identities=14% Similarity=0.080 Sum_probs=114.4
Q ss_pred CCCCCCCeeEEEeec-CCCCCCCcchHHhhhccCccccCCcccCCCCCCCEEeecCCCCcccchhHHhcCcCCcEEeccC
Q 041418 115 EDDYDSQLHSFLCCS-PESRHIDPIDWEKICGMFKLLRYPSGIENLFLLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPF 193 (349)
Q Consensus 115 ~~~~~~~lr~l~~~~-~~~~~~~~~~~~~~~~~l~~L~lp~~i~~l~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~ 193 (349)
...++++++.|.+.+ +...+ . +|.+|++|++|++|++++|++..++...|..+.+|+++++++
T Consensus 71 ~l~~L~~L~~L~Ls~~N~l~g----~------------iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~ 134 (313)
T d1ogqa_ 71 SLANLPYLNFLYIGGINNLVG----P------------IPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSY 134 (313)
T ss_dssp GGGGCTTCSEEEEEEETTEES----C------------CCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCS
T ss_pred HHhcCcccccccccccccccc----c------------cccccccccccchhhhccccccccccccccchhhhccccccc
Confidence 356788999999875 33321 0 556666666666666666666654444336666666666666
Q ss_pred c-Cccccchhhhccccchhhh--------------hCCCCC-CeeeccCC---------CCCCCccEEEEccC-------
Q 041418 194 S-YIDHTVDEFWKMKKLRHLN--------------FGLSCL-KSLKLANE---------SKMPWLSKIVLAEY------- 241 (349)
Q Consensus 194 ~-~l~~lp~~i~~L~~L~~L~--------------~~l~~L-~~L~l~~~---------~~~~~L~~L~l~~~------- 241 (349)
| ....+|..++++++|++++ ..+.++ +.+.+.++ ........+++..+
T Consensus 135 N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~ 214 (313)
T d1ogqa_ 135 NALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDAS 214 (313)
T ss_dssp SEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCG
T ss_pred ccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 6 4445566666666666655 222232 33433311 01112223444443
Q ss_pred ---CCCCCccEEEEeecCCCCCCcccccCCccccccc--------ccccccccccccceeeeeccCCCCCCCcccCCCCC
Q 041418 242 ---LFPHSLTHLSFSNTDRMDDPMPVLETLPLLQKAD--------FWTMGNAAMPKLECLIINPCAYLKKMPEHLWCIKS 310 (349)
Q Consensus 242 ---~~~~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~--------~~~~~~~~~~~L~~L~l~~c~~l~~lp~~l~~l~~ 310 (349)
..+++++.+++++|.+...+ +.++.+++|+.|+ .++...+.+++|++|++++|...+.+|. ++++++
T Consensus 215 ~~~~~~~~l~~l~~~~~~l~~~~-~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~ 292 (313)
T d1ogqa_ 215 VLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQR 292 (313)
T ss_dssp GGCCTTSCCSEEECCSSEECCBG-GGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-STTGGG
T ss_pred ccccccccccccccccccccccc-cccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-cccCCC
Confidence 45566677777776665433 4566666666665 2233346788999999999885558886 788899
Q ss_pred CCEEEecCCC
Q 041418 311 LNKFDCWWPQ 320 (349)
Q Consensus 311 L~~L~l~~~~ 320 (349)
|+.+++++|+
T Consensus 293 L~~l~l~~N~ 302 (313)
T d1ogqa_ 293 FDVSAYANNK 302 (313)
T ss_dssp SCGGGTCSSS
T ss_pred CCHHHhCCCc
Confidence 9999998886
No 7
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.57 E-value=2e-14 Score=127.90 Aligned_cols=193 Identities=15% Similarity=0.097 Sum_probs=148.8
Q ss_pred CCeeEEEeecCCCCCCCcchHHhhhccCcccc------------CCcccCCCCCCCEEeecCCCCcccchhHHhcCcCCc
Q 041418 120 SQLHSFLCCSPESRHIDPIDWEKICGMFKLLR------------YPSGIENLFLLRYLKLNIPSLKSLSSSLLSNLLNLY 187 (349)
Q Consensus 120 ~~lr~l~~~~~~~~~~~~~~~~~~~~~l~~L~------------lp~~i~~l~~L~~L~l~~~~l~~lp~~if~~l~~L~ 187 (349)
+.++.|.+.++....++ +..|.++..|+ .|..|.++++|++|++++|+++.+|... ...++
T Consensus 31 ~~l~~L~Ls~N~i~~l~----~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~l~~~~---~~~l~ 103 (305)
T d1xkua_ 31 PDTALLDLQNNKITEIK----DGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKM---PKTLQ 103 (305)
T ss_dssp TTCCEEECCSSCCCCBC----TTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSC---CTTCC
T ss_pred CCCCEEECcCCcCCCcC----hhHhhccccccccccccccccccchhhhhCCCccCEecccCCccCcCccch---hhhhh
Confidence 67999999988775432 22344444444 4678999999999999999999999754 46889
Q ss_pred EEeccCcCccccchhh-hccccchhhh----------------hCCCCCCeeeccCC-------CCCCCccEEEEccC--
Q 041418 188 TLDMPFSYIDHTVDEF-WKMKKLRHLN----------------FGLSCLKSLKLANE-------SKMPWLSKIVLAEY-- 241 (349)
Q Consensus 188 ~L~l~~~~l~~lp~~i-~~L~~L~~L~----------------~~l~~L~~L~l~~~-------~~~~~L~~L~l~~~-- 241 (349)
.|++.+|.+..++... .....++.+. ..+++|+.+.+.+. ..+++|+.|+++++
T Consensus 104 ~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l~~~~~~~L~~L~l~~n~~ 183 (305)
T d1xkua_ 104 ELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKI 183 (305)
T ss_dssp EEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCC
T ss_pred hhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccccCcccCCccCEEECCCCcC
Confidence 9999999888887653 3344444443 45677888887622 45788999999887
Q ss_pred --------CCCCCccEEEEeecCCCCCCcccccCCccccccc-------ccccccccccccceeeeeccCCCCCCCcc--
Q 041418 242 --------LFPHSLTHLSFSNTDRMDDPMPVLETLPLLQKAD-------FWTMGNAAMPKLECLIINPCAYLKKMPEH-- 304 (349)
Q Consensus 242 --------~~~~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~-------~~~~~~~~~~~L~~L~l~~c~~l~~lp~~-- 304 (349)
..++.++.|++++|.+...+...+..+++|++|+ .++.....+++|+.|++++|+ ++.++..
T Consensus 184 ~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~lp~~l~~l~~L~~L~Ls~N~-i~~i~~~~f 262 (305)
T d1xkua_ 184 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNN-ISAIGSNDF 262 (305)
T ss_dssp CEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSSC-CCCCCTTSS
T ss_pred CCCChhHhhccccccccccccccccccccccccccccceeeecccccccccccccccccCCCEEECCCCc-cCccChhhc
Confidence 6678899999999999888778888999999988 333344678999999999986 8888652
Q ss_pred -----cCCCCCCCEEEecCCC
Q 041418 305 -----LWCIKSLNKFDCWWPQ 320 (349)
Q Consensus 305 -----l~~l~~L~~L~l~~~~ 320 (349)
...+++|+.|+++++|
T Consensus 263 ~~~~~~~~~~~L~~L~L~~N~ 283 (305)
T d1xkua_ 263 CPPGYNTKKASYSGVSLFSNP 283 (305)
T ss_dssp SCSSCCTTSCCCSEEECCSSS
T ss_pred cCcchhcccCCCCEEECCCCc
Confidence 3457899999999999
No 8
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.53 E-value=1.4e-14 Score=123.40 Aligned_cols=151 Identities=18% Similarity=0.148 Sum_probs=85.1
Q ss_pred ccCCCCCCCEEeecCCCCcccchhHHhcCcCCcEEeccCcCccccchhhhccccchhhh-h--CCCCCCeeeccCCCCCC
Q 041418 155 GIENLFLLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDHTVDEFWKMKKLRHLN-F--GLSCLKSLKLANESKMP 231 (349)
Q Consensus 155 ~i~~l~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~-~--~l~~L~~L~l~~~~~~~ 231 (349)
+++.+++|++|++++|.++.+++ + .++++|+++++++|.++.++. +.++++|+.+. . ....+.. + ...+
T Consensus 58 ~l~~l~~L~~L~ls~n~i~~~~~-l-~~l~~l~~l~~~~n~~~~i~~-l~~l~~L~~l~l~~~~~~~~~~--~---~~~~ 129 (227)
T d1h6ua2 58 GVQYLNNLIGLELKDNQITDLAP-L-KNLTKITELELSGNPLKNVSA-IAGLQSIKTLDLTSTQITDVTP--L---AGLS 129 (227)
T ss_dssp TGGGCTTCCEEECCSSCCCCCGG-G-TTCCSCCEEECCSCCCSCCGG-GTTCTTCCEEECTTSCCCCCGG--G---TTCT
T ss_pred hHhcCCCCcEeecCCceeecccc-c-ccccccccccccccccccccc-ccccccccccccccccccccch--h---cccc
Confidence 46777888888888888877654 4 788888888888877777653 55555555554 0 0000000 0 3344
Q ss_pred CccEEEEccC--------CCCCCccEEEEeecCCCCCCcccccCCccccccc------ccccccccccccceeeeeccCC
Q 041418 232 WLSKIVLAEY--------LFPHSLTHLSFSNTDRMDDPMPVLETLPLLQKAD------FWTMGNAAMPKLECLIINPCAY 297 (349)
Q Consensus 232 ~L~~L~l~~~--------~~~~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~------~~~~~~~~~~~L~~L~l~~c~~ 297 (349)
.++.+.++++ ...++|+.|++++|.+... ..++++++|+.|+ .-....+.+++|++|++++|+
T Consensus 130 ~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~Ls~n~l~~l~~l~~l~~L~~L~Ls~N~- 206 (227)
T d1h6ua2 130 NLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDL--TPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQ- 206 (227)
T ss_dssp TCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSC-
T ss_pred chhhhhchhhhhchhhhhccccccccccccccccccc--hhhcccccceecccCCCccCCChhhcCCCCCCEEECcCCc-
Confidence 4555554443 4455566666666655432 2344445554444 001112445666666666664
Q ss_pred CCCCCcccCCCCCCCEEEec
Q 041418 298 LKKMPEHLWCIKSLNKFDCW 317 (349)
Q Consensus 298 l~~lp~~l~~l~~L~~L~l~ 317 (349)
++.+|+ ++++++|+.|+++
T Consensus 207 lt~i~~-l~~l~~L~~L~ls 225 (227)
T d1h6ua2 207 ISDVSP-LANTSNLFIVTLT 225 (227)
T ss_dssp CCBCGG-GTTCTTCCEEEEE
T ss_pred CCCCcc-cccCCCCCEEEee
Confidence 666654 6666666666664
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=3.7e-14 Score=123.80 Aligned_cols=181 Identities=18% Similarity=0.118 Sum_probs=140.2
Q ss_pred CCCCCCCEEeecCCCCcccchhHHhcCcCCcEEeccCcCccccch-hhhccccchhhhhCCCCCCeeeccCCCCCCCccE
Q 041418 157 ENLFLLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDHTVD-EFWKMKKLRHLNFGLSCLKSLKLANESKMPWLSK 235 (349)
Q Consensus 157 ~~l~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~lp~-~i~~L~~L~~L~~~l~~L~~L~l~~~~~~~~L~~ 235 (349)
.+...+...+.++++++++|+++ . +++++|+|++|.++.+|. .+.++++|++|+-.-.+|..+... ..+++|+.
