Query 041419
Match_columns 498
No_of_seqs 127 out of 1400
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 11:21:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041419.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041419hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 8.4E-69 2.9E-73 550.7 40.6 435 5-485 11-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 2.1E-64 7.3E-69 525.8 46.8 466 5-492 4-475 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 3.5E-61 1.2E-65 503.0 36.9 453 1-485 1-478 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 1.5E-60 5.2E-65 493.7 38.4 440 1-485 1-451 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 1.3E-60 4.5E-65 495.4 36.4 446 2-485 4-462 (463)
6 4amg_A Snogd; transferase, pol 100.0 1.6E-43 5.6E-48 360.9 25.1 356 5-465 20-384 (400)
7 2iya_A OLEI, oleandomycin glyc 100.0 1.4E-42 4.7E-47 357.2 30.9 393 5-481 10-417 (424)
8 1iir_A Glycosyltransferase GTF 100.0 3.8E-40 1.3E-44 338.0 33.4 363 8-463 1-382 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 9.2E-40 3.2E-44 335.3 30.9 359 8-464 1-384 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 2.9E-38 9.8E-43 322.9 27.1 360 8-482 1-379 (404)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 1.9E-37 6.5E-42 317.7 33.0 378 5-483 18-411 (415)
12 3ia7_A CALG4; glycosysltransfe 100.0 2.8E-37 9.4E-42 314.7 28.4 379 5-484 2-397 (402)
13 2yjn_A ERYCIII, glycosyltransf 100.0 1.9E-36 6.6E-41 313.0 30.2 359 5-464 18-418 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 1.2E-36 4E-41 313.4 27.1 366 1-465 1-383 (430)
15 2p6p_A Glycosyl transferase; X 100.0 8.4E-36 2.9E-40 302.4 26.5 350 8-480 1-374 (384)
16 4fzr_A SSFS6; structural genom 100.0 2.4E-34 8.1E-39 293.2 23.4 345 5-464 13-383 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 2.4E-33 8.4E-38 285.7 26.8 338 6-464 19-380 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.4E-32 4.8E-37 279.3 21.3 354 7-480 1-383 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 4.9E-30 1.7E-34 262.2 29.6 348 4-464 17-391 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 1E-28 3.4E-33 248.5 21.2 324 8-458 3-337 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 8.3E-26 2.8E-30 202.1 16.7 163 264-464 6-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 1.7E-17 5.9E-22 166.0 28.8 306 8-442 7-322 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.5 1.3E-14 4.4E-19 133.5 8.3 149 277-442 26-196 (224)
24 3hbm_A UDP-sugar hydrolase; PS 99.5 2.1E-12 7.4E-17 123.6 21.9 117 278-423 156-274 (282)
25 1v4v_A UDP-N-acetylglucosamine 99.3 6.4E-11 2.2E-15 118.7 18.1 78 354-446 255-335 (376)
26 3fro_A GLGA glycogen synthase; 99.2 5.1E-08 1.7E-12 99.1 34.0 115 354-490 311-433 (439)
27 3okp_A GDP-mannose-dependent a 99.2 2.3E-09 7.9E-14 107.5 23.5 353 4-488 1-380 (394)
28 3c48_A Predicted glycosyltrans 99.2 1.9E-08 6.4E-13 102.7 30.0 96 354-462 306-408 (438)
29 3ot5_A UDP-N-acetylglucosamine 99.2 1.4E-09 4.7E-14 110.2 19.8 108 354-484 282-392 (403)
30 2r60_A Glycosyl transferase, g 99.2 1.2E-08 4.2E-13 106.1 27.1 92 354-458 335-437 (499)
31 1vgv_A UDP-N-acetylglucosamine 99.1 1.1E-09 3.9E-14 109.7 18.4 78 354-446 263-343 (384)
32 3dzc_A UDP-N-acetylglucosamine 99.1 8.9E-10 3E-14 111.4 17.0 77 354-445 288-367 (396)
33 2gek_A Phosphatidylinositol ma 99.1 7.4E-08 2.5E-12 96.9 27.7 115 354-489 263-385 (406)
34 2jjm_A Glycosyl transferase, g 99.0 2.3E-07 7.7E-12 93.3 28.0 115 355-489 268-387 (394)
35 2iw1_A Lipopolysaccharide core 98.9 1E-06 3.5E-11 87.5 29.2 97 354-462 253-354 (374)
36 3beo_A UDP-N-acetylglucosamine 98.9 1.3E-08 4.4E-13 101.6 14.2 78 354-446 263-343 (375)
37 2iuy_A Avigt4, glycosyltransfe 98.9 6.5E-08 2.2E-12 95.3 17.7 124 283-444 165-307 (342)
38 4hwg_A UDP-N-acetylglucosamine 98.7 1.6E-07 5.5E-12 94.2 15.0 340 11-482 12-372 (385)
39 2x6q_A Trehalose-synthase TRET 98.7 6.2E-07 2.1E-11 90.7 19.6 90 354-458 293-392 (416)
40 2vsy_A XCC0866; transferase, g 98.4 0.00016 5.4E-09 76.1 29.1 123 354-491 434-563 (568)
41 3s28_A Sucrose synthase 1; gly 98.4 4E-05 1.4E-09 83.5 22.7 94 354-460 640-749 (816)
42 1rzu_A Glycogen synthase 1; gl 98.0 0.00051 1.8E-08 70.6 22.4 79 354-445 346-443 (485)
43 2f9f_A First mannosyl transfer 98.0 6.2E-05 2.1E-09 66.4 12.5 81 354-448 78-165 (177)
44 2qzs_A Glycogen synthase; glyc 98.0 0.0022 7.7E-08 65.7 26.0 80 354-446 347-445 (485)
45 3oy2_A Glycosyltransferase B73 98.0 0.0023 7.7E-08 64.1 24.7 112 356-489 256-392 (413)
46 2hy7_A Glucuronosyltransferase 97.8 0.0023 7.9E-08 64.3 22.3 74 355-447 266-354 (406)
47 3qhp_A Type 1 capsular polysac 97.2 0.0026 9.1E-08 54.7 11.2 91 355-460 57-155 (166)
48 4gyw_A UDP-N-acetylglucosamine 97.0 0.008 2.7E-07 65.0 15.3 145 277-448 520-671 (723)
49 2bfw_A GLGA glycogen synthase; 97.0 0.014 4.8E-07 51.7 13.9 91 355-459 96-195 (200)
50 3q3e_A HMW1C-like glycosyltran 96.9 0.0072 2.5E-07 63.1 12.4 146 280-457 441-600 (631)
51 3tov_A Glycosyl transferase fa 96.7 0.35 1.2E-05 47.1 22.9 107 5-136 6-115 (349)
52 2xci_A KDO-transferase, 3-deox 96.6 0.0044 1.5E-07 61.5 7.9 97 355-462 261-362 (374)
53 3rhz_A GTF3, nucleotide sugar 96.3 0.0063 2.1E-07 59.5 7.1 108 355-481 215-334 (339)
54 1psw_A ADP-heptose LPS heptosy 96.2 0.29 9.8E-06 47.4 18.6 103 8-136 1-106 (348)
55 2gt1_A Lipopolysaccharide hept 93.2 1.1 3.6E-05 42.9 13.1 42 8-49 1-43 (326)
56 2x0d_A WSAF; GT4 family, trans 88.2 1.7 5.9E-05 43.2 9.4 79 355-447 296-381 (413)
57 3vue_A GBSS-I, granule-bound s 87.4 6.7 0.00023 40.4 13.6 83 355-444 383-476 (536)
58 3vue_A GBSS-I, granule-bound s 86.2 0.44 1.5E-05 49.4 3.8 40 4-46 6-53 (536)
59 2x0d_A WSAF; GT4 family, trans 79.3 1.1 3.9E-05 44.6 3.5 42 4-46 43-89 (413)
60 3t5t_A Putative glycosyltransf 78.7 15 0.00052 37.2 11.6 111 356-487 354-473 (496)
61 3nb0_A Glycogen [starch] synth 74.8 7.3 0.00025 41.2 8.1 44 356-401 495-551 (725)
62 3zqu_A Probable aromatic acid 73.2 3.8 0.00013 36.4 4.8 40 5-46 2-41 (209)
63 1mvl_A PPC decarboxylase athal 72.9 4.4 0.00015 36.1 5.1 44 4-50 16-59 (209)
64 1p3y_1 MRSD protein; flavoprot 71.4 2.6 9E-05 37.1 3.3 48 1-50 2-49 (194)
65 1g5t_A COB(I)alamin adenosyltr 71.3 19 0.00065 31.5 8.8 102 7-121 28-131 (196)
66 3fgn_A Dethiobiotin synthetase 67.4 11 0.00038 34.5 6.8 124 6-140 24-166 (251)
67 2iz6_A Molybdenum cofactor car 65.4 64 0.0022 27.5 10.9 103 265-401 33-140 (176)
68 3dfz_A SIRC, precorrin-2 dehyd 65.2 8.2 0.00028 34.7 5.3 105 366-479 87-199 (223)
69 3kcq_A Phosphoribosylglycinami 64.6 18 0.0006 32.2 7.3 109 2-140 3-113 (215)
70 1uqt_A Alpha, alpha-trehalose- 64.5 31 0.001 34.9 10.1 107 358-487 336-454 (482)
71 2wqk_A 5'-nucleotidase SURE; S 64.1 19 0.00064 32.9 7.6 98 24-139 17-127 (251)
72 3qjg_A Epidermin biosynthesis 63.9 7.7 0.00026 33.4 4.7 43 7-51 5-47 (175)
73 1ccw_A Protein (glutamate muta 63.9 10 0.00035 31.1 5.3 40 6-46 2-41 (137)
74 4dzz_A Plasmid partitioning pr 63.3 23 0.00078 30.5 7.9 38 8-46 1-40 (206)
75 1xx6_A Thymidine kinase; NESG, 63.2 73 0.0025 27.5 11.1 45 1-46 1-46 (191)
76 3q0i_A Methionyl-tRNA formyltr 63.0 9.3 0.00032 36.4 5.5 39 3-47 3-41 (318)
77 2ywr_A Phosphoribosylglycinami 61.9 37 0.0013 30.1 9.1 107 8-140 2-111 (216)
78 2e6c_A 5'-nucleotidase SURE; S 60.7 79 0.0027 28.6 11.0 99 24-139 16-129 (244)
79 2phj_A 5'-nucleotidase SURE; S 59.6 52 0.0018 29.9 9.6 39 8-49 2-40 (251)
80 3bgw_A DNAB-like replicative h 57.4 11 0.00039 37.7 5.3 46 8-54 198-243 (444)
81 2qs7_A Uncharacterized protein 56.0 13 0.00045 30.7 4.6 46 1-47 2-47 (144)
82 3auf_A Glycinamide ribonucleot 55.4 78 0.0027 28.3 10.0 111 5-140 20-132 (229)
83 3vot_A L-amino acid ligase, BL 54.3 57 0.0019 32.0 9.9 97 5-134 3-101 (425)
84 1j9j_A Stationary phase surviV 53.4 79 0.0027 28.6 9.7 24 24-49 16-39 (247)
85 2yxb_A Coenzyme B12-dependent 53.4 11 0.00038 31.8 3.8 41 5-46 16-56 (161)
86 2vqe_B 30S ribosomal protein S 52.9 18 0.0006 33.1 5.2 35 108-142 156-192 (256)
87 3mcu_A Dipicolinate synthase, 49.7 16 0.00056 32.3 4.4 40 5-46 3-43 (207)
88 3lqk_A Dipicolinate synthase s 48.9 24 0.00083 31.0 5.4 42 5-47 5-46 (201)
89 1sbz_A Probable aromatic acid 47.7 19 0.00063 31.6 4.4 39 8-47 1-39 (197)
90 2b8t_A Thymidine kinase; deoxy 47.6 1.1E+02 0.0039 27.0 9.8 38 9-47 13-51 (223)
91 3bfv_A CAPA1, CAPB2, membrane 47.2 85 0.0029 28.7 9.3 40 6-46 80-121 (271)
92 1qzu_A Hypothetical protein MD 46.9 17 0.00059 32.1 4.1 44 5-50 17-61 (206)
93 3da8_A Probable 5'-phosphoribo 46.6 34 0.0011 30.4 6.0 111 4-140 9-120 (215)
94 2i2x_B MTAC, methyltransferase 46.6 27 0.00092 32.0 5.6 41 5-46 121-161 (258)
95 4ds3_A Phosphoribosylglycinami 45.9 68 0.0023 28.2 7.9 111 5-140 5-117 (209)
96 1y80_A Predicted cobalamin bin 45.5 24 0.00081 31.0 4.9 40 6-46 87-126 (210)
97 1jkx_A GART;, phosphoribosylgl 45.4 1E+02 0.0035 27.1 9.1 108 8-140 1-110 (212)
98 2r8r_A Sensor protein; KDPD, P 44.7 30 0.001 31.1 5.3 41 5-46 4-44 (228)
99 3mc3_A DSRE/DSRF-like family p 44.4 30 0.001 28.0 5.0 29 17-46 28-56 (134)
100 3pdi_B Nitrogenase MOFE cofact 43.8 1.2E+02 0.004 30.3 10.2 87 7-137 313-399 (458)
101 3tqr_A Phosphoribosylglycinami 43.3 71 0.0024 28.3 7.6 110 5-140 3-114 (215)
102 1l5x_A SurviVal protein E; str 43.1 68 0.0023 29.7 7.7 24 24-49 16-39 (280)
103 1fmt_A Methionyl-tRNA FMet for 42.8 80 0.0027 29.7 8.4 106 6-141 2-113 (314)
104 3av3_A Phosphoribosylglycinami 42.6 1.3E+02 0.0043 26.5 9.2 108 8-140 4-113 (212)
105 1g63_A Epidermin modifying enz 41.8 23 0.00079 30.5 4.0 45 8-54 3-47 (181)
106 2ejb_A Probable aromatic acid 41.5 34 0.0012 29.7 5.1 39 8-48 2-40 (189)
107 1id1_A Putative potassium chan 41.4 21 0.00073 29.3 3.7 35 5-45 1-35 (153)
108 1kjn_A MTH0777; hypotethical p 41.1 19 0.00065 29.8 3.1 41 5-46 4-46 (157)
109 4b4o_A Epimerase family protei 40.2 26 0.00087 32.4 4.5 33 8-45 1-33 (298)
110 3u7q_B Nitrogenase molybdenum- 39.7 2.2E+02 0.0076 28.8 11.7 34 7-46 364-397 (523)
111 2lnd_A De novo designed protei 39.2 38 0.0013 24.5 4.1 49 391-444 50-100 (112)
112 3ezx_A MMCP 1, monomethylamine 38.7 35 0.0012 30.2 4.9 46 4-50 89-134 (215)
113 3bbn_B Ribosomal protein S2; s 38.3 90 0.0031 27.9 7.5 32 109-140 156-189 (231)
114 1ydh_A AT5G11950; structural g 38.0 1.3E+02 0.0044 26.5 8.5 45 356-400 89-143 (216)
115 3bh0_A DNAB-like replicative h 37.6 28 0.00095 32.8 4.3 42 8-50 69-110 (315)
116 1qgu_B Protein (nitrogenase mo 37.4 2.6E+02 0.0088 28.3 11.8 96 7-137 360-465 (519)
117 1mio_A Nitrogenase molybdenum 36.3 1.2E+02 0.0042 30.8 9.2 34 98-136 446-479 (533)
118 3la6_A Tyrosine-protein kinase 36.1 1.4E+02 0.0046 27.6 8.8 39 7-46 91-131 (286)
119 1meo_A Phosophoribosylglycinam 35.4 2.2E+02 0.0077 24.8 10.0 108 8-140 1-110 (209)
120 3n7t_A Macrophage binding prot 34.1 66 0.0023 29.1 6.1 43 3-46 4-58 (247)
121 3cio_A ETK, tyrosine-protein k 33.6 1.6E+02 0.0053 27.3 8.8 39 7-46 103-143 (299)
122 4egb_A DTDP-glucose 4,6-dehydr 33.4 1.9E+02 0.0064 26.8 9.6 33 6-43 23-57 (346)
123 3lrx_A Putative hydrogenase; a 33.1 35 0.0012 28.4 3.8 37 7-47 23-59 (158)
124 2bw0_A 10-FTHFDH, 10-formyltet 32.8 68 0.0023 30.4 6.2 109 3-141 18-131 (329)
125 3iqw_A Tail-anchored protein t 32.7 1.8E+02 0.006 27.5 9.1 39 8-47 16-55 (334)
126 2g1u_A Hypothetical protein TM 31.6 46 0.0016 27.2 4.3 36 4-45 16-51 (155)
127 1qkk_A DCTD, C4-dicarboxylate 31.1 1.4E+02 0.0048 23.7 7.3 48 391-445 74-121 (155)
128 2q6t_A DNAB replication FORK h 30.4 18 0.00061 36.1 1.7 42 8-49 201-242 (444)
129 1bg6_A N-(1-D-carboxylethyl)-L 30.4 35 0.0012 32.5 3.7 34 5-44 2-35 (359)
130 1pno_A NAD(P) transhydrogenase 29.8 49 0.0017 27.9 3.9 38 8-46 24-64 (180)
131 3kjh_A CO dehydrogenase/acetyl 29.8 39 0.0013 30.0 3.8 38 8-46 1-38 (254)
132 3r8n_B 30S ribosomal protein S 29.7 2.7E+02 0.0092 24.5 9.1 33 109-141 148-182 (218)
133 1d4o_A NADP(H) transhydrogenas 29.1 51 0.0017 27.9 3.9 38 8-46 23-63 (184)
134 2l2q_A PTS system, cellobiose- 29.0 66 0.0023 24.8 4.5 38 5-43 2-39 (109)
135 2a33_A Hypothetical protein; s 29.0 1.9E+02 0.0064 25.5 8.0 44 357-400 94-147 (215)
136 3l7i_A Teichoic acid biosynthe 28.5 54 0.0019 34.9 5.2 114 358-485 603-719 (729)
137 2hy5_A Putative sulfurtransfer 28.3 92 0.0031 24.7 5.4 34 12-46 6-42 (130)
138 2hy5_B Intracellular sulfur ox 28.0 52 0.0018 26.7 3.8 35 11-46 10-46 (136)
139 4hb9_A Similarities with proba 28.0 40 0.0014 32.4 3.7 31 7-43 1-31 (412)
140 1lss_A TRK system potassium up 27.8 42 0.0014 26.5 3.3 34 6-45 3-36 (140)
141 3kkl_A Probable chaperone prot 27.6 91 0.0031 28.1 5.8 39 7-46 3-52 (244)
142 3e2i_A Thymidine kinase; Zn-bi 27.5 1.9E+02 0.0064 25.6 7.6 37 9-46 29-66 (219)
143 2fsv_C NAD(P) transhydrogenase 26.8 57 0.002 28.1 3.9 38 8-46 47-87 (203)
144 1mio_B Nitrogenase molybdenum 26.8 2.7E+02 0.0093 27.5 9.7 34 99-137 376-409 (458)
145 3igf_A ALL4481 protein; two-do 26.8 95 0.0033 30.0 6.1 36 8-44 2-38 (374)
146 3g0o_A 3-hydroxyisobutyrate de 26.4 36 0.0012 31.7 3.0 38 1-44 1-38 (303)
147 1djl_A Transhydrogenase DIII; 26.2 60 0.002 28.1 3.9 38 8-46 46-86 (207)
148 2gk4_A Conserved hypothetical 26.0 77 0.0026 28.4 4.9 26 18-46 28-53 (232)
149 3gpi_A NAD-dependent epimerase 26.0 71 0.0024 29.0 4.9 34 6-45 2-35 (286)
150 2w36_A Endonuclease V; hypoxan 25.6 81 0.0028 28.1 4.9 42 97-138 90-138 (225)
151 2bln_A Protein YFBG; transfera 25.1 1.5E+02 0.005 27.7 6.9 40 99-140 66-106 (305)
152 2bru_C NAD(P) transhydrogenase 25.1 56 0.0019 27.6 3.4 38 8-46 31-71 (186)
153 1p9o_A Phosphopantothenoylcyst 25.0 53 0.0018 31.0 3.8 39 8-47 37-90 (313)
154 3lyu_A Putative hydrogenase; t 24.8 70 0.0024 25.9 4.1 37 7-47 18-54 (142)
155 1q57_A DNA primase/helicase; d 24.7 40 0.0014 34.0 3.2 42 9-50 244-285 (503)
156 1p3y_1 MRSD protein; flavoprot 24.6 3.3E+02 0.011 23.3 8.7 82 362-445 73-186 (194)
157 3sbx_A Putative uncharacterize 24.6 2E+02 0.0067 24.8 7.1 43 358-400 94-146 (189)
158 1hdo_A Biliverdin IX beta redu 24.4 86 0.0029 26.5 4.9 33 8-45 4-36 (206)
159 3goc_A Endonuclease V; alpha-b 24.0 1.1E+02 0.0037 27.5 5.3 42 97-138 94-142 (237)
160 2q5c_A NTRC family transcripti 23.9 83 0.0028 27.2 4.6 42 99-143 130-172 (196)
161 3qua_A Putative uncharacterize 23.7 2.1E+02 0.0073 24.8 7.2 44 357-400 102-155 (199)
162 1ehi_A LMDDL2, D-alanine:D-lac 23.7 68 0.0023 30.9 4.5 39 6-45 2-45 (377)
163 3ahc_A Phosphoketolase, xylulo 23.5 7.2E+02 0.025 26.8 12.8 83 375-472 726-813 (845)
164 1rcu_A Conserved hypothetical 23.5 55 0.0019 28.5 3.3 36 365-400 112-150 (195)
165 1o97_C Electron transferring f 23.5 1E+02 0.0036 28.1 5.4 40 98-139 102-147 (264)
166 1q74_A 1D-MYO-inosityl 2-aceta 23.4 1.3E+02 0.0043 28.1 6.1 21 94-116 115-135 (303)
167 2vo1_A CTP synthase 1; pyrimid 23.2 87 0.003 28.8 4.6 44 5-49 20-66 (295)
168 3bq9_A Predicted rossmann fold 22.9 2.3E+02 0.0079 28.0 7.9 42 358-399 231-285 (460)
169 4da9_A Short-chain dehydrogena 22.8 1E+02 0.0034 28.1 5.3 33 8-44 29-61 (280)
170 4dqx_A Probable oxidoreductase 22.6 1.1E+02 0.0036 27.9 5.4 39 2-44 21-59 (277)
171 3u5t_A 3-oxoacyl-[acyl-carrier 22.4 70 0.0024 29.0 4.1 40 1-44 20-59 (267)
172 3eag_A UDP-N-acetylmuramate:L- 22.1 87 0.003 29.5 4.8 35 6-45 3-37 (326)
173 2xci_A KDO-transferase, 3-deox 21.8 1.5E+02 0.0053 28.2 6.6 34 9-45 42-75 (374)
174 3lf2_A Short chain oxidoreduct 21.3 1.2E+02 0.0041 27.2 5.5 40 1-44 1-40 (265)
175 4gi5_A Quinone reductase; prot 21.2 1.3E+02 0.0045 27.7 5.6 38 5-43 20-60 (280)
176 1e2b_A Enzyme IIB-cellobiose; 21.1 1.7E+02 0.0057 22.4 5.4 39 6-45 2-40 (106)
177 2zts_A Putative uncharacterize 21.0 2.2E+02 0.0074 24.7 7.1 43 8-51 31-74 (251)
178 1eiw_A Hypothetical protein MT 21.0 2.6E+02 0.0089 21.6 6.5 64 369-444 37-109 (111)
179 3l6d_A Putative oxidoreductase 20.7 56 0.0019 30.5 3.1 37 1-43 3-39 (306)
180 4dll_A 2-hydroxy-3-oxopropiona 20.7 1E+02 0.0036 28.8 5.0 34 5-44 29-62 (320)
181 3tov_A Glycosyl transferase fa 20.6 1.7E+02 0.0058 27.7 6.5 100 7-139 185-288 (349)
182 2r85_A PURP protein PF1517; AT 20.6 79 0.0027 29.4 4.2 33 7-46 2-34 (334)
183 3ghy_A Ketopantoate reductase 20.5 58 0.002 30.8 3.2 34 6-45 2-35 (335)
184 1efv_B Electron transfer flavo 20.4 1.3E+02 0.0045 27.3 5.4 39 98-138 106-150 (255)
185 1efp_B ETF, protein (electron 20.2 1.3E+02 0.0045 27.2 5.3 38 99-138 104-147 (252)
186 3ih5_A Electron transfer flavo 20.0 1.4E+02 0.0049 26.2 5.4 108 10-136 6-120 (217)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=8.4e-69 Score=550.66 Aligned_cols=435 Identities=25% Similarity=0.379 Sum_probs=348.7
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCC--CEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCCCC
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHHD--VQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVNPD 82 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~G--h~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 82 (498)
..++||+++|+|++||++|+++||+.|+++ | +.|||++++.+..++.+..-. ...+++|++++..-.++. ...
T Consensus 11 ~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~-g~~~~vT~~~t~~~~~~~~~~~~~---~~~~i~~~~ipdglp~~~-~~~ 85 (454)
T 3hbf_A 11 NNLLHVAVLAFPFGTHAAPLLSLVKKIATE-APKVTFSFFCTTTTNDTLFSRSNE---FLPNIKYYNVHDGLPKGY-VSS 85 (454)
T ss_dssp -CCCEEEEECCCSSSSHHHHHHHHHHHHHH-CTTSEEEEEECHHHHHHSCSSSSC---CCTTEEEEECCCCCCTTC-CCC
T ss_pred CCCCEEEEEcCCcccHHHHHHHHHHHHHhC-CCCEEEEEEeCHHHHHhhhccccc---CCCCceEEecCCCCCCCc-ccc
Confidence 457899999999999999999999999999 9 999999998655443322111 124799999984322221 111
Q ss_pred CchHHHHHHHHHHhhHHHHHHHHhc----CCCCcEEEeCCCchhHHHHHHHhCCcEEEEecchHHHHHHHhhhhhhhhcc
Q 041419 83 ASLGEKILVLMHKSLPALRSAISAM----KFRPTALIVDFFGTEAMDVADEFGLLKYMFIASNAWFLACFIHAPAIDKKL 158 (498)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~----~~~pD~vI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 158 (498)
.+....+..++....+.+++.++++ ..++||||+|.++.|+..+|+++|||++.|++++++.++.+++.+.+....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~ 165 (454)
T 3hbf_A 86 GNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKT 165 (454)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTC
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhc
Confidence 1222334444444444555555543 458999999999999999999999999999999999999988877655442
Q ss_pred cccccCCCCCcc-cCCCCCCCCcccccccccCC-CchhHHHHHHHhhcccCCcEEEEcCccccChHHHHhhhhccccCCC
Q 041419 159 LTDEHFNLEKPM-ELPGCMPVRFQDSLELFLHP-NEPIFDFISSIGMKMSLSDGILVNTWDDLEPKTLGSLRDDNLLGRV 236 (498)
Q Consensus 159 ~~~~~~~~~~~~-~~pg~~~l~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~lv~s~~~l~~~~~~~~~~~~~~~r~ 236 (498)
..........+ .+||+++++..+++..+... ...+..++.+..+...+.+++++||+++||++.+..+++.
T Consensus 166 -~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~------ 238 (454)
T 3hbf_A 166 -GSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSK------ 238 (454)
T ss_dssp -CHHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTT------
T ss_pred -CCCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhc------
Confidence 11001112233 48999999999999877634 4455566577888889999999999999999988877654
Q ss_pred CCCCEEEeccCCCCCCCCCCCCCCCCCcchhhHhhhcccCCCCcEEEEEccCCCCCCHHHHHHHHHHHHhcCCcEEEEEc
Q 041419 237 CKAPVYAIGPLVRSPDVASPSTKTSPSDSRVIILDWLNEQPSQSVIYVSFGSGGTLSAKQMTELAWSLELSQQRFIWVVR 316 (498)
Q Consensus 237 ~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~ 316 (498)
.|++++|||++..... .....+.+|.+||+.++++++|||||||+...+.+++.+++.+|++.+.+|+|+++
T Consensus 239 -~~~v~~vGPl~~~~~~-------~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~ 310 (454)
T 3hbf_A 239 -FKLLLNVGPFNLTTPQ-------RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFR 310 (454)
T ss_dssp -SSCEEECCCHHHHSCC-------SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECC
T ss_pred -CCCEEEECCccccccc-------ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Confidence 6789999999864320 11233678999999988899999999999988999999999999999999999996
Q ss_pred CCCCCCCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCccHHHHhccCCcceeeecCCcchHHHHHhhCCcEE
Q 041419 317 PPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWAPQAEILAHPSVGGFLSHCGWNSTVESIVNGVPMI 396 (498)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v 396 (498)
.. ....+|++|.++.++ ++++.+|+||.++|+|+++++|||||||||++|++++|||||
T Consensus 311 ~~--------------------~~~~lp~~~~~~~~~-~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i 369 (454)
T 3hbf_A 311 GD--------------------PKEKLPKGFLERTKT-KGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMI 369 (454)
T ss_dssp SC--------------------HHHHSCTTHHHHTTT-TEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEE
T ss_pred Cc--------------------chhcCCHhHHhhcCC-ceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEe
Confidence 43 235688899888775 566669999999999999999999999999999999999999
Q ss_pred eccccccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhhccCCchHHH
Q 041419 397 AWPLHAEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGAQKATSNSGSSYKS 476 (498)
Q Consensus 397 ~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~ 476 (498)
++|+++||+.||+++++.+|+|+.++. +.+++++|+++|+++|.|+++ ++||+||+++++++++++++||+|+++
T Consensus 370 ~~P~~~DQ~~Na~~v~~~~g~Gv~l~~----~~~~~~~l~~av~~ll~~~~~-~~~r~~a~~l~~~~~~a~~~gGsS~~~ 444 (454)
T 3hbf_A 370 SRPFFGDQGLNTILTESVLEIGVGVDN----GVLTKESIKKALELTMSSEKG-GIMRQKIVKLKESAFKAVEQNGTSAMD 444 (454)
T ss_dssp ECCCSTTHHHHHHHHHTTSCSEEECGG----GSCCHHHHHHHHHHHHSSHHH-HHHHHHHHHHHHHHHHHTSTTSHHHHH
T ss_pred cCcccccHHHHHHHHHHhhCeeEEecC----CCCCHHHHHHHHHHHHCCChH-HHHHHHHHHHHHHHHHhhccCCCHHHH
Confidence 999999999999999533799999873 679999999999999998655 689999999999999999999999999
Q ss_pred HHHHHHHHH
Q 041419 477 LSQVAKQCE 485 (498)
Q Consensus 477 ~~~~~~~~~ 485 (498)
+++|++++.
T Consensus 445 l~~~v~~i~ 453 (454)
T 3hbf_A 445 FTTLIQIVT 453 (454)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999999873
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=2.1e-64 Score=525.82 Aligned_cols=466 Identities=41% Similarity=0.695 Sum_probs=351.1
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCC--CcccccccccCCCCCCCeEEEecCCCCCCCCCCCC
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASH--DDASNSNVHAVPNNNNLFNAVTLPLANISSLVNPD 82 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 82 (498)
.+++||+++|+|++||++|+++||++|++|+||+|||++++.+ .+.+.+. ... ...+++|+.++....++. ...
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~-~~~--~~~~i~~~~l~~~~~~~~-~~~ 79 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTV-LDS--LPSSISSVFLPPVDLTDL-SSS 79 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHH-HC---CCTTEEEEECCCCCCTTS-CTT
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhh-ccc--cCCCceEEEcCCCCCCCC-CCc
Confidence 4558999999999999999999999999732899999999874 3322211 111 013899999886432222 222
Q ss_pred CchHHHHHHHHHHhhHHHHHHHHhc--CCCC-cEEEeCCCchhHHHHHHHhCCcEEEEecchHHHHHHHhhhhhhhhccc
Q 041419 83 ASLGEKILVLMHKSLPALRSAISAM--KFRP-TALIVDFFGTEAMDVADEFGLLKYMFIASNAWFLACFIHAPAIDKKLL 159 (498)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~--~~~p-D~vI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 159 (498)
.+....+........+.++++++++ ..++ |+||+|.+..|+..+|+++|||++.+++++++..+.++++|.+.+..
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~- 158 (480)
T 2vch_A 80 TRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETV- 158 (480)
T ss_dssp CCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHC-
T ss_pred hhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcC-
Confidence 2333334445566677888888774 3477 99999999999999999999999999999998888877777655433
Q ss_pred ccccCCCCCcccCCCCCCCCcccccccccCC-CchhHHHHHHHhhcccCCcEEEEcCccccChHHHHhhhhccccCCCCC
Q 041419 160 TDEHFNLEKPMELPGCMPVRFQDSLELFLHP-NEPIFDFISSIGMKMSLSDGILVNTWDDLEPKTLGSLRDDNLLGRVCK 238 (498)
Q Consensus 160 ~~~~~~~~~~~~~pg~~~l~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~lv~s~~~l~~~~~~~~~~~~~~~r~~~ 238 (498)
..++........+||++++...+++..+..+ ...+..+ .+....+++..++++||+.++++..+..+.+ +++.+
T Consensus 159 ~~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~----~~~~~ 233 (480)
T 2vch_A 159 SCEFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWL-LHNTKRYKEAEGILVNTFFELEPNAIKALQE----PGLDK 233 (480)
T ss_dssp CSCGGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHH-HHHHHHGGGCSEEEESCCTTTSHHHHHHHHS----CCTTC
T ss_pred CCcccccCCcccCCCCCCCChHHCchhhhcCCchHHHHH-HHHHHhcccCCEEEEcCHHHHhHHHHHHHHh----cccCC
Confidence 2222211223457888888888887776555 3333333 5566677788999999999999988887776 23335
Q ss_pred CCEEEeccCCCCCCCCCCCCCCCCCcchhhHhhhcccCCCCcEEEEEccCCCCCCHHHHHHHHHHHHhcCCcEEEEEcCC
Q 041419 239 APVYAIGPLVRSPDVASPSTKTSPSDSRVIILDWLNEQPSQSVIYVSFGSGGTLSAKQMTELAWSLELSQQRFIWVVRPP 318 (498)
Q Consensus 239 p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 318 (498)
|++++|||++..... . .....+.++.+||++++++++|||||||+...+.+++.+++++|+..+.+|+|+++..
T Consensus 234 ~~v~~vGpl~~~~~~-----~-~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~ 307 (480)
T 2vch_A 234 PPVYPVGPLVNIGKQ-----E-AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSP 307 (480)
T ss_dssp CCEEECCCCCCCSCS-----C-C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CcEEEEecccccccc-----c-cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCc
Confidence 679999999865320 0 0023567899999998888999999999988899999999999999999999999764
Q ss_pred CCCCCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCccHHHHhccCCcceeeecCCcchHHHHHhhCCcEEec
Q 041419 319 VENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWAPQAEILAHPSVGGFLSHCGWNSTVESIVNGVPMIAW 398 (498)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~ 398 (498)
..... ..++..++ .......+|++|.++.++.++++.+|+||.+||+|+++++|||||||||++||+++|||||++
T Consensus 308 ~~~~~-~~~~~~~~---~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~ 383 (480)
T 2vch_A 308 SGIAN-SSYFDSHS---QTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAW 383 (480)
T ss_dssp CSSTT-TTTTCC-----CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred ccccc-cccccccc---ccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEec
Confidence 21000 00000000 000123689999999888888887799999999999999999999999999999999999999
Q ss_pred cccccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhhccCCchHHHHH
Q 041419 399 PLHAEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGAQKATSNSGSSYKSLS 478 (498)
Q Consensus 399 P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~ 478 (498)
|+++||+.||+++++++|+|+.++. .+++.+++++|+++|+++|.++++ ++||+||+++++++++++++||++..+++
T Consensus 384 P~~~DQ~~na~~l~~~~G~g~~l~~-~~~~~~~~~~l~~av~~vl~~~~~-~~~r~~a~~l~~~~~~a~~~gGss~~~~~ 461 (480)
T 2vch_A 384 PLYAEQKMNAVLLSEDIRAALRPRA-GDDGLVRREEVARVVKGLMEGEEG-KGVRNKMKELKEAACRVLKDDGTSTKALS 461 (480)
T ss_dssp CCSTTHHHHHHHHHHTTCCEECCCC-CTTSCCCHHHHHHHHHHHHTSTHH-HHHHHHHHHHHHHHHHHTSTTSHHHHHHH
T ss_pred cccccchHHHHHHHHHhCeEEEeec-ccCCccCHHHHHHHHHHHhcCcch-HHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 9999999999997569999999863 111368999999999999986555 89999999999999999999999999999
Q ss_pred HHHHHHHhhcccee
Q 041419 479 QVAKQCEKSLQELV 492 (498)
Q Consensus 479 ~~~~~~~~~~~~~~ 492 (498)
+|++++.+..+++-
T Consensus 462 ~~v~~~~~~~~~~~ 475 (480)
T 2vch_A 462 LVALKWKAHKKELE 475 (480)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHhh
Confidence 99999987444443
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=3.5e-61 Score=502.97 Aligned_cols=453 Identities=26% Similarity=0.478 Sum_probs=328.9
Q ss_pred CCCC-CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccC-CCCCCCeEEEecCCCCCCCC
Q 041419 1 MQST-KLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAV-PNNNNLFNAVTLPLANISSL 78 (498)
Q Consensus 1 ~~~~-~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~ 78 (498)
|+.. ++++||+++|+|++||++|++.||++|++| ||+|||++++.+.+++.+..-.. .....+++|+.++.. .+..
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~r-G~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~-lp~~ 78 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLR-GFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDG-LTPM 78 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEEEHHHHHHHC------------CEEEEEECCC-CC--
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhC-CCeEEEEeCCchhhhhccccccccccCCCceEEEECCCC-CCCc
Confidence 4543 667899999999999999999999999999 99999999987654432220000 000127899888741 1110
Q ss_pred ---CCCCCchHHHHHHHHHHhhHHHHHHHHhc-----CCCCcEEEeCCCchhHHHHHHHhCCcEEEEecchHHHHHHHhh
Q 041419 79 ---VNPDASLGEKILVLMHKSLPALRSAISAM-----KFRPTALIVDFFGTEAMDVADEFGLLKYMFIASNAWFLACFIH 150 (498)
Q Consensus 79 ---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~~~pD~vI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~ 150 (498)
.....+....+..+...+.+.++++++++ ..+||+||+|.++.|+..+|+++|||++.+++++++....+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~ 158 (482)
T 2pq6_A 79 EGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMH 158 (482)
T ss_dssp -------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTT
T ss_pred ccccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHH
Confidence 01012222222222245566777888765 1489999999999999999999999999999999887766554
Q ss_pred hhhhhhcc-cccccC---C---CCCcc-cCCCCCCCCcccccccccCC--CchhHHHHHHHhhcccCCcEEEEcCccccC
Q 041419 151 APAIDKKL-LTDEHF---N---LEKPM-ELPGCMPVRFQDSLELFLHP--NEPIFDFISSIGMKMSLSDGILVNTWDDLE 220 (498)
Q Consensus 151 ~p~~~~~~-~~~~~~---~---~~~~~-~~pg~~~l~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~lv~s~~~l~ 220 (498)
.|...... .+.... . ..... .+|++++++..+++..+... ...+..++.+..+...+.+++++||+++||
T Consensus 159 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le 238 (482)
T 2pq6_A 159 FRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELE 238 (482)
T ss_dssp HHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGG
T ss_pred HHHHHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHh
Confidence 44321110 011100 0 01111 35777777777776655432 333444435556677788999999999999
Q ss_pred hHHHHhhhhccccCCCCCCCEEEeccCCCC-CCCCC----CCCCCCCCcchhhHhhhcccCCCCcEEEEEccCCCCCCHH
Q 041419 221 PKTLGSLRDDNLLGRVCKAPVYAIGPLVRS-PDVAS----PSTKTSPSDSRVIILDWLNEQPSQSVIYVSFGSGGTLSAK 295 (498)
Q Consensus 221 ~~~~~~~~~~~~~~r~~~p~v~~vGpl~~~-~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~ 295 (498)
++.+..+++. .|++++|||++.. +.... +......++.+.+|.+||++++++++|||||||+...+.+
T Consensus 239 ~~~~~~~~~~-------~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~ 311 (482)
T 2pq6_A 239 SDVINALSST-------IPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPE 311 (482)
T ss_dssp HHHHHHHHTT-------CTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHH
T ss_pred HHHHHHHHHh-------CCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHH
Confidence 9887776654 5679999999753 11000 0000000123457999999988889999999999888888
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCCCCCCCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCccHHHHhccCCcce
Q 041419 296 QMTELAWSLELSQQRFIWVVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWAPQAEILAHPSVGG 375 (498)
Q Consensus 296 ~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~ 375 (498)
++.+++.+|+..+.+|+|+++..... + ....+|++|.++.++ |+.+.+|+||.++|+|+++++
T Consensus 312 ~~~~~~~~l~~~~~~~l~~~~~~~~~--------------~--~~~~l~~~~~~~~~~-~~~v~~~~pq~~~L~h~~~~~ 374 (482)
T 2pq6_A 312 QLLEFAWGLANCKKSFLWIIRPDLVI--------------G--GSVIFSSEFTNEIAD-RGLIASWCPQDKVLNHPSIGG 374 (482)
T ss_dssp HHHHHHHHHHHTTCEEEEECCGGGST--------------T--TGGGSCHHHHHHHTT-TEEEESCCCHHHHHTSTTEEE
T ss_pred HHHHHHHHHHhcCCcEEEEEcCCccc--------------c--ccccCcHhHHHhcCC-CEEEEeecCHHHHhcCCCCCE
Confidence 99999999999999999999643110 1 113478888887765 677779999999999999999
Q ss_pred eeecCCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHH
Q 041419 376 FLSHCGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVR 455 (498)
Q Consensus 376 ~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~ 455 (498)
||||||+||++||+++|||||++|+++||+.||+++++++|+|+.++ ..+++++|+++|+++|.|+++ ++||+|
T Consensus 375 ~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-----~~~~~~~l~~~i~~ll~~~~~-~~~r~~ 448 (482)
T 2pq6_A 375 FLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-----TNVKREELAKLINEVIAGDKG-KKMKQK 448 (482)
T ss_dssp EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-----SSCCHHHHHHHHHHHHTSHHH-HHHHHH
T ss_pred EEecCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-----CCCCHHHHHHHHHHHHcCCcH-HHHHHH
Confidence 99999999999999999999999999999999999855799999985 468999999999999998654 689999
Q ss_pred HHHHHHHHHHhhccCCchHHHHHHHHHHHH
Q 041419 456 AMELKYGAQKATSNSGSSYKSLSQVAKQCE 485 (498)
Q Consensus 456 a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~ 485 (498)
|+++++++++++++||+|++++++|++++.
T Consensus 449 a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 478 (482)
T 2pq6_A 449 AMELKKKAEENTRPGGCSYMNLNKVIKDVL 478 (482)
T ss_dssp HHHHHHHHHHHTSTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 999999999999999999999999999873
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.5e-60 Score=493.66 Aligned_cols=440 Identities=25% Similarity=0.395 Sum_probs=323.2
Q ss_pred CCCCCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCE--EEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCC
Q 041419 1 MQSTKLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQ--VTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSL 78 (498)
Q Consensus 1 ~~~~~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~--Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 78 (498)
|..+++++||+++|+|++||++|+++||++|++| ||+ |||++++.+.+++.+..... ...+++|+.++..-.+..
