Query 041423
Match_columns 500
No_of_seqs 406 out of 3279
Neff 8.0
Searched_HMMs 13730
Date Mon Mar 25 11:24:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041423.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/041423hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lv7a_ c.37.1.20 (A:) AAA dom 100.0 1.1E-36 8.2E-41 294.5 18.9 237 204-477 6-251 (256)
2 d1ixza_ c.37.1.20 (A:) AAA dom 100.0 1.2E-36 9.1E-41 292.9 17.4 224 204-464 3-235 (247)
3 d1e32a2 c.37.1.20 (A:201-458) 100.0 9.9E-36 7.2E-40 289.0 19.8 219 208-464 2-228 (258)
4 d1r7ra3 c.37.1.20 (A:471-735) 100.0 4.4E-35 3.2E-39 285.3 12.6 224 206-464 3-234 (265)
5 d1d2na_ c.37.1.20 (A:) Hexamer 99.9 1.9E-22 1.3E-26 193.2 13.8 167 211-408 10-186 (246)
6 d1w44a_ c.37.1.11 (A:) NTPase 99.9 7.6E-25 5.5E-29 215.7 -3.4 149 237-411 115-275 (321)
7 d1in4a2 c.37.1.20 (A:17-254) H 99.8 4.9E-20 3.6E-24 174.9 21.2 179 205-415 4-182 (238)
8 d1ofha_ c.37.1.20 (A:) HslU {H 99.8 6.5E-20 4.7E-24 181.3 14.5 172 212-410 16-214 (309)
9 d1ixsb2 c.37.1.20 (B:4-242) Ho 99.8 7.5E-18 5.5E-22 159.7 21.7 163 205-413 4-181 (239)
10 d1sxja2 c.37.1.20 (A:295-547) 99.8 4.7E-18 3.4E-22 162.2 16.4 168 203-411 7-198 (253)
11 d1njfa_ c.37.1.20 (A:) delta p 99.7 1.5E-16 1.1E-20 151.0 20.6 187 205-461 7-223 (239)
12 d1iqpa2 c.37.1.20 (A:2-232) Re 99.7 1.9E-16 1.4E-20 149.0 16.5 157 202-414 16-185 (231)
13 d1sxjb2 c.37.1.20 (B:7-230) Re 99.7 7.5E-16 5.4E-20 144.4 18.1 186 203-459 8-207 (224)
14 d1svma_ c.37.1.20 (A:) Papillo 99.6 2.1E-16 1.5E-20 158.5 12.2 133 239-403 149-291 (362)
15 d1sxjc2 c.37.1.20 (C:12-238) R 99.6 2.7E-15 1.9E-19 140.6 18.9 155 203-413 7-174 (227)
16 d1sxjd2 c.37.1.20 (D:26-262) R 99.6 2.9E-14 2.1E-18 133.9 19.0 183 203-456 5-211 (237)
17 d1sxje2 c.37.1.20 (E:4-255) Re 99.6 8.2E-15 6E-19 139.1 12.7 154 203-411 4-204 (252)
18 d1w5sa2 c.37.1.20 (A:7-293) CD 99.4 1E-12 7.6E-17 125.6 18.0 224 208-477 14-282 (287)
19 d1r6bx3 c.37.1.20 (X:437-751) 99.4 1.3E-12 9.7E-17 128.3 19.0 158 211-411 23-231 (315)
20 d1a5ta2 c.37.1.20 (A:1-207) de 99.4 3.6E-12 2.6E-16 117.6 20.4 125 243-410 23-180 (207)
21 d1fnna2 c.37.1.20 (A:1-276) CD 99.4 2.5E-12 1.9E-16 122.1 18.6 165 203-411 9-206 (276)
22 d1um8a_ c.37.1.20 (A:) ClpX {H 99.4 3.1E-12 2.2E-16 127.9 18.2 189 211-428 18-296 (364)
23 d1qvra3 c.37.1.20 (A:536-850) 99.4 3.2E-12 2.3E-16 125.5 16.4 158 211-411 24-236 (315)
24 d1r6bx2 c.37.1.20 (X:169-436) 99.4 1.5E-11 1.1E-15 117.3 18.9 193 209-461 17-240 (268)
25 d1l8qa2 c.37.1.20 (A:77-289) C 99.3 1.5E-11 1.1E-15 113.9 15.4 131 245-412 37-180 (213)
26 d1jbka_ c.37.1.20 (A:) ClpB, A 99.3 2.4E-12 1.8E-16 116.5 8.7 148 209-406 21-194 (195)
27 d1g8pa_ c.37.1.20 (A:) ATPase 99.3 4.6E-12 3.3E-16 125.4 11.0 148 207-407 4-212 (333)
28 d1qvra2 c.37.1.20 (A:149-535) 99.2 1.3E-10 9.5E-15 116.6 16.9 193 209-463 21-245 (387)
29 d2gnoa2 c.37.1.20 (A:11-208) g 99.1 7.7E-10 5.6E-14 100.9 14.7 113 244-399 15-140 (198)
30 d1g41a_ c.37.1.20 (A:) HslU {H 98.9 4.3E-09 3.1E-13 107.3 12.4 70 212-281 16-86 (443)
31 d2fnaa2 c.37.1.20 (A:1-283) Ar 98.8 1.9E-08 1.4E-12 94.8 14.6 56 208-280 10-65 (283)
32 d1gvnb_ c.37.1.21 (B:) Plasmid 98.8 1.2E-09 8.4E-14 103.6 4.5 59 217-280 10-68 (273)
33 d1ny5a2 c.37.1.20 (A:138-384) 98.7 1E-07 7.6E-12 89.4 16.3 85 212-307 2-106 (247)
34 d1ye8a1 c.37.1.11 (A:1-178) Hy 98.4 1.3E-06 9.8E-11 76.5 11.6 27 247-273 3-29 (178)
35 d1kaga_ c.37.1.2 (A:) Shikimat 98.1 7.9E-07 5.7E-11 76.2 4.3 31 244-274 2-32 (169)
36 d1tuea_ c.37.1.20 (A:) Replica 98.0 1.2E-06 8.5E-11 78.4 3.8 60 240-305 49-108 (205)
37 d2a5yb3 c.37.1.20 (B:109-385) 98.0 9E-05 6.5E-09 69.9 17.6 48 211-268 21-68 (277)
38 d1lw7a2 c.37.1.1 (A:220-411) T 98.0 1.5E-06 1.1E-10 76.0 3.6 31 244-274 7-37 (192)
39 d2awna2 c.37.1.12 (A:4-235) Ma 98.0 6.7E-07 4.9E-11 82.5 1.0 147 247-398 29-216 (232)
40 d3dhwc1 c.37.1.12 (C:1-240) Me 97.9 3.4E-06 2.5E-10 78.1 4.8 147 247-398 34-226 (240)
41 d1v43a3 c.37.1.12 (A:7-245) Hy 97.9 1E-06 7.5E-11 81.6 1.0 148 246-398 34-222 (239)
42 d1rkba_ c.37.1.1 (A:) Adenylat 97.9 3E-06 2.2E-10 73.4 4.0 29 246-274 6-34 (173)
43 d1viaa_ c.37.1.2 (A:) Shikimat 97.9 2.3E-06 1.7E-10 74.4 3.1 30 246-275 2-31 (161)
44 d1vpla_ c.37.1.12 (A:) Putativ 97.9 1.3E-06 9.6E-11 81.0 1.4 49 246-294 30-81 (238)
45 d1e6ca_ c.37.1.2 (A:) Shikimat 97.8 3.8E-06 2.7E-10 73.5 3.2 31 245-275 3-33 (170)
46 d1zp6a1 c.37.1.25 (A:6-181) Hy 97.8 3.6E-06 2.6E-10 73.2 3.0 33 245-277 5-37 (176)
47 d1qhxa_ c.37.1.3 (A:) Chloramp 97.8 7.5E-06 5.4E-10 71.0 4.8 33 245-277 4-36 (178)
48 d2pmka1 c.37.1.12 (A:467-707) 97.8 1.3E-05 9.8E-10 74.2 6.6 53 246-298 31-87 (241)
49 d3d31a2 c.37.1.12 (A:1-229) Su 97.8 2.5E-05 1.8E-09 71.5 8.0 33 247-279 29-61 (229)
50 d2iyva1 c.37.1.2 (A:2-166) Shi 97.7 5.9E-06 4.3E-10 71.8 3.2 30 247-276 4-33 (165)
51 d1g2912 c.37.1.12 (1:1-240) Ma 97.7 1.5E-06 1.1E-10 80.5 -1.0 33 247-279 32-64 (240)
52 d2bdta1 c.37.1.25 (A:1-176) Hy 97.7 8.2E-06 6E-10 70.3 3.7 29 245-273 3-31 (176)
53 d3b60a1 c.37.1.12 (A:329-581) 97.7 4.9E-05 3.6E-09 70.8 9.2 53 245-297 42-98 (253)
54 d1knqa_ c.37.1.17 (A:) Glucona 97.7 1E-05 7.4E-10 70.0 4.0 30 245-274 7-36 (171)
55 d2i3ba1 c.37.1.11 (A:1-189) Ca 97.7 9.1E-06 6.6E-10 70.7 3.4 24 245-268 2-25 (189)
56 d1g6ha_ c.37.1.12 (A:) MJ1267 97.6 2.2E-05 1.6E-09 73.3 5.6 41 239-279 23-65 (254)
57 d1u0ja_ c.37.1.20 (A:) Rep 40 97.6 0.00014 9.9E-09 68.3 11.0 60 240-306 100-159 (267)
58 d2hyda1 c.37.1.12 (A:324-578) 97.6 5E-05 3.7E-09 70.7 7.9 53 245-297 45-101 (255)
59 d2onka1 c.37.1.12 (A:1-240) Mo 97.6 3.6E-06 2.6E-10 77.7 -0.9 33 247-279 27-59 (240)
60 d1y63a_ c.37.1.1 (A:) Probable 97.6 2.2E-05 1.6E-09 67.9 4.4 27 244-270 5-31 (174)
61 d1oxxk2 c.37.1.12 (K:1-242) Gl 97.6 2.9E-06 2.1E-10 78.5 -1.5 38 242-279 27-66 (242)
62 d1zina1 c.37.1.1 (A:1-125,A:16 97.5 2.6E-05 1.9E-09 68.3 4.3 28 247-274 3-30 (182)
63 d1jj7a_ c.37.1.12 (A:) Peptide 97.5 4.2E-05 3.1E-09 71.2 5.8 52 246-297 42-97 (251)
64 d1yj5a2 c.37.1.1 (A:351-522) 5 97.5 3.5E-05 2.6E-09 67.5 5.0 61 243-305 13-74 (172)
65 d1qf9a_ c.37.1.1 (A:) UMP/CMP 97.5 2.5E-05 1.8E-09 69.4 4.0 31 244-274 6-36 (194)
66 d1ak2a1 c.37.1.1 (A:14-146,A:1 97.5 3.4E-05 2.4E-09 68.3 4.4 28 247-274 6-33 (190)
67 d2cdna1 c.37.1.1 (A:1-181) Ade 97.5 3.5E-05 2.6E-09 67.6 4.4 29 246-274 2-30 (181)
68 d1zaka1 c.37.1.1 (A:3-127,A:15 97.5 2.3E-05 1.7E-09 69.4 3.1 29 245-273 4-32 (189)
69 d1s3ga1 c.37.1.1 (A:1-125,A:16 97.4 4.3E-05 3.1E-09 67.1 4.3 28 247-274 3-30 (182)
70 d1ukza_ c.37.1.1 (A:) Uridylat 97.4 4E-05 2.9E-09 68.1 3.9 29 246-274 10-38 (196)
71 d1ji0a_ c.37.1.12 (A:) Branche 97.4 2.8E-05 2E-09 71.9 2.8 34 247-280 35-68 (240)
72 d1m8pa3 c.37.1.15 (A:391-573) 97.4 2.9E-05 2.1E-09 67.2 2.7 24 247-270 9-32 (183)
73 d1r0wa_ c.37.1.12 (A:) Cystic 97.4 0.00015 1.1E-08 68.4 7.8 41 237-277 53-95 (281)
74 d2ak3a1 c.37.1.1 (A:0-124,A:16 97.4 5E-05 3.7E-09 67.4 4.0 28 247-274 9-36 (189)
75 d1x6va3 c.37.1.4 (A:34-228) Ad 97.4 1.3E-05 9.8E-10 70.7 0.1 27 247-273 22-48 (195)
76 d3adka_ c.37.1.1 (A:) Adenylat 97.3 5E-05 3.6E-09 67.5 3.8 30 245-274 9-38 (194)
77 d1akya1 c.37.1.1 (A:3-130,A:16 97.3 5.8E-05 4.2E-09 66.2 4.1 28 247-274 5-32 (180)
78 d1l2ta_ c.37.1.12 (A:) MJ0796 97.3 0.00043 3.1E-08 63.1 10.2 35 246-280 33-67 (230)
79 d1ckea_ c.37.1.1 (A:) CMP kina 97.3 6E-05 4.4E-09 67.9 4.1 29 246-274 5-33 (225)
80 d1teva_ c.37.1.1 (A:) UMP/CMP 97.3 6.5E-05 4.7E-09 66.5 4.0 28 246-273 3-30 (194)
81 d1e4va1 c.37.1.1 (A:1-121,A:15 97.3 6.4E-05 4.6E-09 65.7 3.9 28 247-274 3-30 (179)
82 d1wb9a2 c.37.1.12 (A:567-800) 97.2 0.0011 7.7E-08 60.7 12.0 63 244-306 41-131 (234)
83 d1mv5a_ c.37.1.12 (A:) Multidr 97.2 9.8E-05 7.2E-09 68.2 4.7 28 246-273 30-57 (242)
84 d1tf7a2 c.37.1.11 (A:256-497) 97.2 0.0011 8E-08 60.1 12.0 39 240-278 22-63 (242)
85 d1ly1a_ c.37.1.1 (A:) Polynucl 97.2 7.5E-05 5.4E-09 63.0 3.1 24 245-268 3-26 (152)
86 d1q3ta_ c.37.1.1 (A:) CMP kina 97.2 0.00011 7.8E-09 66.4 4.0 28 247-274 6-33 (223)
87 d1ls1a2 c.37.1.10 (A:89-295) G 97.1 0.00093 6.8E-08 59.9 10.0 35 246-280 12-49 (207)
88 d1okkd2 c.37.1.10 (D:97-303) G 97.1 0.00078 5.7E-08 60.4 9.2 37 244-280 6-45 (207)
89 d1u94a1 c.37.1.11 (A:6-268) Re 97.1 0.00081 5.9E-08 62.6 9.2 39 240-278 50-91 (263)
90 d1b0ua_ c.37.1.12 (A:) ATP-bin 97.0 8.9E-05 6.5E-09 69.1 2.2 32 247-278 31-62 (258)
91 d1khta_ c.37.1.1 (A:) Adenylat 97.0 0.00014 1E-08 62.9 3.2 27 245-271 2-28 (190)
92 d1np6a_ c.37.1.10 (A:) Molybdo 97.0 0.00017 1.2E-08 61.7 3.3 33 246-278 4-39 (170)
93 d1xp8a1 c.37.1.11 (A:15-282) R 97.0 0.0018 1.3E-07 60.3 10.7 40 240-279 53-95 (268)
94 d1l7vc_ c.37.1.12 (C:) ABC tra 97.0 0.00079 5.8E-08 61.4 7.9 22 247-268 28-49 (231)
95 d1bifa1 c.37.1.7 (A:37-249) 6- 96.9 0.00015 1.1E-08 64.5 2.8 25 246-270 4-28 (213)
96 d1j8yf2 c.37.1.10 (F:87-297) G 96.9 0.001 7.3E-08 59.8 8.2 37 244-280 12-51 (211)
97 d2qy9a2 c.37.1.10 (A:285-495) 96.9 0.0011 7.8E-08 59.6 8.3 37 244-280 9-48 (211)
98 d1htwa_ c.37.1.18 (A:) Hypothe 96.9 0.0025 1.8E-07 54.3 9.8 89 213-307 8-118 (158)
99 d1tf7a1 c.37.1.11 (A:14-255) C 96.8 0.0028 2.1E-07 56.6 10.7 38 240-277 22-63 (242)
100 d1mo6a1 c.37.1.11 (A:1-269) Re 96.8 0.0024 1.7E-07 59.4 10.0 40 240-279 56-98 (269)
101 d1ewqa2 c.37.1.12 (A:542-765) 96.8 0.0015 1.1E-07 59.2 8.2 61 246-306 37-125 (224)
102 d1pzna2 c.37.1.11 (A:96-349) D 96.7 0.0008 5.8E-08 61.3 5.8 29 240-268 32-60 (254)
103 d1szpa2 c.37.1.11 (A:145-395) 96.7 0.00042 3.1E-08 62.7 3.8 28 240-267 30-57 (251)
104 d1n0wa_ c.37.1.11 (A:) DNA rep 96.7 0.00035 2.5E-08 61.7 3.1 29 240-268 19-47 (242)
105 d1nksa_ c.37.1.1 (A:) Adenylat 96.6 0.00037 2.7E-08 60.5 2.7 25 247-271 4-28 (194)
106 d1nlfa_ c.37.1.11 (A:) Hexamer 96.6 0.006 4.4E-07 56.2 11.2 27 242-268 27-53 (274)
107 d1v5wa_ c.37.1.11 (A:) Meiotic 96.5 0.00067 4.9E-08 61.8 3.7 29 240-268 33-61 (258)
108 d1gkya_ c.37.1.1 (A:) Guanylat 96.5 0.0008 5.8E-08 59.0 4.0 28 245-272 2-29 (186)
109 d1r2qa_ c.37.1.8 (A:) Rab5a {H 96.5 0.0035 2.6E-07 53.5 8.1 20 247-266 9-28 (170)
110 d1sgwa_ c.37.1.12 (A:) Putativ 96.4 0.00069 5E-08 60.4 3.3 33 247-279 30-62 (200)
111 d1m7ga_ c.37.1.4 (A:) Adenosin 96.4 0.001 7.6E-08 59.6 4.5 32 246-277 26-61 (208)
112 d1lvga_ c.37.1.1 (A:) Guanylat 96.4 0.0011 7.8E-08 58.5 4.5 27 246-272 2-28 (190)
113 d3raba_ c.37.1.8 (A:) Rab3a {R 96.4 0.0037 2.7E-07 53.4 7.7 21 247-267 8-28 (169)
114 d1r8sa_ c.37.1.8 (A:) ADP-ribo 96.4 0.0028 2E-07 53.0 6.7 21 247-267 3-23 (160)
115 d1rz3a_ c.37.1.6 (A:) Hypothet 96.3 0.00063 4.6E-08 59.4 2.4 24 247-270 25-48 (198)
116 d1z0fa1 c.37.1.8 (A:8-173) Rab 96.3 0.0051 3.7E-07 52.2 8.4 20 247-266 7-26 (166)
117 d2a5ja1 c.37.1.8 (A:9-181) Rab 96.3 0.002 1.4E-07 55.5 5.5 21 247-267 6-26 (173)
118 d1vmaa2 c.37.1.10 (A:82-294) G 96.3 0.002 1.4E-07 57.8 5.4 36 245-280 12-50 (213)
119 d1zj6a1 c.37.1.8 (A:2-178) ADP 96.3 0.0036 2.6E-07 53.4 7.0 22 246-267 17-38 (177)
120 d1xjca_ c.37.1.10 (A:) Molybdo 96.2 0.0018 1.3E-07 55.3 4.7 33 246-278 3-38 (165)
121 d2ew1a1 c.37.1.8 (A:4-174) Rab 96.1 0.0044 3.2E-07 52.9 6.8 20 247-266 8-27 (171)
122 d1g6oa_ c.37.1.11 (A:) Hexamer 96.1 0.0052 3.8E-07 58.7 7.7 28 244-271 166-193 (323)
123 d1yzqa1 c.37.1.8 (A:14-177) Ra 96.1 0.0057 4.2E-07 51.7 7.2 20 247-266 3-22 (164)
124 d1nrjb_ c.37.1.8 (B:) Signal r 96.1 0.015 1.1E-06 50.7 10.4 24 244-267 3-26 (209)
125 d1z0ja1 c.37.1.8 (A:2-168) Rab 96.0 0.0077 5.6E-07 51.1 7.8 20 247-266 7-26 (167)
126 d2bmea1 c.37.1.8 (A:6-179) Rab 96.0 0.0055 4E-07 52.4 6.8 20 247-266 8-27 (174)
127 d1p9ra_ c.37.1.11 (A:) Extrace 96.0 0.0063 4.6E-07 59.9 8.0 85 207-306 135-238 (401)
128 d1znwa1 c.37.1.1 (A:20-201) Gu 96.0 0.0017 1.2E-07 56.5 3.3 25 245-269 3-27 (182)
129 d1a1va1 c.37.1.14 (A:190-325) 96.0 0.0057 4.2E-07 50.1 6.5 34 245-278 9-42 (136)
130 d1ksha_ c.37.1.8 (A:) ADP-ribo 95.9 0.003 2.2E-07 53.6 4.6 21 246-266 4-24 (165)
131 d1uj2a_ c.37.1.6 (A:) Uridine- 95.8 0.0021 1.5E-07 57.2 3.3 25 247-271 5-29 (213)
132 d2i1qa2 c.37.1.11 (A:65-322) D 95.8 0.0017 1.2E-07 58.5 2.5 29 240-268 30-58 (258)
133 d1odfa_ c.37.1.6 (A:) Hypothet 95.7 0.0074 5.4E-07 56.4 6.8 35 246-280 29-69 (286)
134 d1nn5a_ c.37.1.1 (A:) Thymidyl 95.7 0.0038 2.8E-07 55.7 4.5 32 245-276 2-38 (209)
135 d1u8za_ c.37.1.8 (A:) Ras-rela 95.7 0.017 1.2E-06 49.0 8.6 21 246-266 6-26 (168)
136 d1kaoa_ c.37.1.8 (A:) Rap2a {H 95.7 0.021 1.5E-06 48.2 9.1 21 247-267 6-26 (167)
137 d1ctqa_ c.37.1.8 (A:) cH-p21 R 95.5 0.022 1.6E-06 48.0 8.7 21 247-267 6-26 (166)
138 d1yrba1 c.37.1.10 (A:1-244) AT 95.5 0.0053 3.8E-07 55.2 4.8 31 247-277 3-35 (244)
139 d2fn4a1 c.37.1.8 (A:24-196) r- 95.5 0.014 1E-06 49.7 7.4 20 247-266 9-28 (173)
140 d1z2aa1 c.37.1.8 (A:8-171) Rab 95.5 0.0069 5E-07 51.3 5.2 20 247-266 5-24 (164)
141 d1sq5a_ c.37.1.6 (A:) Pantothe 95.5 0.008 5.8E-07 56.8 6.1 35 246-280 82-121 (308)
142 d2f9la1 c.37.1.8 (A:8-182) Rab 95.4 0.01 7.4E-07 50.8 6.2 20 247-266 7-26 (175)
143 d1kkma_ c.91.1.2 (A:) HPr kina 95.4 0.0049 3.6E-07 53.4 4.0 30 244-274 14-43 (176)
144 d1g16a_ c.37.1.8 (A:) Rab-rela 95.4 0.0062 4.5E-07 51.6 4.7 20 247-266 5-24 (166)
145 d1w36d1 c.37.1.19 (D:2-360) Ex 95.4 0.0066 4.8E-07 58.8 5.2 21 246-266 165-185 (359)
146 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 95.3 0.019 1.4E-06 48.5 7.8 20 247-266 6-25 (170)
147 d1z08a1 c.37.1.8 (A:17-183) Ra 95.3 0.0063 4.6E-07 51.7 4.4 20 247-266 6-25 (167)
148 d1x3sa1 c.37.1.8 (A:2-178) Rab 95.3 0.0051 3.7E-07 52.9 3.8 20 247-266 10-29 (177)
149 d1uf9a_ c.37.1.1 (A:) Dephosph 95.3 0.0051 3.7E-07 53.5 3.8 27 247-274 6-32 (191)
150 d2qtvb1 c.37.1.8 (B:24-189) SA 95.3 0.004 2.9E-07 51.8 3.0 21 247-267 3-23 (166)
151 d2erya1 c.37.1.8 (A:10-180) r- 95.3 0.023 1.6E-06 48.2 8.0 20 247-266 8-27 (171)
152 d1h65a_ c.37.1.8 (A:) Chloropl 95.2 0.029 2.1E-06 51.3 9.0 23 245-267 33-55 (257)
153 d1upta_ c.37.1.8 (A:) ADP-ribo 95.2 0.0047 3.4E-07 51.8 3.0 22 246-267 7-28 (169)
154 d1kgda_ c.37.1.1 (A:) Guanylat 95.1 0.0069 5E-07 52.5 4.1 26 244-269 3-28 (178)
155 d2fh5b1 c.37.1.8 (B:63-269) Si 95.1 0.0048 3.5E-07 54.4 3.1 22 245-266 1-22 (207)
156 d2g6ba1 c.37.1.8 (A:58-227) Ra 95.1 0.016 1.2E-06 49.1 6.4 20 247-266 9-28 (170)
157 d2g9na1 c.37.1.19 (A:21-238) I 95.0 0.042 3E-06 48.9 9.3 52 207-261 12-66 (218)
158 d1c1ya_ c.37.1.8 (A:) Rap1A {H 95.0 0.034 2.5E-06 46.8 8.3 20 247-266 6-25 (167)
159 d1fzqa_ c.37.1.8 (A:) ADP-ribo 95.0 0.008 5.8E-07 51.3 4.1 21 246-266 18-38 (176)
160 d2gjsa1 c.37.1.8 (A:91-258) Ra 95.0 0.0077 5.6E-07 51.3 3.9 20 247-266 4-23 (168)
161 d2bcgy1 c.37.1.8 (Y:3-196) GTP 94.9 0.0099 7.2E-07 51.9 4.6 20 247-266 9-28 (194)
162 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 94.9 0.0065 4.8E-07 51.8 3.2 20 247-266 16-35 (186)
163 d1cr2a_ c.37.1.11 (A:) Gene 4 94.8 0.012 8.9E-07 54.1 5.3 39 240-278 31-73 (277)
164 d2erxa1 c.37.1.8 (A:6-176) di- 94.8 0.015 1.1E-06 49.3 5.5 20 247-266 5-24 (171)
165 d1e0sa_ c.37.1.8 (A:) ADP-ribo 94.8 0.0044 3.2E-07 53.0 1.9 21 246-266 14-34 (173)
166 d1s96a_ c.37.1.1 (A:) Guanylat 94.8 0.0088 6.4E-07 53.1 3.8 23 247-269 5-27 (205)
167 d1ko7a2 c.91.1.2 (A:130-298) H 94.8 0.0076 5.6E-07 51.8 3.2 29 244-273 15-43 (169)
168 d1uaaa1 c.37.1.19 (A:2-307) DE 94.7 0.0072 5.3E-07 56.3 3.3 34 246-279 16-56 (306)
169 d1knxa2 c.91.1.2 (A:133-309) H 94.7 0.008 5.8E-07 52.0 3.2 30 244-274 15-44 (177)
170 d2jdid3 c.37.1.11 (D:82-357) C 94.7 0.047 3.4E-06 50.4 8.8 22 247-268 71-92 (276)
171 d1xpua3 c.37.1.11 (A:129-417) 94.7 0.024 1.8E-06 52.7 6.8 27 242-268 39-67 (289)
172 d1jjva_ c.37.1.1 (A:) Dephosph 94.7 0.0065 4.7E-07 53.8 2.7 28 247-275 5-32 (205)
173 d1vhta_ c.37.1.1 (A:) Dephosph 94.7 0.0067 4.9E-07 53.9 2.8 27 247-274 6-32 (208)
174 d1u0la2 c.37.1.8 (A:69-293) Pr 94.6 0.0083 6E-07 54.0 3.3 31 245-275 96-126 (225)
175 d2p6ra3 c.37.1.19 (A:1-202) He 94.6 0.034 2.5E-06 48.5 7.5 17 245-261 41-57 (202)
176 d1s2ma1 c.37.1.19 (A:46-251) P 94.5 0.063 4.6E-06 47.1 9.0 49 208-259 2-53 (206)
177 d2j0sa1 c.37.1.19 (A:22-243) P 94.4 0.065 4.7E-06 47.8 9.0 52 205-259 15-69 (222)
178 d1mkya1 c.37.1.8 (A:2-172) Pro 94.4 0.0072 5.3E-07 51.5 2.3 22 246-267 2-23 (171)
179 d1qhla_ c.37.1.12 (A:) Cell di 94.4 0.0052 3.8E-07 53.0 1.2 24 247-270 27-50 (222)
180 d4tmka_ c.37.1.1 (A:) Thymidyl 94.4 0.0094 6.9E-07 52.7 3.1 22 247-268 5-26 (210)
181 d2cxxa1 c.37.1.8 (A:2-185) GTP 94.4 0.0062 4.5E-07 52.3 1.7 21 246-266 2-22 (184)
182 d1x1ra1 c.37.1.8 (A:10-178) Ra 94.4 0.041 3E-06 46.5 7.2 20 247-266 7-26 (169)
183 d1zd9a1 c.37.1.8 (A:18-181) AD 94.3 0.011 7.7E-07 50.0 3.0 21 246-266 4-24 (164)
184 d2vp4a1 c.37.1.1 (A:12-208) De 94.2 0.0076 5.5E-07 52.5 2.0 27 247-273 12-38 (197)
185 d2fu5c1 c.37.1.8 (C:3-175) Rab 94.2 0.014 1E-06 49.7 3.7 20 247-266 9-28 (173)
186 d1gsia_ c.37.1.1 (A:) Thymidyl 94.2 0.02 1.4E-06 50.1 4.7 31 247-277 3-36 (208)
187 d2atva1 c.37.1.8 (A:5-172) Ras 94.0 0.013 9.2E-07 49.8 3.1 20 247-266 5-24 (168)
188 d1svia_ c.37.1.8 (A:) Probable 94.0 0.0088 6.4E-07 52.1 1.9 20 247-266 26-45 (195)
189 g1f2t.1 c.37.1.12 (A:,B:) Rad5 93.9 0.013 9.4E-07 53.8 3.1 22 247-268 26-47 (292)
190 d1tmka_ c.37.1.1 (A:) Thymidyl 93.9 0.022 1.6E-06 50.6 4.6 32 247-278 6-37 (214)
191 d2f7sa1 c.37.1.8 (A:5-190) Rab 93.9 0.011 7.9E-07 51.0 2.3 20 247-266 8-27 (186)
192 d2gj8a1 c.37.1.8 (A:216-376) P 93.8 0.01 7.6E-07 49.6 2.1 20 247-266 4-23 (161)
193 d1ky3a_ c.37.1.8 (A:) Rab-rela 93.8 0.014 1E-06 49.6 3.1 20 247-266 5-24 (175)
194 d2p67a1 c.37.1.10 (A:1-327) LA 93.8 0.013 9.5E-07 55.9 2.9 34 247-280 57-95 (327)
195 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 93.7 0.016 1.2E-06 49.8 3.1 20 247-266 5-24 (184)
196 d1deka_ c.37.1.1 (A:) Deoxynuc 93.6 0.014 1E-06 52.6 2.6 27 247-273 4-30 (241)
197 d1z06a1 c.37.1.8 (A:32-196) Ra 93.6 0.017 1.3E-06 48.5 3.1 20 247-266 5-24 (165)
198 d1qdea_ c.37.1.19 (A:) Initiat 93.5 0.088 6.4E-06 46.5 7.9 52 207-261 10-64 (212)
199 d1pjra1 c.37.1.19 (A:1-318) DE 93.5 0.018 1.3E-06 54.0 3.3 34 246-279 26-66 (318)
200 d2qm8a1 c.37.1.10 (A:5-327) Me 93.4 0.019 1.3E-06 54.7 3.3 33 247-279 54-91 (323)
201 d1wmsa_ c.37.1.8 (A:) Rab9a {H 93.3 0.021 1.5E-06 48.6 3.1 20 247-266 9-28 (174)
202 d1wf3a1 c.37.1.8 (A:3-180) GTP 93.2 0.017 1.2E-06 49.4 2.5 22 246-267 7-28 (178)
203 g1ii8.1 c.37.1.12 (A:,B:) Rad5 93.2 0.017 1.3E-06 53.9 2.7 22 247-268 26-47 (369)
204 d1xtqa1 c.37.1.8 (A:3-169) GTP 93.2 0.018 1.3E-06 48.6 2.6 21 246-266 6-26 (167)
205 g1xew.1 c.37.1.12 (X:,Y:) Smc 93.1 0.015 1.1E-06 54.7 2.2 24 246-269 27-51 (329)
206 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 93.0 0.019 1.4E-06 49.0 2.5 23 245-267 3-25 (177)
207 d2ocpa1 c.37.1.1 (A:37-277) De 93.0 0.029 2.1E-06 50.2 3.8 30 244-273 2-31 (241)
208 d1mh1a_ c.37.1.8 (A:) Rac {Hum 92.5 0.029 2.1E-06 48.1 3.0 21 246-266 7-27 (183)
209 d1egaa1 c.37.1.8 (A:4-182) GTP 92.5 0.025 1.8E-06 48.0 2.4 20 247-266 8-27 (179)
210 d1xzpa2 c.37.1.8 (A:212-371) T 92.5 0.0096 7E-07 49.8 -0.3 21 247-267 3-23 (160)
211 d1mkya2 c.37.1.8 (A:173-358) P 92.5 0.025 1.8E-06 48.4 2.5 20 247-266 11-30 (186)
212 d1e9ra_ c.37.1.11 (A:) Bacteri 92.4 0.041 3E-06 53.8 4.4 34 245-278 51-87 (433)
213 d2g3ya1 c.37.1.8 (A:73-244) GT 92.4 0.03 2.2E-06 47.6 2.9 20 247-266 6-25 (172)
214 d1moza_ c.37.1.8 (A:) ADP-ribo 92.4 0.018 1.3E-06 49.4 1.3 21 246-266 19-39 (182)