T Consensus 7 ~~~~~~~~v~C~~~~L~~iP~~l-p--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~~--~~l~~L~~ 81 (266)
T d1p9ag_ 7 SKVASHLEVNCDKRNLTALPPDL-P--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGT 81 (266)
T ss_dssp ECSTTCCEEECTTSCCSSCCSCC-C--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCE
T ss_pred cccCCCeEEEccCCCCCeeCcCc-C--cCCCEEECcCCcCCCcCHHHhhccccccccccccccccccccc--cccccccc
Confidence 45566777899999999999877 3 689999999999999975 578888888887222345555433 67889999
Q ss_pred EEEccC---------CCCCCccEEEEeecCCCCCCcccccCCccccccc-------cccc-ccccccccceeeeeccCCC
Q 041418 236 IVLAEY---------LFPHSLTHLSFSNTDRMDDPMPVLETLPLLQKAD-------FWTM-GNAAMPKLECLIINPCAYL 298 (349)
Q Consensus 236 L~l~~~---------~~~~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~-------~~~~-~~~~~~~L~~L~l~~c~~l 298 (349)
|++++| ..+++|+.|++++|.+...+...+..+++++.|. .+.. ....+++|+.+++++|. +
T Consensus 82 L~Ls~N~l~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~-l 160 (266)
T d1p9ag_ 82 LDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN-L 160 (266)
T ss_dssp EECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC-C
T ss_pred cccccccccccccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhccccccc-c
Confidence 999888 6688999999999999888878888888888887 1111 11357889999999987 7
Q ss_pred CCCCc-ccCCCCCCCEEEecCCCHHHHHhhhhcccccccccceeeeccc
Q 041418 299 KKMPE-HLWCIKSLNKFDCWWPQPELRQKLREFEDKEQQIPNRQSTGEM 346 (349)
Q Consensus 299 ~~lp~-~l~~l~~L~~L~l~~~~~~~~~~l~~~~~~i~~ip~i~~~~~~ 346 (349)
..+|. .++.+++|++|++++|. +..+..++.....+..+.+.||-
T Consensus 161 ~~~~~~~~~~l~~L~~L~Ls~N~---L~~lp~~~~~~~~L~~L~L~~Np 206 (266)
T d1p9ag_ 161 TELPAGLLNGLENLDTLLLQENS---LYTIPKGFFGSHLLPFAFLHGNP 206 (266)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSC---CCCCCTTTTTTCCCSEEECCSCC
T ss_pred cccCccccccccccceeecccCC---CcccChhHCCCCCCCEEEecCCC
Confidence 77765 47889999999999997 33555555566677777777764
No 10
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.51 E-value=4.7e-14 Score=118.76 Aligned_cols=154 Identities=22% Similarity=0.260 Sum_probs=104.4
Q ss_pred CCCeeEEEeecCCCCCCCcchHHhhhccCccccCCcccCCCCCCCEEeecCCCCcccchhHHhcCcCCcEEeccCcCccc
Q 041418 119 DSQLHSFLCCSPESRHIDPIDWEKICGMFKLLRYPSGIENLFLLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDH 198 (349)
Q Consensus 119 ~~~lr~l~~~~~~~~~~~~~~~~~~~~~l~~L~lp~~i~~l~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~ 198 (349)
+.+++.+.+.++.... + .+++.+++|++|++++|.++.++. + +++++|++|++++|.++.
T Consensus 45 L~~L~~L~l~~~~i~~-----------------l-~~l~~l~~L~~L~L~~n~i~~l~~-~-~~l~~L~~L~l~~n~i~~ 104 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKS-----------------V-QGIQYLPNVTKLFLNGNKLTDIKP-L-ANLKNLGWLFLDENKVKD 104 (210)
T ss_dssp HHTCCEEECTTSCCCC-----------------C-TTGGGCTTCCEEECCSSCCCCCGG-G-TTCTTCCEEECCSSCCCC
T ss_pred hcCccEEECcCCCCCC-----------------c-hhHhhCCCCCEEeCCCccccCccc-c-ccCccccccccccccccc
Confidence 3456777666655431 2 246778899999999999998874 5 889999999999998888
Q ss_pred cchhhhccccchhhh---hCCCCCCeeeccCCCCCCCccEEEEccC--------CCCCCccEEEEeecCCCCCCcccccC
Q 041418 199 TVDEFWKMKKLRHLN---FGLSCLKSLKLANESKMPWLSKIVLAEY--------LFPHSLTHLSFSNTDRMDDPMPVLET 267 (349)
Q Consensus 199 lp~~i~~L~~L~~L~---~~l~~L~~L~l~~~~~~~~L~~L~l~~~--------~~~~~L~~L~L~~~~l~~~~~~~l~~ 267 (349)
+|. +..+++|+.|+ .....+..+ ..+++++.++++++ ..+++|+.+++++|.+++.+
T Consensus 105 l~~-l~~l~~L~~L~l~~~~~~~~~~l-----~~l~~l~~l~~~~n~l~~~~~~~~l~~L~~l~l~~n~l~~i~------ 172 (210)
T d1h6ta2 105 LSS-LKDLKKLKSLSLEHNGISDINGL-----VHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIV------ 172 (210)
T ss_dssp GGG-GTTCTTCCEEECTTSCCCCCGGG-----GGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCG------
T ss_pred ccc-ccccccccccccccccccccccc-----cccccccccccccccccccccccccccccccccccccccccc------
Confidence 874 76666666664 111222211 34455555555544 34556666666666554321
Q ss_pred CcccccccccccccccccccceeeeeccCCCCCCCcccCCCCCCCEEEecC
Q 041418 268 LPLLQKADFWTMGNAAMPKLECLIINPCAYLKKMPEHLWCIKSLNKFDCWW 318 (349)
Q Consensus 268 l~~L~~L~~~~~~~~~~~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~ 318 (349)
+.+.+++|+.|++++|. ++.+|. +..+++|++|++++
T Consensus 173 ------------~l~~l~~L~~L~Ls~N~-i~~l~~-l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 173 ------------PLAGLTKLQNLYLSKNH-ISDLRA-LAGLKNLDVLELFS 209 (210)
T ss_dssp ------------GGTTCTTCCEEECCSSC-CCBCGG-GTTCTTCSEEEEEE
T ss_pred ------------cccCCCCCCEEECCCCC-CCCChh-hcCCCCCCEEEccC
Confidence 12467889999999886 888874 88899999999864
No 11
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.51 E-value=3.4e-14 Score=118.58 Aligned_cols=52 Identities=23% Similarity=0.300 Sum_probs=34.8
Q ss_pred ccCCCCCCCEEeecCCCCcccchhHHhcCcCCcEEeccCcCccccchhhhccccc
Q 041418 155 GIENLFLLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDHTVDEFWKMKKL 209 (349)
Q Consensus 155 ~i~~l~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~lp~~i~~L~~L 209 (349)
+++.+++|++|++++|.++.+++ + +++++|++|++++|.+..+|. ++++++|
T Consensus 57 ~l~~l~nL~~L~Ls~N~l~~~~~-l-~~l~~L~~L~l~~n~~~~~~~-l~~l~~L 108 (199)
T d2omxa2 57 GVEYLNNLTQINFSNNQLTDITP-L-KNLTKLVDILMNNNQIADITP-LANLTNL 108 (199)
T ss_dssp TGGGCTTCCEEECCSSCCCCCGG-G-TTCTTCCEEECCSSCCCCCGG-GTTCTTC
T ss_pred ccccCCCcCcCccccccccCccc-c-cCCcccccccccccccccccc-ccccccc
Confidence 45667777777777777777664 4 777777777777776666653 4444433
No 12
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.46 E-value=6.4e-13 Score=121.19 Aligned_cols=176 Identities=18% Similarity=0.127 Sum_probs=106.8
Q ss_pred cccCCCCCCCEEeecCCCCcccchhHHhcCcCCcEEeccCcCccccchhhhccccchhhh---hCCCCCCeeeccCCCCC
Q 041418 154 SGIENLFLLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDHTVDEFWKMKKLRHLN---FGLSCLKSLKLANESKM 230 (349)
Q Consensus 154 ~~i~~l~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~---~~l~~L~~L~l~~~~~~ 230 (349)
.....+++++++++++|.++.+++ . +..++|++|++++|.++.+| .+..+++|+.|+ ..+..+.. + ..+
T Consensus 191 ~~~~~l~~~~~l~l~~n~i~~~~~-~-~~~~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~~n~l~~~~~--~---~~~ 262 (384)
T d2omza2 191 SVLAKLTNLESLIATNNQISDITP-L-GILTNLDELSLNGNQLKDIG-TLASLTNLTDLDLANNQISNLAP--L---SGL 262 (384)
T ss_dssp GGGGGCTTCSEEECCSSCCCCCGG-G-GGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCCCGG--G---TTC
T ss_pred cccccccccceeeccCCccCCCCc-c-cccCCCCEEECCCCCCCCcc-hhhcccccchhccccCccCCCCc--c---ccc
Confidence 345566777777777777776654 2 56777888888888777765 366666666665 11111111 1 455
Q ss_pred CCccEEEEccC--------CCCCCccEEEEeecCCCCCCcccccCCccccccc------ccccccccccccceeeeeccC
Q 041418 231 PWLSKIVLAEY--------LFPHSLTHLSFSNTDRMDDPMPVLETLPLLQKAD------FWTMGNAAMPKLECLIINPCA 296 (349)
Q Consensus 231 ~~L~~L~l~~~--------~~~~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~------~~~~~~~~~~~L~~L~l~~c~ 296 (349)
++|+.|+++++ ..++.++.+.+..|.+.+. ..+..+++++.|+ ........+++|++|++++|.
T Consensus 263 ~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~~l~~l~~L~~L~L~~n~ 340 (384)
T d2omza2 263 TKLTELKLGANQISNISPLAGLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNK 340 (384)
T ss_dssp TTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSC
T ss_pred ccCCEeeccCcccCCCCccccccccccccccccccccc--cccchhcccCeEECCCCCCCCCcccccCCCCCEEECCCCC
Confidence 66666666655 4456666677666666542 3455556666555 111223567788888888875
Q ss_pred CCCCCCcccCCCCCCCEEEecCCCHHHHHhhhhcccccccccceeeecc
Q 041418 297 YLKKMPEHLWCIKSLNKFDCWWPQPELRQKLREFEDKEQQIPNRQSTGE 345 (349)
Q Consensus 297 ~l~~lp~~l~~l~~L~~L~l~~~~~~~~~~l~~~~~~i~~ip~i~~~~~ 345 (349)
++.+| .++.+++|++|++++|. +..+. .+..+.++..+.+.+|
T Consensus 341 -l~~l~-~l~~l~~L~~L~l~~N~---l~~l~-~l~~l~~L~~L~L~~N 383 (384)
T d2omza2 341 -VSDVS-SLANLTNINWLSAGHNQ---ISDLT-PLANLTRITQLGLNDQ 383 (384)
T ss_dssp -CCCCG-GGGGCTTCCEEECCSSC---CCBCG-GGTTCTTCSEEECCCE
T ss_pred -CCCCh-hHcCCCCCCEEECCCCc---CCCCh-hhccCCCCCEeeCCCC
Confidence 77776 47778888888888776 22222 2344455555565554
No 13
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=5.4e-13 Score=117.30 Aligned_cols=179 Identities=13% Similarity=0.060 Sum_probs=137.6
Q ss_pred CEEeecCCCCcccchhHHhcCcCCcEEeccCcCccccch-hhhccccchhhh--------------hCCCCCCeeeccC-
Q 041418 163 RYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDHTVD-EFWKMKKLRHLN--------------FGLSCLKSLKLAN- 226 (349)
Q Consensus 163 ~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~lp~-~i~~L~~L~~L~--------------~~l~~L~~L~l~~- 226 (349)
..++.++++++++|..+ .+++++|+|++|.++.+|. .+.++++|++|+ ..+..+..+....