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~r-Gh~v~vt~~~t~~~~~~~~~~~~~~--~~~~i~~~~i~~glp~~~ 77 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAA-APHAVFSFFSTSQSNASIFHDSMHT--MQCNIKSYDISDGVPEGY 77 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHH-CTTSEEEEEECHHHHHHHC---------CTTEEEEECCCCCCTTC
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhC-CCCeEEEEEeCchhHHHhhcccccc--CCCceEEEeCCCCCCCcc
Confidence 6666778999999999999999999999999999 755 68888864333322211111 013789988874211111
Q ss_pred CCCCCchHHHHHHHHHHhhHHHHHHHHh----cCCCCcEEEeCCCchhHHHHHHHhCCcEEEEecchHHHHHHHhhhhhh
Q 041419 79 VNPDASLGEKILVLMHKSLPALRSAISA----MKFRPTALIVDFFGTEAMDVADEFGLLKYMFIASNAWFLACFIHAPAI 154 (498)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~pD~vI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~ 154 (498)
.........+..+.....+.+++++++ ...+||+||+|.++.|+..+|+++|||++.+++++++..+.+++.+.+
T Consensus 78 -~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 156 (456)
T 2c1x_A 78 -VFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEI 156 (456)
T ss_dssp -CCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred -cccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHH
Confidence 001122222222333333344444443 235899999999999999999999999999999988777666554543
Q ss_pred hhcc-cccccCCCCCc-ccCCCCCCCCcccccccccCC--CchhHHHHHHHhhcccCCcEEEEcCccccChHHHHhhhhc
Q 041419 155 DKKL-LTDEHFNLEKP-MELPGCMPVRFQDSLELFLHP--NEPIFDFISSIGMKMSLSDGILVNTWDDLEPKTLGSLRDD 230 (498)
Q Consensus 155 ~~~~-~~~~~~~~~~~-~~~pg~~~l~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~lv~s~~~l~~~~~~~~~~~ 230 (498)
.... ........... ..+||+++++..+++..+... ...+..+..+......+.+++++||++++|+..+..+++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~ 236 (456)
T 2c1x_A 157 REKIGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSK 236 (456)
T ss_dssp HHHHCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHH
T ss_pred HhccCCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhc
Confidence 3221 01000111112 247888877777777654333 3344555455556667889999999999999887776654
Q ss_pred cccCCCCCCCEEEeccCCCCCCCCCCCCCCCCCcchhhHhhhcccCCCCcEEEEEccCCCCCCHHHHHHHHHHHHhcCCc
Q 041419 231 NLLGRVCKAPVYAIGPLVRSPDVASPSTKTSPSDSRVIILDWLNEQPSQSVIYVSFGSGGTLSAKQMTELAWSLELSQQR 310 (498)
Q Consensus 231 ~~~~r~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~ 310 (498)
.|++++|||+...... .....+.++.+|++.++++++|||||||+...+.+++.+++++|+..+.+
T Consensus 237 -------~~~~~~vGpl~~~~~~-------~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~ 302 (456)
T 2c1x_A 237 -------LKTYLNIGPFNLITPP-------PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVP 302 (456)
T ss_dssp -------SSCEEECCCHHHHC----------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCC
T ss_pred -------CCCEEEecCcccCccc-------ccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCe
Confidence 5689999999864320 00122457999999888889999999999888888999999999999999
Q ss_pred EEEEEcCCCCCCCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCccHHHHhccCCcceeeecCCcchHHHHHh
Q 041419 311 FIWVVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWAPQAEILAHPSVGGFLSHCGWNSTVESIV 390 (498)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~ 390 (498)
|+|+++.. ....+|++|.++.+. |+.+.+|+||.++|+|+++++||||||+||++||++
T Consensus 303 ~lw~~~~~--------------------~~~~l~~~~~~~~~~-~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~ 361 (456)
T 2c1x_A 303 FIWSLRDK--------------------ARVHLPEGFLEKTRG-YGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVA 361 (456)
T ss_dssp EEEECCGG--------------------GGGGSCTTHHHHHTT-TEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHH
T ss_pred EEEEECCc--------------------chhhCCHHHHhhcCC-ceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHH
Confidence 99999543 124578888777654 677779999999999999999999999999999999
Q ss_pred hCCcEEeccccccchhhHHHHhhhh-cceEEeeccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhhcc
Q 041419 391 NGVPMIAWPLHAEQKMNATMLTEEI-GVAFRSKELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGAQKATSN 469 (498)
Q Consensus 391 ~GvP~v~~P~~~DQ~~na~~v~~~~-GvG~~~~~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~ 469 (498)
+|||||++|+++||+.||++++ +. |+|+.++. +.+++++|+++|+++|.|+++ ++||+||+++++.+++++++
T Consensus 362 ~GvP~i~~P~~~dQ~~Na~~l~-~~~g~g~~l~~----~~~~~~~l~~~i~~ll~~~~~-~~~r~~a~~l~~~~~~a~~~ 435 (456)
T 2c1x_A 362 GGVPLICRPFFGDQRLNGRMVE-DVLEIGVRIEG----GVFTKSGLMSCFDQILSQEKG-KKLRENLRALRETADRAVGP 435 (456)
T ss_dssp HTCCEEECCCSTTHHHHHHHHH-HTSCCEEECGG----GSCCHHHHHHHHHHHHHSHHH-HHHHHHHHHHHHHHHHHTST
T ss_pred hCceEEecCChhhHHHHHHHHH-HHhCeEEEecC----CCcCHHHHHHHHHHHHCCCcH-HHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999995 65 99999863 678999999999999998654 68999999999999999999
Q ss_pred CCchHHHHHHHHHHHH
Q 041419 470 SGSSYKSLSQVAKQCE 485 (498)
Q Consensus 470 ~g~~~~~~~~~~~~~~ 485 (498)
||+|+.++++|++++.
T Consensus 436 gGsS~~~l~~~v~~~~ 451 (456)
T 2c1x_A 436 KGSSTENFITLVDLVS 451 (456)
T ss_dssp TCHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHH
Confidence 9999999999999874
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.3e-60 Score=495.37 Aligned_cols=446 Identities=28% Similarity=0.522 Sum_probs=335.9
Q ss_pred CCCCCCCeEEEEcCCCccCHHHHHHHHHHHHhCC-CCEEEEEEcCCCCcccccccccC-CCCCCCeEEEecCCCCCCCCC
Q 041419 2 QSTKLKPHICLLASPGMGHLIPVVELGKRLVAHH-DVQVTVFVVASHDDASNSNVHAV-PNNNNLFNAVTLPLANISSLV 79 (498)
Q Consensus 2 ~~~~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~ 79 (498)
.+.++++||+++|+|++||++|+++||+.|++|+ ||+|||++++.+.+......++. .....+++|..++....++.
T Consensus 4 ~~~~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~- 82 (463)
T 2acv_A 4 SDINKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQ- 82 (463)
T ss_dssp HHHHHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCG-
T ss_pred ccCCCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCcc-
Confidence 3345678999999999999999999999999875 89999999997642211111111 00123899999986432211
Q ss_pred CCCCchHHHHHHHHHHhhHHHHHHHHhc-CCCCcEEEeCCCchhHHHHHHHhCCcEEEEecchHHHHHHHhhhhhhhhcc
Q 041419 80 NPDASLGEKILVLMHKSLPALRSAISAM-KFRPTALIVDFFGTEAMDVADEFGLLKYMFIASNAWFLACFIHAPAIDKKL 158 (498)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~pD~vI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 158 (498)
.........+...+....+.++++++++ ..+||+||+|.++.|+..+|+++|||++++++++++..+.+++.|.+...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~- 161 (463)
T 2acv_A 83 ELLKSPEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE- 161 (463)
T ss_dssp GGGGSHHHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT-
T ss_pred cccCCccHHHHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc-
Confidence 0001111114445566677888888873 24899999999999999999999999999999999888877776654311
Q ss_pred cccccCCCCC---cccCCCC-CCCCcccccccccCCCchhHHHHHHHhhcccCCcEEEEcCccccChHHHHhhhhccccC
Q 041419 159 LTDEHFNLEK---PMELPGC-MPVRFQDSLELFLHPNEPIFDFISSIGMKMSLSDGILVNTWDDLEPKTLGSLRDDNLLG 234 (498)
Q Consensus 159 ~~~~~~~~~~---~~~~pg~-~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~s~~~l~~~~~~~~~~~~~~~ 234 (498)
..+..... ...+||+ +++...+++..+..+...+..+ .+.....++.+++++||++++++..+..+.+..
T Consensus 162 --~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~--- 235 (463)
T 2acv_A 162 --EVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAY-YKLAERFRDTKGIIVNTFSDLEQSSIDALYDHD--- 235 (463)
T ss_dssp --CCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCTTTHHHHH-HHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHC---
T ss_pred --CCCCCccccCceeECCCCCCCCChHHCchhhcCCchHHHHH-HHHHHhcccCCEEEECCHHHHhHHHHHHHHhcc---
Confidence 11111111 3457888 7777777765554432223333 555666778889999999999999887777641
Q ss_pred CCCCCCEEEeccCCCCCCCCCCCCCCCCCcchhhHhhhcccCCCCcEEEEEccCCC-CCCHHHHHHHHHHHHhcCCcEEE
Q 041419 235 RVCKAPVYAIGPLVRSPDVASPSTKTSPSDSRVIILDWLNEQPSQSVIYVSFGSGG-TLSAKQMTELAWSLELSQQRFIW 313 (498)
Q Consensus 235 r~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i~ 313 (498)
+| .|++++|||++..... ......+..+.++.+||+.++++++|||||||+. ..+.+++.+++++|+..+.+|+|
T Consensus 236 ~p-~~~v~~vGpl~~~~~~---~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~ 311 (463)
T 2acv_A 236 EK-IPPIYAVGPLLDLKGQ---PNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLW 311 (463)
T ss_dssp TT-SCCEEECCCCCCSSCC---CBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred cc-CCcEEEeCCCcccccc---cccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEE
Confidence 23 4679999999864310 0000001345789999999888899999999998 88888899999999999999999
Q ss_pred EEcCCCCCCCCCcccccccCCCCCcccccCChhhhhhc--CCCceeecCCccHHHHhccCCcceeeecCCcchHHHHHhh
Q 041419 314 VVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRT--DKVGLVVPAWAPQAEILAHPSVGGFLSHCGWNSTVESIVN 391 (498)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~~~~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~ 391 (498)
+++.. .+.+|++|.++. ++ ++.+.+|+||.++|+|+++++|||||||||++||+++
T Consensus 312 ~~~~~---------------------~~~l~~~~~~~~~~~~-~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~ 369 (463)
T 2acv_A 312 SNSAE---------------------KKVFPEGFLEWMELEG-KGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWF 369 (463)
T ss_dssp ECCCC---------------------GGGSCTTHHHHHHHHC-SEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHT
T ss_pred EECCC---------------------cccCChhHHHhhccCC-CEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHc
Confidence 98542 124677777665 44 5666689999999999999999999999999999999
Q ss_pred CCcEEeccccccchhhHHHHhhhhcceEEe-eccCCCC--CcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhhc
Q 041419 392 GVPMIAWPLHAEQKMNATMLTEEIGVAFRS-KELPTES--LVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGAQKATS 468 (498)
Q Consensus 392 GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~-~~~~~~~--~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~~~a~~ 468 (498)
|||||++|+++||+.||+++++++|+|+.+ +.. +++ .+++++|+++|+++|++. ++||+||++++++++++++
T Consensus 370 GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~-~~~~~~~~~~~l~~ai~~ll~~~---~~~r~~a~~l~~~~~~a~~ 445 (463)
T 2acv_A 370 GVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDY-RKGSDVVAAEEIEKGLKDLMDKD---SIVHKKVQEMKEMSRNAVV 445 (463)
T ss_dssp TCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSC-CTTCCCCCHHHHHHHHHHHTCTT---CTHHHHHHHHHHHHHHHTS
T ss_pred CCCeeeccchhhhHHHHHHHHHHcCeEEEEeccc-CCCCccccHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999953699999998 210 114 689999999999999622 5699999999999999999
Q ss_pred cCCchHHHHHHHHHHHH
Q 041419 469 NSGSSYKSLSQVAKQCE 485 (498)
Q Consensus 469 ~~g~~~~~~~~~~~~~~ 485 (498)
+||+|++++++|++++.
T Consensus 446 ~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 446 DGGSSLISVGKLIDDIT 462 (463)
T ss_dssp TTSHHHHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHhc
Confidence 99999999999999873
No 6
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1.6e-43 Score=360.87 Aligned_cols=356 Identities=15% Similarity=0.191 Sum_probs=223.4
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCCC---
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVNP--- 81 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--- 81 (498)
.++|||+|+++|++||++|+++||++|++| ||+|||++++.+.+. .+.++...+...+.++..............
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~r-Gh~Vt~~t~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRAL-GHEVRYATGGDIRAV-AEAGLCAVDVSPGVNYAKLFVPDDTDVTDPMHS 97 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECSSTHHH-HTTTCEEEESSTTCCSHHHHSCCC---------
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHC-CCEEEEEeCcchhhH-HhcCCeeEecCCchhHhhhccccccccccccch
Confidence 467999999999999999999999999999 999999999875543 222222211111111111100000000000
Q ss_pred CCc----hHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEeCCCchhHHHHHHHhCCcEEEEecchHHHHHHHhhhhhhhhc
Q 041419 82 DAS----LGEKILVLMHKSLPALRSAISAMKFRPTALIVDFFGTEAMDVADEFGLLKYMFIASNAWFLACFIHAPAIDKK 157 (498)
Q Consensus 82 ~~~----~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~ 157 (498)
... ....+..........+.+.++++ +||+||+|.+.+++..+|+++|||++.+..++......... ...
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~---~~~- 171 (400)
T 4amg_A 98 EGLGEGFFAEMFARVSAVAVDGALRTARSW--RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGA---LIR- 171 (400)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHH---HHH-
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhh---HHH-
Confidence 000 11112233334455677778888 99999999999999999999999999876544321111000 000
Q ss_pred ccccccCCCCCcccCCCCCCCCcccccccccCCCchhHHHHHHHhhcccCCcEEEEcCccccChHHHHhhhhccccCCCC
Q 041419 158 LLTDEHFNLEKPMELPGCMPVRFQDSLELFLHPNEPIFDFISSIGMKMSLSDGILVNTWDDLEPKTLGSLRDDNLLGRVC 237 (498)
Q Consensus 158 ~~~~~~~~~~~~~~~pg~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~s~~~l~~~~~~~~~~~~~~~r~~ 237 (498)
..+.....+................. ......... ...
T Consensus 172 ----------------------------------~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~--- 209 (400)
T 4amg_A 172 ----------------------------------RAMSKDYERHGVTGEPTGSVRLTTTP----PSVEALLPE-DRR--- 209 (400)
T ss_dssp ----------------------------------HHTHHHHHHTTCCCCCSCEEEEECCC----HHHHHTSCG-GGC---
T ss_pred ----------------------------------HHHHHHHHHhCCCcccccchhhcccC----chhhccCcc-ccc---
Confidence 00011101111111111111111111 111110000 000
Q ss_pred CCCEEEeccCCCCCCCCCCCCCCCCCcchhhHhhhcccCCCCcEEEEEccCCCCCC--HHHHHHHHHHHHhcCCcEEEEE
Q 041419 238 KAPVYAIGPLVRSPDVASPSTKTSPSDSRVIILDWLNEQPSQSVIYVSFGSGGTLS--AKQMTELAWSLELSQQRFIWVV 315 (498)
Q Consensus 238 ~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~--~~~~~~~~~al~~~~~~~i~~~ 315 (498)
.+....+.+.... ....+.+|++..+++++|||||||+.... .+.+.+++++++..+.+++|..
T Consensus 210 ~~~~~~~~~~~~~--------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~ 275 (400)
T 4amg_A 210 SPGAWPMRYVPYN--------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTL 275 (400)
T ss_dssp CTTCEECCCCCCC--------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEEC
T ss_pred CCcccCccccccc--------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEe
Confidence 1223333332221 12344568888888999999999985443 3567889999999999999998
Q ss_pred cCCCCCCCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCccHHHHhccCCcceeeecCCcchHHHHHhhCCcE
Q 041419 316 RPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWAPQAEILAHPSVGGFLSHCGWNSTVESIVNGVPM 395 (498)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~ 395 (498)
+..... ....+|+ |+.+.+|+||.++|+|++ +||||||+||++||+++||||
T Consensus 276 ~~~~~~-----------------~~~~~~~---------~v~~~~~~p~~~lL~~~~--~~v~h~G~~s~~Eal~~GvP~ 327 (400)
T 4amg_A 276 GGGDLA-----------------LLGELPA---------NVRVVEWIPLGALLETCD--AIIHHGGSGTLLTALAAGVPQ 327 (400)
T ss_dssp CTTCCC-----------------CCCCCCT---------TEEEECCCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCE
T ss_pred cCcccc-----------------ccccCCC---------CEEEEeecCHHHHhhhhh--heeccCCccHHHHHHHhCCCE
Confidence 654321 2334555 899999999999999988 799999999999999999999
Q ss_pred EeccccccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHH
Q 041419 396 IAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGAQK 465 (498)
Q Consensus 396 v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~~~ 465 (498)
|++|+.+||+.||+++ ++.|+|+.++. .+.++ ++|+++|+| ++||+||+++++++++
T Consensus 328 v~~P~~~dQ~~na~~v-~~~G~g~~l~~----~~~~~----~al~~lL~d----~~~r~~a~~l~~~~~~ 384 (400)
T 4amg_A 328 CVIPHGSYQDTNRDVL-TGLGIGFDAEA----GSLGA----EQCRRLLDD----AGLREAALRVRQEMSE 384 (400)
T ss_dssp EECCC---CHHHHHHH-HHHTSEEECCT----TTCSH----HHHHHHHHC----HHHHHHHHHHHHHHHT
T ss_pred EEecCcccHHHHHHHH-HHCCCEEEcCC----CCchH----HHHHHHHcC----HHHHHHHHHHHHHHHc
Confidence 9999999999999999 69999999873 55555 467788888 8899999999999774
No 7
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.4e-42 Score=357.21 Aligned_cols=393 Identities=18% Similarity=0.207 Sum_probs=254.3
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCC-C--
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVN-P-- 81 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~-- 81 (498)
|++|||+|+++|++||++|+++||++|+++ ||+|+|++++.+.+.+.+. +++|..++..-...... .
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~-Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~ 79 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVAR-GHRVSYAITDEFAAQVKAA---------GATPVVYDSILPKESNPEESW 79 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHH---------TCEEEECCCCSCCTTCTTCCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHC-CCeEEEEeCHHHHHHHHhC---------CCEEEecCccccccccchhhc
Confidence 566899999999999999999999999999 9999999998765443333 56676665421111100 0
Q ss_pred CCchHHHH---HHHHHHhhHHHHHHHHhcCCCCcEEEeCCCchhHHHHHHHhCCcEEEEecchHHHHHHHhhhhhhhhcc
Q 041419 82 DASLGEKI---LVLMHKSLPALRSAISAMKFRPTALIVDFFGTEAMDVADEFGLLKYMFIASNAWFLACFIHAPAIDKKL 158 (498)
Q Consensus 82 ~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 158 (498)
..+....+ ........+.+.++++++ +||+||+|.+..++..+|+++|||++.+++++....... ..+......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~-~~~~~~~~~ 156 (424)
T 2iya_A 80 PEDQESAMGLFLDEAVRVLPQLEDAYADD--RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFE-EDVPAVQDP 156 (424)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHTTTS--CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHH-HHSGGGSCC
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccc-ccccccccc
Confidence 11222222 222233444555666655 999999999888899999999999999987654211110 000000000
Q ss_pred cccccCCCCCcccCC-CCCC-CCc-ccccccccCCCchhHHHHHHHh------hcccCCcEEEEcCccccChHHHHhhhh
Q 041419 159 LTDEHFNLEKPMELP-GCMP-VRF-QDSLELFLHPNEPIFDFISSIG------MKMSLSDGILVNTWDDLEPKTLGSLRD 229 (498)
Q Consensus 159 ~~~~~~~~~~~~~~p-g~~~-l~~-~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~lv~s~~~l~~~~~~~~~~ 229 (498)
..........| +... ... ...+. .......+..+..+.+ ......+.+++++.+++++.. .
T Consensus 157 ----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~-----~ 226 (424)
T 2iya_A 157 ----TADRGEEAAAPAGTGDAEEGAEAEDG-LVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG-----D 226 (424)
T ss_dssp ----CC---------------------HHH-HHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG-----G
T ss_pred ----ccccccccccccccccchhhhccchh-HHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc-----c
Confidence 00000000000 0000 000 00000 0000000111101100 001135667888888777641 0
Q ss_pred ccccCCCCCCCEEEeccCCCCCCCCCCCCCCCCCcchhhHhhhcccCCCCcEEEEEccCCCCCCHHHHHHHHHHHHhcCC
Q 041419 230 DNLLGRVCKAPVYAIGPLVRSPDVASPSTKTSPSDSRVIILDWLNEQPSQSVIYVSFGSGGTLSAKQMTELAWSLELSQQ 309 (498)
Q Consensus 230 ~~~~~r~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~ 309 (498)
...+++++|||+..... +..+|++..+++++|||++||+.....+.+.+++++++..+.
T Consensus 227 ------~~~~~~~~vGp~~~~~~---------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~ 285 (424)
T 2iya_A 227 ------TVGDNYTFVGPTYGDRS---------------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDW 285 (424)
T ss_dssp ------GCCTTEEECCCCCCCCG---------------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSS
T ss_pred ------CCCCCEEEeCCCCCCcc---------------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCc
Confidence 10235999999864321 234687766677899999999986667788899999998888
Q ss_pred cEEEEEcCCCCCCCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCccHHHHhccCCcceeeecCCcchHHHHH
Q 041419 310 RFIWVVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWAPQAEILAHPSVGGFLSHCGWNSTVESI 389 (498)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal 389 (498)
+++|.++..... . ....+|+ |+.+.+|+||.++|++++ +||||||+||++||+
T Consensus 286 ~~~~~~g~~~~~--------------~--~~~~~~~---------~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~ 338 (424)
T 2iya_A 286 HVVLSVGRFVDP--------------A--DLGEVPP---------NVEVHQWVPQLDILTKAS--AFITHAGMGSTMEAL 338 (424)
T ss_dssp EEEEECCTTSCG--------------G--GGCSCCT---------TEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHH
T ss_pred EEEEEECCcCCh--------------H--HhccCCC---------CeEEecCCCHHHHHhhCC--EEEECCchhHHHHHH
Confidence 999988643110 0 0112232 789999999999999999 799999999999999
Q ss_pred hhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhhcc
Q 041419 390 VNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGAQKATSN 469 (498)
Q Consensus 390 ~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~ 469 (498)
++|||+|++|...||+.||+++ ++.|+|+.++. ..++.++|+++|+++|+| ++++++++++++.+..
T Consensus 339 ~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~----~~~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~~~---- 405 (424)
T 2iya_A 339 SNAVPMVAVPQIAEQTMNAERI-VELGLGRHIPR----DQVTAEKLREAVLAVASD----PGVAERLAAVRQEIRE---- 405 (424)
T ss_dssp HTTCCEEECCCSHHHHHHHHHH-HHTTSEEECCG----GGCCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHT----
T ss_pred HcCCCEEEecCccchHHHHHHH-HHCCCEEEcCc----CCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHh----
Confidence 9999999999999999999999 58999999863 568999999999999998 7799999999998653
Q ss_pred CCchHHHHHHHH
Q 041419 470 SGSSYKSLSQVA 481 (498)
Q Consensus 470 ~g~~~~~~~~~~ 481 (498)
.++..+.++.+.
T Consensus 406 ~~~~~~~~~~i~ 417 (424)
T 2iya_A 406 AGGARAAADILE 417 (424)
T ss_dssp SCHHHHHHHHHH
T ss_pred cCcHHHHHHHHH
Confidence 344444444443
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3.8e-40 Score=338.04 Aligned_cols=363 Identities=12% Similarity=0.081 Sum_probs=235.1
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCCC-CCchH
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVNP-DASLG 86 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~ 86 (498)
|||+|++.|+.||++|+++||++|+++ ||+|+|++++.+.+.+.+. +++|+.++....+.+ .. .....
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~-Gh~V~~~~~~~~~~~v~~~---------g~~~~~i~~~~~~~~-~~~~~~~~ 69 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDL-GADVRMCAPPDCAERLAEV---------GVPHVPVGPSARAPI-QRAKPLTA 69 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHT---------TCCEEECCC--------CCSCCCH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHC-CCeEEEEcCHHHHHHHHHc---------CCeeeeCCCCHHHHh-hcccccch
Confidence 799999999999999999999999999 9999999998754333222 666766664321111 11 01111
Q ss_pred HHHHHHHHHh-hHHHHHHHHhcCCCCcEEEeCC-Cchh--HHHHHHHhCCcEEEEecchHHHHHHHhhhhhhhhcccccc
Q 041419 87 EKILVLMHKS-LPALRSAISAMKFRPTALIVDF-FGTE--AMDVADEFGLLKYMFIASNAWFLACFIHAPAIDKKLLTDE 162 (498)
Q Consensus 87 ~~~~~~~~~~-~~~l~~~l~~~~~~pD~vI~D~-~~~~--a~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 162 (498)
..+..++... ...++++.+. ..+||+||+|. +..+ +..+|+++|||++.++.++.+....+ .|. .
T Consensus 70 ~~~~~~~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~--~p~--------~ 138 (415)
T 1iir_A 70 EDVRRFTTEAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSPY--YPP--------P 138 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSS--SCC--------C
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCcc--cCC--------c
Confidence 1222222211 2233444431 34999999997 6777 88999999999999887664321000 000 0
Q ss_pred cCCCCCcccCCCCCCCCcccccccccCC--CchhHHHHHHHhhc--cc----------CCcEEEEcCccccChHHHHhhh
Q 041419 163 HFNLEKPMELPGCMPVRFQDSLELFLHP--NEPIFDFISSIGMK--MS----------LSDGILVNTWDDLEPKTLGSLR 228 (498)
Q Consensus 163 ~~~~~~~~~~pg~~~l~~~~l~~~~~~~--~~~~~~~~~~~~~~--~~----------~~~~~lv~s~~~l~~~~~~~~~ 228 (498)
.. ++.+|+ ......+...+... ...+...+.+.... .. .. .+++++.+++++.
T Consensus 139 ~~----~~~~~~--~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~------ 205 (415)
T 1iir_A 139 PL----GEPSTQ--DTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPL------ 205 (415)
T ss_dssp C---------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCC------
T ss_pred cC----Cccccc--hHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCC------
Confidence 00 000100 00000000000000 00000000001000 00 11 3566666665541
Q ss_pred hccccCCCCCCCEEEeccCCCCCCCCCCCCCCCCCcchhhHhhhcccCCCCcEEEEEccCCCCCCHHHHHHHHHHHHhcC
Q 041419 229 DDNLLGRVCKAPVYAIGPLVRSPDVASPSTKTSPSDSRVIILDWLNEQPSQSVIYVSFGSGGTLSAKQMTELAWSLELSQ 308 (498)
Q Consensus 229 ~~~~~~r~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~ 308 (498)
+++.+ ++++|||+...+. ...+.++.+|++++ +++|||++||+. ...+....+++++++.+
T Consensus 206 -----~~~~~-~~~~vG~~~~~~~----------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~ 266 (415)
T 1iir_A 206 -----QPTDL-DAVQTGAWILPDE----------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHG 266 (415)
T ss_dssp -----CCCSS-CCEECCCCCCCCC----------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTT
T ss_pred -----CcccC-CeEeeCCCccCcc----------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCC
Confidence 13323 7899999986532 24567899999765 368999999987 56677788999999999
Q ss_pred CcEEEEEcCCCCCCCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCccHHHHhccCCcceeeecCCcchHHHH
Q 041419 309 QRFIWVVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWAPQAEILAHPSVGGFLSHCGWNSTVES 388 (498)
Q Consensus 309 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ItHgG~gs~~ea 388 (498)
.+++|+++.... ....+|+ |+.+.+|+||.++|++++ +||||||+||++||
T Consensus 267 ~~~v~~~g~~~~------------------~~~~~~~---------~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea 317 (415)
T 1iir_A 267 RRVILSRGWADL------------------VLPDDGA---------DCFAIGEVNHQVLFGRVA--AVIHHGGAGTTHVA 317 (415)
T ss_dssp CCEEECTTCTTC------------------CCSSCGG---------GEEECSSCCHHHHGGGSS--EEEECCCHHHHHHH
T ss_pred CeEEEEeCCCcc------------------cccCCCC---------CEEEeCcCChHHHHhhCC--EEEeCCChhHHHHH
Confidence 999998764311 0112222 789999999999997777 89999999999999
Q ss_pred HhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH
Q 041419 389 IVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGA 463 (498)
Q Consensus 389 l~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~ 463 (498)
+++|||+|++|...||+.||+++ ++.|+|+.++. .+++.++|+++|+++ .| ++++++++++++++
T Consensus 318 ~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~----~~~~~~~l~~~i~~l-~~----~~~~~~~~~~~~~~ 382 (415)
T 1iir_A 318 ARAGAPQILLPQMADQPYYAGRV-AELGVGVAHDG----PIPTFDSLSAALATA-LT----PETHARATAVAGTI 382 (415)
T ss_dssp HHHTCCEEECCCSTTHHHHHHHH-HHHTSEEECSS----SSCCHHHHHHHHHHH-TS----HHHHHHHHHHHHHS
T ss_pred HHcCCCEEECCCCCccHHHHHHH-HHCCCcccCCc----CCCCHHHHHHHHHHH-cC----HHHHHHHHHHHHHH
Confidence 99999999999999999999999 69999999863 568999999999999 88 78999999998884
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=9.2e-40 Score=335.30 Aligned_cols=359 Identities=13% Similarity=0.075 Sum_probs=238.4
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCCC--CCch
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVNP--DASL 85 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~ 85 (498)
|||++++.++.||++|+++||++|+++ ||+|+|++++.+.+.+.+. +++|..++.... +.... ....
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~-Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~-~~~~~~~~~~~ 69 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKAL-GVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQH-MMLQEGMPPPP 69 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHH---------TCCEEECSCCGG-GCCCTTSCCCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHC-CCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHH-HHHhhccccch
Confidence 799999999999999999999999999 9999999998654433332 566666664311 11011 0111
Q ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCcEEEeCC-Cchh--HHHHHHHhCCcEEEEecchHHHHHHHhhhhhhhhcccccc
Q 041419 86 GEKILVLMHKSLPALRSAISAMKFRPTALIVDF-FGTE--AMDVADEFGLLKYMFIASNAWFLACFIHAPAIDKKLLTDE 162 (498)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~-~~~~--a~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 162 (498)
...+..++......+.+.+.+...+||+||+|. +.++ +..+|+++|||++.++.++.+.... .. + .
T Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~---------~~-p-~ 138 (416)
T 1rrv_A 70 PEEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASP---------HL-P-P 138 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCS---------SS-C-C
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCCc---------cc-C-C
Confidence 112222222222222222221134899999996 4566 7889999999999888665421100 00 0 0
Q ss_pred cCCCCCcccC-CCCCCCCcccccccccCC--C----chhHHHHHHHhh------------cccCCcEEEEcCccccChHH
Q 041419 163 HFNLEKPMEL-PGCMPVRFQDSLELFLHP--N----EPIFDFISSIGM------------KMSLSDGILVNTWDDLEPKT 223 (498)
Q Consensus 163 ~~~~~~~~~~-pg~~~l~~~~l~~~~~~~--~----~~~~~~~~~~~~------------~~~~~~~~lv~s~~~l~~~~ 223 (498)
.. .+.. ++. +...+... . ..+.....+... ..... .+++++.+++++.
T Consensus 139 ~~----~~~~~~~r-------~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~- 205 (416)
T 1rrv_A 139 AY----DEPTTPGV-------TDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL- 205 (416)
T ss_dssp CB----CSCCCTTC-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC-
T ss_pred CC----CCCCCchH-------HHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC-
Confidence 00 0001 110 01100000 0 000000001000 01112 4666766666543
Q ss_pred HHhhhhccccCCCCCCCEEEeccCCCCCCCCCCCCCCCCCcchhhHhhhcccCCCCcEEEEEccCCCC-CCHHHHHHHHH
Q 041419 224 LGSLRDDNLLGRVCKAPVYAIGPLVRSPDVASPSTKTSPSDSRVIILDWLNEQPSQSVIYVSFGSGGT-LSAKQMTELAW 302 (498)
Q Consensus 224 ~~~~~~~~~~~r~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~-~~~~~~~~~~~ 302 (498)
++.+ ++++|||+..+.. ...+.++.+|++++ +++|||++||+.. ...+.+.++++
T Consensus 206 -----------~~~~-~~~~vG~~~~~~~----------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~ 261 (416)
T 1rrv_A 206 -----------QPDV-DAVQTGAWLLSDE----------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVE 261 (416)
T ss_dssp -----------CSSC-CCEECCCCCCCCC----------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHH
T ss_pred -----------CCCC-CeeeECCCccCcc----------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHH
Confidence 2223 7899999987533 24567899999765 3689999999854 34456778999
Q ss_pred HHHhcCCcEEEEEcCCCCCCCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCccHHHHhccCCcceeeecCCc
Q 041419 303 SLELSQQRFIWVVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWAPQAEILAHPSVGGFLSHCGW 382 (498)
Q Consensus 303 al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ItHgG~ 382 (498)
+++..+.+++|+++.... ....+|+ |+.+.+|+||.++|++++ +||||||+
T Consensus 262 al~~~~~~~v~~~g~~~~------------------~~~~~~~---------~v~~~~~~~~~~ll~~~d--~~v~~~G~ 312 (416)
T 1rrv_A 262 AIRAQGRRVILSRGWTEL------------------VLPDDRD---------DCFAIDEVNFQALFRRVA--AVIHHGSA 312 (416)
T ss_dssp HHHHTTCCEEEECTTTTC------------------CCSCCCT---------TEEEESSCCHHHHGGGSS--EEEECCCH
T ss_pred HHHHCCCeEEEEeCCccc------------------cccCCCC---------CEEEeccCChHHHhccCC--EEEecCCh
Confidence 999999999999864311 0112232 788899999999998887 89999999
Q ss_pred chHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH
Q 041419 383 NSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYG 462 (498)
Q Consensus 383 gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~ 462 (498)
||++||+++|||+|++|+..||+.||+++ ++.|+|+.++. ...+.++|+++|+++ .| +++++++++++++
T Consensus 313 ~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~----~~~~~~~l~~~i~~l-~~----~~~~~~~~~~~~~ 382 (416)
T 1rrv_A 313 GTEHVATRAGVPQLVIPRNTDQPYFAGRV-AALGIGVAHDG----PTPTFESLSAALTTV-LA----PETRARAEAVAGM 382 (416)
T ss_dssp HHHHHHHHHTCCEEECCCSBTHHHHHHHH-HHHTSEEECSS----SCCCHHHHHHHHHHH-TS----HHHHHHHHHHTTT
T ss_pred hHHHHHHHcCCCEEEccCCCCcHHHHHHH-HHCCCccCCCC----CCCCHHHHHHHHHHh-hC----HHHHHHHHHHHHH
Confidence 99999999999999999999999999999 68999998863 568999999999999 88 7899999998887
Q ss_pred HH
Q 041419 463 AQ 464 (498)
Q Consensus 463 ~~ 464 (498)
+.
T Consensus 383 ~~ 384 (416)
T 1rrv_A 383 VL 384 (416)
T ss_dssp CC
T ss_pred Hh
Confidence 43
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=2.9e-38 Score=322.90 Aligned_cols=360 Identities=13% Similarity=0.085 Sum_probs=236.1
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCC--CCC-CCCCCc
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANI--SSL-VNPDAS 84 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~-~~~~~~ 84 (498)
|||+|++.++.||++|++.||++|+++ ||+|+|++++.+.+.+.+. ++.|..++.... ... ......
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~-Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~~~~~~~~~~~~ 70 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLREL-GADARMCLPPDYVERCAEV---------GVPMVPVGRAVRAGAREPGELPPG 70 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHT-TCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSGGGSCTTCCCTT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHC-CCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHHHhccccCCHHH
Confidence 789999999999999999999999999 9999999998765554434 555555543211 000 011112
Q ss_pred hHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEeCCCchhH---HHHHHHhCCcEEEEecchHHHHHHHhhh-hhhhhcccc
Q 041419 85 LGEKILVLMHKSLPALRSAISAMKFRPTALIVDFFGTEA---MDVADEFGLLKYMFIASNAWFLACFIHA-PAIDKKLLT 160 (498)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~a---~~~A~~lgiP~v~~~~~~~~~~~~~~~~-p~~~~~~~~ 160 (498)
....+..........+.+++ .+||+||+|.....+ ..+|+++|||++.+..++....+..++. .......
T Consensus 71 ~~~~~~~~~~~~~~~l~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~~-- 144 (404)
T 3h4t_A 71 AAEVVTEVVAEWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQG-- 144 (404)
T ss_dssp CGGGHHHHHHHHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHHH--
Confidence 22222233333333333332 379999998654444 6899999999998887765321110000 0000000
Q ss_pred cccCCCCCcccCCCCCCCCcccccccccCCCchhHHHHHHHhhc--ccC---------CcEEEEcCccccChHHHHhhhh
Q 041419 161 DEHFNLEKPMELPGCMPVRFQDSLELFLHPNEPIFDFISSIGMK--MSL---------SDGILVNTWDDLEPKTLGSLRD 229 (498)
Q Consensus 161 ~~~~~~~~~~~~pg~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~---------~~~~lv~s~~~l~~~~~~~~~~ 229 (498)
. ...+.....+.... +.. .+..+.+..+.+.
T Consensus 145 ---------------------------~--~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~--------- 186 (404)
T 3h4t_A 145 ---------------------------A--DRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLS--------- 186 (404)
T ss_dssp ---------------------------H--HHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTS---------
T ss_pred ---------------------------H--HHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCccee---------
Confidence 0 00000000000000 000 0011222222222
Q ss_pred ccccCCCCCC-CEEEeccCCCCCCCCCCCCCCCCCcchhhHhhhcccCCCCcEEEEEccCCCCCCHHHHHHHHHHHHhcC
Q 041419 230 DNLLGRVCKA-PVYAIGPLVRSPDVASPSTKTSPSDSRVIILDWLNEQPSQSVIYVSFGSGGTLSAKQMTELAWSLELSQ 308 (498)
Q Consensus 230 ~~~~~r~~~p-~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~ 308 (498)
+++.++ +++++|++..... ..+++++.+|++.. +++|||++||+.. ..+.+..+++++++.+
T Consensus 187 ----p~~~~~~~~~~~G~~~~~~~----------~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~ 249 (404)
T 3h4t_A 187 ----PLRPTDLGTVQTGAWILPDQ----------RPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQG 249 (404)
T ss_dssp ----CCCTTCCSCCBCCCCCCCCC----------CCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTT
T ss_pred ----CCCCCCCCeEEeCccccCCC----------CCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCC
Confidence 122133 4888998876543 35678899999753 5689999999976 6677888999999999
Q ss_pred CcEEEEEcCCCCCCCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCccHHHHhccCCcceeeecCCcchHHHH
Q 041419 309 QRFIWVVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWAPQAEILAHPSVGGFLSHCGWNSTVES 388 (498)
Q Consensus 309 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ItHgG~gs~~ea 388 (498)
.+++|+.+.... ....++ +|+.+.+|+||.++|++++ ++|||||+||+.||
T Consensus 250 ~~vv~~~g~~~~------------------~~~~~~---------~~v~~~~~~~~~~ll~~~d--~~v~~gG~~t~~Ea 300 (404)
T 3h4t_A 250 RRVVLSSGWAGL------------------GRIDEG---------DDCLVVGEVNHQVLFGRVA--AVVHHGGAGTTTAV 300 (404)
T ss_dssp CCEEEECTTTTC------------------CCSSCC---------TTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHH
T ss_pred CEEEEEeCCccc------------------ccccCC---------CCEEEecCCCHHHHHhhCc--EEEECCcHHHHHHH
Confidence 999998865321 001122 3799999999999999888 89999999999999
Q ss_pred HhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhhc
Q 041419 389 IVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGAQKATS 468 (498)
Q Consensus 389 l~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~~~a~~ 468 (498)
+++|+|+|++|+.+||+.||+++ ++.|+|+.++. .+++.++|.++|+++++ ++|+++++++++. +.
T Consensus 301 l~~GvP~v~~p~~~dQ~~na~~~-~~~G~g~~l~~----~~~~~~~l~~ai~~ll~-----~~~~~~~~~~~~~----~~ 366 (404)
T 3h4t_A 301 TRAGAPQVVVPQKADQPYYAGRV-ADLGVGVAHDG----PTPTVESLSAALATALT-----PGIRARAAAVAGT----IR 366 (404)
T ss_dssp HHHTCCEEECCCSTTHHHHHHHH-HHHTSEEECSS----SSCCHHHHHHHHHHHTS-----HHHHHHHHHHHTT----CC
T ss_pred HHcCCCEEEcCCcccHHHHHHHH-HHCCCEeccCc----CCCCHHHHHHHHHHHhC-----HHHHHHHHHHHHH----Hh
Confidence 99999999999999999999999 69999999863 67899999999999997 4589999998887 44
Q ss_pred cCCchHHHHHHHHH
Q 041419 469 NSGSSYKSLSQVAK 482 (498)
Q Consensus 469 ~~g~~~~~~~~~~~ 482 (498)
+ .+..+.++.+.+
T Consensus 367 ~-~~~~~~~~~i~~ 379 (404)
T 3h4t_A 367 T-DGTTVAAKLLLE 379 (404)
T ss_dssp C-CHHHHHHHHHHH
T ss_pred h-hHHHHHHHHHHH
Confidence 4 444444444433
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.9e-37 Score=317.75 Aligned_cols=378 Identities=13% Similarity=0.129 Sum_probs=247.4
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCC-----C
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSL-----V 79 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-----~ 79 (498)
..+|||+|+++++.||++|++.||++|+++ ||+|+|++++.+.+.+.+. ++.+..++....... +
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~-Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~ 87 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRR-GHRVSYVTAGGFAEPVRAA---------GATVVPYQSEIIDADAAEVFG 87 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGGGHHHHHHT---------TCEEEECCCSTTTCCHHHHHH
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHC-CCEEEEEeCHHHHHHHHhc---------CCEEEeccccccccccchhhc
Confidence 456899999999999999999999999999 9999999988755544333 677776653211100 0
Q ss_pred C-CCCchHHH-HHHHHHHhhHHHHHHHHhcCCCCcEEEeC-CCchhHHHHHHHhCCcEEEEecchHHHHHHHhhhhhhhh
Q 041419 80 N-PDASLGEK-ILVLMHKSLPALRSAISAMKFRPTALIVD-FFGTEAMDVADEFGLLKYMFIASNAWFLACFIHAPAIDK 156 (498)
Q Consensus 80 ~-~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~pD~vI~D-~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 156 (498)
. ........ +..........+.+.++++ +||+||+| +..+++..+|+++|||++.+.+........ ...+....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~-~~~~~~~~ 164 (415)
T 3rsc_A 88 SDDLGVRPHLMYLRENVSVLRATAEALDGD--VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHY-SFSQDMVT 164 (415)
T ss_dssp SSSSCHHHHHHHHHHHHHHHHHHHHHHSSS--CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSC-CHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcc-cccccccc
Confidence 0 00011111 2222333445666667777 99999999 888888899999999999876433210000 00000000
Q ss_pred cccccccCCCCCcccCCCCCCCCcccccccccCCCchhHHHHHHHhh------ccc-CCcEEEEcCccccChHHHHhhhh
Q 041419 157 KLLTDEHFNLEKPMELPGCMPVRFQDSLELFLHPNEPIFDFISSIGM------KMS-LSDGILVNTWDDLEPKTLGSLRD 229 (498)
Q Consensus 157 ~~~~~~~~~~~~~~~~pg~~~l~~~~l~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~lv~s~~~l~~~~~~~~~~ 229 (498)
.. .+..+. ........+..+..+... ... ..+..+....+.++..
T Consensus 165 ~~-------------~~~~p~--------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~------- 216 (415)
T 3rsc_A 165 LA-------------GTIDPL--------DLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA------- 216 (415)
T ss_dssp HH-------------TCCCGG--------GCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT-------
T ss_pred cc-------------ccCChh--------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC-------
Confidence 00 000000 000000001111000000 000 1144444443333322
Q ss_pred ccccCCCCCC-CEEEeccCCCCCCCCCCCCCCCCCcchhhHhhhcccCCCCcEEEEEccCCCCCCHHHHHHHHHHHHhcC
Q 041419 230 DNLLGRVCKA-PVYAIGPLVRSPDVASPSTKTSPSDSRVIILDWLNEQPSQSVIYVSFGSGGTLSAKQMTELAWSLELSQ 308 (498)
Q Consensus 230 ~~~~~r~~~p-~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~ 308 (498)
+..++ +++++||+..... +..+|....+++++|||++||......+.+..++++++..+
T Consensus 217 -----~~~~~~~~~~vGp~~~~~~---------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~ 276 (415)
T 3rsc_A 217 -----GDTFDDRFVFVGPCFDDRR---------------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQP 276 (415)
T ss_dssp -----GGGCCTTEEECCCCCCCCG---------------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSS
T ss_pred -----cccCCCceEEeCCCCCCcc---------------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCC
Confidence 11133 3899999875432 23456655567789999999997667778889999999888
Q ss_pred CcEEEEEcCCCCCCCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCccHHHHhccCCcceeeecCCcchHHHH
Q 041419 309 QRFIWVVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWAPQAEILAHPSVGGFLSHCGWNSTVES 388 (498)
Q Consensus 309 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ItHgG~gs~~ea 388 (498)
.+++|.++..... . ....+|+ |+.+.+|+|+.++|++++ ++|||||+||++||
T Consensus 277 ~~~v~~~g~~~~~--------------~--~l~~~~~---------~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea 329 (415)
T 3rsc_A 277 WHVVMTLGGQVDP--------------A--ALGDLPP---------NVEAHRWVPHVKVLEQAT--VCVTHGGMGTLMEA 329 (415)
T ss_dssp CEEEEECTTTSCG--------------G--GGCCCCT---------TEEEESCCCHHHHHHHEE--EEEESCCHHHHHHH
T ss_pred cEEEEEeCCCCCh--------------H--HhcCCCC---------cEEEEecCCHHHHHhhCC--EEEECCcHHHHHHH
Confidence 8999988643110 0 1122233 799999999999999998 79999999999999
Q ss_pred HhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhhc
Q 041419 389 IVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGAQKATS 468 (498)
Q Consensus 389 l~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~~~a~~ 468 (498)
+++|+|+|++|...||+.||+++ ++.|+|+.++. ++++.++|+++|+++|.| ++++++++++++.+..