215 d1p5zb_ c.37.1.1 (B:) Deoxycyt 92.3 0.015 1.1E-06 52.1 0.7 25 246-270 4-28 (241)
216 d1e69a_ c.37.1.12 (A:) Smc hea 92.3 0.02 1.4E-06 53.4 1.6 24 247-270 27-50 (308)
217 d1a7ja_ c.37.1.6 (A:) Phosphor 92.3 0.028 2.1E-06 52.3 2.7 35 246-280 6-43 (288)
218 d1lnza2 c.37.1.8 (A:158-342) O 92.3 0.023 1.7E-06 48.7 2.0 21 246-266 3-23 (185)
219 d1i2ma_ c.37.1.8 (A:) Ran {Hum 92.2 0.015 1.1E-06 49.4 0.7 21 246-266 5-25 (170)
220 d2atxa1 c.37.1.8 (A:9-193) Rho 92.0 0.034 2.4E-06 47.9 2.7 20 247-266 12-31 (185)
221 d1m7ba_ c.37.1.8 (A:) RhoE (RN 92.0 0.033 2.4E-06 47.7 2.6 21 246-266 4-24 (179)
222 d1puia_ c.37.1.8 (A:) Probable 91.8 0.019 1.4E-06 48.8 0.8 21 246-266 18-38 (188)
223 d2jdia3 c.37.1.11 (A:95-379) C 91.6 0.29 2.1E-05 45.1 9.0 21 247-267 71-91 (285)
224 d1t9ha2 c.37.1.8 (A:68-298) Pr 91.6 0.011 8.1E-07 53.3 -1.0 30 246-275 99-128 (231)
225 d2ngra_ c.37.1.8 (A:) CDC42 {H 91.6 0.039 2.8E-06 47.7 2.6 20 247-266 6-25 (191)
226 d1udxa2 c.37.1.8 (A:157-336) O 91.4 0.031 2.3E-06 47.7 1.8 21 246-266 3-23 (180)
227 d1ihua1 c.37.1.10 (A:1-296) Ar 91.4 0.093 6.8E-06 48.1 5.3 47 243-292 7-56 (296)
228 d1w1wa_ c.37.1.12 (A:) Smc hea 90.9 0.053 3.8E-06 52.4 3.2 24 247-270 28-51 (427)
229 d1fx0a3 c.37.1.11 (A:97-372) C 90.5 0.5 3.7E-05 43.2 9.5 60 247-306 70-135 (276)
230 d1yksa1 c.37.1.14 (A:185-324) 90.3 0.043 3.2E-06 44.0 1.5 17 245-261 8-24 (140)
231 d1zcba2 c.37.1.8 (A:47-75,A:20 90.2 0.062 4.5E-06 46.2 2.7 19 247-265 5-23 (200)
232 d2fz4a1 c.37.1.19 (A:24-229) D 90.2 0.1 7.5E-06 45.6 4.1 31 246-276 87-117 (206)
233 d2bmja1 c.37.1.8 (A:66-240) Ce 90.0 0.078 5.7E-06 45.2 3.1 22 246-267 7-28 (175)
234 d1gm5a3 c.37.1.19 (A:286-549) 89.6 0.94 6.8E-05 41.0 10.4 38 243-280 103-143 (264)
235 d2b8ta1 c.37.1.24 (A:11-149) T 89.5 0.45 3.2E-05 38.8 7.4 61 247-307 5-91 (139)
236 d1azta2 c.37.1.8 (A:35-65,A:20 88.8 0.091 6.6E-06 46.5 2.7 21 246-266 8-28 (221)
237 d1byia_ c.37.1.10 (A:) Dethiob 88.6 0.15 1.1E-05 44.2 4.0 33 245-277 2-38 (224)
238 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 87.5 0.12 9E-06 44.0 2.6 22 246-267 4-25 (200)
239 d1p6xa_ c.37.1.1 (A:) Thymidin 87.4 0.12 8.9E-06 48.9 2.7 24 247-270 9-32 (333)
240 d1nija1 c.37.1.10 (A:2-223) Hy 87.3 0.097 7.1E-06 46.5 1.8 22 246-267 5-26 (222)
241 d1ihua2 c.37.1.10 (A:308-586) 86.1 0.31 2.3E-05 44.0 4.8 46 245-293 21-69 (279)
242 d1wp9a1 c.37.1.19 (A:1-200) pu 86.1 0.22 1.6E-05 42.7 3.5 22 245-266 24-45 (200)
243 d1wb1a4 c.37.1.8 (A:1-179) Elo 85.3 0.16 1.2E-05 43.1 2.1 21 246-266 7-27 (179)
244 d2eyqa3 c.37.1.19 (A:546-778) 85.2 0.45 3.3E-05 42.4 5.2 39 242-280 74-115 (233)
245 d1t5la1 c.37.1.19 (A:2-414) Nu 84.4 0.93 6.8E-05 43.8 7.6 34 246-279 33-66 (413)
246 d1svsa1 c.37.1.8 (A:32-60,A:18 84.3 0.22 1.6E-05 42.0 2.7 20 247-266 5-24 (195)
247 d1tq4a_ c.37.1.8 (A:) Interfer 84.1 0.38 2.8E-05 46.5 4.5 22 245-266 57-78 (400)
248 d1cp2a_ c.37.1.10 (A:) Nitroge 83.9 0.42 3.1E-05 43.0 4.5 35 246-280 3-40 (269)
249 d1osna_ c.37.1.1 (A:) Thymidin 83.8 0.18 1.3E-05 47.7 1.8 25 247-271 8-32 (331)
250 d2bv3a2 c.37.1.8 (A:7-282) Elo 83.5 0.27 2E-05 45.0 3.0 26 244-269 6-31 (276)
251 d2dy1a2 c.37.1.8 (A:8-274) Elo 83.4 0.27 2E-05 44.8 2.9 25 245-269 3-27 (267)
252 d1j3ba1 c.91.1.1 (A:212-529) P 83.2 0.18 1.3E-05 47.2 1.5 17 246-262 16-32 (318)
253 d2olra1 c.91.1.1 (A:228-540) P 80.9 0.28 2.1E-05 45.5 2.0 17 246-262 16-32 (313)
254 d1e2ka_ c.37.1.1 (A:) Thymidin 80.7 0.31 2.3E-05 45.8 2.3 25 247-271 7-31 (329)
255 d1bg2a_ c.37.1.9 (A:) Kinesin 80.1 0.54 3.9E-05 43.9 3.8 49 208-261 45-93 (323)
256 d1g7sa4 c.37.1.8 (A:1-227) Ini 80.0 0.49 3.6E-05 41.6 3.3 22 247-268 8-29 (227)
257 d1hyqa_ c.37.1.10 (A:) Cell di 79.6 0.85 6.2E-05 39.5 4.8 33 247-279 4-40 (232)
258 d2axpa1 c.37.1.1 (A:2-165) Hyp 78.4 1.6 0.00012 33.3 5.3 58 247-304 3-62 (164)
259 d2afhe1 c.37.1.10 (E:1-289) Ni 78.2 0.87 6.3E-05 41.3 4.5 35 246-280 4-41 (289)
260 d1ii2a1 c.91.1.1 (A:201-523) P 78.1 0.4 2.9E-05 44.7 2.0 17 246-262 16-32 (323)
261 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 78.1 0.5 3.6E-05 47.7 3.1 33 246-278 26-65 (623)
262 d1goja_ c.37.1.9 (A:) Kinesin 78.1 0.8 5.8E-05 43.2 4.4 16 246-261 82-97 (354)
263 d1gkub1 c.37.1.16 (B:1-250) He 78.0 0.42 3.1E-05 42.2 2.2 22 245-266 59-80 (237)
264 d1g3qa_ c.37.1.10 (A:) Cell di 77.7 1.1 7.8E-05 38.9 4.9 33 246-278 4-40 (237)
265 d1t6na_ c.37.1.19 (A:) Spliceo 77.6 0.28 2E-05 42.8 0.8 49 208-259 2-53 (207)
266 d1c4oa1 c.37.1.19 (A:2-409) Nu 75.6 3.1 0.00022 39.9 8.0 33 246-278 30-62 (408)
267 d1f9va_ c.37.1.9 (A:) Kinesin 75.4 0.96 7E-05 42.4 4.0 47 209-261 54-100 (342)
268 d1ry6a_ c.37.1.9 (A:) Kinesin 75.1 0.7 5.1E-05 43.2 2.9 17 246-262 87-103 (330)
269 d1sdma_ c.37.1.9 (A:) Kinesin 74.8 0.75 5.5E-05 43.7 3.1 17 245-261 76-92 (364)
270 d2bmfa2 c.37.1.14 (A:178-482) 74.5 0.57 4.2E-05 42.5 2.1 17 243-259 8-24 (305)
271 d1puja_ c.37.1.8 (A:) Probable 74.3 1.2 9E-05 40.2 4.4 21 247-267 115-135 (273)
272 d2c78a3 c.37.1.8 (A:9-212) Elo 73.3 0.83 6E-05 39.5 2.8 23 246-268 5-27 (204)
273 d1q0ua_ c.37.1.19 (A:) Probabl 72.5 0.32 2.3E-05 42.1 -0.3 49 208-259 2-53 (209)
274 d1veca_ c.37.1.19 (A:) DEAD bo 72.3 0.38 2.7E-05 41.9 0.1 50 207-259 3-55 (206)
275 d1x88a1 c.37.1.9 (A:18-362) Ki 72.0 1.2 8.6E-05 41.8 3.7 17 245-261 82-98 (345)
276 d1hv8a1 c.37.1.19 (A:3-210) Pu 72.0 0.9 6.6E-05 39.2 2.7 55 208-265 5-63 (208)
277 d1xbta1 c.37.1.24 (A:18-150) T 71.6 4.2 0.0003 32.3 6.6 32 247-278 5-39 (133)
278 d1v8ka_ c.37.1.9 (A:) Kinesin 71.5 1.2 8.7E-05 42.1 3.7 16 246-261 116-131 (362)
279 d2ncda_ c.37.1.9 (A:) Kinesin 71.1 1.4 0.0001 41.8 4.1 17 245-261 126-142 (368)
280 d1g8fa3 c.37.1.15 (A:390-511) 70.6 1.4 0.0001 34.7 3.3 22 247-268 9-30 (122)
281 d1ni3a1 c.37.1.8 (A:11-306) Yc 69.2 1.1 7.7E-05 41.1 2.6 30 247-276 13-47 (296)
282 d1c9ka_ c.37.1.11 (A:) Adenosy 66.6 1.2 9E-05 37.7 2.3 31 247-278 2-32 (180)
283 d1jala1 c.37.1.8 (A:1-278) Ych 66.1 1.5 0.00011 39.5 3.1 29 247-275 5-37 (278)
284 d1wxqa1 c.37.1.8 (A:1-319) GTP 65.4 1.3 9.2E-05 40.8 2.3 20 247-266 3-22 (319)
285 d1w36b1 c.37.1.19 (B:1-485) Ex 64.7 2 0.00015 41.1 3.9 28 241-268 13-41 (485)
286 d1xx6a1 c.37.1.24 (A:2-142) Th 64.6 3.7 0.00027 33.1 4.8 32 245-276 6-42 (141)
287 d1n0ua2 c.37.1.8 (A:3-343) Elo 64.5 1.4 0.0001 41.4 2.4 25 245-269 18-42 (341)
288 d2akab1 c.37.1.8 (B:6-304) Dyn 59.3 2 0.00014 38.9 2.4 21 246-266 28-48 (299)
289 d1jwyb_ c.37.1.8 (B:) Dynamin 59.0 1.8 0.00013 39.4 2.1 22 246-267 26-47 (306)
290 d2zfia1 c.37.1.9 (A:4-352) Kin 57.2 3.4 0.00025 38.5 3.8 17 245-261 88-104 (349)
291 d1oywa2 c.37.1.19 (A:1-206) Re 55.4 3 0.00022 35.2 2.9 19 245-263 41-59 (206)
292 d2qn6a3 c.37.1.8 (A:2-206) Ini 54.9 2.6 0.00019 35.9 2.4 21 246-266 10-30 (205)
293 d1rifa_ c.37.1.23 (A:) DNA hel 54.0 6.7 0.00048 35.2 5.2 23 246-268 130-152 (282)
294 d1lkxa_ c.37.1.9 (A:) Myosin S 52.6 3.5 0.00025 42.3 3.2 23 246-268 88-110 (684)
295 d1f5na2 c.37.1.8 (A:7-283) Int 52.0 2.2 0.00016 38.6 1.4 21 247-267 35-55 (277)
296 d1d0xa2 c.37.1.9 (A:2-33,A:80- 51.6 3.7 0.00027 42.3 3.2 23 246-268 127-149 (712)
297 d1zunb3 c.37.1.8 (B:16-237) Su 50.9 4.9 0.00036 34.8 3.5 25 246-270 11-35 (222)
298 d1g5ta_ c.37.1.11 (A:) ATP:cor 49.8 59 0.0043 26.0 11.8 40 347-395 113-152 (157)
299 d1z63a1 c.37.1.19 (A:432-661) 49.5 16 0.0012 31.0 6.9 24 245-268 32-55 (230)
300 d1br2a2 c.37.1.9 (A:80-789) My 49.1 4.2 0.00031 41.8 3.2 23 246-268 93-115 (710)
301 d1d2ea3 c.37.1.8 (A:55-250) El 49.1 5.1 0.00037 34.0 3.2 23 245-267 4-26 (196)
302 d2mysa2 c.37.1.9 (A:4-33,A:80- 47.9 4.1 0.0003 42.5 2.9 23 246-268 125-147 (794)
303 d1w1wa_ c.37.1.12 (A:) Smc hea 47.6 6.8 0.00049 36.5 4.3 29 51-82 24-52 (427)
304 d1rw1a_ c.47.1.12 (A:) Hypothe 46.9 14 0.00099 28.0 5.3 47 247-293 2-49 (114)
305 d1kk1a3 c.37.1.8 (A:6-200) Ini 46.8 4.4 0.00032 33.9 2.5 21 246-266 7-27 (195)
306 d1kk8a2 c.37.1.9 (A:1-28,A:77- 46.6 4.8 0.00035 41.9 3.2 24 245-268 122-145 (789)
307 d1wrba1 c.37.1.19 (A:164-401) 46.5 3.9 0.00028 35.8 2.1 23 245-267 59-83 (238)
308 d1f60a3 c.37.1.8 (A:2-240) Elo 45.7 6.4 0.00046 34.5 3.4 25 246-270 8-32 (239)
309 d1w7ja2 c.37.1.9 (A:63-792) My 45.0 5.4 0.00039 41.1 3.2 24 245-268 95-118 (730)
310 g1f2t.1 c.37.1.12 (A:,B:) Rad5 44.1 10 0.00075 32.9 4.7 48 294-379 224-271 (292)
311 d1e69a_ c.37.1.12 (A:) Smc hea 43.2 15 0.0011 32.4 5.8 28 50-80 22-49 (308)
312 d1jnya3 c.37.1.8 (A:4-227) Elo 42.1 6.9 0.0005 33.6 3.0 25 245-269 4-28 (224)
313 d1sxjc1 a.80.1.1 (C:239-333) R 41.1 19 0.0014 26.1 5.2 44 397-440 1-44 (95)
314 d1h75a_ c.47.1.1 (A:) Glutared 41.0 17 0.0012 25.1 4.6 54 247-303 3-58 (76)
315 d1r7ha_ c.47.1.1 (A:) Glutared 38.7 20 0.0015 24.4 4.7 54 247-303 3-58 (74)
316 g1ii8.1 c.37.1.12 (A:,B:) Rad5 38.1 23 0.0017 31.0 6.4 28 50-80 21-48 (369)
317 d1fova_ c.47.1.1 (A:) Glutared 33.8 49 0.0036 22.7 6.3 35 246-280 2-36 (82)
318 d1fada_ a.77.1.2 (A:) FADD (Mo 33.2 45 0.0033 23.8 6.2 59 419-478 22-80 (95)
319 d1nm3a1 c.47.1.1 (A:166-239) C 32.2 42 0.0031 22.7 5.6 58 245-303 5-62 (74)
320 d1r5ba3 c.37.1.8 (A:215-459) E 31.9 8.6 0.00062 33.7 1.9 26 244-269 24-49 (245)
321 d1qzma_ c.37.1.20 (A:) ATPase 30.9 39 0.0028 24.5 5.4 53 396-458 2-64 (94)
322 d1kjwa2 c.37.1.1 (A:526-724) G 28.6 21 0.0016 29.7 4.0 27 242-271 7-33 (199)
323 d1t0hb_ c.37.1.1 (B:) Guanylat 28.2 1.1E+02 0.0082 25.2 8.2 109 346-461 88-199 (219)
324 d1o5za2 c.72.2.2 (A:-2-293) Fo 27.8 16 0.0011 32.6 3.0 37 237-274 34-74 (296)
325 d1z3ea1 c.47.1.12 (A:1-114) Re 24.6 79 0.0057 23.4 6.4 47 248-294 3-50 (114)
326 d1khba1 c.91.1.1 (A:260-622) C 23.1 13 0.00094 34.3 1.4 19 246-264 18-38 (363)
327 d2gc6a2 c.72.2.2 (A:1-296) Fol 22.5 21 0.0015 31.7 2.8 26 249-274 41-70 (296)
328 d1le8a_ a.4.1.1 (A:) Mating ty 22.3 58 0.0043 20.7 4.4 42 398-440 5-46 (53)
329 d1j9ba_ c.47.1.12 (A:) Arsenat 20.6 85 0.0062 24.1 6.0 48 247-294 2-50 (138)
No 1
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.1e-36 Score=294.49 Aligned_cols=237 Identities=21% Similarity=0.305 Sum_probs=176.6
Q ss_pred cCCCccccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeeccc---
Q 041423 204 EHPATFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAV--- 280 (500)
Q Consensus 204 ~~~~~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~--- 280 (500)
..+.||++|+|.+++|++|.+.+ .|+..++.|.+.|..+++|+|||||||||||++|+++|++++.+++.++++.+
T Consensus 6 ~~~~t~~Di~Gl~~~k~~l~e~v-~~~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~~~~~~~i~~~~l~~~ 84 (256)
T d1lv7a_ 6 QIKTTFADVAGCDEAKEEVAELV-EYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEM 84 (256)
T ss_dssp SSCCCGGGSCSCHHHHHHTHHHH-HHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECSCSSTTS
T ss_pred CCCCCHHHHhchHHHHHHHHHHH-HHHHCHHHHHHcCCCCCCeEEeeCCCCCCccHHHHHHHHHcCCCEEEEEhHHhhhc
Confidence 34568999999999999997754 67889999999999999999999999999999999999999999999999887
Q ss_pred ---CChHHHHHHHHhh--cCCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCCCCCCcchhcHhHHHHHH
Q 041423 281 ---KDNTELRKLLIET--TSKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTLSGLLNFI 355 (500)
Q Consensus 281 ---~~~~~l~~l~~~~--~~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~lL~~l 355 (500)
.+...++++|..+ .+||||||||||.++..++... ..........++.||+.+
T Consensus 85 ~~g~~~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~----------------------~~~~~~~~~~~~~ll~~~ 142 (256)
T d1lv7a_ 85 FVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGL----------------------GGGHDEREQTLNQMLVEM 142 (256)
T ss_dssp CCCCCHHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTS----------------------CCTTCHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCC----------------------CCCcHHHHHHHHHHHHHh
Confidence 3567889999776 4689999999999763221110 002233456789999999
Q ss_pred hhhhhccCCCeEEEEEcCCcCcccHHHhcCCeeeEEEEccCCCHHHHHHHHHHhhccccchhHHHHHHHhh-cCCCCHHH
Q 041423 356 DGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNYLNVETHTLFETIQKLME-DTKITPAD 434 (500)
Q Consensus 356 dg~~~~~~~~~ivI~TTN~~~~lD~aLlr~GR~d~~I~~~~p~~~~~~~l~~~~l~~~~~~l~~~i~~l~~-~~~~spa~ 434 (500)
|++.+ ..+++||+|||+++.|||||+||||||.+|+|++|+.++|.+|++.++.........++..+.+ ..++|++|
T Consensus 143 d~~~~--~~~v~vIatTn~~~~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~~~~~~~~~~la~~t~G~s~ad 220 (256)
T d1lv7a_ 143 DGFEG--NEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGAD 220 (256)
T ss_dssp HTCCS--SSCEEEEEEESCTTTSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHH
T ss_pred hCCCC--CCCEEEEEeCCCcccCCHhHcCCCCCCEEEECCCcCHHHHHHHHHHhccCCCcCcccCHHHHHHhCCCCCHHH
Confidence 99854 3568999999999999999999999999999999999999999999986543321111222322 23555555
Q ss_pred HHHHhCCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 041423 435 VAENLMPKSPSDNVEKCLSSLIQALKEGKEEAERKQAEEERKQ 477 (500)
Q Consensus 435 i~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 477 (500)
|. ..|.++.+.++++.+.....++.+.+++.
T Consensus 221 i~------------~l~~~A~~~a~~~~~~~i~~~d~~~Al~r 251 (256)
T d1lv7a_ 221 LA------------NLVNEAALFAARGNKRVVSMVEFEKAKDK 251 (256)
T ss_dssp HH------------HHHHHHHHHHHHTTCSSBCHHHHHHHHHH
T ss_pred HH------------HHHHHHHHHHHHcCCCccCHHHHHHHHHH
Confidence 54 44555666666655544445555555444
No 2
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=1.2e-36 Score=292.92 Aligned_cols=224 Identities=24% Similarity=0.327 Sum_probs=170.8
Q ss_pred cCCCccccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecccC--
Q 041423 204 EHPATFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVK-- 281 (500)
Q Consensus 204 ~~~~~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~~-- 281 (500)
.|+.+|++|+|.+++|+.|.+ +..++.+++.|.+.|.++++|+|||||||||||++|+++|++++.+++.++++.+.
T Consensus 3 ~p~~~~~di~G~~~~k~~l~~-~i~~l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~~~~~~~i~~~~l~~~ 81 (247)
T d1ixza_ 3 APKVTFKDVAGAEEAKEELKE-IVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEM 81 (247)
T ss_dssp CCSCCGGGCCSCHHHHHHHHH-HHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHTTCCEEEEEHHHHHHS
T ss_pred CCCCcHHHHccHHHHHHHHHH-HHHHHHCHHHHHHcCCCCCceEEEecCCCCChhHHHHHHHHHcCCCEEEEEhHHhhhc
Confidence 355699999999999999854 66789999999999999999999999999999999999999999999999988762
Q ss_pred ----ChHHHHHHHHhh--cCCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCCCCCCcchhcHhHHHHHH
Q 041423 282 ----DNTELRKLLIET--TSKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTLSGLLNFI 355 (500)
Q Consensus 282 ----~~~~l~~l~~~~--~~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~lL~~l 355 (500)
+...++++|..+ .+||||||||||.++. .+.... ..........++.||+.|
T Consensus 82 ~~g~~~~~l~~~f~~a~~~~p~Ii~iDeid~l~~---~r~~~~-------------------~~~~~~~~~~~~~ll~~~ 139 (247)
T d1ixza_ 82 FVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGR---KRGSGV-------------------GGGNDEREQTLNQLLVEM 139 (247)
T ss_dssp CTTHHHHHHHHHHHHHTTSSSEEEEEETHHHHHC-------------------------------CHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHcCCEEEEEEChhhhCc---cCCCCC-------------------CCCcHHHHHHHHHHHHHh
Confidence 346688888776 4799999999999753 221100 001223456789999999
Q ss_pred hhhhhccCCCeEEEEEcCCcCcccHHHhcCCeeeEEEEccCCCHHHHHHHHHHhhccccchhHHHHHHHhh-cCCCCHHH
Q 041423 356 DGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNYLNVETHTLFETIQKLME-DTKITPAD 434 (500)
Q Consensus 356 dg~~~~~~~~~ivI~TTN~~~~lD~aLlr~GR~d~~I~~~~p~~~~~~~l~~~~l~~~~~~l~~~i~~l~~-~~~~spa~ 434 (500)
|++.. ..+++||+|||+++.|||+|+||||||.+|+|++|+.++|++|++.|+..........+..+.+ ..++|++|
T Consensus 140 d~~~~--~~~vivi~tTn~~~~ld~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~~~~~~~~~~la~~t~g~s~~d 217 (247)
T d1ixza_ 140 DGFEK--DTAIVVMAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGAD 217 (247)
T ss_dssp HTCCT--TCCEEEEEEESCGGGSCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHH
T ss_pred hCCCC--CCCEEEEEeCCCccccCHhHcCCCCCcEEEEECCcCHHHHHHHHHHHhcccCCccccCHHHHHHHCCCCCHHH
Confidence 99854 3458889999999999999999999999999999999999999999996543221111223333 23566666
Q ss_pred HHHHhCCCCCCCcHHHHHHHHHHHHHHhHH
Q 041423 435 VAENLMPKSPSDNVEKCLSSLIQALKEGKE 464 (500)
Q Consensus 435 i~~~l~~~~~~~~~~~~~~~l~~~l~~~~~ 464 (500)
|.. .|.++...++++.++
T Consensus 218 i~~------------lv~~A~l~a~~~~~~ 235 (247)
T d1ixza_ 218 LEN------------LLNEAALLAAREGRR 235 (247)
T ss_dssp HHH------------HHHHHHHHHHHTTCS
T ss_pred HHH------------HHHHHHHHHHHcCCC
Confidence 544 445555556555433
No 3
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=9.9e-36 Score=288.97 Aligned_cols=219 Identities=24% Similarity=0.343 Sum_probs=174.7
Q ss_pred ccccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecccC------
Q 041423 208 TFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVK------ 281 (500)
Q Consensus 208 ~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~~------ 281 (500)
+|++|+|.+..|++|.+.+..++.+++.|.+.|+++++|+|||||||||||++++++|++++.+++.++++.+.
T Consensus 2 ~~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~~~~~~~~i~~~~l~~~~~g~ 81 (258)
T d1e32a2 2 GYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGE 81 (258)
T ss_dssp CGGGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHHTTCEEEEECHHHHTTSCTTH
T ss_pred ChhhhccHHHHHHHHHHHHHHHhcCHHHHHhCCCCCCceeEEecCCCCCchHHHHHHHHHhCCeEEEEEchhhccccccc
Confidence 69999999999999999999999999999999999999999999999999999999999999999999988763
Q ss_pred ChHHHHHHHHhh--cCCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCCCCCCcchhcHhHHHHHHhhhh
Q 041423 282 DNTELRKLLIET--TSKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTLSGLLNFIDGLW 359 (500)
Q Consensus 282 ~~~~l~~l~~~~--~~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~lL~~ldg~~ 359 (500)
....++.+|..+ .+||||+|||+|.++. .+... ........++.+++.+++..
T Consensus 82 ~~~~l~~~f~~A~~~~p~il~iDeid~l~~---~r~~~----------------------~~~~~~~~~~~~~~~~~~~~ 136 (258)
T d1e32a2 82 SESNLRKAFEEAEKNAPAIIFIDELDAIAP---KREKT----------------------HGEVERRIVSQLLTLMDGLK 136 (258)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESSGGGTCC---HHHHC----------------------CCTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHhcCCeEEEehhhhhhcc---CCCCC----------------------CCchHHHHHHHhcccccccc
Confidence 345677887665 5799999999999752 22110 23344567888888888874
Q ss_pred hccCCCeEEEEEcCCcCcccHHHhcCCeeeEEEEccCCCHHHHHHHHHHhhccccchhHHHHHHHhhcCCCCHHHHHHHh
Q 041423 360 SACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNYLNVETHTLFETIQKLMEDTKITPADVAENL 439 (500)
Q Consensus 360 ~~~~~~~ivI~TTN~~~~lD~aLlr~GR~d~~I~~~~p~~~~~~~l~~~~l~~~~~~l~~~i~~l~~~~~~spa~i~~~l 439 (500)
. ..+++||+|||+++.||||++||||||.+|++++|+.++|+.|++.++....... ++...+|++.+
T Consensus 137 ~--~~~vlvi~tTn~~~~ld~al~r~gRfd~~i~~~~P~~~~R~~il~~~l~~~~~~~-----------~~~~~~la~~t 203 (258)
T d1e32a2 137 Q--RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLAD-----------DVDLEQVANET 203 (258)
T ss_dssp C--SSCEEEEEEESCGGGSCGGGTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSCBCT-----------TCCHHHHHHHC
T ss_pred c--cCCccEEEeCCCccccchhhhhcccccceeECCCCCHHHHHHHhhhhccCccccc-----------ccchhhhhhcc
Confidence 4 4568999999999999999999999999999999999999999999996533211 23334444444
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhHH
Q 041423 440 MPKSPSDNVEKCLSSLIQALKEGKE 464 (500)
Q Consensus 440 ~~~~~~~~~~~~~~~l~~~l~~~~~ 464 (500)
.++++++....|.++.+.++++.+.