T Consensus 14 ~~v~c~~~~L~~iP~~i---p~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~ 90 (284)
T d1ozna_ 14 VTTSCPQQGLQAVPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (284)
T ss_dssp CEEECCSSCCSSCCTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCCCCCCccCCCC---CCCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccc
Confidence 34567788899999877 3678999999999999986 488999999998 4456666665431
Q ss_pred -C---------CCCCCccEEEEccC----------CCCCCccEEEEeecCCCCCCcccccCCccccccc-------ccc-
Q 041418 227 -E---------SKMPWLSKIVLAEY----------LFPHSLTHLSFSNTDRMDDPMPVLETLPLLQKAD-------FWT- 278 (349)
Q Consensus 227 -~---------~~~~~L~~L~l~~~----------~~~~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~-------~~~- 278 (349)
. ..+++|+.|+++++ ....+|+.+++++|.++..+...+..+++|+.|+ .+.
T Consensus 91 ~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~ 170 (284)
T d1ozna_ 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (284)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred cccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccch
Confidence 0 66789999999988 5678899999999999988878888899999887 111
Q ss_pred cccccccccceeeeeccCCCCCCCcccCCCCCCCEEEecCCCHHHHHhhhh-cccccccccceeeecccc
Q 041418 279 MGNAAMPKLECLIINPCAYLKKMPEHLWCIKSLNKFDCWWPQPELRQKLRE-FEDKEQQIPNRQSTGEMM 347 (349)
Q Consensus 279 ~~~~~~~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~~~~~~~~~l~~-~~~~i~~ip~i~~~~~~~ 347 (349)
.....+++|+.+++++|......|..+..+++|++|+++++. +..+.+ .+.....+..+.+.+|-+
T Consensus 171 ~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~---i~~~~~~~~~~~~~L~~L~l~~N~l 237 (284)
T d1ozna_ 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN---LSALPTEALAPLRALQYLRLNDNPW 237 (284)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC---CSCCCHHHHTTCTTCCEEECCSSCE
T ss_pred hhhccccccchhhhhhccccccChhHhhhhhhcccccccccc---cccccccccccccccCEEEecCCCC
Confidence 112457889999999988555557789999999999999987 223333 445566677777777754
No 14
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.38 E-value=1.8e-12 Score=107.85 Aligned_cols=147 Identities=18% Similarity=0.190 Sum_probs=92.1
Q ss_pred CCCCCCEEeecCCCCcccchhHHhcCcCCcEEeccCcCccccchhhhccccchhhhhCCCCCCeee-ccCCCCCCCccEE
Q 041418 158 NLFLLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDHTVDEFWKMKKLRHLNFGLSCLKSLK-LANESKMPWLSKI 236 (349)
Q Consensus 158 ~l~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~~~l~~L~~L~-l~~~~~~~~L~~L 236 (349)
.+.++++|+++++.++.++ ++ +.+++|++|++++|.++.+++ ++++++|++|+-.-..+..+. + ..+++|+.|
T Consensus 38 ~l~~l~~L~l~~~~i~~l~-~l-~~l~nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l~~n~~~~~~~l---~~l~~L~~L 111 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKSID-GV-EYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITPL---ANLTNLTGL 111 (199)
T ss_dssp HHTTCCEEECTTSCCCCCT-TG-GGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGGG---TTCTTCSEE
T ss_pred HhcCCCEEECCCCCCCCcc-cc-ccCCCcCcCccccccccCccc-ccCCccccccccccccccccccc---ccccccccc
Confidence 3556777777777777664 45 677777777777777776664 666666666651111111111 1 455566666
Q ss_pred EEccC--------CCCCCccEEEEeecCCCCCCcccccCCccccccc------ccccccccccccceeeeeccCCCCCCC
Q 041418 237 VLAEY--------LFPHSLTHLSFSNTDRMDDPMPVLETLPLLQKAD------FWTMGNAAMPKLECLIINPCAYLKKMP 302 (349)
Q Consensus 237 ~l~~~--------~~~~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~------~~~~~~~~~~~L~~L~l~~c~~l~~lp 302 (349)
+++++ ..+++|+.|++++|.+.. .+.+..+++|+.|. ......+.+++|+.|++++|+.-. +|
T Consensus 112 ~l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~--~~~l~~~~~L~~L~l~~n~l~~l~~l~~l~~L~~L~ls~N~i~~-i~ 188 (199)
T d2omxa2 112 TLFNNQITDIDPLKNLTNLNRLELSSNTISD--ISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKVSD-IS 188 (199)
T ss_dssp ECCSSCCCCCGGGTTCTTCSEEECCSSCCCC--CGGGTTCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC-CG
T ss_pred cccccccccccccchhhhhHHhhhhhhhhcc--cccccccccccccccccccccCCccccCCCCCCEEECCCCCCCC-Cc
Confidence 66555 456667777777766543 23466666666665 112234778899999999988777 44
Q ss_pred cccCCCCCCCEE
Q 041418 303 EHLWCIKSLNKF 314 (349)
Q Consensus 303 ~~l~~l~~L~~L 314 (349)
.++.+++|+.|
T Consensus 189 -~l~~L~~L~~L 199 (199)
T d2omxa2 189 -VLAKLTNLESL 199 (199)
T ss_dssp -GGGGCTTCSEE
T ss_pred -cccCCCCCCcC
Confidence 37788888876
No 15
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35 E-value=5.6e-13 Score=117.36 Aligned_cols=137 Identities=18% Similarity=0.151 Sum_probs=75.3
Q ss_pred cCCCCCCCEEeecCCCCc-ccchhHHhcCcCCcEEeccCc-Cccc--cchhhhccccchhhhhCCCCCCeeeccC--C--
Q 041418 156 IENLFLLRYLKLNIPSLK-SLSSSLLSNLLNLYTLDMPFS-YIDH--TVDEFWKMKKLRHLNFGLSCLKSLKLAN--E-- 227 (349)
Q Consensus 156 i~~l~~L~~L~l~~~~l~-~lp~~if~~l~~L~~L~l~~~-~l~~--lp~~i~~L~~L~~L~~~l~~L~~L~l~~--~-- 227 (349)
+..+++|++|+++++.++ ..+..+ +++++|++|++++| .++. +..-. ..+++|++|++++ .
T Consensus 67 ~~~c~~L~~L~L~~~~l~~~~~~~l-~~~~~L~~L~Ls~c~~itd~~l~~l~----------~~~~~L~~L~ls~c~~~~ 135 (284)
T d2astb2 67 LSQCSKLQNLSLEGLRLSDPIVNTL-AKNSNLVRLNLSGCSGFSEFALQTLL----------SSCSRLDELNLSWCFDFT 135 (284)
T ss_dssp HTTBCCCSEEECTTCBCCHHHHHHH-TTCTTCSEEECTTCBSCCHHHHHHHH----------HHCTTCCEEECCCCTTCC
T ss_pred HHhCCCcccccccccCCCcHHHHHH-hcCCCCcCccccccccccccccchhh----------HHHHhccccccccccccc
Confidence 344555566666655544 233344 55556666666555 4432 11111 2334444444431 0
Q ss_pred ---------CCCCCccEEEEccC-------------CCCCCccEEEEeecC-CCCCCcccccCCcccccccccccccccc
Q 041418 228 ---------SKMPWLSKIVLAEY-------------LFPHSLTHLSFSNTD-RMDDPMPVLETLPLLQKADFWTMGNAAM 284 (349)
Q Consensus 228 ---------~~~~~L~~L~l~~~-------------~~~~~L~~L~L~~~~-l~~~~~~~l~~l~~L~~L~~~~~~~~~~ 284 (349)
..+++|+.|+++|+ ..+++|++|++++|. +++..+.. ...+
T Consensus 136 ~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~----------------l~~~ 199 (284)
T d2astb2 136 EKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQE----------------FFQL 199 (284)
T ss_dssp HHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGG----------------GGGC
T ss_pred cccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhh----------------hccc
Confidence 22455666666554 335566666666553 22222222 2457
Q ss_pred cccceeeeeccCCCCC-CCcccCCCCCCCEEEecCC
Q 041418 285 PKLECLIINPCAYLKK-MPEHLWCIKSLNKFDCWWP 319 (349)
Q Consensus 285 ~~L~~L~l~~c~~l~~-lp~~l~~l~~L~~L~l~~~ 319 (349)
++|++|++++|..+.. -...++++|+|+.|++.+|
T Consensus 200 ~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 200 NYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp TTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 8899999999876643 2234778899999999988
No 16
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.34 E-value=1.6e-12 Score=109.15 Aligned_cols=159 Identities=17% Similarity=0.102 Sum_probs=101.7
Q ss_pred CCCCCCEEeecCCCCcccchhHHhcCcCCcEEeccCcCccccchhhhccccchhhhhCCCCCCeeeccCCCCCCCccEEE
Q 041418 158 NLFLLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDHTVDEFWKMKKLRHLNFGLSCLKSLKLANESKMPWLSKIV 237 (349)
Q Consensus 158 ~l~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~~~l~~L~~L~l~~~~~~~~L~~L~ 237 (349)
.+..|++|++++|.++.++ ++ ..+++|++|++++|.++.+|+ ++.+++|++|+-.-.+++.+. .