T Consensus 330 ~~~G~P~v~~p~~~~q~~~a~~l-~~~g~g~~~~~----~~~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~~~--- 397 (415)
T 3rsc_A 330 LYWGRPLVVVPQSFDVQPMARRV-DQLGLGAVLPG----EKADGDTLLAAVGAVAAD----PALLARVEAMRGHVRR--- 397 (415)
T ss_dssp HHTTCCEEECCCSGGGHHHHHHH-HHHTCEEECCG----GGCCHHHHHHHHHHHHTC----HHHHHHHHHHHHHHHH---
T ss_pred HHhCCCEEEeCCcchHHHHHHHH-HHcCCEEEccc----CCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHh---
Confidence 99999999999999999999999 58999999873 678999999999999999 7889999999888553
Q ss_pred cCCchHHHHHHHHHH
Q 041419 469 NSGSSYKSLSQVAKQ 483 (498)
Q Consensus 469 ~~g~~~~~~~~~~~~ 483 (498)
.++..+.++.+.+.
T Consensus 398 -~~~~~~~~~~i~~~ 411 (415)
T 3rsc_A 398 -AGGAARAADAVEAY 411 (415)
T ss_dssp -SCHHHHHHHHHHHH
T ss_pred -cCHHHHHHHHHHHH
Confidence 45555555544443
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=2.8e-37 Score=314.75 Aligned_cols=379 Identities=17% Similarity=0.169 Sum_probs=245.0
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCC--CCCC-CC
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANI--SSLV-NP 81 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~-~~ 81 (498)
|+++||+|++.++.||++|++.||++|+++ ||+|+|++++.+.+.+.+. ++++..++.... .... ..
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~ 71 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARR-GHRITYVTTPLFADEVKAA---------GAEVVLYKSEFDTFHVPEVVK 71 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECHHHHHHHHHT---------TCEEEECCCGGGTSSSSSSSC
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhC-CCEEEEEcCHHHHHHHHHc---------CCEEEeccccccccccccccc
Confidence 445699999999999999999999999999 9999999987655443333 566666653211 1100 01
Q ss_pred CCchHHH----HHHHHHHhhHHHHHHHHhcCCCCcEEEeC-CCchhHHHHHHHhCCcEEEEecchHHHHHHHhhhhhhhh
Q 041419 82 DASLGEK----ILVLMHKSLPALRSAISAMKFRPTALIVD-FFGTEAMDVADEFGLLKYMFIASNAWFLACFIHAPAIDK 156 (498)
Q Consensus 82 ~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~pD~vI~D-~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 156 (498)
..+.... +........+.+.+.++++ +||+||+| +...++..+|+++|||++.+.++....... ...+....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~-~~~~~~~~ 148 (402)
T 3ia7_A 72 QEDAETQLHLVYVRENVAILRAAEEALGDN--PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHY-SLFKELWK 148 (402)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHTTC--CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTB-CHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccc-cccccccc
Confidence 1122222 2222233445666667676 99999999 778888899999999999876432210000 00000000
Q ss_pred cccccccCCCCCcccCCCCCCCCcccccccccCCCchhHHHHHHHh------hcccC-CcEEEEcCccccChHHHHhhhh
Q 041419 157 KLLTDEHFNLEKPMELPGCMPVRFQDSLELFLHPNEPIFDFISSIG------MKMSL-SDGILVNTWDDLEPKTLGSLRD 229 (498)
Q Consensus 157 ~~~~~~~~~~~~~~~~pg~~~l~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~lv~s~~~l~~~~~~~~~~ 229 (498)
.. ....+- .... + ...+..+..+.. ..... .+..+.....+++..
T Consensus 149 ~~--------------~~~~~~---~~~~-~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~------- 200 (402)
T 3ia7_A 149 SN--------------GQRHPA---DVEA-V---HSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF------- 200 (402)
T ss_dssp HH--------------TCCCGG---GSHH-H---HHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-------
T ss_pred cc--------------cccChh---hHHH-H---HHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-------
Confidence 00 000000 0000 0 000000100000 00001 133444433333322
Q ss_pred ccccCCCCCC-CEEEeccCCCCCCCCCCCCCCCCCcchhhHhhhcccCCCCcEEEEEccCCCCCCHHHHHHHHHHHHhcC
Q 041419 230 DNLLGRVCKA-PVYAIGPLVRSPDVASPSTKTSPSDSRVIILDWLNEQPSQSVIYVSFGSGGTLSAKQMTELAWSLELSQ 308 (498)
Q Consensus 230 ~~~~~r~~~p-~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~ 308 (498)
+..++ +++++||+..... +..+|+...+++++|||++||......+.+..++++++..+
T Consensus 201 -----~~~~~~~~~~vGp~~~~~~---------------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~ 260 (402)
T 3ia7_A 201 -----AETFDERFAFVGPTLTGRD---------------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTP 260 (402)
T ss_dssp -----GGGCCTTEEECCCCCCC-------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSS
T ss_pred -----cccCCCCeEEeCCCCCCcc---------------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCC
Confidence 11123 4999999875432 23346654566789999999997777778889999999888
Q ss_pred CcEEEEEcCCCCCCCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCccHHHHhccCCcceeeecCCcchHHHH
Q 041419 309 QRFIWVVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWAPQAEILAHPSVGGFLSHCGWNSTVES 388 (498)
Q Consensus 309 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ItHgG~gs~~ea 388 (498)
.+++|.++..... . ....++ +|+.+.+|+|+.++|++++ ++|||||+||+.||
T Consensus 261 ~~~~~~~g~~~~~--------------~--~~~~~~---------~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea 313 (402)
T 3ia7_A 261 WHVVMAIGGFLDP--------------A--VLGPLP---------PNVEAHQWIPFHSVLAHAR--ACLTHGTTGAVLEA 313 (402)
T ss_dssp CEEEEECCTTSCG--------------G--GGCSCC---------TTEEEESCCCHHHHHTTEE--EEEECCCHHHHHHH
T ss_pred cEEEEEeCCcCCh--------------h--hhCCCC---------CcEEEecCCCHHHHHhhCC--EEEECCCHHHHHHH
Confidence 8888887643110 0 111222 2799999999999999999 79999999999999
Q ss_pred HhhCCcEEeccc-cccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhh
Q 041419 389 IVNGVPMIAWPL-HAEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGAQKAT 467 (498)
Q Consensus 389 l~~GvP~v~~P~-~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~~~a~ 467 (498)
+++|+|+|++|. ..||+.||+++ ++.|+|..+.. ++++.++|.++|+++|+| ++++++++++++.+.
T Consensus 314 ~~~G~P~v~~p~~~~~q~~~a~~~-~~~g~g~~~~~----~~~~~~~l~~~~~~ll~~----~~~~~~~~~~~~~~~--- 381 (402)
T 3ia7_A 314 FAAGVPLVLVPHFATEAAPSAERV-IELGLGSVLRP----DQLEPASIREAVERLAAD----SAVRERVRRMQRDIL--- 381 (402)
T ss_dssp HHTTCCEEECGGGCGGGHHHHHHH-HHTTSEEECCG----GGCSHHHHHHHHHHHHHC----HHHHHHHHHHHHHHH---
T ss_pred HHhCCCEEEeCCCcccHHHHHHHH-HHcCCEEEccC----CCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHh---
Confidence 999999999999 99999999999 58999999873 678999999999999999 778999999888854
Q ss_pred ccCCchHHHHHHHHHHH
Q 041419 468 SNSGSSYKSLSQVAKQC 484 (498)
Q Consensus 468 ~~~g~~~~~~~~~~~~~ 484 (498)
+.++..+.++.+.+.+
T Consensus 382 -~~~~~~~~~~~i~~~~ 397 (402)
T 3ia7_A 382 -SSGGPARAADEVEAYL 397 (402)
T ss_dssp -TSCHHHHHHHHHHHHH
T ss_pred -hCChHHHHHHHHHHHH
Confidence 3455555555554443
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.9e-36 Score=312.97 Aligned_cols=359 Identities=13% Similarity=0.121 Sum_probs=225.8
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCC-CCC-----
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANI-SSL----- 78 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~----- 78 (498)
...|||+|++.|+.||++|+++||++|+++ ||+|+|++++.+.+.+.+. +++|..++.... .++
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~-GheV~~~~~~~~~~~v~~~---------G~~~~~i~~~~~~~~~~~~~~ 87 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAA-GHEVRVVASPALTEDITAA---------GLTAVPVGTDVDLVDFMTHAG 87 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHT-TCEEEEEECGGGHHHHHTT---------TCCEEECSCCCCHHHHHHHTT
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHC-CCeEEEEeCchhHHHHHhC---------CCceeecCCccchHHHhhhhh
Confidence 445899999999999999999999999999 9999999988754433222 667777664310 000
Q ss_pred ---------CC-----CCCchHHHH---HHHH----H-----H-hhHHHHHHHHhcCCCCcEEEeCCCchhHHHHHHHhC
Q 041419 79 ---------VN-----PDASLGEKI---LVLM----H-----K-SLPALRSAISAMKFRPTALIVDFFGTEAMDVADEFG 131 (498)
Q Consensus 79 ---------~~-----~~~~~~~~~---~~~~----~-----~-~~~~l~~~l~~~~~~pD~vI~D~~~~~a~~~A~~lg 131 (498)
.. ........+ .... . . ....+.++++++ +||+||+|....++..+|+.+|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~aA~~lg 165 (441)
T 2yjn_A 88 HDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW--RPDLVIWEPLTFAAPIAAAVTG 165 (441)
T ss_dssp HHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHHT
T ss_pred cccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc--CCCEEEecCcchhHHHHHHHcC
Confidence 00 000000111 1111 1 1 445566667777 9999999998788889999999
Q ss_pred CcEEEEecchHHHHHHHhhhhhhhhcccccccCCCCCcccCCCCCCCCcccccccccCC-CchhHHHHHHHhh-cc----
Q 041419 132 LLKYMFIASNAWFLACFIHAPAIDKKLLTDEHFNLEKPMELPGCMPVRFQDSLELFLHP-NEPIFDFISSIGM-KM---- 205 (498)
Q Consensus 132 iP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~pg~~~l~~~~l~~~~~~~-~~~~~~~~~~~~~-~~---- 205 (498)
||++.+...+..........+...... |.. .+..+ ...+..+..+... ..
T Consensus 166 iP~v~~~~~~~~~~~~~~~~~~~~~~~--------------~~~----------~~~~~~~~~l~~~~~~~g~~~~~~~~ 221 (441)
T 2yjn_A 166 TPHARLLWGPDITTRARQNFLGLLPDQ--------------PEE----------HREDPLAEWLTWTLEKYGGPAFDEEV 221 (441)
T ss_dssp CCEEEECSSCCHHHHHHHHHHHHGGGS--------------CTT----------TCCCHHHHHHHHHHHHTTCCCCCGGG
T ss_pred CCEEEEecCCCcchhhhhhhhhhcccc--------------ccc----------cccchHHHHHHHHHHHcCCCCCCccc
Confidence 999988655433221111101000000 000 00000 1111122111111 00
Q ss_pred cCCcEEEEcCccccChHHHHhhhhccccCCCCCCCEEEeccCCCCCCCCCCCCCCCCCcchhhHhhhcccCCCCcEEEEE
Q 041419 206 SLSDGILVNTWDDLEPKTLGSLRDDNLLGRVCKAPVYAIGPLVRSPDVASPSTKTSPSDSRVIILDWLNEQPSQSVIYVS 285 (498)
Q Consensus 206 ~~~~~~lv~s~~~l~~~~~~~~~~~~~~~r~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs 285 (498)
...+..+.+..+.++. ++. ++. ..+++.... .+.++.+|++..+++++|||+
T Consensus 222 ~~~~~~l~~~~~~~~~------------~~~-~~~-~~~~~~~~~--------------~~~~~~~~l~~~~~~~~v~v~ 273 (441)
T 2yjn_A 222 VVGQWTIDPAPAAIRL------------DTG-LKT-VGMRYVDYN--------------GPSVVPEWLHDEPERRRVCLT 273 (441)
T ss_dssp TSCSSEEECSCGGGSC------------CCC-CCE-EECCCCCCC--------------SSCCCCGGGSSCCSSCEEEEE
T ss_pred cCCCeEEEecCccccC------------CCC-CCC-CceeeeCCC--------------CCcccchHhhcCCCCCEEEEE
Confidence 0112222222222221 000 111 122222111 123456798766677899999
Q ss_pred ccCCCCC---CHHHHHHHHHHHHhcCCcEEEEEcCCCCCCCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCc
Q 041419 286 FGSGGTL---SAKQMTELAWSLELSQQRFIWVVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWA 362 (498)
Q Consensus 286 ~GS~~~~---~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~ 362 (498)
+||+... ..+.+..++++++..+.+++|+.+..... ....+|+ |+.+.+|+
T Consensus 274 ~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~-----------------~l~~~~~---------~v~~~~~~ 327 (441)
T 2yjn_A 274 LGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLE-----------------GVANIPD---------NVRTVGFV 327 (441)
T ss_dssp C----------CCSTTTTHHHHHTSSSEEEECCCTTTTS-----------------SCSSCCS---------SEEECCSC
T ss_pred CCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchh-----------------hhccCCC---------CEEEecCC
Confidence 9998653 23456678899988899999988643110 0112232 89999999
Q ss_pred cHHHHhccCCcceeeecCCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHH
Q 041419 363 PQAEILAHPSVGGFLSHCGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKI 442 (498)
Q Consensus 363 pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~v 442 (498)
||.++|++++ +||||||+||++||+++|||+|++|+..||+.||+++ ++.|+|+.++. .+++.++|+++|+++
T Consensus 328 ~~~~ll~~ad--~~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~----~~~~~~~l~~~i~~l 400 (441)
T 2yjn_A 328 PMHALLPTCA--ATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRT-QEFGAGIALPV----PELTPDQLRESVKRV 400 (441)
T ss_dssp CHHHHGGGCS--EEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECCT----TTCCHHHHHHHHHHH
T ss_pred CHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHH-HHcCCEEEccc----ccCCHHHHHHHHHHH
Confidence 9999998888 7999999999999999999999999999999999999 68999999863 678999999999999
Q ss_pred hcCCcchHHHHHHHHHHHHHHH
Q 041419 443 MVDKEGHSSIRVRAMELKYGAQ 464 (498)
Q Consensus 443 l~~~~~~~~~~~~a~~l~~~~~ 464 (498)
|+| ++++++++++++.+.
T Consensus 401 l~~----~~~~~~~~~~~~~~~ 418 (441)
T 2yjn_A 401 LDD----PAHRAGAARMRDDML 418 (441)
T ss_dssp HHC----HHHHHHHHHHHHHHH
T ss_pred hcC----HHHHHHHHHHHHHHH
Confidence 998 788999999998855
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.2e-36 Score=313.38 Aligned_cols=366 Identities=19% Similarity=0.206 Sum_probs=235.7
Q ss_pred CCCCCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCC
Q 041419 1 MQSTKLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVN 80 (498)
Q Consensus 1 ~~~~~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (498)
|+++|++|||+|++.++.||++|+++||++|+++ ||+|++++++...+.+.+ .++++..++....... .
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~-G~~V~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~-~ 69 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVAR-GHRVTYAIPPVFADKVAA---------TGPRPVLYHSTLPGPD-A 69 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGGGHHHHHT---------TSCEEEECCCCSCCTT-S
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHHC-CCeEEEEeCHHHHHHHHh---------CCCEEEEcCCcCcccc-c
Confidence 7888888999999999999999999999999999 999999998875333222 2677777764211111 0
Q ss_pred C----CCchHHHH---HHHHHHhhHHHHHHHHhcCCCCcEEEeCCCchhHHHHHHHhCCcEEEEecchHHHHHH--Hhhh
Q 041419 81 P----DASLGEKI---LVLMHKSLPALRSAISAMKFRPTALIVDFFGTEAMDVADEFGLLKYMFIASNAWFLAC--FIHA 151 (498)
Q Consensus 81 ~----~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~--~~~~ 151 (498)
. ..+....+ ..........+.++++++ +||+||+|.+.+++..+|+++|||++.+++++...... ....
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 147 (430)
T 2iyf_A 70 DPEAWGSTLLDNVEPFLNDAIQALPQLADAYADD--IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAE 147 (430)
T ss_dssp CGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTS--CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHH
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHhhcc--CCCEEEECCccHHHHHHHHHcCCCEEEEeccccccccccccccc
Confidence 0 01222222 122233455666677766 99999999887788899999999999887654210000 0000
Q ss_pred hhhhhcccccccCCCCCcccCCCCCCCCcccccccccCCCchhHHHHHHHh------hcccCCcEEEEcCccccChHHHH
Q 041419 152 PAIDKKLLTDEHFNLEKPMELPGCMPVRFQDSLELFLHPNEPIFDFISSIG------MKMSLSDGILVNTWDDLEPKTLG 225 (498)
Q Consensus 152 p~~~~~~~~~~~~~~~~~~~~pg~~~l~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~lv~s~~~l~~~~~~ 225 (498)
+ ..... . ..++.. . + ...+..+..+.. ......+.+++++.++++...
T Consensus 148 ~-~~~~~-~----------~~~~~~--------~-~---~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~-- 201 (430)
T 2iyf_A 148 P-MWREP-R----------QTERGR--------A-Y---YARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA-- 201 (430)
T ss_dssp H-HHHHH-H----------HSHHHH--------H-H---HHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG--
T ss_pred c-hhhhh-c----------cchHHH--------H-H---HHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc--
Confidence 0 00000 0 000000 0 0 000111100000 001134667888877766531
Q ss_pred hhhhccccCCCCCCC-EEEeccCCCCCCCCCCCCCCCCCcchhhHhhhcccCCCCcEEEEEccCCCCCCHHHHHHHHHHH
Q 041419 226 SLRDDNLLGRVCKAP-VYAIGPLVRSPDVASPSTKTSPSDSRVIILDWLNEQPSQSVIYVSFGSGGTLSAKQMTELAWSL 304 (498)
Q Consensus 226 ~~~~~~~~~r~~~p~-v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al 304 (498)
... .++ ++++||+..... +..+|....+++++|||++||......+.+..+++++
T Consensus 202 --~~~-------~~~~v~~vG~~~~~~~---------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l 257 (430)
T 2iyf_A 202 --DRV-------DEDVYTFVGACQGDRA---------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAF 257 (430)
T ss_dssp --GGS-------CTTTEEECCCCC--------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHH
T ss_pred --ccC-------CCccEEEeCCcCCCCC---------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHH
Confidence 111 245 999998664321 1124655445677999999999755667788899999
Q ss_pred Hhc-CCcEEEEEcCCCCCCCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCccHHHHhccCCcceeeecCCcc
Q 041419 305 ELS-QQRFIWVVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWAPQAEILAHPSVGGFLSHCGWN 383 (498)
Q Consensus 305 ~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ItHgG~g 383 (498)
+.. +.+++|.++..... . ....++ +++.+.+|+||.++|++++ +||||||+|
T Consensus 258 ~~~~~~~~~~~~G~~~~~--------------~--~l~~~~---------~~v~~~~~~~~~~~l~~ad--~~v~~~G~~ 310 (430)
T 2iyf_A 258 GNLPGWHLVLQIGRKVTP--------------A--ELGELP---------DNVEVHDWVPQLAILRQAD--LFVTHAGAG 310 (430)
T ss_dssp TTCTTEEEEEECC---CG--------------G--GGCSCC---------TTEEEESSCCHHHHHTTCS--EEEECCCHH
T ss_pred hcCCCeEEEEEeCCCCCh--------------H--HhccCC---------CCeEEEecCCHHHHhhccC--EEEECCCcc
Confidence 885 77888887543110 0 011122 3799999999999999999 799999999
Q ss_pred hHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH
Q 041419 384 STVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGA 463 (498)
Q Consensus 384 s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~ 463 (498)
|++||+++|+|+|++|..+||+.|++++ ++.|+|+.++. +.++.++|+++|+++++| +++++++.++++.+
T Consensus 311 t~~Ea~~~G~P~i~~p~~~~q~~~a~~~-~~~g~g~~~~~----~~~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~ 381 (430)
T 2iyf_A 311 GSQEGLATATPMIAVPQAVDQFGNADML-QGLGVARKLAT----EEATADLLRETALALVDD----PEVARRLRRIQAEM 381 (430)
T ss_dssp HHHHHHHTTCCEEECCCSHHHHHHHHHH-HHTTSEEECCC----C-CCHHHHHHHHHHHHHC----HHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEECCCccchHHHHHHH-HHcCCEEEcCC----CCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 58899999863 568999999999999998 67888888887775
Q ss_pred HH
Q 041419 464 QK 465 (498)
Q Consensus 464 ~~ 465 (498)
..
T Consensus 382 ~~ 383 (430)
T 2iyf_A 382 AQ 383 (430)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=8.4e-36 Score=302.41 Aligned_cols=350 Identities=15% Similarity=0.121 Sum_probs=234.9
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCC-----------C
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANI-----------S 76 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----------~ 76 (498)
|||++++.++.||++|+++||++|+++ ||+|++++++...+.+... ++++..++.... +
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~-Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 70 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNA-GHQVVMAANQDMGPVVTGV---------GLPAVATTDLPIRHFITTDREGRP 70 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHT---------TCCEEESCSSCHHHHHHBCTTSCB
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHC-CCEEEEEeCHHHHHHHHhC---------CCEEEEeCCcchHHHHhhhcccCc
Confidence 799999999999999999999999999 9999999987643332222 556666553210 0
Q ss_pred CCCCCCCchHHHH-----HHHHHHhhHHHHHHHHhcCCCCcEEEeCCCchhHHHHHHHhCCcEEEEecchHHHHHHHhhh
Q 041419 77 SLVNPDASLGEKI-----LVLMHKSLPALRSAISAMKFRPTALIVDFFGTEAMDVADEFGLLKYMFIASNAWFLACFIHA 151 (498)
Q Consensus 77 ~~~~~~~~~~~~~-----~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 151 (498)
+.+.........+ ..........+.++++++ +||+||+|.+..++..+|+.+|||++.+...+...
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~------- 141 (384)
T 2p6p_A 71 EAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAW--RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA------- 141 (384)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC-------
T ss_pred cccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc--CCcEEEECcchhhHHHHHHhcCCCEEEeccCCccc-------
Confidence 0000110111111 112223455667777777 99999999887888899999999998765322100
Q ss_pred hhhhhcccccccCCCCCcccCCCCCCCCcccccccccCCCchhHHHHHHHh-hcccCCcEEEEcCccccChHHHHhhhhc
Q 041419 152 PAIDKKLLTDEHFNLEKPMELPGCMPVRFQDSLELFLHPNEPIFDFISSIG-MKMSLSDGILVNTWDDLEPKTLGSLRDD 230 (498)
Q Consensus 152 p~~~~~~~~~~~~~~~~~~~~pg~~~l~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lv~s~~~l~~~~~~~~~~~ 230 (498)
.++ ...+ ...+..+..+.. ......+.+++++...++..
T Consensus 142 ---------------------~~~--------~~~~---~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-------- 181 (384)
T 2p6p_A 142 ---------------------DGI--------HPGA---DAELRPELSELGLERLPAPDLFIDICPPSLRPA-------- 181 (384)
T ss_dssp ---------------------TTT--------HHHH---HHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT--------
T ss_pred ---------------------chh--------hHHH---HHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC--------
Confidence 000 0000 000111101110 01111456777776666543
Q ss_pred cccCCCCCC--CEEEeccCCCCCCCCCCCCCCCCCcchhhHhhhcccCCCCcEEEEEccCCCCC-----CHHHHHHHHHH
Q 041419 231 NLLGRVCKA--PVYAIGPLVRSPDVASPSTKTSPSDSRVIILDWLNEQPSQSVIYVSFGSGGTL-----SAKQMTELAWS 303 (498)
Q Consensus 231 ~~~~r~~~p--~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~-----~~~~~~~~~~a 303 (498)
++ .+ ++.++++ . . +.++.+|++..+++++|||++||+... +.+.+..++++
T Consensus 182 ----~~-~~~~~~~~~~~---~-~-------------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~a 239 (384)
T 2p6p_A 182 ----NA-APARMMRHVAT---S-R-------------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKD 239 (384)
T ss_dssp ----TS-CCCEECCCCCC---C-C-------------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHH
T ss_pred ----CC-CCCCceEecCC---C-C-------------CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHH
Confidence 11 11 2333321 1 1 124557887645667999999998654 45678889999
Q ss_pred HHhcCCcEEEEEcCCCCCCCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCccHHHHhccCCcceeeecCCcc
Q 041419 304 LELSQQRFIWVVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWAPQAEILAHPSVGGFLSHCGWN 383 (498)
Q Consensus 304 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ItHgG~g 383 (498)
+++.+.+++|+.+.. .. +.+. .. .+|+.+ +|+||.++|++++ +||||||+|
T Consensus 240 l~~~~~~~~~~~g~~--------------------~~----~~l~-~~-~~~v~~-~~~~~~~~l~~~d--~~v~~~G~~ 290 (384)
T 2p6p_A 240 LVRWDVELIVAAPDT--------------------VA----EALR-AE-VPQARV-GWTPLDVVAPTCD--LLVHHAGGV 290 (384)
T ss_dssp HHTTTCEEEEECCHH--------------------HH----HHHH-HH-CTTSEE-ECCCHHHHGGGCS--EEEECSCTT
T ss_pred HhcCCcEEEEEeCCC--------------------CH----HhhC-CC-CCceEE-cCCCHHHHHhhCC--EEEeCCcHH
Confidence 999899999987421 00 1111 12 237899 9999999998888 899999999
Q ss_pred hHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH
Q 041419 384 STVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGA 463 (498)
Q Consensus 384 s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~ 463 (498)
|++||+++|+|+|++|...||+.||+++ ++.|+|+.++. +..+.++|+++|+++|.| ++++++++++++.+
T Consensus 291 t~~Ea~~~G~P~v~~p~~~dq~~~a~~~-~~~g~g~~~~~----~~~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~ 361 (384)
T 2p6p_A 291 STLTGLSAGVPQLLIPKGSVLEAPARRV-ADYGAAIALLP----GEDSTEAIADSCQELQAK----DTYARRAQDLSREI 361 (384)
T ss_dssp HHHHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECCT----TCCCHHHHHHHHHHHHHC----HHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEccCcccchHHHHHH-HHCCCeEecCc----CCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 68999999863 568999999999999998 78899999999986
Q ss_pred HHhhccCCchHHHHHHH
Q 041419 464 QKATSNSGSSYKSLSQV 480 (498)
Q Consensus 464 ~~a~~~~g~~~~~~~~~ 480 (498)
.. ..+..+.++.+
T Consensus 362 ~~----~~~~~~~~~~i 374 (384)
T 2p6p_A 362 SG----MPLPATVVTAL 374 (384)
T ss_dssp HT----SCCHHHHHHHH
T ss_pred Hh----CCCHHHHHHHH
Confidence 63 34444444433
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=2.4e-34 Score=293.20 Aligned_cols=345 Identities=15% Similarity=0.113 Sum_probs=212.8
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCC-C---------
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLA-N--------- 74 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~--------- 74 (498)
..+|||+|++.++.||++|++.|+++|+++ ||+|++++++...+.+.+. ++.+..++.. .
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~-GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~ 82 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAA-GHEVLVAASENMGPTVTGA---------GLPFAPTCPSLDMPEVLSWDR 82 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEEEGGGHHHHHHT---------TCCEEEEESSCCHHHHHSBCT
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHC-CCEEEEEcCHHHHHHHHhC---------CCeeEecCCccchHhhhhhhc
Confidence 567999999999999999999999999999 9999999987655444333 4444444310 0
Q ss_pred --CCCCCCCCC-chH----HHHHHHHHHhhHHHHHHHHhcCCCCcEEEeCCCchhHHHHHHHhCCcEEEEecchHHHHHH
Q 041419 75 --ISSLVNPDA-SLG----EKILVLMHKSLPALRSAISAMKFRPTALIVDFFGTEAMDVADEFGLLKYMFIASNAWFLAC 147 (498)
Q Consensus 75 --~~~~~~~~~-~~~----~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~ 147 (498)
....++... ... ..+..........+.++++++ +||+||+|...+++..+|+.+|||++.+..........
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~ 160 (398)
T 4fzr_A 83 EGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW--KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELI 160 (398)
T ss_dssp TSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHH
T ss_pred cCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhh
Confidence 000001000 111 112233344555778888888 99999999888888899999999999866443211100
Q ss_pred HhhhhhhhhcccccccCCCCCcccCCCCCCCCcccccccccCCCchhHHHHHHHh-hcccCCcEEEEcCccccChHHHHh
Q 041419 148 FIHAPAIDKKLLTDEHFNLEKPMELPGCMPVRFQDSLELFLHPNEPIFDFISSIG-MKMSLSDGILVNTWDDLEPKTLGS 226 (498)
Q Consensus 148 ~~~~p~~~~~~~~~~~~~~~~~~~~pg~~~l~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lv~s~~~l~~~~~~~ 226 (498)
. +..... +.....+.. ......+..+......+....
T Consensus 161 ~---~~~~~~------------------------------------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 198 (398)
T 4fzr_A 161 K---SAGVGE------------------------------------LAPELAELGLTDFPDPLLSIDVCPPSMEAQP--- 198 (398)
T ss_dssp H---HHHHHH------------------------------------THHHHHTTTCSSCCCCSEEEECSCGGGC------
T ss_pred h---HHHHHH------------------------------------HHHHHHHcCCCCCCCCCeEEEeCChhhCCCC---
Confidence 0 000000 000000000 001111223322222222110
Q ss_pred hhhccccCCCCCCCEEEeccCCCCCCCCCCCCCCCCCcchhhHhhhcccCCCCcEEEEEccCCCCC--------CHHHHH
Q 041419 227 LRDDNLLGRVCKAPVYAIGPLVRSPDVASPSTKTSPSDSRVIILDWLNEQPSQSVIYVSFGSGGTL--------SAKQMT 298 (498)
Q Consensus 227 ~~~~~~~~r~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~--------~~~~~~ 298 (498)
.+....+.+.... ....++.+|+...+++++|||++||.... ..+.+.
T Consensus 199 -----------~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~ 254 (398)
T 4fzr_A 199 -----------KPGTTKMRYVPYN-------------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQ 254 (398)
T ss_dssp ------------CCCEECCCCCCC-------------CSSCCCCHHHHSCCSSCEEECC----------------CCSHH
T ss_pred -----------CCCCCCeeeeCCC-------------CCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHH
Confidence 0111111111110 01223456666555677999999998533 335678
Q ss_pred HHHHHHHhcCCcEEEEEcCCCCCCCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCccHHHHhccCCcceeee
Q 041419 299 ELAWSLELSQQRFIWVVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWAPQAEILAHPSVGGFLS 378 (498)
Q Consensus 299 ~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~It 378 (498)
.+++++++.+.+++|+.+..... ....+|+ |+.+.+|+|+.++|++++ +|||
T Consensus 255 ~~~~al~~~~~~~v~~~~~~~~~-----------------~l~~~~~---------~v~~~~~~~~~~ll~~ad--~~v~ 306 (398)
T 4fzr_A 255 ALSQELPKLGFEVVVAVSDKLAQ-----------------TLQPLPE---------GVLAAGQFPLSAIMPACD--VVVH 306 (398)
T ss_dssp HHHHHGGGGTCEEEECCCC-------------------------CCT---------TEEEESCCCHHHHGGGCS--EEEE
T ss_pred HHHHHHHhCCCEEEEEeCCcchh-----------------hhccCCC---------cEEEeCcCCHHHHHhhCC--EEEe
Confidence 89999998899999987543110 1122333 899999999999999988 7999
Q ss_pred cCCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHH
Q 041419 379 HCGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAME 458 (498)
Q Consensus 379 HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~ 458 (498)
|||.||+.||+++|+|+|++|...||+.|+.++ ++.|+|+.++. +++++++|+++|+++|+| +++++++++
T Consensus 307 ~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~-~~~g~g~~~~~----~~~~~~~l~~ai~~ll~~----~~~~~~~~~ 377 (398)
T 4fzr_A 307 HGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLL-HAAGAGVEVPW----EQAGVESVLAACARIRDD----SSYVGNARR 377 (398)
T ss_dssp CCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHH-HHTTSEEECC-----------CHHHHHHHHHHC----THHHHHHHH
T ss_pred cCCHHHHHHHHHhCCCEEecCCchhHHHHHHHH-HHcCCEEecCc----ccCCHHHHHHHHHHHHhC----HHHHHHHHH
Confidence 999999999999999999999999999999999 68999999873 667999999999999999 678888888
Q ss_pred HHHHHH
Q 041419 459 LKYGAQ 464 (498)
Q Consensus 459 l~~~~~ 464 (498)
.++.+.
T Consensus 378 ~~~~~~ 383 (398)
T 4fzr_A 378 LAAEMA 383 (398)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 888743
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=2.4e-33 Score=285.74 Aligned_cols=338 Identities=15% Similarity=0.178 Sum_probs=225.2
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCC-C--------
Q 041419 6 LKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANI-S-------- 76 (498)
Q Consensus 6 ~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~-------- 76 (498)
..|||+|++.++.||++|++.||++|+++ ||+|+++++ .+.+.+... ++.+..++.... .
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~-~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTA-GHDVLIAVA-EHADRAAAA---------GLEVVDVAPDYSAVKVFEQVAK 87 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEES-SCHHHHHTT---------TCEEEESSTTCCHHHHHHHHHH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHC-CCEEEEecc-chHHHHHhC---------CCeeEecCCccCHHHHhhhccc
Confidence 45899999999999999999999999999 999999998 544443332 677776653210 0
Q ss_pred -----------CCCCCCCchHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEeCCCchhHHHHHHHhCCcEEEEecchHHHH
Q 041419 77 -----------SLVNPDASLGEKILVLMHKSLPALRSAISAMKFRPTALIVDFFGTEAMDVADEFGLLKYMFIASNAWFL 145 (498)
Q Consensus 77 -----------~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~ 145 (498)
............+..........+.++++++ +||+||+|...+++..+|+.+|||++.+........
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~ 165 (398)
T 3oti_A 88 DNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY--RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTR 165 (398)
T ss_dssp HCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCT
T ss_pred CCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCcc
Confidence 0001111222334445556677888999999 999999998888888999999999987653321000
Q ss_pred HHHhhhhhhhhcccccccCCCCCcccCCCCCCCCcccccccccCCCchhHHHHHHHhhcccCCcEEEEcCccccChHHHH
Q 041419 146 ACFIHAPAIDKKLLTDEHFNLEKPMELPGCMPVRFQDSLELFLHPNEPIFDFISSIGMKMSLSDGILVNTWDDLEPKTLG 225 (498)
Q Consensus 146 ~~~~~~p~~~~~~~~~~~~~~~~~~~~pg~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~s~~~l~~~~~~ 225 (498)
.. . ... ...+..+..+...........+......+...
T Consensus 166 ~~-------~-----------------------------~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 203 (398)
T 3oti_A 166 GM-------H-----------------------------RSI---ASFLTDLMDKHQVSLPEPVATIESFPPSLLLE--- 203 (398)
T ss_dssp TH-------H-----------------------------HHH---HTTCHHHHHHTTCCCCCCSEEECSSCGGGGTT---
T ss_pred ch-------h-----------------------------hHH---HHHHHHHHHHcCCCCCCCCeEEEeCCHHHCCC---
Confidence 00 0 000 00011111111111111122222211111110
Q ss_pred hhhhccccCCCCCCCEEEeccCCCCCCCCCCCCCCCCCcchhhHhhhcccCCCCcEEEEEccCCCCC--CHHHHHHHHHH
Q 041419 226 SLRDDNLLGRVCKAPVYAIGPLVRSPDVASPSTKTSPSDSRVIILDWLNEQPSQSVIYVSFGSGGTL--SAKQMTELAWS 303 (498)
Q Consensus 226 ~~~~~~~~~r~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~--~~~~~~~~~~a 303 (498)
.. +. ..++.++ |. . .+.+..+|+...+++++|||++||.... ..+.+..++++
T Consensus 204 --~~-----~~-~~~~~~~-~~---~-------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~ 258 (398)
T 3oti_A 204 --AE-----PE-GWFMRWV-PY---G-------------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAA 258 (398)
T ss_dssp --SC-----CC-SBCCCCC-CC---C-------------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHH
T ss_pred --CC-----CC-CCCcccc-CC---C-------------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHH
Confidence 00 00 1111111 00 0 1123445766556678999999998432 55678889999
Q ss_pred HHhcCCcEEEEEcCCCCCCCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCccHHHHhccCCcceeeecCCcc
Q 041419 304 LELSQQRFIWVVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWAPQAEILAHPSVGGFLSHCGWN 383 (498)
Q Consensus 304 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ItHgG~g 383 (498)
+++.+.+++|+.+..... ....+|+ |+.+.+|+|+.++|++++ +||||||.|
T Consensus 259 l~~~~~~~v~~~g~~~~~-----------------~l~~~~~---------~v~~~~~~~~~~ll~~ad--~~v~~~G~~ 310 (398)
T 3oti_A 259 AGEVDADFVLALGDLDIS-----------------PLGTLPR---------NVRAVGWTPLHTLLRTCT--AVVHHGGGG 310 (398)
T ss_dssp HHTSSSEEEEECTTSCCG-----------------GGCSCCT---------TEEEESSCCHHHHHTTCS--EEEECCCHH
T ss_pred HHcCCCEEEEEECCcChh-----------------hhccCCC---------cEEEEccCCHHHHHhhCC--EEEECCCHH
Confidence 999899999988653210 1122333 899999999999999988 799999999
Q ss_pred hHHHHHhhCCcEEeccccccchhhH--HHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Q 041419 384 STVESIVNGVPMIAWPLHAEQKMNA--TMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKY 461 (498)
Q Consensus 384 s~~eal~~GvP~v~~P~~~DQ~~na--~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~ 461 (498)
|+.||+++|+|+|++|+..||+.|| .++ ++.|+|+.++. .+.+++.|+ ++|+| ++++++++++++
T Consensus 311 t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~-~~~g~g~~~~~----~~~~~~~l~----~ll~~----~~~~~~~~~~~~ 377 (398)
T 3oti_A 311 TVMTAIDAGIPQLLAPDPRDQFQHTAREAV-SRRGIGLVSTS----DKVDADLLR----RLIGD----ESLRTAAREVRE 377 (398)
T ss_dssp HHHHHHHHTCCEEECCCTTCCSSCTTHHHH-HHHTSEEECCG----GGCCHHHHH----HHHHC----HHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEcCCCchhHHHHHHHHH-HHCCCEEeeCC----CCCCHHHHH----HHHcC----HHHHHHHHHHHH
Confidence 9999999999999999999999999 999 69999999873 567777777 78888 788999999988
Q ss_pred HHH
Q 041419 462 GAQ 464 (498)
Q Consensus 462 ~~~ 464 (498)
.+.
T Consensus 378 ~~~ 380 (398)
T 3oti_A 378 EMV 380 (398)
T ss_dssp HHH
T ss_pred HHH
Confidence 855
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=1.4e-32 Score=279.30 Aligned_cols=354 Identities=14% Similarity=0.099 Sum_probs=224.9
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEec-CCCC-CCC----CCC
Q 041419 7 KPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTL-PLAN-ISS----LVN 80 (498)
Q Consensus 7 ~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~----~~~ 80 (498)
+|||+|++.++.||++|++.|+++|+++ ||+|++++++...+.+... ++.+..+ +... ... ..+
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~-GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~ 70 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQAS-GHEVLIAAPPELQATAHGA---------GLTTAGIRGNDRTGDTGGTTQLR 70 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHT-TCEEEEEECHHHHHHHHHB---------TCEEEEC--------------CC
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHC-CCEEEEecChhhHHHHHhC---------CCceeeecCCccchhhhhhhccc
Confidence 5899999999999999999999999999 9999999987654443334 4444444 1100 000 000
Q ss_pred C---------CCchHHHHHHHHHHh-------hHHHHHHHHhcCCCCcEEEeCCCchhHHHHHHHhCCcEEEEecchHHH
Q 041419 81 P---------DASLGEKILVLMHKS-------LPALRSAISAMKFRPTALIVDFFGTEAMDVADEFGLLKYMFIASNAWF 144 (498)
Q Consensus 81 ~---------~~~~~~~~~~~~~~~-------~~~l~~~l~~~~~~pD~vI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~ 144 (498)
. .......+....... ...+.++++++ +||+||+|...+.+..+|+.+|||++.+.......
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 148 (391)
T 3tsa_A 71 FPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW--RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT 148 (391)
T ss_dssp SCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT
T ss_pred ccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc--CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc
Confidence 0 011112222333333 66778888888 99999999878888889999999998865433111
Q ss_pred HHHHhhhhhhhhcccccccCCCCCcccCCCCCCCCcccccccccCCCchhHHHHHHHhh-cccCCcEEEEcCccccChHH
Q 041419 145 LACFIHAPAIDKKLLTDEHFNLEKPMELPGCMPVRFQDSLELFLHPNEPIFDFISSIGM-KMSLSDGILVNTWDDLEPKT 223 (498)
Q Consensus 145 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~pg~~~l~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~lv~s~~~l~~~~ 223 (498)
.... .+... ..+.....+... .....+..+.....+++..
T Consensus 149 ~~~~--~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 189 (391)
T 3tsa_A 149 AGPF--SDRAH------------------------------------ELLDPVCRHHGLTGLPTPELILDPCPPSLQAS- 189 (391)
T ss_dssp TTHH--HHHHH------------------------------------HHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT-
T ss_pred cccc--cchHH------------------------------------HHHHHHHHHcCCCCCCCCceEEEecChhhcCC-
Confidence 0000 00000 001111011110 0111133333333332221
Q ss_pred HHhhhhccccCCCCCCCEEEeccCCCCCCCCCCCCCCCCCcchhhHhhhcccCCCCcEEEEEccCCCC---CCHHHHHHH
Q 041419 224 LGSLRDDNLLGRVCKAPVYAIGPLVRSPDVASPSTKTSPSDSRVIILDWLNEQPSQSVIYVSFGSGGT---LSAKQMTEL 300 (498)
Q Consensus 224 ~~~~~~~~~~~r~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~---~~~~~~~~~ 300 (498)
.+. . ..++.++ |.. .+....+|+...+++++||+++||... ...+.+..+
T Consensus 190 ----~~~-----~-~~~~~~~-p~~----------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~ 242 (391)
T 3tsa_A 190 ----DAP-----Q-GAPVQYV-PYN----------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAV 242 (391)
T ss_dssp ----TSC-----C-CEECCCC-CCC----------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHH
T ss_pred ----CCC-----c-cCCeeee-cCC----------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHH
Confidence 000 0 0012222 110 112334677655667899999999832 236667788
Q ss_pred HHHHHhc-CCcEEEEEcCCCCCCCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCccHHHHhccCCcceeeec
Q 041419 301 AWSLELS-QQRFIWVVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWAPQAEILAHPSVGGFLSH 379 (498)
Q Consensus 301 ~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ItH 379 (498)
+++ ++. +.+++|..+.... . ....++ +|+.+.+|+|+.++|++++ +||||
T Consensus 243 ~~~-~~~p~~~~v~~~~~~~~---------------~--~l~~~~---------~~v~~~~~~~~~~ll~~ad--~~v~~ 293 (391)
T 3tsa_A 243 AAA-TELPGVEAVIAVPPEHR---------------A--LLTDLP---------DNARIAESVPLNLFLRTCE--LVICA 293 (391)
T ss_dssp HHH-HTSTTEEEEEECCGGGG---------------G--GCTTCC---------TTEEECCSCCGGGTGGGCS--EEEEC
T ss_pred HHh-ccCCCeEEEEEECCcch---------------h--hcccCC---------CCEEEeccCCHHHHHhhCC--EEEeC
Confidence 888 777 7788887643211 0 011122 3799999999999998888 79999
Q ss_pred CCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCC--CCcCHHHHHHHHHHHhcCCcchHHHHHHHH
Q 041419 380 CGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTE--SLVTRQEIEMLVRKIMVDKEGHSSIRVRAM 457 (498)
Q Consensus 380 gG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~--~~~~~~~l~~al~~vl~~~~~~~~~~~~a~ 457 (498)
||.||+.||+++|+|+|++|...||+.|+.++ ++.|+|+.++ . ...+.+.|.++|+++|+| ++++++++
T Consensus 294 ~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~-~~~g~g~~~~----~~~~~~~~~~l~~ai~~ll~~----~~~~~~~~ 364 (391)
T 3tsa_A 294 GGSGTAFTATRLGIPQLVLPQYFDQFDYARNL-AAAGAGICLP----DEQAQSDHEQFTDSIATVLGD----TGFAAAAI 364 (391)
T ss_dssp CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHH-HHTTSEEECC----SHHHHTCHHHHHHHHHHHHTC----THHHHHHH
T ss_pred CCHHHHHHHHHhCCCEEecCCcccHHHHHHHH-HHcCCEEecC----cccccCCHHHHHHHHHHHHcC----HHHHHHHH
Confidence 99999999999999999999999999999999 6999999975 2 247899999999999999 66788888
Q ss_pred HHHHHHHHhhccCCchHHHHHHH
Q 041419 458 ELKYGAQKATSNSGSSYKSLSQV 480 (498)
Q Consensus 458 ~l~~~~~~a~~~~g~~~~~~~~~ 480 (498)
++++.+. +..+..+.++.+
T Consensus 365 ~~~~~~~----~~~~~~~~~~~i 383 (391)
T 3tsa_A 365 KLSDEIT----AMPHPAALVRTL 383 (391)
T ss_dssp HHHHHHH----TSCCHHHHHHHH
T ss_pred HHHHHHH----cCCCHHHHHHHH
Confidence 8887754 344544444433
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.97 E-value=4.9e-30 Score=262.18 Aligned_cols=348 Identities=14% Similarity=0.176 Sum_probs=227.2
Q ss_pred CCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCC----------
Q 041419 4 TKLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLA---------- 73 (498)
Q Consensus 4 ~~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------- 73 (498)
...+|||+|++.++.||++|++.||++|+++ ||+|++++++...+.+... ++.+..++..