T Consensus 204 ~G~s~adl~~lv~~A~~~a~~~~~~ 228 (258)
T d1e32a2 204 HGHVGADLAALCSEAALQAIRKKMD 228 (258)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHhhcc
Confidence 4444444455566666677765443
No 4
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=4.4e-35 Score=285.30 Aligned_cols=224 Identities=21% Similarity=0.315 Sum_probs=175.3
Q ss_pred CCccccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeeccc-----
Q 041423 206 PATFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAV----- 280 (500)
Q Consensus 206 ~~~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~----- 280 (500)
..+|++|+|.+++|++|.+.+..++.+++.|.+.|+++++|+|||||||||||++++++|++++.+++.++++.+
T Consensus 3 ~~~f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~~ala~~~~~~~~~~~~~~l~~~~~ 82 (265)
T d1r7ra3 3 QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF 82 (265)
T ss_dssp CCSCSSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHHHHHTTCEEEEECHHHHHTSCT
T ss_pred CCCHHHhcCHHHHHHHHHHHHHHHhhCHHHHHhCCCCCCCeEEEECCCCCcchhHHHHHHHHhCCcEEEEEHHHhhhccc
Confidence 458999999999999999999999999999999999999999999999999999999999999999999988775
Q ss_pred -CChHHHHHHHHhh--cCCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCCCCCCcchhcHhHHHHHHhh
Q 041423 281 -KDNTELRKLLIET--TSKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTLSGLLNFIDG 357 (500)
Q Consensus 281 -~~~~~l~~l~~~~--~~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~lL~~ldg 357 (500)
.....++.+|..+ ..||||+|||+|.++. .+.... ..........++.|++.+|+
T Consensus 83 ~~~~~~l~~~f~~A~~~~p~il~ideid~l~~---~~~~~~-------------------~~~~~~~~~~~~~ll~~l~~ 140 (265)
T d1r7ra3 83 GESEANVREIFDKARQAAPCVLFFDELDSIAK---ARGGNI-------------------GDGGGAADRVINQILTEMDG 140 (265)
T ss_dssp TTHHHHHHHHHHHHHHTCSEEEEESSGGGTCC---HHHHCC-------------------CTTHHHHHHHHHHHHHTCC-
T ss_pred cchHHHHHHHHHHHHhcCCcceeHHhhhhccc---cCCCcC-------------------CCCcHHHHHHHHHHHHHhhC
Confidence 2346678888654 5799999999999763 111100 00122334578899999999
Q ss_pred hhhccCCCeEEEEEcCCcCcccHHHhcCCeeeEEEEccCCCHHHHHHHHHHhhccccchhHHHHHHHhhcCCCCHHHHHH
Q 041423 358 LWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNYLNVETHTLFETIQKLMEDTKITPADVAE 437 (500)
Q Consensus 358 ~~~~~~~~~ivI~TTN~~~~lD~aLlr~GR~d~~I~~~~p~~~~~~~l~~~~l~~~~~~l~~~i~~l~~~~~~spa~i~~ 437 (500)
+... .+++||+|||+++.|||||+||||||.+|+|++|+.++|.+|++.++..... ..++...+|+.
T Consensus 141 ~~~~--~~v~vi~ttn~~~~ld~al~r~gRf~~~i~~~~p~~~~R~~il~~~l~~~~~-----------~~~~~l~~la~ 207 (265)
T d1r7ra3 141 MSTK--KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPV-----------AKDVDLEFLAK 207 (265)
T ss_dssp -------CCEEEECCBSCTTTSCGGGSSTTSEEEEECCCCCCHHHHHHHHHHTTCC---------------CCCCHHHHH
T ss_pred cCCC--CCEEEEEeCCCchhCCHHHhCCCCccEEEEecchHHHHHHHHHHHHhccCCc-----------hhhhhHHHHHh
Confidence 8653 4589999999999999999999999999999999999999999999864211 01344566777
Q ss_pred HhCCCCCCCcHHHHHHHHHHHHHHhHH
Q 041423 438 NLMPKSPSDNVEKCLSSLIQALKEGKE 464 (500)
Q Consensus 438 ~l~~~~~~~~~~~~~~~l~~~l~~~~~ 464 (500)
.+.++++++....|.++...++++...
T Consensus 208 ~t~g~s~~di~~lv~~A~~~A~~~~~~ 234 (265)
T d1r7ra3 208 MTNGFSGADLTEICQRACKLAIRESIE 234 (265)
T ss_dssp HHCSSCCHHHHHHHHHHHHHHHHHC--
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 777777777777777787777766543
No 5
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.87 E-value=1.9e-22 Score=193.21 Aligned_cols=167 Identities=17% Similarity=0.177 Sum_probs=121.4
Q ss_pred cccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecccC-------Ch
Q 041423 211 TMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVK-------DN 283 (500)
Q Consensus 211 ~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~~-------~~ 283 (500)
.+++..+..+.+++++..+.... ......+++|+|||||||||||++|++||++++.+++.+++++.- ..
T Consensus 10 ~~i~~~~~i~~i~~~~~~~~~~~---~~~~~~p~~~vLL~GppGtGKT~la~alA~~~~~~~~~i~~~~~~~g~~~~~~~ 86 (246)
T d1d2na_ 10 GIIKWGDPVTRVLDDGELLVQQT---KNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKC 86 (246)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHH---HHCSSCSEEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEECGGGCTTCCHHHHH
T ss_pred CCcCcCHHHHHHHHHHHHHHHHH---hccCCCCCeEEEEECcCCCCHHHHHHHHhhcccccccccccccccccccccchh
Confidence 35666677788888888777642 222334568999999999999999999999999999999876531 12
Q ss_pred HHHHHHHHhhc--CCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCCCCCCcchhcHhHHHHHHhhhhhc
Q 041423 284 TELRKLLIETT--SKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTLSGLLNFIDGLWSA 361 (500)
Q Consensus 284 ~~l~~l~~~~~--~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~lL~~ldg~~~~ 361 (500)
..++.+|..+. +||||||||||.+++. +.. .....+..+..|+..+|+...
T Consensus 87 ~~i~~if~~A~~~~p~il~iDEid~l~~~---~~~-----------------------~~~~~~~~~~~ll~~l~~~~~- 139 (246)
T d1d2na_ 87 QAMKKIFDDAYKSQLSCVVVDDIERLLDY---VPI-----------------------GPRFSNLVLQALLVLLKKAPP- 139 (246)
T ss_dssp HHHHHHHHHHHTSSEEEEEECCHHHHTTC---BTT-----------------------TTBCCHHHHHHHHHHTTCCCS-
T ss_pred hhhhhhhhhhhhcccceeehhhhhhHhhh---ccc-----------------------ccchhHHHHHHHHHHhcCCCc-
Confidence 45778887764 6899999999997531 100 223345678889999998744
Q ss_pred cCCCeEEEEEcCCcCcccHHHhcCCeeeEEEEccCCC-HHHHHHHHHH
Q 041423 362 CGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCT-FQGFKVLAKN 408 (500)
Q Consensus 362 ~~~~~ivI~TTN~~~~lD~aLlr~GR~d~~I~~~~p~-~~~~~~l~~~ 408 (500)
.+.+++||+|||+++.||++.++ +||+.+|++|.+. .+++..+++.
T Consensus 140 ~~~~v~vi~tTn~~~~ld~~~~~-~rF~~~i~~P~~~~r~~il~~l~~ 186 (246)
T d1d2na_ 140 QGRKLLIIGTTSRKDVLQEMEML-NAFSTTIHVPNIATGEQLLEALEL 186 (246)
T ss_dssp TTCEEEEEEEESCHHHHHHTTCT-TTSSEEEECCCEEEHHHHHHHHHH
T ss_pred cccceeeeeccCChhhccchhhc-CccceEEecCCchhHHHHHHHHHh
Confidence 24457889999999999986554 5999999996654 4444444433
No 6
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.87 E-value=7.6e-25 Score=215.72 Aligned_cols=149 Identities=13% Similarity=0.138 Sum_probs=116.4
Q ss_pred HhhCCCccccee-eeCCCCCcHHHHHHHHHHHhC--CCEEEEeeccc------CChHHHHHHHHhhcCCeEEEecchhch
Q 041423 237 ARIGKAWKRGYL-LYGPPGTGKSTMIAAMANLLN--YDVYDLELTAV------KDNTELRKLLIETTSKSIIVIEDIDCS 307 (500)
Q Consensus 237 ~~~g~~~~rg~L-L~GPpGtGKTsla~aiA~~l~--~~i~~l~l~~~------~~~~~l~~l~~~~~~~~Il~iDdiD~~ 307 (500)
..+|...++|.+ ||||||||||++|+++|++++ .+++.++.+.+ .....++.+|..+..+|||||||||.+
T Consensus 115 ~~~~~~~~~g~~l~~G~pG~GKT~la~ala~~~~~~~~~~~~~~~~~~~~~~G~~e~~~~~~f~~a~~~~ilf~DEid~~ 194 (321)
T d1w44a_ 115 EFGGHRYASGMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLSGYNTDFNVFVDDIARAMLQHRVIVIDSLKNV 194 (321)
T ss_dssp EETTEEEESEEEEEECSSSSCHHHHHHHHHHHHHTTSCCEEEEBSCSSTTCBCCHHHHHHHHHHHHHHCSEEEEECCTTT
T ss_pred HHhhcccCCceEEEECCCCccHHHHHHHHHHHhcCCCCeEEEEhhHhhhcccchHHHHHHHHHHHHhhccEEEeehhhhh
Confidence 344555667765 589999999999999999986 67888988886 356789999999988999999999997
Q ss_pred hcccCcchhhhcccchHHHhhhhhhhhccCCCCCCcchhcHhHHHHHHhhhhhccCCCeEEEEEcCCc---CcccHHHhc
Q 041423 308 LDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTLSGLLNFIDGLWSACGGERLIVFTTNYV---EKLDPALIR 384 (500)
Q Consensus 308 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~lL~~ldg~~~~~~~~~ivI~TTN~~---~~lD~aLlr 384 (500)
.. .+.... .......++++||..|||+.+.. +++||+|||+. +.||++++|
T Consensus 195 ~~---~r~~~~---------------------~~~~~~r~v~~lL~e~dg~~~~~--~v~viaatN~~~~~~~i~~~~~r 248 (321)
T d1w44a_ 195 IG---AAGGNT---------------------TSGGISRGAFDLLSDIGAMAASR--GCVVIASLNPTSNDDKIVELVKE 248 (321)
T ss_dssp C-----------------------------------CCHHHHHHHHHHHHHHHHH--TCEEEEECCCCCCCHHHHHHHHH
T ss_pred cc---ccccCC---------------------CCCcchhhhhhhhhhccccccCC--CeEEEEeCCCcccccchhhhhhc
Confidence 53 321110 23334579999999999997754 59999999963 457778899
Q ss_pred CCeeeEEEEccCCCHHHHHHHHHHhhc
Q 041423 385 RGRMDKHIELSYCTFQGFKVLAKNYLN 411 (500)
Q Consensus 385 ~GR~d~~I~~~~p~~~~~~~l~~~~l~ 411 (500)
|||||++|.+++|+.+.+.+|++.+..
T Consensus 249 ~~Rf~~~v~v~~pd~~~r~~il~~~~~ 275 (321)
T d1w44a_ 249 ASRSNSTSLVISTDVDGEWQVLTRTGE 275 (321)
T ss_dssp HHHHSCSEEEEECSSTTEEEEEEECBT
T ss_pred cCcccceeecCCCChHHHHHHHHHhcc
Confidence 999999999999999999988876653
No 7
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.84 E-value=4.9e-20 Score=174.85 Aligned_cols=179 Identities=16% Similarity=0.149 Sum_probs=127.0
Q ss_pred CCCccccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecccCChH
Q 041423 205 HPATFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNT 284 (500)
Q Consensus 205 ~~~~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~~~~~ 284 (500)
.|.+|++++|++++++.|...+..... .+ ...+++|||||||||||++|+++|++++.+++.++........
T Consensus 4 RP~~~~divGqe~~~~~l~~~i~~~~~-------~~-~~~~~~L~~GPpGtGKT~lA~~la~~~~~~~~~~~~~~~~~~~ 75 (238)
T d1in4a2 4 RPKSLDEFIGQENVKKKLSLALEAAKM-------RG-EVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQG 75 (238)
T ss_dssp SCSSGGGCCSCHHHHHHHHHHHHHHHH-------HT-CCCCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEETTTCCSHH
T ss_pred CCCcHHHcCChHHHHHHHHHHHHHHHh-------cC-CCCCeEEEECCCCCcHHHHHHHHHhccCCCcccccCcccccHH
Confidence 488999999999999988777654332 12 2334899999999999999999999999999999988888888
Q ss_pred HHHHHHHhhcCCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCCCCCCcchhcHhHHHHHHhhhhhccCC
Q 041423 285 ELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTLSGLLNFIDGLWSACGG 364 (500)
Q Consensus 285 ~l~~l~~~~~~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~lL~~ldg~~~~~~~ 364 (500)
++...+.....++++++||+|.+.... . +......... . .... .........+. ....
T Consensus 76 ~~~~~~~~~~~~~~~~ide~~~~~~~~----~------~~l~~~~~~~-----~-~~~~--~~~~~~~~~~~----~~~~ 133 (238)
T d1in4a2 76 DMAAILTSLERGDVLFIDEIHRLNKAV----E------ELLYSAIEDF-----Q-IDIM--IGKGPSAKSIR----IDIQ 133 (238)
T ss_dssp HHHHHHHHCCTTCEEEEETGGGCCHHH----H------HHHHHHHHTS-----C-CCC---------------------C
T ss_pred HHHHHHHhhccCCchHHHHHHHhhhHH----H------hhcccceeee-----e-eeee--ecCcccccccc----cCCC
Confidence 888888888889999999999853100 0 0000001000 0 0000 00000000000 0123
Q ss_pred CeEEEEEcCCcCcccHHHhcCCeeeEEEEccCCCHHHHHHHHHHhhccccc
Q 041423 365 ERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNYLNVETH 415 (500)
Q Consensus 365 ~~ivI~TTN~~~~lD~aLlr~GR~d~~I~~~~p~~~~~~~l~~~~l~~~~~ 415 (500)
..++|++||++..+++++++ |++..+.++.|+.+++..+++.+......
T Consensus 134 ~~~~I~at~~~~~~~~~~~~--r~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 182 (238)
T d1in4a2 134 PFTLVGATTRSGLLSSPLRS--RFGIILELDFYTVKELKEIIKRAASLMDV 182 (238)
T ss_dssp CCEEEEEESCGGGSCHHHHT--TCSEEEECCCCCHHHHHHHHHHHHHHTTC
T ss_pred CeEEEEecCCCcccccccee--eeeEEEEecCCCHHHHHHHHHHhhhhccc
Confidence 57999999999999999998 99999999999999999999888765543
No 8
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.81 E-value=6.5e-20 Score=181.29 Aligned_cols=172 Identities=19% Similarity=0.219 Sum_probs=123.3
Q ss_pred ccCChhhHHHHHHHHHHHhhChHHH--HhhCCCcccceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecccC--------
Q 041423 212 MALEPEKKLEIIEDLVTFSKSRDFY--ARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVK-------- 281 (500)
Q Consensus 212 l~~~~~~k~~l~~~l~~~~~~~~~~--~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~~-------- 281 (500)
|+|++++|+.+...+...+++.... .+.+ .+++|+||+||||||||+||++||+.++.+++.++++.+.
T Consensus 16 ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~-~~~~~iLl~GPpG~GKT~lAkalA~~~~~~~~~i~~s~~~~~~~~~~~ 94 (309)
T d1ofha_ 16 IIGQADAKRAVAIALRNRWRRMQLQEPLRHE-VTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKE 94 (309)
T ss_dssp CCSCHHHHHHHHHHHHHHHHTTSSCHHHHHH-CCCCCEEEECCTTSSHHHHHHHHHHHHTCCEEEEEGGGGSSCCSGGGS
T ss_pred ccChHHHHHHHHHHHHHHHHHhccCCCCccC-CCCceEEEECCCCCCHHHHHHHHhhccccchhcccccccccceeEeee
Confidence 7899999999988775443321111 1111 2457999999999999999999999999999999998863
Q ss_pred ChHHHHHHHHhhc-------CCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCCCCCCcchhcHhHHHHH
Q 041423 282 DNTELRKLLIETT-------SKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTLSGLLNF 354 (500)
Q Consensus 282 ~~~~l~~l~~~~~-------~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~lL~~ 354 (500)
....++.+|..+. +||||||||||.+..-.+... ..-.....++.||..
T Consensus 95 ~~~~~~~~f~~a~~~~~~~~~~~IIf~DEIdki~~~~~~~~------------------------~~~~~~gv~~~LL~~ 150 (309)
T d1ofha_ 95 VDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSG------------------------ADVSREGVQRDLLPL 150 (309)
T ss_dssp TTHHHHHHHHTTTTCHHHHHHHCEEEEECGGGGSCCSSCCS------------------------SHHHHHHHHHHHHHH
T ss_pred ccccccccchhhhcccccccCCceEEehhhhhhhhhccCcc------------------------cchhhhHHHHHhhHH
Confidence 2345677776653 379999999999753111000 000112356779999
Q ss_pred HhhhhhccC------CCeEEEEE----cCCcCcccHHHhcCCeeeEEEEccCCCHHHHHHHHHHhh
Q 041423 355 IDGLWSACG------GERLIVFT----TNYVEKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNYL 410 (500)
Q Consensus 355 ldg~~~~~~------~~~ivI~T----TN~~~~lD~aLlr~GR~d~~I~~~~p~~~~~~~l~~~~l 410 (500)
+||.....+ .++++|+| +|.+..++|++++ |||..+.++.|+.+++++|+..+.
T Consensus 151 ~dg~~~~~~~~~i~~s~ilfi~~ga~~~~~~~~~~p~l~~--R~~~~i~~~~~~~~~~~~Il~~~~ 214 (309)
T d1ofha_ 151 VEGSTVSTKHGMVKTDHILFIASGAFQVARPSDLIPELQG--RLPIRVELTALSAADFERILTEPH 214 (309)
T ss_dssp HHCCEEEETTEEEECTTCEEEEEECCSSSCGGGSCHHHHH--TCCEEEECCCCCHHHHHHHHHSST
T ss_pred hcCCEEecCCeEEEccceeEEeccchhhcCcccchhhhhh--hhheeeeccCCCHHHHHHHHHHHH
Confidence 998533222 23456655 5788899999986 999999999999999999987664
No 9
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.78 E-value=7.5e-18 Score=159.71 Aligned_cols=163 Identities=18% Similarity=0.184 Sum_probs=117.4
Q ss_pred CCCccccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecccCChH
Q 041423 205 HPATFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNT 284 (500)
Q Consensus 205 ~~~~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~~~~~ 284 (500)
.|.+|++++|++++++++...+..... +...+.++|||||||||||++|+++|++++.++..++.+......
T Consensus 4 RP~~~ddivGq~~~~~~L~~~i~~~~~--------~~~~~~~~Ll~GPpG~GKTtla~~la~~~~~~~~~~~~~~~~~~~ 75 (239)
T d1ixsb2 4 RPKTLDEYIGQERLKQKLRVYLEAAKA--------RKEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKPG 75 (239)
T ss_dssp CCCSGGGSCSCHHHHHHHHHHHHHHTT--------SSSCCCCEEEECCTTSCHHHHHHHHHHHHTCCEEEEETTTCCSHH
T ss_pred CCCCHHHhCCHHHHHHHHHHHHHHHHh--------cCCCCCeEEEECCCCCCHHHHHHHHHHHhCCCeEeccCCccccch
Confidence 488999999999999988666543332 223456899999999999999999999999999999988876655
Q ss_pred HHHHHHHhh-cCCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCCCCCCcchhcHhHHHHHHhhh-----
Q 041423 285 ELRKLLIET-TSKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTLSGLLNFIDGL----- 358 (500)
Q Consensus 285 ~l~~l~~~~-~~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~lL~~ldg~----- 358 (500)
.....+... ..++|++|||+|.+.. . ....++..++..
T Consensus 76 ~~~~~~~~~~~~~~i~~iDe~~~~~~----~--------------------------------~~~~l~~~~e~~~~~~~ 119 (239)
T d1ixsb2 76 DLAAILANSLEEGDILFIDEIHRLSR----Q--------------------------------AEEHLYPAMEDFVMDIV 119 (239)
T ss_dssp HHHHHHHTTCCTTCEEEEETGGGCCH----H--------------------------------HHHHHHHHHHHSEEEEE
T ss_pred hhHHHHHhhccCCCeeeeecccccch----h--------------------------------HHHhhhhhhhhhhhhhh
Confidence 555444443 3568999999998521 1 001111111110
Q ss_pred ---------hhccCCCeEEEEEcCCcCcccHHHhcCCeeeEEEEccCCCHHHHHHHHHHhhccc
Q 041423 359 ---------WSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNYLNVE 413 (500)
Q Consensus 359 ---------~~~~~~~~ivI~TTN~~~~lD~aLlr~GR~d~~I~~~~p~~~~~~~l~~~~l~~~ 413 (500)
........++|++||++...+++.++ |+...+.+..|+.+++..++...+...
T Consensus 120 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~i~~~~~~~~ 181 (239)
T d1ixsb2 120 IGQGPAARTIRLELPRFTLIGATTRPGLITAPLLS--RFGIVEHLEYYTPEELAQGVMRDARLL 181 (239)
T ss_dssp CSCTTCCCEEEEECCCCEEEEEESCCSSCSCGGGG--GCSEEEECCCCCHHHHHHHHHHHHGGG
T ss_pred hccchhhhhcccCCCCEEEEeeccCcccccchhhc--ccceeeEeeccChhhhhHHHHHHHHHh
Confidence 00112346788899999888888888 666779999999999999988877543
No 10
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.76 E-value=4.7e-18 Score=162.17 Aligned_cols=168 Identities=18% Similarity=0.281 Sum_probs=116.5
Q ss_pred ccCCCccccccCChhhHHHHHHHHHHHhhChH----HHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeec
Q 041423 203 FEHPATFETMALEPEKKLEIIEDLVTFSKSRD----FYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELT 278 (500)
Q Consensus 203 ~~~~~~~~~l~~~~~~k~~l~~~l~~~~~~~~----~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~ 278 (500)
-..|.+|++|+|++..+++|.+.+..+..... .+...|..+.+++|||||||||||++|+++|++++.+++.++.+
T Consensus 7 ky~P~~~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~~~~~~~~~~~ 86 (253)
T d1sxja2 7 KYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNAS 86 (253)
T ss_dssp HTCCSSGGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcCCCCHHHhcCCHHHHHHHHHHHHhhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHHHHHHHHHHhhhhccccc
Confidence 35689999999999999999888877654321 12344556667899999999999999999999999999999998
Q ss_pred ccCChHHHHHHHHhh--------------------cCCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCC
Q 041423 279 AVKDNTELRKLLIET--------------------TSKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEP 338 (500)
Q Consensus 279 ~~~~~~~l~~l~~~~--------------------~~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (500)
...+...+...+... ....++++||+|.+..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ide~~~~~~----------------------------- 137 (253)
T d1sxja2 87 DVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSG----------------------------- 137 (253)
T ss_dssp SCCCHHHHHHTGGGGTTBCCSTTTTTC----CCSSTTSEEEEECSGGGCCT-----------------------------
T ss_pred cchhhHHHHHHHHHHhhcchhhhhhhhhhhcccccccceEEEeeecccccc-----------------------------
Confidence 887666665433211 1357899999998531
Q ss_pred CCCCcchhcHhHHHHHHhhhhhccCCCeEEEEEcCCcCcccHHHhcCCeeeEEEEccCCCHHHHHHHHHHhhc
Q 041423 339 KEEGSSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNYLN 411 (500)
Q Consensus 339 ~~~~~~~~~ls~lL~~ldg~~~~~~~~~ivI~TTN~~~~lD~aLlr~GR~d~~I~~~~p~~~~~~~l~~~~l~ 411 (500)
.....+..++..... ....++++++++....+++ +.| +...|+|+.|+.++++.+++.++.
T Consensus 138 ----~~~~~~~~~~~~~~~----~~~~ii~i~~~~~~~~~~~-l~~---~~~~i~f~~~~~~~i~~~l~~i~~ 198 (253)
T d1sxja2 138 ----GDRGGVGQLAQFCRK----TSTPLILICNERNLPKMRP-FDR---VCLDIQFRRPDANSIKSRLMTIAI 198 (253)
T ss_dssp ----TSTTHHHHHHHHHHH----CSSCEEEEESCTTSSTTGG-GTT---TSEEEECCCCCHHHHHHHHHHHHH
T ss_pred ----chhhhhHHHhhhhcc----ccccccccccccccccccc-ccc---eeeeeeccccchhHHHHHHHHHHH
Confidence 111223333333322 1222344444455556664 444 446699999999999999988874
No 11
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.72 E-value=1.5e-16 Score=150.98 Aligned_cols=187 Identities=19% Similarity=0.270 Sum_probs=130.1
Q ss_pred CCCccccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhCC--------------
Q 041423 205 HPATFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNY-------------- 270 (500)
Q Consensus 205 ~~~~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~-------------- 270 (500)
.|.+|++++|+++.++.+...+. . + ..++++|||||||||||++|+++|+.++.
T Consensus 7 rP~~~~dlig~~~~~~~L~~~i~----~-------~-~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~~~ 74 (239)
T d1njfa_ 7 RPQTFADVVGQEHVLTALANGLS----L-------G-RIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDN 74 (239)
T ss_dssp CCSSGGGSCSCHHHHHHHHHHHH----T-------T-CCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCSHH
T ss_pred CCCCHHHccChHHHHHHHHHHHH----c-------C-CCCeeEEEECCCCCcHHHHHHHHHHHhcCccccccCccccchH
Confidence 58899999999988887755442 1 1 23557999999999999999999998754
Q ss_pred ----------CEEEEeecccCChHHHHHHHHhhc------CCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhh
Q 041423 271 ----------DVYDLELTAVKDNTELRKLLIETT------SKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEIS 334 (500)
Q Consensus 271 ----------~i~~l~l~~~~~~~~l~~l~~~~~------~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 334 (500)
+++.++.++...-+.++.++.... ..-|++|||+|.+-
T Consensus 75 ~~~i~~~~~~~~~~~~~~~~~~i~~ir~~~~~~~~~~~~~~~kviiIde~d~l~-------------------------- 128 (239)
T d1njfa_ 75 CREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLS-------------------------- 128 (239)
T ss_dssp HHHHHHTCCTTEEEEETTCSSSHHHHHHHHHSCCCSCSSSSSEEEEEETGGGSC--------------------------
T ss_pred HHHHHcCCCCeEEEecchhcCCHHHHHHHHHHHHhccccCCCEEEEEECcccCC--------------------------
Confidence 356666555444556777766542 24599999999851
Q ss_pred ccCCCCCCcchhcHhHHHHHHhhhhhccCCCeEEEEEcCCcCcccHHHhcCCeeeEEEEccCCCHHHHHHHHHHhhcccc
Q 041423 335 RKEPKEEGSSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNYLNVET 414 (500)
Q Consensus 335 ~~~~~~~~~~~~~ls~lL~~ldg~~~~~~~~~ivI~TTN~~~~lD~aLlr~GR~d~~I~~~~p~~~~~~~l~~~~l~~~~ 414 (500)
....+.|+..|+.. +.+.++|++||.++.+.+++.++++. +.|+.|+.++.+.++.+......
T Consensus 129 ----------~~~q~~Llk~lE~~----~~~~~~il~tn~~~~i~~~i~SRc~~---i~~~~~~~~~i~~~l~~i~~~e~ 191 (239)
T d1njfa_ 129 ----------RHSFNALLKTLEEP----PEHVKFLLATTDPQKLPVTILSRCLQ---FHLKALDVEQIRHQLEHILNEEH 191 (239)
T ss_dssp ----------HHHHHHHHHHHHSC----CTTEEEEEEESCGGGSCHHHHTTSEE---EECCCCCHHHHHHHHHHHHHHHT
T ss_pred ----------HHHHHHHHHHHhcC----CCCeEEEEEcCCccccChhHhhhhcc---cccccCcHHHhhhHHHHHHhhhc
Confidence 12345678888743 35578999999999999999996555 99999999998888777764322
Q ss_pred chhHHHHHHHhhcCCCCHHHHHHHhCCCCCCCcHHHHHHHHHHHHHH
Q 041423 415 HTLFETIQKLMEDTKITPADVAENLMPKSPSDNVEKCLSSLIQALKE 461 (500)
Q Consensus 415 ~~l~~~i~~l~~~~~~spa~i~~~l~~~~~~~~~~~~~~~l~~~l~~ 461 (500)
..+++..+.. +... ...+.+.++..+-.++..
T Consensus 192 -------------~~~~~~~l~~-i~~~-s~Gd~R~ain~l~~~~~~ 223 (239)
T d1njfa_ 192 -------------IAHEPRALQL-LARA-AEGSLRDALSLTDQAIAS 223 (239)
T ss_dssp -------------CCBCHHHHHH-HHHH-TTTCHHHHHHHHHHHHHH
T ss_pred -------------cCCCHHHHHH-HHHH-cCCCHHHHHHHHHHHHHh
Confidence 2445444433 2222 235777777665444433
No 12
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.69 E-value=1.9e-16 Score=149.04 Aligned_cols=157 Identities=17% Similarity=0.203 Sum_probs=113.8
Q ss_pred cccCCCccccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhC-----CCEEEEe
Q 041423 202 VFEHPATFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLN-----YDVYDLE 276 (500)
Q Consensus 202 ~~~~~~~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~-----~~i~~l~ 276 (500)
.-..|.+|++|+|+++.++.+...+.. +. ...+|||||||||||++|+++|++++ .+++.++
T Consensus 16 ~ky~P~~~~diig~~~~~~~l~~~i~~-----------~~--~~~lll~Gp~G~GKTtla~~iak~l~~~~~~~~~~e~n 82 (231)
T d1iqpa2 16 EKYRPQRLDDIVGQEHIVKRLKHYVKT-----------GS--MPHLLFAGPPGVGKTTAALALARELFGENWRHNFLELN 82 (231)
T ss_dssp HHTCCCSTTTCCSCHHHHHHHHHHHHH-----------TC--CCEEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEEEEE
T ss_pred HHhCCCCHHHccCcHHHHHHHHHHHHc-----------CC--CCeEEEECCCCCcHHHHHHHHHHHHHhcccCCCeeEEe
Confidence 445688999999999888877665432 11 23699999999999999999999874 4677777
Q ss_pred ecccCChHHHHHHHHh--------hcCCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCCCCCCcchhcH
Q 041423 277 LTAVKDNTELRKLLIE--------TTSKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTL 348 (500)
Q Consensus 277 l~~~~~~~~l~~l~~~--------~~~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 348 (500)
.++......++..+.. ...+.|+++||+|.+.. ...
T Consensus 83 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iilide~d~~~~------------------------------------~~~ 126 (231)
T d1iqpa2 83 ASDERGINVIREKVKEFARTKPIGGASFKIIFLDEADALTQ------------------------------------DAQ 126 (231)
T ss_dssp TTCHHHHHTTHHHHHHHHHSCCGGGCSCEEEEEETGGGSCH------------------------------------HHH
T ss_pred cCcccchhHHHHHHHHHHhhhhccCCCceEEeehhhhhcch------------------------------------hHH
Confidence 7664332223322222 12578999999997531 122
Q ss_pred hHHHHHHhhhhhccCCCeEEEEEcCCcCcccHHHhcCCeeeEEEEccCCCHHHHHHHHHHhhcccc
Q 041423 349 SGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNYLNVET 414 (500)
Q Consensus 349 s~lL~~ldg~~~~~~~~~ivI~TTN~~~~lD~aLlr~GR~d~~I~~~~p~~~~~~~l~~~~l~~~~ 414 (500)
..|+..++.- ....++|++||+...+++++.+ |+ ..+.++.|+.++...++++.+....