T Consensus 44 ~L~~L~~L~l~~~~i~~l~-~l-~~l~~L~~L~L~~n~i~~l~~-~~~l~~L~~L~l~~n~i~~l~-----------~-- 107 (210)
T d1h6ta2 44 ELNSIDQIIANNSDIKSVQ-GI-QYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKDLS-----------S-- 107 (210)
T ss_dssp HHHTCCEEECTTSCCCCCT-TG-GGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCGG-----------G--
T ss_pred HhcCccEEECcCCCCCCch-hH-hhCCCCCEEeCCCccccCccc-cccCccccccccccccccccc-----------c--
Confidence 4678999999999999886 46 899999999999999998875 666666655541111122111 0
Q ss_pred EccCCCCCCccEEEEeecCCCCCCcccccCCccccccc------ccccccccccccceeeeeccCCCCCCCcccCCCCCC
Q 041418 238 LAEYLFPHSLTHLSFSNTDRMDDPMPVLETLPLLQKAD------FWTMGNAAMPKLECLIINPCAYLKKMPEHLWCIKSL 311 (349)
Q Consensus 238 l~~~~~~~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~------~~~~~~~~~~~L~~L~l~~c~~l~~lp~~l~~l~~L 311 (349)
...+++|+.|++++|.+.. ++.+..+++++.+. .-......+++|+.+++++|. +..+++ +..+++|
T Consensus 108 ---l~~l~~L~~L~l~~~~~~~--~~~l~~l~~l~~l~~~~n~l~~~~~~~~l~~L~~l~l~~n~-l~~i~~-l~~l~~L 180 (210)
T d1h6ta2 108 ---LKDLKKLKSLSLEHNGISD--INGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQ-ISDIVP-LAGLTKL 180 (210)
T ss_dssp ---GTTCTTCCEEECTTSCCCC--CGGGGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSC-CCCCGG-GTTCTTC
T ss_pred ---ccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccc-cccccc-ccCCCCC
Confidence 0334455555555554432 22344444444444 001122467899999999987 778875 8999999
Q ss_pred CEEEecCCCHHHHHhhhhcccccccccceeee
Q 041418 312 NKFDCWWPQPELRQKLREFEDKEQQIPNRQST 343 (349)
Q Consensus 312 ~~L~l~~~~~~~~~~l~~~~~~i~~ip~i~~~ 343 (349)
+.|++++|. +.++. ....+.++..++++
T Consensus 181 ~~L~Ls~N~---i~~l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 181 QNLYLSKNH---ISDLR-ALAGLKNLDVLELF 208 (210)
T ss_dssp CEEECCSSC---CCBCG-GGTTCTTCSEEEEE
T ss_pred CEEECCCCC---CCCCh-hhcCCCCCCEEEcc
Confidence 999999997 22332 23344445445444
No 17
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.31 E-value=1.3e-11 Score=110.79 Aligned_cols=190 Identities=19% Similarity=0.205 Sum_probs=107.8
Q ss_pred CCCeeEEEeecCCCCCCCcchHHhhhccCccccC----CcccCCC-CCCCEEeecCCCCcccchhHHhcCcCCcEEeccC
Q 041418 119 DSQLHSFLCCSPESRHIDPIDWEKICGMFKLLRY----PSGIENL-FLLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPF 193 (349)
Q Consensus 119 ~~~lr~l~~~~~~~~~~~~~~~~~~~~~l~~L~l----p~~i~~l-~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~ 193 (349)
.+++++|.+.++....+ +..+.+++.|++ -..+..+ +.|++|++++|.++.+|. . +++++|++|++++
T Consensus 57 ~~~L~~L~Ls~N~l~~l-----p~~~~~L~~L~l~~n~l~~l~~lp~~L~~L~L~~n~l~~lp~-~-~~l~~L~~L~l~~ 129 (353)
T d1jl5a_ 57 PPHLESLVASCNSLTEL-----PELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPE-L-QNSSFLKIIDVDN 129 (353)
T ss_dssp CTTCSEEECCSSCCSSC-----CCCCTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSSCCC-C-TTCTTCCEEECCS
T ss_pred CCCCCEEECCCCCCccc-----ccchhhhhhhhhhhcccchhhhhccccccccccccccccccc-h-hhhccceeecccc
Confidence 36788998887766532 223456666651 1223333 358999999999998885 4 7899999999998
Q ss_pred cCccccchhhhccccchhhh---------hCCCCCCeeeccCC----------------------------CCCCCccEE
Q 041418 194 SYIDHTVDEFWKMKKLRHLN---------FGLSCLKSLKLANE----------------------------SKMPWLSKI 236 (349)
Q Consensus 194 ~~l~~lp~~i~~L~~L~~L~---------~~l~~L~~L~l~~~----------------------------~~~~~L~~L 236 (349)
|.+...|.....+..|.... +.++.++.+.+... ..++.|+.+
T Consensus 130 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~L~~l 209 (353)
T d1jl5a_ 130 NSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTI 209 (353)
T ss_dssp SCCSCCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEE
T ss_pred ccccccccccccccchhhccccccccccccccccceeccccccccccccccccccccccccccccccccccccccccccc
Confidence 87777776555544443322 34455555554310 334566666
Q ss_pred EEccC------CCCCCccEEEEeecCCCCCCcccccC----------Cccccccc-----------ccccccccccccce
Q 041418 237 VLAEY------LFPHSLTHLSFSNTDRMDDPMPVLET----------LPLLQKAD-----------FWTMGNAAMPKLEC 289 (349)
Q Consensus 237 ~l~~~------~~~~~L~~L~L~~~~l~~~~~~~l~~----------l~~L~~L~-----------~~~~~~~~~~~L~~ 289 (349)
.++++ ....++..+.+..+.+...+ ..... +..+..+. .+......+++|++
T Consensus 210 ~l~~n~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~L~~ 288 (353)
T d1jl5a_ 210 YADNNLLKTLPDLPPSLEALNVRDNYLTDLP-ELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEE 288 (353)
T ss_dssp ECCSSCCSSCCSCCTTCCEEECCSSCCSCCC-CCCTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCE
T ss_pred ccccccccccccccccccccccccccccccc-cccccccccccccccccccccccchhcccccccCccccccccCCCCCE
Confidence 66555 33344555555555443221 01110 11111111 11111123567888
Q ss_pred eeeeccCCCCCCCcccCCCCCCCEEEecCCC
Q 041418 290 LIINPCAYLKKMPEHLWCIKSLNKFDCWWPQ 320 (349)
Q Consensus 290 L~l~~c~~l~~lp~~l~~l~~L~~L~l~~~~ 320 (349)
|++++|. +..+|. .+++|+.|++++|.
T Consensus 289 L~Ls~N~-l~~lp~---~~~~L~~L~L~~N~ 315 (353)
T d1jl5a_ 289 LNVSNNK-LIELPA---LPPRLERLIASFNH 315 (353)
T ss_dssp EECCSSC-CSCCCC---CCTTCCEEECCSSC
T ss_pred EECCCCc-cCcccc---ccCCCCEEECCCCc
Confidence 8888775 777775 35677777777664
No 18
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.27 E-value=2.3e-11 Score=103.06 Aligned_cols=166 Identities=17% Similarity=0.155 Sum_probs=105.7
Q ss_pred CCCCeeEEEeecCCCCCCCcchHHhhhccCcccc-------CCcccCCCCCCCEEeecCCCCcccchhHHhcCcCCcEEe
Q 041418 118 YDSQLHSFLCCSPESRHIDPIDWEKICGMFKLLR-------YPSGIENLFLLRYLKLNIPSLKSLSSSLLSNLLNLYTLD 190 (349)
Q Consensus 118 ~~~~lr~l~~~~~~~~~~~~~~~~~~~~~l~~L~-------lp~~i~~l~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~ 190 (349)
++.+++.+.+.++...... .+ ..+.+++.|. -...+.++++|+++++++|.++.++. + +++++|++++
T Consensus 39 ~l~~L~~L~l~~~~i~~l~--~l-~~l~~L~~L~ls~n~i~~~~~l~~l~~l~~l~~~~n~~~~i~~-l-~~l~~L~~l~ 113 (227)
T d1h6ua2 39 DLDGITTLSAFGTGVTTIE--GV-QYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVSA-I-AGLQSIKTLD 113 (227)
T ss_dssp HHHTCCEEECTTSCCCCCT--TG-GGCTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCSCCGG-G-TTCTTCCEEE
T ss_pred HcCCcCEEECCCCCCCcch--hH-hcCCCCcEeecCCceeecccccccccccccccccccccccccc-c-cccccccccc
Confidence 3456777777766554221 11 1234444444 12348889999999999999998864 5 8999999999
Q ss_pred ccCcCccccchhhhccccchhhhhCCCCCCee-eccCCCCCCCccEEEEccC--------CCCCCccEEEEeecCCCCCC
Q 041418 191 MPFSYIDHTVDEFWKMKKLRHLNFGLSCLKSL-KLANESKMPWLSKIVLAEY--------LFPHSLTHLSFSNTDRMDDP 261 (349)
Q Consensus 191 l~~~~l~~lp~~i~~L~~L~~L~~~l~~L~~L-~l~~~~~~~~L~~L~l~~~--------~~~~~L~~L~L~~~~l~~~~ 261 (349)
+++|....++. +...+.++.+......+... .+ ..+++|+.|.+.++ ..+++|+.|++++|.++..
T Consensus 114 l~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~---~~~~~L~~L~l~~n~~~~~~~l~~l~~L~~L~Ls~n~l~~l- 188 (227)
T d1h6ua2 114 LTSTQITDVTP-LAGLSNLQVLYLDLNQITNISPL---AGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDI- 188 (227)
T ss_dssp CTTSCCCCCGG-GTTCTTCCEEECCSSCCCCCGGG---GGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC-
T ss_pred cccccccccch-hccccchhhhhchhhhhchhhhh---ccccccccccccccccccchhhcccccceecccCCCccCCC-
Confidence 99996666543 44445554443111111111 11 45666777777666 5678888888888887653
Q ss_pred cccccCCccccccc------ccccccccccccceeeeec
Q 041418 262 MPVLETLPLLQKAD------FWTMGNAAMPKLECLIINP 294 (349)
Q Consensus 262 ~~~l~~l~~L~~L~------~~~~~~~~~~~L~~L~l~~ 294 (349)
+.++.+++|++|+ +-..+.+.+++|+.|++++
T Consensus 189 -~~l~~l~~L~~L~Ls~N~lt~i~~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 189 -SPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTN 226 (227)
T ss_dssp -GGGGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEEEE
T ss_pred -hhhcCCCCCCEEECcCCcCCCCcccccCCCCCEEEeeC
Confidence 4577788888887 1112335678888888864
No 19
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.25 E-value=2.6e-12 Score=103.25 Aligned_cols=134 Identities=16% Similarity=0.094 Sum_probs=85.2
Q ss_pred ccCCCCCCCEEeecCCCCcccchhHHhcCcCCcEEeccCcCccccchhhhccccchhhhhCCCCCCeeeccCCCCCCCcc
Q 041418 155 GIENLFLLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDHTVDEFWKMKKLRHLNFGLSCLKSLKLANESKMPWLS 234 (349)
Q Consensus 155 ~i~~l~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~~~l~~L~~L~l~~~~~~~~L~ 234 (349)
.+.+...+|.|+|++|+|+.+|... ..+++|++|++++|.++.++. +..++ +|++|+++ + ..+.
T Consensus 13 ~~~n~~~lr~L~L~~n~I~~i~~~~-~~l~~L~~L~Ls~N~i~~l~~-~~~l~----------~L~~L~ls---~-N~i~ 76 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIPVIENLG-ATLDQFDAIDFSDNEIRKLDG-FPLLR----------RLKTLLVN---N-NRIC 76 (162)
T ss_dssp EEECTTSCEEEECTTSCCCSCCCGG-GGTTCCSEEECCSSCCCEECC-CCCCS----------SCCEEECC---S-SCCC
T ss_pred hccCcCcCcEEECCCCCCCccCccc-cccccCCEEECCCCCCCccCC-cccCc----------chhhhhcc---c-cccc
Confidence 3567778999999999999998654 889999999999998888753 43333 33333331 1 1122
Q ss_pred EEEEccCCCCCCccEEEEeecCCCCCCcccccCCcccccccccccccccccccceeeeeccCCCCCCCc----ccCCCCC
Q 041418 235 KIVLAEYLFPHSLTHLSFSNTDRMDDPMPVLETLPLLQKADFWTMGNAAMPKLECLIINPCAYLKKMPE----HLWCIKS 310 (349)
Q Consensus 235 ~L~l~~~~~~~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~~~~~~~~~~~~L~~L~l~~c~~l~~lp~----~l~~l~~ 310 (349)
.+.-.-...+++|+.|++++|.+...+ .+. ....+++|+.|++++|+ +...|. .+..+|+
T Consensus 77 ~l~~~~~~~l~~L~~L~L~~N~i~~~~--~l~-------------~l~~l~~L~~L~l~~N~-i~~~~~~r~~~i~~lp~ 140 (162)
T d1a9na_ 77 RIGEGLDQALPDLTELILTNNSLVELG--DLD-------------PLASLKSLTYLCILRNP-VTNKKHYRLYVIYKVPQ 140 (162)
T ss_dssp EECSCHHHHCTTCCEEECCSCCCCCGG--GGG-------------GGGGCTTCCEEECCSSG-GGGSTTHHHHHHHHCTT
T ss_pred CCCccccccccccccceeccccccccc--ccc-------------ccccccccchhhcCCCc-cccccchHHHHHHHCCC
Confidence 221000034677777788877765321 110 11456788888888877 666664 3567788
Q ss_pred CCEEEecCCC
Q 041418 311 LNKFDCWWPQ 320 (349)
Q Consensus 311 L~~L~l~~~~ 320 (349)
|++|+-....