T Consensus 17 ~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~-GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~ 86 (412)
T 3otg_A 17 EGRHMRVLFASLGTHGHTYPLLPLATAARAA-GHEVTFATGEGFAGTLRKL---------GFEPVATGMPVFDGFLAALR 86 (412)
T ss_dssp -CCSCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECGGGHHHHHHT---------TCEEEECCCCHHHHHHHHHH
T ss_pred ccceeEEEEEcCCCcccHHHHHHHHHHHHHC-CCEEEEEccHHHHHHHHhc---------CCceeecCcccccchhhhhh
Confidence 3677999999999999999999999999999 9999999987533222111 6777766630
Q ss_pred ---CCCCCCCC------CCchHHHHHHH-HHHhhHHHHHHHHhcCCCCcEEEeCCCchhHHHHHHHhCCcEEEEecchHH
Q 041419 74 ---NISSLVNP------DASLGEKILVL-MHKSLPALRSAISAMKFRPTALIVDFFGTEAMDVADEFGLLKYMFIASNAW 143 (498)
Q Consensus 74 ---~~~~~~~~------~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~a~~~A~~lgiP~v~~~~~~~~ 143 (498)
..... +. .......+... .......+.++++++ +||+||+|...+++..+|+++|||++........
T Consensus 87 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 163 (412)
T 3otg_A 87 IRFDTDSP-EGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL--RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDT 163 (412)
T ss_dssp HHHSCSCC-TTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCC
T ss_pred hhhcccCC-ccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc--CCCEEEECchhhHHHHHHHHcCCCEEEecccccC
Confidence 00000 00 01111122222 233456778888888 9999999987777888999999999876533211
Q ss_pred HHHHHhhhhhhhhcccccccCCCCCcccCCCCCCCCcccccccccCCCchhHHHHHHHhh------cccCCcEEEEcCcc
Q 041419 144 FLACFIHAPAIDKKLLTDEHFNLEKPMELPGCMPVRFQDSLELFLHPNEPIFDFISSIGM------KMSLSDGILVNTWD 217 (498)
Q Consensus 144 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~pg~~~l~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~lv~s~~ 217 (498)
..... +... ..+..+..+... .....+.++..+..
T Consensus 164 ~~~~~---~~~~------------------------------------~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~ 204 (412)
T 3otg_A 164 PDDLT---RSIE------------------------------------EEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPP 204 (412)
T ss_dssp CSHHH---HHHH------------------------------------HHHHHHHHHTTCCCCSSCCGGGGCCEEECSCG
T ss_pred chhhh---HHHH------------------------------------HHHHHHHHHcCCCCCcccccCCCCeEEeeCCH
Confidence 00000 0000 000000000000 01223344444444
Q ss_pred ccChHHHHhhhhccccCCCCCCCEEEeccCCCCCCCCCCCCCCCCCcchhhHhhh-cccCCCCcEEEEEccCCCCCCHHH
Q 041419 218 DLEPKTLGSLRDDNLLGRVCKAPVYAIGPLVRSPDVASPSTKTSPSDSRVIILDW-LNEQPSQSVIYVSFGSGGTLSAKQ 296 (498)
Q Consensus 218 ~l~~~~~~~~~~~~~~~r~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~vV~vs~GS~~~~~~~~ 296 (498)
+++..... . ......+-+..... ..+..+| ....+++++||+++||......+.
T Consensus 205 ~~~~~~~~----~-------~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~ 259 (412)
T 3otg_A 205 SLQEPEFR----A-------RPRRHELRPVPFAE--------------QGDLPAWLSSRDTARPLVYLTLGTSSGGTVEV 259 (412)
T ss_dssp GGSCHHHH----T-------CTTEEECCCCCCCC--------------CCCCCGGGGGSCTTSCEEEEECTTTTCSCHHH
T ss_pred HhcCCccc----C-------CCCcceeeccCCCC--------------CCCCCCccccccCCCCEEEEEcCCCCcCcHHH
Confidence 33322100 0 01111111111110 1123345 222345679999999987556677
Q ss_pred HHHHHHHHHhcCCcEEEEEcCCCCCCCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCccHHHHhccCCccee
Q 041419 297 MTELAWSLELSQQRFIWVVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWAPQAEILAHPSVGGF 376 (498)
Q Consensus 297 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ 376 (498)
+.++++++++.+.+++|..+..... . ....++ +++.+.+|+|+.++|++++ +|
T Consensus 260 ~~~~~~~l~~~~~~~~~~~g~~~~~--------------~--~l~~~~---------~~v~~~~~~~~~~~l~~ad--~~ 312 (412)
T 3otg_A 260 LRAAIDGLAGLDADVLVASGPSLDV--------------S--GLGEVP---------ANVRLESWVPQAALLPHVD--LV 312 (412)
T ss_dssp HHHHHHHHHTSSSEEEEECCSSCCC--------------T--TCCCCC---------TTEEEESCCCHHHHGGGCS--EE
T ss_pred HHHHHHHHHcCCCEEEEEECCCCCh--------------h--hhccCC---------CcEEEeCCCCHHHHHhcCc--EE
Confidence 8889999998889999988654210 0 112223 2789999999999999999 79
Q ss_pred eecCCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHH
Q 041419 377 LSHCGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRA 456 (498)
Q Consensus 377 ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a 456 (498)
|+|||+||+.||+++|+|+|++|...||..|+.++ ++.|+|..++. +.+++++|+++|+++|.| +++++++
T Consensus 313 v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v-~~~g~g~~~~~----~~~~~~~l~~ai~~ll~~----~~~~~~~ 383 (412)
T 3otg_A 313 VHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAV-AQAGAGDHLLP----DNISPDSVSGAAKRLLAE----ESYRAGA 383 (412)
T ss_dssp EESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HHHTSEEECCG----GGCCHHHHHHHHHHHHHC----HHHHHHH
T ss_pred EECCchHHHHHHHHhCCCEEecCCchhHHHHHHHH-HHcCCEEecCc----ccCCHHHHHHHHHHHHhC----HHHHHHH
Confidence 99999999999999999999999999999999999 68999999874 567999999999999999 6778887
Q ss_pred HHHHHHHH
Q 041419 457 MELKYGAQ 464 (498)
Q Consensus 457 ~~l~~~~~ 464 (498)
.+.++.+.
T Consensus 384 ~~~~~~~~ 391 (412)
T 3otg_A 384 RAVAAEIA 391 (412)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77777754
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.96 E-value=1e-28 Score=248.51 Aligned_cols=324 Identities=15% Similarity=0.098 Sum_probs=195.5
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCCCCCchHH
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVNPDASLGE 87 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 87 (498)
.+|+|+..|+.||++|.++||++|+++ ||+|+|++++...+ ...++.. ++.+..++....... . ..+...
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~-g~~V~~vg~~~g~e---~~~v~~~----g~~~~~i~~~~~~~~-~-~~~~~~ 72 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQAR-GYAVHWLGTPRGIE---NDLVPKA----GLPLHLIQVSGLRGK-G-LKSLVK 72 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECSSSTH---HHHTGGG----TCCEEECC----------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhC-CCEEEEEECCchHh---hchhhhc----CCcEEEEECCCcCCC-C-HHHHHH
Confidence 589999988889999999999999999 99999999775322 1223322 566666664332211 0 011111
Q ss_pred HHHHHHHHhhHHHHHHHHhcCCCCcEEEeCCCch--hHHHHHHHhCCcEEEEecchHHHHHHHhhhhhhhhcccccccCC
Q 041419 88 KILVLMHKSLPALRSAISAMKFRPTALIVDFFGT--EAMDVADEFGLLKYMFIASNAWFLACFIHAPAIDKKLLTDEHFN 165 (498)
Q Consensus 88 ~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~--~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 165 (498)
....+ -........+++++ +||+||.+.... .+..+|+.+|||+++.-..
T Consensus 73 ~~~~~-~~~~~~~~~~l~~~--~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n------------------------- 124 (365)
T 3s2u_A 73 APLEL-LKSLFQALRVIRQL--RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN------------------------- 124 (365)
T ss_dssp CHHHH-HHHHHHHHHHHHHH--CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS-------------------------
T ss_pred HHHHH-HHHHHHHHHHHHhc--CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc-------------------------
Confidence 11122 12234556788888 999999885444 3457889999999853210
Q ss_pred CCCcccCCCCCCCCcccccccccCCCchhHHHHHHHhhcccCCcEEEEcCccccChHHHHhhhhccccCCCCCCCEEEec
Q 041419 166 LEKPMELPGCMPVRFQDSLELFLHPNEPIFDFISSIGMKMSLSDGILVNTWDDLEPKTLGSLRDDNLLGRVCKAPVYAIG 245 (498)
Q Consensus 166 ~~~~~~~pg~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~s~~~l~~~~~~~~~~~~~~~r~~~p~v~~vG 245 (498)
.+||+ . .+... +..+.++ .++++..+. ..+.+++|
T Consensus 125 -----~~~G~------------------~----nr~l~--~~a~~v~-~~~~~~~~~---------------~~k~~~~g 159 (365)
T 3s2u_A 125 -----AVAGT------------------A----NRSLA--PIARRVC-EAFPDTFPA---------------SDKRLTTG 159 (365)
T ss_dssp -----SSCCH------------------H----HHHHG--GGCSEEE-ESSTTSSCC------------------CEECC
T ss_pred -----hhhhh------------------H----HHhhc--cccceee-ecccccccC---------------cCcEEEEC
Confidence 12221 0 11111 1122232 223221110 23467778
Q ss_pred cCCCCCCCCCCCCCCCCCcchhhHhhhcccCCCCcEEEEEccCCCCCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCC
Q 041419 246 PLVRSPDVASPSTKTSPSDSRVIILDWLNEQPSQSVIYVSFGSGGTLSAKQMTELAWSLELS----QQRFIWVVRPPVEN 321 (498)
Q Consensus 246 pl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~ 321 (498)
+....... . +......+ .+.+++|+|..||...... .+.+.++++.. +..++|+.+...
T Consensus 160 ~pvr~~~~-------~----~~~~~~~~--~~~~~~ilv~gGs~g~~~~--~~~~~~al~~l~~~~~~~vi~~~G~~~-- 222 (365)
T 3s2u_A 160 NPVRGELF-------L----DAHARAPL--TGRRVNLLVLGGSLGAEPL--NKLLPEALAQVPLEIRPAIRHQAGRQH-- 222 (365)
T ss_dssp CCCCGGGC-------C----CTTSSCCC--TTSCCEEEECCTTTTCSHH--HHHHHHHHHTSCTTTCCEEEEECCTTT--
T ss_pred CCCchhhc-------c----chhhhccc--CCCCcEEEEECCcCCcccc--chhhHHHHHhcccccceEEEEecCccc--
Confidence 55443220 0 00111112 2345689999998865432 22355566544 345667664321
Q ss_pred CCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCccHH-HHhccCCcceeeecCCcchHHHHHhhCCcEEeccc
Q 041419 322 DVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWAPQA-EILAHPSVGGFLSHCGWNSTVESIVNGVPMIAWPL 400 (498)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~-~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~ 400 (498)
.+.+.+.+. .. ..++.+.+|+++. ++|+.++ ++|||+|.+|++|++++|+|+|++|+
T Consensus 223 ------------------~~~~~~~~~-~~-~~~~~v~~f~~dm~~~l~~aD--lvI~raG~~Tv~E~~a~G~P~Ilip~ 280 (365)
T 3s2u_A 223 ------------------AEITAERYR-TV-AVEADVAPFISDMAAAYAWAD--LVICRAGALTVSELTAAGLPAFLVPL 280 (365)
T ss_dssp ------------------HHHHHHHHH-HT-TCCCEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECC-
T ss_pred ------------------cccccceec-cc-ccccccccchhhhhhhhccce--EEEecCCcchHHHHHHhCCCeEEecc
Confidence 111111111 11 2267777999874 7899999 79999999999999999999999998
Q ss_pred c----ccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHH
Q 041419 401 H----AEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAME 458 (498)
Q Consensus 401 ~----~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~ 458 (498)
. .+|..||+.+ ++.|+|+.++. ++++++.|.++|.++|.|++.+.+|++++++
T Consensus 281 p~~~~~~Q~~NA~~l-~~~G~a~~l~~----~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~ 337 (365)
T 3s2u_A 281 PHAIDDHQTRNAEFL-VRSGAGRLLPQ----KSTGAAELAAQLSEVLMHPETLRSMADQARS 337 (365)
T ss_dssp ----CCHHHHHHHHH-HTTTSEEECCT----TTCCHHHHHHHHHHHHHCTHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHH-HHCCCEEEeec----CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHh
Confidence 3 5899999999 59999999873 7789999999999999996554445554443
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=8.3e-26 Score=202.05 Aligned_cols=163 Identities=23% Similarity=0.391 Sum_probs=137.1
Q ss_pred cchhhHhhhcccCCCCcEEEEEccCCC-CCCHHHHHHHHHHHHhcCCcEEEEEcCCCCCCCCCcccccccCCCCCccccc
Q 041419 264 DSRVIILDWLNEQPSQSVIYVSFGSGG-TLSAKQMTELAWSLELSQQRFIWVVRPPVENDVSGSYLTVVDNNSAGKLEDY 342 (498)
Q Consensus 264 ~~~~~~~~~l~~~~~~~vV~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (498)
+++.++.+|++..+++++|||++||.. ....+.+..+++++++.+.+++|+.+... ...
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~--------------------~~~ 65 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK--------------------PDT 65 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC--------------------CTT
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC--------------------ccc
Confidence 568899999987667789999999985 44667788899999988899999985431 122
Q ss_pred CChhhhhhcCCCceeecCCccHHHHhccCCcceeeecCCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEee
Q 041419 343 LPHGFLTRTDKVGLVVPAWAPQAEILAHPSVGGFLSHCGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSK 422 (498)
Q Consensus 343 lp~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~ 422 (498)
+++ |+.+.+|+||.++|.|+++.+||||||+||++||+++|+|+|++|...||+.||.++ ++.|+|+.++
T Consensus 66 ~~~---------~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~~ 135 (170)
T 2o6l_A 66 LGL---------NTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRVD 135 (170)
T ss_dssp CCT---------TEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEECC
T ss_pred CCC---------cEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEec
Confidence 333 788999999999996666669999999999999999999999999999999999999 6899999986
Q ss_pred ccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH
Q 041419 423 ELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGAQ 464 (498)
Q Consensus 423 ~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~~ 464 (498)
. .+++.++|.++|++++.| ++|+++++++++.++
T Consensus 136 ~----~~~~~~~l~~~i~~ll~~----~~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 136 F----NTMSSTDLLNALKRVIND----PSYKENVMKLSRIQH 169 (170)
T ss_dssp T----TTCCHHHHHHHHHHHHHC----HHHHHHHHHHC----
T ss_pred c----ccCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHhh
Confidence 3 678999999999999998 789999999988754
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.81 E-value=1.7e-17 Score=166.02 Aligned_cols=306 Identities=13% Similarity=0.096 Sum_probs=184.1
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCCCCCchHH
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVNPDASLGE 87 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 87 (498)
|||++++.+..||..+++.|++.|+++ ||+|++++...... ...+.. .++++..++...... .....
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~---~~~~~~----~g~~~~~~~~~~~~~-----~~~~~ 73 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQ-GWQVRWLGTADRME---ADLVPK----HGIEIDFIRISGLRG-----KGIKA 73 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTT-TCEEEEEECTTSTH---HHHGGG----GTCEEEECCCCCCTT-----CCHHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHc-CCEEEEEecCCcch---hhhccc----cCCceEEecCCccCc-----CccHH
Confidence 899999988889999999999999999 99999999865321 011111 156666655322111 11111
Q ss_pred HHH--HHHHHhhHHHHHHHHhcCCCCcEEEeCCCc--hhHHHHHHHhCCcEEEEecchHHHHHHHhhhhhhhhccccccc
Q 041419 88 KIL--VLMHKSLPALRSAISAMKFRPTALIVDFFG--TEAMDVADEFGLLKYMFIASNAWFLACFIHAPAIDKKLLTDEH 163 (498)
Q Consensus 88 ~~~--~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~--~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 163 (498)
.+. .........+..++++. +||+|+++... ..+..+++.+|+|+++.....
T Consensus 74 ~~~~~~~~~~~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~---------------------- 129 (364)
T 1f0k_A 74 LIAAPLRIFNAWRQARAIMKAY--KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG---------------------- 129 (364)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHH--CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhc--CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC----------------------
Confidence 110 01112344567777888 99999998643 344567888999998533110
Q ss_pred CCCCCcccCCCCCCCCcccccccccCCCchhHHHHHHHhhcccCCcEEEEcCccccChHHHHhhhhccccCCCCCCCEEE
Q 041419 164 FNLEKPMELPGCMPVRFQDSLELFLHPNEPIFDFISSIGMKMSLSDGILVNTWDDLEPKTLGSLRDDNLLGRVCKAPVYA 243 (498)
Q Consensus 164 ~~~~~~~~~pg~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~s~~~l~~~~~~~~~~~~~~~r~~~p~v~~ 243 (498)
.++. . .+. ..+..+.+++.+-.. .|++..
T Consensus 130 --------~~~~------------------~----~~~--~~~~~d~v~~~~~~~-------------------~~~~~~ 158 (364)
T 1f0k_A 130 --------IAGL------------------T----NKW--LAKIATKVMQAFPGA-------------------FPNAEV 158 (364)
T ss_dssp --------SCCH------------------H----HHH--HTTTCSEEEESSTTS-------------------SSSCEE
T ss_pred --------CCcH------------------H----HHH--HHHhCCEEEecChhh-------------------cCCceE
Confidence 0000 0 001 112344555432111 123445
Q ss_pred eccCCCCCCCCCCCCCCCCCcchhhHhhhcccCCCCcEEEEEccCCCCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCC
Q 041419 244 IGPLVRSPDVASPSTKTSPSDSRVIILDWLNEQPSQSVIYVSFGSGGTLSAKQMTELAWSLELS--QQRFIWVVRPPVEN 321 (498)
Q Consensus 244 vGpl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~ 321 (498)
+|....... - ..+ ...+.+...+++++|++..|+... ......++++++.. +.++++..+..
T Consensus 159 i~n~v~~~~--------~--~~~-~~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~--- 222 (364)
T 1f0k_A 159 VGNPVRTDV--------L--ALP-LPQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKG--- 222 (364)
T ss_dssp CCCCCCHHH--------H--TSC-CHHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTT---
T ss_pred eCCccchhh--------c--ccc-hhhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCc---
Confidence 553322110 0 000 011111112344567777787743 33444555666554 35555665432
Q ss_pred CCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCcc-HHHHhccCCcceeeecCCcchHHHHHhhCCcEEeccc
Q 041419 322 DVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWAP-QAEILAHPSVGGFLSHCGWNSTVESIVNGVPMIAWPL 400 (498)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p-q~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~ 400 (498)
....+. ....+..-+++.+.+|++ ..+++..++ ++|+++|.+++.||+++|+|+|+.|.
T Consensus 223 -----------------~~~~l~-~~~~~~~~~~v~~~g~~~~~~~~~~~ad--~~v~~sg~~~~~EAma~G~Pvi~~~~ 282 (364)
T 1f0k_A 223 -----------------SQQSVE-QAYAEAGQPQHKVTEFIDDMAAAYAWAD--VVVCRSGALTVSEIAAAGLPALFVPF 282 (364)
T ss_dssp -----------------CHHHHH-HHHHHTTCTTSEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred -----------------hHHHHH-HHHhhcCCCceEEecchhhHHHHHHhCC--EEEECCchHHHHHHHHhCCCEEEeeC
Confidence 111111 111122223688889984 478899998 79999998999999999999999999
Q ss_pred c---ccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHH
Q 041419 401 H---AEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKI 442 (498)
Q Consensus 401 ~---~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~v 442 (498)
. .||..|+..+ .+.|.|..++. .+.+.++++++|.++
T Consensus 283 ~g~~~~q~~~~~~~-~~~g~g~~~~~----~d~~~~~la~~i~~l 322 (364)
T 1f0k_A 283 QHKDRQQYWNALPL-EKAGAAKIIEQ----PQLSVDAVANTLAGW 322 (364)
T ss_dssp CCTTCHHHHHHHHH-HHTTSEEECCG----GGCCHHHHHHHHHTC
T ss_pred CCCchhHHHHHHHH-HhCCcEEEecc----ccCCHHHHHHHHHhc
Confidence 7 7999999998 58899998763 556799999999988
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.53 E-value=1.3e-14 Score=133.50 Aligned_cols=149 Identities=14% Similarity=0.170 Sum_probs=93.7
Q ss_pred CCCcEEEEEccCCCCCCHHHHHH-----HHHHHHhcC-CcEEEEEcCCCCCCCCCcccccccCCCCCcccccCChhh---
Q 041419 277 PSQSVIYVSFGSGGTLSAKQMTE-----LAWSLELSQ-QRFIWVVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGF--- 347 (498)
Q Consensus 277 ~~~~vV~vs~GS~~~~~~~~~~~-----~~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~--- 347 (498)
+++++|||+.||.... .+.+.. ++++|...+ .+++|+++......... +..... +......+|.+.
T Consensus 26 ~~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~-~~~~~~---~~~~~~l~p~~~~~~ 100 (224)
T 2jzc_A 26 IEEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEH-LVQERG---GQRESQKIPIDQFGC 100 (224)
T ss_dssp CCSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCS-HHHHHT---CEECSCCCSSCTTCT
T ss_pred CCCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHH-HHHhhh---ccccccccccccccc
Confidence 4567899999998422 232333 348887777 78999987542100000 000000 000000011000
Q ss_pred ----hh---hcCCCceeecCCccHH-HHhc-cCCcceeeecCCcchHHHHHhhCCcEEecccc----ccchhhHHHHhhh
Q 041419 348 ----LT---RTDKVGLVVPAWAPQA-EILA-HPSVGGFLSHCGWNSTVESIVNGVPMIAWPLH----AEQKMNATMLTEE 414 (498)
Q Consensus 348 ----~~---~~~~~~~~~~~~~pq~-~lL~-~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~----~DQ~~na~~v~~~ 414 (498)
.. ...+-++.+.+|+++. ++|+ .++ ++|||||+||++|++++|+|+|++|.. .||..||+++ ++
T Consensus 101 ~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Ad--lvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l-~~ 177 (224)
T 2jzc_A 101 GDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSD--LVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF-VE 177 (224)
T ss_dssp TCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCS--CEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH-HH
T ss_pred cccccccccccCCceEEEeeccchHHHHHHhcCC--EEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH-HH
Confidence 00 0011245677888775 8899 999 799999999999999999999999984 4699999999 58
Q ss_pred hcceEEeeccCCCCCcCHHHHHHHHHHH
Q 041419 415 IGVAFRSKELPTESLVTRQEIEMLVRKI 442 (498)
Q Consensus 415 ~GvG~~~~~~~~~~~~~~~~l~~al~~v 442 (498)
.|+++.+ +.++|+++|+++
T Consensus 178 ~G~~~~~---------~~~~L~~~i~~l 196 (224)
T 2jzc_A 178 LGYVWSC---------APTETGLIAGLR 196 (224)
T ss_dssp HSCCCEE---------CSCTTTHHHHHH
T ss_pred CCCEEEc---------CHHHHHHHHHHH
Confidence 8998663 346677777776
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.50 E-value=2.1e-12 Score=123.56 Aligned_cols=117 Identities=9% Similarity=0.028 Sum_probs=86.0
Q ss_pred CCcEEEEEccCCCCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCCCCCCcccccccCCCCCcccccCChhhhhhc-CCCce
Q 041419 278 SQSVIYVSFGSGGTLSAKQMTELAWSLELSQQRFIWVVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRT-DKVGL 356 (498)
Q Consensus 278 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~ 356 (498)
..+.|+|++|..... +....++++|.... ++.++.+.... ..+.+.... ..+++
T Consensus 156 ~~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~~----------------------~~~~l~~~~~~~~~v 210 (282)
T 3hbm_A 156 KKYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSNP----------------------NLKKLQKFAKLHNNI 210 (282)
T ss_dssp CCEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTCT----------------------THHHHHHHHHTCSSE
T ss_pred cCCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCch----------------------HHHHHHHHHhhCCCE
Confidence 345799999975332 34456777776644 56666644311 112222221 13478
Q ss_pred eecCCccHH-HHhccCCcceeeecCCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeec
Q 041419 357 VVPAWAPQA-EILAHPSVGGFLSHCGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKE 423 (498)
Q Consensus 357 ~~~~~~pq~-~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~ 423 (498)
.+..|+++. +++..++ ++|++|| +|++|++++|+|+|++|...+|..||+.+ ++.|++..+..
T Consensus 211 ~v~~~~~~m~~~m~~aD--lvI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l-~~~G~~~~~~~ 274 (282)
T 3hbm_A 211 RLFIDHENIAKLMNESN--KLIISAS-SLVNEALLLKANFKAICYVKNQESTATWL-AKKGYEVEYKY 274 (282)
T ss_dssp EEEESCSCHHHHHHTEE--EEEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH-HHTTCEEECGG
T ss_pred EEEeCHHHHHHHHHHCC--EEEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH-HHCCCEEEcch
Confidence 888999876 6888888 7999999 89999999999999999999999999999 59999999864
No 25
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.30 E-value=6.4e-11 Score=118.68 Aligned_cols=78 Identities=14% Similarity=0.180 Sum_probs=59.9
Q ss_pred CceeecCCccH---HHHhccCCcceeeecCCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCCc
Q 041419 354 VGLVVPAWAPQ---AEILAHPSVGGFLSHCGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLV 430 (498)
Q Consensus 354 ~~~~~~~~~pq---~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~ 430 (498)
+++.+.+++++ .+++..++ +||+++| |.+.||+++|+|+|+.+...++... + +.|.|+.++ .
T Consensus 255 ~~v~~~g~~g~~~~~~~~~~ad--~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~---~--~~g~g~lv~-------~ 319 (376)
T 1v4v_A 255 RNFVLLDPLEYGSMAALMRASL--LLVTDSG-GLQEEGAALGVPVVVLRNVTERPEG---L--KAGILKLAG-------T 319 (376)
T ss_dssp TTEEEECCCCHHHHHHHHHTEE--EEEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---H--HHTSEEECC-------S
T ss_pred CCEEEECCCCHHHHHHHHHhCc--EEEECCc-CHHHHHHHcCCCEEeccCCCcchhh---h--cCCceEECC-------C
Confidence 47888755554 58888888 6898884 4456999999999999877776652 2 457887753 3
Q ss_pred CHHHHHHHHHHHhcCC
Q 041419 431 TRQEIEMLVRKIMVDK 446 (498)
Q Consensus 431 ~~~~l~~al~~vl~~~ 446 (498)
+.++|+++|.+++.|+
T Consensus 320 d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 320 DPEGVYRVVKGLLENP 335 (376)
T ss_dssp CHHHHHHHHHHHHTCH
T ss_pred CHHHHHHHHHHHHhCh
Confidence 8899999999999983
No 26
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.20 E-value=5.1e-08 Score=99.11 Aligned_cols=115 Identities=15% Similarity=0.018 Sum_probs=80.0
Q ss_pred CceeecCCccHH---HHhccCCcceeeec----CCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCC
Q 041419 354 VGLVVPAWAPQA---EILAHPSVGGFLSH----CGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPT 426 (498)
Q Consensus 354 ~~~~~~~~~pq~---~lL~~~~~~~~ItH----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~ 426 (498)
+.+.+.+|+|+. +++..+++ +|.- |-.+++.||+++|+|+|+.. .......+ +. |.|..++
T Consensus 311 ~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~----~~~~~e~~-~~-~~g~~~~---- 378 (439)
T 3fro_A 311 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASA----VGGLRDII-TN-ETGILVK---- 378 (439)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEES----STHHHHHC-CT-TTCEEEC----
T ss_pred CEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcC----CCCcceeE-Ec-CceEEeC----
Confidence 466677889886 45777884 5532 33369999999999999864 34455554 33 6888764
Q ss_pred CCCcCHHHHHHHHHHHhc-CCcchHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHhhccc
Q 041419 427 ESLVTRQEIEMLVRKIMV-DKEGHSSIRVRAMELKYGAQKATSNSGSSYKSLSQVAKQCEKSLQE 490 (498)
Q Consensus 427 ~~~~~~~~l~~al~~vl~-~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~ 490 (498)
.-+.++++++|.+++. |++.+.++.+++++.. + .-+-...++++++-+++.+.+
T Consensus 379 --~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~-~-------~~s~~~~~~~~~~~~~~~~~~ 433 (439)
T 3fro_A 379 --AGDPGELANAILKALELSRSDLSKFRENCKKRA-M-------SFSWEKSAERYVKAYTGSIDR 433 (439)
T ss_dssp --TTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH-H-------TSCHHHHHHHHHHHHHTCSCC
T ss_pred --CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-h-------hCcHHHHHHHHHHHHHHHHHh
Confidence 3478999999999998 8766566766666555 2 255566667777776666554
No 27
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.20 E-value=2.3e-09 Score=107.54 Aligned_cols=353 Identities=9% Similarity=-0.013 Sum_probs=180.2
Q ss_pred CCCCCeEEEEcC--C--CccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCC
Q 041419 4 TKLKPHICLLAS--P--GMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLV 79 (498)
Q Consensus 4 ~~~~~~Ill~~~--p--~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 79 (498)
|+.+|||++++. + ..|.-.-+..|++.| + ||+|++++....... . ..... ..++.+..++.... +
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~-g~~v~v~~~~~~~~~-~-~~~~~---~~~~~~~~~~~~~~--~- 69 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--D-PESIVVFASTQNAEE-A-HAYDK---TLDYEVIRWPRSVM--L- 69 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTS--C-GGGEEEEEECSSHHH-H-HHHHT---TCSSEEEEESSSSC--C-
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHh--c-CCeEEEEECCCCccc-h-hhhcc---ccceEEEEcccccc--c-
Confidence 467889999975 3 468888999999999 7 999999998764321 0 01111 12666666553211 0
Q ss_pred CCCCchHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEeCCCch--hHHHHHHHhCCcEEEEecchHHHHHHHhhhhhhhhc
Q 041419 80 NPDASLGEKILVLMHKSLPALRSAISAMKFRPTALIVDFFGT--EAMDVADEFGLLKYMFIASNAWFLACFIHAPAIDKK 157 (498)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~--~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~ 157 (498)
. .. .....+..++++. +||+|++..... ....+++++|+|.+++....... ...
T Consensus 70 ~---~~---------~~~~~l~~~~~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~---~~~------- 125 (394)
T 3okp_A 70 P---TP---------TTAHAMAEIIRER--EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV---GWS------- 125 (394)
T ss_dssp S---CH---------HHHHHHHHHHHHT--TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH---HHT-------
T ss_pred c---ch---------hhHHHHHHHHHhc--CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh---hhh-------
Confidence 0 00 2234566777887 999999765433 33467888999854433221100 000
Q ss_pred ccccccCCCCCcccCCCCCCCCcccccccccCCCchhHHHHHHHhhcccCCcEEEEcCccccChHHHHhhhhccccCCCC
Q 041419 158 LLTDEHFNLEKPMELPGCMPVRFQDSLELFLHPNEPIFDFISSIGMKMSLSDGILVNTWDDLEPKTLGSLRDDNLLGRVC 237 (498)
Q Consensus 158 ~~~~~~~~~~~~~~~pg~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~s~~~l~~~~~~~~~~~~~~~r~~ 237 (498)
. ......+ ........+.+++.|-...+. +... ++ +
T Consensus 126 ~--------------------------------~~~~~~~---~~~~~~~~d~ii~~s~~~~~~-----~~~~--~~-~- 161 (394)
T 3okp_A 126 M--------------------------------LPGSRQS---LRKIGTEVDVLTYISQYTLRR-----FKSA--FG-S- 161 (394)
T ss_dssp T--------------------------------SHHHHHH---HHHHHHHCSEEEESCHHHHHH-----HHHH--HC-S-
T ss_pred h--------------------------------cchhhHH---HHHHHHhCCEEEEcCHHHHHH-----HHHh--cC-C-
Confidence 0 0001111 111234566777665432221 1111 00 0
Q ss_pred CCCEEEeccCCCCCCCCCCCCCCCC--CcchhhHhhhcccCCCCcEEEEEccCCCC-CCHHHHHHHHHHHHhc--CCcEE
Q 041419 238 KAPVYAIGPLVRSPDVASPSTKTSP--SDSRVIILDWLNEQPSQSVIYVSFGSGGT-LSAKQMTELAWSLELS--QQRFI 312 (498)
Q Consensus 238 ~p~v~~vGpl~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~vV~vs~GS~~~-~~~~~~~~~~~al~~~--~~~~i 312 (498)
..++..+..-..... ..+ .....++.+.+.- +++..+++..|+... -..+.+.+++..+.+. +.+++
T Consensus 162 ~~~~~vi~ngv~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~ 233 (394)
T 3okp_A 162 HPTFEHLPSGVDVKR-------FTPATPEDKSATRKKLGF-TDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLL 233 (394)
T ss_dssp SSEEEECCCCBCTTT-------SCCCCHHHHHHHHHHTTC-CTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEE
T ss_pred CCCeEEecCCcCHHH-------cCCCCchhhHHHHHhcCC-CcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEE
Confidence 123555543332211 010 0112333333332 223245666787632 2333333333333332 34443
Q ss_pred EEEcCCCCCCCCCcccccccCCCCCcccccCChhhhhhcC--CCceeecCCccHHH---HhccCCcceeee---------
Q 041419 313 WVVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRTD--KVGLVVPAWAPQAE---ILAHPSVGGFLS--------- 378 (498)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~~~~~~~pq~~---lL~~~~~~~~It--------- 378 (498)
+ ++.... . +.+.+... .+++.+.+|+|+.+ ++..++ ++|.
T Consensus 234 i-~G~g~~-------------------~----~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad--~~v~ps~~~~~~~ 287 (394)
T 3okp_A 234 I-VGSGRY-------------------E----STLRRLATDVSQNVKFLGRLEYQDMINTLAAAD--IFAMPARTRGGGL 287 (394)
T ss_dssp E-ECCCTT-------------------H----HHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCS--EEEECCCCBGGGT
T ss_pred E-EcCchH-------------------H----HHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCC--EEEecCccccccc
Confidence 3 332110 0 11111111 13788889997654 577788 4554
Q ss_pred --cCCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHH
Q 041419 379 --HCGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRA 456 (498)
Q Consensus 379 --HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a 456 (498)
-|..+++.||+++|+|+|+.+.. .....+ +. |.|..++ .-+.+++.++|.+++.|++.+.++.+++
T Consensus 288 ~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~i-~~-~~g~~~~------~~d~~~l~~~i~~l~~~~~~~~~~~~~~ 355 (394)
T 3okp_A 288 DVEGLGIVYLEAQACGVPVIAGTSG----GAPETV-TP-ATGLVVE------GSDVDKLSELLIELLDDPIRRAAMGAAG 355 (394)
T ss_dssp BCCSSCHHHHHHHHTTCCEEECSST----TGGGGC-CT-TTEEECC------TTCHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cccccCcHHHHHHHcCCCEEEeCCC----ChHHHH-hc-CCceEeC------CCCHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 44557899999999999997653 333344 34 4777754 3478999999999999854333444444
Q ss_pred HHHHHHHHHhhccCCchHHHHHHHHHHHHhhc
Q 041419 457 MELKYGAQKATSNSGSSYKSLSQVAKQCEKSL 488 (498)
Q Consensus 457 ~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~ 488 (498)
++... +.-+-...++++.+-+++..
T Consensus 356 ~~~~~-------~~~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 356 RAHVE-------AEWSWEIMGERLTNILQSEP 380 (394)
T ss_dssp HHHHH-------HHTBHHHHHHHHHHHHHSCC
T ss_pred HHHHH-------HhCCHHHHHHHHHHHHHHhc
Confidence 43322 22344455555555555443
No 28
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.19 E-value=1.9e-08 Score=102.68 Aligned_cols=96 Identities=11% Similarity=0.023 Sum_probs=67.3
Q ss_pred CceeecCCccHH---HHhccCCcceeeec----CCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCC
Q 041419 354 VGLVVPAWAPQA---EILAHPSVGGFLSH----CGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPT 426 (498)
Q Consensus 354 ~~~~~~~~~pq~---~lL~~~~~~~~ItH----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~ 426 (498)
+++.+.+++|+. +++..+++ +|.- |..+++.||+++|+|+|+.+. ......+ ++.+.|+.++
T Consensus 306 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~~---- 374 (438)
T 3c48_A 306 KRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAV-AEGETGLLVD---- 374 (438)
T ss_dssp TTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHS-CBTTTEEEES----
T ss_pred CcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHh-hCCCcEEECC----
Confidence 478888999764 66778884 5543 224689999999999999753 4455555 4656787764
Q ss_pred CCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH
Q 041419 427 ESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYG 462 (498)
Q Consensus 427 ~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~ 462 (498)
.-+.++++++|.+++.|++.+.++.+++++....
T Consensus 375 --~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 375 --GHSPHAWADALATLLDDDETRIRMGEDAVEHART 408 (438)
T ss_dssp --SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 3478999999999999855434555555544433
No 29
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.16 E-value=1.4e-09 Score=110.21 Aligned_cols=108 Identities=10% Similarity=0.086 Sum_probs=72.7
Q ss_pred CceeecCCcc---HHHHhccCCcceeeecCCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCCc
Q 041419 354 VGLVVPAWAP---QAEILAHPSVGGFLSHCGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLV 430 (498)
Q Consensus 354 ~~~~~~~~~p---q~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~ 430 (498)
+++.+.++++ ...++..++ ++|+-.| |.+.||.++|+|+|++|-..+++.. + +.|.|+.+. .
T Consensus 282 ~~v~l~~~l~~~~~~~l~~~ad--~vv~~SG-g~~~EA~a~g~PvV~~~~~~~~~e~---v--~~g~~~lv~-------~ 346 (403)
T 3ot5_A 282 ERIHLIEPLDAIDFHNFLRKSY--LVFTDSG-GVQEEAPGMGVPVLVLRDTTERPEG---I--EAGTLKLIG-------T 346 (403)
T ss_dssp TTEEEECCCCHHHHHHHHHHEE--EEEECCH-HHHHHGGGTTCCEEECCSSCSCHHH---H--HHTSEEECC-------S
T ss_pred CCEEEeCCCCHHHHHHHHHhcC--EEEECCc-cHHHHHHHhCCCEEEecCCCcchhh---e--eCCcEEEcC-------C
Confidence 4788878875 457778888 6888775 2336999999999999766666542 3 558777653 2
Q ss_pred CHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHH
Q 041419 431 TRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGAQKATSNSGSSYKSLSQVAKQC 484 (498)
Q Consensus 431 ~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~ 484 (498)
+.++|.+++.+++.| ++.+++ +++.... ..+++++.+-++.+.+.+
T Consensus 347 d~~~l~~ai~~ll~~----~~~~~~---m~~~~~~-~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 347 NKENLIKEALDLLDN----KESHDK---MAQAANP-YGDGFAANRILAAIKSHF 392 (403)
T ss_dssp CHHHHHHHHHHHHHC----HHHHHH---HHHSCCT-TCCSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcC----HHHHHH---HHhhcCc-ccCCcHHHHHHHHHHHHh
Confidence 789999999999998 333332 2222222 355666666555555443
No 30
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.15 E-value=1.2e-08 Score=106.12 Aligned_cols=92 Identities=15% Similarity=0.044 Sum_probs=62.8
Q ss_pred CceeecCCccHH---HHhccC----Ccceeeec---CC-cchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEee
Q 041419 354 VGLVVPAWAPQA---EILAHP----SVGGFLSH---CG-WNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSK 422 (498)
Q Consensus 354 ~~~~~~~~~pq~---~lL~~~----~~~~~ItH---gG-~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~ 422 (498)
+++.+.+++|+. +++..+ + ++|.- -| ..++.||+++|+|+|+... ......+ +....|..++
T Consensus 335 ~~V~~~G~v~~~~~~~~~~~a~~~~d--v~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~~ 407 (499)
T 2r60_A 335 GKVSMFPLNSQQELAGCYAYLASKGS--VFALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLVD 407 (499)
T ss_dssp TTEEEEECCSHHHHHHHHHHHHHTTC--EEEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEEC
T ss_pred ceEEECCCCCHHHHHHHHHhcCcCCC--EEEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEeC
Confidence 368888998765 556677 7 45532 23 3589999999999999753 3445555 4545787764
Q ss_pred ccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHH
Q 041419 423 ELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAME 458 (498)
Q Consensus 423 ~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~ 458 (498)
.-+.++++++|.+++.|++.+.++.+++++
T Consensus 408 ------~~d~~~la~~i~~ll~~~~~~~~~~~~a~~ 437 (499)
T 2r60_A 408 ------PEDPEDIARGLLKAFESEETWSAYQEKGKQ 437 (499)
T ss_dssp ------TTCHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred ------CCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 247899999999999985433344444443
No 31
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.15 E-value=1.1e-09 Score=109.73 Aligned_cols=78 Identities=15% Similarity=0.146 Sum_probs=59.4
Q ss_pred CceeecCCcc---HHHHhccCCcceeeecCCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCCc
Q 041419 354 VGLVVPAWAP---QAEILAHPSVGGFLSHCGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLV 430 (498)
Q Consensus 354 ~~~~~~~~~p---q~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~ 430 (498)
+++.+.++++ ..+++..++ ++|+.+| |++.||+++|+|+|+.+..++... +. +.|.|+.++ .
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad--~~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v-~~g~g~lv~-----~-- 327 (384)
T 1vgv_A 263 KNVILIDPQEYLPFVWLMNHAW--LILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AV-TAGTVRLVG-----T-- 327 (384)
T ss_dssp TTEEEECCCCHHHHHHHHHHCS--EEEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HH-HHTSEEEEC-----S--
T ss_pred CCEEEeCCCCHHHHHHHHHhCc--EEEECCc-chHHHHHHcCCCEEEccCCCCcch----hh-hCCceEEeC-----C--
Confidence 4788856555 457788888 6888875 458899999999999987554433 32 447888764 3
Q ss_pred CHHHHHHHHHHHhcCC
Q 041419 431 TRQEIEMLVRKIMVDK 446 (498)
Q Consensus 431 ~~~~l~~al~~vl~~~ 446 (498)
+.++++++|.+++.|+
T Consensus 328 d~~~la~~i~~ll~d~ 343 (384)
T 1vgv_A 328 DKQRIVEEVTRLLKDE 343 (384)
T ss_dssp SHHHHHHHHHHHHHCH
T ss_pred CHHHHHHHHHHHHhCh
Confidence 8899999999999983
No 32
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.14 E-value=8.9e-10 Score=111.37 Aligned_cols=77 Identities=16% Similarity=0.173 Sum_probs=57.7
Q ss_pred CceeecCCc---cHHHHhccCCcceeeecCCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCCc
Q 041419 354 VGLVVPAWA---PQAEILAHPSVGGFLSHCGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLV 430 (498)
Q Consensus 354 ~~~~~~~~~---pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~ 430 (498)
+++.+.+++ ....++..++ ++|+-.| |.+.||.++|+|+|+..-..+++. .+ +.|.++.++ .