T Consensus 127 ~~ll~~l~~~----~~~~~~i~~~n~~~~i~~~l~s--R~-~~i~~~~~~~~~~~~~l~~~~~~e~ 185 (231)
T d1iqpa2 127 QALRRTMEMF----SSNVRFILSCNYSSKIIEPIQS--RC-AIFRFRPLRDEDIAKRLRYIAENEG 185 (231)
T ss_dssp HHHHHHHHHT----TTTEEEEEEESCGGGSCHHHHH--TE-EEEECCCCCHHHHHHHHHHHHHTTT
T ss_pred HHHhhhcccC----CcceEEEeccCChhhchHhHhC--cc-ccccccccchhhHHHHHHHHHHHhC
Confidence 3466666543 2447889999999999999998 66 4499999999999999988876443
No 13
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.67 E-value=7.5e-16 Score=144.37 Aligned_cols=186 Identities=15% Similarity=0.191 Sum_probs=127.2
Q ss_pred ccCCCccccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhCC-----CEEEEee
Q 041423 203 FEHPATFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNY-----DVYDLEL 277 (500)
Q Consensus 203 ~~~~~~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~-----~i~~l~l 277 (500)
-..|.+|++++|+++.++.|...+. . +. ..++|||||||||||++|+++|++++. +++.++.
T Consensus 8 KyrP~~~~d~ig~~~~~~~L~~~~~----~-------~~--~~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~n~ 74 (224)
T d1sxjb2 8 KYRPQVLSDIVGNKETIDRLQQIAK----D-------GN--MPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNA 74 (224)
T ss_dssp HTCCSSGGGCCSCTHHHHHHHHHHH----S-------CC--CCCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEECT
T ss_pred HhCCCCHHHhcCCHHHHHHHHHHHH----c-------CC--CCeEEEECCCCCCchhhHHHHHHHHhccccccccccccc
Confidence 4679999999999988777655432 2 11 125999999999999999999998864 4777887
Q ss_pred cccCChHHHHHHHHh---h------cCCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCCCCCCcchhcH
Q 041423 278 TAVKDNTELRKLLIE---T------TSKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTL 348 (500)
Q Consensus 278 ~~~~~~~~l~~l~~~---~------~~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 348 (500)
++......+...+.. . ....++++||+|.+.. ...
T Consensus 75 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~kviiiDe~d~~~~------------------------------------~~~ 118 (224)
T d1sxjb2 75 SDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTA------------------------------------GAQ 118 (224)
T ss_dssp TSCCSHHHHHTHHHHHHHBCCCCCTTCCEEEEEESGGGSCH------------------------------------HHH
T ss_pred cccCCceehhhHHHHHHHhhccCCCcceEEEEEecccccch------------------------------------hHH
Confidence 776655555433322 1 1356999999998531 122
Q ss_pred hHHHHHHhhhhhccCCCeEEEEEcCCcCcccHHHhcCCeeeEEEEccCCCHHHHHHHHHHhhccccchhHHHHHHHhhcC
Q 041423 349 SGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNYLNVETHTLFETIQKLMEDT 428 (500)
Q Consensus 349 s~lL~~ldg~~~~~~~~~ivI~TTN~~~~lD~aLlr~GR~d~~I~~~~p~~~~~~~l~~~~l~~~~~~l~~~i~~l~~~~ 428 (500)
..|+..++.. ....+++++||..+.+.++|+++++ .|.|+.|+.++...++...+..+ ..
T Consensus 119 ~~ll~~~e~~----~~~~~~i~~~~~~~~i~~~l~sr~~---~i~~~~~~~~~i~~~l~~i~~~e-------------~~ 178 (224)
T d1sxjb2 119 QALRRTMELY----SNSTRFAFACNQSNKIIEPLQSQCA---ILRYSKLSDEDVLKRLLQIIKLE-------------DV 178 (224)
T ss_dssp HTTHHHHHHT----TTTEEEEEEESCGGGSCHHHHTTSE---EEECCCCCHHHHHHHHHHHHHHH-------------TC
T ss_pred HHHhhhcccc----ccceeeeeccCchhhhhhHHHHHHH---HhhhcccchhhhHHHHHHHHHhc-------------cc
Confidence 3345555543 3457899999999999999999544 49999999999999888777432 22
Q ss_pred CCCHHHHHHHhCCCCCCCcHHHHHHHHHHHH
Q 041423 429 KITPADVAENLMPKSPSDNVEKCLSSLIQAL 459 (500)
Q Consensus 429 ~~spa~i~~~l~~~~~~~~~~~~~~~l~~~l 459 (500)
.+++..+...... ...+.+.|+..|-.++
T Consensus 179 ~i~~~~l~~I~~~--s~Gd~R~ai~~Lq~~~ 207 (224)
T d1sxjb2 179 KYTNDGLEAIIFT--AEGDMRQAINNLQSTV 207 (224)
T ss_dssp CBCHHHHHHHHHH--HTTCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH--cCCcHHHHHHHHHHHH
Confidence 4555544333221 2347777776664433
No 14
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=99.65 E-value=2.1e-16 Score=158.48 Aligned_cols=133 Identities=20% Similarity=0.201 Sum_probs=90.2
Q ss_pred hCCCcccceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecccCChHHHHHHHHhhcCCeEEEecchhchhcccCcchhhh
Q 041423 239 IGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKA 318 (500)
Q Consensus 239 ~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~~~~~~l~~l~~~~~~~~Il~iDdiD~~~~~~g~~~~~~ 318 (500)
.|.|.++++|||||||||||++++++|++++.+++.++++...+. ..+.....+.+.+|||+++........
T Consensus 149 ~~~~~~~~~~~~g~~~~gk~~~~~~~~~~~~~~~i~in~s~~rs~----~~l~~~~~~~~~l~d~~~~~~~~~~~~---- 220 (362)
T d1svma_ 149 YNIPKKRYWLFKGPIDSGKTTLAAALLELCGGKALNVNLPLDRLN----FELGVAIDQFLVVFEDVKGTGGESRDL---- 220 (362)
T ss_dssp HCCTTCCEEEEECSTTSSHHHHHHHHHHHHCCEEECCSSCTTTHH----HHHGGGTTCSCEEETTCCCSTTTTTTC----
T ss_pred hCCCCcCeEEEECCCCCCHHHHHHHHHHHcCCCEEEEECcchhhH----HHHHhHHHHHHHHHHHHHHhhhhccCC----
Confidence 478889999999999999999999999999999999888765332 234555667788889888743211000
Q ss_pred cccchHHHhhhhhhhhccCCCCCCcchhcHhHHHHHHhhhhhccCCC----------eEEEEEcCCcCcccHHHhcCCee
Q 041423 319 EKSSDDEKEKLDKEISRKEPKEEGSSKVTLSGLLNFIDGLWSACGGE----------RLIVFTTNYVEKLDPALIRRGRM 388 (500)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~lL~~ldg~~~~~~~~----------~ivI~TTN~~~~lD~aLlr~GR~ 388 (500)
.....-..+..+.+.+||....+.+. +.+|+|||+ ++++++|||||
T Consensus 221 ---------------------~~~~~~DeiD~l~~~~dg~~~~~~~~~~~~~~~~~~~p~i~ttN~---~~~~~~r~~Rf 276 (362)
T d1svma_ 221 ---------------------PSGQGINNLDNLRDYLDGSVKVNLEKKHLNKRTQIFPPGIVTMNE---YSVPKTLQARF 276 (362)
T ss_dssp ---------------------CCCSHHHHHHTTHHHHHCSSCEEECCSSSCCEEECCCCEEEEECS---CCCCHHHHTTE
T ss_pred ---------------------CCeEEEehHhhcccccCCcchhhhhhhhhchhhhccCCceeeccc---ccccccccccC
Confidence 00000011233455555542221111 248889996 56778899999
Q ss_pred eEEEEccCCCHHHHH
Q 041423 389 DKHIELSYCTFQGFK 403 (500)
Q Consensus 389 d~~I~~~~p~~~~~~ 403 (500)
|..|.+..|+...+.
T Consensus 277 ~~~i~~~~~~~~~~~ 291 (362)
T d1svma_ 277 VKQIDFRPKDYLKHC 291 (362)
T ss_dssp EEEEECCCCHHHHHH
T ss_pred ceEEeecCCCcHHHH
Confidence 999999999876654
No 15
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.65 E-value=2.7e-15 Score=140.62 Aligned_cols=155 Identities=22% Similarity=0.311 Sum_probs=110.6
Q ss_pred ccCCCccccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhCCC-----EEEEee
Q 041423 203 FEHPATFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYD-----VYDLEL 277 (500)
Q Consensus 203 ~~~~~~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~~-----i~~l~l 277 (500)
-..|.+|++++|+++.++.|...+. . +.. .++|||||||||||++++++|++++.. +...+.
T Consensus 7 kyrP~~~~divg~~~~~~~L~~~i~----~-------~~~--~~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~~~ 73 (227)
T d1sxjc2 7 KYRPETLDEVYGQNEVITTVRKFVD----E-------GKL--PHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNA 73 (227)
T ss_dssp HTCCSSGGGCCSCHHHHHHHHHHHH----T-------TCC--CCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECT
T ss_pred hhCCCCHHHccCcHHHHHHHHHHHH----c-------CCC--CeEEEECCCCCChhHHHHHHHHHhhcCCCcceeEEecc
Confidence 3578999999999888877755442 2 111 259999999999999999999987533 455555
Q ss_pred cccCChHHHHHHHHhh--------cCCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCCCCCCcchhcHh
Q 041423 278 TAVKDNTELRKLLIET--------TSKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTLS 349 (500)
Q Consensus 278 ~~~~~~~~l~~l~~~~--------~~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls 349 (500)
+...........+... ....|++|||+|.+. ....+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kiiiiDe~d~~~------------------------------------~~~~~ 117 (227)
T d1sxjc2 74 SDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMT------------------------------------NAAQN 117 (227)
T ss_dssp TSCCSHHHHHTHHHHHHHBCCSSSCSCEEEEETTGGGSC------------------------------------HHHHH
T ss_pred cccCCeeeeecchhhccccccccCCCeEEEEEeccccch------------------------------------hhHHH
Confidence 5544333332222111 134699999999842 12345
Q ss_pred HHHHHHhhhhhccCCCeEEEEEcCCcCcccHHHhcCCeeeEEEEccCCCHHHHHHHHHHhhccc
Q 041423 350 GLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNYLNVE 413 (500)
Q Consensus 350 ~lL~~ldg~~~~~~~~~ivI~TTN~~~~lD~aLlr~GR~d~~I~~~~p~~~~~~~l~~~~l~~~ 413 (500)
.|+..++.. ....+++++||.+..+++++++++. .+.|..|+.++...++.+.+..+
T Consensus 118 ~Ll~~le~~----~~~~~~~~~~~~~~~i~~~i~sr~~---~i~~~~~~~~~i~~~l~~I~~~e 174 (227)
T d1sxjc2 118 ALRRVIERY----TKNTRFCVLANYAHKLTPALLSQCT---RFRFQPLPQEAIERRIANVLVHE 174 (227)
T ss_dssp HHHHHHHHT----TTTEEEEEEESCGGGSCHHHHTTSE---EEECCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHhhhc----ccceeeccccCcHHHhHHHHHHHHh---hhccccccccccccccccccccc
Confidence 677777754 3457899999999999999999544 49999999999999888877543
No 16
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.58 E-value=2.9e-14 Score=133.92 Aligned_cols=183 Identities=17% Similarity=0.226 Sum_probs=119.8
Q ss_pred ccCCCccccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHh------CCCEEEEe
Q 041423 203 FEHPATFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLL------NYDVYDLE 276 (500)
Q Consensus 203 ~~~~~~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l------~~~i~~l~ 276 (500)
-..|.+|++++|+++.++.+.. ++... . ...+||+||||||||++++++|+++ +...+.++
T Consensus 5 ky~P~~~~diig~~~~~~~l~~----~i~~~-------~--~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~ 71 (237)
T d1sxjd2 5 KYRPKNLDEVTAQDHAVTVLKK----TLKSA-------N--LPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELN 71 (237)
T ss_dssp HTCCSSTTTCCSCCTTHHHHHH----HTTCT-------T--CCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEEC
T ss_pred hhCCCCHHHccCcHHHHHHHHH----HHHcC-------C--CCeEEEECCCCCChHHHHHHHHHHHcCCcccccchhhee
Confidence 3569999999999988776643 33321 1 1259999999999999999999986 56677777
Q ss_pred ecccCChHHHHHHHHhh------------------cCCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCC
Q 041423 277 LTAVKDNTELRKLLIET------------------TSKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEP 338 (500)
Q Consensus 277 l~~~~~~~~l~~l~~~~------------------~~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (500)
.+...........+... ....|+||||+|.+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viiiDe~d~l~~----------------------------- 122 (237)
T d1sxjd2 72 ASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA----------------------------- 122 (237)
T ss_dssp SSSCCCHHHHTTHHHHHHHSCCCCCCTTHHHHSCCCSCEEEEETTGGGSCH-----------------------------
T ss_pred ccccccchHHHHHHHHHhhhhhhhhhHHHHhhccccCceEEEEecccccCH-----------------------------
Confidence 66654433222111110 1235899999998531
Q ss_pred CCCCcchhcHhHHHHHHhhhhhccCCCeEEEEEcCCcCcccHHHhcCCeeeEEEEccCCCHHHHHHHHHHhhccccchhH
Q 041423 339 KEEGSSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNYLNVETHTLF 418 (500)
Q Consensus 339 ~~~~~~~~~ls~lL~~ldg~~~~~~~~~ivI~TTN~~~~lD~aLlr~GR~d~~I~~~~p~~~~~~~l~~~~l~~~~~~l~ 418 (500)
...+.++..++.. ....++|+++|....+.+++.+ |+ .+|.|+.|+.++...+++..+....
T Consensus 123 -------~~~~~l~~~~~~~----~~~~~~i~~~~~~~~~~~~l~s--r~-~~i~f~~~~~~~~~~~L~~i~~~e~---- 184 (237)
T d1sxjd2 123 -------DAQSALRRTMETY----SGVTRFCLICNYVTRIIDPLAS--QC-SKFRFKALDASNAIDRLRFISEQEN---- 184 (237)
T ss_dssp -------HHHHHHHHHHHHT----TTTEEEEEEESCGGGSCHHHHH--HS-EEEECCCCCHHHHHHHHHHHHHTTT----
T ss_pred -------HHHHHHhhccccc----cccccccccccccccccccccc--hh-hhhccccccccccchhhhhhhhhhc----
Confidence 1223344444432 2446788899999999999999 66 5699999999999998887764322
Q ss_pred HHHHHHhhcCCCCHHHHHHHhCCCCCCCcHHHHHHHHH
Q 041423 419 ETIQKLMEDTKITPADVAENLMPKSPSDNVEKCLSSLI 456 (500)
Q Consensus 419 ~~i~~l~~~~~~spa~i~~~l~~~~~~~~~~~~~~~l~ 456 (500)
..+++..+..... . ...+.+.|+..|-
T Consensus 185 ---------i~i~~~~l~~ia~-~-s~gd~R~ai~~L~ 211 (237)
T d1sxjd2 185 ---------VKCDDGVLERILD-I-SAGDLRRGITLLQ 211 (237)
T ss_dssp ---------CCCCHHHHHHHHH-H-TSSCHHHHHHHHH
T ss_pred ---------CcCCHHHHHHHHH-H-cCCCHHHHHHHHH
Confidence 2455544433222 2 2346666665553
No 17
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.56 E-value=8.2e-15 Score=139.07 Aligned_cols=154 Identities=14% Similarity=0.182 Sum_probs=99.1
Q ss_pred ccCCCccccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhCCC---EEE-----
Q 041423 203 FEHPATFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYD---VYD----- 274 (500)
Q Consensus 203 ~~~~~~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~~---i~~----- 274 (500)
-..|.+|++++|+++.++.|. .++.. +.. ..++|||||||||||++|+++|+++..+ ...
T Consensus 4 ky~P~~~~diig~~~~~~~L~----~~~~~-------~~~-~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~~ 71 (252)
T d1sxje2 4 KYRPKSLNALSHNEELTNFLK----SLSDQ-------PRD-LPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQ 71 (252)
T ss_dssp TTCCCSGGGCCSCHHHHHHHH----TTTTC-------TTC-CCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC-------
T ss_pred ccCCCCHHHccCcHHHHHHHH----HHHHc-------CCC-CCeEEEECCCCCCHHHHHHHHHHhhcCcccccccccccc
Confidence 346889999999987766663 33322 111 2369999999999999999999986211 111
Q ss_pred ---------------------EeecccCC--hHHHHHHHHh----------------hcCCeEEEecchhchhcccCcch
Q 041423 275 ---------------------LELTAVKD--NTELRKLLIE----------------TTSKSIIVIEDIDCSLDLTGQRK 315 (500)
Q Consensus 275 ---------------------l~l~~~~~--~~~l~~l~~~----------------~~~~~Il~iDdiD~~~~~~g~~~ 315 (500)
+....... .......... .+...+++|||+|.+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiide~d~l~------- 144 (252)
T d1sxje2 72 FVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLT------- 144 (252)
T ss_dssp -----------CCEECSSEEEECCC----CCHHHHHHHHHHHTTTTC------------CCEEEEEECTTSSC-------
T ss_pred ccccccchhhhhhccCCccceeeecccccCCcceeeehhhhhhhhhhhhhhhcccccCCCceEEEeccccccc-------
Confidence 11111111 1111111111 0124588899998742
Q ss_pred hhhcccchHHHhhhhhhhhccCCCCCCcchhcHhHHHHHHhhhhhccCCCeEEEEEcCCcCcccHHHhcCCeeeEEEEcc
Q 041423 316 KKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELS 395 (500)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~lL~~ldg~~~~~~~~~ivI~TTN~~~~lD~aLlr~GR~d~~I~~~ 395 (500)
......++..++.. .....+|+|||+++.+++++++ |+ .+|+|+
T Consensus 145 -----------------------------~~~~~~l~~~~e~~----~~~~~~Il~tn~~~~i~~~l~s--R~-~~i~~~ 188 (252)
T d1sxje2 145 -----------------------------KDAQAALRRTMEKY----SKNIRLIMVCDSMSPIIAPIKS--QC-LLIRCP 188 (252)
T ss_dssp -----------------------------HHHHHHHHHHHHHS----TTTEEEEEEESCSCSSCHHHHT--TS-EEEECC
T ss_pred -----------------------------cccchhhhcccccc----cccccceeeeccccchhhhhhc--ch-heeeec
Confidence 12344566666543 3457789999999999999998 66 579999
Q ss_pred CCCHHHHHHHHHHhhc
Q 041423 396 YCTFQGFKVLAKNYLN 411 (500)
Q Consensus 396 ~p~~~~~~~l~~~~l~ 411 (500)
.|+.++..+++...+.
T Consensus 189 ~~~~~~~~~~l~~i~~ 204 (252)
T d1sxje2 189 APSDSEISTILSDVVT 204 (252)
T ss_dssp CCCHHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHH
Confidence 9999999998877664
No 18
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.45 E-value=1e-12 Score=125.63 Aligned_cols=224 Identities=9% Similarity=0.038 Sum_probs=123.9
Q ss_pred ccccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhC---------CCEEEEeec
Q 041423 208 TFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLN---------YDVYDLELT 278 (500)
Q Consensus 208 ~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~---------~~i~~l~l~ 278 (500)
..+.+.+.++..++|.+.+..++.... ........++||||||||||++++++++.+. ..+..+++.
T Consensus 14 ~P~~~~~Re~e~~~l~~~l~~~~~~~~----~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~ 89 (287)
T d1w5sa2 14 IPPELRVRRGEAEALARIYLNRLLSGA----GLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAF 89 (287)
T ss_dssp CCSSCSSSCHHHHHHHHHHHHHHHTSS----CBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGG
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCC----CCCCcceEEEeECCCCCCHHHHHHHHHHHHHhhcccccCCceeeeeccc
Confidence 346778888888888887766654310 0011122367899999999999999999873 233444544
Q ss_pred ccCChH----------------------HHH----HHHHhhcCCeEEEecchhchhcccCcchhhhcccchHHHhhhhhh
Q 041423 279 AVKDNT----------------------ELR----KLLIETTSKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKE 332 (500)
Q Consensus 279 ~~~~~~----------------------~l~----~l~~~~~~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~ 332 (500)
...+.. .+. ........+.++++|++|.+....+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l~~~~~-------------------- 149 (287)
T d1w5sa2 90 NAPNLYTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPR-------------------- 149 (287)
T ss_dssp GCCSHHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTT--------------------
T ss_pred cccchhhHHHHHhhhcccccccccchHHHHHHHHHHHHHhccCccccceeEEEEeccccc--------------------
Confidence 432221 111 1222334567889999998642110
Q ss_pred hhccCCCCCCcchhcHhHHHHHHhhhhhccCCCeEEEEEcCCcCc------ccHHHhcCCeeeEEEEccCCCHHHHHHHH
Q 041423 333 ISRKEPKEEGSSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEK------LDPALIRRGRMDKHIELSYCTFQGFKVLA 406 (500)
Q Consensus 333 ~~~~~~~~~~~~~~~ls~lL~~ldg~~~~~~~~~ivI~TTN~~~~------lD~aLlr~GR~d~~I~~~~p~~~~~~~l~ 406 (500)
........+..+.+.+..... .....+|+.+|.++. .++++.+ |++.+++|+.++.++..+|+
T Consensus 150 -------~~~~~~~~l~~l~~~l~~~~~--~~~~~~i~i~~~~~~~~~~~~~~~~~~~--r~~~~i~f~~y~~~el~~Il 218 (287)
T d1w5sa2 150 -------IAAEDLYTLLRVHEEIPSRDG--VNRIGFLLVASDVRALSYMREKIPQVES--QIGFKLHLPAYKSRELYTIL 218 (287)
T ss_dssp -------SCHHHHHHHHTHHHHSCCTTS--CCBEEEEEEEEETHHHHHHHHHCHHHHT--TCSEEEECCCCCHHHHHHHH
T ss_pred -------cchhHHHHHHHHHHhcchhhc--ccceeEEeecccHHHHHHHHhhccchhc--ccceeeeccCCcHHHHHHHH
Confidence 000111122233333322211 234566666665543 3457766 88999999999999999999
Q ss_pred HHhhccccchhHHHHHHHhhcCCCCHHHH---HHHhCCC-CCCCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 041423 407 KNYLNVETHTLFETIQKLMEDTKITPADV---AENLMPK-SPSDNVEKCLSSLIQALKEGKEEAERKQAEEERKQ 477 (500)
Q Consensus 407 ~~~l~~~~~~l~~~i~~l~~~~~~spa~i---~~~l~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 477 (500)
+..+..... ...++++-| ++..... ....+++.++..+..++..+..+.......+.+++
T Consensus 219 ~~r~~~~~~-----------~~~~~~~al~~ia~~~~~~~~~~gd~R~ai~~l~~a~~~A~~~~~~~It~~~V~~ 282 (287)
T d1w5sa2 219 EQRAELGLR-----------DTVWEPRHLELISDVYGEDKGGDGSARRAIVALKMACEMAEAMGRDSLSEDLVRK 282 (287)
T ss_dssp HHHHHHHBC-----------TTSCCHHHHHHHHHHHCGGGTSCCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHH
T ss_pred hhhHHHhhc-----------cCCCCHHHHHHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHHH
Confidence 877632111 112343322 2222221 23457877777766666554444433444444433
No 19
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.45 E-value=1.3e-12 Score=128.34 Aligned_cols=158 Identities=13% Similarity=0.207 Sum_probs=112.1
Q ss_pred cccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecccCChH------
Q 041423 211 TMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNT------ 284 (500)
Q Consensus 211 ~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~~~~~------ 284 (500)
.|+|++++++.+...+.....+ +.+.. .+...+||+||||+|||.||++||..++.+++.++++.+.+..
T Consensus 23 ~viGQ~~a~~~v~~~v~~~~~~---l~~~~-~p~~~~lf~Gp~GvGKT~lak~la~~l~~~~i~~d~s~~~~~~~~~~l~ 98 (315)
T d1r6bx3 23 LVFGQDKAIEALTEAIKMARAG---LGHEH-KPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLI 98 (315)
T ss_dssp TSCSCHHHHHHHHHHHHHHHTT---CSCTT-SCSEEEEEECSTTSSHHHHHHHHHHHHTCEEEEEEGGGCSSSSCCSSSC
T ss_pred eecChHHHHHHHHHHHHHHHcc---CCCCC-CCceEEEEECCCcchhHHHHHHHHhhccCCeeEeccccccchhhhhhhc
Confidence 4789999999998877644322 00111 1222489999999999999999999999999999999874321
Q ss_pred -------------HHHHHHHhhcCCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCCCCCCcchhcHhHH
Q 041423 285 -------------ELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTLSGL 351 (500)
Q Consensus 285 -------------~l~~l~~~~~~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l 351 (500)
.+...+ .....+|++|||||.+- ....+.|
T Consensus 99 g~~~gy~g~~~~~~l~~~~-~~~~~~vvl~DeieKa~------------------------------------~~V~~~l 141 (315)
T d1r6bx3 99 GAPPGYVGFDQGGLLTDAV-IKHPHAVLLLDEIEKAH------------------------------------PDVFNIL 141 (315)
T ss_dssp CCCSCSHHHHHTTHHHHHH-HHCSSEEEEEETGGGSC------------------------------------HHHHHHH
T ss_pred ccCCCccccccCChhhHHH-HhCccchhhhccccccc------------------------------------chHhhhh
Confidence 122222 23567999999999831 2256677
Q ss_pred HHHHhhhh--hcc-----CCCeEEEEEcCCc-------------------------CcccHHHhcCCeeeEEEEccCCCH
Q 041423 352 LNFIDGLW--SAC-----GGERLIVFTTNYV-------------------------EKLDPALIRRGRMDKHIELSYCTF 399 (500)
Q Consensus 352 L~~ldg~~--~~~-----~~~~ivI~TTN~~-------------------------~~lD~aLlr~GR~d~~I~~~~p~~ 399 (500)
|+.+|.-. ... -.+.++|+|||-- ..+.|.|+. |+|..|.|.+.+.
T Consensus 142 Lqild~G~ltd~~Gr~vdf~n~iiI~Tsnig~~~i~~~~~~~~~~~~~~~~~~~l~~~f~pEfln--Rid~ii~f~~l~~ 219 (315)
T d1r6bx3 142 LQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRN--RLDNIIWFDHLST 219 (315)
T ss_dssp HHHHHHSEEEETTTEEEECTTEEEEEEECSSCC-----------------CHHHHHHHSCHHHHT--TCSEEEECCCCCH
T ss_pred HHhhccceecCCCCCccCccceEEEeccchhhHHHHhhhccchhhhhhHhHHHHHHHhcCHHHHh--hhhhhhcccchhh
Confidence 77776321 111 1346899999932 135667777 9999999999999
Q ss_pred HHHHHHHHHhhc
Q 041423 400 QGFKVLAKNYLN 411 (500)
Q Consensus 400 ~~~~~l~~~~l~ 411 (500)
++...|+..++.
T Consensus 220 ~~~~~I~~~~l~ 231 (315)
T d1r6bx3 220 DVIHQVVDKFIV 231 (315)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 999999988774
No 20
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.44 E-value=3.6e-12 Score=117.62 Aligned_cols=125 Identities=18% Similarity=0.157 Sum_probs=91.3
Q ss_pred cccceeeeCCCCCcHHHHHHHHHHHhC------------------------CCEEEEeeccc---CChHHHHHHHHhhc-
Q 041423 243 WKRGYLLYGPPGTGKSTMIAAMANLLN------------------------YDVYDLELTAV---KDNTELRKLLIETT- 294 (500)
Q Consensus 243 ~~rg~LL~GPpGtGKTsla~aiA~~l~------------------------~~i~~l~l~~~---~~~~~l~~l~~~~~- 294 (500)
.+.++||+||||+|||++|+++|+.+. .+++.+....- -....++.+.....
T Consensus 23 l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~ir~l~~~~~~ 102 (207)
T d1a5ta2 23 GHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNE 102 (207)
T ss_dssp CCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTCCTTEEEECCCTTCSSBCHHHHHHHHHHTTS
T ss_pred cCeEEEEECCCCCcHHHHHHHHHHhcccccccccccccccchhhhhhhccccccchhhhhhcccccccchhhHHhhhhhh
Confidence 455799999999999999999999762 23444433221 13345666655432
Q ss_pred -----CCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCCCCCCcchhcHhHHHHHHhhhhhccCCCeEEE
Q 041423 295 -----SKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTLSGLLNFIDGLWSACGGERLIV 369 (500)
Q Consensus 295 -----~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~lL~~ldg~~~~~~~~~ivI 369 (500)
..-|++|||+|.+- ....+.||..|+.. +.+.++|
T Consensus 103 ~~~~~~~kviIide~d~l~------------------------------------~~a~n~Llk~lEep----~~~~~fI 142 (207)
T d1a5ta2 103 HARLGGAKVVWVTDAALLT------------------------------------DAAANALLKTLEEP----PAETWFF 142 (207)
T ss_dssp CCTTSSCEEEEESCGGGBC------------------------------------HHHHHHHHHHHTSC----CTTEEEE
T ss_pred ccccCccceEEechhhhhh------------------------------------hhhhHHHHHHHHhh----cccceee
Confidence 35699999999842 22456788888753 4568899
Q ss_pred EEcCCcCcccHHHhcCCeeeEEEEccCCCHHHHHHHHHHhh
Q 041423 370 FTTNYVEKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNYL 410 (500)
Q Consensus 370 ~TTN~~~~lD~aLlr~GR~d~~I~~~~p~~~~~~~l~~~~l 410 (500)
++||+++.|.|++++ |. ..|.|+.|+.++...+++.-.
T Consensus 143 l~t~~~~~ll~tI~S--Rc-~~i~~~~~~~~~~~~~L~~~~ 180 (207)
T d1a5ta2 143 LATREPERLLATLRS--RC-RLHYLAPPPEQYAVTWLSREV 180 (207)
T ss_dssp EEESCGGGSCHHHHT--TS-EEEECCCCCHHHHHHHHHHHC
T ss_pred eeecChhhhhhhhcc--ee-EEEecCCCCHHHHHHHHHHcC
Confidence 999999999999999 44 459999999998887776544
No 21
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.42 E-value=2.5e-12 Score=122.13 Aligned_cols=165 Identities=15% Similarity=0.066 Sum_probs=102.5
Q ss_pred ccCCCccccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhC----CCEEEEeec
Q 041423 203 FEHPATFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLN----YDVYDLELT 278 (500)
Q Consensus 203 ~~~~~~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~----~~i~~l~l~ 278 (500)
+.+.-..+++++.+...+.|.+.|...++++ | ..++++||+||||||||++++++|+.+. ..++.+++.