T Consensus 141 L~~LD~~~i~ 150 (162)
T d1a9na_ 141 VRVLDFQKVK 150 (162)
T ss_dssp CSEETTEECC
T ss_pred cCeeCCCCCC
Confidence 8888765544
No 20
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=1.3e-11 Score=105.54 Aligned_cols=167 Identities=13% Similarity=0.053 Sum_probs=91.1
Q ss_pred CCcccCCCCCCCEEeecCCCCcccchhHHhcCcCCcEEeccCcCccc-cch-hhhccccchhhh-hCCCCCCeeeccCCC
Q 041418 152 YPSGIENLFLLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDH-TVD-EFWKMKKLRHLN-FGLSCLKSLKLANES 228 (349)
Q Consensus 152 lp~~i~~l~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~-lp~-~i~~L~~L~~L~-~~l~~L~~L~l~~~~ 228 (349)
+|+.+. +++++|++++|.++.+|...|.++++|++|++++|.+.. +|. .+..+++++++. ....++.......-.
T Consensus 23 iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~ 100 (242)
T d1xwdc1 23 IPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQ 100 (242)
T ss_dssp CCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEE
T ss_pred cCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccccccccccc
Confidence 555442 478889999988888888766888999999998885544 443 355666666654 112223222210003
Q ss_pred CCCCccEEEEccC--------CCCCCcc---EEEEeecCCCCCCcccccCCc-cccccc-------ccccccccccccce
Q 041418 229 KMPWLSKIVLAEY--------LFPHSLT---HLSFSNTDRMDDPMPVLETLP-LLQKAD-------FWTMGNAAMPKLEC 289 (349)
Q Consensus 229 ~~~~L~~L~l~~~--------~~~~~L~---~L~L~~~~l~~~~~~~l~~l~-~L~~L~-------~~~~~~~~~~~L~~ 289 (349)
.+++|+.++++++ ..+.+++ .+...++.+...+...+..++ .++.|. .+.......++++.
T Consensus 101 ~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~~~~l~~ 180 (242)
T d1xwdc1 101 NLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDE 180 (242)
T ss_dssp CCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTTTTCCEEE
T ss_pred ccccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeeecccccccccccccccchhhhc
Confidence 4556666666555 1222233 333333344333333333332 333333 11111112344555
Q ss_pred eeeeccCCCCCCCcc-cCCCCCCCEEEecCCC
Q 041418 290 LIINPCAYLKKMPEH-LWCIKSLNKFDCWWPQ 320 (349)
Q Consensus 290 L~l~~c~~l~~lp~~-l~~l~~L~~L~l~~~~ 320 (349)
+...++..++++|.+ +..+++|++|+++++.
T Consensus 181 ~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~ 212 (242)
T d1xwdc1 181 LNLSDNNNLEELPNDVFHGASGPVILDISRTR 212 (242)
T ss_dssp EECTTCTTCCCCCTTTTTTSCCCSEEECTTSC
T ss_pred cccccccccccccHHHhcCCCCCCEEECCCCc
Confidence 554445557888764 5778888888888876
No 21
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.22 E-value=2.4e-11 Score=108.97 Aligned_cols=57 Identities=18% Similarity=0.023 Sum_probs=39.4
Q ss_pred CCeeEEEeecCCCCCCCcchHHhhhccCccccCCcccCCCCCCCEEeecCCCCcccchhHHhcCcCCcEEeccCcCcccc
Q 041418 120 SQLHSFLCCSPESRHIDPIDWEKICGMFKLLRYPSGIENLFLLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDHT 199 (349)
Q Consensus 120 ~~lr~l~~~~~~~~~~~~~~~~~~~~~l~~L~lp~~i~~l~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~l 199 (349)
.+++.|.+.+..... +|+. .++|++|++++|+++++|..+ .+|+.|++++|.++.+
T Consensus 38 ~~l~~LdLs~~~L~~-----------------lp~~---~~~L~~L~Ls~N~l~~lp~~~----~~L~~L~l~~n~l~~l 93 (353)
T d1jl5a_ 38 RQAHELELNNLGLSS-----------------LPEL---PPHLESLVASCNSLTELPELP----QSLKSLLVDNNNLKAL 93 (353)
T ss_dssp HTCSEEECTTSCCSC-----------------CCSC---CTTCSEEECCSSCCSSCCCCC----TTCCEEECCSSCCSCC
T ss_pred cCCCEEEeCCCCCCC-----------------CCCC---CCCCCEEECCCCCCcccccch----hhhhhhhhhhcccchh
Confidence 477888776654431 5543 467899999999999998654 4666677777655555
Q ss_pred c
Q 041418 200 V 200 (349)
Q Consensus 200 p 200 (349)
+
T Consensus 94 ~ 94 (353)
T d1jl5a_ 94 S 94 (353)
T ss_dssp C
T ss_pred h
Confidence 4
No 22
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.20 E-value=4.6e-12 Score=97.07 Aligned_cols=44 Identities=25% Similarity=0.342 Sum_probs=22.9
Q ss_pred cCCCCCCCEEeecCCCCcccchhHHhcCcCCcEEeccCcCccccc
Q 041418 156 IENLFLLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDHTV 200 (349)
Q Consensus 156 i~~l~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~lp 200 (349)
++.+++|++|++++|.++++|+.+ +.+++|++|++++|.++.+|
T Consensus 16 l~~l~~L~~L~ls~N~l~~lp~~~-~~l~~L~~L~l~~N~i~~l~ 59 (124)
T d1dcea3 16 LEQLLLVTHLDLSHNRLRALPPAL-AALRCLEVLQASDNALENVD 59 (124)
T ss_dssp GGGGTTCCEEECCSSCCCCCCGGG-GGCTTCCEEECCSSCCCCCG
T ss_pred cccCCCCCEEECCCCccCcchhhh-hhhhcccccccccccccccC
Confidence 444555555555555555555444 55555555555555555444
No 23
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.19 E-value=2.6e-11 Score=100.06 Aligned_cols=113 Identities=14% Similarity=0.117 Sum_probs=77.0
Q ss_pred CCcccCCCCCCCEEeecCCCCcc-cchhHHhcCcCCcEEeccCcCccccchhhhccccchhhhhCCCCCCeeeccCCCCC
Q 041418 152 YPSGIENLFLLRYLKLNIPSLKS-LSSSLLSNLLNLYTLDMPFSYIDHTVDEFWKMKKLRHLNFGLSCLKSLKLANESKM 230 (349)
Q Consensus 152 lp~~i~~l~~L~~L~l~~~~l~~-lp~~if~~l~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~~~l~~L~~L~l~~~~~~ 230 (349)
+|..+. +++++|+|++|.|+. ++...|+++++|+.|++++|.+..+|....
T Consensus 23 iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~-------------------------- 74 (192)
T d1w8aa_ 23 IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAF-------------------------- 74 (192)
T ss_dssp CCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTT--------------------------
T ss_pred cCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeecccccccccccccc--------------------------
Confidence 454442 467777777777753 545555777777777777776666654221
Q ss_pred CCccEEEEccCCCCCCccEEEEeecCCCCCCcccccCCcccccccccccccccccccceeeeeccCCCCCCCcc-cCCCC
Q 041418 231 PWLSKIVLAEYLFPHSLTHLSFSNTDRMDDPMPVLETLPLLQKADFWTMGNAAMPKLECLIINPCAYLKKMPEH-LWCIK 309 (349)
Q Consensus 231 ~~L~~L~l~~~~~~~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~~~~~~~~~~~~L~~L~l~~c~~l~~lp~~-l~~l~ 309 (349)
..+++|+.|++++|++...+...| ..+++|+.|+|++|. +..+|++ +..++
T Consensus 75 -----------~~~~~L~~L~Ls~N~l~~l~~~~F----------------~~l~~L~~L~L~~N~-l~~i~~~~f~~l~ 126 (192)
T d1w8aa_ 75 -----------EGASHIQELQLGENKIKEISNKMF----------------LGLHQLKTLNLYDNQ-ISCVMPGSFEHLN 126 (192)
T ss_dssp -----------TTCTTCCEEECCSCCCCEECSSSS----------------TTCTTCCEEECCSSC-CCEECTTSSTTCT
T ss_pred -----------ccccccceeeeccccccccCHHHH----------------hCCCcccccccCCcc-ccccCHHHhcCCc
Confidence 345667777788888776554444 456778888888876 7777664 67888
Q ss_pred CCCEEEecCCC
Q 041418 310 SLNKFDCWWPQ 320 (349)
Q Consensus 310 ~L~~L~l~~~~ 320 (349)
+|++|++++++
T Consensus 127 ~L~~l~L~~N~ 137 (192)
T d1w8aa_ 127 SLTSLNLASNP 137 (192)
T ss_dssp TCCEEECTTCC
T ss_pred ccccccccccc
Confidence 99999998876
No 24
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.13 E-value=1.3e-11 Score=99.06 Aligned_cols=126 Identities=15% Similarity=0.053 Sum_probs=85.5
Q ss_pred CCCCCCeeEEEeecCCCCCCCcchHHhhhccCccccCCcccCCCCCCCEEeecCCCCcccchhHHhcCcCCcEEeccCcC
Q 041418 116 DDYDSQLHSFLCCSPESRHIDPIDWEKICGMFKLLRYPSGIENLFLLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSY 195 (349)
Q Consensus 116 ~~~~~~lr~l~~~~~~~~~~~~~~~~~~~~~l~~L~lp~~i~~l~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~ 195 (349)
..+..++|.|.+.++.... +|..+..+++|++|++++|.+++++. + +.+++|++|++++|.
T Consensus 14 ~~n~~~lr~L~L~~n~I~~-----------------i~~~~~~l~~L~~L~Ls~N~i~~l~~-~-~~l~~L~~L~ls~N~ 74 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPV-----------------IENLGATLDQFDAIDFSDNEIRKLDG-F-PLLRRLKTLLVNNNR 74 (162)
T ss_dssp EECTTSCEEEECTTSCCCS-----------------CCCGGGGTTCCSEEECCSSCCCEECC-C-CCCSSCCEEECCSSC
T ss_pred ccCcCcCcEEECCCCCCCc-----------------cCccccccccCCEEECCCCCCCccCC-c-ccCcchhhhhccccc
Confidence 3456789999999887753 44445678889999999999998864 5 899999999999999
Q ss_pred ccccchhh-hccccchhhhhCCCCCCeeeccCC--CCCCCccEEEEccCCCCCCccEEEEeecCCCCCCc---ccccCCc
Q 041418 196 IDHTVDEF-WKMKKLRHLNFGLSCLKSLKLANE--SKMPWLSKIVLAEYLFPHSLTHLSFSNTDRMDDPM---PVLETLP 269 (349)
Q Consensus 196 l~~lp~~i-~~L~~L~~L~~~l~~L~~L~l~~~--~~~~~L~~L~l~~~~~~~~L~~L~L~~~~l~~~~~---~~l~~l~ 269 (349)
++.+|+.+ ..+++|++| ++.++ ...+.+..+ ..+++|++|++++|.+...+. ..+..+|
T Consensus 75 i~~l~~~~~~~l~~L~~L----------~L~~N~i~~~~~l~~l-----~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp 139 (162)
T d1a9na_ 75 ICRIGEGLDQALPDLTEL----------ILTNNSLVELGDLDPL-----ASLKSLTYLCILRNPVTNKKHYRLYVIYKVP 139 (162)
T ss_dssp CCEECSCHHHHCTTCCEE----------ECCSCCCCCGGGGGGG-----GGCTTCCEEECCSSGGGGSTTHHHHHHHHCT
T ss_pred ccCCCccccccccccccc----------eecccccccccccccc-----ccccccchhhcCCCccccccchHHHHHHHCC
Confidence 99988754 344444444 43211 011111111 557888999999988765441 2455566
Q ss_pred cccccc
Q 041418 270 LLQKAD 275 (349)
Q Consensus 270 ~L~~L~ 275 (349)
+|++|+
T Consensus 140 ~L~~LD 145 (162)
T d1a9na_ 140 QVRVLD 145 (162)
T ss_dssp TCSEET
T ss_pred CcCeeC
Confidence 666665
No 25
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.10 E-value=7.8e-11 Score=90.01 Aligned_cols=90 Identities=20% Similarity=0.278 Sum_probs=70.1
Q ss_pred CEEeecCCCCcccchhHHhcCcCCcEEeccCcCccccchhhhccccchhhh---hCCCCCCeeeccCCCCCCCccEEEEc
Q 041418 163 RYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDHTVDEFWKMKKLRHLN---FGLSCLKSLKLANESKMPWLSKIVLA 239 (349)
Q Consensus 163 ~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~---~~l~~L~~L~l~~~~~~~~L~~L~l~ 239 (349)
|+|++++|+++.+|. + +++++|++|++++|.++.+|++++.+++|+.|+ ..++.+.. + ..+++|+.|+++
T Consensus 1 R~L~Ls~n~l~~l~~-l-~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~~--~---~~l~~L~~L~l~ 73 (124)
T d1dcea3 1 RVLHLAHKDLTVLCH-L-EQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDG--V---ANLPRLQELLLC 73 (124)
T ss_dssp SEEECTTSCCSSCCC-G-GGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCGG--G---TTCSSCCEEECC
T ss_pred CEEEcCCCCCCCCcc-c-ccCCCCCEEECCCCccCcchhhhhhhhcccccccccccccccCc--c---ccccccCeEECC
Confidence 688999999988874 5 889999999999998899988888888888887 23333332 2 567778888877
Q ss_pred cC-----------CCCCCccEEEEeecCCCC
Q 041418 240 EY-----------LFPHSLTHLSFSNTDRMD 259 (349)
Q Consensus 240 ~~-----------~~~~~L~~L~L~~~~l~~ 259 (349)
+| ..+++|+.|++++|.++.