T Consensus 288 ~~v~~~~~lg~~~~~~l~~~ad--~vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e---~v--~~G~~~lv~-------~ 352 (396)
T 3dzc_A 288 SNIVLIEPQQYLPFVYLMDRAH--IILTDSG-GIQEEAPSLGKPVLVMRETTERPE---AV--AAGTVKLVG-------T 352 (396)
T ss_dssp TTEEEECCCCHHHHHHHHHHCS--EEEESCS-GGGTTGGGGTCCEEECCSSCSCHH---HH--HHTSEEECT-------T
T ss_pred CCEEEeCCCCHHHHHHHHHhcC--EEEECCc-cHHHHHHHcCCCEEEccCCCcchH---HH--HcCceEEcC-------C
Confidence 467776666 4557788888 6999887 666799999999999755555432 22 458776543 2
Q ss_pred CHHHHHHHHHHHhcC
Q 041419 431 TRQEIEMLVRKIMVD 445 (498)
Q Consensus 431 ~~~~l~~al~~vl~~ 445 (498)
+.++|.+++.+++.|
T Consensus 353 d~~~l~~ai~~ll~d 367 (396)
T 3dzc_A 353 NQQQICDALSLLLTD 367 (396)
T ss_dssp CHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHcC
Confidence 689999999999998
No 33
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.07 E-value=7.4e-08 Score=96.94 Aligned_cols=115 Identities=13% Similarity=0.054 Sum_probs=75.6
Q ss_pred CceeecCCccHH---HHhccCCcceeee----cCCc-chHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccC
Q 041419 354 VGLVVPAWAPQA---EILAHPSVGGFLS----HCGW-NSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELP 425 (498)
Q Consensus 354 ~~~~~~~~~pq~---~lL~~~~~~~~It----HgG~-gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~ 425 (498)
+++.+.+++++. +++..+++ +|. +.|. +++.||+++|+|+|+.+. ......+ ++.+.|..++
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i-~~~~~g~~~~--- 332 (406)
T 2gek_A 263 GHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVL-ADGDAGRLVP--- 332 (406)
T ss_dssp GGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHH-TTTTSSEECC---
T ss_pred CcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHh-cCCCceEEeC---
Confidence 478999999874 77888885 553 3444 489999999999999755 4555565 4556787764
Q ss_pred CCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHhhcc
Q 041419 426 TESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGAQKATSNSGSSYKSLSQVAKQCEKSLQ 489 (498)
Q Consensus 426 ~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~ 489 (498)
.-+.+++.++|.+++.|++. ++ ++++..++..+ .-+....++++.+-+++.+.
T Consensus 333 ---~~d~~~l~~~i~~l~~~~~~----~~---~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~ 385 (406)
T 2gek_A 333 ---VDDADGMAAALIGILEDDQL----RA---GYVARASERVH-RYDWSVVSAQIMRVYETVSG 385 (406)
T ss_dssp ---TTCHHHHHHHHHHHHHCHHH----HH---HHHHHHHHHGG-GGBHHHHHHHHHHHHHHHCC
T ss_pred ---CCCHHHHHHHHHHHHcCHHH----HH---HHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHh
Confidence 24789999999999998432 22 22222222233 34445555566655555443
No 34
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.00 E-value=2.3e-07 Score=93.27 Aligned_cols=115 Identities=18% Similarity=0.120 Sum_probs=73.2
Q ss_pred ceeecCCccH-HHHhccCCcceee----ecCCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCC
Q 041419 355 GLVVPAWAPQ-AEILAHPSVGGFL----SHCGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESL 429 (498)
Q Consensus 355 ~~~~~~~~pq-~~lL~~~~~~~~I----tHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~ 429 (498)
++.+.++..+ .+++..++ ++| .-|..+++.||+++|+|+|+.+.. .....+ ++.+.|..++ .
T Consensus 268 ~v~~~g~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v-~~~~~g~~~~------~ 334 (394)
T 2jjm_A 268 RVLFLGKQDNVAELLAMSD--LMLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVI-QHGDTGYLCE------V 334 (394)
T ss_dssp GBCCCBSCSCTHHHHHTCS--EEEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTC-CBTTTEEEEC------T
T ss_pred eEEEeCchhhHHHHHHhCC--EEEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHh-hcCCceEEeC------C
Confidence 6776666543 57888888 466 445567899999999999998653 233334 4546777764 2
Q ss_pred cCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHhhcc
Q 041419 430 VTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGAQKATSNSGSSYKSLSQVAKQCEKSLQ 489 (498)
Q Consensus 430 ~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~ 489 (498)
-+.++++++|.+++.|++.+.++.+++++.. .+.-+-...++++.+-+++.+.
T Consensus 335 ~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~-------~~~~s~~~~~~~~~~~~~~~~~ 387 (394)
T 2jjm_A 335 GDTTGVADQAIQLLKDEELHRNMGERARESV-------YEQFRSEKIVSQYETIYYDVLR 387 (394)
T ss_dssp TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-------HHHSCHHHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH-------HHhCCHHHHHHHHHHHHHHHHh
Confidence 4789999999999998543334444444433 1234445555566655555443
No 35
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.93 E-value=1e-06 Score=87.48 Aligned_cols=97 Identities=11% Similarity=0.107 Sum_probs=69.6
Q ss_pred CceeecCCccH-HHHhccCCcceeee----cCCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCC
Q 041419 354 VGLVVPAWAPQ-AEILAHPSVGGFLS----HCGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTES 428 (498)
Q Consensus 354 ~~~~~~~~~pq-~~lL~~~~~~~~It----HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~ 428 (498)
+++.+.++..+ .+++..++ ++|. -|..+++.||+++|+|+|+... ..+...+ ++.+.|..++ .
T Consensus 253 ~~v~~~g~~~~~~~~~~~ad--~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~-----~ 320 (374)
T 2iw1_A 253 SNVHFFSGRNDVSELMAAAD--LLLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYI-ADANCGTVIA-----E 320 (374)
T ss_dssp GGEEEESCCSCHHHHHHHCS--EEEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHH-HHHTCEEEEC-----S
T ss_pred CcEEECCCcccHHHHHHhcC--EEEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhh-ccCCceEEeC-----C
Confidence 36777777543 57788888 4664 4556789999999999999765 3455566 5668888874 2
Q ss_pred CcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH
Q 041419 429 LVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYG 462 (498)
Q Consensus 429 ~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~ 462 (498)
.-+.+++.++|.+++.|++.+.++.+++++..+.
T Consensus 321 ~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 354 (374)
T 2iw1_A 321 PFSQEQLNEVLRKALTQSPLRMAWAENARHYADT 354 (374)
T ss_dssp SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 4588999999999999855445555555555443
No 36
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.90 E-value=1.3e-08 Score=101.57 Aligned_cols=78 Identities=18% Similarity=0.157 Sum_probs=57.2
Q ss_pred CceeecCCccH---HHHhccCCcceeeecCCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCCc
Q 041419 354 VGLVVPAWAPQ---AEILAHPSVGGFLSHCGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLV 430 (498)
Q Consensus 354 ~~~~~~~~~pq---~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~ 430 (498)
+++.+.+++++ ..++..++ ++|+..| +.+.||+++|+|+|+....+..+ ..+ +.|.|+.++ .
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad--~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~---e~v--~~g~g~~v~------~- 327 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSY--LMLTDSG-GVQEEAPSLGVPVLVLRDTTERP---EGI--EAGTLKLAG------T- 327 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCS--EEEECCH-HHHHHHHHHTCCEEECSSCCSCH---HHH--HTTSEEECC------S-
T ss_pred CCEEEeCCCCHHHHHHHHHhCc--EEEECCC-ChHHHHHhcCCCEEEecCCCCCc---eee--cCCceEEcC------C-
Confidence 47888666654 46777888 6888763 56889999999999985433332 223 447887753 2
Q ss_pred CHHHHHHHHHHHhcCC
Q 041419 431 TRQEIEMLVRKIMVDK 446 (498)
Q Consensus 431 ~~~~l~~al~~vl~~~ 446 (498)
+.++++++|.+++.|+
T Consensus 328 d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 328 DEETIFSLADELLSDK 343 (375)
T ss_dssp CHHHHHHHHHHHHHCH
T ss_pred CHHHHHHHHHHHHhCh
Confidence 7899999999999983
No 37
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.86 E-value=6.5e-08 Score=95.27 Aligned_cols=124 Identities=15% Similarity=0.145 Sum_probs=78.8
Q ss_pred EEEccCCCCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCCCCCCcccccccCCCCCcccccCChhhhhhcCCCceeecCCc
Q 041419 283 YVSFGSGGTLSAKQMTELAWSLELSQQRFIWVVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTRTDKVGLVVPAWA 362 (498)
Q Consensus 283 ~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~ 362 (498)
++..|+.. ..+.+..++++++..+.++++ ++.... ...+ ..+..+.. +++.+.+|+
T Consensus 165 i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i-~G~g~~-------------------~~~l-~~~~~~~~-~~v~~~g~~ 220 (342)
T 2iuy_A 165 LLFMGRVS--PHKGALEAAAFAHACGRRLVL-AGPAWE-------------------PEYF-DEITRRYG-STVEPIGEV 220 (342)
T ss_dssp EEEESCCC--GGGTHHHHHHHHHHHTCCEEE-ESCCCC-------------------HHHH-HHHHHHHT-TTEEECCCC
T ss_pred EEEEeccc--cccCHHHHHHHHHhcCcEEEE-EeCccc-------------------HHHH-HHHHHHhC-CCEEEeccC
Confidence 33457654 334566777777777766544 432110 1111 12222333 589999999
Q ss_pred cHH---HHhccCCcceeee-------------cCCc-chHHHHHhhCCcEEeccccccchhhHHHHhhh--hcceEEeec
Q 041419 363 PQA---EILAHPSVGGFLS-------------HCGW-NSTVESIVNGVPMIAWPLHAEQKMNATMLTEE--IGVAFRSKE 423 (498)
Q Consensus 363 pq~---~lL~~~~~~~~It-------------HgG~-gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~--~GvG~~~~~ 423 (498)
++. +++..+++ +|. +-|. +++.||+++|+|+|+... ..+...+ +. .+.|+.+
T Consensus 221 ~~~~l~~~~~~adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~-~~~~~~~g~~~-- 291 (342)
T 2iuy_A 221 GGERRLDLLASAHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIV-PSVGEVVGYGT-- 291 (342)
T ss_dssp CHHHHHHHHHHCSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHG-GGGEEECCSSS--
T ss_pred CHHHHHHHHHhCCE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHh-cccCCCceEEc--
Confidence 876 77888885 552 2343 579999999999999865 3455555 45 4566654
Q ss_pred cCCCCCcCHHHHHHHHHHHhc
Q 041419 424 LPTESLVTRQEIEMLVRKIMV 444 (498)
Q Consensus 424 ~~~~~~~~~~~l~~al~~vl~ 444 (498)
.. +.++++++|.+++.
T Consensus 292 ----~~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 292 ----DF-APDEARRTLAGLPA 307 (342)
T ss_dssp ----CC-CHHHHHHHHHTSCC
T ss_pred ----CC-CHHHHHHHHHHHHH
Confidence 34 89999999999986
No 38
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.72 E-value=1.6e-07 Score=94.22 Aligned_cols=340 Identities=13% Similarity=0.036 Sum_probs=176.3
Q ss_pred EEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCc-ccccccccCCCCCCCeEEEecCCCCCCCCCCCCCchHHHH
Q 041419 11 CLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDD-ASNSNVHAVPNNNNLFNAVTLPLANISSLVNPDASLGEKI 89 (498)
Q Consensus 11 ll~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 89 (498)
+++.+|++-.+.=+-.|-++|+++ ++..++.|....+ ...+.....+ . ++.++.. +-..+.+.
T Consensus 12 ~~~v~GtRpe~~k~~p~~~~l~~~--~~~~~~~tgqh~~~~~~~~~~~~~------~---i~~~~~~-l~~~~~~~---- 75 (385)
T 4hwg_A 12 VMTIVGTRPELIKLCCVISEFDKH--TKHILVHTGQNYAYELNQVFFDDM------G---IRKPDYF-LEVAADNT---- 75 (385)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHHH--SEEEEEECSCHHHHHHTHHHHC-C------C---CCCCSEE-CCCCCCCS----
T ss_pred eeEEEEcCHhHHHHHHHHHHHHhc--CCEEEEEeCCCCChhHHHHHHhhC------C---CCCCcee-cCCCCCCH----
Confidence 455678888888888899999875 8888887765322 1111111211 1 1111111 10111222
Q ss_pred HHHHHHhhHHHHHHHHhcCCCCcEEEe--CCCchhHHHHHHHhCCcEEEEecchHHHHHHHhhhhhhhhcccccccCCCC
Q 041419 90 LVLMHKSLPALRSAISAMKFRPTALIV--DFFGTEAMDVADEFGLLKYMFIASNAWFLACFIHAPAIDKKLLTDEHFNLE 167 (498)
Q Consensus 90 ~~~~~~~~~~l~~~l~~~~~~pD~vI~--D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 167 (498)
...+......+.++++++ +||+||+ |....++..+|.++|||++.+...
T Consensus 76 ~~~~~~~~~~l~~~l~~~--kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag--------------------------- 126 (385)
T 4hwg_A 76 AKSIGLVIEKVDEVLEKE--KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG--------------------------- 126 (385)
T ss_dssp HHHHHHHHHHHHHHHHHH--CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC---------------------------
T ss_pred HHHHHHHHHHHHHHHHhc--CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC---------------------------
Confidence 334455677888999999 9999885 344445578899999997643210
Q ss_pred CcccCCCCCCCCcccccccccCCCchhHHHHHHHhhcccCCcEEEEcCccccChHHHHhhhhccccCCCCCC--CEEEec
Q 041419 168 KPMELPGCMPVRFQDSLELFLHPNEPIFDFISSIGMKMSLSDGILVNTWDDLEPKTLGSLRDDNLLGRVCKA--PVYAIG 245 (498)
Q Consensus 168 ~~~~~pg~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~s~~~l~~~~~~~~~~~~~~~r~~~p--~v~~vG 245 (498)
+... . ..+..+.+......+ .+.+++.+-... ..+... + .+ +++.+|
T Consensus 127 -------lrs~---------~--~~~pee~nR~~~~~~--a~~~~~~te~~~-----~~l~~~---G---~~~~~I~vtG 175 (385)
T 4hwg_A 127 -------NRCF---------D--QRVPEEINRKIIDHI--SDVNITLTEHAR-----RYLIAE---G---LPAELTFKSG 175 (385)
T ss_dssp -------CCCS---------C--TTSTHHHHHHHHHHH--CSEEEESSHHHH-----HHHHHT---T---CCGGGEEECC
T ss_pred -------Cccc---------c--ccCcHHHHHHHHHhh--hceeecCCHHHH-----HHHHHc---C---CCcCcEEEEC
Confidence 0000 0 000001101111111 233344332211 111111 1 22 388888
Q ss_pred cCCCCCCCCCCCCCCCCC---cchhhHhhhcccCCCCcEEEEEccCCCCCCH-HHHHHHHHHHHhc----CCcEEEEEcC
Q 041419 246 PLVRSPDVASPSTKTSPS---DSRVIILDWLNEQPSQSVIYVSFGSGGTLSA-KQMTELAWSLELS----QQRFIWVVRP 317 (498)
Q Consensus 246 pl~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~-~~~~~~~~al~~~----~~~~i~~~~~ 317 (498)
-...+.. ... ....++.+.+.- +++++|++++|....... +.+..+++++... +..+++...+
T Consensus 176 np~~D~~--------~~~~~~~~~~~~~~~lgl-~~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p 246 (385)
T 4hwg_A 176 SHMPEVL--------DRFMPKILKSDILDKLSL-TPKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHP 246 (385)
T ss_dssp CSHHHHH--------HHHHHHHHHCCHHHHTTC-CTTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECH
T ss_pred CchHHHH--------HHhhhhcchhHHHHHcCC-CcCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECCh
Confidence 4322211 000 001223333332 235688888876644432 4455666766543 5667775531
Q ss_pred CCCCCCCCcccccccCCCCCcccccCChhhhhh---c-CCCceeecCCc---cHHHHhccCCcceeeecCCcchHHHHHh
Q 041419 318 PVENDVSGSYLTVVDNNSAGKLEDYLPHGFLTR---T-DKVGLVVPAWA---PQAEILAHPSVGGFLSHCGWNSTVESIV 390 (498)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~---~-~~~~~~~~~~~---pq~~lL~~~~~~~~ItHgG~gs~~eal~ 390 (498)
.. . +.+.+. . ..+++.+.+.+ +...++.+++ ++|+-.|. .+.||.+
T Consensus 247 ~~---------------------~---~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~ad--lvvt~SGg-v~~EA~a 299 (385)
T 4hwg_A 247 RT---------------------K---KRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAF--CILSDSGT-ITEEASI 299 (385)
T ss_dssp HH---------------------H---HHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCS--EEEECCTT-HHHHHHH
T ss_pred HH---------------------H---HHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCc--EEEECCcc-HHHHHHH
Confidence 10 0 001110 1 12367765544 4567888888 78988775 4689999
Q ss_pred hCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhh-cc
Q 041419 391 NGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGAQKAT-SN 469 (498)
Q Consensus 391 ~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~~~a~-~~ 469 (498)
+|+|+|+++...+.+. .+ +.|.++.+. .+.++|.+++.+++.|++....+++++.. . .+
T Consensus 300 lG~Pvv~~~~~ter~e---~v--~~G~~~lv~-------~d~~~i~~ai~~ll~d~~~~~~m~~~~~~--------~~g~ 359 (385)
T 4hwg_A 300 LNLPALNIREAHERPE---GM--DAGTLIMSG-------FKAERVLQAVKTITEEHDNNKRTQGLVPD--------YNEA 359 (385)
T ss_dssp TTCCEEECSSSCSCTH---HH--HHTCCEECC-------SSHHHHHHHHHHHHTTCBTTBCCSCCCHH--------HHTC
T ss_pred cCCCEEEcCCCccchh---hh--hcCceEEcC-------CCHHHHHHHHHHHHhChHHHHHhhccCCC--------CCCC
Confidence 9999999987554222 23 458776642 37899999999999986532233322221 3 45
Q ss_pred CCchHHHHHHHHH
Q 041419 470 SGSSYKSLSQVAK 482 (498)
Q Consensus 470 ~g~~~~~~~~~~~ 482 (498)
|+++.+-++.+.+
T Consensus 360 g~aa~rI~~~l~~ 372 (385)
T 4hwg_A 360 GLVSKKILRIVLS 372 (385)
T ss_dssp CCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHH
Confidence 6666665554443
No 39
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.71 E-value=6.2e-07 Score=90.70 Aligned_cols=90 Identities=13% Similarity=0.037 Sum_probs=61.6
Q ss_pred CceeecCCcc------HHHHhccCCcceeeecC----CcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeec
Q 041419 354 VGLVVPAWAP------QAEILAHPSVGGFLSHC----GWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKE 423 (498)
Q Consensus 354 ~~~~~~~~~p------q~~lL~~~~~~~~ItHg----G~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~ 423 (498)
+++.+.+|++ -.+++..++ ++|.-. ..+++.||+++|+|+|+.+. ..+...+ +..+.|..+
T Consensus 293 ~~V~~~G~~~~~~~~~~~~~~~~ad--~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~-- 363 (416)
T 2x6q_A 293 YDVKVLTNLIGVHAREVNAFQRASD--VILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLV-- 363 (416)
T ss_dssp TTEEEEEGGGTCCHHHHHHHHHHCS--EEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEE--
T ss_pred CcEEEecccCCCCHHHHHHHHHhCC--EEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEE--
Confidence 4788878765 245677788 466543 34689999999999999754 3455555 455677764
Q ss_pred cCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHH
Q 041419 424 LPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAME 458 (498)
Q Consensus 424 ~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~ 458 (498)
. +.++++++|.+++.|++.+.++.+++++
T Consensus 364 ----~--d~~~la~~i~~ll~~~~~~~~~~~~a~~ 392 (416)
T 2x6q_A 364 ----R--DANEAVEVVLYLLKHPEVSKEMGAKAKE 392 (416)
T ss_dssp ----S--SHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred ----C--CHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 3 7899999999999984432333444433
No 40
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.43 E-value=0.00016 Score=76.14 Aligned_cols=123 Identities=11% Similarity=0.105 Sum_probs=77.6
Q ss_pred CceeecCCccHH---HHhccCCcceeee---cCCcchHHHHHhhCCcEEeccccccchhh-HHHHhhhhcceEEeeccCC
Q 041419 354 VGLVVPAWAPQA---EILAHPSVGGFLS---HCGWNSTVESIVNGVPMIAWPLHAEQKMN-ATMLTEEIGVAFRSKELPT 426 (498)
Q Consensus 354 ~~~~~~~~~pq~---~lL~~~~~~~~It---HgG~gs~~eal~~GvP~v~~P~~~DQ~~n-a~~v~~~~GvG~~~~~~~~ 426 (498)
+++.+.+++|+. .++..+++ ||. .|+.+++.||+++|+|+|++|-..=.... +..+ +..|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhhc----
Confidence 478888999754 56777884 552 25667899999999999998763211112 2333 4556654442
Q ss_pred CCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHhhccce
Q 041419 427 ESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGAQKATSNSGSSYKSLSQVAKQCEKSLQEL 491 (498)
Q Consensus 427 ~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~ 491 (498)
. +.+++.+++.+++.|++.+.++++++++.... .+..+....++.+.+-+++.+++.
T Consensus 507 -~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-----~~~f~~~~~~~~~~~~y~~~~~~~ 563 (568)
T 2vsy_A 507 -A--DDAAFVAKAVALASDPAALTALHARVDVLRRA-----SGVFHMDGFADDFGALLQALARRH 563 (568)
T ss_dssp -S--SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-----SSTTCHHHHHHHHHHHHHHHHHTT
T ss_pred -C--CHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhc-----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2 88999999999999854333344443332211 345566666666666666655544
No 41
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.35 E-value=4e-05 Score=83.54 Aligned_cols=94 Identities=12% Similarity=0.063 Sum_probs=62.0
Q ss_pred CceeecC----CccHHHHhc----cCCcceeeec----CCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEe
Q 041419 354 VGLVVPA----WAPQAEILA----HPSVGGFLSH----CGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRS 421 (498)
Q Consensus 354 ~~~~~~~----~~pq~~lL~----~~~~~~~ItH----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~ 421 (498)
+++.+.+ ++|+.++.. .++ +||.- |-..++.||+++|+|+|+- |-......+ +....|+.+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaD--vfV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV-~dg~~Gllv 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEII-VHGKSGFHI 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTC--EEEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHC-CBTTTBEEE
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCe--EEEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHH-ccCCcEEEe
Confidence 4677766 445555554 345 46633 2336899999999999996 445555555 465678877
Q ss_pred eccCCCCCcCHHHHHHHHHHHh----cCCcchHHHHHHHHHHH
Q 041419 422 KELPTESLVTRQEIEMLVRKIM----VDKEGHSSIRVRAMELK 460 (498)
Q Consensus 422 ~~~~~~~~~~~~~l~~al~~vl----~~~~~~~~~~~~a~~l~ 460 (498)
+ .-+.++++++|.+++ .|++.+.++.+++++..
T Consensus 713 ~------p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a 749 (816)
T 3s28_A 713 D------PYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRI 749 (816)
T ss_dssp C------TTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred C------CCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 5 247888999997766 78665455666655544
No 42
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.05 E-value=0.00051 Score=70.60 Aligned_cols=79 Identities=9% Similarity=-0.029 Sum_probs=54.5
Q ss_pred Ccee-ecCCccH--HHHhccCCcceeeec----CCcchHHHHHhhCCcEEeccccccchhhHHHHhhhh---------cc
Q 041419 354 VGLV-VPAWAPQ--AEILAHPSVGGFLSH----CGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEI---------GV 417 (498)
Q Consensus 354 ~~~~-~~~~~pq--~~lL~~~~~~~~ItH----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~---------Gv 417 (498)
+++. +.++... ..++..+++ +|.- |-..++.||+++|+|+|+... ......+ +.. +.
T Consensus 346 ~~v~~~~g~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~ 418 (485)
T 1rzu_A 346 GRVGVAIGYNEPLSHLMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAAT 418 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCC
T ss_pred CcEEEecCCCHHHHHHHHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCc
Confidence 3675 5677333 257888884 5532 334689999999999999754 3444444 343 57
Q ss_pred eEEeeccCCCCCcCHHHHHHHHHHHh---cC
Q 041419 418 AFRSKELPTESLVTRQEIEMLVRKIM---VD 445 (498)
Q Consensus 418 G~~~~~~~~~~~~~~~~l~~al~~vl---~~ 445 (498)
|..++ .-+.++++++|.+++ .|
T Consensus 419 G~l~~------~~d~~~la~~i~~ll~~~~~ 443 (485)
T 1rzu_A 419 GVQFS------PVTLDGLKQAIRRTVRYYHD 443 (485)
T ss_dssp BEEES------SCSHHHHHHHHHHHHHHHTC
T ss_pred ceEeC------CCCHHHHHHHHHHHHHHhCC
Confidence 77764 347899999999999 67
No 43
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.00 E-value=6.2e-05 Score=66.35 Aligned_cols=81 Identities=11% Similarity=0.114 Sum_probs=60.5
Q ss_pred CceeecCCccH---HHHhccCCcceeee---cCCc-chHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCC
Q 041419 354 VGLVVPAWAPQ---AEILAHPSVGGFLS---HCGW-NSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPT 426 (498)
Q Consensus 354 ~~~~~~~~~pq---~~lL~~~~~~~~It---HgG~-gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~ 426 (498)
+++.+.+|+++ ..++..+++ +|. +.|+ .++.||+++|+|+|+... ..+...+ ++.+.|..+ .
T Consensus 78 ~~v~~~g~~~~~e~~~~~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~-~--- 146 (177)
T 2f9f_A 78 DNVKFLGSVSEEELIDLYSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV-N--- 146 (177)
T ss_dssp TTEEEEESCCHHHHHHHHHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE-C---
T ss_pred CcEEEeCCCCHHHHHHHHHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe-C---
Confidence 37888899997 577888884 554 3444 499999999999999743 4555555 455677765 2
Q ss_pred CCCcCHHHHHHHHHHHhcCCcc
Q 041419 427 ESLVTRQEIEMLVRKIMVDKEG 448 (498)
Q Consensus 427 ~~~~~~~~l~~al~~vl~~~~~ 448 (498)
-+.++++++|.+++.|++.
T Consensus 147 ---~d~~~l~~~i~~l~~~~~~ 165 (177)
T 2f9f_A 147 ---ADVNEIIDAMKKVSKNPDK 165 (177)
T ss_dssp ---SCHHHHHHHHHHHHHCTTT
T ss_pred ---CCHHHHHHHHHHHHhCHHH
Confidence 3679999999999988653
No 44
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=97.99 E-value=0.0022 Score=65.73 Aligned_cols=80 Identities=9% Similarity=-0.016 Sum_probs=54.6
Q ss_pred Ccee-ecCCccH--HHHhccCCcceeeec----CCcchHHHHHhhCCcEEeccccccchhhHHHHhhhh---------cc
Q 041419 354 VGLV-VPAWAPQ--AEILAHPSVGGFLSH----CGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEI---------GV 417 (498)
Q Consensus 354 ~~~~-~~~~~pq--~~lL~~~~~~~~ItH----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~---------Gv 417 (498)
+++. +.++.+. ..++..+++ +|.- |-..++.||+++|+|+|+... ..+...+ +.. +.
T Consensus 347 ~~v~~~~g~~~~~~~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~ 419 (485)
T 2qzs_A 347 GQVGVQIGYHEAFSHRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVAS 419 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCC
T ss_pred CcEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccc
Confidence 3664 6677433 267888884 5532 334678899999999999754 3444444 343 57
Q ss_pred eEEeeccCCCCCcCHHHHHHHHHHHh---cCC
Q 041419 418 AFRSKELPTESLVTRQEIEMLVRKIM---VDK 446 (498)
Q Consensus 418 G~~~~~~~~~~~~~~~~l~~al~~vl---~~~ 446 (498)
|..++ .-+.++++++|.+++ .|+
T Consensus 420 G~l~~------~~d~~~la~~i~~ll~~~~~~ 445 (485)
T 2qzs_A 420 GFVFE------DSNAWSLLRAIRRAFVLWSRP 445 (485)
T ss_dssp BEEEC------SSSHHHHHHHHHHHHHHHTSH
T ss_pred eEEEC------CCCHHHHHHHHHHHHHHcCCH
Confidence 87764 347899999999999 663
No 45
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.96 E-value=0.0023 Score=64.11 Aligned_cols=112 Identities=11% Similarity=0.062 Sum_probs=67.6
Q ss_pred eeecCCccHH---HHhccCCcceeee----cCCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcc-----------
Q 041419 356 LVVPAWAPQA---EILAHPSVGGFLS----HCGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGV----------- 417 (498)
Q Consensus 356 ~~~~~~~pq~---~lL~~~~~~~~It----HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~Gv----------- 417 (498)
+.+.+|+|+. +++..+++ +|. -|...++.||+++|+|+|+... ......+ +. |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~-~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYF-SG-DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHS-CT-TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHH-cc-Ccccccccccccc
Confidence 6667899854 56677884 553 2223589999999999999643 3344443 22 22
Q ss_pred -----eE--EeeccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHhhcc
Q 041419 418 -----AF--RSKELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGAQKATSNSGSSYKSLSQVAKQCEKSLQ 489 (498)
Q Consensus 418 -----G~--~~~~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~ 489 (498)
|+ .++ .-+.++++++| +++.|++ .+ +++++.+++.+.+.-+-...++++.+-+++.+.
T Consensus 328 ~~~~~G~~gl~~------~~d~~~la~~i-~l~~~~~----~~---~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~ 392 (413)
T 3oy2_A 328 VDDRDGIGGIEG------IIDVDDLVEAF-TFFKDEK----NR---KEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLR 392 (413)
T ss_dssp CTTTCSSCCEEE------ECCHHHHHHHH-HHTTSHH----HH---HHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC
T ss_pred cccccCcceeeC------CCCHHHHHHHH-HHhcCHH----HH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 33 433 23889999999 9999843 22 223333333233445656666666666665544
No 46
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=97.84 E-value=0.0023 Score=64.28 Aligned_cols=74 Identities=8% Similarity=-0.037 Sum_probs=54.9
Q ss_pred ceeecCCccHH---HHhccCCcceeee---cCCc-chHHHHH-------hhCCcEEeccccccchhhHHHHhhhhcceEE
Q 041419 355 GLVVPAWAPQA---EILAHPSVGGFLS---HCGW-NSTVESI-------VNGVPMIAWPLHAEQKMNATMLTEEIGVAFR 420 (498)
Q Consensus 355 ~~~~~~~~pq~---~lL~~~~~~~~It---HgG~-gs~~eal-------~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~ 420 (498)
++.+.+++|+. +++..+++ +|. +-|. +++.||+ ++|+|+|+... + +.-..|..
T Consensus 266 ~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G~l 332 (406)
T 2hy7_A 266 NVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKSRF 332 (406)
T ss_dssp TEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSSEE
T ss_pred CEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcceEE
Confidence 78888999865 46777884 443 3344 5788999 99999999755 4 34455766
Q ss_pred -eeccCCCCCcCHHHHHHHHHHHhcCCc
Q 041419 421 -SKELPTESLVTRQEIEMLVRKIMVDKE 447 (498)
Q Consensus 421 -~~~~~~~~~~~~~~l~~al~~vl~~~~ 447 (498)
++ .-+.++++++|.+++.|++
T Consensus 333 ~v~------~~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 333 GYT------PGNADSVIAAITQALEAPR 354 (406)
T ss_dssp EEC------TTCHHHHHHHHHHHHHCCC
T ss_pred EeC------CCCHHHHHHHHHHHHhCcc
Confidence 54 2478999999999998753
No 47
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.21 E-value=0.0026 Score=54.71 Aligned_cols=91 Identities=11% Similarity=0.093 Sum_probs=59.0
Q ss_pred ceeecCCccHH---HHhccCCcceeee----cCCcchHHHHHhhCC-cEEeccccccchhhHHHHhhhhcceEEeeccCC
Q 041419 355 GLVVPAWAPQA---EILAHPSVGGFLS----HCGWNSTVESIVNGV-PMIAWPLHAEQKMNATMLTEEIGVAFRSKELPT 426 (498)
Q Consensus 355 ~~~~~~~~pq~---~lL~~~~~~~~It----HgG~gs~~eal~~Gv-P~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~ 426 (498)
++.+ +|+|+. +++..+++ +|. -|...++.||+++|+ |+|+.... ......+ +..+. .+
T Consensus 57 ~v~~-g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~---~~~~~~~-~~~~~--~~----- 122 (166)
T 3qhp_A 57 KAEF-GFVNSNELLEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPL---SATRQFA-LDERS--LF----- 122 (166)
T ss_dssp EEEC-CCCCHHHHHHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTT---CGGGGGC-SSGGG--EE-----
T ss_pred eEEE-eecCHHHHHHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCC---Cchhhhc-cCCce--EE-----
Confidence 6778 999865 56777774 554 233469999999996 99994322 2222222 23233 22
Q ss_pred CCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Q 041419 427 ESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELK 460 (498)
Q Consensus 427 ~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~ 460 (498)
..-+.+++.++|.+++.|++.+.++.+++++..
T Consensus 123 -~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~ 155 (166)
T 3qhp_A 123 -EPNNAKDLSAKIDWWLENKLERERMQNEYAKSA 155 (166)
T ss_dssp -CTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred -cCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 234789999999999998655456666666544
No 48
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.05 E-value=0.008 Score=65.00 Aligned_cols=145 Identities=19% Similarity=0.237 Sum_probs=89.8
Q ss_pred CCCcEEEEEccCCCCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCCCCCCcccccccCCCCCcccccCChhhhh-hcCCCc
Q 041419 277 PSQSVIYVSFGSGGTLSAKQMTELAWSLELSQQRFIWVVRPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFLT-RTDKVG 355 (498)
Q Consensus 277 ~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~~~~ 355 (498)
++..+||.+|....-.+++.+..-.+.|++.+..++|.+...... ...+-..+.. .+....
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~------------------~~~l~~~~~~~gi~~~r 581 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG------------------EPNIQQYAQNMGLPQNR 581 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG------------------HHHHHHHHHHTTCCGGG
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH------------------HHHHHHHHHhcCCCcCe
Confidence 345689999988888899999999999999999999988654210 0111111111 122335
Q ss_pred eeecCCccHHHHh---ccCCcceeee---cCCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCC
Q 041419 356 LVVPAWAPQAEIL---AHPSVGGFLS---HCGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESL 429 (498)
Q Consensus 356 ~~~~~~~pq~~lL---~~~~~~~~It---HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~ 429 (498)
+++.+..|..+-| ..++ +++. .+|.+|+.|||..|||+|.++-..=--..+.-+-...|+.-.+.
T Consensus 582 ~~f~~~~~~~~~l~~~~~~D--i~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia------- 652 (723)
T 4gyw_A 582 IIFSPVAPKEEHVRRGQLAD--VCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIA------- 652 (723)
T ss_dssp EEEEECCCHHHHHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBC-------
T ss_pred EEECCCCCHHHHHHHhCCCe--EEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCccccc-------
Confidence 7777777766544 4455 5654 88999999999999999999852211112222213555543321
Q ss_pred cCHHHHHHHHHHHhcCCcc
Q 041419 430 VTRQEIEMLVRKIMVDKEG 448 (498)
Q Consensus 430 ~~~~~l~~al~~vl~~~~~ 448 (498)
-+.++-.+..-++-+|++.
T Consensus 653 ~~~~~Y~~~a~~la~d~~~ 671 (723)
T 4gyw_A 653 KNRQEYEDIAVKLGTDLEY 671 (723)
T ss_dssp SSHHHHHHHHHHHHHCHHH
T ss_pred CCHHHHHHHHHHHhcCHHH
Confidence 2455544444466667433
No 49
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=96.97 E-value=0.014 Score=51.73 Aligned_cols=91 Identities=12% Similarity=0.057 Sum_probs=62.3
Q ss_pred ceee-cCCccHH---HHhccCCcceeeecC---C-cchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCC
Q 041419 355 GLVV-PAWAPQA---EILAHPSVGGFLSHC---G-WNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPT 426 (498)
Q Consensus 355 ~~~~-~~~~pq~---~lL~~~~~~~~ItHg---G-~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~ 426 (498)
++.+ .+++++. .++..+++ +|... | ..++.||+++|+|+|+... ..+...+ ..+.|..++
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~--~~~~g~~~~---- 163 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII--TNETGILVK---- 163 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC--CTTTCEEEC----
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc--CCCceEEec----
Confidence 6888 8999854 66777884 55322 3 3688999999999998754 3333333 345677654
Q ss_pred CCCcCHHHHHHHHHHHhc-CCcchHHHHHHHHHH
Q 041419 427 ESLVTRQEIEMLVRKIMV-DKEGHSSIRVRAMEL 459 (498)
Q Consensus 427 ~~~~~~~~l~~al~~vl~-~~~~~~~~~~~a~~l 459 (498)
.-+.+++.++|.+++. |++.+.++.+++++.
T Consensus 164 --~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~ 195 (200)
T 2bfw_A 164 --AGDPGELANAILKALELSRSDLSKFRENCKKR 195 (200)
T ss_dssp --TTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 2478999999999999 855434555555443
No 50
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=96.88 E-value=0.0072 Score=63.15 Aligned_cols=146 Identities=8% Similarity=0.033 Sum_probs=90.4
Q ss_pred cEEEEEccCCCCCCHHHHHHHHHHHHhcCCcEEEEE--cCCCCCCCCCcccccccCCCCCcccccCChhhh-hhcCCCce
Q 041419 280 SVIYVSFGSGGTLSAKQMTELAWSLELSQQRFIWVV--RPPVENDVSGSYLTVVDNNSAGKLEDYLPHGFL-TRTDKVGL 356 (498)
Q Consensus 280 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~~~~~ 356 (498)
.++|.+|+......++.+....+.+++.+..++|.. +...+ ....+-..+. ..+. +.+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g------------------~~~~~~~~~~~~GI~-~Rv 501 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNG------------------ITHPYVERFIKSYLG-DSA 501 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCG------------------GGHHHHHHHHHHHHG-GGE
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCch------------------hhHHHHHHHHHcCCC-ccE
Confidence 588999998877888888888888988888888753 21111 0011101111 1122 256
Q ss_pred eecCCccHHHHh---ccCCcceeee---cCCcchHHHHHhhCCcEEeccccccchhhHHHHh----hhhcceEE-eeccC
Q 041419 357 VVPAWAPQAEIL---AHPSVGGFLS---HCGWNSTVESIVNGVPMIAWPLHAEQKMNATMLT----EEIGVAFR-SKELP 425 (498)
Q Consensus 357 ~~~~~~pq~~lL---~~~~~~~~It---HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~----~~~GvG~~-~~~~~ 425 (498)
++.+.+|+.+.+ ..+++ ++. .+|..|+.||+.+|||+|..+-.. .+.|++ ...|+.-. +.
T Consensus 502 ~F~g~~p~~e~la~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~----~asRvgaSlL~~~GLpE~LIA--- 572 (631)
T 3q3e_A 502 TAHPHSPYHQYLRILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAE----VHEHIDEGLFKRLGLPEWLIA--- 572 (631)
T ss_dssp EEECCCCHHHHHHHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSS----HHHHHHHHHHHHTTCCGGGEE---
T ss_pred EEcCCCCHHHHHHHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCc----HHHHhHHHHHHhcCCCcceec---
Confidence 777888876554 66774 432 378899999999999999987532 222321 23454431 21
Q ss_pred CCCCcCHHHHHHHHHHHhcCCcchHHHHHHHH
Q 041419 426 TESLVTRQEIEMLVRKIMVDKEGHSSIRVRAM 457 (498)
Q Consensus 426 ~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~ 457 (498)
-+.++..+...++.+|++.+.++|++++
T Consensus 573 ----~d~eeYv~~Av~La~D~~~l~~LR~~Lr 600 (631)
T 3q3e_A 573 ----NTVDEYVERAVRLAENHQERLELRRYII 600 (631)
T ss_dssp ----SSHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3578888888888888544344444333
No 51
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.72 E-value=0.35 Score=47.12 Aligned_cols=107 Identities=11% Similarity=-0.024 Sum_probs=70.6
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCC-CCEEEEEEcCCCCcccccccccCCCCCCCeE-EEecCCCCCCCCCCCC
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHH-DVQVTVFVVASHDDASNSNVHAVPNNNNLFN-AVTLPLANISSLVNPD 82 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~ 82 (498)
-..++|+++-....||+.=...+.+.|+++. +.+|++++.+.+.+ .++..| .++ ++.++..
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~-----l~~~~p---~vd~vi~~~~~--------- 68 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQ-----VMEYNP---NIDELIVVDKK--------- 68 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGG-----GTSSCT---TCSEEEEECCS---------
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhH-----HHhcCC---CccEEEEeCcc---------
Confidence 4568999999999999999999999999875 88999999987443 344444 443 4443310
Q ss_pred CchHHHHHHHHHHhhHHHHHHHHhcCCCC-cEEEeCCCchhHHHHHHHhCCcEEE
Q 041419 83 ASLGEKILVLMHKSLPALRSAISAMKFRP-TALIVDFFGTEAMDVADEFGLLKYM 136 (498)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~p-D~vI~D~~~~~a~~~A~~lgiP~v~ 136 (498)
.....+.. .-.+...+++. ++ |++|.=....-...++...|+|..+
T Consensus 69 -~~~~~~~~-----~~~l~~~Lr~~--~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 -GRHNSISG-----LNEVAREINAK--GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp -SHHHHHHH-----HHHHHHHHHHH--CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred -cccccHHH-----HHHHHHHHhhC--CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 11111111 11233334444 89 9999655555556778888999754
No 52
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=96.56 E-value=0.0044 Score=61.50 Aligned_cols=97 Identities=14% Similarity=0.208 Sum_probs=69.4
Q ss_pred ceeecCCc-cHHHHhccCCcceeee--c--CCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCC
Q 041419 355 GLVVPAWA-PQAEILAHPSVGGFLS--H--CGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESL 429 (498)
Q Consensus 355 ~~~~~~~~-pq~~lL~~~~~~~~It--H--gG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~ 429 (498)
++.+.++. .-..++..+++ +|+. . +|..++.||+++|+|+|+-|...+.......+ .+.|.++..
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv-~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~-~~~G~l~~~-------- 330 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI-AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL-EKEGAGFEV-------- 330 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE-EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH-HHTTCEEEC--------
T ss_pred cEEEECCHHHHHHHHHhCCE-EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH-HHCCCEEEe--------
Confidence 35554543 34577888884 2331 1 23478999999999999877777777666655 355766553
Q ss_pred cCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH
Q 041419 430 VTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYG 462 (498)
Q Consensus 430 ~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~ 462 (498)
-+.++++++|.+++.| +.+.++.+++++..+.
T Consensus 331 ~d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 331 KNETELVTKLTELLSV-KKEIKVEEKSREIKGC 362 (374)
T ss_dssp CSHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHh
Confidence 2679999999999998 7768898888887665
No 53
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.30 E-value=0.0063 Score=59.46 Aligned_cols=108 Identities=14% Similarity=0.144 Sum_probs=74.4
Q ss_pred ceeecCCccHHHHh---ccCCcceeeecCCc---------chHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEee
Q 041419 355 GLVVPAWAPQAEIL---AHPSVGGFLSHCGW---------NSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSK 422 (498)
Q Consensus 355 ~~~~~~~~pq~~lL---~~~~~~~~ItHgG~---------gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~ 422 (498)
|+.+.+|+|+.++. ..++.+++.+-+-. +-+.|++++|+|+|+.+ ...++..+ ++.|+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEeC
Confidence 79999999998764 34455444422222 34789999999999854 45677777 6889999864
Q ss_pred ccCCCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhhccCCchHHHHHHHH
Q 041419 423 ELPTESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGAQKATSNSGSSYKSLSQVA 481 (498)
Q Consensus 423 ~~~~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~ 481 (498)
+.+++.+++.++. ++++ .++++|+++.++.++ .+.-....+.+.+
T Consensus 290 --------~~~e~~~~i~~l~-~~~~-~~m~~na~~~a~~~~----~~~f~k~~l~~~~ 334 (339)
T 3rhz_A 290 --------DVEEAIMKVKNVN-EDEY-IELVKNVRSFNPILR----KGFFTRRLLTESV 334 (339)
T ss_dssp --------SHHHHHHHHHHCC-HHHH-HHHHHHHHHHTHHHH----TTHHHHHHHHHHH
T ss_pred --------CHHHHHHHHHHhC-HHHH-HHHHHHHHHHHHHhh----ccHHHHHHHHHHH
Confidence 3578888888764 3344 889999999888744 3444444444433
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.20 E-value=0.29 Score=47.40 Aligned_cols=103 Identities=17% Similarity=0.064 Sum_probs=64.1
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCC-CCEEEEEEcCCCCcccccccccCCCCCCCeE-EEecCCCCCCCCCCCCCch
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHH-DVQVTVFVVASHDDASNSNVHAVPNNNNLFN-AVTLPLANISSLVNPDASL 85 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~ 85 (498)
|||+++.....|++.=...+.+.|+++. +.+|++++.+.+.+ .++..| .++ ++.++.. .. .