T Consensus 9 l~~~y~p~~l~~Re~ei~~l~~~l~~~l~~~------~-~~~~~lll~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~ 81 (276)
T d1fnna2 9 FSPSYVPKRLPHREQQLQQLDILLGNWLRNP------G-HHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGF 81 (276)
T ss_dssp GSTTCCCSCCTTCHHHHHHHHHHHHHHHHST------T-SSCCEEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEEETT
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHhCC------C-CCCCceEEECCCCCCHHHHHHHHHHHHhcccCCcEEEecch
Confidence 3333345678898888888888777655542 2 2456899999999999999999999884 335555554
Q ss_pred ccCChHHH--------------------------HHHHHhhcCCeEEEecchhchhcccCcchhhhcccchHHHhhhhhh
Q 041423 279 AVKDNTEL--------------------------RKLLIETTSKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKE 332 (500)
Q Consensus 279 ~~~~~~~l--------------------------~~l~~~~~~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~ 332 (500)
.......+ ...+.......++++|++|.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~----------------------- 138 (276)
T d1fnna2 82 IYRNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAP----------------------- 138 (276)
T ss_dssp TCCSHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSCH-----------------------
T ss_pred hhhhhhhhhhhhHHhhhhhhhhhccchhHHHHHHHHHHhhcccccccchhHHHHhhh-----------------------
Confidence 43222211 11122223456677777776321
Q ss_pred hhccCCCCCCcchhcHhHHHHHHhhhhhccCCCeEEEEEcCCc---CcccHHHhcCCeeeEEEEccCCCHHHHHHHHHHh
Q 041423 333 ISRKEPKEEGSSKVTLSGLLNFIDGLWSACGGERLIVFTTNYV---EKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNY 409 (500)
Q Consensus 333 ~~~~~~~~~~~~~~~ls~lL~~ldg~~~~~~~~~ivI~TTN~~---~~lD~aLlr~GR~d~~I~~~~p~~~~~~~l~~~~ 409 (500)
.....+...++..........++|+++|.. +.+++++.++. ....|.|+.++.+++..|++..
T Consensus 139 -------------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~-~~~~i~~~~~~~~e~~~il~~r 204 (276)
T d1fnna2 139 -------------DILSTFIRLGQEADKLGAFRIALVIVGHNDAVLNNLDPSTRGIM-GKYVIRFSPYTKDQIFDILLDR 204 (276)
T ss_dssp -------------HHHHHHHHHTTCHHHHSSCCEEEEEEESSTHHHHTSCHHHHHHH-TTCEEECCCCBHHHHHHHHHHH
T ss_pred -------------hhhhhHHHHHhccccccccceEEeecCCchhhhhhcchhhhhhh-cchhccccchhHHHHHHHHHHH
Confidence 011111112221111223456788888864 56788888732 2356899999999999998887
Q ss_pred hc
Q 041423 410 LN 411 (500)
Q Consensus 410 l~ 411 (500)
+.
T Consensus 205 ~~ 206 (276)
T d1fnna2 205 AK 206 (276)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 22
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=99.40 E-value=3.1e-12 Score=127.93 Aligned_cols=189 Identities=21% Similarity=0.267 Sum_probs=119.2
Q ss_pred cccCChhhHHHHHHHHHHHhhChH------------------HHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhCCCE
Q 041423 211 TMALEPEKKLEIIEDLVTFSKSRD------------------FYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDV 272 (500)
Q Consensus 211 ~l~~~~~~k~~l~~~l~~~~~~~~------------------~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~~i 272 (500)
-|+|+++.|+.+...+..-+++.. ...+..+ ++.++||.||+|||||.+|++||..++.++
T Consensus 18 ~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~-p~~niLfiGPTGvGKTElAk~LA~~~~~~~ 96 (364)
T d1um8a_ 18 YVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVEL-SKSNILLIGPTGSGKTLMAQTLAKHLDIPI 96 (364)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTC-CCCCEEEECCTTSSHHHHHHHHHHHTTCCE
T ss_pred eecChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccC-CCcceeeeCCCCccHHHHHHHHHhhcccce
Confidence 478999999999877754332211 1112233 456899999999999999999999999999
Q ss_pred EEEeecccCC--------hHHHHHHHHhhc------CCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCC
Q 041423 273 YDLELTAVKD--------NTELRKLLIETT------SKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEP 338 (500)
Q Consensus 273 ~~l~l~~~~~--------~~~l~~l~~~~~------~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (500)
+.++++.+.. ...+..++...+ +.+|+++||+|........... .
T Consensus 97 ir~D~s~~~e~gyvg~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEieK~~~~s~~~~~---------------------~ 155 (364)
T d1um8a_ 97 AISDATSLTEAGYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKISRLSENRSI---------------------T 155 (364)
T ss_dssp EEEEGGGCC--------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC-------------------------------
T ss_pred eehhhhhcccchhhHhhhccchhhhhhhchhHHHHhhcccchhhhhhhhccccccccc---------------------c
Confidence 9999998743 455677776554 4799999999996432111000 0
Q ss_pred CCCCcchhcHhHHHHHHhhhh----hc-----cCCCeEEEEEcCCc----------------------------------
Q 041423 339 KEEGSSKVTLSGLLNFIDGLW----SA-----CGGERLIVFTTNYV---------------------------------- 375 (500)
Q Consensus 339 ~~~~~~~~~ls~lL~~ldg~~----~~-----~~~~~ivI~TTN~~---------------------------------- 375 (500)
.+....-..+.||+.+|+-. .. ...+.++|+|+|-.
T Consensus 156 -~d~a~~~V~~~lLqild~~~~~~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (364)
T d1um8a_ 156 -RDVSGEGVQQALLKIVEGSLVNIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKE 234 (364)
T ss_dssp -----CHHHHHHHHHHHHCCEEC---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTT
T ss_pred -ccccchHHHHhhhhhhcCceeccCCCCCCcCCcceeEEEeehhhhhhhcccchhhhhhhhhhcccccccccccccchhh
Confidence 11233446777888888421 11 11235677777741
Q ss_pred ---------------CcccHHHhcCCeeeEEEEccCCCHHHHHHHHHHhhccccchhHHHHHHHhhcC
Q 041423 376 ---------------EKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNYLNVETHTLFETIQKLMEDT 428 (500)
Q Consensus 376 ---------------~~lD~aLlr~GR~d~~I~~~~p~~~~~~~l~~~~l~~~~~~l~~~i~~l~~~~ 428 (500)
..+-|.|+. |+|..+.|...+.+...+|+.... ..+..+...+++..
T Consensus 235 ~~~~~~~~~~~~~~~~~f~PEf~g--Ri~~iv~f~~L~~~~l~~Il~~~~----~~l~kq~~~~l~~~ 296 (364)
T d1um8a_ 235 QEAILHLVQTHDLVTYGLIPELIG--RLPVLSTLDSISLEAMVDILQKPK----NALIKQYQQLFKMD 296 (364)
T ss_dssp TTTSGGGCCHHHHHHTTCCHHHHT--TCCEEEECCCCCHHHHHHHHHSST----TCHHHHHHHHHHTT
T ss_pred hhhhhccccHHHHhhhhhHHHHHH--HhcchhhHhhhhHHHHHHHHHHHH----HHHHHHHHHHHHhC
Confidence 114455655 999999999999999999986543 22334445555433
No 23
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.38 E-value=3.2e-12 Score=125.47 Aligned_cols=158 Identities=16% Similarity=0.250 Sum_probs=110.2
Q ss_pred cccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHh---CCCEEEEeecccCChHH--
Q 041423 211 TMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLL---NYDVYDLELTAVKDNTE-- 285 (500)
Q Consensus 211 ~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l---~~~i~~l~l~~~~~~~~-- 285 (500)
.|+|+++.++.|...+.....+- .... .+...+||+||||+|||.+|+++|..+ +.+++.++++...+...
T Consensus 24 ~v~GQ~~ai~~v~~~i~~~~~~l---~~~~-kp~~~~lf~Gp~G~GKt~lak~la~~l~~~~~~~~~~~~~~~~~~~~~~ 99 (315)
T d1qvra3 24 RVVGQDEAIRAVADAIRRARAGL---KDPN-RPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVS 99 (315)
T ss_dssp HSCSCHHHHHHHHHHHHHHGGGC---SCSS-SCSEEEEEBSCSSSSHHHHHHHHHHHHHSSGGGEEEECTTTCCSSGGGG
T ss_pred eEeCHHHHHHHHHHHHHHHhcCC---CCCC-CCceEEEEECCCcchHHHHHHHHHHHhcCCCcceEEEeccccccchhhh
Confidence 46899999999988886554320 0011 122247899999999999999999998 77899998887754322
Q ss_pred -----------------HHHHHHhhcCCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCCCCCCcchhcH
Q 041423 286 -----------------LRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTL 348 (500)
Q Consensus 286 -----------------l~~l~~~~~~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 348 (500)
|...+.. ...||++|||||..- ....
T Consensus 100 ~L~g~~~gyvG~~~~~~l~~~~~~-~p~~Vvl~DEieK~~------------------------------------~~v~ 142 (315)
T d1qvra3 100 RLIGAPPGYVGYEEGGQLTEAVRR-RPYSVILFDEIEKAH------------------------------------PDVF 142 (315)
T ss_dssp GC--------------CHHHHHHH-CSSEEEEESSGGGSC------------------------------------HHHH
T ss_pred hhcCCCCCCcCcccCChHHHHHHh-CCCcEEEEehHhhcC------------------------------------HHHH
Confidence 2222222 346999999999841 1244
Q ss_pred hHHHHHHhhhhhcc-------CCCeEEEEEcCC--------------------------cCcccHHHhcCCeeeEEEEcc
Q 041423 349 SGLLNFIDGLWSAC-------GGERLIVFTTNY--------------------------VEKLDPALIRRGRMDKHIELS 395 (500)
Q Consensus 349 s~lL~~ldg~~~~~-------~~~~ivI~TTN~--------------------------~~~lD~aLlr~GR~d~~I~~~ 395 (500)
..|+..+|.-.-.. -.+.++|+|||- .+.+.|.|+. |||..+.|.
T Consensus 143 ~~ll~~l~~g~~~~~~gr~v~~~~~i~i~tsnlG~~~i~~~~~~~~~~~~~~~~~~~~l~~~f~pEfln--Rid~Ii~F~ 220 (315)
T d1qvra3 143 NILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLN--RLDEIVVFR 220 (315)
T ss_dssp HHHHHHHTTTEECCSSSCCEECTTEEEEEECCTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTSCHHHHH--TCSBCCBCC
T ss_pred HHHHHHhccCceeCCCCcEecCcceEEEEecccChHHHhhhcccccchhhhhHHHHHHHHhhcCHHHHh--cCCeeeecc
Confidence 55666665321111 134689999994 2447888888 999999999
Q ss_pred CCCHHHHHHHHHHhhc
Q 041423 396 YCTFQGFKVLAKNYLN 411 (500)
Q Consensus 396 ~p~~~~~~~l~~~~l~ 411 (500)
+.+.++..+|+...+.
T Consensus 221 ~L~~~~~~~I~~~~l~ 236 (315)
T d1qvra3 221 PLTKEQIRQIVEIQLS 236 (315)
T ss_dssp CCCHHHHHHHHHHHHH
T ss_pred chhhhhhHHHHHHHHH
Confidence 9999999999887763
No 24
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.35 E-value=1.5e-11 Score=117.27 Aligned_cols=193 Identities=18% Similarity=0.273 Sum_probs=121.6
Q ss_pred cccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHh----------CCCEEEEeec
Q 041423 209 FETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLL----------NYDVYDLELT 278 (500)
Q Consensus 209 ~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l----------~~~i~~l~l~ 278 (500)
++.++|.++..+++++.+. ...+.++||.||||+|||+++..+|..+ +..++.++++
T Consensus 17 ld~~igRd~Ei~~l~~iL~-------------r~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~ 83 (268)
T d1r6bx2 17 IDPLIGREKELERAIQVLC-------------RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIG 83 (268)
T ss_dssp SCCCCSCHHHHHHHHHHHT-------------SSSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC
T ss_pred CCcccChHHHHHHHHHHHh-------------cCccCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeeec
Confidence 5667888776666655442 2335689999999999999999999853 6678988887
Q ss_pred ccC--------ChHHHHHHHHhhc--CCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCCCCCCcchhcH
Q 041423 279 AVK--------DNTELRKLLIETT--SKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTL 348 (500)
Q Consensus 279 ~~~--------~~~~l~~l~~~~~--~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 348 (500)
.+- -...+..++.... .+.|+||||++.++...+ .......+
T Consensus 84 ~liag~~~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~----------------------------~~g~~~d~ 135 (268)
T d1r6bx2 84 SLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGA----------------------------ASGGQVDA 135 (268)
T ss_dssp ---CCCCCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCC----------------------------SSSCHHHH
T ss_pred hHhccCccchhHHHHHHHHHHHhhccCCceEEecchHHHhcCCC----------------------------CCCccccH
Confidence 762 2345677777764 468999999999863211 01112222
Q ss_pred hHHHHHHhhhhhccCCCeEEEEEcCCc-----CcccHHHhcCCeeeEEEEccCCCHHHHHHHHHHhhccccchhHHHHHH
Q 041423 349 SGLLNFIDGLWSACGGERLIVFTTNYV-----EKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNYLNVETHTLFETIQK 423 (500)
Q Consensus 349 s~lL~~ldg~~~~~~~~~ivI~TTN~~-----~~lD~aLlr~GR~d~~I~~~~p~~~~~~~l~~~~l~~~~~~l~~~i~~ 423 (500)
.. .|--.- ..+++-+|++|... ..-||||.| || ..|.+..|+.++...|++.+......
T Consensus 136 a~---~Lkp~L--~rg~i~vIgatT~eey~~~~e~d~al~r--rF-~~I~V~Eps~e~t~~IL~~~~~~~e~-------- 199 (268)
T d1r6bx2 136 AN---LIKPLL--SSGKIRVIGSTTYQEFSNIFEKDRALAR--RF-QKIDITEPSIEETVQIINGLKPKYEA-------- 199 (268)
T ss_dssp HH---HHSSCS--SSCCCEEEEEECHHHHHCCCCCTTSSGG--GE-EEEECCCCCHHHHHHHHHHHHHHHHH--------
T ss_pred HH---HhhHHH--hCCCCeEEEeCCHHHHHHHHhhcHHHHh--hh-cccccCCCCHHHHHHHHHHhhHHHhc--------
Confidence 22 232221 23567777777532 345899999 89 55999999999999998765432110
Q ss_pred HhhcCCCCHHH------HHHHhCCCCCCCcHHHHHHHHHHHHHH
Q 041423 424 LMEDTKITPAD------VAENLMPKSPSDNVEKCLSSLIQALKE 461 (500)
Q Consensus 424 l~~~~~~spa~------i~~~l~~~~~~~~~~~~~~~l~~~l~~ 461 (500)
-....+++.- ++..+++ .+..|+.|++-+-++..+
T Consensus 200 -~h~v~~~~~al~~~v~ls~ryi~--~~~~PdKAIdllDea~a~ 240 (268)
T d1r6bx2 200 -HHDVRYTAKAVRAAVELAVKYIN--DRHLPDKAIDVIDEAGAR 240 (268)
T ss_dssp -HHTCCCCHHHHHHHHHHHHHHCT--TSCTTHHHHHHHHHHHHH
T ss_pred -cCCEEeChHHHHHHHHHHHhhcc--CCCCCcHHHHHHHHHHHH
Confidence 0011333332 3344443 677888888866555433
No 25
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=99.31 E-value=1.5e-11 Score=113.90 Aligned_cols=131 Identities=18% Similarity=0.255 Sum_probs=86.1
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHh---CCCEEEEeecccCC-------hHHHHHHHHhhcCCeEEEecchhchhcccCcc
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLL---NYDVYDLELTAVKD-------NTELRKLLIETTSKSIIVIEDIDCSLDLTGQR 314 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l---~~~i~~l~l~~~~~-------~~~l~~l~~~~~~~~Il~iDdiD~~~~~~g~~ 314 (500)
+.++||||||||||+|++|+|+++ +..++.++...... .......+.....-.+|+|||||.+. |.
T Consensus 37 n~l~l~G~~G~GKTHLl~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~iDDi~~i~---~~- 112 (213)
T d1l8qa2 37 NPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLS---GK- 112 (213)
T ss_dssp SSEEEECSSSSSHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHHHHHHHTCHHHHHHHHHTCSEEEEECGGGGT---TC-
T ss_pred CcEEEECCCCCcHHHHHHHHHHHhccCccceEEechHHHHHHHHHHHHccchhhHHHHHhhccchhhhhhhhhc---Cc-
Confidence 458999999999999999999987 45666666554311 01122333444567899999999863 21
Q ss_pred hhhhcccchHHHhhhhhhhhccCCCCCCcchhcHhHHHHHHhhhhhccCCCeEEEEEcCCcCcc---cHHHhcCCeeeEE
Q 041423 315 KKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKL---DPALIRRGRMDKH 391 (500)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~lL~~ldg~~~~~~~~~ivI~TTN~~~~l---D~aLlr~GR~d~~ 391 (500)
...-..|.+.++.+... +..+||.+...|..+ .|.|..+-+-...
T Consensus 113 ------------------------------~~~~~~lf~lin~~~~~--~~~iiits~~~p~~l~~~~~dL~SRL~~g~~ 160 (213)
T d1l8qa2 113 ------------------------------ERTQIEFFHIFNTLYLL--EKQIILASDRHPQKLDGVSDRLVSRFEGGIL 160 (213)
T ss_dssp ------------------------------HHHHHHHHHHHHHHHHT--TCEEEEEESSCGGGCTTSCHHHHHHHHTSEE
T ss_pred ------------------------------hHHHHHHHHHHHHHhhc--cceEEEecCCcchhccccchHHHHHhhCceE
Confidence 12333455566655432 446677676777655 4778773333466
Q ss_pred EEccCCCHHHHHHHHHHhhcc
Q 041423 392 IELSYCTFQGFKVLAKNYLNV 412 (500)
Q Consensus 392 I~~~~p~~~~~~~l~~~~l~~ 412 (500)
+.++ |+.+.+.++++.+...
T Consensus 161 ~~i~-p~d~~~~~iL~~~a~~ 180 (213)
T d1l8qa2 161 VEIE-LDNKTRFKIIKEKLKE 180 (213)
T ss_dssp EECC-CCHHHHHHHHHHHHHH
T ss_pred EEEC-CCcHHHHHHHHHHHHH
Confidence 8886 6778899998888743
No 26
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.29 E-value=2.4e-12 Score=116.53 Aligned_cols=148 Identities=20% Similarity=0.261 Sum_probs=96.1
Q ss_pred cccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHh----------CCCEEEEeec
Q 041423 209 FETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLL----------NYDVYDLELT 278 (500)
Q Consensus 209 ~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l----------~~~i~~l~l~ 278 (500)
++.++|.++..+++++.+. ...+.+++|+||||+|||+++..+|..+ +..++.++++
T Consensus 21 ld~~igRd~Ei~~l~~iL~-------------r~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~~ 87 (195)
T d1jbka_ 21 LDPVIGRDEEIRRTIQVLQ-------------RRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 87 (195)
T ss_dssp SCCCCSCHHHHHHHHHHHT-------------SSSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECHH
T ss_pred CCCCcCcHHHHHHHHHHHh-------------ccCCCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEeeHH
Confidence 4567887766666654332 2335589999999999999999999844 6779999988
Q ss_pred ccC--------ChHHHHHHHHhh---cCCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCCCCCCcchhc
Q 041423 279 AVK--------DNTELRKLLIET---TSKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVT 347 (500)
Q Consensus 279 ~~~--------~~~~l~~l~~~~---~~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (500)
.+- -...+..++.+. ..+.||||||++.++. .... .+ +...
T Consensus 88 ~LiAg~~~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~---~g~~------------------------~g-~~d~ 139 (195)
T d1jbka_ 88 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVG---AGKA------------------------DG-AMDA 139 (195)
T ss_dssp HHHTTTCSHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT----------------------------------CCCC
T ss_pred HHhccCCccHHHHHHHHHHHHHHhcCCCcEEEEcchHHHHhc---CCCC------------------------CC-cccH
Confidence 762 223566777665 2367999999999753 1110 00 0001
Q ss_pred HhHHHHHHhhhhhccCCCeEEEEEcCCc-----CcccHHHhcCCeeeEEEEccCCCHHHHHHHH
Q 041423 348 LSGLLNFIDGLWSACGGERLIVFTTNYV-----EKLDPALIRRGRMDKHIELSYCTFQGFKVLA 406 (500)
Q Consensus 348 ls~lL~~ldg~~~~~~~~~ivI~TTN~~-----~~lD~aLlr~GR~d~~I~~~~p~~~~~~~l~ 406 (500)
-+-|.-.|. .++..+|++|... -.-||||.| || ..|.+..|+.++-..|+
T Consensus 140 ~~~Lkp~L~------rg~l~~IgatT~eey~~~~e~d~aL~r--rF-~~I~V~Ep~~e~t~~IL 194 (195)
T d1jbka_ 140 GNMLKPALA------RGELHCVGATTLDEYRQYIEKDAALER--RF-QKVFVAEPSVEDTIAIL 194 (195)
T ss_dssp HHHHHHHHH------TTSCCEEEEECHHHHHHHTTTCHHHHT--TE-EEEECCCCCHHHHHTTC
T ss_pred HHHHHHHHh------CCCceEEecCCHHHHHHHHHcCHHHHh--cC-CEeecCCCCHHHHHHHh
Confidence 122222222 2556667666532 234999999 89 55999999998876653
No 27
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=99.28 E-value=4.6e-12 Score=125.39 Aligned_cols=148 Identities=22% Similarity=0.274 Sum_probs=95.7
Q ss_pred CccccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhCC----------------
Q 041423 207 ATFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNY---------------- 270 (500)
Q Consensus 207 ~~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~---------------- 270 (500)
-+|.+|+|++..|..|.-.+.. +-..++||+||||||||++|+++|..|..
T Consensus 4 ~~f~~I~Gq~~~kral~laa~~-------------~~~h~vLl~G~pG~GKT~lar~~~~iLp~~~~~~~~~~~~~~~~~ 70 (333)
T d1g8pa_ 4 FPFSAIVGQEDMKLALLLTAVD-------------PGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEM 70 (333)
T ss_dssp CCGGGSCSCHHHHHHHHHHHHC-------------GGGCCEEEECCGGGCTTHHHHHHHHHSCCEEEETTCTTCCSSGGG
T ss_pred CChhhccCcHHHHHHHHHHHhc-------------cCCCeEEEECCCCccHHHHHHHHHHhCCCchhhccCccccCcccc
Confidence 3699999999999876432210 01237999999999999999999987621
Q ss_pred -----------------CEEEEeecccCChHHH------HHHHHh-----------hcCCeEEEecchhchhcccCcchh
Q 041423 271 -----------------DVYDLELTAVKDNTEL------RKLLIE-----------TTSKSIIVIEDIDCSLDLTGQRKK 316 (500)
Q Consensus 271 -----------------~i~~l~l~~~~~~~~l------~~l~~~-----------~~~~~Il~iDdiD~~~~~~g~~~~ 316 (500)
+++.... ..+...+ ...+.. .....|+|+|||+.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~~d~~~~~~~g~~~~~~G~l~~A~~gvl~iDEi~~~--------- 139 (333)
T d1g8pa_ 71 IPDWATVLSTNVIRKPTPVVDLPL--GVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLL--------- 139 (333)
T ss_dssp SCTTCCCSCCCEEEECCCEEEECT--TCCHHHHHCEECHHHHHHHCGGGEECCHHHHHTTEEEEETTGGGS---------
T ss_pred ccchhhccccCcccccCceeeccC--CCCcccccCcchhhhccccCcceeeccccccccccEeecccHHHH---------
Confidence 1111111 1122222 111111 113689999999873
Q ss_pred hhcccchHHHhhhhhhhhccCCCCCCcchhcHhHHHHHHhh---------hhhccCCCeEEEEEcCCc-CcccHHHhcCC
Q 041423 317 KAEKSSDDEKEKLDKEISRKEPKEEGSSKVTLSGLLNFIDG---------LWSACGGERLIVFTTNYV-EKLDPALIRRG 386 (500)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~lL~~ldg---------~~~~~~~~~ivI~TTN~~-~~lD~aLlr~G 386 (500)
...+++.|+..|+. .....+...++|+|+|.. ..+.+++++
T Consensus 140 ---------------------------~~~~~~aLl~~me~~~v~i~r~g~~~~~p~~f~liaa~Np~~~~l~~~llD-- 190 (333)
T d1g8pa_ 140 ---------------------------EDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLD-- 190 (333)
T ss_dssp ---------------------------CHHHHHHHHHHHHHSEEEECCTTCCEEEECCEEEEEEECSCSCCCCHHHHT--
T ss_pred ---------------------------HHHHHHHHhhhhcCCeEEecccCceecCCCCEEEEEecCccccccccchhh--
Confidence 23477888888862 211122346888888865 469999999
Q ss_pred eeeEEEEccCCC-HHHHHHHHH
Q 041423 387 RMDKHIELSYCT-FQGFKVLAK 407 (500)
Q Consensus 387 R~d~~I~~~~p~-~~~~~~l~~ 407 (500)
|||.+|.+++|. .+.+..+..
T Consensus 191 Rf~~~i~v~~~~~~~~~~~~~~ 212 (333)
T d1g8pa_ 191 RFGLSVEVLSPRDVETRVEVIR 212 (333)
T ss_dssp TCSEEEECCCCCSHHHHHHHHH
T ss_pred hhcceeeccCcchhhHHHHHHH
Confidence 999999999885 455555543
No 28
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.20 E-value=1.3e-10 Score=116.57 Aligned_cols=193 Identities=19% Similarity=0.278 Sum_probs=110.8
Q ss_pred cccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHh----------CCCEEEEeec
Q 041423 209 FETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLL----------NYDVYDLELT 278 (500)
Q Consensus 209 ~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l----------~~~i~~l~l~ 278 (500)
++.++|.++..+++++.+. ...+.+.+|.||||+|||+++..+|..+ +..++.+++.
T Consensus 21 ld~~~gr~~ei~~~~~~L~-------------r~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~~ 87 (387)
T d1qvra2 21 LDPVIGRDEEIRRVIQILL-------------RRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMG 87 (387)
T ss_dssp SCCCCSCHHHHHHHHHHHH-------------CSSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC-
T ss_pred CCCCcCcHHHHHHHHHHHh-------------cCCCCCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEEeeHh
Confidence 5667888877777766553 1234579999999999999999999743 5569999988
Q ss_pred ccCC--------hHHHHHHHHhh---cCCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCCCCCCcchhc
Q 041423 279 AVKD--------NTELRKLLIET---TSKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVT 347 (500)
Q Consensus 279 ~~~~--------~~~l~~l~~~~---~~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (500)
.+.. ...+..++... ..+.||||||++.++...+.. ....
T Consensus 88 ~l~ag~~~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~-----------------------------g~~d 138 (387)
T d1qvra2 88 SLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAE-----------------------------GAVD 138 (387)
T ss_dssp ----------CHHHHHHHHHHHHHTTCSSEEEEECCC-------------------------------------------
T ss_pred hhhcccCcchhHHHHHHHHHHHhccCCCceEEEeccHHHHhcCCCCC-----------------------------Cccc
Confidence 8732 23566666665 246789999999976321100 0111
Q ss_pred HhH-HHHHHhhhhhccCCCeEEEEEcC-----CcCcccHHHhcCCeeeEEEEccCCCHHHHHHHHHHhhcccc--chh--
Q 041423 348 LSG-LLNFIDGLWSACGGERLIVFTTN-----YVEKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNYLNVET--HTL-- 417 (500)
Q Consensus 348 ls~-lL~~ldg~~~~~~~~~ivI~TTN-----~~~~lD~aLlr~GR~d~~I~~~~p~~~~~~~l~~~~l~~~~--~~l-- 417 (500)
... |.-.| . .++.-+|++|. ..+. |+||.| ||.. |.+..|+.++-..|++....... |..
T Consensus 139 ~a~~Lkp~L-----~-rg~~~~I~~tT~~ey~~~e~-d~al~r--rF~~-v~v~ep~~~~~~~il~~~~~~~e~~h~v~~ 208 (387)
T d1qvra2 139 AGNMLKPAL-----A-RGELRLIGATTLDEYREIEK-DPALER--RFQP-VYVDEPTVEETISILRGLKEKYEVHHGVRI 208 (387)
T ss_dssp -----HHHH-----H-TTCCCEEEEECHHHHHHHTT-CTTTCS--CCCC-EEECCCCHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHH-----h-CCCcceeeecCHHHHHHhcc-cHHHHH--hccc-ccCCCCcHHHHHHHHHHHHHHHHhccCCcc
Confidence 111 22222 1 24455555553 2344 899999 8844 99999999999999886654321 211
Q ss_pred -HHHHHHHhhcCCCCHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHhH
Q 041423 418 -FETIQKLMEDTKITPADVAENLMPKSPSDNVEKCLSSLIQALKEGK 463 (500)
Q Consensus 418 -~~~i~~l~~~~~~spa~i~~~l~~~~~~~~~~~~~~~l~~~l~~~~ 463 (500)
.+.+... .++...++. .+..|+.|++-+-.+..+.+
T Consensus 209 ~~~ai~~~--------v~ls~ryi~--~r~~PdKAidlld~a~a~~~ 245 (387)
T d1qvra2 209 SDSAIIAA--------ATLSHRYIT--ERRLPDKAIDLIDEAAARLR 245 (387)
T ss_dssp CHHHHHHH--------HHHHHHHCC--SSCTHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHH--------HHhcccccc--cccChhhHHHHHHHHHHHHH
Confidence 1112221 233444443 67788888876655554443
No 29
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.08 E-value=7.7e-10 Score=100.86 Aligned_cols=113 Identities=12% Similarity=0.126 Sum_probs=84.5
Q ss_pred ccceeeeCCCCCcHHHHHHHHHHHhC------CCEEEEeecccC-ChHHHHHHHHhhc------CCeEEEecchhchhcc
Q 041423 244 KRGYLLYGPPGTGKSTMIAAMANLLN------YDVYDLELTAVK-DNTELRKLLIETT------SKSIIVIEDIDCSLDL 310 (500)
Q Consensus 244 ~rg~LL~GPpGtGKTsla~aiA~~l~------~~i~~l~l~~~~-~~~~l~~l~~~~~------~~~Il~iDdiD~~~~~ 310 (500)
+..+||+||||||||++|..+|+++. .+++.+....-. .-+.++.+..... ..-|++|||+|.+-
T Consensus 15 ~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~~~I~Id~IR~i~~~~~~~~~~~~~KviIId~ad~l~-- 92 (198)
T d2gnoa2 15 GISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEGENIGIDDIRTIKDFLNYSPELYTRKYVIVHDCERMT-- 92 (198)
T ss_dssp SEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSSSCBCHHHHHHHHHHHTSCCSSSSSEEEEETTGGGBC--
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHhccccCCCCEEEEeCCcCCCCHHHHHHHHHHHhhCcccCCCEEEEEeCccccc--
Confidence 34799999999999999999999773 468888764322 3456666654442 34599999999852
Q ss_pred cCcchhhhcccchHHHhhhhhhhhccCCCCCCcchhcHhHHHHHHhhhhhccCCCeEEEEEcCCcCcccHHHhcCCeeeE
Q 041423 311 TGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDK 390 (500)
Q Consensus 311 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~lL~~ldg~~~~~~~~~ivI~TTN~~~~lD~aLlr~GR~d~ 390 (500)
....+.||..|+.. +.+.++|++||+++.|.|+++.|++.