T Consensus 74 ~N~i~~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 74 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred CCccCCCCCchhhcCCCCCCEEECCCCcCCc
Confidence 77 456789999999988754
No 26
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.98 E-value=1.1e-12 Score=109.02 Aligned_cols=59 Identities=22% Similarity=0.209 Sum_probs=47.0
Q ss_pred CCcccCCCCCCCEEeecCCCCcccchhHHhcCcCCcEEeccCcCccccchhhhccccchhh
Q 041418 152 YPSGIENLFLLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDHTVDEFWKMKKLRHL 212 (349)
Q Consensus 152 lp~~i~~l~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~lp~~i~~L~~L~~L 212 (349)
+|.+++.+++|++|++++|.|+.++ .+ +.+++|++|++++|.++.+|.....+++|++|
T Consensus 40 l~~sl~~L~~L~~L~Ls~n~I~~i~-~l-~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L 98 (198)
T d1m9la_ 40 MDATLSTLKACKHLALSTNNIEKIS-SL-SGMENLRILSLGRNLIKKIENLDAVADTLEEL 98 (198)
T ss_dssp CHHHHHHTTTCCEEECSEEEESCCC-CH-HHHTTCCEEECCEEEECSCSSHHHHHHHCCEE
T ss_pred hhhHHhcccccceeECcccCCCCcc-cc-cCCccccChhhccccccccccccccccccccc
Confidence 4567888999999999999999986 45 89999999999999988888655444444444
No 27
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.93 E-value=7.2e-10 Score=91.14 Aligned_cols=127 Identities=9% Similarity=0.069 Sum_probs=96.7
Q ss_pred CCEEeecCCCCcccchhHHhcCcCCcEEeccCcCccc-cchhhhccccchhhhhCCCCCCeeeccCCCCCCCccEEEEcc
Q 041418 162 LRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDH-TVDEFWKMKKLRHLNFGLSCLKSLKLANESKMPWLSKIVLAE 240 (349)
Q Consensus 162 L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~-lp~~i~~L~~L~~L~~~l~~L~~L~l~~~~~~~~L~~L~l~~ 240 (349)
.+.++.++++++++|..+ . +++++|+|++|.++. ++....
T Consensus 10 ~~~v~Cs~~~L~~iP~~l-p--~~l~~L~Ls~N~i~~~~~~~~f------------------------------------ 50 (192)
T d1w8aa_ 10 GTTVDCTGRGLKEIPRDI-P--LHTTELLLNDNELGRISSDGLF------------------------------------ 50 (192)
T ss_dssp TTEEECTTSCCSSCCSCC-C--TTCSEEECCSCCCCSBCCSCSG------------------------------------
T ss_pred CCEEEEeCCCcCccCCCC-C--CCCCEEEeCCCCCccccccccc------------------------------------
Confidence 467899999999999877 3 789999999998865 433211
Q ss_pred CCCCCCccEEEEeecCCCCCCcccccCCcccccccccccccccccccceeeeeccCCCCCCCc-ccCCCCCCCEEEecCC
Q 041418 241 YLFPHSLTHLSFSNTDRMDDPMPVLETLPLLQKADFWTMGNAAMPKLECLIINPCAYLKKMPE-HLWCIKSLNKFDCWWP 319 (349)
Q Consensus 241 ~~~~~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~~~~~~~~~~~~L~~L~l~~c~~l~~lp~-~l~~l~~L~~L~l~~~ 319 (349)
..+++|+.|++++|.+...+...+ ..+++|+.|++++|+ +..+|+ .+..+++|++|+++++
T Consensus 51 -~~l~~L~~L~L~~N~i~~~~~~~~----------------~~~~~L~~L~Ls~N~-l~~l~~~~F~~l~~L~~L~L~~N 112 (192)
T d1w8aa_ 51 -GRLPHLVKLELKRNQLTGIEPNAF----------------EGASHIQELQLGENK-IKEISNKMFLGLHQLKTLNLYDN 112 (192)
T ss_dssp -GGCTTCCEEECCSSCCCCBCTTTT----------------TTCTTCCEEECCSCC-CCEECSSSSTTCTTCCEEECCSS
T ss_pred -CCCceEeeeecccccccccccccc----------------ccccccceeeecccc-ccccCHHHHhCCCcccccccCCc
Confidence 234567777888888776554444 457889999999987 888876 4788999999999999
Q ss_pred CHHHHHhhhh-cccccccccceeeeccccc
Q 041418 320 QPELRQKLRE-FEDKEQQIPNRQSTGEMMS 348 (349)
Q Consensus 320 ~~~~~~~l~~-~~~~i~~ip~i~~~~~~~~ 348 (349)
. +..+.+ .+..+..+..+.+.+|.+.
T Consensus 113 ~---l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 113 Q---ISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp C---CCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred c---ccccCHHHhcCCcccccccccccccc
Confidence 8 445555 5677788888888888653
No 28
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.91 E-value=3.5e-10 Score=99.07 Aligned_cols=147 Identities=16% Similarity=0.150 Sum_probs=91.5
Q ss_pred CCCCCCeeEEEeecCCCCCCCcchHHhhhccCcccc------------CCcccCCCCCCCEEeecCC-CCcc--cchhHH
Q 041418 116 DDYDSQLHSFLCCSPESRHIDPIDWEKICGMFKLLR------------YPSGIENLFLLRYLKLNIP-SLKS--LSSSLL 180 (349)
Q Consensus 116 ~~~~~~lr~l~~~~~~~~~~~~~~~~~~~~~l~~L~------------lp~~i~~l~~L~~L~l~~~-~l~~--lp~~if 180 (349)
.....+++.+.+.+.... ...+...+..+..|+ .+..++.+++|++|+++++ .++. +.. ++
T Consensus 42 ~~~~~~L~~LdLs~~~i~---~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~-l~ 117 (284)
T d2astb2 42 HFSPFRVQHMDLSNSVIE---VSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQT-LL 117 (284)
T ss_dssp CCCCBCCCEEECTTCEEC---HHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHH-HH
T ss_pred hccCCCCCEEECCCCccC---HHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccch-hh
Confidence 344567888887765432 233444555554444 3456788999999999996 6663 333 33
Q ss_pred hcCcCCcEEeccCc-Cccc--cchhhhccccchhhhhCCCCCCeeeccC---C----------CCCCCccEEEEccC---
Q 041418 181 SNLLNLYTLDMPFS-YIDH--TVDEFWKMKKLRHLNFGLSCLKSLKLAN---E----------SKMPWLSKIVLAEY--- 241 (349)
Q Consensus 181 ~~l~~L~~L~l~~~-~l~~--lp~~i~~L~~L~~L~~~l~~L~~L~l~~---~----------~~~~~L~~L~l~~~--- 241 (349)
..+++|++|++++| .++. ++..+... .++|+.|.+++ . ..+++|++|++++|
T Consensus 118 ~~~~~L~~L~ls~c~~~~~~~~~~~~~~~---------~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~i 188 (284)
T d2astb2 118 SSCSRLDELNLSWCFDFTEKHVQVAVAHV---------SETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVML 188 (284)
T ss_dssp HHCTTCCEEECCCCTTCCHHHHHHHHHHS---------CTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTC
T ss_pred HHHHhccccccccccccccccchhhhccc---------ccccchhhhcccccccccccccccccccccccccccccccCC
Confidence 78999999999998 5543 23333322 23444444431 0 45678888888776
Q ss_pred --------CCCCCccEEEEeecC-CCCCCcccccCCccccccc
Q 041418 242 --------LFPHSLTHLSFSNTD-RMDDPMPVLETLPLLQKAD 275 (349)
Q Consensus 242 --------~~~~~L~~L~L~~~~-l~~~~~~~l~~l~~L~~L~ 275 (349)
..+++|++|++++|. +++..+..++++|+|+.|+
T Consensus 189 td~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~ 231 (284)
T d2astb2 189 KNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQ 231 (284)
T ss_dssp CGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEE
T ss_pred CchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEe
Confidence 567899999999974 5544444454444444443
No 29
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.84 E-value=3.8e-09 Score=89.67 Aligned_cols=181 Identities=13% Similarity=0.050 Sum_probs=111.5
Q ss_pred CCEEeecCCCCcccchhHHhcCcCCcEEeccCcCccccchh-hhccccchhhh-hCCCCCCeeeccCCCCCCCccEEEEc
Q 041418 162 LRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDHTVDE-FWKMKKLRHLN-FGLSCLKSLKLANESKMPWLSKIVLA 239 (349)
Q Consensus 162 L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~lp~~-i~~L~~L~~L~-~~l~~L~~L~l~~~~~~~~L~~L~l~ 239 (349)
.+.++.++++++++|.++ .+++++|++++|.++.+|.. +.++++|++|+ ........+....-..++.++++.+.