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~-----l~~~~p---~i~~v~~~~~~---~~----~-- 63 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRP-----LLSRMP---EVNEAIPMPLG---HG----A-- 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHH-----HHTTCT---TEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhH-----HHhcCC---ccCEEEEecCC---cc----c--
Confidence 6899999999999998999999999875 89999999876433 344443 453 4433210 00 0
Q ss_pred HHHHHHHHHHhhHHHHHHHHhc-CCCCcEEEeCCCchhHHHHHHHhCCcEEE
Q 041419 86 GEKILVLMHKSLPALRSAISAM-KFRPTALIVDFFGTEAMDVADEFGLLKYM 136 (498)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~-~~~pD~vI~D~~~~~a~~~A~~lgiP~v~ 136 (498)
.....+..+.+.+ ..+||++|.-....-...++...|+|..+
T Consensus 64 ---------~~~~~~~~l~~~l~~~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 64 ---------LEIGERRKLGHSLREKRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp ----------CHHHHHHHHHHTTTTTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ---------cchHHHHHHHHHHHhcCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 0111223333444 33899999322234455677888999743
No 55
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=93.15 E-value=1.1 Score=42.94 Aligned_cols=42 Identities=7% Similarity=0.124 Sum_probs=37.3
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCC-CCEEEEEEcCCCCc
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHH-DVQVTVFVVASHDD 49 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~~~ 49 (498)
|||+++-....||+.=...+.+.|+++. +.+|++++.+.+.+
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~ 43 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQ 43 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhH
Confidence 6899999999999999999999999885 88999999987443
No 56
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=88.16 E-value=1.7 Score=43.20 Aligned_cols=79 Identities=11% Similarity=-0.023 Sum_probs=54.3
Q ss_pred ceeecCCccHH---HHhccCCcceeeec---CCc-chHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCC
Q 041419 355 GLVVPAWAPQA---EILAHPSVGGFLSH---CGW-NSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTE 427 (498)
Q Consensus 355 ~~~~~~~~pq~---~lL~~~~~~~~ItH---gG~-gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~ 427 (498)
++.+.+++|+. +++..++ +||.- =|. .++.||+++|+|+|+ -..+ ....+ +.-..|+.++
T Consensus 296 ~v~f~G~~~~~~l~~~~~~ad--v~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv~----- 362 (413)
T 2x0d_A 296 HLNSLGKLTLEDYADLLKRSS--IGISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSLE----- 362 (413)
T ss_dssp EEEEEESCCHHHHHHHHHHCC--EEECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEES-----
T ss_pred cEEEcCCCCHHHHHHHHHhCC--EEEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEeC-----
Confidence 67888998765 5566777 45542 244 467999999999998 3222 12233 4434677664
Q ss_pred CCcCHHHHHHHHHHHhcCCc
Q 041419 428 SLVTRQEIEMLVRKIMVDKE 447 (498)
Q Consensus 428 ~~~~~~~l~~al~~vl~~~~ 447 (498)
.-+.++++++|.+++.|++
T Consensus 363 -~~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 363 -QLNPENIAETLVELCMSFN 381 (413)
T ss_dssp -SCSHHHHHHHHHHHHHHTC
T ss_pred -CCCHHHHHHHHHHHHcCHH
Confidence 3478999999999998854
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=87.44 E-value=6.7 Score=40.40 Aligned_cols=83 Identities=8% Similarity=0.006 Sum_probs=50.6
Q ss_pred ceeecCCccHH---HHhccCCcceeeec---CCc-chHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCC
Q 041419 355 GLVVPAWAPQA---EILAHPSVGGFLSH---CGW-NSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTE 427 (498)
Q Consensus 355 ~~~~~~~~pq~---~lL~~~~~~~~ItH---gG~-gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~ 427 (498)
++.+....+.. .++..++ +||.- =|. .+++||+++|+|.|+-.. ......| ++-.-|......+.+
T Consensus 383 ~v~~~~~~~~~~~~~~~~~aD--~~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V-~dg~~G~~~~~~~~~ 455 (536)
T 3vue_A 383 KVRAVVKFNAPLAHLIMAGAD--VLAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTV-IEGKTGFHMGRLSVD 455 (536)
T ss_dssp TEEEECSCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHC-CBTTTEEECCCCCSC
T ss_pred ceEEEEeccHHHHHHHHHhhh--eeecccccCCCCHHHHHHHHcCCCEEEcCC----CCchhee-eCCCCccccccCCCc
Confidence 56555655543 4667777 46543 244 488999999999998644 4445455 454455543311100
Q ss_pred ----CCcCHHHHHHHHHHHhc
Q 041419 428 ----SLVTRQEIEMLVRKIMV 444 (498)
Q Consensus 428 ----~~~~~~~l~~al~~vl~ 444 (498)
...+.++++++|++++.
T Consensus 456 g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 456 CKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp TTCCCHHHHHHHHHHHHHHHH
T ss_pred eeEECCCCHHHHHHHHHHHHH
Confidence 12356889999998875
No 58
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=86.22 E-value=0.44 Score=49.38 Aligned_cols=40 Identities=15% Similarity=0.250 Sum_probs=30.2
Q ss_pred CCCCCeEEEEcC--------CCccCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 4 TKLKPHICLLAS--------PGMGHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 4 ~~~~~~Ill~~~--------p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
+.++|||+|+++ |+-|++ .-+|+++|+++ ||+|++++|..
T Consensus 6 ~~~~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~~-G~~V~Vi~P~Y 53 (536)
T 3vue_A 6 HHHHMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAAN-GHRVMVISPRY 53 (536)
T ss_dssp --CCCEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHTT-TCEEEEEEECC
T ss_pred CCCCcEEEEEEEeccchhccCcHHHH--HHHHHHHHHHc-CCeEEEEecCc
Confidence 477899999973 333444 55789999999 99999999754
No 59
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=79.34 E-value=1.1 Score=44.56 Aligned_cols=42 Identities=10% Similarity=0.134 Sum_probs=33.3
Q ss_pred CCCCCeEEEEcCCCc-----cCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 4 TKLKPHICLLASPGM-----GHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 4 ~~~~~~Ill~~~p~~-----GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
...+|||++++.... |=..-...||+.|+++ ||+|+++++..
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~-GheV~Vvt~~~ 89 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNK-KFKKRIILTDA 89 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTT-TCEEEEEESSC
T ss_pred CCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHc-CCceEEEEecC
Confidence 356799998885522 4345689999999999 99999999864
No 60
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=78.65 E-value=15 Score=37.25 Aligned_cols=111 Identities=9% Similarity=-0.050 Sum_probs=71.3
Q ss_pred eeecCCccHH---HHhccCCcceeee--cCCcch-HHHHHhhC---CcEEeccccccchhhHHHHhhhhcceEEeeccCC
Q 041419 356 LVVPAWAPQA---EILAHPSVGGFLS--HCGWNS-TVESIVNG---VPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPT 426 (498)
Q Consensus 356 ~~~~~~~pq~---~lL~~~~~~~~It--HgG~gs-~~eal~~G---vP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~ 426 (498)
+.+...+|+. +++..+++ ++++ .=|+|. ..|++++| .|+|+--+.+ .+..+ . .-|+.+.
T Consensus 354 V~f~g~v~~~el~aly~~ADv-~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l-~--~~allVn---- 421 (496)
T 3t5t_A 354 VRIDNDNDVNHTIACFRRADL-LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVL-G--EYCRSVN---- 421 (496)
T ss_dssp EEEEECCCHHHHHHHHHHCSE-EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHH-G--GGSEEEC----
T ss_pred EEEeCCCCHHHHHHHHHhccE-EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHh-C--CCEEEEC----
Confidence 5555677764 55556775 4443 468885 58999996 6665543322 22222 1 1367764
Q ss_pred CCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHhh
Q 041419 427 ESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGAQKATSNSGSSYKSLSQVAKQCEKS 487 (498)
Q Consensus 427 ~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~ 487 (498)
-.+.++++++|.++|++++ ++-+++.+++++.+. ......-++.|++.|...
T Consensus 422 --P~D~~~lA~AI~~aL~m~~--~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 422 --PFDLVEQAEAISAALAAGP--RQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp --TTBHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhhc
Confidence 2588999999999998754 455566666666633 356677788888888654
No 61
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=74.78 E-value=7.3 Score=41.16 Aligned_cols=44 Identities=20% Similarity=0.237 Sum_probs=31.1
Q ss_pred eeecCCccH---------HHHhccCCcceeeec---CCc-chHHHHHhhCCcEEecccc
Q 041419 356 LVVPAWAPQ---------AEILAHPSVGGFLSH---CGW-NSTVESIVNGVPMIAWPLH 401 (498)
Q Consensus 356 ~~~~~~~pq---------~~lL~~~~~~~~ItH---gG~-gs~~eal~~GvP~v~~P~~ 401 (498)
+.+..|++. .+++..++ +||.- =|+ .+.+||+++|+|.|+--..
T Consensus 495 If~P~~L~~~d~lf~~d~~~~~~~ad--vfV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 495 IFHPEFLNANNPILGLDYDEFVRGCH--LGVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp EECCSCCCTTCSSSCCCHHHHHHHCS--EEECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred EEeccccCCCCccchhHHHHHHhhce--EEEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 334467755 46788888 46644 344 4899999999999997553
No 62
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=73.17 E-value=3.8 Score=36.45 Aligned_cols=40 Identities=18% Similarity=0.153 Sum_probs=36.2
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
.+++||++...|+.|-+. .+.|.+.|+++ |++|.++.++.
T Consensus 2 ~~~k~IllgvTGaiaa~k-~~~ll~~L~~~-g~eV~vv~T~~ 41 (209)
T 3zqu_A 2 SGPERITLAMTGASGAQY-GLRLLDCLVQE-EREVHFLISKA 41 (209)
T ss_dssp CSCSEEEEEECSSSCHHH-HHHHHHHHHHT-TCEEEEEECHH
T ss_pred CCCCEEEEEEECHHHHHH-HHHHHHHHHHC-CCEEEEEECcc
Confidence 456899999999999888 89999999999 99999999886
No 63
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=72.90 E-value=4.4 Score=36.06 Aligned_cols=44 Identities=23% Similarity=0.184 Sum_probs=36.0
Q ss_pred CCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcc
Q 041419 4 TKLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDA 50 (498)
Q Consensus 4 ~~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~ 50 (498)
...++||++...|+.+-+. ...|.+.|+++ | +|.++.++.-...
T Consensus 16 ~l~~k~IllgvTGsiaa~k-~~~ll~~L~~~-g-~V~vv~T~~A~~f 59 (209)
T 1mvl_A 16 TPRKPRVLLAASGSVAAIK-FGNLCHCFTEW-A-EVRAVVTKSSLHF 59 (209)
T ss_dssp ---CCEEEEEECSSGGGGG-HHHHHHHHHTT-S-EEEEEECTGGGGT
T ss_pred ccCCCEEEEEEeCcHHHHH-HHHHHHHHhcC-C-CEEEEEcchHHHh
Confidence 3557899999999999877 89999999998 9 9999999874443
No 64
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=71.37 E-value=2.6 Score=37.05 Aligned_cols=48 Identities=6% Similarity=-0.013 Sum_probs=39.0
Q ss_pred CCCCCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcc
Q 041419 1 MQSTKLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDA 50 (498)
Q Consensus 1 ~~~~~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~ 50 (498)
|.++..++||++...|+.|=+. ...|.+.|+++ |++|.++.++.-...
T Consensus 2 ~~~~l~~k~IllgvTGs~aa~k-~~~l~~~L~~~-g~~V~vv~T~~A~~f 49 (194)
T 1p3y_1 2 SISILKDKKLLIGICGSISSVG-ISSYLLYFKSF-FKEIRVVMTKTAEDL 49 (194)
T ss_dssp -CTTGGGCEEEEEECSCGGGGG-THHHHHHHTTT-SSEEEEEECHHHHHH
T ss_pred cccccCCCEEEEEEECHHHHHH-HHHHHHHHHHC-CCEEEEEEchhHHHH
Confidence 4555667899999999988886 78999999998 999999998764433
No 65
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=71.33 E-value=19 Score=31.51 Aligned_cols=102 Identities=10% Similarity=0.072 Sum_probs=60.1
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCC-cccccccccCCCCCCCeEEEecCCCCCCCCCCCCCch
Q 041419 7 KPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHD-DASNSNVHAVPNNNNLFNAVTLPLANISSLVNPDASL 85 (498)
Q Consensus 7 ~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 85 (498)
+=.|.+++..+.|-..-.+.+|.+...+ |++|.|+..-... +.-....++.. ++++..... ++.....+.
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~-G~rV~~vQF~Kg~~~~gE~~~l~~L----~v~~~~~g~----gf~~~~~~~ 98 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGH-GKNVGVVQFIKGTWPNGERNLLEPH----GVEFQVMAT----GFTWETQNR 98 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHT-TCCEEEEESSCCSSCCHHHHHHGGG----TCEEEECCT----TCCCCGGGH
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHC-CCeEEEEEeeCCCCCccHHHHHHhC----CcEEEEccc----ccccCCCCc
Confidence 3468888888999999999999999999 9999999754421 10011223333 366666653 221111111
Q ss_pred HHHHHHHHHHhhHHHHHHHHhc-CCCCcEEEeCCCch
Q 041419 86 GEKILVLMHKSLPALRSAISAM-KFRPTALIVDFFGT 121 (498)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~-~~~pD~vI~D~~~~ 121 (498)
... ... ....+....+.+ +.++|+||.|-+..
T Consensus 99 ~~~-~~~---a~~~l~~a~~~l~~~~yDlvILDEi~~ 131 (196)
T 1g5t_A 99 EAD-TAA---CMAVWQHGKRMLADPLLDMVVLDELTY 131 (196)
T ss_dssp HHH-HHH---HHHHHHHHHHHTTCTTCSEEEEETHHH
T ss_pred HHH-HHH---HHHHHHHHHHHHhcCCCCEEEEeCCCc
Confidence 111 111 233344444443 34899999997543
No 66
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=67.37 E-value=11 Score=34.46 Aligned_cols=124 Identities=13% Similarity=0.110 Sum_probs=67.0
Q ss_pred CCCeEEEEcCC--CccCHHHHHHHHHHHHhCCCCEEEEEEcC------CCCcccccccccCCC-CCCCeEEEecCCCCCC
Q 041419 6 LKPHICLLASP--GMGHLIPVVELGKRLVAHHDVQVTVFVVA------SHDDASNSNVHAVPN-NNNLFNAVTLPLANIS 76 (498)
Q Consensus 6 ~~~~Ill~~~p--~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~------~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~ 76 (498)
++|+.+|++.. ..|--.-.+.|++.|+++ |++|.++=+- ...+. ..+.... .....+...+..
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~-G~~V~~fKPv~~g~~~~~~D~---~~~~~~~g~~~~~~~~~~~~---- 95 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQA-GIDVAVCKPVQTGTARGDDDL---AEVGRLAGVTQLAGLARYPQ---- 95 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHT-TCCEEEEEEEECCGGGTCCHH---HHHHHHHCCCEEEEEEECSS----
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHC-CCeEEEEeeeecCCCCCCHHH---HHHHHHcCCCCCCCCeeECC----
Confidence 45666665554 458899999999999999 9999998531 11110 0111000 000111111110
Q ss_pred CCCCCCCchHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEeCCCc----------hhHHHHHHHhCCcEEEEecc
Q 041419 77 SLVNPDASLGEKILVLMHKSLPALRSAISAMKFRPTALIVDFFG----------TEAMDVADEFGLLKYMFIAS 140 (498)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~----------~~a~~~A~~lgiP~v~~~~~ 140 (498)
+........+........+.+.+.++++..+.|++|+|-.. ....++|+.++.|++.+...
T Consensus 96 ---p~sP~~aa~~~~~~~~~~~~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~ 166 (251)
T 3fgn_A 96 ---PMAPAAAAEHAGMALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTA 166 (251)
T ss_dssp ---SSCHHHHHHHTTCCCCCHHHHHHHHHTTCCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECS
T ss_pred ---CCChHHHHHHcCCCCCCHHHHHHHHHHHHhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcC
Confidence 00111111100000112346677777777789999988520 24468999999999877644
No 67
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=65.44 E-value=64 Score=27.53 Aligned_cols=103 Identities=15% Similarity=0.003 Sum_probs=56.1
Q ss_pred chhhHhhhcccCCCCcEEEEEccC-CCCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCCCCCCcccccccCCCCCcccccC
Q 041419 265 SRVIILDWLNEQPSQSVIYVSFGS-GGTLSAKQMTELAWSLELSQQRFIWVVRPPVENDVSGSYLTVVDNNSAGKLEDYL 343 (498)
Q Consensus 265 ~~~~~~~~l~~~~~~~vV~vs~GS-~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 343 (498)
...++.++|.+. ...+||.|. .. ......++..+.+-+++-++.... ...
T Consensus 33 ~A~~lg~~La~~---g~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~~---------------------~~~ 83 (176)
T 2iz6_A 33 MANELGKQIATH---GWILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGPD---------------------TSE 83 (176)
T ss_dssp HHHHHHHHHHHT---TCEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC--------------------------
T ss_pred HHHHHHHHHHHC---CCEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCchh---------------------hhh
Confidence 356777788764 256666665 32 223455555555666666653210 011
Q ss_pred ChhhhhhcCCCceeecCCccH-HHHhccCCcceeeecCCcchHHHH---HhhCCcEEecccc
Q 041419 344 PHGFLTRTDKVGLVVPAWAPQ-AEILAHPSVGGFLSHCGWNSTVES---IVNGVPMIAWPLH 401 (498)
Q Consensus 344 p~~~~~~~~~~~~~~~~~~pq-~~lL~~~~~~~~ItHgG~gs~~ea---l~~GvP~v~~P~~ 401 (498)
+..... ..++..+.+. ..++...+...++--||.||..|+ +.+++|++++|.+
T Consensus 84 ~~~~~~-----~~i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 84 ISDAVD-----IPIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp CCTTCS-----EEEECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred hccCCc-----eeEEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 111100 1233344443 233433344478888999986654 6799999999994
No 68
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=65.16 E-value=8.2 Score=34.66 Aligned_cols=105 Identities=6% Similarity=-0.081 Sum_probs=53.1
Q ss_pred HHhccCCcceeeecCCcchHHHHHhhCCcEEeccc-cccchhhHHHH----hhhhcceEEeeccCCCCCcC---HHHHHH
Q 041419 366 EILAHPSVGGFLSHCGWNSTVESIVNGVPMIAWPL-HAEQKMNATML----TEEIGVAFRSKELPTESLVT---RQEIEM 437 (498)
Q Consensus 366 ~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~-~~DQ~~na~~v----~~~~GvG~~~~~~~~~~~~~---~~~l~~ 437 (498)
+.|..++ ++|.--|.-.+.+.++.-.- ..+|+ ..|.+..+..+ .++-++-+.+- ++..+ +..|++
T Consensus 87 ~dL~~ad--LVIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIS----T~G~sP~la~~iR~ 159 (223)
T 3dfz_A 87 EDLLNVF--FIVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRGRLSLAIS----TDGASPLLTKRIKE 159 (223)
T ss_dssp GGSSSCS--EEEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEETTEEEEEE----CTTSCHHHHHHHHH
T ss_pred hHhCCCC--EEEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeCCEEEEEE----CCCCCcHHHHHHHH
Confidence 3455566 67776676555555443222 23333 24555444321 12223333332 12223 467888
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHHHHhhccCCchHHHHHH
Q 041419 438 LVRKIMVDKEGHSSIRVRAMELKYGAQKATSNSGSSYKSLSQ 479 (498)
Q Consensus 438 al~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~ 479 (498)
.|++.+- +++ ..+-+.+.++++.+++...+.....+..++
T Consensus 160 ~ie~~lp-~~~-~~~~~~~~~~R~~vk~~~~~~~~Rr~~~~~ 199 (223)
T 3dfz_A 160 DLSSNYD-ESY-TQYTQFLYECRVLIHRLNVSKSRKHELLTE 199 (223)
T ss_dssp HHHHHSC-THH-HHHHHHHHHHHHHHHHCCSCHHHHHHHHHH
T ss_pred HHHHHcc-HHH-HHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 8888884 455 788888999999987654333333333333
No 69
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=64.62 E-value=18 Score=32.24 Aligned_cols=109 Identities=10% Similarity=0.059 Sum_probs=59.1
Q ss_pred CCCCCCCeEEEEcCCCccCHHHHHHHHHHHHhCC-CCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCC
Q 041419 2 QSTKLKPHICLLASPGMGHLIPVVELGKRLVAHH-DVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVN 80 (498)
Q Consensus 2 ~~~~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (498)
+||..++||+++..+....+. +|.+++++.. +++|..+.+........ ...+.. ++.+..++... +
T Consensus 3 ~~~~~~~ri~vl~SG~gsnl~---all~~~~~~~~~~~I~~Vis~~~~a~~l-~~A~~~----gIp~~~~~~~~---~-- 69 (215)
T 3kcq_A 3 GSMKKELRVGVLISGRGSNLE---ALAKAFSTEESSVVISCVISNNAEARGL-LIAQSY----GIPTFVVKRKP---L-- 69 (215)
T ss_dssp ----CCEEEEEEESSCCHHHH---HHHHHTCCC-CSEEEEEEEESCTTCTHH-HHHHHT----TCCEEECCBTT---B--
T ss_pred CCCCCCCEEEEEEECCcHHHH---HHHHHHHcCCCCcEEEEEEeCCcchHHH-HHHHHc----CCCEEEeCccc---C--
Confidence 466777899888887765544 4555555431 37888777643111100 011111 55554443110 1
Q ss_pred CCCchHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEeCCC-chhHHHHHHHhCCcEEEEecc
Q 041419 81 PDASLGEKILVLMHKSLPALRSAISAMKFRPTALIVDFF-GTEAMDVADEFGLLKYMFIAS 140 (498)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~-~~~a~~~A~~lgiP~v~~~~~ 140 (498)
. .+.+.+.++++ +||+||.-.+ ..-...+-..+.-.++-++++
T Consensus 70 ---~------------~~~~~~~L~~~--~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 70 ---D------------IEHISTVLREH--DVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp ---C------------HHHHHHHHHHT--TCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ---C------------hHHHHHHHHHh--CCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 0 05677778888 9999986543 344456667777778876644
No 70
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=64.48 E-value=31 Score=34.86 Aligned_cols=107 Identities=12% Similarity=0.018 Sum_probs=66.3
Q ss_pred ecCCccHHH---HhccCCcceeee---cCCcc-hHHHHHhhCC-----cEEeccccccchhhHHHHhhhhcceEEeeccC
Q 041419 358 VPAWAPQAE---ILAHPSVGGFLS---HCGWN-STVESIVNGV-----PMIAWPLHAEQKMNATMLTEEIGVAFRSKELP 425 (498)
Q Consensus 358 ~~~~~pq~~---lL~~~~~~~~It---HgG~g-s~~eal~~Gv-----P~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~ 425 (498)
+.+++++.+ ++..+++ ||. .=|.| ++.||+++|+ |+|+--+.+ .+..+ .-|+.++
T Consensus 336 ~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv~--- 402 (482)
T 1uqt_A 336 LNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIVN--- 402 (482)
T ss_dssp ECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEEC---
T ss_pred eCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEEC---
Confidence 457777764 5566774 543 34665 7899999998 666654322 11112 2355554
Q ss_pred CCCCcCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHhh
Q 041419 426 TESLVTRQEIEMLVRKIMVDKEGHSSIRVRAMELKYGAQKATSNSGSSYKSLSQVAKQCEKS 487 (498)
Q Consensus 426 ~~~~~~~~~l~~al~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~ 487 (498)
-.+.++++++|.++|++++ +..+++.++.++.++ + -+...-++.|++.+.+.
T Consensus 403 ---p~d~~~lA~ai~~lL~~~~--~~r~~~~~~~~~~v~----~-~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 ---PYDRDEVAAALDRALTMSL--AERISRHAEMLDVIV----K-NDINHWQECFISDLKQI 454 (482)
T ss_dssp ---TTCHHHHHHHHHHHHTCCH--HHHHHHHHHHHHHHH----H-TCHHHHHHHHHHHHHHS
T ss_pred ---CCCHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHHhc
Confidence 2478999999999998643 233444444444433 2 35667777888877664
No 71
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=64.07 E-value=19 Score=32.94 Aligned_cols=98 Identities=10% Similarity=0.067 Sum_probs=50.9
Q ss_pred HHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCCCCCchHHHHHHHHHHhhHHHHHH
Q 041419 24 VVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVNPDASLGEKILVLMHKSLPALRSA 103 (498)
Q Consensus 24 ~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 103 (498)
+..|+++|++. | +|+++.|.....-..+. ......+++........ ..-......+..+ .+..+
T Consensus 17 i~~L~~~l~~~-g-~V~VvAP~~~~Sg~g~s----iT~~~pl~~~~~~~~~~----~~v~GTPaDCV~l------al~~~ 80 (251)
T 2wqk_A 17 INALREALKSL-G-RVVVVAPDRNLSGVGHS----LTFTEPLKMRKIDTDFY----TVIDGTPADCVHL------GYRVI 80 (251)
T ss_dssp HHHHHHHHTTT-S-EEEEEEESSCCTTSCCS----CCCSSCEEEEEEETTEE----EETTCCHHHHHHH------HHHTT
T ss_pred HHHHHHHHHhC-C-CEEEEeeCCCCcccccC----cCCCCCceeEEeeccce----eecCCChHHHHhh------hhhhh
Confidence 56789999988 7 59999988744322222 12223455544332110 0001111222211 12223
Q ss_pred HHhcCCCCcEEEeC----------CCch---hHHHHHHHhCCcEEEEec
Q 041419 104 ISAMKFRPTALIVD----------FFGT---EAMDVADEFGLLKYMFIA 139 (498)
Q Consensus 104 l~~~~~~pD~vI~D----------~~~~---~a~~~A~~lgiP~v~~~~ 139 (498)
+.+. +||+||.. .++. +|+.-|..+|||-+.++.
T Consensus 81 l~~~--~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 81 LEEK--KPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp TTTC--CCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCC--CCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 3333 89999973 2222 344556668999998773
No 72
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=63.92 E-value=7.7 Score=33.38 Aligned_cols=43 Identities=7% Similarity=0.004 Sum_probs=36.4
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCccc
Q 041419 7 KPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDAS 51 (498)
Q Consensus 7 ~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~ 51 (498)
++||++...|+.|=+. .+.|.+.|+++ |++|.++.++.-...+
T Consensus 5 ~k~IllgvTGs~aa~k-~~~ll~~L~~~-g~~V~vv~T~~A~~fi 47 (175)
T 3qjg_A 5 GENVLICLCGSVNSIN-ISHYIIELKSK-FDEVNVIASTNGRKFI 47 (175)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHTTT-CSEEEEEECTGGGGGS
T ss_pred CCEEEEEEeCHHHHHH-HHHHHHHHHHC-CCEEEEEECcCHHHHh
Confidence 3799999999988776 89999999999 9999999998744443
No 73
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=63.88 E-value=10 Score=31.06 Aligned_cols=40 Identities=20% Similarity=0.037 Sum_probs=35.8
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 6 LKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 6 ~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
.+.+|++.+.++-+|-....-++..|..+ |++|.+.+..-
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~-G~~Vi~lG~~~ 41 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNA-GFNVVNIGVLS 41 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHT-TCEEEEEEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHC-CCEEEECCCCC
Confidence 45789999999999999999999999999 99999887643
No 74
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=63.28 E-value=23 Score=30.53 Aligned_cols=38 Identities=13% Similarity=0.232 Sum_probs=30.8
Q ss_pred CeEEEE--cCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 8 PHICLL--ASPGMGHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 8 ~~Ill~--~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
|+++.+ +-|+.|--.=.+.||..|+++ |++|.++-...
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~-g~~vlliD~D~ 40 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRS-GYNIAVVDTDP 40 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCT
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHC-CCeEEEEECCC
Confidence 345444 456789999999999999999 99999998764
No 75
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=63.16 E-value=73 Score=27.46 Aligned_cols=45 Identities=16% Similarity=0.146 Sum_probs=35.1
Q ss_pred CCCCCCCCeEEEEcCC-CccCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 1 MQSTKLKPHICLLASP-GMGHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 1 ~~~~~~~~~Ill~~~p-~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
|.....+-+|.++..+ +.|-..-++.++..+..+ |.+|.++.+.-
T Consensus 1 ~~~~~~~g~i~v~~G~mgsGKTT~ll~~a~r~~~~-g~kV~v~k~~~ 46 (191)
T 1xx6_A 1 MYRPKDHGWVEVIVGPMYSGKSEELIRRIRRAKIA-KQKIQVFKPEI 46 (191)
T ss_dssp -CCCTTCCEEEEEECSTTSSHHHHHHHHHHHHHHT-TCCEEEEEEC-
T ss_pred CCcCCCCCEEEEEECCCCCcHHHHHHHHHHHHHHC-CCEEEEEEecc
Confidence 4444444567777777 999999999999999999 99999998654
No 76
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=63.03 E-value=9.3 Score=36.36 Aligned_cols=39 Identities=8% Similarity=0.157 Sum_probs=26.3
Q ss_pred CCCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCC
Q 041419 3 STKLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASH 47 (498)
Q Consensus 3 ~~~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~ 47 (498)
.||++|||+|+-.|.. .+..-++|.++ ||+|..+.+..+
T Consensus 3 ~m~~~mrivf~Gt~~f-----a~~~L~~L~~~-~~~v~~Vvt~pd 41 (318)
T 3q0i_A 3 AMSQSLRIVFAGTPDF-----AARHLAALLSS-EHEIIAVYTQPE 41 (318)
T ss_dssp ----CCEEEEECCSHH-----HHHHHHHHHTS-SSEEEEEECCCC
T ss_pred ccccCCEEEEEecCHH-----HHHHHHHHHHC-CCcEEEEEcCCC
Confidence 3577899999877633 34556788888 999988877544
No 77
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=61.86 E-value=37 Score=30.07 Aligned_cols=107 Identities=7% Similarity=-0.020 Sum_probs=58.4
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCC--EEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCCCCCch
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHHDV--QVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVNPDASL 85 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh--~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 85 (498)
|||+++..++.. -+.++.++|.+. +| +|..+.+........ ...+.. ++.+..++.. ++ . +
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~-~~~~~i~~Vvs~~~~~~~~-~~A~~~----gIp~~~~~~~---~~-~---~- 64 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESG-KVNASIELVISDNPKAYAI-ERCKKH----NVECKVIQRK---EF-P---S- 64 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTT-SSCEEEEEEEESCTTCHHH-HHHHHH----TCCEEECCGG---GS-S---S-
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhC-CCCCeEEEEEeCCCChHHH-HHHHHc----CCCEEEeCcc---cc-c---c-
Confidence 588888777654 356667788887 77 776666543221111 111111 4444433211 11 0 0
Q ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCcEEEeCCC-chhHHHHHHHhCCcEEEEecc
Q 041419 86 GEKILVLMHKSLPALRSAISAMKFRPTALIVDFF-GTEAMDVADEFGLLKYMFIAS 140 (498)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~-~~~a~~~A~~lgiP~v~~~~~ 140 (498)
.+...+.+.+.++++ +||++|+-.+ ..-...+-..+.-.++-++++
T Consensus 65 -------r~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 65 -------KKEFEERMALELKKK--GVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp -------HHHHHHHHHHHHHHT--TCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred -------hhhhhHHHHHHHHhc--CCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 011223556777888 9999986543 344445666666778876644
No 78
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=60.71 E-value=79 Score=28.58 Aligned_cols=99 Identities=13% Similarity=0.052 Sum_probs=52.6
Q ss_pred HHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCC-CCC-CCCCCchHHHHHHHHHHhhHHHH
Q 041419 24 VVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANI-SSL-VNPDASLGEKILVLMHKSLPALR 101 (498)
Q Consensus 24 ~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~l~ 101 (498)
+..|+++|++. | +|+++.|.....-..+. ......+++..++.... ++. ...-......+..+. +.
T Consensus 16 i~aL~~~l~~~-g-~V~VVAP~~~~Sg~g~s----iTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDCV~la------l~ 83 (244)
T 2e6c_A 16 LWALAEAASQF-G-EVFVAAPDTEQSAAGHA----ITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCVALG------LH 83 (244)
T ss_dssp HHHHHHHHTTT-S-EEEEEEECSSCCCCCSS----CCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHHHHH------HH
T ss_pred HHHHHHHHHhC-C-CEEEEecCCCCcCCccc----ccCCCCeEEEEeccCcCCCCCceEEEcCcHHHHHHHH------Hc
Confidence 66899999988 7 99999998854332222 22223566666543110 000 000011112222211 11
Q ss_pred HHHHhcCCCCcEEEeCC----------Cc---hhHHHHHHHhCCcEEEEec
Q 041419 102 SAISAMKFRPTALIVDF----------FG---TEAMDVADEFGLLKYMFIA 139 (498)
Q Consensus 102 ~~l~~~~~~pD~vI~D~----------~~---~~a~~~A~~lgiP~v~~~~ 139 (498)
+..+||+||... ++ ..|+.-|..+|||.+.++.
T Consensus 84 -----l~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 84 -----LFGPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp -----HSCSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred -----CCCCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 234899999642 22 2344556669999998874
No 79
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=59.58 E-value=52 Score=29.92 Aligned_cols=39 Identities=18% Similarity=0.191 Sum_probs=27.8
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCc
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDD 49 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~ 49 (498)
||||+.===+. |-.=+..|+++|++. | +|+++.|.....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~-g-~V~VVAP~~~~S 40 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSL-G-RVVVVAPDRNLS 40 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTT-S-EEEEEEESSCCT
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhc-C-CEEEEecCCCcc
Confidence 67766654333 333467899999988 7 999999988443
No 80
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=57.36 E-value=11 Score=37.65 Aligned_cols=46 Identities=15% Similarity=0.216 Sum_probs=38.6
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccc
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSN 54 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~ 54 (498)
--+++...|+.|--.-++++|.....+ |..|.|++.+...+.+...
T Consensus 198 ~liiIaG~pG~GKTtlal~ia~~~a~~-g~~vl~fSlEms~~ql~~R 243 (444)
T 3bgw_A 198 NFVLIAARPSMGKTAFALKQAKNMSDN-DDVVNLHSLEMGKKENIKR 243 (444)
T ss_dssp CEEEEEECSSSSHHHHHHHHHHHHHHT-TCEEEEECSSSCTTHHHHH
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHc-CCEEEEEECCCCHHHHHHH
Confidence 347888899999999999999999998 9999999998766544433
No 81
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=55.98 E-value=13 Score=30.70 Aligned_cols=46 Identities=24% Similarity=0.213 Sum_probs=32.4
Q ss_pred CCCCCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCC
Q 041419 1 MQSTKLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASH 47 (498)
Q Consensus 1 ~~~~~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~ 47 (498)
|.+++.+.-.+++..+..-.+++.+.+|...++. |++|+++.+-.-
T Consensus 2 ~~~~m~~kl~II~~sg~~d~~~~a~~lA~~Aaa~-g~eV~iF~t~~g 47 (144)
T 2qs7_A 2 MAEEKKKKLSIIVFSGTIDKLMPVGILTSGAAAS-GYEVNLFFTFWG 47 (144)
T ss_dssp -----CCEEEEEECCCSHHHHHHHHHHHHHHHHT-TCEEEEEECHHH
T ss_pred ccccccCCEEEEEEcCCHHHHHHHHHHHHHHHHc-CCcEEEEEehHH
Confidence 3344443444555556688899999999999999 999999997653
No 82
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=55.36 E-value=78 Score=28.27 Aligned_cols=111 Identities=13% Similarity=-0.029 Sum_probs=61.8
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCC-CCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCCCCC
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHH-DVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVNPDA 83 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 83 (498)
..+|||+|+..++..- +.++.+.|.+.. +++|..+.+......+ ....... ++.+..++... + .
T Consensus 20 ~~~~rI~~l~SG~g~~---~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~-~~~A~~~----gIp~~~~~~~~---~----~ 84 (229)
T 3auf_A 20 GHMIRIGVLISGSGTN---LQAILDGCREGRIPGRVAVVISDRADAYG-LERARRA----GVDALHMDPAA---Y----P 84 (229)
T ss_dssp TTCEEEEEEESSCCHH---HHHHHHHHHTTSSSEEEEEEEESSTTCHH-HHHHHHT----TCEEEECCGGG---S----S
T ss_pred CCCcEEEEEEeCCcHH---HHHHHHHHHhCCCCCeEEEEEcCCCchHH-HHHHHHc----CCCEEEECccc---c----c
Confidence 3457999998777543 556667777652 4788777655322111 1111222 66655443111 1 0
Q ss_pred chHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEeCCC-chhHHHHHHHhCCcEEEEecc
Q 041419 84 SLGEKILVLMHKSLPALRSAISAMKFRPTALIVDFF-GTEAMDVADEFGLLKYMFIAS 140 (498)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~-~~~a~~~A~~lgiP~v~~~~~ 140 (498)
+ . +...+.+.+.++++ +||+||+-.+ ..-...+-..+.-.++-++++
T Consensus 85 ~-r-------~~~~~~~~~~l~~~--~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 85 S-R-------TAFDAALAERLQAY--GVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp S-H-------HHHHHHHHHHHHHT--TCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred c-h-------hhccHHHHHHHHhc--CCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 0 0 11223566777888 9999886543 444456667777778876643
No 83
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=54.34 E-value=57 Score=31.97 Aligned_cols=97 Identities=14% Similarity=0.134 Sum_probs=52.0
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCCCCCc
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVNPDAS 84 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 84 (498)
.++++|+++...- .+ | .+.++.++. |++|+++........ .... .--.+..++. ..+
T Consensus 3 ~~~k~l~Il~~~~-~~--~--~i~~aa~~l-G~~vv~v~~~~~~~~------~~~~--~~d~~~~~~~---------~~d 59 (425)
T 3vot_A 3 KRNKNLAIICQNK-HL--P--FIFEEAERL-GLKVTFFYNSAEDFP------GNLP--AVERCVPLPL---------FED 59 (425)
T ss_dssp CCCCEEEEECCCT-TC--C--HHHHHHHHT-TCEEEEEEETTSCCC------CSCT--TEEEEEEECT---------TTC
T ss_pred CCCcEEEEECCCh-hH--H--HHHHHHHHC-CCEEEEEECCCcccc------cCHh--hccEEEecCC---------CCC
Confidence 3446677775443 22 2 246788888 999999876643211 0010 0112333321 011
Q ss_pred hHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEe--CCCchhHHHHHHHhCCcE
Q 041419 85 LGEKILVLMHKSLPALRSAISAMKFRPTALIV--DFFGTEAMDVADEFGLLK 134 (498)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~--D~~~~~a~~~A~~lgiP~ 134 (498)
. .. ....+..+.++. ++|.|+. |.....+..+++++|+|.
T Consensus 60 ~-~~-------~~~~~~~~~~~~--~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 60 E-EA-------AMDVVRQTFVEF--PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp H-HH-------HHHHHHHHHHHS--CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred H-HH-------HHHHHHHhhhhc--CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 1 11 122344555566 8999984 444445567889999994
No 84
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=53.41 E-value=79 Score=28.63 Aligned_cols=24 Identities=17% Similarity=0.234 Sum_probs=19.9
Q ss_pred HHHHHHHHHhCCCCEEEEEEcCCCCc
Q 041419 24 VVELGKRLVAHHDVQVTVFVVASHDD 49 (498)
Q Consensus 24 ~l~LA~~L~~r~Gh~Vt~~~~~~~~~ 49 (498)
+..|+++|++. | +|+++.|.....
T Consensus 16 i~aL~~~l~~~-g-~V~VVAP~~~~S 39 (247)
T 1j9j_A 16 IIVLAELLSEE-H-EVFVVAPDKERS 39 (247)
T ss_dssp HHHHHHHHTTT-S-EEEEEEESSCCT
T ss_pred HHHHHHHHHhC-C-CEEEEecCCCCc
Confidence 66899999988 7 999999988543
No 85
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=53.36 E-value=11 Score=31.80 Aligned_cols=41 Identities=10% Similarity=-0.009 Sum_probs=36.9
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
.++.+|++.+.++-+|-....-++..|... |++|.+....-
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~-G~eVi~lG~~~ 56 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDA-GFEVVYTGLRQ 56 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHT-TCEEECCCSBC
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHC-CCEEEECCCCC
Confidence 467899999999999999999999999999 99999987543
No 86
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=52.87 E-value=18 Score=33.14 Aligned_cols=35 Identities=20% Similarity=0.143 Sum_probs=25.1
Q ss_pred CCCCcEEE-eCCCch-hHHHHHHHhCCcEEEEecchH
Q 041419 108 KFRPTALI-VDFFGT-EAMDVADEFGLLKYMFIASNA 142 (498)
Q Consensus 108 ~~~pD~vI-~D~~~~-~a~~~A~~lgiP~v~~~~~~~ 142 (498)
...||+|| .|+..- -+..=|.++|||++.++-+.+
T Consensus 156 ~~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn~ 192 (256)
T 2vqe_B 156 KRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDS 192 (256)
T ss_dssp SSCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTTS
T ss_pred ccCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCC
Confidence 45899776 665433 466789999999998765443
No 87
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=49.72 E-value=16 Score=32.26 Aligned_cols=40 Identities=15% Similarity=0.037 Sum_probs=32.8
Q ss_pred CCCCeEEEEcCCCccCHHH-HHHHHHHHHhCCCCEEEEEEcCC
Q 041419 5 KLKPHICLLASPGMGHLIP-VVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P-~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
.+.+||++...|+ +..+- .+.|.+.|+++ |++|.++.++.
T Consensus 3 l~~k~IllgiTGs-iaayk~~~~ll~~L~~~-g~eV~vv~T~~ 43 (207)
T 3mcu_A 3 LKGKRIGFGFTGS-HCTYEEVMPHLEKLIAE-GAEVRPVVSYT 43 (207)
T ss_dssp CTTCEEEEEECSC-GGGGTTSHHHHHHHHHT-TCEEEEEECC-
T ss_pred CCCCEEEEEEECh-HHHHHHHHHHHHHHHhC-CCEEEEEEehH
Confidence 4457899988887 45665 89999999999 99999999886
No 88
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=48.92 E-value=24 Score=30.96 Aligned_cols=42 Identities=21% Similarity=0.139 Sum_probs=34.7
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCC
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASH 47 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~ 47 (498)
.+++||++.-.|+.|=+.=.+.|.+.|+++ |++|.++.++.-
T Consensus 5 l~~k~I~lgiTGs~aa~~k~~~ll~~L~~~-g~eV~vv~T~~A 46 (201)
T 3lqk_A 5 FAGKHVGFGLTGSHCTYHEVLPQMERLVEL-GAKVTPFVTHTV 46 (201)
T ss_dssp CTTCEEEEECCSCGGGGGGTHHHHHHHHHT-TCEEEEECSSCS
T ss_pred cCCCEEEEEEEChHHHHHHHHHHHHHHhhC-CCEEEEEEChhH
Confidence 456789999988855443789999999999 999999998863
No 89
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=47.70 E-value=19 Score=31.61 Aligned_cols=39 Identities=13% Similarity=0.070 Sum_probs=33.3
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCC
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASH 47 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~ 47 (498)
|||++...|+.|-+. .+.|.+.|+++.|++|.++.++.-
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A 39 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWA 39 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchH
Confidence 689999999988877 899999998753799999998763
No 90
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=47.64 E-value=1.1e+02 Score=26.99 Aligned_cols=38 Identities=24% Similarity=0.245 Sum_probs=32.0
Q ss_pred eEEEEcCC-CccCHHHHHHHHHHHHhCCCCEEEEEEcCCC
Q 041419 9 HICLLASP-GMGHLIPVVELGKRLVAHHDVQVTVFVVASH 47 (498)
Q Consensus 9 ~Ill~~~p-~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~ 47 (498)
.+.+++.+ +.|--.=++.++..+..+ |..|.++.+...
T Consensus 13 ~i~litG~mGsGKTT~ll~~~~r~~~~-g~kVli~~~~~d 51 (223)
T 2b8t_A 13 WIEFITGPMFAGKTAELIRRLHRLEYA-DVKYLVFKPKID 51 (223)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHHHHT-TCCEEEEEECCC
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHHhc-CCEEEEEEeccC
Confidence 46666666 999999999999999999 999999977653
No 91
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=47.23 E-value=85 Score=28.67 Aligned_cols=40 Identities=10% Similarity=0.107 Sum_probs=32.1
Q ss_pred CCCeEEEEc--CCCccCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 6 LKPHICLLA--SPGMGHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 6 ~~~~Ill~~--~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
.++++++++ -|+.|--.=.+.||..|+++ |.+|.++-...