T Consensus 93 ----------------------------------~~aqNaLLK~LEEP----p~~t~fiLit~~~~~ll~TI~SRC~~-- 132 (198)
T d2gnoa2 93 ----------------------------------QQAANAFLKALEEP----PEYAVIVLNTRRWHYLLPTIKSRVFR-- 132 (198)
T ss_dssp ----------------------------------HHHHHHTHHHHHSC----CTTEEEEEEESCGGGSCHHHHTTSEE--
T ss_pred ----------------------------------hhhhhHHHHHHhCC----CCCceeeeccCChhhCHHHHhcceEE--
Confidence 23456788888753 45689999999999999999996554
Q ss_pred EEEccCCCH
Q 041423 391 HIELSYCTF 399 (500)
Q Consensus 391 ~I~~~~p~~ 399 (500)
+.|+.|..
T Consensus 133 -i~~~~p~~ 140 (198)
T d2gnoa2 133 -VVVNVPKE 140 (198)
T ss_dssp -EECCCCHH
T ss_pred -EeCCCchH
Confidence 88887753
No 30
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=98.87 E-value=4.3e-09 Score=107.26 Aligned_cols=70 Identities=19% Similarity=0.232 Sum_probs=53.7
Q ss_pred ccCChhhHHHHHHHHHHHhhChHHHH-hhCCCcccceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecccC
Q 041423 212 MALEPEKKLEIIEDLVTFSKSRDFYA-RIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVK 281 (500)
Q Consensus 212 l~~~~~~k~~l~~~l~~~~~~~~~~~-~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~~ 281 (500)
|+|+++.|+.+.-.+.+-+++...-. ...-..|.++||.||||||||.||++||..++.||+.++++.+.
T Consensus 16 VvGQ~~AKk~lsvav~nhyrR~~~~~~~~~ei~ksNILliGPTGvGKTlLAr~LAk~l~VPFv~~daT~fT 86 (443)
T d1g41a_ 16 IIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFT 86 (443)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEGGGGC
T ss_pred ccCcHHHHHHHHHHHHHHHHHhhcccccccccccccEEEECCCCCCHHHHHHHHHHHhCCCEEEeecceee
Confidence 78999999999777765443211000 01122466999999999999999999999999999999999873
No 31
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.83 E-value=1.9e-08 Score=94.75 Aligned_cols=56 Identities=21% Similarity=0.125 Sum_probs=43.9
Q ss_pred ccccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeeccc
Q 041423 208 TFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAV 280 (500)
Q Consensus 208 ~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~ 280 (500)
.-+.++|-++..++|.+ ..++.++|+||+|+|||+|++.++..++.++..+++...
T Consensus 10 ~~~~f~GR~~el~~l~~-----------------~~~~~i~i~G~~G~GKTsLl~~~~~~~~~~~~~i~~~~~ 65 (283)
T d2fnaa2 10 NRKDFFDREKEIEKLKG-----------------LRAPITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKF 65 (283)
T ss_dssp SGGGSCCCHHHHHHHHH-----------------TCSSEEEEEESTTSSHHHHHHHHHHHHTCCEEEEEGGGG
T ss_pred ChhhCCChHHHHHHHHh-----------------ccCCEEEEEcCCCCcHHHHHHHHHHHCCCCeEEEEeccc
Confidence 45778888766555532 134679999999999999999999999999888877654
No 32
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=98.79 E-value=1.2e-09 Score=103.63 Aligned_cols=59 Identities=17% Similarity=0.276 Sum_probs=45.6
Q ss_pred hhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeeccc
Q 041423 217 EKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAV 280 (500)
Q Consensus 217 ~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~ 280 (500)
+.+..+.+.+..+..+ ..+...|+|+|||||||||||++|+++|++++.+++.++.+.+
T Consensus 10 ~~~~~~~~~~~~~~~~-----~~~~~~P~~ilL~GpPGtGKT~la~~la~~~~~~~~~i~~d~~ 68 (273)
T d1gvnb_ 10 QFENRLNDNLEELIQG-----KKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTF 68 (273)
T ss_dssp HHHHHHHHHHHHHHTT-----CCCCSSCEEEEEECCTTSCTHHHHHHHHHHTTTCCEEECTHHH
T ss_pred HHHHHHHHHHHHHHhc-----ccCCCCCEEEEEECCCCCCHHHHHHHHHHHhhcceEEEecHHH
Confidence 3445555555555443 2356678899999999999999999999999999999887654
No 33
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=98.74 E-value=1e-07 Score=89.41 Aligned_cols=85 Identities=18% Similarity=0.240 Sum_probs=63.3
Q ss_pred ccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHh---CCCEEEEeecccCChHHHHH
Q 041423 212 MALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLL---NYDVYDLELTAVKDNTELRK 288 (500)
Q Consensus 212 l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l---~~~i~~l~l~~~~~~~~l~~ 288 (500)
.+|.....+++++.+...... ...+||+||+|||||.+|++|.... ..+++.+++..+........
T Consensus 2 ~v~~S~~~~~~~~~~~~~a~~-----------~~pvlI~Ge~GtGK~~~A~~ih~~s~~~~~~~~~~~~~~~~~~~~~~~ 70 (247)
T d1ny5a2 2 YVFESPKMKEILEKIKKISCA-----------ECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAE 70 (247)
T ss_dssp CCCCSHHHHHHHHHHHHHTTC-----------CSCEEEECSTTSSHHHHHHHHHHHSTTTTSCEEEEETTTSCHHHHHHH
T ss_pred eEecCHHHHHHHHHHHHHhCC-----------CCCEEEECCCCcCHHHHHHHHHHhcCCcccccccchhhhhhhcccHHH
Confidence 467777788888887766554 3469999999999999999998765 44588888888765554555
Q ss_pred HHHhh-----------------cCCeEEEecchhch
Q 041423 289 LLIET-----------------TSKSIIVIEDIDCS 307 (500)
Q Consensus 289 l~~~~-----------------~~~~Il~iDdiD~~ 307 (500)
+|+.. ...+.|||||||.+
T Consensus 71 lfg~~~~~~~~~~~~~~g~l~~a~gGtL~l~~i~~L 106 (247)
T d1ny5a2 71 LFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGEL 106 (247)
T ss_dssp HHCBCTTSSTTCCSCBCCHHHHTTTSEEEEESGGGC
T ss_pred hcCcccCCcCCcccccCCHHHccCCCEEEEeChHhC
Confidence 55321 23568999999985
No 34
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=98.35 E-value=1.3e-06 Score=76.45 Aligned_cols=27 Identities=26% Similarity=0.555 Sum_probs=24.3
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEE
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVY 273 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~ 273 (500)
++|.||||||||||+++|++.+..+..
T Consensus 3 i~I~G~~G~GKSTLl~~i~~~l~~~~g 29 (178)
T d1ye8a1 3 IIITGEPGVGKTTLVKKIVERLGKRAI 29 (178)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHGGGEE
T ss_pred EEEECCCCcHHHHHHHHHHhcCCCCcc
Confidence 789999999999999999999977643
No 35
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=98.11 E-value=7.9e-07 Score=76.23 Aligned_cols=31 Identities=48% Similarity=0.757 Sum_probs=28.3
Q ss_pred ccceeeeCCCCCcHHHHHHHHHHHhCCCEEE
Q 041423 244 KRGYLLYGPPGTGKSTMIAAMANLLNYDVYD 274 (500)
Q Consensus 244 ~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~ 274 (500)
++.++|.|||||||||+++.||..|+.+++.
T Consensus 2 ~k~I~l~G~~GsGKSTvak~La~~L~~~~id 32 (169)
T d1kaga_ 2 KRNIFLVGPMGAGKSTIGRQLAQQLNMEFYD 32 (169)
T ss_dssp CCCEEEECCTTSCHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhCCCeEe
Confidence 3578999999999999999999999999874
No 36
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=98.02 E-value=1.2e-06 Score=78.41 Aligned_cols=60 Identities=20% Similarity=0.303 Sum_probs=42.8
Q ss_pred CCCcccceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecccCChHHHHHHHHhhcCCeEEEecchh
Q 041423 240 GKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDID 305 (500)
Q Consensus 240 g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~~~~~~l~~l~~~~~~~~Il~iDdiD 305 (500)
|.|.++.++|||||+||||+++.+|++.++-.+ ++..... ..-.+......-++++||+-
T Consensus 49 ~~PKkn~i~~~GP~~TGKS~f~~sl~~~l~G~v--is~~N~~----s~F~Lq~l~~~kv~l~dD~t 108 (205)
T d1tuea_ 49 GTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAV--ISFVNST----SHFWLEPLTDTKVAMLDDAT 108 (205)
T ss_dssp TCTTCSEEEEESCGGGCHHHHHHHHHHHHTCEE--CCCCCSS----SCGGGGGGTTCSSEEEEEEC
T ss_pred CCCCceEEEEECCCCccHHHHHHHHHHHhCCEE--EeccCCC----CCcccccccCCeEEEEeccc
Confidence 567778899999999999999999999997543 2322211 12334455567888999974
No 37
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=98.02 E-value=9e-05 Score=69.91 Aligned_cols=48 Identities=19% Similarity=0.130 Sum_probs=35.1
Q ss_pred cccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHh
Q 041423 211 TMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 211 ~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l 268 (500)
++.|.+...++|++.+...-.. ..+-+.|||++|.|||+||+.+++..
T Consensus 21 ~~~gR~~~~~~i~~~L~~~~~~----------~~~~v~I~GmgGiGKTtLA~~v~~~~ 68 (277)
T d2a5yb3 21 TCYIREYHVDRVIKKLDEMCDL----------DSFFLFLHGRAGSGKSVIASQALSKS 68 (277)
T ss_dssp CSCCCHHHHHHHHHHHHHHTTS----------SSEEEEEECSTTSSHHHHHHHHHHHC
T ss_pred ceeCcHHHHHHHHHHHHhccCC----------CceEEEEECCCCCCHHHHHHHHHHhh
Confidence 3567888888887776542221 12357899999999999999998863
No 38
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=97.97 E-value=1.5e-06 Score=75.98 Aligned_cols=31 Identities=19% Similarity=0.297 Sum_probs=27.8
Q ss_pred ccceeeeCCCCCcHHHHHHHHHHHhCCCEEE
Q 041423 244 KRGYLLYGPPGTGKSTMIAAMANLLNYDVYD 274 (500)
Q Consensus 244 ~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~ 274 (500)
.+.++|.|||||||||||++||..++.+++.
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~~~~~i~ 37 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVFNTTSAW 37 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTTCEEEC
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhCCCeEe
Confidence 3579999999999999999999999988764
No 39
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=97.96 E-value=6.7e-07 Score=82.53 Aligned_cols=147 Identities=19% Similarity=0.225 Sum_probs=69.2
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecccC--ChHHHHHHHHhhcC-----CeEEEecchhchhcccCcchhhhc
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVK--DNTELRKLLIETTS-----KSIIVIEDIDCSLDLTGQRKKKAE 319 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~~--~~~~l~~l~~~~~~-----~~Il~iDdiD~~~~~~g~~~~~~~ 319 (500)
+.|.||+|||||||++.|++.+.++-..+-+.... .....++-++..++ +..-+.|++.......|..+....
T Consensus 29 ~~liGpsGsGKSTLl~~i~Gl~~p~sG~I~i~g~~i~~~~~~~r~ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~ 108 (232)
T d2awna2 29 VVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVIN 108 (232)
T ss_dssp EEEECCTTSSHHHHHHHHHTSSCCSEEEEEESSSCCTTSCGGGTCEEEECSSCCC---------------------CHHH
T ss_pred EEEECCCCChHHHHHHHHhcCCCCCCCEEEECCEECCCCchhhceeeeeccccccccchhHHHHHHHHHHHcCCCHHHHH
Confidence 78999999999999999999999887777555431 11111111111222 344466777654444444333333
Q ss_pred ccchHHHhhhhhhhhccCC--------------------------CCCCcchhcHh---HHHHHHhhhhhccCCCeEEEE
Q 041423 320 KSSDDEKEKLDKEISRKEP--------------------------KEEGSSKVTLS---GLLNFIDGLWSACGGERLIVF 370 (500)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~ls---~lL~~ldg~~~~~~~~~ivI~ 370 (500)
..+.+.++.++........ .+++.+..+.. .+++.+-.+... .+..+|+
T Consensus 109 ~~v~~~l~~~~l~~~~~~~~~~LSGGqkQRvaiAraL~~~P~illlDEPts~LD~~~~~~i~~~l~~l~~~--~g~tii~ 186 (232)
T d2awna2 109 QRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKR--LGRTMIY 186 (232)
T ss_dssp HHHHHHHHHC---------------------CHHHHHHTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHH--SCCEEEE
T ss_pred HHHHHHHHhCCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHh--cCCEEEE
Confidence 3344444443332110000 01445544443 444444444332 3578999
Q ss_pred EcCCcCcccH-----HHhcCCeeeEEEEccCCC
Q 041423 371 TTNYVEKLDP-----ALIRRGRMDKHIELSYCT 398 (500)
Q Consensus 371 TTN~~~~lD~-----aLlr~GR~d~~I~~~~p~ 398 (500)
+|++.+.+-. ++++.|++ ++.+.|.
T Consensus 187 vTHd~~~a~~~~dri~vm~~G~i---v~~G~~~ 216 (232)
T d2awna2 187 VTHDQVEAMTLADKIVVLDAGRV---AQVGKPL 216 (232)
T ss_dssp EESCHHHHHHHCSEEEEEETTEE---EEEECHH
T ss_pred EeCCHHHHHHhCCEEEEEECCEE---EEEeCHH
Confidence 9998765432 56677887 7776553
No 40
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=97.91 E-value=3.4e-06 Score=78.09 Aligned_cols=147 Identities=18% Similarity=0.226 Sum_probs=82.5
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecccC----ChHHHHHH---HHhhcC-----CeEEEecchhchhcccCcc
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVK----DNTELRKL---LIETTS-----KSIIVIEDIDCSLDLTGQR 314 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~~----~~~~l~~l---~~~~~~-----~~Il~iDdiD~~~~~~g~~ 314 (500)
+.|.||+|||||||++.|++...++-..+.+.... +..++..+ ++..++ +..-++|++...+.+.|..
T Consensus 34 ~~iiG~sGsGKSTLl~~i~Gl~~p~sG~I~~~g~~i~~~~~~~~~~~rr~ig~VfQ~~~l~~~~tv~eni~~~l~~~~~~ 113 (240)
T d3dhwc1 34 YGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTP 113 (240)
T ss_dssp EEEEESTTSSHHHHHHHHTTSSCCSEEEEEETTEEECTTCHHHHHHHHHHEEECCSSCCCCTTSBHHHHHHHHHHTTTCC
T ss_pred EEEECCCCCCHHHHHHHHcCCccccCCceEEcCeEeeeCChhhhhhhhccccccccccccCCCccHHHHHHHHHHHcCCC
Confidence 78999999999999999999999887777665431 33444333 222232 3334667766544444544
Q ss_pred hhhhcccchHHHhhhhhhhhccCC--------------------------CCCCcchhcH---hHHHHHHhhhhhccCCC
Q 041423 315 KKKAEKSSDDEKEKLDKEISRKEP--------------------------KEEGSSKVTL---SGLLNFIDGLWSACGGE 365 (500)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~l---s~lL~~ldg~~~~~~~~ 365 (500)
+......+.+.++.++........ .+++.+..+. ..+++.+..+... .+
T Consensus 114 ~~~~~~~v~~~L~~vgL~~~~~~~~~~LSGG~~QRvaiAraL~~~P~lLllDEPt~~LD~~~~~~i~~~l~~l~~~--~g 191 (240)
T d3dhwc1 114 KDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRR--LG 191 (240)
T ss_dssp TTHHHHHHHHHHHHHSTTTTTSSCBSCCCHHHHHHHHHHHHHHTCCSEEEEESGGGSSCHHHHHHHHHHHHHHHHH--HC
T ss_pred HHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHhhhhccCCCeEEeccccccCCHHHhhHHHHHHHHHHhc--cC
Confidence 333333444445544443221111 0144444333 3334444443221 25
Q ss_pred eEEEEEcCCcCcccH-----HHhcCCeeeEEEEccCCC
Q 041423 366 RLIVFTTNYVEKLDP-----ALIRRGRMDKHIELSYCT 398 (500)
Q Consensus 366 ~ivI~TTN~~~~lD~-----aLlr~GR~d~~I~~~~p~ 398 (500)
..||++|++.+.+-. +++..|++ ++.+.|+
T Consensus 192 ~tvi~vTHdl~~~~~~~dri~vl~~G~i---v~~G~~~ 226 (240)
T d3dhwc1 192 LTILLITHEMDVVKRICDCVAVISNGEL---IEQDTVS 226 (240)
T ss_dssp CEEEEEBSCHHHHHHHCSEEEEEETTEE---EEEEETT
T ss_pred CEEEEEcCCHHHHHHhCCEEEEEECCEE---EEECCHH
Confidence 789999998765422 55566777 6666665
No 41
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=97.89 E-value=1e-06 Score=81.55 Aligned_cols=148 Identities=18% Similarity=0.151 Sum_probs=78.9
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeeccc--CChHHHHHHHHhhcC-----CeEEEecchhchhcccCcchhhh
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAV--KDNTELRKLLIETTS-----KSIIVIEDIDCSLDLTGQRKKKA 318 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~--~~~~~l~~l~~~~~~-----~~Il~iDdiD~~~~~~g~~~~~~ 318 (500)
-+.|.||+|||||||++.|++.+.++-..+-+... ......++-++..++ +..-+.|++.......+..+...
T Consensus 34 ~~~liGpsGaGKSTLl~~i~Gl~~p~sG~I~i~g~~i~~~~~~~r~ig~v~Q~~~l~~~ltv~enl~~~~~~~~~~~~~~ 113 (239)
T d1v43a3 34 FLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKDRNISMVFQSYAVWPHMTVYENIAFPLKIKKFPKDEI 113 (239)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGGGGTEEEEEC------CCCHHHHHHTTCC--CCCHHHH
T ss_pred EEEEECCCCChHHHHHHHHHcCCCCCCCEEEEcceecccCCcccceEEEEeechhhcccchHHHHHHHHHHHcCCCHHHH
Confidence 37899999999999999999999998777655543 111111111222222 12224556654444444444333
Q ss_pred cccchHHHhhhhhhhhccCC--------------------------CCCCcchhc---HhHHHHHHhhhhhccCCCeEEE
Q 041423 319 EKSSDDEKEKLDKEISRKEP--------------------------KEEGSSKVT---LSGLLNFIDGLWSACGGERLIV 369 (500)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~---ls~lL~~ldg~~~~~~~~~ivI 369 (500)
...+.+.++.++.....+.. .+++.+..+ -..+++.+..+... .+..+|
T Consensus 114 ~~~~~~~l~~~~l~~~~~~~~~~LSGGq~QRvaiAraL~~~P~iLllDEPts~LD~~~~~~i~~ll~~l~~~--~g~tii 191 (239)
T d1v43a3 114 DKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQK--LKVTTI 191 (239)
T ss_dssp HHHHHHHHHHTTCGGGTTSCTTTCCSSCHHHHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHH--HTCEEE
T ss_pred HHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHhhhccCCCceeecCCcccCCHHHHHHHHHHHHHHHHh--cCCeEE
Confidence 34444444444443221111 014444443 34444444444322 257899
Q ss_pred EEcCCcCcccH-----HHhcCCeeeEEEEccCCC
Q 041423 370 FTTNYVEKLDP-----ALIRRGRMDKHIELSYCT 398 (500)
Q Consensus 370 ~TTN~~~~lD~-----aLlr~GR~d~~I~~~~p~ 398 (500)
++|++.+..-. ++++.||+ ++-+.|+
T Consensus 192 ~vTHd~~~a~~~~dri~vm~~G~i---v~~G~~~ 222 (239)
T d1v43a3 192 YVTHDQVEAMTMGDRIAVMNRGQL---LQIGSPT 222 (239)
T ss_dssp EEESCHHHHHHHCSEEEEEETTEE---EEEECHH
T ss_pred EEeCCHHHHHHhCCEEEEEECCEE---EEEcCHH
Confidence 99998765432 55677777 6665443
No 42
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=97.89 E-value=3e-06 Score=73.38 Aligned_cols=29 Identities=31% Similarity=0.479 Sum_probs=26.9
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCCCEEE
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNYDVYD 274 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~~i~~ 274 (500)
.++|.|||||||||+++.||..++++++.
T Consensus 6 ~I~i~G~pGsGKTTia~~La~~l~~~~i~ 34 (173)
T d1rkba_ 6 NILLTGTPGVGKTTLGKELASKSGLKYIN 34 (173)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHHCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCcEEe
Confidence 57899999999999999999999999875
No 43
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=97.89 E-value=2.3e-06 Score=74.39 Aligned_cols=30 Identities=33% Similarity=0.419 Sum_probs=28.0
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCCCEEEE
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNYDVYDL 275 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~~i~~l 275 (500)
+++|.||||+||||+++++|..||++++++
T Consensus 2 ~I~liG~~GsGKsTi~k~La~~l~~~~~d~ 31 (161)
T d1viaa_ 2 NIVFIGFMGSGKSTLARALAKDLDLVFLDS 31 (161)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHTCEEEEH
T ss_pred cEEEECCCCCCHHHHHHHHHHHhCCCEEec
Confidence 588999999999999999999999999874
No 44
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=97.88 E-value=1.3e-06 Score=81.04 Aligned_cols=49 Identities=24% Similarity=0.356 Sum_probs=35.7
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeeccc---CChHHHHHHHHhhc
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAV---KDNTELRKLLIETT 294 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~---~~~~~l~~l~~~~~ 294 (500)
-+.|.||+|+|||||+++|++.+.++-..+.+... .....+++.+...+
T Consensus 30 i~glvG~nGaGKSTLl~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~i~~vp 81 (238)
T d1vpla_ 30 IFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNVVEEPHEVRKLISYLP 81 (238)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEETTTCHHHHHTTEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCCCCEEEECcEecccChHHHHhhEeEee
Confidence 37799999999999999999999998777766543 23334444433333
No 45
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=97.81 E-value=3.8e-06 Score=73.49 Aligned_cols=31 Identities=26% Similarity=0.444 Sum_probs=28.2
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHhCCCEEEE
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLLNYDVYDL 275 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l 275 (500)
+.++|.|||||||||+++.+|..||+++++.
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~Lg~~~id~ 33 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARALGYEFVDT 33 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHTCEEEEH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHhCCCEEeh
Confidence 4688999999999999999999999998863
No 46
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.81 E-value=3.6e-06 Score=73.19 Aligned_cols=33 Identities=39% Similarity=0.495 Sum_probs=29.5
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHhCCCEEEEee
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLLNYDVYDLEL 277 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l 277 (500)
+-++|.|||||||||+++++|..++.+++.++.
T Consensus 5 ~iI~l~G~~GsGKSTia~~La~~lg~~~~~~~~ 37 (176)
T d1zp6a1 5 NILLLSGHPGSGKSTIAEALANLPGVPKVHFHS 37 (176)
T ss_dssp EEEEEEECTTSCHHHHHHHHHTCSSSCEEEECT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCEEEecH
Confidence 347899999999999999999999999987764
No 47
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=97.79 E-value=7.5e-06 Score=70.96 Aligned_cols=33 Identities=21% Similarity=0.343 Sum_probs=29.5
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHhCCCEEEEee
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLLNYDVYDLEL 277 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l 277 (500)
+-++|.||||+||||++++||..++.+.+.++.
T Consensus 4 kiI~l~G~~GsGKsTva~~L~~~l~~~~~~~~~ 36 (178)
T d1qhxa_ 4 RMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGV 36 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHSSSCEEEEEH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHcCCCeEEeec
Confidence 468899999999999999999999998877664
No 48
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=97.78 E-value=1.3e-05 Score=74.16 Aligned_cols=53 Identities=17% Similarity=0.173 Sum_probs=40.0
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeeccc----CChHHHHHHHHhhcCCeE
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAV----KDNTELRKLLIETTSKSI 298 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~----~~~~~l~~l~~~~~~~~I 298 (500)
-+.+.||+|+|||||++.|++.+.+.-..|.+... .+...+++.+...++...
T Consensus 31 ~vaIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~ 87 (241)
T d2pmka1 31 VIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNV 87 (241)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCC
T ss_pred EEEEECCCCCCHHHHHHHHHhcCCCCCCEEEECCEEecccchhhhhceEEEEecccc
Confidence 48899999999999999999999888776665543 244566766666665443
No 49
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=97.75 E-value=2.5e-05 Score=71.47 Aligned_cols=33 Identities=24% Similarity=0.490 Sum_probs=28.7
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecc
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYDLELTA 279 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~ 279 (500)
+.|.||+|||||||+++|++.+.++-..+-+..
T Consensus 29 ~~liGpsGaGKSTll~~l~Gl~~p~sG~I~~~G 61 (229)
T d3d31a2 29 FVILGPTGAGKTLFLELIAGFHVPDSGRILLDG 61 (229)
T ss_dssp EEEECCCTHHHHHHHHHHHTSSCCSEEEEEETT
T ss_pred EEEECCCCCcHHHHHHHHhcCcCCCCCEEEEcc
Confidence 889999999999999999999988877665543
No 50
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.73 E-value=5.9e-06 Score=71.79 Aligned_cols=30 Identities=37% Similarity=0.555 Sum_probs=26.9
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEEEe
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYDLE 276 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~l~ 276 (500)
++|.|+|||||||+++.+|..|+.++++++
T Consensus 4 IvliG~~G~GKSTig~~La~~l~~~fiD~D 33 (165)
T d2iyva1 4 AVLVGLPGSGKSTIGRRLAKALGVGLLDTD 33 (165)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTCCEEEHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCCeEeec
Confidence 667799999999999999999999998643
No 51
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=97.72 E-value=1.5e-06 Score=80.54 Aligned_cols=33 Identities=27% Similarity=0.437 Sum_probs=28.1
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecc
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYDLELTA 279 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~ 279 (500)
+.|.||+|||||||+++|++.+.++-..+-+..
T Consensus 32 ~~liG~sGaGKSTll~~i~gl~~p~sG~I~~~g 64 (240)
T d1g2912 32 MILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGD 64 (240)
T ss_dssp EEEECSTTSSHHHHHHHHHTSSCCSEEEEEETT
T ss_pred EEEECCCCChHHHHHHHHhcCCCCCCCEEEECC
Confidence 789999999999999999999988866664443
No 52
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=97.71 E-value=8.2e-06 Score=70.34 Aligned_cols=29 Identities=38% Similarity=0.681 Sum_probs=25.6
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHhCCCEE
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLLNYDVY 273 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l~~~i~ 273 (500)
+-++|.|||||||||+|+.||..++..++
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~~~~~~ 31 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQLDNSAY 31 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSSSEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHcCCCEE
Confidence 45889999999999999999999987654
No 53
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=97.70 E-value=4.9e-05 Score=70.81 Aligned_cols=53 Identities=19% Similarity=0.290 Sum_probs=37.4
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecccC----ChHHHHHHHHhhcCCe
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVK----DNTELRKLLIETTSKS 297 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~~----~~~~l~~l~~~~~~~~ 297 (500)
.-+.|.||+|||||||++.|++.+.+.-..|.+.... +...++..+...++..
T Consensus 42 e~iaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~ 98 (253)
T d3b60a1 42 KTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNV 98 (253)
T ss_dssp CEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTEETTTBCHHHHHHTEEEECSSC
T ss_pred CEEEEECCCCChHHHHHHHHhcccCCCccEEEECCcccchhhhhhhhheEEEEeecc
Confidence 3488999999999999999999998887776655431 3344554444444433
No 54
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=97.69 E-value=1e-05 Score=69.99 Aligned_cols=30 Identities=33% Similarity=0.538 Sum_probs=26.3
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHhCCCEEE
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLLNYDVYD 274 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l~~~i~~ 274 (500)
+-++|.|||||||||++++||..++.+.+.
T Consensus 7 ~iivl~G~~GsGKsT~a~~La~~l~~~~~~ 36 (171)
T d1knqa_ 7 HIYVLMGVSGSGKSAVASEVAHQLHAAFLD 36 (171)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHHTCEEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCeec
Confidence 347889999999999999999999887654
No 55
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.67 E-value=9.1e-06 Score=70.74 Aligned_cols=24 Identities=46% Similarity=0.850 Sum_probs=22.6
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHh
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l 268 (500)
|+++|+||||||||||+++++..+
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l 25 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVL 25 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHHHHH
Confidence 579999999999999999999987
No 56
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=97.63 E-value=2.2e-05 Score=73.34 Aligned_cols=41 Identities=29% Similarity=0.521 Sum_probs=32.8
Q ss_pred hCCCcccc--eeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecc
Q 041423 239 IGKAWKRG--YLLYGPPGTGKSTMIAAMANLLNYDVYDLELTA 279 (500)
Q Consensus 239 ~g~~~~rg--~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~ 279 (500)
+.+..++| +.|.||+|+|||||+++|++.+.++-..+.+..
T Consensus 23 vs~~v~~Gei~~liG~nGaGKSTLl~~i~Gl~~p~~G~I~~~g 65 (254)
T d1g6ha_ 23 VSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFEN 65 (254)
T ss_dssp ECCEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETT
T ss_pred eEEEECCCCEEEEECCCCCcHHHHHHHHHCCCcCCCcEEEECC
Confidence 33444455 789999999999999999999998877766554
No 57
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=97.61 E-value=0.00014 Score=68.26 Aligned_cols=60 Identities=20% Similarity=0.243 Sum_probs=41.8
Q ss_pred CCCcccceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecccCChHHHHHHHHhhcCCeEEEecchhc
Q 041423 240 GKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDC 306 (500)
Q Consensus 240 g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~~~~~~l~~l~~~~~~~~Il~iDdiD~ 306 (500)
+.+.+..++|+|||+||||+++.+|+..+|.. ..++ ...+. --+......-++++||.+.
T Consensus 100 ~~~k~n~~~l~G~~~tGKS~f~~~i~~~lg~~-~~~~--~~~~~----f~l~~l~~k~~~~~~e~~~ 159 (267)
T d1u0ja_ 100 KFGKRNTIWLFGPATTGKTNIAEAIAHTVPFY-GCVN--WTNEN----FPFNDCVDKMVIWWEEGKM 159 (267)
T ss_dssp CSTTCCEEEEECSTTSSHHHHHHHHHHHSSCE-EECC--TTCSS----CTTGGGSSCSEEEECSCCE
T ss_pred CCCccEEEEEEcCCCCCHHHHHHHHHHHhcch-hhcc--ccCCC----ccccccCCCEEEEEeCCCc
Confidence 34666778999999999999999999999643 3222 11111 1234556778889999764
No 58
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=97.61 E-value=5e-05 Score=70.74 Aligned_cols=53 Identities=17% Similarity=0.181 Sum_probs=38.3
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeeccc----CChHHHHHHHHhhcCCe
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAV----KDNTELRKLLIETTSKS 297 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~----~~~~~l~~l~~~~~~~~ 297 (500)
.-+.|.||+|+|||||++.|++.+.+.-..+.+... .+...+++.+...++..
T Consensus 45 e~vaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~ 101 (255)
T d2hyda1 45 ETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDN 101 (255)
T ss_dssp CEEEEECSTTSSHHHHHTTTTTSSCCSEEEEEETTEEGGGSCHHHHHHTEEEECSSC
T ss_pred CEEEEECCCCCcHHHHHHHHHhcCCccccccccCCEEcccCCHHHhhheeeeeeccc
Confidence 348999999999999999999999888766655443 13455665555555443
No 59
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.57 E-value=3.6e-06 Score=77.72 Aligned_cols=33 Identities=30% Similarity=0.588 Sum_probs=28.1
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecc
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYDLELTA 279 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~ 279 (500)
+.|.||+|||||||++.|++.+.++-..+.+..