T Consensus 10 ~~~i~c~~~~l~~iP~~l---~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~ 86 (242)
T d1xwdc1 10 NRVFLCQESKVTEIPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 86 (242)
T ss_dssp SSEEEEESCSCSSCCSCS---CSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEE
T ss_pred CCEEEEeCCCCCCcCCCC---CCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccc
Confidence 368889999999999877 25899999999999999874 67788888776 11111111110000345666666654
Q ss_pred cC-----------CCCCCccEEEEeecCCCCCCc-ccccCCccccccc----cc-cccccc----ccccceeeeeccCCC
Q 041418 240 EY-----------LFPHSLTHLSFSNTDRMDDPM-PVLETLPLLQKAD----FW-TMGNAA----MPKLECLIINPCAYL 298 (349)
Q Consensus 240 ~~-----------~~~~~L~~L~L~~~~l~~~~~-~~l~~l~~L~~L~----~~-~~~~~~----~~~L~~L~l~~c~~l 298 (349)
.+ ..+++|+.|+++.|.+...+. ..+..+..+..+. .. ...... ...++.|++++|. +
T Consensus 87 ~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~-l 165 (242)
T d1xwdc1 87 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNG-I 165 (242)
T ss_dssp CCTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSC-C
T ss_pred ccccccccccccccccccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeeeccccc-c
Confidence 32 568899999999998865432 2222333333222 00 001112 2367788888766 8
Q ss_pred CCCCcccCCCCCCCEEEecCCCHHHHHhhhh-cccccccccceeeeccccc
Q 041418 299 KKMPEHLWCIKSLNKFDCWWPQPELRQKLRE-FEDKEQQIPNRQSTGEMMS 348 (349)
Q Consensus 299 ~~lp~~l~~l~~L~~L~l~~~~~~~~~~l~~-~~~~i~~ip~i~~~~~~~~ 348 (349)
..++......++++.+...++. .+.++.. .+.+...+..+.+.+|.++
T Consensus 166 ~~i~~~~~~~~~l~~~~~l~~n--~l~~l~~~~f~~l~~L~~L~Ls~N~l~ 214 (242)
T d1xwdc1 166 QEIHNCAFNGTQLDELNLSDNN--NLEELPNDVFHGASGPVILDISRTRIH 214 (242)
T ss_dssp CEECTTTTTTCCEEEEECTTCT--TCCCCCTTTTTTSCCCSEEECTTSCCC
T ss_pred cccccccccchhhhcccccccc--ccccccHHHhcCCCCCCEEECCCCcCC
Confidence 8888877777887777654443 1223333 3555666666776666543
No 30
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.84 E-value=2.8e-10 Score=94.18 Aligned_cols=122 Identities=17% Similarity=0.171 Sum_probs=83.0
Q ss_pred CCCEEeecCC--CCcccchhHHhcCcCCcEEeccCcCccccchhhhccccchhhhhCCCCCCeeeccCC--CCCCCccEE
Q 041418 161 LLRYLKLNIP--SLKSLSSSLLSNLLNLYTLDMPFSYIDHTVDEFWKMKKLRHLNFGLSCLKSLKLANE--SKMPWLSKI 236 (349)
Q Consensus 161 ~L~~L~l~~~--~l~~lp~~if~~l~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~~~l~~L~~L~l~~~--~~~~~L~~L 236 (349)
.++.+++++. .++.+|.++ +.+++|++|++++|.++.++. +..+++|++| +++++ ..++.+.
T Consensus 24 ~~~~~~l~~~~~~i~~l~~sl-~~L~~L~~L~Ls~n~I~~i~~-l~~l~~L~~L----------~Ls~N~i~~i~~~~-- 89 (198)
T d1m9la_ 24 EAEKVELHGMIPPIEKMDATL-STLKACKHLALSTNNIEKISS-LSGMENLRIL----------SLGRNLIKKIENLD-- 89 (198)
T ss_dssp TCSCEECCBCCTTCCCCHHHH-HHTTTCCEEECSEEEESCCCC-HHHHTTCCEE----------ECCEEEECSCSSHH--
T ss_pred ccceeeeecccCchhhhhhHH-hcccccceeECcccCCCCccc-ccCCccccCh----------hhcccccccccccc--
Confidence 3555677664 578898888 999999999999999988863 6655544444 33200 0111110
Q ss_pred EEccCCCCCCccEEEEeecCCCCCCcccccCCcccccccccccccccccccceeeeeccCCCCCCCc--ccCCCCCCCEE
Q 041418 237 VLAEYLFPHSLTHLSFSNTDRMDDPMPVLETLPLLQKADFWTMGNAAMPKLECLIINPCAYLKKMPE--HLWCIKSLNKF 314 (349)
Q Consensus 237 ~l~~~~~~~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~~~~~~~~~~~~L~~L~l~~c~~l~~lp~--~l~~l~~L~~L 314 (349)
..+++|+.|++++|.++.. +.+ ..+++|+.|++++|. +..++. .+..+++|+.|
T Consensus 90 -----~~~~~L~~L~l~~N~i~~l--~~~----------------~~l~~L~~L~L~~N~-i~~~~~~~~l~~l~~L~~L 145 (198)
T d1m9la_ 90 -----AVADTLEELWISYNQIASL--SGI----------------EKLVNLRVLYMSNNK-ITNWGEIDKLAALDKLEDL 145 (198)
T ss_dssp -----HHHHHCCEEECSEEECCCH--HHH----------------HHHHHSSEEEESEEE-CCCHHHHHHHTTTTTCSEE
T ss_pred -----ccccccccccccccccccc--ccc----------------cccccccccccccch-hccccccccccCCCcccee
Confidence 2235678888888876532 111 457889999999886 777763 57889999999
Q ss_pred EecCCC
Q 041418 315 DCWWPQ 320 (349)
Q Consensus 315 ~l~~~~ 320 (349)
++++||
T Consensus 146 ~L~~N~ 151 (198)
T d1m9la_ 146 LLAGNP 151 (198)
T ss_dssp EECSSH
T ss_pred ecCCCc
Confidence 999987
No 31
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.74 E-value=2.4e-08 Score=78.91 Aligned_cols=105 Identities=14% Similarity=-0.071 Sum_probs=62.7
Q ss_pred CCCEEeecCCCCcccchhHHhcCcCCcEEeccCc-CccccchhhhccccchhhhhCCCCCCeeeccCCCCCCCccEEEEc
Q 041418 161 LLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFS-YIDHTVDEFWKMKKLRHLNFGLSCLKSLKLANESKMPWLSKIVLA 239 (349)
Q Consensus 161 ~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~-~l~~lp~~i~~L~~L~~L~~~l~~L~~L~l~~~~~~~~L~~L~l~ 239 (349)
....++.+++.+.+.|..+ ..+++|+.|+++++ .++.+|....
T Consensus 9 ~~~~l~c~~~~~~~~p~~l-~~l~~l~~L~l~~n~~l~~i~~~~f----------------------------------- 52 (156)
T d2ifga3 9 GSSGLRCTRDGALDSLHHL-PGAENLTELYIENQQHLQHLELRDL----------------------------------- 52 (156)
T ss_dssp SSSCEECCSSCCCTTTTTS-CSCSCCSEEECCSCSSCCEECGGGS-----------------------------------
T ss_pred CCCeEEecCCCCccCcccc-cCccccCeeecCCCccccccCchhh-----------------------------------
Confidence 3445666666666666666 66677777777655 4666654210
Q ss_pred cCCCCCCccEEEEeecCCCCCCcccccCCcccccccccccccccccccceeeeeccCCCCCCCcccCCCCCCCEEEecCC
Q 041418 240 EYLFPHSLTHLSFSNTDRMDDPMPVLETLPLLQKADFWTMGNAAMPKLECLIINPCAYLKKMPEHLWCIKSLNKFDCWWP 319 (349)
Q Consensus 240 ~~~~~~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~~~~~~~~~~~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~~ 319 (349)
..+++|+.|++++|+++..+...| ..+++|+.|+|++|. ++.+|.......+|+.|+++++
T Consensus 53 --~~l~~L~~L~Ls~N~l~~i~~~~f----------------~~l~~L~~L~Ls~N~-l~~l~~~~~~~~~l~~L~L~~N 113 (156)
T d2ifga3 53 --RGLGELRNLTIVKSGLRFVAPDAF----------------HFTPRLSRLNLSFNA-LESLSWKTVQGLSLQELVLSGN 113 (156)
T ss_dssp --CSCCCCSEEECCSSCCCEECTTGG----------------GSCSCCCEEECCSSC-CSCCCSTTTCSCCCCEEECCSS
T ss_pred --ccccccCcceeeccccCCcccccc----------------cccccccceeccCCC-CcccChhhhccccccccccCCC
Confidence 223455555566666554433333 345667777777766 6777766555556777777776
Q ss_pred C
Q 041418 320 Q 320 (349)
Q Consensus 320 ~ 320 (349)
|
T Consensus 114 p 114 (156)
T d2ifga3 114 P 114 (156)
T ss_dssp C
T ss_pred c
Confidence 5
No 32
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.69 E-value=3.9e-09 Score=97.33 Aligned_cols=36 Identities=28% Similarity=0.308 Sum_probs=19.1
Q ss_pred CCCEEeecCCCCcc-----cchhHHhcCcCCcEEeccCcCcc
Q 041418 161 LLRYLKLNIPSLKS-----LSSSLLSNLLNLYTLDMPFSYID 197 (349)
Q Consensus 161 ~L~~L~l~~~~l~~-----lp~~if~~l~~L~~L~l~~~~l~ 197 (349)
+|++|++++|.++. ++..+ ..+++|++|++++|.++
T Consensus 85 ~L~~L~L~~n~it~~~~~~l~~~l-~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 85 KIQKLSLQNCCLTGAGCGVLSSTL-RTLPTLQELHLSDNLLG 125 (460)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHT-TSCTTCCEEECCSSBCH
T ss_pred CCCEEECCCCCccccccccccchh-hccccccccccccccch
Confidence 46666666665543 22233 45566666666665443
No 33
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.48 E-value=1.8e-07 Score=73.79 Aligned_cols=59 Identities=19% Similarity=0.088 Sum_probs=42.3
Q ss_pred CCcccCCCCCCCEEeecCC-CCcccchhHHhcCcCCcEEeccCcCccccchh-hhccccch
Q 041418 152 YPSGIENLFLLRYLKLNIP-SLKSLSSSLLSNLLNLYTLDMPFSYIDHTVDE-FWKMKKLR 210 (349)
Q Consensus 152 lp~~i~~l~~L~~L~l~~~-~l~~lp~~if~~l~~L~~L~l~~~~l~~lp~~-i~~L~~L~ 210 (349)
.|..+..+++|+.|+++++ .++.++...|.++++|+.|++++|.++.+++. +..+++|+
T Consensus 23 ~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~ 83 (156)
T d2ifga3 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLS 83 (156)
T ss_dssp TTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCC
T ss_pred CcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCccccccccccccc
Confidence 5666777788888888765 58888776668888888888888888888543 44444333
No 34
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.41 E-value=5.1e-08 Score=87.11 Aligned_cols=59 Identities=17% Similarity=0.076 Sum_probs=36.4
Q ss_pred cccCCCCCCCEEeecCCCCccc----c-------hhHHhcCcCCcEEeccCcCccc-----cchhhhccccchhhh
Q 041418 154 SGIENLFLLRYLKLNIPSLKSL----S-------SSLLSNLLNLYTLDMPFSYIDH-----TVDEFWKMKKLRHLN 213 (349)
Q Consensus 154 ~~i~~l~~L~~L~l~~~~l~~l----p-------~~if~~l~~L~~L~l~~~~l~~-----lp~~i~~L~~L~~L~ 213 (349)
..+...++|+.++++++..... | ..+ ...++|+.|++++|.++. +...+...++|++|+
T Consensus 53 ~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l-~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~ 127 (344)
T d2ca6a1 53 ENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQAL-LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLY 127 (344)
T ss_dssp HTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHH-TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEE
T ss_pred HHHHhCCCCCEEECCCCcccccccccchHHHHHHHHH-hhCCCcccccccccccccccccchhhhhcccccchhee
Confidence 3466778888999887654322 2 223 567889999998886554 333344455555543
No 35
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.34 E-value=1.3e-07 Score=84.37 Aligned_cols=43 Identities=16% Similarity=0.059 Sum_probs=34.1
Q ss_pred cccCCCCCCCEEeecCCCCcc-----cchhHHhcCcCCcEEeccCcCcc
Q 041418 154 SGIENLFLLRYLKLNIPSLKS-----LSSSLLSNLLNLYTLDMPFSYID 197 (349)
Q Consensus 154 ~~i~~l~~L~~L~l~~~~l~~-----lp~~if~~l~~L~~L~l~~~~l~ 197 (349)
..+...++|+.|++++|.++. +...+ ...++|+.|++++|.++
T Consensus 87 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l-~~~~~L~~L~l~~n~l~ 134 (344)
T d2ca6a1 87 QALLKCPKLHTVRLSDNAFGPTAQEPLIDFL-SKHTPLEHLYLHNNGLG 134 (344)
T ss_dssp HHHTTCTTCCEEECCSCCCCTTTHHHHHHHH-HHCTTCCEEECCSSCCH
T ss_pred HHHhhCCCcccccccccccccccccchhhhh-cccccchheeccccccc
Confidence 445678899999999998764 44444 78899999999999654
No 36
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.49 E-value=2.8e-05 Score=61.07 Aligned_cols=47 Identities=23% Similarity=0.174 Sum_probs=38.3
Q ss_pred ccCCCCCCCEEeecCCCCcccch--hHHhcCcCCcEEeccCcCccccch
Q 041418 155 GIENLFLLRYLKLNIPSLKSLSS--SLLSNLLNLYTLDMPFSYIDHTVD 201 (349)
Q Consensus 155 ~i~~l~~L~~L~l~~~~l~~lp~--~if~~l~~L~~L~l~~~~l~~lp~ 201 (349)
....+++|++|++++|+|+.++. ..+..+++|++|++++|.++.+++
T Consensus 60 ~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~ 108 (162)
T d1koha1 60 IEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERE 108 (162)
T ss_dssp HHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGG
T ss_pred HHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchh
Confidence 34568899999999999987653 333889999999999999998876
No 37
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.21 E-value=4.6e-05 Score=69.16 Aligned_cols=15 Identities=0% Similarity=-0.090 Sum_probs=10.2
Q ss_pred CCCCCCCEEEecCCC
Q 041418 306 WCIKSLNKFDCWWPQ 320 (349)
Q Consensus 306 ~~l~~L~~L~l~~~~ 320 (349)
...+.++.+.++++.