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~-G~rVLLID~D~ 121 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQA-GYKTLIVDGDM 121 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhC-CCeEEEEeCCC
Confidence 445665554 36889999999999999999 99999997654
No 92
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=46.93 E-value=17 Score=32.09 Aligned_cols=44 Identities=16% Similarity=0.160 Sum_probs=34.5
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHh-CCCCEEEEEEcCCCCcc
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVA-HHDVQVTVFVVASHDDA 50 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~-r~Gh~Vt~~~~~~~~~~ 50 (498)
..++||++...|+.+=+. ...|.+.|++ + |++|.++.++.-...
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~-g~~V~vv~T~~A~~f 61 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAALK-LPLLVSKLLDIP-GLEVAVVTTERAKHF 61 (206)
T ss_dssp CSSEEEEEEECSSGGGGT-HHHHHHHHC----CEEEEEEECTGGGGS
T ss_pred cCCCEEEEEEeChHHHHH-HHHHHHHHhccc-CCEEEEEECHhHHHH
Confidence 456799999999988665 5999999999 8 999999999874433
No 93
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=46.63 E-value=34 Score=30.40 Aligned_cols=111 Identities=17% Similarity=0.108 Sum_probs=60.6
Q ss_pred CCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCCCCC
Q 041419 4 TKLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVNPDA 83 (498)
Q Consensus 4 ~~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 83 (498)
...++||+++..+....+..++. ++.+..+++|..+.+...... . ...+.. ++.+..++... . .
T Consensus 9 ~~~~~ri~vl~SG~gsnl~all~---~~~~~~~~eI~~Vis~~~a~~-~-~~A~~~----gIp~~~~~~~~---~----~ 72 (215)
T 3da8_A 9 PSAPARLVVLASGTGSLLRSLLD---AAVGDYPARVVAVGVDRECRA-A-EIAAEA----SVPVFTVRLAD---H----P 72 (215)
T ss_dssp CCSSEEEEEEESSCCHHHHHHHH---HSSTTCSEEEEEEEESSCCHH-H-HHHHHT----TCCEEECCGGG---S----S
T ss_pred CCCCcEEEEEEeCChHHHHHHHH---HHhccCCCeEEEEEeCCchHH-H-HHHHHc----CCCEEEeCccc---c----c
Confidence 45678999998888666655554 333211568887776653211 1 111112 55554432110 0 0
Q ss_pred chHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEeC-CCchhHHHHHHHhCCcEEEEecc
Q 041419 84 SLGEKILVLMHKSLPALRSAISAMKFRPTALIVD-FFGTEAMDVADEFGLLKYMFIAS 140 (498)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D-~~~~~a~~~A~~lgiP~v~~~~~ 140 (498)
+ . ....+.+.+.++++ +||++|.- +...-...+-..+.-.++-++++
T Consensus 73 ~-r-------~~~d~~~~~~l~~~--~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 73 S-R-------DAWDVAITAATAAH--EPDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp S-H-------HHHHHHHHHHHHTT--CCSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred c-h-------hhhhHHHHHHHHhh--CCCEEEEcCchhhCCHHHHhhccCCeEEeCcc
Confidence 1 0 11134567778888 99998854 43344445666666677776643
No 94
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=46.55 E-value=27 Score=31.96 Aligned_cols=41 Identities=20% Similarity=0.011 Sum_probs=37.1
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
..+.+|++.+.++..|-....-++..|..+ |++|.+++..-
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~-G~~Vi~LG~~v 161 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRAN-GYNVVDLGRDV 161 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHT-TCEEEEEEEEC
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHC-CCEEEECCCCC
Confidence 456799999999999999999999999999 99999998654
No 95
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=45.88 E-value=68 Score=28.21 Aligned_cols=111 Identities=8% Similarity=0.050 Sum_probs=60.0
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCC-CCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCCCCC
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHH-DVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVNPDA 83 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 83 (498)
|.++||+++..+....+. +|.+++++.. .++|..+.+..-..... ...+.. ++.+..++.... .
T Consensus 5 m~~~ri~vl~SG~gsnl~---all~~~~~~~l~~~I~~Visn~~~a~~l-~~A~~~----gIp~~~~~~~~~----~--- 69 (209)
T 4ds3_A 5 MKRNRVVIFISGGGSNME---ALIRAAQAPGFPAEIVAVFSDKAEAGGL-AKAEAA----GIATQVFKRKDF----A--- 69 (209)
T ss_dssp -CCEEEEEEESSCCHHHH---HHHHHHTSTTCSEEEEEEEESCTTCTHH-HHHHHT----TCCEEECCGGGS----S---
T ss_pred CCCccEEEEEECCcHHHH---HHHHHHHcCCCCcEEEEEEECCcccHHH-HHHHHc----CCCEEEeCcccc----C---
Confidence 667899888887766544 4555665541 36888877643111100 011112 555544431111 0
Q ss_pred chHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEeCCC-chhHHHHHHHhCCcEEEEecc
Q 041419 84 SLGEKILVLMHKSLPALRSAISAMKFRPTALIVDFF-GTEAMDVADEFGLLKYMFIAS 140 (498)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~-~~~a~~~A~~lgiP~v~~~~~ 140 (498)
+ . ....+.+.+.++++ +||++|+-.+ ..-...+-..+.-.++-++++
T Consensus 70 ~-r-------~~~d~~~~~~l~~~--~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 70 S-K-------EAHEDAILAALDVL--KPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp S-H-------HHHHHHHHHHHHHH--CCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred C-H-------HHHHHHHHHHHHhc--CCCEEEEeccccCcCHHHHhhccCCeEEECCc
Confidence 0 0 11124667778888 9999986543 344456666677778776643
No 96
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=45.51 E-value=24 Score=31.05 Aligned_cols=40 Identities=20% Similarity=-0.037 Sum_probs=36.3
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 6 LKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 6 ~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
++.+|++.+.++..|-....-++..|.++ |++|.+++..-
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~-G~~v~~LG~~v 126 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESG-GFTVYNLGVDI 126 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHT-TCEEEECCSSB
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHC-CCEEEECCCCC
Confidence 45689999999999999999999999999 99999988643
No 97
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=45.43 E-value=1e+02 Score=27.07 Aligned_cols=108 Identities=12% Similarity=0.026 Sum_probs=59.9
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCC-CCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCCCCCchH
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHH-DVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVNPDASLG 86 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 86 (498)
|||+++..+..+. +-+|.+.+++.. +|+|..+.+........ ...... ++.+..++... + . + .
T Consensus 1 ~ri~vl~Sg~gsn---l~ali~~~~~~~~~~~i~~Vis~~~~~~~~-~~A~~~----gIp~~~~~~~~---~-~---~-r 64 (212)
T 1jkx_A 1 MNIVVLISGNGSN---LQAIIDACKTNKIKGTVRAVFSNKADAFGL-ERARQA----GIATHTLIASA---F-D---S-R 64 (212)
T ss_dssp CEEEEEESSCCHH---HHHHHHHHHTTSSSSEEEEEEESCTTCHHH-HHHHHT----TCEEEECCGGG---C-S---S-H
T ss_pred CEEEEEEECCcHH---HHHHHHHHHcCCCCceEEEEEeCCCchHHH-HHHHHc----CCcEEEeCccc---c-c---c-h
Confidence 4787777776653 556667776642 58887777654322211 111222 66655443111 1 0 0 0
Q ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCcEEEeCCC-chhHHHHHHHhCCcEEEEecc
Q 041419 87 EKILVLMHKSLPALRSAISAMKFRPTALIVDFF-GTEAMDVADEFGLLKYMFIAS 140 (498)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~-~~~a~~~A~~lgiP~v~~~~~ 140 (498)
+...+.+.+.++++ +||+||+-.+ ..-...+-..+.-.++-++++
T Consensus 65 -------~~~~~~~~~~l~~~--~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 65 -------EAYDRELIHEIDMY--APDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp -------HHHHHHHHHHHGGG--CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -------hhccHHHHHHHHhc--CCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 11223566777888 9999986543 344456667777788877644
No 98
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=44.69 E-value=30 Score=31.07 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=37.8
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
..+++|++..-|+.|--+=++++|..|.++ |++|.++....
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~~-G~~V~v~d~D~ 44 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLRQ-GVRVMAGVVET 44 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCC
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 567899999999999999999999999999 99999888765
No 99
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=44.38 E-value=30 Score=28.01 Aligned_cols=29 Identities=7% Similarity=0.157 Sum_probs=25.1
Q ss_pred CccCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 17 GMGHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 17 ~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
........+.||....+. ||+|+++.+..
T Consensus 28 ~~~~~~~al~lA~~A~a~-g~eV~vFf~~d 56 (134)
T 3mc3_A 28 DLDRTYAPLFMASISASM-EYETSVFFMIX 56 (134)
T ss_dssp GTHHHHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CHHHHHHHHHHHHHHHHC-CCCEEEEEEeC
Confidence 467888999999999998 99999988765
No 100
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=43.78 E-value=1.2e+02 Score=30.32 Aligned_cols=87 Identities=15% Similarity=0.111 Sum_probs=54.4
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCCCCCchH
Q 041419 7 KPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVNPDASLG 86 (498)
Q Consensus 7 ~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 86 (498)
.+||+++. +-.-.+.|++.|.+- |.+|..+.+....+. .+..+ ..+. -.
T Consensus 313 Gkrv~i~~-----~~~~~~~l~~~L~el-Gm~vv~~~~~~~~~~-----~~~~~--------------~~~v-~~----- 361 (458)
T 3pdi_B 313 SARTAIAA-----DPDLLLGFDALLRSM-GAHTVAAVVPARAAA-----LVDSP--------------LPSV-RV----- 361 (458)
T ss_dssp TCEEEEEC-----CHHHHHHHHHHHHTT-TCEEEEEEESSCCSC-----CTTTT--------------SSCE-EE-----
T ss_pred CCEEEEEC-----CcHHHHHHHHHHHHC-CCEEEEEEECCCChh-----hhhCc--------------cCcE-Ee-----
Confidence 36777743 334457888999888 999999887652221 11000 0111 00
Q ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCcEEEeCCCchhHHHHHHHhCCcEEEE
Q 041419 87 EKILVLMHKSLPALRSAISAMKFRPTALIVDFFGTEAMDVADEFGLLKYMF 137 (498)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~a~~~A~~lgiP~v~~ 137 (498)
..+ ..+++.+++. +||++|.+.. ...+|+++|||++.+
T Consensus 362 ~D~--------~~le~~i~~~--~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 362 GDL--------EDLEHAARAG--QAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp SHH--------HHHHHHHHHH--TCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred CCH--------HHHHHHHHhc--CCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 011 1356777787 9999998853 457899999999854
No 101
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=43.28 E-value=71 Score=28.26 Aligned_cols=110 Identities=11% Similarity=0.107 Sum_probs=60.4
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHh-CCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCCCCC
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVA-HHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVNPDA 83 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~-r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 83 (498)
..++||+++..+..+.+.-++. +.++ . +++|..+.+........ ...+.. ++.+..++.... +
T Consensus 3 ~~~~riavl~SG~Gsnl~all~---~~~~~~-~~eI~~Vis~~~~a~~~-~~A~~~----gIp~~~~~~~~~----~--- 66 (215)
T 3tqr_A 3 REPLPIVVLISGNGTNLQAIIG---AIQKGL-AIEIRAVISNRADAYGL-KRAQQA----DIPTHIIPHEEF----P--- 66 (215)
T ss_dssp -CCEEEEEEESSCCHHHHHHHH---HHHTTC-SEEEEEEEESCTTCHHH-HHHHHT----TCCEEECCGGGS----S---
T ss_pred CCCcEEEEEEeCCcHHHHHHHH---HHHcCC-CCEEEEEEeCCcchHHH-HHHHHc----CCCEEEeCcccc----C---
Confidence 3568999888887766665554 3332 3 58888877743211100 111112 555554431111 0
Q ss_pred chHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEeCCC-chhHHHHHHHhCCcEEEEecc
Q 041419 84 SLGEKILVLMHKSLPALRSAISAMKFRPTALIVDFF-GTEAMDVADEFGLLKYMFIAS 140 (498)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~-~~~a~~~A~~lgiP~v~~~~~ 140 (498)
+ . ....+.+.+.++++ +||+||+-.+ ..-...+-..+.-.++-++++
T Consensus 67 ~---r-----~~~d~~~~~~l~~~--~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 67 S---R-----TDFESTLQKTIDHY--DPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp S---H-----HHHHHHHHHHHHTT--CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred c---h-----hHhHHHHHHHHHhc--CCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 0 0 01124567778888 9999986543 344456667777778876644
No 102
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=43.12 E-value=68 Score=29.66 Aligned_cols=24 Identities=17% Similarity=0.050 Sum_probs=20.1
Q ss_pred HHHHHHHHHhCCCCEEEEEEcCCCCc
Q 041419 24 VVELGKRLVAHHDVQVTVFVVASHDD 49 (498)
Q Consensus 24 ~l~LA~~L~~r~Gh~Vt~~~~~~~~~ 49 (498)
+..|+++|++. | +|+++.|.....
T Consensus 16 i~aL~~aL~~~-g-~V~VVAP~~~qS 39 (280)
T 1l5x_A 16 LRLLYQFALSL-G-DVDVVAPESPKS 39 (280)
T ss_dssp HHHHHHHHGGG-S-EEEEEEESSCTT
T ss_pred HHHHHHHHHhC-C-CEEEEecCCCCc
Confidence 66899999998 7 999999988543
No 103
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=42.77 E-value=80 Score=29.74 Aligned_cols=106 Identities=11% Similarity=0.024 Sum_probs=56.4
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccc-c----ccccCCCCCCCeEEEecCCCCCCCCCC
Q 041419 6 LKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASN-S----NVHAVPNNNNLFNAVTLPLANISSLVN 80 (498)
Q Consensus 6 ~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~-~----~~~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (498)
++|||+|+-.|..+ +..-++|.+. ||+|..+.+....+.-. + ..+.......++.+.. ...+
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~-~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~-----~~~~-- 68 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSS-GHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQ-----PVSL-- 68 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHT-TCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEEC-----CSCS--
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHC-CCcEEEEEeCCCCccccccccCcCHHHHHHHHcCCcEEe-----cCCC--
Confidence 46999998876433 4455777778 99998777654332100 0 0000000001222211 0111
Q ss_pred CCCchHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEeCCC-chhHHHHHHHhCCcEEEEecch
Q 041419 81 PDASLGEKILVLMHKSLPALRSAISAMKFRPTALIVDFF-GTEAMDVADEFGLLKYMFIASN 141 (498)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~-~~~a~~~A~~lgiP~v~~~~~~ 141 (498)
. .+.+.+.++++ +||++|+-.+ ..-...+-......++-++++.
T Consensus 69 ---~------------~~~~~~~l~~~--~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSL 113 (314)
T 1fmt_A 69 ---R------------PQENQQLVAEL--QADVMVVVAYGLILPKAVLEMPRLGCINVHGSL 113 (314)
T ss_dssp ---C------------SHHHHHHHHHT--TCSEEEEESCCSCCCHHHHHSSTTCEEEEESSS
T ss_pred ---C------------CHHHHHHHHhc--CCCEEEEeeccccCCHHHHhhccCCEEEEcCCc
Confidence 0 23556677888 9999885433 3444455566667788777653
No 104
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=42.61 E-value=1.3e+02 Score=26.48 Aligned_cols=108 Identities=7% Similarity=-0.035 Sum_probs=59.3
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCC-CCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCCCCCchH
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHH-DVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVNPDASLG 86 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 86 (498)
+||+++..++... +.++.++|.+.. +|+|..+.+......+. ...... ++.+..++... + . + .
T Consensus 4 ~ki~vl~sG~g~~---~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~-~~A~~~----gIp~~~~~~~~---~-~---~-~ 67 (212)
T 3av3_A 4 KRLAVFASGSGTN---FQAIVDAAKRGDLPARVALLVCDRPGAKVI-ERAARE----NVPAFVFSPKD---Y-P---S-K 67 (212)
T ss_dssp EEEEEECCSSCHH---HHHHHHHHHTTCCCEEEEEEEESSTTCHHH-HHHHHT----TCCEEECCGGG---S-S---S-H
T ss_pred cEEEEEEECCcHH---HHHHHHHHHhCCCCCeEEEEEeCCCCcHHH-HHHHHc----CCCEEEeCccc---c-c---c-h
Confidence 6888887777554 555667777652 58888777653221111 111111 45544333111 1 0 0 0
Q ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCcEEEeCCC-chhHHHHHHHhCCcEEEEecc
Q 041419 87 EKILVLMHKSLPALRSAISAMKFRPTALIVDFF-GTEAMDVADEFGLLKYMFIAS 140 (498)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~-~~~a~~~A~~lgiP~v~~~~~ 140 (498)
+...+.+.+.++++ +||++|+-.+ ..-...+-..+.-.++-++++
T Consensus 68 -------~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 68 -------AAFESEILRELKGR--QIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp -------HHHHHHHHHHHHHT--TCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred -------hhhHHHHHHHHHhc--CCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 11223556777888 9999886543 344456667777778877644
No 105
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=41.75 E-value=23 Score=30.53 Aligned_cols=45 Identities=13% Similarity=0.175 Sum_probs=36.0
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccc
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNSN 54 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~ 54 (498)
+||++...|+.|=+ =...|.+.|+++ |++|.++.++.-...+...
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~-g~~V~vv~T~~A~~fi~~~ 47 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQH-FDEVNILFSPSSKNFINTD 47 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTT-SSCEEEEECGGGGGTSCGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHC-CCEEEEEEchhHHHHHHHH
Confidence 47888888888777 578999999999 9999999998755444333
No 106
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=41.52 E-value=34 Score=29.67 Aligned_cols=39 Identities=18% Similarity=0.195 Sum_probs=33.7
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCC
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHD 48 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~ 48 (498)
+||++...|+.|-+ =...|.+.|+++ |++|.++.++.-.
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~-g~~V~vv~T~~A~ 40 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEEL-DFSVDLVISRNAK 40 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHT-TCEEEEEECHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHC-CCEEEEEEChhHH
Confidence 58999999999965 479999999999 9999999988633
No 107
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=41.36 E-value=21 Score=29.30 Aligned_cols=35 Identities=20% Similarity=0.134 Sum_probs=27.0
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcC
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVA 45 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 45 (498)
|.+.||+++=+ |++- ..+++.|.++ ||+|+++...
T Consensus 1 ~~~~~vlI~G~---G~vG--~~la~~L~~~-g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCGH---SILA--INTILQLNQR-GQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEECC---SHHH--HHHHHHHHHT-TCCEEEEECC
T ss_pred CCCCcEEEECC---CHHH--HHHHHHHHHC-CCCEEEEECC
Confidence 45678888843 5443 6889999999 9999999864
No 108
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=41.08 E-value=19 Score=29.78 Aligned_cols=41 Identities=12% Similarity=0.132 Sum_probs=28.8
Q ss_pred CCCCeEEEE-cCC-CccCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 5 KLKPHICLL-ASP-GMGHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 5 ~~~~~Ill~-~~p-~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
.+.|+++++ -+| ..-.+--++-|+..|+++ ||+|++++++.
T Consensus 4 ~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~-G~~v~VA~npA 46 (157)
T 1kjn_A 4 ESTGKALMVLGCPESPVQIPLAIYTSHKLKKK-GFRVTVTANPA 46 (157)
T ss_dssp --CCEEEEECCCSCSTTHHHHHHHHHHHHHHT-TCEEEEEECHH
T ss_pred ccceeeeEEecCCCCcchhhHHHHHHHHHHhc-CCeeEEecCHH
Confidence 344565433 333 335566678999999999 99999999886
No 109
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=40.22 E-value=26 Score=32.41 Aligned_cols=33 Identities=21% Similarity=0.180 Sum_probs=24.4
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcC
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVA 45 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 45 (498)
|||+++ |+.|-+= -.|++.|.++ ||+|+.++-.
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~-G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNAR-GHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHT-TCEEEEEESS
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHC-CCEEEEEECC
Confidence 676654 5556553 4678999999 9999998754
No 110
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=39.72 E-value=2.2e+02 Score=28.83 Aligned_cols=34 Identities=18% Similarity=0.105 Sum_probs=23.9
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 7 KPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 7 ~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
.++|+++ |+-.=.+.|++.|.+- |.+|..+.+..
T Consensus 364 GKrvaI~-----gd~~~~~~la~fL~el-Gm~vv~v~~~~ 397 (523)
T 3u7q_B 364 GKRFALW-----GDPDFVMGLVKFLLEL-GCEPVHILCHN 397 (523)
T ss_dssp TCEEEEE-----CSHHHHHHHHHHHHHT-TCEEEEEEETT
T ss_pred CCEEEEE-----CCchHHHHHHHHHHHc-CCEEEEEEeCC
Confidence 3577776 2334456788888888 99988887654
No 111
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=39.22 E-value=38 Score=24.45 Aligned_cols=49 Identities=20% Similarity=0.319 Sum_probs=33.9
Q ss_pred hCCcEEeccccccchhhHHHH--hhhhcceEEeeccCCCCCcCHHHHHHHHHHHhc
Q 041419 391 NGVPMIAWPLHAEQKMNATML--TEEIGVAFRSKELPTESLVTRQEIEMLVRKIMV 444 (498)
Q Consensus 391 ~GvP~v~~P~~~DQ~~na~~v--~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~ 444 (498)
.|+|+++.--.+.|.+....- +++-|+..-+- +..+++++...+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakkegvsydvl-----kstdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVL-----KSTDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEE-----ECCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhcCcchhhh-----ccCCHHHHHHHHHHHHH
Confidence 589999887777776544332 13446665553 56789999999998874
No 112
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=38.71 E-value=35 Score=30.24 Aligned_cols=46 Identities=15% Similarity=-0.000 Sum_probs=37.9
Q ss_pred CCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcc
Q 041419 4 TKLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDA 50 (498)
Q Consensus 4 ~~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~ 50 (498)
..++.+|++.+.++-.|-....-++..|..+ |++|.+.+..--.+.
T Consensus 89 ~~~~~~vll~~v~gd~HdiG~~iv~~~l~~~-G~~Vi~LG~~vp~e~ 134 (215)
T 3ezx_A 89 GEEAGLAITFVAEGDIHDIGHRLVTTMLGAN-GFQIVDLGVDVLNEN 134 (215)
T ss_dssp ---CCEEEEEECTTCCCCHHHHHHHHHHHHT-SCEEEECCSSCCHHH
T ss_pred CCCCCeEEEEeCCCChhHHHHHHHHHHHHHC-CCeEEEcCCCCCHHH
Confidence 3456899999999999999999999999999 999999986543333
No 113
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=38.32 E-value=90 Score=27.92 Aligned_cols=32 Identities=22% Similarity=0.226 Sum_probs=22.8
Q ss_pred CCCcEEE-eCCCch-hHHHHHHHhCCcEEEEecc
Q 041419 109 FRPTALI-VDFFGT-EAMDVADEFGLLKYMFIAS 140 (498)
Q Consensus 109 ~~pD~vI-~D~~~~-~a~~~A~~lgiP~v~~~~~ 140 (498)
..||+|| .|+..- -+..=|.++|||++.++-+
T Consensus 156 ~~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDT 189 (231)
T 3bbn_B 156 GLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 189 (231)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHTTTCCEEECCCS
T ss_pred cCCCEEEEeCCccccHHHHHHHHhCCCEEEEecC
Confidence 3699776 665333 4667789999999987633
No 114
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=38.03 E-value=1.3e+02 Score=26.54 Aligned_cols=45 Identities=11% Similarity=0.034 Sum_probs=29.9
Q ss_pred eeecCCccHH-HHhccCCcceeeecCCcchHHHHH---------hhCCcEEeccc
Q 041419 356 LVVPAWAPQA-EILAHPSVGGFLSHCGWNSTVESI---------VNGVPMIAWPL 400 (498)
Q Consensus 356 ~~~~~~~pq~-~lL~~~~~~~~ItHgG~gs~~eal---------~~GvP~v~~P~ 400 (498)
+.+....+.. .++...+-.+++--||.||.-|.. .+++|++++-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 3344555432 333333334788899999988876 47999999964
No 115
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=37.60 E-value=28 Score=32.83 Aligned_cols=42 Identities=17% Similarity=0.249 Sum_probs=35.6
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcc
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDA 50 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~ 50 (498)
--+++...|+.|--.-++++|..+..+ |..|.|++.+...+.
T Consensus 69 ~l~li~G~pG~GKTtl~l~ia~~~a~~-g~~vl~~slE~s~~~ 110 (315)
T 3bh0_A 69 NFVLIAARPSMGKTAFALKQAKNMSDN-DDVVNLHSLEMGKKE 110 (315)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHTT-TCEEEEEESSSCHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHc-CCeEEEEECCCCHHH
Confidence 347888889999999999999999988 899999998865443
No 116
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=37.42 E-value=2.6e+02 Score=28.29 Aligned_cols=96 Identities=11% Similarity=0.069 Sum_probs=53.9
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCccccc---ccccCCCCCCCeEEEecCCCCCCCCCCCCC
Q 041419 7 KPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDASNS---NVHAVPNNNNLFNAVTLPLANISSLVNPDA 83 (498)
Q Consensus 7 ~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 83 (498)
.++|+++. +-.=.+.|++.|.+- |.+|..+.+....+...+ ..++.+|.+.+..... +.
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~El-Gm~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~~v~~------------~~ 421 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLEL-GCEPTVILSHNANKRWQKAMNKMLDASPYGRDSEVFI------------NC 421 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHT-TCEEEEEEETTCCHHHHHHHHHHHHHSTTCTTCEEEE------------SC
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHC-CCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCCEEEE------------CC
Confidence 35777763 334466788888888 999988776643211100 1111111111111110 00
Q ss_pred chHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEeCCCchhHHHHHHHh-------CCcEEEE
Q 041419 84 SLGEKILVLMHKSLPALRSAISAMKFRPTALIVDFFGTEAMDVADEF-------GLLKYMF 137 (498)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~a~~~A~~l-------giP~v~~ 137 (498)
...++.+.+++. +||++|.+.. ...+|+++ |||++.+
T Consensus 422 ------------d~~~l~~~i~~~--~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 422 ------------DLWHFRSLMFTR--QPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp ------------CHHHHHHHHHHH--CCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred ------------CHHHHHHHHhhc--CCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 112345566676 8999998853 46778888 9999754
No 117
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=36.28 E-value=1.2e+02 Score=30.81 Aligned_cols=34 Identities=12% Similarity=0.240 Sum_probs=27.4
Q ss_pred HHHHHHHHhcCCCCcEEEeCCCchhHHHHHHHhCCcEEE
Q 041419 98 PALRSAISAMKFRPTALIVDFFGTEAMDVADEFGLLKYM 136 (498)
Q Consensus 98 ~~l~~~l~~~~~~pD~vI~D~~~~~a~~~A~~lgiP~v~ 136 (498)
.++.+.+++. +||++|... ....+|+++|||++.
T Consensus 446 ~el~~~i~~~--~pDl~ig~~---~~~~~a~k~gIP~~~ 479 (533)
T 1mio_A 446 HDMEVVLEKL--KPDMFFAGI---KEKFVIQKGGVLSKQ 479 (533)
T ss_dssp HHHHHHHHHH--CCSEEEECH---HHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhc--CCCEEEccc---chhHHHHhcCCCEEE
Confidence 3577888888 999999763 356889999999984
No 118
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=36.13 E-value=1.4e+02 Score=27.56 Aligned_cols=39 Identities=13% Similarity=0.277 Sum_probs=31.0
Q ss_pred CCeEEEEc--CCCccCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 7 KPHICLLA--SPGMGHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 7 ~~~Ill~~--~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
+.++++++ -|+.|--.=.+.||..|+++ |.+|.++-...
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~-G~rVLLID~D~ 131 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQT-NKRVLLIDCDM 131 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTT-TCCEEEEECCT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhC-CCCEEEEeccC
Confidence 34454443 46789999999999999999 99999997664
No 119
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=35.42 E-value=2.2e+02 Score=24.77 Aligned_cols=108 Identities=7% Similarity=0.019 Sum_probs=0.0
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCC-CCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCCCCCchH
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHH-DVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVNPDASLG 86 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 86 (498)
+||+++..+....+..++ +.+++.. +|+|..+.+........+...+. ++.+..++.....+-
T Consensus 1 ~riaVl~SG~Gs~L~aLi---~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~-----gIp~~~~~~~~~~~r-------- 64 (209)
T 1meo_A 1 ARVAVLISGTGSNLQALI---DSTREPNSSAQIDIVISNKAAVAGLDKAERA-----GIPTRVINHKLYKNR-------- 64 (209)
T ss_dssp CEEEEEESSSCTTHHHHH---HHHHSTTCSCEEEEEEESSTTCHHHHHHHHT-----TCCEEECCGGGSSSH--------
T ss_pred CeEEEEEECCchHHHHHH---HHHhcCCCCcEEEEEEeCCCChHHHHHHHHc-----CCCEEEECccccCch--------
Q ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCcEEE-eCCCchhHHHHHHHhCCcEEEEecc
Q 041419 87 EKILVLMHKSLPALRSAISAMKFRPTALI-VDFFGTEAMDVADEFGLLKYMFIAS 140 (498)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~~pD~vI-~D~~~~~a~~~A~~lgiP~v~~~~~ 140 (498)
....+.+.+.++++ +||+|| +.+...-...+-..+.-.++-++++
T Consensus 65 -------~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 65 -------VEFDSAIDLVLEEF--SIDIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp -------HHHHHHHHHHHHHT--TCCEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -------hhhhHHHHHHHHhc--CCCEEEEcchhhhCCHHHHhhhcCCEEEEccC
No 120
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=34.12 E-value=66 Score=29.08 Aligned_cols=43 Identities=14% Similarity=0.025 Sum_probs=29.5
Q ss_pred CCCC-CCeEEEEcCCCcc-----------CHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 3 STKL-KPHICLLASPGMG-----------HLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 3 ~~~~-~~~Ill~~~p~~G-----------Hv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
+||. +++|+++.....+ ...=++.--..|++. |++|+++++..
T Consensus 4 ~m~~~mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~a-G~~V~~aSp~g 58 (247)
T 3n7t_A 4 SMAPLPRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAA-GFEVDVASETG 58 (247)
T ss_dssp ---CCCSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred cccccCCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHC-CCEEEEEeCCC
Confidence 4443 3678887776421 256677778899999 99999999754
No 121
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=33.62 E-value=1.6e+02 Score=27.28 Aligned_cols=39 Identities=15% Similarity=0.234 Sum_probs=31.0
Q ss_pred CCeEEEEcC--CCccCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 7 KPHICLLAS--PGMGHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 7 ~~~Ill~~~--p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
++++++++. |+.|--.=.+.||..|+++ |.+|.++-...
T Consensus 103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~-G~rVLLID~D~ 143 (299)
T 3cio_A 103 ENNILMITGATPDSGKTFVSSTLAAVIAQS-DQKVLFIDADL 143 (299)
T ss_dssp SCCEEEEEESSSSSCHHHHHHHHHHHHHHT-TCCEEEEECCT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHhC-CCcEEEEECCC
Confidence 344544443 6889999999999999999 99999997654
No 122
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=33.41 E-value=1.9e+02 Score=26.85 Aligned_cols=33 Identities=12% Similarity=0.114 Sum_probs=19.4
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCC--CEEEEEE
Q 041419 6 LKPHICLLASPGMGHLIPVVELGKRLVAHHD--VQVTVFV 43 (498)
Q Consensus 6 ~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~G--h~Vt~~~ 43 (498)
..|+|+++ |+.|.+= -.|++.|.++ | ++|+...
T Consensus 23 ~~~~vlVt--GatG~iG--~~l~~~L~~~-g~~~~v~~~~ 57 (346)
T 4egb_A 23 NAMNILVT--GGAGFIG--SNFVHYMLQS-YETYKIINFD 57 (346)
T ss_dssp -CEEEEEE--TTTSHHH--HHHHHHHHHH-CTTEEEEEEE
T ss_pred CCCeEEEE--CCccHHH--HHHHHHHHhh-CCCcEEEEEe
Confidence 33555443 4445443 4788999999 9 5555444
No 123
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=33.08 E-value=35 Score=28.36 Aligned_cols=37 Identities=14% Similarity=0.080 Sum_probs=30.1
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCC
Q 041419 7 KPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASH 47 (498)
Q Consensus 7 ~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~ 47 (498)
..+++|+..|+. +.|++.+++.|.++ |.+|+++ ....
T Consensus 23 ~~~~llIaGG~G--ItPl~sm~~~l~~~-~~~v~l~-g~r~ 59 (158)
T 3lrx_A 23 FGKILAIGAYTG--IVEVYPIAKAWQEI-GNDVTTL-HVTF 59 (158)
T ss_dssp CSEEEEEEETTH--HHHHHHHHHHHHHH-TCEEEEE-EECB
T ss_pred CCeEEEEEccCc--HHHHHHHHHHHHhc-CCcEEEE-EeCC
Confidence 357887777663 99999999999998 8899999 6544
No 124
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=32.77 E-value=68 Score=30.43 Aligned_cols=109 Identities=11% Similarity=0.043 Sum_probs=56.9
Q ss_pred CCCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCc----ccccccccCCCCCCCeEEEecCCCCCCCC
Q 041419 3 STKLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDD----ASNSNVHAVPNNNNLFNAVTLPLANISSL 78 (498)
Q Consensus 3 ~~~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 78 (498)
+.+.+|||+|+ |--+-...+.++|.++ ||+|..+.+.+..+ .+. ..... .++.+..... +
T Consensus 18 ~~~~~mrIvf~-----G~~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~~~~~v~-~~A~~----~gIpv~~~~~-----~ 81 (329)
T 2bw0_A 18 LYFQSMKIAVI-----GQSLFGQEVYCHLRKE-GHEVVGVFTVPDKDGKADPLG-LEAEK----DGVPVFKYSR-----W 81 (329)
T ss_dssp ---CCCEEEEE-----CCHHHHHHHHHHHHHT-TCEEEEEEECCCCSSCCCHHH-HHHHH----HTCCEEECSC-----C
T ss_pred ccCCCCEEEEE-----cCcHHHHHHHHHHHHC-CCeEEEEEeCCCcCCCCCHHH-HHHHH----cCCCEEecCc-----c
Confidence 34667999998 2224444567889988 99998777633221 100 00111 1343333221 1
Q ss_pred CCCCCchHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEeCCC-chhHHHHHHHhCCcEEEEecch
Q 041419 79 VNPDASLGEKILVLMHKSLPALRSAISAMKFRPTALIVDFF-GTEAMDVADEFGLLKYMFIASN 141 (498)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~-~~~a~~~A~~lgiP~v~~~~~~ 141 (498)
... ....+.+.+.++++ +||++|+-.+ ..-...+-......++-++++.
T Consensus 82 -~~~-----------~~~~~~~~~~l~~~--~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 82 -RAK-----------GQALPDVVAKYQAL--GAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL 131 (329)
T ss_dssp -EET-----------TEECHHHHHHHHTT--CCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC
T ss_pred -ccc-----------ccccHHHHHHHHhc--CCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCc
Confidence 000 01123455667777 9999886543 2333455555566677777553
No 125
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=32.73 E-value=1.8e+02 Score=27.54 Aligned_cols=39 Identities=13% Similarity=0.162 Sum_probs=32.5
Q ss_pred CeEEEE-cCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCC
Q 041419 8 PHICLL-ASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASH 47 (498)
Q Consensus 8 ~~Ill~-~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~ 47 (498)
++|+++ .-|+.|--.-..+||..|+++ |++|.++.....
T Consensus 16 ~~i~~~sgkGGvGKTt~a~~lA~~la~~-g~~vllid~D~~ 55 (334)
T 3iqw_A 16 LRWIFVGGKGGVGKTTTSCSLAIQLAKV-RRSVLLLSTDPA 55 (334)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHTTS-SSCEEEEECCSS
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHhC-CCcEEEEECCCC
Confidence 455444 457889999999999999999 999999998853
No 126
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=31.63 E-value=46 Score=27.24 Aligned_cols=36 Identities=11% Similarity=0.096 Sum_probs=26.5
Q ss_pred CCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcC
Q 041419 4 TKLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVA 45 (498)
Q Consensus 4 ~~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 45 (498)
....++|+++=.|..| ..+++.|+++ |++|+++...
T Consensus 16 ~~~~~~v~IiG~G~iG-----~~la~~L~~~-g~~V~vid~~ 51 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLG-----SLIANLASSS-GHSVVVVDKN 51 (155)
T ss_dssp -CCCCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEEESC
T ss_pred ccCCCcEEEECCCHHH-----HHHHHHHHhC-CCeEEEEECC
Confidence 3556889888544444 5688999999 9999998754
No 127
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=31.11 E-value=1.4e+02 Score=23.66 Aligned_cols=48 Identities=15% Similarity=0.027 Sum_probs=32.3
Q ss_pred hCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHHhcC
Q 041419 391 NGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKIMVD 445 (498)
Q Consensus 391 ~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~~ 445 (498)
..+|.|++--..|.. ..... -+.|+--.+. +.++.++|..+|+.++..
T Consensus 74 ~~~pii~ls~~~~~~-~~~~~-~~~g~~~~l~-----kP~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 74 PDLPMILVTGHGDIP-MAVQA-IQDGAYDFIA-----KPFAADRLVQSARRAEEK 121 (155)
T ss_dssp TTSCEEEEECGGGHH-HHHHH-HHTTCCEEEE-----SSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChH-HHHHH-HhcCCCeEEe-----CCCCHHHHHHHHHHHHHH
Confidence 478888885544433 33333 2567655554 568999999999999974
No 128
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=30.42 E-value=18 Score=36.09 Aligned_cols=42 Identities=14% Similarity=0.227 Sum_probs=34.4
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCc
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDD 49 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~ 49 (498)
--+++...|+.|--.-++.+|.....+.|..|.|++.+...+
T Consensus 201 ~l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~ 242 (444)
T 2q6t_A 201 SLNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAA 242 (444)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHH
Confidence 347888889999999999999998863288999999886543
No 129
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=30.40 E-value=35 Score=32.49 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=26.0
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEc
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVV 44 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~ 44 (498)
|.+|+|+++=.|..|. .+|..|.++ ||+|+++..
T Consensus 2 m~~mki~iiG~G~~G~-----~~a~~L~~~-g~~V~~~~r 35 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGH-----AFAAYLALK-GQSVLAWDI 35 (359)
T ss_dssp --CCEEEEECCSHHHH-----HHHHHHHHT-TCEEEEECS
T ss_pred CCcCeEEEECCCHHHH-----HHHHHHHhC-CCEEEEEeC
Confidence 5568999997776664 478889998 999998864
No 130
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=29.83 E-value=49 Score=27.89 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=27.8
Q ss_pred CeEEEEcCCCc---cCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 8 PHICLLASPGM---GHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 8 ~~Ill~~~p~~---GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
.+|+++|.=+. ---++.-.|++.|+++ |.+|.|+.+|-
T Consensus 24 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~-G~~V~faIHPV 64 (180)
T 1pno_A 24 SKVIIVPGYGMAVAQAQHALREMADVLKKE-GVEVSYAIHPV 64 (180)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeccc
Confidence 34666553211 1346889999999999 99999999884
No 131
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=29.81 E-value=39 Score=29.96 Aligned_cols=38 Identities=11% Similarity=0.072 Sum_probs=34.0
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
|+|++..-|+.|--.=.+.||..|+++ |++|.++=...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~-g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASD-YDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTT-CSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 678888888999999999999999999 99999987654
No 132
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=29.70 E-value=2.7e+02 Score=24.54 Aligned_cols=33 Identities=24% Similarity=0.369 Sum_probs=23.5
Q ss_pred CCCcEE-EeCCCch-hHHHHHHHhCCcEEEEecch
Q 041419 109 FRPTAL-IVDFFGT-EAMDVADEFGLLKYMFIASN 141 (498)
Q Consensus 109 ~~pD~v-I~D~~~~-~a~~~A~~lgiP~v~~~~~~ 141 (498)
..||+| |.|+..- -+..=|.++|||++.++-+.
T Consensus 148 ~~Pdllvv~Dp~~e~~ai~Ea~~l~IP~IalvDTn 182 (218)
T 3r8n_B 148 GLPDALFVIDADHEHIAIKEANNLGIPVFAIVDTN 182 (218)
T ss_dssp SCCCSCEEEETGGGHHHHHHHHHHTCCCEEECCSS
T ss_pred cCCCeEEecCcccccHHHHHHHHhCCCEEEEEeCc
Confidence 479965 5776444 45567899999999877443
No 133
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=29.13 E-value=51 Score=27.89 Aligned_cols=38 Identities=18% Similarity=0.216 Sum_probs=27.7
Q ss_pred CeEEEEcCCCc---cCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 8 PHICLLASPGM---GHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 8 ~~Ill~~~p~~---GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
.+|+++|.=+. ---++.-.|++.|+++ |.+|.|+.+|-
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~-G~~V~faIHPV 63 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQ-GKKVRFGIHPV 63 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeccc
Confidence 34566553211 1346889999999999 99999999884
No 134
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=29.05 E-value=66 Score=24.80 Aligned_cols=38 Identities=18% Similarity=0.220 Sum_probs=29.6
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEE
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFV 43 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~ 43 (498)
++.|+|+++|..+.|+-.=.-.|-+.+.++ |+++.+-.
T Consensus 2 ~~~mkIlvvC~~G~~TSll~~kl~~~~~~~-gi~~~i~~ 39 (109)
T 2l2q_A 2 PGSMNILLVCGAGMSTSMLVQRIEKYAKSK-NINATIEA 39 (109)
T ss_dssp CCCEEEEEESSSSCSSCHHHHHHHHHHHHH-TCSEEEEE
T ss_pred CCceEEEEECCChHhHHHHHHHHHHHHHHC-CCCeEEEE
Confidence 455899999999999986666777888888 88765543
No 135
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=28.97 E-value=1.9e+02 Score=25.45 Aligned_cols=44 Identities=16% Similarity=0.005 Sum_probs=30.2
Q ss_pred eecCCccH-HHHhccCCcceeeecCCcchHHHHHh---------hCCcEEeccc
Q 041419 357 VVPAWAPQ-AEILAHPSVGGFLSHCGWNSTVESIV---------NGVPMIAWPL 400 (498)
Q Consensus 357 ~~~~~~pq-~~lL~~~~~~~~ItHgG~gs~~eal~---------~GvP~v~~P~ 400 (498)
.+....+. ..++..-+.+.++--||.||.-|... +++|++++-.
T Consensus 94 ~~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 94 RAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 34455554 34444444458889999999988762 4899999865
No 136
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=28.53 E-value=54 Score=34.87 Aligned_cols=114 Identities=6% Similarity=0.004 Sum_probs=76.5
Q ss_pred ecCCccHHHHhccCCcceeeecCCcchHHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCC---CCCcCHHH
Q 041419 358 VPAWAPQAEILAHPSVGGFLSHCGWNSTVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPT---ESLVTRQE 434 (498)
Q Consensus 358 ~~~~~pq~~lL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~---~~~~~~~~ 434 (498)
+..+.+-.++|..++ ++||=- .+.+.|.+..++|+|....-.|++..- ..|. ..+..+. .-.-+.++
T Consensus 603 ~~~~~di~~ll~~aD--~lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~-----~rg~--y~d~~~~~pg~~~~~~~e 672 (729)
T 3l7i_A 603 VSNYNDVSELFLISD--CLITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG-----LRGF--YMNYMEDLPGPIYTEPYG 672 (729)
T ss_dssp CTTCSCHHHHHHTCS--EEEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS-----CCSB--SSCTTSSSSSCEESSHHH
T ss_pred CCCCcCHHHHHHHhC--EEEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc-----cCCc--ccChhHhCCCCeECCHHH
Confidence 556677889999888 688874 578999999999999987766655321 1232 2221000 01246789
Q ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHH
Q 041419 435 IEMLVRKIMVDKEGHSSIRVRAMELKYGAQKATSNSGSSYKSLSQVAKQCE 485 (498)
Q Consensus 435 l~~al~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~ 485 (498)
|.++|++...+. ..++++.+++.+..-.. .+|.++.+-++.+++...
T Consensus 673 L~~~i~~~~~~~---~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 673 LAKELKNLDKVQ---QQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHHHTTHHHHH---HHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhccc---hhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCc
Confidence 999998887531 45677777777775543 678888887777776554
No 137
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=28.31 E-value=92 Score=24.74 Aligned_cols=34 Identities=9% Similarity=0.092 Sum_probs=25.5
Q ss_pred EEcCCCc--cCHHHHHHHHHHHHhCCCCEE-EEEEcCC
Q 041419 12 LLASPGM--GHLIPVVELGKRLVAHHDVQV-TVFVVAS 46 (498)
Q Consensus 12 l~~~p~~--GHv~P~l~LA~~L~~r~Gh~V-t~~~~~~ 46 (498)
++..+.. -.....+.+|..+.+. ||+| +++-...