T Consensus 27 ~~liGpnGaGKSTll~~i~Gl~~p~~G~I~~~G 59 (240)
T d2onka1 27 CVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNG 59 (240)
T ss_dssp EEEECCTTSSHHHHHHHHHTSSCCSEEEEEETT
T ss_pred EEEECCCCChHHHHHHHHHcCCCCCceEEEECC
Confidence 458899999999999999999998877765554
No 60
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=97.57 E-value=2.2e-05 Score=67.86 Aligned_cols=27 Identities=37% Similarity=0.545 Sum_probs=24.0
Q ss_pred ccceeeeCCCCCcHHHHHHHHHHHhCC
Q 041423 244 KRGYLLYGPPGTGKSTMIAAMANLLNY 270 (500)
Q Consensus 244 ~rg~LL~GPpGtGKTsla~aiA~~l~~ 270 (500)
+-.++|.|||||||||+++.||..++.
T Consensus 5 ~~~I~i~G~~GsGKTT~~~~La~~l~~ 31 (174)
T d1y63a_ 5 GINILITGTPGTGKTSMAEMIAAELDG 31 (174)
T ss_dssp SCEEEEECSTTSSHHHHHHHHHHHSTT
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHhCC
Confidence 344999999999999999999999864
No 61
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=97.56 E-value=2.9e-06 Score=78.51 Aligned_cols=38 Identities=26% Similarity=0.440 Sum_probs=30.6
Q ss_pred Ccccc--eeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecc
Q 041423 242 AWKRG--YLLYGPPGTGKSTMIAAMANLLNYDVYDLELTA 279 (500)
Q Consensus 242 ~~~rg--~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~ 279 (500)
..++| +.|.||+|||||||+++|++...++-..+-+..
T Consensus 27 ~i~~Ge~~~iiG~sGsGKSTll~~i~gl~~p~~G~I~~~g 66 (242)
T d1oxxk2 27 NIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDD 66 (242)
T ss_dssp EECTTCEEEEECSCHHHHHHHHHHHHTSSCCSEEEEEETT
T ss_pred EECCCCEEEEECCCCCcHHHHHHHHHcCcCCCCceEEECC
Confidence 33444 789999999999999999999988877665544
No 62
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.53 E-value=2.6e-05 Score=68.29 Aligned_cols=28 Identities=25% Similarity=0.395 Sum_probs=25.8
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEE
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYD 274 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~ 274 (500)
++|.|||||||||+++.||..+|+..+.
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~~~~~i~ 30 (182)
T d1zina1 3 LVLMGLPGAGKGTQAEKIVAAYGIPHIS 30 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHCCCEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCceec
Confidence 7899999999999999999999988664
No 63
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.52 E-value=4.2e-05 Score=71.18 Aligned_cols=52 Identities=27% Similarity=0.298 Sum_probs=38.2
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeeccc----CChHHHHHHHHhhcCCe
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAV----KDNTELRKLLIETTSKS 297 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~----~~~~~l~~l~~~~~~~~ 297 (500)
-+.|.||+|||||||++.|++.+.+.-..|.+... .+...+++.+...++..
T Consensus 42 ~vaivG~sGsGKSTLl~li~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~ 97 (251)
T d1jj7a_ 42 VTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQEP 97 (251)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEGGGBCHHHHHHHEEEECSSC
T ss_pred EEEEECCCCCcHHHHHHHHhcccCCCcCEEEECCEecchhhhHHHHHHhhhccccc
Confidence 48899999999999999999999888766655543 13445666555555543
No 64
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.52 E-value=3.5e-05 Score=67.47 Aligned_cols=61 Identities=18% Similarity=0.147 Sum_probs=41.1
Q ss_pred cccceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecccCChHHHHHHHHh-hcCCeEEEecchh
Q 041423 243 WKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIE-TTSKSIIVIEDID 305 (500)
Q Consensus 243 ~~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~~~~~~l~~l~~~-~~~~~Il~iDdiD 305 (500)
.|.-++|.|+|||||||+++.++..++..+ ++...+.+...+.+.+.. ...+..+++|...
T Consensus 13 ~p~liil~G~pGsGKST~a~~l~~~~~~~~--i~~D~~~~~~~~~~~~~~~l~~g~~vIiD~t~ 74 (172)
T d1yj5a2 13 NPEVVVAVGFPGAGKSTFIQEHLVSAGYVH--VNRDTLGSWQRCVSSCQAALRQGKRVVIDNTN 74 (172)
T ss_dssp SCCEEEEECCTTSSHHHHHHHHTGGGTCEE--EEHHHHCSHHHHHHHHHHHHHTTCCEEEESCC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHhcCCEE--EchHHHHHHHHHHHHHHHHHHCCCCceeeCcC
Confidence 445689999999999999999998877654 455555555555444433 2445556667543
No 65
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=97.51 E-value=2.5e-05 Score=69.39 Aligned_cols=31 Identities=23% Similarity=0.361 Sum_probs=26.8
Q ss_pred ccceeeeCCCCCcHHHHHHHHHHHhCCCEEE
Q 041423 244 KRGYLLYGPPGTGKSTMIAAMANLLNYDVYD 274 (500)
Q Consensus 244 ~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~ 274 (500)
|.-++|.|||||||||+++.||.++|...+.
T Consensus 6 p~iI~i~G~pGSGKsT~a~~La~~~g~~~i~ 36 (194)
T d1qf9a_ 6 PNVVFVLGGPGSGKGTQCANIVRDFGWVHLS 36 (194)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHCCEEEE
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHCCceEc
Confidence 4468999999999999999999999976553
No 66
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=97.48 E-value=3.4e-05 Score=68.30 Aligned_cols=28 Identities=32% Similarity=0.477 Sum_probs=25.2
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEE
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYD 274 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~ 274 (500)
++|.|||||||||+++.||..+|+..+.
T Consensus 6 iil~G~pGSGKsT~a~~La~~~g~~~i~ 33 (190)
T d1ak2a1 6 AVLLGPPGAGKGTQAPKLAKNFCVCHLA 33 (190)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHTCEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCeEEe
Confidence 6788999999999999999999987654
No 67
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.46 E-value=3.5e-05 Score=67.57 Aligned_cols=29 Identities=38% Similarity=0.584 Sum_probs=26.1
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCCCEEE
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNYDVYD 274 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~~i~~ 274 (500)
.++|.|||||||||+++.||..+|+..+.
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~g~~~i~ 30 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKLGIPQIS 30 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceEc
Confidence 36889999999999999999999988764
No 68
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=97.46 E-value=2.3e-05 Score=69.39 Aligned_cols=29 Identities=17% Similarity=0.271 Sum_probs=26.2
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHhCCCEE
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLLNYDVY 273 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l~~~i~ 273 (500)
-.++|.|||||||||+++.||..++.+.+
T Consensus 4 m~I~i~GppGsGKsT~a~~La~~~~~~~i 32 (189)
T d1zaka1 4 LKVMISGAPASGKGTQCELIKTKYQLAHI 32 (189)
T ss_dssp CCEEEEESTTSSHHHHHHHHHHHHCCEEC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHCCcEE
Confidence 35889999999999999999999998865
No 69
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=97.42 E-value=4.3e-05 Score=67.13 Aligned_cols=28 Identities=25% Similarity=0.370 Sum_probs=25.7
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEE
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYD 274 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~ 274 (500)
++|.|||||||||+++.||..+++..+.
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~g~~~is 30 (182)
T d1s3ga1 3 IVLMGLPGAGKGTQADRIVEKYGTPHIS 30 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHCCCEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCceee
Confidence 6789999999999999999999988665
No 70
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.40 E-value=4e-05 Score=68.14 Aligned_cols=29 Identities=21% Similarity=0.359 Sum_probs=25.8
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCCCEEE
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNYDVYD 274 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~~i~~ 274 (500)
-++|.|||||||||+|+.||..+|...+.
T Consensus 10 iI~i~GppGSGKsT~a~~La~~~g~~~is 38 (196)
T d1ukza_ 10 VIFVLGGPGAGKGTQCEKLVKDYSFVHLS 38 (196)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSSCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCeEEe
Confidence 47888999999999999999999887654
No 71
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=97.39 E-value=2.8e-05 Score=71.91 Aligned_cols=34 Identities=26% Similarity=0.394 Sum_probs=29.7
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEEEeeccc
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAV 280 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~ 280 (500)
+.|.||+|+|||||+++|++.+.++-..+.+...
T Consensus 35 ~~liGpnGaGKSTl~~~i~Gl~~p~~G~I~~~G~ 68 (240)
T d1ji0a_ 35 VTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQ 68 (240)
T ss_dssp EEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTE
T ss_pred EEEECCCCCcHHHHHHHHhCCCCCCccEEEeccc
Confidence 7899999999999999999999988777766543
No 72
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=97.39 E-value=2.9e-05 Score=67.21 Aligned_cols=24 Identities=29% Similarity=0.362 Sum_probs=21.9
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCC
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNY 270 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~ 270 (500)
++|.|+|||||||++++||..|+.
T Consensus 9 I~l~G~~GsGKTTia~~La~~L~~ 32 (183)
T d1m8pa3 9 IFLTGYMNSGKDAIARALQVTLNQ 32 (183)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHhh
Confidence 678899999999999999998854
No 73
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.37 E-value=0.00015 Score=68.38 Aligned_cols=41 Identities=17% Similarity=0.298 Sum_probs=30.8
Q ss_pred HhhCCCcccc--eeeeCCCCCcHHHHHHHHHHHhCCCEEEEee
Q 041423 237 ARIGKAWKRG--YLLYGPPGTGKSTMIAAMANLLNYDVYDLEL 277 (500)
Q Consensus 237 ~~~g~~~~rg--~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l 277 (500)
+++.+..++| +.|.||+|+|||||+++|++.+.+.-..+..
T Consensus 53 ~~isl~i~~Ge~vaivG~nGsGKSTLl~~i~Gl~~p~~G~I~~ 95 (281)
T d1r0wa_ 53 KNINLNIEKGEMLAITGSTGSGKTSLLMLILGELEASEGIIKH 95 (281)
T ss_dssp EEEEEEECTTCEEEEEESTTSSHHHHHHHHHTSSCCSEEEEEC
T ss_pred eCeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCcCCCcEEEE
Confidence 3344444444 8899999999999999999998777555443
No 74
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=97.36 E-value=5e-05 Score=67.44 Aligned_cols=28 Identities=21% Similarity=0.462 Sum_probs=25.1
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEE
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYD 274 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~ 274 (500)
++|.||||+||||+++.||..+|+..++
T Consensus 9 IiliG~PGSGKtT~a~~La~~~g~~~is 36 (189)
T d2ak3a1 9 AAIMGAPGSGKGTVSSRITKHFELKHLS 36 (189)
T ss_dssp EEEECCTTSSHHHHHHHHHHHBCCEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCeEEc
Confidence 7788999999999999999999977653
No 75
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.35 E-value=1.3e-05 Score=70.71 Aligned_cols=27 Identities=30% Similarity=0.358 Sum_probs=23.5
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEE
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVY 273 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~ 273 (500)
++|.|+|||||||+|++||..++..++
T Consensus 22 I~L~G~pGSGKTTiAk~La~~l~~~~~ 48 (195)
T d1x6va3 22 VWLTGLSGAGKTTVSMALEEYLVCHGI 48 (195)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCC
Confidence 568899999999999999999876544
No 76
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=97.35 E-value=5e-05 Score=67.49 Aligned_cols=30 Identities=23% Similarity=0.434 Sum_probs=26.2
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHhCCCEEE
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLLNYDVYD 274 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l~~~i~~ 274 (500)
+-++|.|||||||||+++.||..+|.+.+.
T Consensus 9 ~iI~l~G~pGSGKsT~a~~La~~~g~~~is 38 (194)
T d3adka_ 9 KIIFVVGGPGSGKGTQCEKIVQKYGYTHLS 38 (194)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHTCCEEEE
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCeeEe
Confidence 458899999999999999999999876643
No 77
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.33 E-value=5.8e-05 Score=66.24 Aligned_cols=28 Identities=29% Similarity=0.530 Sum_probs=24.9
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEE
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYD 274 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~ 274 (500)
++|.|||||||||+++.||..+|...+.
T Consensus 5 Ivl~G~pGSGKtT~a~~La~~~g~~~i~ 32 (180)
T d1akya1 5 MVLIGPPGAGKGTQAPNLQERFHAAHLA 32 (180)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHCCEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCceEe
Confidence 6788999999999999999999877554
No 78
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=97.33 E-value=0.00043 Score=63.10 Aligned_cols=35 Identities=26% Similarity=0.361 Sum_probs=30.1
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeeccc
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAV 280 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~ 280 (500)
-+.|.||+|||||||++.|++...++-..+-+.+.
T Consensus 33 ~~~iiG~sGsGKSTLl~~i~gl~~p~sG~I~~~g~ 67 (230)
T d1l2ta_ 33 FVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNI 67 (230)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTE
T ss_pred EEEEECCCCCCcchhhHhccCCCCCCcceeEECCE
Confidence 37899999999999999999999988777766553
No 79
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=97.31 E-value=6e-05 Score=67.86 Aligned_cols=29 Identities=38% Similarity=0.633 Sum_probs=26.0
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCCCEEE
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNYDVYD 274 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~~i~~ 274 (500)
-+.+.|||||||||+++.||+.+|++.++
T Consensus 5 iI~I~GppGSGKgT~ak~La~~~gl~~iS 33 (225)
T d1ckea_ 5 VITIDGPSGAGKGTLCKAMAEALQWHLLD 33 (225)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcEEC
Confidence 57788999999999999999999988754
No 80
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.30 E-value=6.5e-05 Score=66.49 Aligned_cols=28 Identities=29% Similarity=0.468 Sum_probs=25.2
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCCCEE
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNYDVY 273 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~~i~ 273 (500)
-++|.||||+||||.|+.||..+|+..+
T Consensus 3 iI~i~GppGSGKsT~a~~La~~~g~~~i 30 (194)
T d1teva_ 3 VVFVLGGPGAGKGTQCARIVEKYGYTHL 30 (194)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHCCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCceE
Confidence 4789999999999999999999987654
No 81
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=97.30 E-value=6.4e-05 Score=65.74 Aligned_cols=28 Identities=21% Similarity=0.290 Sum_probs=25.4
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEE
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYD 274 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~ 274 (500)
++|.|||||||||+++.||..+++..+.
T Consensus 3 I~i~G~pGSGKsT~~~~La~~~~~~~i~ 30 (179)
T d1e4va1 3 IILLGAPVAGKGTQAQFIMEKYGIPQIS 30 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHCCCEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCceec
Confidence 6789999999999999999999987664
No 82
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=97.25 E-value=0.0011 Score=60.70 Aligned_cols=63 Identities=24% Similarity=0.372 Sum_probs=41.3
Q ss_pred ccceeeeCCCCCcHHHHHHHHHHHh-----CCCE-------------E-EEeecc-cC--------ChHHHHHHHHhhcC
Q 041423 244 KRGYLLYGPPGTGKSTMIAAMANLL-----NYDV-------------Y-DLELTA-VK--------DNTELRKLLIETTS 295 (500)
Q Consensus 244 ~rg~LL~GPpGtGKTsla~aiA~~l-----~~~i-------------~-~l~l~~-~~--------~~~~l~~l~~~~~~ 295 (500)
.+.++|.||+.+|||++++++|-.. |..+ + .+...+ +. .-.++..++..+..
T Consensus 41 ~~~~iiTGpN~~GKSt~lk~i~l~~~laq~G~~VpA~~a~~~~~d~I~~~~~~~d~~~~~~S~F~~E~~~~~~il~~~~~ 120 (234)
T d1wb9a2 41 RRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATE 120 (234)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCCEEEEEEC-----------CHHHHHHHHHHHHHCCT
T ss_pred ceEEEEeccCchhhHHHHHHHHHHHHHHHcCCeEecCceecccchhheeEEccCcccccchhHHHHHHHHHHHHHHhccc
Confidence 3578999999999999999988532 3221 1 111111 11 11345677788888
Q ss_pred CeEEEecchhc
Q 041423 296 KSIIVIEDIDC 306 (500)
Q Consensus 296 ~~Il~iDdiD~ 306 (500)
++++++||+-.
T Consensus 121 ~sLvliDE~~~ 131 (234)
T d1wb9a2 121 YSLVLMDEIGR 131 (234)
T ss_dssp TEEEEEESCCC
T ss_pred ccEEeeccccc
Confidence 99999999954
No 83
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=97.24 E-value=9.8e-05 Score=68.20 Aligned_cols=28 Identities=25% Similarity=0.361 Sum_probs=24.3
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCCCEE
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNYDVY 273 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~~i~ 273 (500)
-+.|.||+|+|||||++.|++.+.+.-.
T Consensus 30 ~vaivG~sGsGKSTLl~ll~gl~~p~~G 57 (242)
T d1mv5a_ 30 IIAFAGPSGGGKSTIFSLLERFYQPTAG 57 (242)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSSCCSBS
T ss_pred EEEEECCCCCCHHHHHHHHHHhhCCCCC
Confidence 4889999999999999999998876533
No 84
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=97.23 E-value=0.0011 Score=60.15 Aligned_cols=39 Identities=18% Similarity=0.169 Sum_probs=30.3
Q ss_pred CCCcccceeeeCCCCCcHHHHHHHHHHHh---CCCEEEEeec
Q 041423 240 GKAWKRGYLLYGPPGTGKSTMIAAMANLL---NYDVYDLELT 278 (500)
Q Consensus 240 g~~~~rg~LL~GPpGtGKTsla~aiA~~l---~~~i~~l~l~ 278 (500)
|++.+.-++++||||||||+++..+|... +.++..+++.
T Consensus 22 Gi~~gsl~li~G~pGsGKT~l~~qia~~~~~~~~~~~~is~e 63 (242)
T d1tf7a2 22 GFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYE 63 (242)
T ss_dssp SEESSCEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCcCCeEEEEEeCCCCCHHHHHHHHHHHHHHhccccceeecc
Confidence 56666678999999999999999988875 4555555543
No 85
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=97.20 E-value=7.5e-05 Score=63.04 Aligned_cols=24 Identities=33% Similarity=0.365 Sum_probs=20.4
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHh
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l 268 (500)
+-++|+||||+||||+|+.++...
T Consensus 3 klIii~G~pGsGKTTla~~L~~~~ 26 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIAKN 26 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHhC
Confidence 347899999999999999987654
No 86
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=97.16 E-value=0.00011 Score=66.37 Aligned_cols=28 Identities=29% Similarity=0.494 Sum_probs=24.7
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEE
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYD 274 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~ 274 (500)
+.+-|||||||||+|+.||.++|++.++
T Consensus 6 IaIdGp~GsGKgT~ak~La~~lg~~~is 33 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKIIAKDFGFTYLD 33 (223)
T ss_dssp EEEECSSCSSHHHHHHHHHHHHCCEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCcEEC
Confidence 4466999999999999999999998664
No 87
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=97.13 E-value=0.00093 Score=59.85 Aligned_cols=35 Identities=23% Similarity=0.245 Sum_probs=28.3
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHh---CCCEEEEeeccc
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLL---NYDVYDLELTAV 280 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l---~~~i~~l~l~~~ 280 (500)
-++|.||+|+||||++.-||.++ +..+..+++...
T Consensus 12 vi~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit~Dt~ 49 (207)
T d1ls1a2 12 LWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQ 49 (207)
T ss_dssp EEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccc
Confidence 37889999999999999998876 666777766654
No 88
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=97.11 E-value=0.00078 Score=60.36 Aligned_cols=37 Identities=27% Similarity=0.267 Sum_probs=28.7
Q ss_pred ccceeeeCCCCCcHHHHHHHHHHHh---CCCEEEEeeccc
Q 041423 244 KRGYLLYGPPGTGKSTMIAAMANLL---NYDVYDLELTAV 280 (500)
Q Consensus 244 ~rg~LL~GPpGtGKTsla~aiA~~l---~~~i~~l~l~~~ 280 (500)
++-++|+||+|+||||++.-||.++ |..+..+.+...
T Consensus 6 ~~vi~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~Dt~ 45 (207)
T d1okkd2 6 GRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTF 45 (207)
T ss_dssp SSEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCCCS
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEeccc
Confidence 3457899999999999999888876 556666666554
No 89
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=97.06 E-value=0.00081 Score=62.60 Aligned_cols=39 Identities=21% Similarity=0.290 Sum_probs=28.3
Q ss_pred CCCcccceeeeCCCCCcHHHHHHHHHHHh---CCCEEEEeec
Q 041423 240 GKAWKRGYLLYGPPGTGKSTMIAAMANLL---NYDVYDLELT 278 (500)
Q Consensus 240 g~~~~rg~LL~GPpGtGKTsla~aiA~~l---~~~i~~l~l~ 278 (500)
|++..+-..|+||||||||+++-.+|... +..++.++..
T Consensus 50 Gi~~g~itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyidtE 91 (263)
T d1u94a1 50 GLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAE 91 (263)
T ss_dssp SEETTSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CccCceEEEEecCCCcHHHHHHHHHHHHHHcCCCEEEEEccc
Confidence 55665668999999999999998776644 4455555544
No 90
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=97.04 E-value=8.9e-05 Score=69.12 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=27.4
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEEEeec
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYDLELT 278 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~ 278 (500)
+.|.||+|||||||+++|++.+.++-..+-+.
T Consensus 31 ~~iiG~sGsGKSTLl~~i~Gl~~p~~G~I~~~ 62 (258)
T d1b0ua_ 31 ISIIGSSGSGKSTFLRCINFLEKPSEGAIIVN 62 (258)
T ss_dssp EEEECCTTSSHHHHHHHHTTSSCCSEEEEEET
T ss_pred EEEECCCCCcHHHHHHHHHcCccCCCCCEEEC
Confidence 78999999999999999999888776665443
No 91
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=97.01 E-value=0.00014 Score=62.94 Aligned_cols=27 Identities=22% Similarity=0.345 Sum_probs=23.4
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHhCCC
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLLNYD 271 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l~~~ 271 (500)
+-++|.|||||||||+++.|+..|+..
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~~~ 28 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLRKE 28 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHc
Confidence 357899999999999999999988543
No 92
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=96.98 E-value=0.00017 Score=61.72 Aligned_cols=33 Identities=21% Similarity=0.163 Sum_probs=26.2
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHh---CCCEEEEeec
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLL---NYDVYDLELT 278 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l---~~~i~~l~l~ 278 (500)
-+.+.|+||||||||++.|++++ |..+..+...
T Consensus 4 vi~itG~~GSGKTTL~~~L~~~l~~~g~~v~v~~~d 39 (170)
T d1np6a_ 4 LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHT 39 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEeccc
Confidence 47899999999999999999986 5555555433
No 93
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=96.97 E-value=0.0018 Score=60.27 Aligned_cols=40 Identities=23% Similarity=0.258 Sum_probs=29.4
Q ss_pred CCCcccceeeeCCCCCcHHHHHHHHHHHh---CCCEEEEeecc
Q 041423 240 GKAWKRGYLLYGPPGTGKSTMIAAMANLL---NYDVYDLELTA 279 (500)
Q Consensus 240 g~~~~rg~LL~GPpGtGKTsla~aiA~~l---~~~i~~l~l~~ 279 (500)
|+|..+-..++||||||||+++..++... +..++.++...
T Consensus 53 Gip~g~itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDtE~ 95 (268)
T d1xp8a1 53 GIPRGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEH 95 (268)
T ss_dssp SEETTSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CccCceEEEEecCCccchHHHHHHHHHHHHhCCCEEEEEECCc
Confidence 45555668899999999999998777644 55566665543
No 94
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=96.95 E-value=0.00079 Score=61.43 Aligned_cols=22 Identities=50% Similarity=0.788 Sum_probs=20.2
Q ss_pred eeeeCCCCCcHHHHHHHHHHHh
Q 041423 247 YLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l 268 (500)
+.|.||+|+|||||+++|++..
T Consensus 28 ~~iiG~nGaGKSTLl~~l~Gl~ 49 (231)
T d1l7vc_ 28 LHLVGPNGAGKSTLLARMAGMT 49 (231)
T ss_dssp EECBCCTTSSHHHHHHHHHTSC
T ss_pred EEEECCCCCcHHHHHHHHhCCC
Confidence 7899999999999999999954
No 95
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.95 E-value=0.00015 Score=64.50 Aligned_cols=25 Identities=24% Similarity=0.487 Sum_probs=22.2
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCC
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNY 270 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~ 270 (500)
-++++|+||+||||++++||.+++.
T Consensus 4 li~l~GlpgsGKSTla~~L~~~l~~ 28 (213)
T d1bifa1 4 LIVMVGLPARGKTYISKKLTRYLNF 28 (213)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHh
Confidence 4789999999999999999998753
No 96
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=96.93 E-value=0.001 Score=59.80 Aligned_cols=37 Identities=24% Similarity=0.282 Sum_probs=24.2
Q ss_pred ccceeeeCCCCCcHHHHHHHHHHHh---CCCEEEEeeccc
Q 041423 244 KRGYLLYGPPGTGKSTMIAAMANLL---NYDVYDLELTAV 280 (500)
Q Consensus 244 ~rg~LL~GPpGtGKTsla~aiA~~l---~~~i~~l~l~~~ 280 (500)
|.-++|.||+|+||||++.-||..+ +..+..+.+...
T Consensus 12 p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~ 51 (211)
T d1j8yf2 12 PYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVY 51 (211)
T ss_dssp SEEEEEECSCCC----HHHHHHHHHHHTTCCEEEEECCCS
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEeecc
Confidence 3457889999999999998888766 556666666544
No 97
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=96.92 E-value=0.0011 Score=59.55 Aligned_cols=37 Identities=24% Similarity=0.224 Sum_probs=29.0
Q ss_pred ccceeeeCCCCCcHHHHHHHHHHHh---CCCEEEEeeccc
Q 041423 244 KRGYLLYGPPGTGKSTMIAAMANLL---NYDVYDLELTAV 280 (500)
Q Consensus 244 ~rg~LL~GPpGtGKTsla~aiA~~l---~~~i~~l~l~~~ 280 (500)
|.-++|.||+|+||||++.-||..+ +..+..+.+...
T Consensus 9 p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~ 48 (211)
T d2qy9a2 9 PFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTF 48 (211)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCTT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccc
Confidence 3458899999999999999999766 556766666554
No 98
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=96.87 E-value=0.0025 Score=54.26 Aligned_cols=89 Identities=19% Similarity=0.193 Sum_probs=53.8
Q ss_pred cCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHHHHHHHHhCCC--------------------E
Q 041423 213 ALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYD--------------------V 272 (500)
Q Consensus 213 ~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla~aiA~~l~~~--------------------i 272 (500)
.-+++...++-+.+...+.. ....++.-++|.|+=|+|||++++++++.++.+ +
T Consensus 8 l~~e~~t~~lg~~la~~l~~------~~~~~g~ii~L~G~LGaGKTtfvr~~~~~lg~~~~V~SPTF~l~~~Y~~~~~~i 81 (158)
T d1htwa_ 8 IPDEFSMLRFGKKFAEILLK------LHTEKAIMVYLNGDLGAGKTTLTRGMLQGIGHQGNVKSPTYTLVEEYNIAGKMI 81 (158)
T ss_dssp ECSHHHHHHHHHHHHHHHHH------HCCSSCEEEEEECSTTSSHHHHHHHHHHHTTCCSCCCCCTTTCEEEEEETTEEE
T ss_pred CCCHHHHHHHHHHHHHHHHh------ccCCCCeEEEEecCCCccHHHHHHHHHhhcccccccCCCceEEEEeeccCCceE
Confidence 33455555555555544421 111222237899999999999999999988653 3
Q ss_pred EEEeecccCChHHHHHH-H-HhhcCCeEEEecchhch
Q 041423 273 YDLELTAVKDNTELRKL-L-IETTSKSIIVIEDIDCS 307 (500)
Q Consensus 273 ~~l~l~~~~~~~~l~~l-~-~~~~~~~Il~iDdiD~~ 307 (500)
+-+|+--+.+..++..+ + ......+|++||=-+.+
T Consensus 82 ~H~DlYRl~~~~El~~lg~~e~~~~~~i~~IEWpe~~ 118 (158)
T d1htwa_ 82 YHFDLYRLADPEELEFMGIRDYFNTDSICLIEWSEKG 118 (158)
T ss_dssp EEEECTTCSCTTHHHHSTHHHHHSSSCEEEEESGGGG
T ss_pred EEEEEeccCChhhhhhCCchhHhccCCEEEEECchhh
Confidence 34455555666665443 2 22345678888765543
No 99
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=96.84 E-value=0.0028 Score=56.58 Aligned_cols=38 Identities=21% Similarity=0.226 Sum_probs=27.4
Q ss_pred CCCcccceeeeCCCCCcHHHHHHHHHHH----hCCCEEEEee
Q 041423 240 GKAWKRGYLLYGPPGTGKSTMIAAMANL----LNYDVYDLEL 277 (500)
Q Consensus 240 g~~~~rg~LL~GPpGtGKTsla~aiA~~----l~~~i~~l~l 277 (500)
|++++.-++|+||||+|||+++..+|.. -+..++.++.
T Consensus 22 Gi~~G~~~~I~G~~G~GKT~la~~~~~~~~~~~~~~~~~~s~ 63 (242)
T d1tf7a1 22 GLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTF 63 (242)
T ss_dssp SEETTSEEEEEESTTSSHHHHHHHHHHHHHHHHCCCEEEEES
T ss_pred CCcCCeEEEEEeCCCCCHHHHHHHHHHHHHHhcCCCcccccc
Confidence 5666667899999999999999765532 2445555544
No 100
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.80 E-value=0.0024 Score=59.42 Aligned_cols=40 Identities=20% Similarity=0.202 Sum_probs=29.1
Q ss_pred CCCcccceeeeCCCCCcHHHHHHHHHHH---hCCCEEEEeecc
Q 041423 240 GKAWKRGYLLYGPPGTGKSTMIAAMANL---LNYDVYDLELTA 279 (500)
Q Consensus 240 g~~~~rg~LL~GPpGtGKTsla~aiA~~---l~~~i~~l~l~~ 279 (500)
|++..+-..|+||||||||+++..++.. .+..++.++...
T Consensus 56 G~~~g~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~ 98 (269)
T d1mo6a1 56 GLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEH 98 (269)
T ss_dssp SBCSSSEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcccceeEEEecCCCcHHHHHHHHHHHHHhcCCCEEEEEECCc
Confidence 6777777899999999999998655543 355555565444
No 101
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=96.79 E-value=0.0015 Score=59.25 Aligned_cols=61 Identities=26% Similarity=0.370 Sum_probs=40.2
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHh-----CCCE----EEEe--------ecc---cC--------ChHHHHHHHHhhcCCe
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLL-----NYDV----YDLE--------LTA---VK--------DNTELRKLLIETTSKS 297 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l-----~~~i----~~l~--------l~~---~~--------~~~~l~~l~~~~~~~~ 297 (500)
.++|.||+.+|||+++++++-.. |..+ ..+. +.. +. .-.++..++.....++
T Consensus 37 ~~iiTGpN~~GKSt~lk~i~l~~ilAq~G~~vpA~~~~i~~~d~I~~~~~~~d~~~~~~StF~~el~~~~~il~~~~~~s 116 (224)
T d1ewqa2 37 LVLITGPNMAGKSTFLRQTALIALLAQVGSFVPAEEAHLPLFDGIYTRIGASDDLAGGKSTFMVEMEEVALILKEATENS 116 (224)
T ss_dssp EEEEESCSSSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCSEEEEECCC------CCSHHHHHHHHHHHHHHHCCTTE
T ss_pred EEEEECCCccccchhhhhhHHHHHHHhccceeecCceEEeecceEEEEECCCccccCCccHHHHhHHHHHHHhccCCCCc
Confidence 58999999999999999887532 3221 1111 110 11 1134567777778899
Q ss_pred EEEecchhc
Q 041423 298 IIVIEDIDC 306 (500)
Q Consensus 298 Il~iDdiD~ 306 (500)
+++|||+-.