T Consensus 166 ~~~~~~~~~~ls~~~ 180 (460)
T d1z7xw1 166 RAKPDFKELTVSNND 180 (460)
T ss_dssp HHCTTCCEEECCSSB
T ss_pred ccccccccccccccc
Confidence 345677788877765
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.17 E-value=1.3e-05 Score=63.02 Aligned_cols=42 Identities=14% Similarity=0.085 Sum_probs=26.6
Q ss_pred CCCCCEEeecCCCCcccchhHHhcCcCCcEEeccCcCccccch
Q 041418 159 LFLLRYLKLNIPSLKSLSSSLLSNLLNLYTLDMPFSYIDHTVD 201 (349)
Q Consensus 159 l~~L~~L~l~~~~l~~lp~~if~~l~~L~~L~l~~~~l~~lp~ 201 (349)
+..+..+....+....+ ..++.++++|++|++++|.++.++.
T Consensus 41 ~~~~~~l~~~~~~~~~l-~~~~~~~~~L~~L~Ls~N~i~~l~~ 82 (162)
T d1koha1 41 QNIDVVLNRRSSMAATL-RIIEENIPELLSLNLSNNRLYRLDD 82 (162)
T ss_dssp TTCCCCTTSHHHHHHHH-HHHHHHCTTCCCCCCCSSCCCCCSG
T ss_pred ccchhhcchhhhHhhhh-HHHHHhCCCCCEeeCCCccccCCch
Confidence 33334444433333333 3444789999999999998887753
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=94.21 E-value=0.059 Score=41.30 Aligned_cols=13 Identities=15% Similarity=0.271 Sum_probs=6.8
Q ss_pred CCCccEEEEeecC
Q 041418 244 PHSLTHLSFSNTD 256 (349)
Q Consensus 244 ~~~L~~L~L~~~~ 256 (349)
-++|++|++++|.
T Consensus 99 n~sL~~L~l~~n~ 111 (167)
T d1pgva_ 99 TQSIVEFKADNQR 111 (167)
T ss_dssp TCCCSEEECCCCS
T ss_pred CCcCCEEECCCCc
Confidence 3445555555554
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=94.15 E-value=0.014 Score=45.09 Aligned_cols=110 Identities=10% Similarity=0.018 Sum_probs=62.8
Q ss_pred hcCcCCcEEeccCc-CccccchhhhccccchhhhhCCCCCCeeeccCCCCCCCccEEEEccC--------------CCCC
Q 041418 181 SNLLNLYTLDMPFS-YIDHTVDEFWKMKKLRHLNFGLSCLKSLKLANESKMPWLSKIVLAEY--------------LFPH 245 (349)
Q Consensus 181 ~~l~~L~~L~l~~~-~l~~lp~~i~~L~~L~~L~~~l~~L~~L~l~~~~~~~~L~~L~l~~~--------------~~~~ 245 (349)
.+.++|+.|+|+++ .++. +++..+. +.| ...+.|++|++++| ...+
T Consensus 12 ~n~~~L~~L~L~~~~~i~~--~~~~~l~--~~L---------------~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~ 72 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSK--ERIRSLI--EAA---------------CNSKHIEKFSLANTAISDSEARGLIELIETSP 72 (167)
T ss_dssp TTCSSCCEEECTTCCSSCH--HHHHHHH--HHH---------------TTCSCCCEEECTTSCCBHHHHTTHHHHHHHCS
T ss_pred hCCCCCcEEEeCCCCCCCH--HHHHHHH--HHH---------------hhCCccceeeccccccchhHHHHHhhhhhhcc
Confidence 45688999999875 4432 2221110 011 23345555555555 3456
Q ss_pred CccEEEEeecCCCCCCcccccCCcccccccccccccccccccceeeeeccCCCCCC--------CcccCCCCCCCEEEec
Q 041418 246 SLTHLSFSNTDRMDDPMPVLETLPLLQKADFWTMGNAAMPKLECLIINPCAYLKKM--------PEHLWCIKSLNKFDCW 317 (349)
Q Consensus 246 ~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~~~~~~~~~~~~L~~L~l~~c~~l~~l--------p~~l~~l~~L~~L~l~ 317 (349)
.|+.|++++|.+.......+.. ....-++|++|++++|. ...+ ...+..-++|+.|+++
T Consensus 73 ~L~~L~L~~n~i~~~g~~~l~~------------aL~~n~sL~~L~l~~n~-~~~~g~~~~~~l~~~L~~n~sL~~l~l~ 139 (167)
T d1pgva_ 73 SLRVLNVESNFLTPELLARLLR------------STLVTQSIVEFKADNQR-QSVLGNQVEMDMMMAIEENESLLRVGIS 139 (167)
T ss_dssp SCCEEECCSSBCCHHHHHHHHH------------HTTTTCCCSEEECCCCS-SCCCCHHHHHHHHHHHHHCSSCCEEECC
T ss_pred cccceeeehhhcchHHHHHHHH------------HHHhCCcCCEEECCCCc-CCCccHHHHHHHHHHHHhCCCccEeeCc
Confidence 7888888888876533222210 01234668888888764 3332 2234456889999998
Q ss_pred CCCHH
Q 041418 318 WPQPE 322 (349)
Q Consensus 318 ~~~~~ 322 (349)
.+...
T Consensus 140 ~~~~~ 144 (167)
T d1pgva_ 140 FASME 144 (167)
T ss_dssp CCCHH
T ss_pred CCCch
Confidence 87644
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=93.02 E-value=0.065 Score=40.89 Aligned_cols=40 Identities=13% Similarity=0.145 Sum_probs=19.3
Q ss_pred cCCCCCCCEEeecCCCCcc-----cchhHHhcCcCCcEEeccCcCc
Q 041418 156 IENLFLLRYLKLNIPSLKS-----LSSSLLSNLLNLYTLDMPFSYI 196 (349)
Q Consensus 156 i~~l~~L~~L~l~~~~l~~-----lp~~if~~l~~L~~L~l~~~~l 196 (349)
+...++|+.|++++|.++. +-..+ ...+.++.+++++|.+
T Consensus 42 l~~n~~L~~L~Ls~n~l~~~~~~~L~~~l-~~~~~l~~l~l~~~~~ 86 (166)
T d1io0a_ 42 LKTNTYVKKFSIVGTRSNDPVAFALAEML-KVNNTLKSLNVESNFI 86 (166)
T ss_dssp HTTCCSCCEEECTTSCCCHHHHHHHHHHH-HHCSSCCEEECCSSCC
T ss_pred HhcCCccCeeeccCCcccHHHHHHHHHHH-hhcccchhhhhccccc
Confidence 3344555555555555431 21222 4455555555555533
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=89.10 E-value=0.14 Score=38.83 Aligned_cols=93 Identities=16% Similarity=0.086 Sum_probs=55.1
Q ss_pred CCCCCCCEEeecC-CCCc-----ccchhHHhcCcCCcEEeccCcCccccc-hhhhccccchhhhhCCCCCCeeeccCC--
Q 041418 157 ENLFLLRYLKLNI-PSLK-----SLSSSLLSNLLNLYTLDMPFSYIDHTV-DEFWKMKKLRHLNFGLSCLKSLKLANE-- 227 (349)
Q Consensus 157 ~~l~~L~~L~l~~-~~l~-----~lp~~if~~l~~L~~L~l~~~~l~~lp-~~i~~L~~L~~L~~~l~~L~~L~l~~~-- 227 (349)
.+.+.|++|++++ +.++ .+-..+ ...++|+.|++++|.++.-. ..+... | ...++++.+++.+.
T Consensus 14 ~~~~~L~~L~L~~~~~i~~~~~~~l~~al-~~n~~L~~L~Ls~n~l~~~~~~~L~~~-----l-~~~~~l~~l~l~~~~~ 86 (166)
T d1io0a_ 14 NNDPDLEEVNLNNIMNIPVPTLKACAEAL-KTNTYVKKFSIVGTRSNDPVAFALAEM-----L-KVNNTLKSLNVESNFI 86 (166)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHH-TTCCSCCEEECTTSCCCHHHHHHHHHH-----H-HHCSSCCEEECCSSCC
T ss_pred hcCCCCcEEEcCCCCCCCHHHHHHHHHHH-hcCCccCeeeccCCcccHHHHHHHHHH-----H-hhcccchhhhhccccc
Confidence 4567899999987 4554 233333 67889999999999665421 111110 0 22345555555411
Q ss_pred ------------CCCCCccEEEEccC----------------CCCCCccEEEEeecC
Q 041418 228 ------------SKMPWLSKIVLAEY----------------LFPHSLTHLSFSNTD 256 (349)
Q Consensus 228 ------------~~~~~L~~L~l~~~----------------~~~~~L~~L~L~~~~ 256 (349)
...++|+.+++..+ ...++|+.|++.++.
T Consensus 87 ~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 87 SGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp CHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred cchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCC
Confidence 44566776665432 456788888887664
No 43
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=21.40 E-value=83 Score=18.98 Aligned_cols=21 Identities=24% Similarity=0.384 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHhCCceeeee
Q 041418 57 EATAKKYLEQLINRGFVEANK 77 (349)
Q Consensus 57 ~~~~~~~~~~L~~~sll~~~~ 77 (349)
...+..++..|.++++|....
T Consensus 39 ~stv~~~l~~Le~kG~I~r~~ 59 (71)
T d1jhfa1 39 PNAAEEHLKALARKGVIEIVS 59 (71)
T ss_dssp HHHHHHHHHHHHHTTSEEECS
T ss_pred HHHHHHHHHHHHHCcCeecCC
Confidence 455778999999999999764
Done!