T Consensus 6 iv~~~p~~~~~~~~al~~a~a~~~~-g~~v~~vff~~d 42 (130)
T 2hy5_A 6 QINEGPYQHQASDSAYQFAKAALEK-GHEIFRVFFYHD 42 (130)
T ss_dssp EECSCTTTSTHHHHHHHHHHHHHHT-TCEEEEEEECGG
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHhc-CCeeCEEEEech
Confidence 3344444 3467889999999999 9999 8888654
No 138
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=28.00 E-value=52 Score=26.72 Aligned_cols=35 Identities=20% Similarity=0.185 Sum_probs=24.9
Q ss_pred EEEcCCCccCHHH--HHHHHHHHHhCCCCEEEEEEcCC
Q 041419 11 CLLASPGMGHLIP--VVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 11 ll~~~p~~GHv~P--~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
.++..+-+|+... .+.+|..+.+. ||+|+++-...
T Consensus 10 ivv~~~P~g~~~~~~al~~a~a~~a~-~~~v~Vff~~D 46 (136)
T 2hy5_B 10 YLNRKAPYGTIYAWEALEVVLIGAAF-DQDVCVLFLDD 46 (136)
T ss_dssp EEECSCTTTSSHHHHHHHHHHHHGGG-CCEEEEEECGG
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHhC-CCCEEEEEEhH
Confidence 3334555565444 57789999998 99999998664
No 139
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=27.99 E-value=40 Score=32.44 Aligned_cols=31 Identities=23% Similarity=0.373 Sum_probs=26.0
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEE
Q 041419 7 KPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFV 43 (498)
Q Consensus 7 ~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~ 43 (498)
.|||+++=.+-.| +.+|..|+++ ||+|+++=
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~~-G~~v~v~E 31 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRKH-GIKVTIYE 31 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEEC
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhC-CCCEEEEe
Confidence 4899998777666 8899999999 99999883
No 140
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=27.76 E-value=42 Score=26.49 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=24.4
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcC
Q 041419 6 LKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVA 45 (498)
Q Consensus 6 ~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 45 (498)
+.|+|+++=. |.+- ..+|+.|.++ ||+|+++...
T Consensus 3 ~~m~i~IiG~---G~iG--~~~a~~L~~~-g~~v~~~d~~ 36 (140)
T 1lss_A 3 HGMYIIIAGI---GRVG--YTLAKSLSEK-GHDIVLIDID 36 (140)
T ss_dssp --CEEEEECC---SHHH--HHHHHHHHHT-TCEEEEEESC
T ss_pred CCCEEEEECC---CHHH--HHHHHHHHhC-CCeEEEEECC
Confidence 3578988833 5553 4678999999 9999998753
No 141
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=27.63 E-value=91 Score=28.07 Aligned_cols=39 Identities=8% Similarity=0.102 Sum_probs=28.7
Q ss_pred CCeEEEEcCCCcc-----------CHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 7 KPHICLLASPGMG-----------HLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 7 ~~~Ill~~~p~~G-----------Hv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
+++|+++.....+ ...=++.--..|++. |++|+++++..
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~a-G~~V~iaS~~g 52 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKH-GFEVDFVSETG 52 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTT-TCEEEEEESSS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHC-CCEEEEEeCCC
Confidence 4678887775422 235677778889998 99999999764
No 142
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=27.48 E-value=1.9e+02 Score=25.61 Aligned_cols=37 Identities=19% Similarity=0.105 Sum_probs=30.4
Q ss_pred eEEEEcCC-CccCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 9 HICLLASP-GMGHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 9 ~Ill~~~p-~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
.|-+++.+ ..|--.-++.++..+..+ |.+|.++.+.-
T Consensus 29 ~I~vitG~M~sGKTT~Llr~~~r~~~~-g~kvli~kp~~ 66 (219)
T 3e2i_A 29 WIECITGSMFSGKSEELIRRLRRGIYA-KQKVVVFKPAI 66 (219)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHHT-TCCEEEEEEC-
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHc-CCceEEEEecc
Confidence 56566665 889999999999999999 99998888764
No 143
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=26.81 E-value=57 Score=28.11 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=27.7
Q ss_pred CeEEEEcCCCc---cCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 8 PHICLLASPGM---GHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 8 ~~Ill~~~p~~---GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
.+|+++|.=+. =--++.-.|++.|+++ |.+|.|+.+|-
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~-G~~V~faIHPV 87 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKKE-GVEVSYAIHPV 87 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHHc-CCeEEEEeccc
Confidence 34566553211 1246888999999999 99999999884
No 144
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=26.77 E-value=2.7e+02 Score=27.51 Aligned_cols=34 Identities=18% Similarity=0.099 Sum_probs=26.7
Q ss_pred HHHHHHHhcCCCCcEEEeCCCchhHHHHHHHhCCcEEEE
Q 041419 99 ALRSAISAMKFRPTALIVDFFGTEAMDVADEFGLLKYMF 137 (498)
Q Consensus 99 ~l~~~l~~~~~~pD~vI~D~~~~~a~~~A~~lgiP~v~~ 137 (498)
++.+.+++. +||++|.+.. ...+|+++|||++.+
T Consensus 376 ~l~~~i~~~--~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 376 DVHQWIKNE--GVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHHS--CCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHHhc--CCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 356667777 9999998853 467899999999864
No 145
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=26.76 E-value=95 Score=30.03 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=30.5
Q ss_pred CeEEEEcC-CCccCHHHHHHHHHHHHhCCCCEEEEEEc
Q 041419 8 PHICLLAS-PGMGHLIPVVELGKRLVAHHDVQVTVFVV 44 (498)
Q Consensus 8 ~~Ill~~~-p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~ 44 (498)
++|++++. |+.|-..=..+||..|+++ |++|.++..
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~-g~~vllvd~ 38 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQ-GKRVLLAGL 38 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHC-CCCeEEEeC
Confidence 56665554 5679999999999999999 999999998
No 146
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=26.40 E-value=36 Score=31.70 Aligned_cols=38 Identities=13% Similarity=0.086 Sum_probs=26.7
Q ss_pred CCCCCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEc
Q 041419 1 MQSTKLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVV 44 (498)
Q Consensus 1 ~~~~~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~ 44 (498)
|...+.+|+|.++=.|..|. .+|+.|.++ ||+|+++..
T Consensus 1 M~~~~~~~~I~iIG~G~mG~-----~~a~~l~~~-G~~V~~~dr 38 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMGM-----GAARSCLRA-GLSTWGADL 38 (303)
T ss_dssp ------CCEEEEECCSHHHH-----HHHHHHHHT-TCEEEEECS
T ss_pred CCCCCCCCeEEEECCCHHHH-----HHHHHHHHC-CCeEEEEEC
Confidence 44456678999997777774 689999999 999998854
No 147
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=26.18 E-value=60 Score=28.10 Aligned_cols=38 Identities=18% Similarity=0.225 Sum_probs=27.7
Q ss_pred CeEEEEcCCCc---cCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 8 PHICLLASPGM---GHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 8 ~~Ill~~~p~~---GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
.+|+++|.=+. =--++.-.|++.|+++ |.+|.|+.+|-
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~-G~~V~faIHPV 86 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTEQ-GKKVRFGIHPV 86 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHHC-CCeEEEEeCcc
Confidence 34566553211 1346788999999999 99999999884
No 148
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=26.03 E-value=77 Score=28.41 Aligned_cols=26 Identities=19% Similarity=0.295 Sum_probs=21.2
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 18 MGHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 18 ~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
.|.+ -.++|++|.++ |++|++++.+.
T Consensus 28 SG~m--G~aiA~~~~~~-Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHL--GKIITETLLSA-GYEVCLITTKR 53 (232)
T ss_dssp CCHH--HHHHHHHHHHT-TCEEEEEECTT
T ss_pred CCHH--HHHHHHHHHHC-CCEEEEEeCCc
Confidence 5544 46789999999 99999999775
No 149
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=25.95 E-value=71 Score=28.98 Aligned_cols=34 Identities=29% Similarity=0.309 Sum_probs=25.2
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcC
Q 041419 6 LKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVA 45 (498)
Q Consensus 6 ~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 45 (498)
++|+|+++ |+ |-+ --.|++.|.++ ||+|+.++-.
T Consensus 2 ~~~~ilVt--Ga-G~i--G~~l~~~L~~~-g~~V~~~~r~ 35 (286)
T 3gpi_A 2 SLSKILIA--GC-GDL--GLELARRLTAQ-GHEVTGLRRS 35 (286)
T ss_dssp CCCCEEEE--CC-SHH--HHHHHHHHHHT-TCCEEEEECT
T ss_pred CCCcEEEE--CC-CHH--HHHHHHHHHHC-CCEEEEEeCC
Confidence 45677766 34 743 45789999999 9999999754
No 150
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=25.63 E-value=81 Score=28.09 Aligned_cols=42 Identities=14% Similarity=0.119 Sum_probs=29.9
Q ss_pred hHHHHHHHHhcCCCCcEEEeCCCchh-------HHHHHHHhCCcEEEEe
Q 041419 97 LPALRSAISAMKFRPTALIVDFFGTE-------AMDVADEFGLLKYMFI 138 (498)
Q Consensus 97 ~~~l~~~l~~~~~~pD~vI~D~~~~~-------a~~~A~~lgiP~v~~~ 138 (498)
.+.+.++++++...||+|++|-.... |..+...+|+|.|.+.
T Consensus 90 ~P~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 90 GPLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp HHHHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred hHHHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 35566667777668999999975554 3345666789998754
No 151
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=25.14 E-value=1.5e+02 Score=27.75 Aligned_cols=40 Identities=8% Similarity=0.061 Sum_probs=26.1
Q ss_pred HHHHHHHhcCCCCcEEEeCCC-chhHHHHHHHhCCcEEEEecc
Q 041419 99 ALRSAISAMKFRPTALIVDFF-GTEAMDVADEFGLLKYMFIAS 140 (498)
Q Consensus 99 ~l~~~l~~~~~~pD~vI~D~~-~~~a~~~A~~lgiP~v~~~~~ 140 (498)
.+.+.++++ +||++|+-.+ ..-...+-......++-++++
T Consensus 66 ~~~~~l~~~--~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 106 (305)
T 2bln_A 66 LWVERIAQL--SPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (305)
T ss_dssp HHHHHHHHT--CCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHHhc--CCCEEEEeccccccCHHHHhcCcCCEEEecCC
Confidence 455667788 9999886533 333445555556678877765
No 152
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=25.09 E-value=56 Score=27.64 Aligned_cols=38 Identities=21% Similarity=0.302 Sum_probs=28.0
Q ss_pred CeEEEEcCCCc---cCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 8 PHICLLASPGM---GHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 8 ~~Ill~~~p~~---GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
.+|+++|.=+. ---++.-.|++.|+++ |.+|.|+.+|-
T Consensus 31 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~-G~~V~faIHPV 71 (186)
T 2bru_C 31 HSVIITPGYGMAVAQAQYPVAEITEKLRAR-GINVRFGIHPV 71 (186)
T ss_dssp SEEEEECSBHHHHTTTHHHHHHHHHHHHHH-CCEEEEEECSS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeccc
Confidence 35666653211 1346889999999999 99999999884
No 153
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=24.99 E-value=53 Score=30.98 Aligned_cols=39 Identities=10% Similarity=-0.020 Sum_probs=28.8
Q ss_pred Ce-EEEEcCCCccCHH--------------HHHHHHHHHHhCCCCEEEEEEcCCC
Q 041419 8 PH-ICLLASPGMGHLI--------------PVVELGKRLVAHHDVQVTVFVVASH 47 (498)
Q Consensus 8 ~~-Ill~~~p~~GHv~--------------P~l~LA~~L~~r~Gh~Vt~~~~~~~ 47 (498)
.+ |++.+.|++=.+. --.+||+++.++ |++|+|++.+..
T Consensus 37 k~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~-Ga~V~lv~g~~s 90 (313)
T 1p9o_A 37 RRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAA-GYGVLFLYRARS 90 (313)
T ss_dssp CCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHT-TCEEEEEEETTS
T ss_pred CeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHC-CCEEEEEecCCC
Confidence 34 6666666644441 456789999999 999999998753
No 154
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=24.81 E-value=70 Score=25.94 Aligned_cols=37 Identities=14% Similarity=0.099 Sum_probs=30.0
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCC
Q 041419 7 KPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASH 47 (498)
Q Consensus 7 ~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~ 47 (498)
..+++|+..|+ =+.|++.+++.|.++ |.+|+++ ....
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~-~~~v~l~-g~R~ 54 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEI-GNDVTTL-HVTF 54 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHT-TCEEEEE-EEEE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhc-CCcEEEE-EeCC
Confidence 45788877666 499999999999998 8999998 5443
No 155
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=24.75 E-value=40 Score=34.05 Aligned_cols=42 Identities=12% Similarity=0.035 Sum_probs=34.7
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCcc
Q 041419 9 HICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVASHDDA 50 (498)
Q Consensus 9 ~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~ 50 (498)
-+++.-.|+.|--.-.+++|..+..+.|..|.|++.+...+.
T Consensus 244 l~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~ 285 (503)
T 1q57_A 244 VIMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEE 285 (503)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHH
T ss_pred EEEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHH
Confidence 467888899999999999999998643789999998875543
No 156
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=24.63 E-value=3.3e+02 Score=23.34 Aligned_cols=82 Identities=13% Similarity=0.073 Sum_probs=49.2
Q ss_pred ccHHHHhccCCcceeeecCCcchHHH-------------HHhhCCcEEecccccc----c---hhhHHHHhhhhcceEEe
Q 041419 362 APQAEILAHPSVGGFLSHCGWNSTVE-------------SIVNGVPMIAWPLHAE----Q---KMNATMLTEEIGVAFRS 421 (498)
Q Consensus 362 ~pq~~lL~~~~~~~~ItHgG~gs~~e-------------al~~GvP~v~~P~~~D----Q---~~na~~v~~~~GvG~~~ 421 (498)
+.+.++...++. .+|.-+=+||+.- ++..++|++++|-..+ . -.|-.++ ++.|+=+.-
T Consensus 73 ~~hi~l~~~aD~-~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L-~~~G~~iv~ 150 (194)
T 1p3y_1 73 HSHVEIGRWADI-YCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQL-RKDGHIVIE 150 (194)
T ss_dssp CCHHHHHHHCSE-EEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHH-HHHTCEECC
T ss_pred cCcccccccCCE-EEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHH-HHCCCEEEC
Confidence 445555555554 7777776665443 2567899999996332 2 3456666 467764332
Q ss_pred eccC-----------C-CCCcCHHHHHHHHHHHhcC
Q 041419 422 KELP-----------T-ESLVTRQEIEMLVRKIMVD 445 (498)
Q Consensus 422 ~~~~-----------~-~~~~~~~~l~~al~~vl~~ 445 (498)
+... + .+-.+.++|.+.+.+.+.+
T Consensus 151 p~~g~~f~lacg~~g~~g~~~~~~~iv~~v~~~l~~ 186 (194)
T 1p3y_1 151 PVEIMAFEIATGTRKPNRGLITPDKALLAIEKGFKE 186 (194)
T ss_dssp CBCCC------------CBCCCHHHHHHHHHHHCC-
T ss_pred CCCCcccccccCCcCcCCCCCCHHHHHHHHHHHhcc
Confidence 2211 1 1224788888888888864
No 157
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=24.59 E-value=2e+02 Score=24.77 Aligned_cols=43 Identities=7% Similarity=0.010 Sum_probs=28.1
Q ss_pred ecCCccH-HHHhccCCcceeeecCCcchHHHHH---------hhCCcEEeccc
Q 041419 358 VPAWAPQ-AEILAHPSVGGFLSHCGWNSTVESI---------VNGVPMIAWPL 400 (498)
Q Consensus 358 ~~~~~pq-~~lL~~~~~~~~ItHgG~gs~~eal---------~~GvP~v~~P~ 400 (498)
+.++... ..++...+...++--||.||.-|.. .+++|++++-.
T Consensus 94 ~~~~~~~Rk~~m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~ 146 (189)
T 3sbx_A 94 VTETMWERKQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDP 146 (189)
T ss_dssp EESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred EcCCHHHHHHHHHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecC
Confidence 3355443 3344333334788899999998875 25899999854
No 158
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=24.40 E-value=86 Score=26.47 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=23.9
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcC
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVA 45 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 45 (498)
|+|+++ |+.|.+ --.|++.|.++ ||+|+.++-.
T Consensus 4 ~~ilVt--GatG~i--G~~l~~~l~~~-g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIF--GATGQT--GLTTLAQAVQA-GYEVTVLVRD 36 (206)
T ss_dssp CEEEEE--STTSHH--HHHHHHHHHHT-TCEEEEEESC
T ss_pred CEEEEE--cCCcHH--HHHHHHHHHHC-CCeEEEEEeC
Confidence 666654 445544 45788999999 9999998754
No 159
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=24.00 E-value=1.1e+02 Score=27.51 Aligned_cols=42 Identities=21% Similarity=0.335 Sum_probs=29.9
Q ss_pred hHHHHHHHHhcCCCCcEEEeCCCchh-------HHHHHHHhCCcEEEEe
Q 041419 97 LPALRSAISAMKFRPTALIVDFFGTE-------AMDVADEFGLLKYMFI 138 (498)
Q Consensus 97 ~~~l~~~l~~~~~~pD~vI~D~~~~~-------a~~~A~~lgiP~v~~~ 138 (498)
.+.+.++++++..+||++++|-.... |.-+.-.+|+|.|-+.
T Consensus 94 ~P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 94 IPTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp HHHHHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 35666677777668999999964442 3456667889998653
No 160
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=23.90 E-value=83 Score=27.25 Aligned_cols=42 Identities=14% Similarity=0.059 Sum_probs=30.2
Q ss_pred HHHHHHHhc-CCCCcEEEeCCCchhHHHHHHHhCCcEEEEecchHH
Q 041419 99 ALRSAISAM-KFRPTALIVDFFGTEAMDVADEFGLLKYMFIASNAW 143 (498)
Q Consensus 99 ~l~~~l~~~-~~~pD~vI~D~~~~~a~~~A~~lgiP~v~~~~~~~~ 143 (498)
++...++++ ..+.|+||.|. .+..+|+++|+|.+.+.++...
T Consensus 130 e~~~~i~~l~~~G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 130 EITTLISKVKTENIKIVVSGK---TVTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp GHHHHHHHHHHTTCCEEEECH---HHHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHHHHHCCCeEEECCH---HHHHHHHHcCCcEEEEecCHHH
Confidence 444455544 44899999984 3578999999999887765543
No 161
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=23.69 E-value=2.1e+02 Score=24.78 Aligned_cols=44 Identities=16% Similarity=0.077 Sum_probs=28.2
Q ss_pred eecCCccH-HHHhccCCcceeeecCCcchHHHHHh---------hCCcEEeccc
Q 041419 357 VVPAWAPQ-AEILAHPSVGGFLSHCGWNSTVESIV---------NGVPMIAWPL 400 (498)
Q Consensus 357 ~~~~~~pq-~~lL~~~~~~~~ItHgG~gs~~eal~---------~GvP~v~~P~ 400 (498)
++.++... ..+|...+...++--||.||.-|... +++|++++-.
T Consensus 102 i~~~~~~~Rk~~m~~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~ 155 (199)
T 3qua_A 102 IVTDTMRERKREMEHRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDP 155 (199)
T ss_dssp EEESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred EEcCCHHHHHHHHHHhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcC
Confidence 33355443 33333333347888899999988743 5899998854
No 162
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=23.68 E-value=68 Score=30.93 Aligned_cols=39 Identities=15% Similarity=0.254 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCCcc-C---HHHHHHHHHHH-HhCCCCEEEEEEcC
Q 041419 6 LKPHICLLASPGMG-H---LIPVVELGKRL-VAHHDVQVTVFVVA 45 (498)
Q Consensus 6 ~~~~Ill~~~p~~G-H---v~P~l~LA~~L-~~r~Gh~Vt~~~~~ 45 (498)
++|||+++..+-.+ | +....++.++| .++ ||+|..+...
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~-g~~v~~i~~~ 45 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATG-KYEIIVFAIA 45 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHS-SEEEEEEEEC
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCccc-CcEEEEEEEc
Confidence 47899998776555 3 45678999999 998 9999998754
No 163
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=23.51 E-value=7.2e+02 Score=26.79 Aligned_cols=83 Identities=10% Similarity=-0.013 Sum_probs=46.7
Q ss_pred eeeecCCcchHHHHHhhC---CcEEecccc--ccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHHHHHhcCCcch
Q 041419 375 GFLSHCGWNSTVESIVNG---VPMIAWPLH--AEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLVRKIMVDKEGH 449 (498)
Q Consensus 375 ~~ItHgG~gs~~eal~~G---vP~v~~P~~--~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al~~vl~~~~~~ 449 (498)
+|+.||--+.+.|.++-. +|+-++.+- +.-..-...+ +. -.++++.|.+++.+++....+
T Consensus 726 i~~~gGlgsaV~ell~~r~~~~~l~v~G~~d~G~tgtp~eLl-~~-------------~gld~~~Iv~~a~~~l~~~~~- 790 (845)
T 3ahc_A 726 LFAYHSYAQDVRGLIYDRPNHDNFHVVGYKEQGSTTTPFDMV-RV-------------NDMDRYALQAAALKLIDADKY- 790 (845)
T ss_dssp EEEESSCHHHHHHHTTTSTTGGGEEEECCCSCCCSCCHHHHH-HT-------------TTCSHHHHHHHHHHHHHTTTT-
T ss_pred eeeecCcHHHHHHHHHhCCCCceEEEEeccCCCCCCCHHHHH-HH-------------hCcCHHHHHHHHHHHcchhhH-
Confidence 455777667777777655 345544442 2111222222 11 457889999999888874443
Q ss_pred HHHHHHHHHHHHHHHHhhccCCc
Q 041419 450 SSIRVRAMELKYGAQKATSNSGS 472 (498)
Q Consensus 450 ~~~~~~a~~l~~~~~~a~~~~g~ 472 (498)
..+++..+....+.++.+.+-|-
T Consensus 791 ~~~~~~~~~~~~~~~~~~~~~g~ 813 (845)
T 3ahc_A 791 ADKIDELNAFRKKAFQFAVDNGY 813 (845)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC
Confidence 55666655555555544444443
No 164
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=23.48 E-value=55 Score=28.49 Aligned_cols=36 Identities=14% Similarity=0.023 Sum_probs=26.8
Q ss_pred HHHhccCCcceeeecCCcchHHH---HHhhCCcEEeccc
Q 041419 365 AEILAHPSVGGFLSHCGWNSTVE---SIVNGVPMIAWPL 400 (498)
Q Consensus 365 ~~lL~~~~~~~~ItHgG~gs~~e---al~~GvP~v~~P~ 400 (498)
..++..-+...++--||.||..| ++.+|+|+++++.
T Consensus 112 k~~m~~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 112 SFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 44444444458888999998766 5779999999974
No 165
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=23.46 E-value=1e+02 Score=28.10 Aligned_cols=40 Identities=15% Similarity=0.189 Sum_probs=30.5
Q ss_pred HHHHHHHHhcCCCCcEEEeCCCch------hHHHHHHHhCCcEEEEec
Q 041419 98 PALRSAISAMKFRPTALIVDFFGT------EAMDVADEFGLLKYMFIA 139 (498)
Q Consensus 98 ~~l~~~l~~~~~~pD~vI~D~~~~------~a~~~A~~lgiP~v~~~~ 139 (498)
..+.+++++. +||+|++..... -+..+|..||+|+++...
T Consensus 102 ~~La~~i~~~--~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 102 RILTEVIKKE--APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHHHH--CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHhc--CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 3566677777 899999876443 466899999999997653
No 166
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=23.44 E-value=1.3e+02 Score=28.10 Aligned_cols=21 Identities=24% Similarity=0.510 Sum_probs=16.9
Q ss_pred HHhhHHHHHHHHhcCCCCcEEEe
Q 041419 94 HKSLPALRSAISAMKFRPTALIV 116 (498)
Q Consensus 94 ~~~~~~l~~~l~~~~~~pD~vI~ 116 (498)
......+.++++++ +||+||+
T Consensus 115 ~~~~~~l~~~ir~~--rP~vV~t 135 (303)
T 1q74_A 115 RQTVGALVAIIREL--RPHVVVT 135 (303)
T ss_dssp HHHHHHHHHHHHHH--CCSEEEE
T ss_pred HHHHHHHHHHHHHc--CCCEEEE
Confidence 44566788889999 9999996
No 167
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=23.21 E-value=87 Score=28.79 Aligned_cols=44 Identities=16% Similarity=0.111 Sum_probs=36.1
Q ss_pred CCCCeEEEEcCCC---ccCHHHHHHHHHHHHhCCCCEEEEEEcCCCCc
Q 041419 5 KLKPHICLLASPG---MGHLIPVVELGKRLVAHHDVQVTVFVVASHDD 49 (498)
Q Consensus 5 ~~~~~Ill~~~p~---~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~ 49 (498)
+.+|+.+|++.+. -|-=.-.-.||..|+.| |++|+..=-.++.+
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~-G~~Vt~~K~DPYlN 66 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSC-GLHVTSIKIDPYIN 66 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHT-TCCEEEEEEECSSC
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHC-CCcceeeeccccee
Confidence 6789999999984 46667788999999999 99999998776543
No 168
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=22.87 E-value=2.3e+02 Score=28.04 Aligned_cols=42 Identities=14% Similarity=0.081 Sum_probs=27.1
Q ss_pred ecCCccH-HHHhccCCcceeeecCCcchHHHHH---h---------hCCcEEecc
Q 041419 358 VPAWAPQ-AEILAHPSVGGFLSHCGWNSTVESI---V---------NGVPMIAWP 399 (498)
Q Consensus 358 ~~~~~pq-~~lL~~~~~~~~ItHgG~gs~~eal---~---------~GvP~v~~P 399 (498)
+.++.-. ..+|-..+-+.++--||.||.-|.. . +++|++.+-
T Consensus 231 iv~~m~eRK~~mv~~SDAfIaLPGG~GTLeELfEaLT~~QLg~~k~~~kPVVLlg 285 (460)
T 3bq9_A 231 ILPDIEKRLEAFVRCAHGIVIFPGGAGTAEELLYLLGILMHPDNQRQSLPVILTG 285 (460)
T ss_dssp ECSSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEE
T ss_pred EECCHHHHHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHhhccccCCCCCEEEEe
Confidence 3344432 3333333334788899999998873 2 589999983
No 169
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=22.79 E-value=1e+02 Score=28.13 Aligned_cols=33 Identities=9% Similarity=0.222 Sum_probs=26.1
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEc
Q 041419 8 PHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVV 44 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~ 44 (498)
-++++++.++.| --.++|+.|.++ |++|.++..
T Consensus 29 ~k~~lVTGas~G---IG~aia~~la~~-G~~V~~~~~ 61 (280)
T 4da9_A 29 RPVAIVTGGRRG---IGLGIARALAAS-GFDIAITGI 61 (280)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHT-TCEEEEEES
T ss_pred CCEEEEecCCCH---HHHHHHHHHHHC-CCeEEEEeC
Confidence 467888877764 356889999999 999988874
No 170
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=22.59 E-value=1.1e+02 Score=27.92 Aligned_cols=39 Identities=23% Similarity=0.319 Sum_probs=29.1
Q ss_pred CCCCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEc
Q 041419 2 QSTKLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVV 44 (498)
Q Consensus 2 ~~~~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~ 44 (498)
+++..+-++++++.++.| --.++|+.|.++ |++|.++.-
T Consensus 21 ~~~~l~~k~vlVTGas~G---IG~aia~~l~~~-G~~V~~~~r 59 (277)
T 4dqx_A 21 QSMDLNQRVCIVTGGGSG---IGRATAELFAKN-GAYVVVADV 59 (277)
T ss_dssp -CCTTTTCEEEEETTTSH---HHHHHHHHHHHT-TCEEEEEES
T ss_pred ccCCCCCCEEEEECCCcH---HHHHHHHHHHHC-CCEEEEEeC
Confidence 345455678888887765 356889999999 999988764
No 171
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=22.43 E-value=70 Score=29.01 Aligned_cols=40 Identities=15% Similarity=0.221 Sum_probs=26.3
Q ss_pred CCCCCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEc
Q 041419 1 MQSTKLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVV 44 (498)
Q Consensus 1 ~~~~~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~ 44 (498)
|++|+.+-++++++.++.| --.++|+.|.++ |++|.+...
T Consensus 20 ~~~m~~~~k~~lVTGas~G---IG~aia~~la~~-G~~Vv~~~~ 59 (267)
T 3u5t_A 20 FQSMMETNKVAIVTGASRG---IGAAIAARLASD-GFTVVINYA 59 (267)
T ss_dssp -------CCEEEEESCSSH---HHHHHHHHHHHH-TCEEEEEES
T ss_pred ccccccCCCEEEEeCCCCH---HHHHHHHHHHHC-CCEEEEEcC
Confidence 4556666678888887764 356889999999 999988643
No 172
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=22.07 E-value=87 Score=29.45 Aligned_cols=35 Identities=14% Similarity=0.040 Sum_probs=29.2
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcC
Q 041419 6 LKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVA 45 (498)
Q Consensus 6 ~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 45 (498)
..+||.|+=.+..| +-.+|+.|+++ ||+|+..=..
T Consensus 3 ~~~~i~~iGiGg~G----ms~~A~~L~~~-G~~V~~~D~~ 37 (326)
T 3eag_A 3 AMKHIHIIGIGGTF----MGGLAAIAKEA-GFEVSGCDAK 37 (326)
T ss_dssp CCCEEEEESCCSHH----HHHHHHHHHHT-TCEEEEEESS
T ss_pred CCcEEEEEEECHHH----HHHHHHHHHhC-CCEEEEEcCC
Confidence 45789999999998 45799999999 9999987543
No 173
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=21.81 E-value=1.5e+02 Score=28.18 Aligned_cols=34 Identities=9% Similarity=0.197 Sum_probs=25.7
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcC
Q 041419 9 HICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVA 45 (498)
Q Consensus 9 ~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 45 (498)
+|.+-+ .+.|-..-...|++.|.++ | +|.+.++.
T Consensus 42 ~iwih~-~s~G~~~~~~~L~~~L~~~-~-~v~v~~~~ 75 (374)
T 2xci_A 42 ALWVHT-ASIGEFNTFLPILKELKRE-H-RILLTYFS 75 (374)
T ss_dssp CEEEEC-SSHHHHHHHHHHHHHHHHH-S-CEEEEESC
T ss_pred CEEEEc-CCHHHHHHHHHHHHHHHhc-C-CEEEEEcC
Confidence 444444 4567789999999999999 8 88776654
No 174
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=21.25 E-value=1.2e+02 Score=27.21 Aligned_cols=40 Identities=13% Similarity=0.140 Sum_probs=29.6
Q ss_pred CCCCCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEc
Q 041419 1 MQSTKLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVV 44 (498)
Q Consensus 1 ~~~~~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~ 44 (498)
|..+..+-++++++.++.| --.++|+.|.++ |++|.++.-
T Consensus 1 M~~~~l~~k~~lVTGas~G---IG~aia~~l~~~-G~~V~~~~r 40 (265)
T 3lf2_A 1 MKPYDLSEAVAVVTGGSSG---IGLATVELLLEA-GAAVAFCAR 40 (265)
T ss_dssp --CCCCTTCEEEEETCSSH---HHHHHHHHHHHT-TCEEEEEES
T ss_pred CCccCcCCCEEEEeCCCCh---HHHHHHHHHHHC-CCEEEEEeC
Confidence 5555555678888887765 457889999999 999988764
No 175
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=21.24 E-value=1.3e+02 Score=27.70 Aligned_cols=38 Identities=18% Similarity=0.044 Sum_probs=24.0
Q ss_pred CCCCeEEEE-cCCCccCHHHHH--HHHHHHHhCCCCEEEEEE
Q 041419 5 KLKPHICLL-ASPGMGHLIPVV--ELGKRLVAHHDVQVTVFV 43 (498)
Q Consensus 5 ~~~~~Ill~-~~p~~GHv~P~l--~LA~~L~~r~Gh~Vt~~~ 43 (498)
+.+|+|+++ ..|-..-.+-.+ ...+.|+++ ||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~-G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQA-GHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHT-TCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHC-CCeEEEEE
Confidence 677888555 455444444333 356778888 99999875
No 176
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=21.10 E-value=1.7e+02 Score=22.37 Aligned_cols=39 Identities=26% Similarity=0.322 Sum_probs=30.2
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcC
Q 041419 6 LKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVA 45 (498)
Q Consensus 6 ~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 45 (498)
.+++|+++|..+.|--.=.-.+-+.+.++ |.++.+-...
T Consensus 2 ~mkkIll~Cg~G~sTS~l~~k~~~~~~~~-gi~~~i~a~~ 40 (106)
T 1e2b_A 2 EKKHIYLFSSAGMSTSLLVSKMRAQAEKY-EVPVIIEAFP 40 (106)
T ss_dssp CCEEEEEECSSSTTTHHHHHHHHHHHHHS-CCSEEEEEEC
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHC-CCCeEEEEec
Confidence 45789999999887776666788888888 9887665544
No 177
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=21.02 E-value=2.2e+02 Score=24.75 Aligned_cols=43 Identities=7% Similarity=0.016 Sum_probs=33.3
Q ss_pred CeEEEEcCCCccCHHHHHHHHHH-HHhCCCCEEEEEEcCCCCccc
Q 041419 8 PHICLLASPGMGHLIPVVELGKR-LVAHHDVQVTVFVVASHDDAS 51 (498)
Q Consensus 8 ~~Ill~~~p~~GHv~P~l~LA~~-L~~r~Gh~Vt~~~~~~~~~~~ 51 (498)
--+++.--|+.|--.-.+++|.. +.+. |..|.|++.+...+.+
T Consensus 31 ~l~~i~G~pG~GKT~l~l~~~~~~~~~~-~~~v~~~s~E~~~~~~ 74 (251)
T 2zts_A 31 TTVLLTGGTGTGKTTFAAQFIYKGAEEY-GEPGVFVTLEERARDL 74 (251)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHHH-CCCEEEEESSSCHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHhc-CCCceeecccCCHHHH
Confidence 34678888999999999998876 4555 7889999988665443
No 178
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=20.96 E-value=2.6e+02 Score=21.62 Aligned_cols=64 Identities=9% Similarity=0.002 Sum_probs=43.7
Q ss_pred ccCCcceeeecCCcch---------HHHHHhhCCcEEeccccccchhhHHHHhhhhcceEEeeccCCCCCcCHHHHHHHH
Q 041419 369 AHPSVGGFLSHCGWNS---------TVESIVNGVPMIAWPLHAEQKMNATMLTEEIGVAFRSKELPTESLVTRQEIEMLV 439 (498)
Q Consensus 369 ~~~~~~~~ItHgG~gs---------~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~GvG~~~~~~~~~~~~~~~~l~~al 439 (498)
..++ ++|-..|..| +..|...|+|+|.+=.++.+. .-..+ ++.+.-+. ..+.+.|.++|
T Consensus 37 ~~~~--~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l-~~~a~~iV--------~Wn~~~I~~aI 104 (111)
T 1eiw_A 37 EDAD--AVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPEL-EAVSSEVV--------GWNPHCIRDAL 104 (111)
T ss_dssp SSCS--EEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTH-HHHCSEEE--------CSCHHHHHHHH
T ss_pred ccCC--EEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHH-HhhCceec--------cCCHHHHHHHH
Confidence 4455 6887888777 567888999999998877651 11123 34344333 37889999999
Q ss_pred HHHhc
Q 041419 440 RKIMV 444 (498)
Q Consensus 440 ~~vl~ 444 (498)
+..++
T Consensus 105 ~~~~~ 109 (111)
T 1eiw_A 105 EDALD 109 (111)
T ss_dssp HHHHC
T ss_pred HhccC
Confidence 88764
No 179
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=20.74 E-value=56 Score=30.46 Aligned_cols=37 Identities=11% Similarity=0.309 Sum_probs=28.6
Q ss_pred CCCCCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEE
Q 041419 1 MQSTKLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFV 43 (498)
Q Consensus 1 ~~~~~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~ 43 (498)
|..+...++|.|+=.|..|. .+|+.|.++ ||+|+++.
T Consensus 3 m~~~~~~~~IgiIG~G~mG~-----~~A~~l~~~-G~~V~~~d 39 (306)
T 3l6d_A 3 LSDESFEFDVSVIGLGAMGT-----IMAQVLLKQ-GKRVAIWN 39 (306)
T ss_dssp CCCCCCSCSEEEECCSHHHH-----HHHHHHHHT-TCCEEEEC
T ss_pred CCcccCCCeEEEECCCHHHH-----HHHHHHHHC-CCEEEEEe
Confidence 44445668999997777664 689999999 99998774
No 180
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=20.70 E-value=1e+02 Score=28.76 Aligned_cols=34 Identities=21% Similarity=0.379 Sum_probs=28.0
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEc
Q 041419 5 KLKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVV 44 (498)
Q Consensus 5 ~~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~ 44 (498)
...|+|.++=.|..| ..+|+.|.++ ||+|+++..
T Consensus 29 ~~~~~I~iIG~G~mG-----~~~a~~l~~~-G~~V~~~dr 62 (320)
T 4dll_A 29 PYARKITFLGTGSMG-----LPMARRLCEA-GYALQVWNR 62 (320)
T ss_dssp CCCSEEEEECCTTTH-----HHHHHHHHHT-TCEEEEECS
T ss_pred cCCCEEEEECccHHH-----HHHHHHHHhC-CCeEEEEcC
Confidence 456899999888877 5688999999 999998753
No 181
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=20.60 E-value=1.7e+02 Score=27.68 Aligned_cols=100 Identities=11% Similarity=0.026 Sum_probs=57.5
Q ss_pred CCeEEEEcCCCcc--C--HHHHHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCCCC
Q 041419 7 KPHICLLASPGMG--H--LIPVVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVNPD 82 (498)
Q Consensus 7 ~~~Ill~~~p~~G--H--v~P~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 82 (498)
+.-|++.|..... . ..-+.+|++.|.++ |++|.+++.+...+.. +...+..+ -+.. .+ ...
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~-g~~vvl~g~~~e~~~~-~~i~~~~~----~~~~--------~l-~g~ 249 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRL-GYKTVFFGGPMDLEMV-QPVVEQME----TKPI--------VA-TGK 249 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH-TCEEEECCCTTTHHHH-HHHHHTCS----SCCE--------EC-TTC
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC-CCeEEEEeCcchHHHH-HHHHHhcc----cccE--------Ee-eCC
Confidence 3456666655432 1 34599999999999 9999887666533321 11122111 0000 11 111
Q ss_pred CchHHHHHHHHHHhhHHHHHHHHhcCCCCcEEEeCCCchhHHHHHHHhCCcEEEEec
Q 041419 83 ASLGEKILVLMHKSLPALRSAISAMKFRPTALIVDFFGTEAMDVADEFGLLKYMFIA 139 (498)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~a~~~A~~lgiP~v~~~~ 139 (498)
. ...++..+++.. |++|..- .....+|..+|+|++.++.
T Consensus 250 ~------------sl~e~~ali~~a----~~~i~~D--sG~~HlAaa~g~P~v~lfg 288 (349)
T 3tov_A 250 F------------QLGPLAAAMNRC----NLLITND--SGPMHVGISQGVPIVALYG 288 (349)
T ss_dssp C------------CHHHHHHHHHTC----SEEEEES--SHHHHHHHTTTCCEEEECS
T ss_pred C------------CHHHHHHHHHhC----CEEEECC--CCHHHHHHhcCCCEEEEEC
Confidence 1 123455566665 9999643 4556778899999998764
No 182
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=20.59 E-value=79 Score=29.42 Aligned_cols=33 Identities=18% Similarity=0.162 Sum_probs=27.4
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcCC
Q 041419 7 KPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVAS 46 (498)
Q Consensus 7 ~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~~ 46 (498)
+|+|+++..+ ....++++++++ ||+|.++.+..
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~-G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDE-GFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHT-TCCEEEESCGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhC-CCEEEEEECCC
Confidence 5789988876 567899999999 99999887654
No 183
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=20.53 E-value=58 Score=30.77 Aligned_cols=34 Identities=24% Similarity=0.430 Sum_probs=28.1
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCCEEEEEEcC
Q 041419 6 LKPHICLLASPGMGHLIPVVELGKRLVAHHDVQVTVFVVA 45 (498)
Q Consensus 6 ~~~~Ill~~~p~~GHv~P~l~LA~~L~~r~Gh~Vt~~~~~ 45 (498)
+.|+|+++=.|..|- .+|..|.+. ||+|+++...
T Consensus 2 ~~mkI~IiGaG~~G~-----~~a~~L~~~-g~~V~~~~r~ 35 (335)
T 3ghy_A 2 SLTRICIVGAGAVGG-----YLGARLALA-GEAINVLARG 35 (335)
T ss_dssp CCCCEEEESCCHHHH-----HHHHHHHHT-TCCEEEECCH
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHHC-CCEEEEEECh
Confidence 468899998887774 578999998 9999999864
No 184
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=20.37 E-value=1.3e+02 Score=27.25 Aligned_cols=39 Identities=8% Similarity=-0.032 Sum_probs=29.3
Q ss_pred HHHHHHHHhcCCCCcEEEeCCCch------hHHHHHHHhCCcEEEEe
Q 041419 98 PALRSAISAMKFRPTALIVDFFGT------EAMDVADEFGLLKYMFI 138 (498)
Q Consensus 98 ~~l~~~l~~~~~~pD~vI~D~~~~------~a~~~A~~lgiP~v~~~ 138 (498)
..+.+++++. +||+|++..... -+..+|..||+|+++..
T Consensus 106 ~~La~~i~~~--~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v 150 (255)
T 1efv_B 106 RVLAKLAEKE--KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFA 150 (255)
T ss_dssp HHHHHHHHHH--TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHhc--CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccce
Confidence 3455666666 799999776443 46689999999999765
No 185
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=20.22 E-value=1.3e+02 Score=27.17 Aligned_cols=38 Identities=16% Similarity=0.100 Sum_probs=28.7
Q ss_pred HHHHHHHhcCCCCcEEEeCCCch------hHHHHHHHhCCcEEEEe
Q 041419 99 ALRSAISAMKFRPTALIVDFFGT------EAMDVADEFGLLKYMFI 138 (498)
Q Consensus 99 ~l~~~l~~~~~~pD~vI~D~~~~------~a~~~A~~lgiP~v~~~ 138 (498)
.+.+++++. +||+|++..... -+..+|.+||+|+++..
T Consensus 104 ~La~~i~~~--~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v 147 (252)
T 1efp_B 104 ILAAVARAE--GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFA 147 (252)
T ss_dssp HHHHHHHHH--TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHhc--CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccE
Confidence 455566666 799999776443 46689999999999765
No 186
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=20.00 E-value=1.4e+02 Score=26.19 Aligned_cols=108 Identities=7% Similarity=0.024 Sum_probs=56.1
Q ss_pred EEEEcCCCccCHHH----HHHHHHHHHhCCCCEEEEEEcCCCCcccccccccCCCCCCCeEEEecCCCCCCCCCCCCCch
Q 041419 10 ICLLASPGMGHLIP----VVELGKRLVAHHDVQVTVFVVASHDDASNSNVHAVPNNNNLFNAVTLPLANISSLVNPDASL 85 (498)
Q Consensus 10 Ill~~~p~~GHv~P----~l~LA~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 85 (498)
|+++.=--.|.++| ++.-|+.|++..|-+|+.++-....+...+.... + +.+ +.+.+..+...+. +
T Consensus 6 ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~-~--Gad-~v~~v~~~~~~~~-----~- 75 (217)
T 3ih5_A 6 LFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILP-Y--GVD-KLHVFDAEGLYPY-----T- 75 (217)
T ss_dssp EEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGG-G--TCS-EEEEEECGGGSSC-----C-
T ss_pred EEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHh-c--CCC-EEEEecCcccccC-----C-
Confidence 55555444565544 4778888876436566665543322221222121 1 111 1122222111111 1
Q ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCcEEEeCCCchh---HHHHHHHhCCcEEE
Q 041419 86 GEKILVLMHKSLPALRSAISAMKFRPTALIVDFFGTE---AMDVADEFGLLKYM 136 (498)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~---a~~~A~~lgiP~v~ 136 (498)
.......+.+++++. +||+|++-..... +..+|.+||+|.+.
T Consensus 76 -------~~~~a~~l~~~i~~~--~p~~Vl~g~t~~G~~laprlAa~L~~~~~s 120 (217)
T 3ih5_A 76 -------SLPHTSILVNLFKEE--QPQICLMGATVIGRDLGPRVSSALTSGLTA 120 (217)
T ss_dssp -------HHHHHHHHHHHHHHH--CCSEEEEECSHHHHHHHHHHHHHTTCCCBC
T ss_pred -------HHHHHHHHHHHHHhc--CCCEEEEeCCcchhhHHHHHHHHhCCCccc
Confidence 011234556677777 8999998764443 34799999999875
Done!