T Consensus 117 LvliDE~~~ 125 (224)
T d1ewqa2 117 LVLLDEVGR 125 (224)
T ss_dssp EEEEESTTT
T ss_pred EEeeccccc
Confidence 999999954
No 102
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=96.70 E-value=0.0008 Score=61.28 Aligned_cols=29 Identities=21% Similarity=0.354 Sum_probs=24.5
Q ss_pred CCCcccceeeeCCCCCcHHHHHHHHHHHh
Q 041423 240 GKAWKRGYLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 240 g~~~~rg~LL~GPpGtGKTsla~aiA~~l 268 (500)
|+|..+-++|+||||||||+++-.+|...
T Consensus 32 Glp~G~~~li~G~pGsGKT~~~lq~~~~~ 60 (254)
T d1pzna2 32 GIETQAITEVFGEFGSGKTQLAHTLAVMV 60 (254)
T ss_dssp SEESSEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CccCCEEEEEEcCCCCCHHHHHHHHHHHh
Confidence 56666679999999999999999887654
No 103
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.69 E-value=0.00042 Score=62.71 Aligned_cols=28 Identities=29% Similarity=0.228 Sum_probs=24.2
Q ss_pred CCCcccceeeeCCCCCcHHHHHHHHHHH
Q 041423 240 GKAWKRGYLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 240 g~~~~rg~LL~GPpGtGKTsla~aiA~~ 267 (500)
|++..+-++|+||||||||+++..+|..
T Consensus 30 Gi~~G~~~li~G~pGsGKT~l~lq~~~~ 57 (251)
T d1szpa2 30 GVETGSITELFGEFRTGKSQLCHTLAVT 57 (251)
T ss_dssp SEESSSEEEEEESTTSSHHHHHHHHTTT
T ss_pred CCcCCeEEEEEcCCCCCHHHHHHHHHHH
Confidence 6777777999999999999999887754
No 104
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.69 E-value=0.00035 Score=61.66 Aligned_cols=29 Identities=21% Similarity=0.173 Sum_probs=25.0
Q ss_pred CCCcccceeeeCCCCCcHHHHHHHHHHHh
Q 041423 240 GKAWKRGYLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 240 g~~~~rg~LL~GPpGtGKTsla~aiA~~l 268 (500)
|+++.+-++|+||||+|||+++..+|...
T Consensus 19 Gi~~G~v~~i~G~~GsGKT~l~l~la~~~ 47 (242)
T d1n0wa_ 19 GIETGSITEMFGEFRTGKTQICHTLAVTC 47 (242)
T ss_dssp SEETTSEEEEECCTTSSHHHHHHHHHHHT
T ss_pred CCcCCEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 56666679999999999999999988764
No 105
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=96.62 E-value=0.00037 Score=60.50 Aligned_cols=25 Identities=36% Similarity=0.646 Sum_probs=22.4
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCC
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYD 271 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~ 271 (500)
++|.|+||+||||+++.||..|+..
T Consensus 4 ivi~G~~GsGKTT~~~~La~~L~~~ 28 (194)
T d1nksa_ 4 GIVTGIPGVGKSTVLAKVKEILDNQ 28 (194)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHc
Confidence 6789999999999999999998654
No 106
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=96.58 E-value=0.006 Score=56.16 Aligned_cols=27 Identities=26% Similarity=0.265 Sum_probs=21.5
Q ss_pred CcccceeeeCCCCCcHHHHHHHHHHHh
Q 041423 242 AWKRGYLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 242 ~~~rg~LL~GPpGtGKTsla~aiA~~l 268 (500)
.+..-.+|+|+||+|||+|+..+|..+
T Consensus 27 ~pg~~~~i~G~~G~GKS~l~l~la~~i 53 (274)
T d1nlfa_ 27 VAGTVGALVSPGGAGKSMLALQLAAQI 53 (274)
T ss_dssp ETTSEEEEEESTTSSHHHHHHHHHHHH
T ss_pred cCCcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 334447899999999999998888653
No 107
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.49 E-value=0.00067 Score=61.76 Aligned_cols=29 Identities=17% Similarity=0.099 Sum_probs=25.2
Q ss_pred CCCcccceeeeCCCCCcHHHHHHHHHHHh
Q 041423 240 GKAWKRGYLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 240 g~~~~rg~LL~GPpGtGKTsla~aiA~~l 268 (500)
|+|..+-++|+||||||||+++..+|...
T Consensus 33 Gip~G~~~~i~G~~GsGKT~lalq~~~~~ 61 (258)
T d1v5wa_ 33 GIESMAITEAFGEFRTGKTQLSHTLCVTA 61 (258)
T ss_dssp SBCSSEEEEEECCTTCTHHHHHHHHHHHT
T ss_pred CCcCCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 67777779999999999999999998643
No 108
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.48 E-value=0.0008 Score=59.03 Aligned_cols=28 Identities=32% Similarity=0.506 Sum_probs=24.3
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHhCCCE
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLLNYDV 272 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l~~~i 272 (500)
|.++|.||+|+|||||++.|+..+...+
T Consensus 2 rpIvl~GpsG~GK~tl~~~L~~~~~~~~ 29 (186)
T d1gkya_ 2 RPIVISGPSGTGKSTLLKKLFAEYPDSF 29 (186)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHCTTTE
T ss_pred CeEEEECCCCCCHHHHHHHHHHhCCcce
Confidence 4589999999999999999999876544
No 109
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.46 E-value=0.0035 Score=53.54 Aligned_cols=20 Identities=25% Similarity=0.549 Sum_probs=18.7
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
+++.|++|+|||||+..+.+
T Consensus 9 i~vvG~~~vGKTsLi~~l~~ 28 (170)
T d1r2qa_ 9 LVLLGESAVGKSSLVLRFVK 28 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999999986
No 110
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=96.44 E-value=0.00069 Score=60.44 Aligned_cols=33 Identities=21% Similarity=0.350 Sum_probs=28.5
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecc
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYDLELTA 279 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~ 279 (500)
+.|.||+|+|||||+++|++.+.+.-..+.+..
T Consensus 30 ~~l~G~NGsGKSTLl~~i~gl~~p~~G~I~~~g 62 (200)
T d1sgwa_ 30 VNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNG 62 (200)
T ss_dssp EEEECCTTSSHHHHHHHHTTSSCCSEEEEEETT
T ss_pred EEEECCCCChHHHHHHHHhcccccCCCEEEECC
Confidence 789999999999999999999988776665543
No 111
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.42 E-value=0.001 Score=59.58 Aligned_cols=32 Identities=28% Similarity=0.405 Sum_probs=25.1
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHh----CCCEEEEee
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLL----NYDVYDLEL 277 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l----~~~i~~l~l 277 (500)
-+.|.|.||+||||++++|+..+ +.+++.++.
T Consensus 26 vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~ldg 61 (208)
T d1m7ga_ 26 TIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDG 61 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhcCceEEEEcc
Confidence 37899999999999999999765 455555443
No 112
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.42 E-value=0.0011 Score=58.46 Aligned_cols=27 Identities=30% Similarity=0.422 Sum_probs=23.8
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCCCE
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNYDV 272 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~~i 272 (500)
.++|.||+|+||||+++.++..++..+
T Consensus 2 pIvl~GPsGsGK~tl~~~L~~~~~~~~ 28 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLLKKLFQEHSSIF 28 (190)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHHTTTE
T ss_pred eEEEECCCCCCHHHHHHHHHHhCCCce
Confidence 488999999999999999999886554
No 113
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.38 E-value=0.0037 Score=53.40 Aligned_cols=21 Identities=24% Similarity=0.423 Sum_probs=19.2
Q ss_pred eeeeCCCCCcHHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~ 267 (500)
+++.|++|+|||||+..+.+.
T Consensus 8 i~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 8 ILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHcC
Confidence 789999999999999999863
No 114
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=96.37 E-value=0.0028 Score=52.96 Aligned_cols=21 Identities=24% Similarity=0.338 Sum_probs=19.1
Q ss_pred eeeeCCCCCcHHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~ 267 (500)
++|.|+||+|||||+..+++.
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~ 23 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLG 23 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 689999999999999999863
No 115
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.34 E-value=0.00063 Score=59.38 Aligned_cols=24 Identities=21% Similarity=0.293 Sum_probs=21.3
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCC
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNY 270 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~ 270 (500)
+.+.||+||||||+|+.|+..++.
T Consensus 25 IgI~G~~GSGKSTla~~L~~~l~~ 48 (198)
T d1rz3a_ 25 LGIDGLSRSGKTTLANQLSQTLRE 48 (198)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhcc
Confidence 568999999999999999987754
No 116
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.34 E-value=0.0051 Score=52.22 Aligned_cols=20 Identities=30% Similarity=0.700 Sum_probs=18.7
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|+||+|||||+..+.+
T Consensus 7 ivlvG~~~vGKTsli~~~~~ 26 (166)
T d1z0fa1 7 YIIIGDMGVGKSCLLHQFTE 26 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999999886
No 117
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.32 E-value=0.002 Score=55.45 Aligned_cols=21 Identities=29% Similarity=0.687 Sum_probs=18.9
Q ss_pred eeeeCCCCCcHHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~ 267 (500)
+++.|+||+|||||+..+.+.
T Consensus 6 ivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 6 YIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 789999999999999998763
No 118
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=96.27 E-value=0.002 Score=57.85 Aligned_cols=36 Identities=22% Similarity=0.251 Sum_probs=28.2
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHh---CCCEEEEeeccc
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLL---NYDVYDLELTAV 280 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l---~~~i~~l~l~~~ 280 (500)
.-++|.||+|+||||++.-||..+ +..+..+.+...
T Consensus 12 ~vi~lvGptGvGKTTTiAKLAa~~~~~~~kV~lit~Dt~ 50 (213)
T d1vmaa2 12 FVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTF 50 (213)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEeeccc
Confidence 347899999999999999888766 566666666554
No 119
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=96.27 E-value=0.0036 Score=53.45 Aligned_cols=22 Identities=18% Similarity=0.321 Sum_probs=19.9
Q ss_pred ceeeeCCCCCcHHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~ 267 (500)
-++|.|.||+|||||+.++.+.
T Consensus 17 kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 17 KVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp EEEEEESTTSSHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 4899999999999999998863
No 120
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.22 E-value=0.0018 Score=55.33 Aligned_cols=33 Identities=15% Similarity=0.228 Sum_probs=26.3
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHh---CCCEEEEeec
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLL---NYDVYDLELT 278 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l---~~~i~~l~l~ 278 (500)
-+.+.|++|||||||+..++.+| |..+..+...
T Consensus 3 ii~I~G~~gSGKTTli~~l~~~L~~~g~~v~vik~d 38 (165)
T d1xjca_ 3 VWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHH 38 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEEEec
Confidence 35689999999999999999987 5566666433
No 121
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.11 E-value=0.0044 Score=52.92 Aligned_cols=20 Identities=25% Similarity=0.590 Sum_probs=18.9
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|++|+|||||++.+.+
T Consensus 8 i~lvG~~~vGKTsLi~~l~~ 27 (171)
T d2ew1a1 8 IVLIGNAGVGKTCLVRRFTQ 27 (171)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999999987
No 122
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=96.07 E-value=0.0052 Score=58.69 Aligned_cols=28 Identities=21% Similarity=0.521 Sum_probs=24.6
Q ss_pred ccceeeeCCCCCcHHHHHHHHHHHhCCC
Q 041423 244 KRGYLLYGPPGTGKSTMIAAMANLLNYD 271 (500)
Q Consensus 244 ~rg~LL~GPpGtGKTsla~aiA~~l~~~ 271 (500)
++++|+.||+|+||||+++|++++....
T Consensus 166 ~~nili~G~tgSGKTT~l~al~~~i~~~ 193 (323)
T d1g6oa_ 166 GKNVIVCGGTGSGKTTYIKSIMEFIPKE 193 (323)
T ss_dssp TCCEEEEESTTSSHHHHHHHHGGGSCTT
T ss_pred CCCEEEEeeccccchHHHHHHhhhcccc
Confidence 4589999999999999999999987543
No 123
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.06 E-value=0.0057 Score=51.69 Aligned_cols=20 Identities=20% Similarity=0.488 Sum_probs=18.6
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
+++.|.+|+|||+|+..+.+
T Consensus 3 v~vvG~~~vGKTsLi~r~~~ 22 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLITRFMY 22 (164)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 68999999999999999886
No 124
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.06 E-value=0.015 Score=50.71 Aligned_cols=24 Identities=17% Similarity=0.519 Sum_probs=21.2
Q ss_pred ccceeeeCCCCCcHHHHHHHHHHH
Q 041423 244 KRGYLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 244 ~rg~LL~GPpGtGKTsla~aiA~~ 267 (500)
...++|.|+||+|||||+.++.+.
T Consensus 3 ~p~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 3 QPSIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHS
T ss_pred CCEEEEECCCCCCHHHHHHHHhCC
Confidence 347899999999999999999874
No 125
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.01 E-value=0.0077 Score=51.12 Aligned_cols=20 Identities=30% Similarity=0.516 Sum_probs=18.7
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|.+|+|||||+..+.+
T Consensus 7 i~lvG~~~vGKTsli~rl~~ 26 (167)
T d1z0ja1 7 VCLLGDTGVGKSSIMWRFVE 26 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999999886
No 126
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.99 E-value=0.0055 Score=52.41 Aligned_cols=20 Identities=35% Similarity=0.718 Sum_probs=18.6
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|.||+|||||+..+.+
T Consensus 8 I~lvG~~~vGKTsll~~~~~ 27 (174)
T d2bmea1 8 FLVIGNAGTGKSCLLHQFIE 27 (174)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999999875
No 127
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=95.97 E-value=0.0063 Score=59.91 Aligned_cols=85 Identities=19% Similarity=0.303 Sum_probs=52.8
Q ss_pred CccccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccc-eeeeCCCCCcHHHHHHHHHHHhC---CCEEEEeec----
Q 041423 207 ATFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRG-YLLYGPPGTGKSTMIAAMANLLN---YDVYDLELT---- 278 (500)
Q Consensus 207 ~~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg-~LL~GPpGtGKTsla~aiA~~l~---~~i~~l~l~---- 278 (500)
.++++|..++...+.+.+. +. .++| +|+.||.|+||||++.++.++++ .+++.+.=.
T Consensus 135 ~~l~~LG~~~~~~~~l~~l----~~-----------~~~GliLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEdPiE~~ 199 (401)
T d1p9ra_ 135 LDLHSLGMTAHNHDNFRRL----IK-----------RPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFD 199 (401)
T ss_dssp CCGGGSCCCHHHHHHHHHH----HT-----------SSSEEEEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESSCCSC
T ss_pred hhhhhhcccHHHHHHHHHH----Hh-----------hhhceEEEEcCCCCCccHHHHHHhhhhcCCCceEEEeccCcccc
Confidence 4688998888776665332 22 2345 78889999999999999999874 346655211
Q ss_pred --cc-------CChHHHHHHHHhh--cCCeEEEecchhc
Q 041423 279 --AV-------KDNTELRKLLIET--TSKSIIVIEDIDC 306 (500)
Q Consensus 279 --~~-------~~~~~l~~l~~~~--~~~~Il~iDdiD~ 306 (500)
.. .........+..+ ..|-||++.||-.
T Consensus 200 ~~~~~q~~v~~~~~~~~~~~l~~~lR~dPDvi~igEiRd 238 (401)
T d1p9ra_ 200 IDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRD 238 (401)
T ss_dssp CSSSEEEECBGGGTBCHHHHHHHHGGGCCSEEEESCCCS
T ss_pred cCCCCeeeecCCcCCCHHHHHHHHHhhcCCEEEecCcCC
Confidence 00 0111122222222 3688999999854
No 128
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.96 E-value=0.0017 Score=56.46 Aligned_cols=25 Identities=32% Similarity=0.550 Sum_probs=21.9
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHhC
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLLN 269 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l~ 269 (500)
+-++|.||||+||||+++.|+..+.
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHST
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCC
Confidence 3478999999999999999998874
No 129
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=95.95 E-value=0.0057 Score=50.12 Aligned_cols=34 Identities=32% Similarity=0.378 Sum_probs=26.4
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeec
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELT 278 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~ 278 (500)
+..+|.+|.|+|||+++-.++...+..++.+-..
T Consensus 9 ~~~ll~apTGsGKT~~~~~~~~~~~~~vli~~P~ 42 (136)
T d1a1va1 9 QVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNPS 42 (136)
T ss_dssp EEEEEECCTTSCTTTHHHHHHHTTTCCEEEEESC
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHcCCcEEEEcCh
Confidence 3578999999999998877777777776665443
No 130
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=95.91 E-value=0.003 Score=53.56 Aligned_cols=21 Identities=24% Similarity=0.483 Sum_probs=19.1
Q ss_pred ceeeeCCCCCcHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~ 266 (500)
-+++.|+||+|||||+..+.+
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~ 24 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNG 24 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHcC
Confidence 378999999999999999876
No 131
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.82 E-value=0.0021 Score=57.21 Aligned_cols=25 Identities=28% Similarity=0.402 Sum_probs=22.3
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCC
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYD 271 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~ 271 (500)
+.+.||+||||||+++.|+..++..
T Consensus 5 IgI~G~~gSGKSTla~~L~~~l~~~ 29 (213)
T d1uj2a_ 5 IGVSGGTASGKSSVCAKIVQLLGQN 29 (213)
T ss_dssp EEEECSTTSSHHHHHHHHHHHTTGG
T ss_pred EEEECCCCCCHHHHHHHHHHHhchh
Confidence 5688999999999999999998754
No 132
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=95.77 E-value=0.0017 Score=58.45 Aligned_cols=29 Identities=21% Similarity=0.193 Sum_probs=24.5
Q ss_pred CCCcccceeeeCCCCCcHHHHHHHHHHHh
Q 041423 240 GKAWKRGYLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 240 g~~~~rg~LL~GPpGtGKTsla~aiA~~l 268 (500)
|++...-++|+||||+|||+++..+|..+
T Consensus 30 Gl~~G~l~~i~G~~G~GKT~~~l~~a~~~ 58 (258)
T d2i1qa2 30 GLESQSVTEFAGVFGSGKTQIMHQSCVNL 58 (258)
T ss_dssp SEETTEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CccCCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 46666668999999999999999998755
No 133
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.73 E-value=0.0074 Score=56.44 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=27.2
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHh------CCCEEEEeeccc
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLL------NYDVYDLELTAV 280 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l------~~~i~~l~l~~~ 280 (500)
-+.|.||+|||||||+..|...| +..+..+++.+.
T Consensus 29 iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~Ddf 69 (286)
T d1odfa_ 29 FIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDF 69 (286)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGG
T ss_pred EEEeECCCCCCHHHHHHHHHHHHHHHhCCCcceEeeccCCC
Confidence 35588999999999999887765 445777777765
No 134
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.69 E-value=0.0038 Score=55.72 Aligned_cols=32 Identities=34% Similarity=0.325 Sum_probs=25.2
Q ss_pred ccee--eeCCCCCcHHHHHHHHHHHh---CCCEEEEe
Q 041423 245 RGYL--LYGPPGTGKSTMIAAMANLL---NYDVYDLE 276 (500)
Q Consensus 245 rg~L--L~GPpGtGKTsla~aiA~~l---~~~i~~l~ 276 (500)
||.| |.||.|+||||+++.|+..| |.++..+.
T Consensus 2 rG~lI~ieG~dGsGKsT~~~~L~~~L~~~g~~v~~~~ 38 (209)
T d1nn5a_ 2 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLR 38 (209)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CeeEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEe
Confidence 5644 55999999999999999977 56666554
No 135
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=95.67 E-value=0.017 Score=49.00 Aligned_cols=21 Identities=24% Similarity=0.433 Sum_probs=19.0
Q ss_pred ceeeeCCCCCcHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~ 266 (500)
-++|.|.+|+|||||+..+.+
T Consensus 6 KivlvG~~~vGKTsli~~~~~ 26 (168)
T d1u8za_ 6 KVIMVGSGGVGKSALTLQFMY 26 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 378999999999999999876
No 136
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.67 E-value=0.021 Score=48.21 Aligned_cols=21 Identities=24% Similarity=0.430 Sum_probs=19.2
Q ss_pred eeeeCCCCCcHHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~ 267 (500)
++|.|++|+|||||+..+.+.
T Consensus 6 i~lvG~~~vGKTsLi~r~~~~ 26 (167)
T d1kaoa_ 6 VVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999999873
No 137
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.52 E-value=0.022 Score=48.02 Aligned_cols=21 Identities=24% Similarity=0.444 Sum_probs=19.2
Q ss_pred eeeeCCCCCcHHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~ 267 (500)
++|.|+||+|||||+..+.+.
T Consensus 6 i~viG~~~vGKTsli~~l~~~ 26 (166)
T d1ctqa_ 6 LVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 789999999999999999873
No 138
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=95.51 E-value=0.0053 Score=55.19 Aligned_cols=31 Identities=32% Similarity=0.611 Sum_probs=24.6
Q ss_pred eeeeCCCCCcHHHHHHHHHHHh--CCCEEEEee
Q 041423 247 YLLYGPPGTGKSTMIAAMANLL--NYDVYDLEL 277 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l--~~~i~~l~l 277 (500)
+++.||+|+|||||+.++..++ +.....+++
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~~~~~~~~ivn~ 35 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNL 35 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTTTSCEEEEEC
T ss_pred EEEEcCCCCcHHHHHHHHHHHHhhCCeEEEEec
Confidence 5789999999999999999876 344555554
No 139
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.49 E-value=0.014 Score=49.75 Aligned_cols=20 Identities=25% Similarity=0.464 Sum_probs=18.7
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|.+|+|||||+..+.+
T Consensus 9 v~lvG~~~vGKTsLi~r~~~ 28 (173)
T d2fn4a1 9 LVVVGGGGVGKSALTIQFIQ 28 (173)
T ss_dssp EEEEECTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 89999999999999998876
No 140
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.47 E-value=0.0069 Score=51.25 Aligned_cols=20 Identities=30% Similarity=0.484 Sum_probs=18.6
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|+||+|||||+..+.+
T Consensus 5 v~liG~~~vGKSsLi~rl~~ 24 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYCK 24 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999998886
No 141
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=95.47 E-value=0.008 Score=56.83 Aligned_cols=35 Identities=23% Similarity=0.187 Sum_probs=28.4
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhC-----CCEEEEeeccc
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLN-----YDVYDLELTAV 280 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~-----~~i~~l~l~~~ 280 (500)
-+.+.||+|+||||+++.|+..|. ..+..+++.+.
T Consensus 82 iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F 121 (308)
T d1sq5a_ 82 IISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGF 121 (308)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGG
T ss_pred EEEEeCCCCCCCcHHHHHHHHHHhhhcCCCceEEEeeeee
Confidence 467899999999999999999884 45666666665
No 142
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.43 E-value=0.01 Score=50.79 Aligned_cols=20 Identities=30% Similarity=0.634 Sum_probs=18.6
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
+++.|+||+|||||+..+.+
T Consensus 7 i~vvG~~~vGKTsLi~~~~~ 26 (175)
T d2f9la1 7 VVLIGDSGVGKSNLLSRFTR 26 (175)
T ss_dssp EEEESSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999999876
No 143
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=95.42 E-value=0.0049 Score=53.39 Aligned_cols=30 Identities=23% Similarity=0.328 Sum_probs=24.9
Q ss_pred ccceeeeCCCCCcHHHHHHHHHHHhCCCEEE
Q 041423 244 KRGYLLYGPPGTGKSTMIAAMANLLNYDVYD 274 (500)
Q Consensus 244 ~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~ 274 (500)
.+|+||.||+|+|||+++.++... |..++.
T Consensus 14 g~gvl~~G~sG~GKStlal~l~~~-g~~lv~ 43 (176)
T d1kkma_ 14 GLGVLITGDSGVGKSETALELVQR-GHRLIA 43 (176)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHT-TCEEEE
T ss_pred CEEEEEEeCCCCCHHHHHHHHHHc-CCeEEe
Confidence 468999999999999999988864 666554
No 144
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.40 E-value=0.0062 Score=51.61 Aligned_cols=20 Identities=35% Similarity=0.645 Sum_probs=18.6
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
+++.|+||+|||||+..+.+
T Consensus 5 i~vvG~~~vGKTSli~~l~~ 24 (166)
T d1g16a_ 5 ILLIGDSGVGKSCLLVRFVE 24 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 68999999999999999876
No 145
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=95.35 E-value=0.0066 Score=58.80 Aligned_cols=21 Identities=38% Similarity=0.597 Sum_probs=17.1
Q ss_pred ceeeeCCCCCcHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~ 266 (500)
-.+|.||||||||+++..+..
T Consensus 165 ~~vI~G~pGTGKTt~i~~~l~ 185 (359)
T d1w36d1 165 ISVISGGPGTGKTTTVAKLLA 185 (359)
T ss_dssp EEEEECCTTSTHHHHHHHHHH
T ss_pred eEEEEcCCCCCceehHHHHHH
Confidence 578999999999998865443
No 146
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.34 E-value=0.019 Score=48.54 Aligned_cols=20 Identities=25% Similarity=0.544 Sum_probs=18.3
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
+++.|++|+|||+|+..+.+
T Consensus 6 i~vvG~~~vGKTsLi~~~~~ 25 (170)
T d1ek0a_ 6 LVLLGEAAVGKSSIVLRFVS 25 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999998876
No 147
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.32 E-value=0.0063 Score=51.67 Aligned_cols=20 Identities=20% Similarity=0.423 Sum_probs=18.6
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|.+|+|||+|+..+.+
T Consensus 6 ivlvG~~~vGKTsLi~r~~~ 25 (167)
T d1z08a1 6 VVLLGEGCVGKTSLVLRYCE 25 (167)
T ss_dssp EEEECCTTSCHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999999886
No 148
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.31 E-value=0.0051 Score=52.87 Aligned_cols=20 Identities=30% Similarity=0.670 Sum_probs=18.9
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
+++.|++|+|||+|+..+.+
T Consensus 10 i~vvG~~~vGKTsli~~l~~ 29 (177)
T d1x3sa1 10 ILIIGESGVGKSSLLLRFTD 29 (177)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 88999999999999999886
No 149
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=95.29 E-value=0.0051 Score=53.55 Aligned_cols=27 Identities=37% Similarity=0.476 Sum_probs=22.9
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEE
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYD 274 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~ 274 (500)
+.+.|++|+||||+|+.+. .+|++++.
T Consensus 6 IgitG~~gSGKstva~~l~-~~g~~~~~ 32 (191)
T d1uf9a_ 6 IGITGNIGSGKSTVAALLR-SWGYPVLD 32 (191)
T ss_dssp EEEEECTTSCHHHHHHHHH-HTTCCEEE
T ss_pred EEEECCCCCCHHHHHHHHH-HCCCeEEE
Confidence 5688999999999999984 58888764
No 150
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.29 E-value=0.004 Score=51.85 Aligned_cols=21 Identities=29% Similarity=0.488 Sum_probs=19.3
Q ss_pred eeeeCCCCCcHHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~ 267 (500)
++|.|+||+|||||+..+.+.
T Consensus 3 I~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 3 LLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 789999999999999998873
No 151
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.28 E-value=0.023 Score=48.22 Aligned_cols=20 Identities=25% Similarity=0.464 Sum_probs=18.8
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|.||+|||||+..+.+
T Consensus 8 i~lvG~~~vGKTsLi~r~~~ 27 (171)
T d2erya1 8 LVVVGGGGVGKSALTIQFIQ 27 (171)
T ss_dssp EEEEECTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHh
Confidence 89999999999999999876
No 152
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=95.20 E-value=0.029 Score=51.34 Aligned_cols=23 Identities=26% Similarity=0.417 Sum_probs=20.7
Q ss_pred cceeeeCCCCCcHHHHHHHHHHH
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~ 267 (500)
-.++|.|.||+|||||+.+|.+.
T Consensus 33 l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 33 LTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp EEEEEEESTTSSHHHHHHHHHTS
T ss_pred cEEEEECCCCCcHHHHHHHHhCC
Confidence 46999999999999999999873
No 153
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=95.15 E-value=0.0047 Score=51.83 Aligned_cols=22 Identities=27% Similarity=0.428 Sum_probs=19.6
Q ss_pred ceeeeCCCCCcHHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~ 267 (500)
-++|.|+||+|||||+.++.+.
T Consensus 7 kI~ivG~~~vGKSSLi~~~~~~ 28 (169)
T d1upta_ 7 RILILGLDGAGKTTILYRLQVG 28 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3789999999999999998763
No 154
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.13 E-value=0.0069 Score=52.48 Aligned_cols=26 Identities=15% Similarity=0.381 Sum_probs=22.2
Q ss_pred ccceeeeCCCCCcHHHHHHHHHHHhC
Q 041423 244 KRGYLLYGPPGTGKSTMIAAMANLLN 269 (500)
Q Consensus 244 ~rg~LL~GPpGtGKTsla~aiA~~l~ 269 (500)
++-++|.||+|+|||||++.|.....
T Consensus 3 ~k~ivl~Gpsg~GK~tl~~~L~~~~~ 28 (178)
T d1kgda_ 3 RKTLVLLGAHGVGRRHIKNTLITKHP 28 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHCT
T ss_pred CCcEEEECCCCCCHHHHHHHHHHhCC
Confidence 35689999999999999999987653
No 155
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.11 E-value=0.0048 Score=54.42 Aligned_cols=22 Identities=23% Similarity=0.413 Sum_probs=20.4
Q ss_pred cceeeeCCCCCcHHHHHHHHHH
Q 041423 245 RGYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~ 266 (500)
|.++|.|+||+|||||+.++.+
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~ 22 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLT 22 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHc
Confidence 4789999999999999999987
No 156
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.05 E-value=0.016 Score=49.07 Aligned_cols=20 Identities=25% Similarity=0.614 Sum_probs=18.7
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
+++.|++|+|||+|+..+.+
T Consensus 9 i~vvG~~~vGKTsli~~~~~ 28 (170)
T d2g6ba1 9 VMLVGDSGVGKTCLLVRFKD 28 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999998876
No 157
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.02 E-value=0.042 Score=48.94 Aligned_cols=52 Identities=15% Similarity=0.102 Sum_probs=33.4
Q ss_pred CccccccCChhhHHHHHHHHHHHhhChHHHHhhCCC---cccceeeeCCCCCcHHHHH
Q 041423 207 ATFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKA---WKRGYLLYGPPGTGKSTMI 261 (500)
Q Consensus 207 ~~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~---~~rg~LL~GPpGtGKTsla 261 (500)
.+|+++.+++...+.|.+ . -+..+...+...+| .++.+++..|+|||||...
T Consensus 12 ~sF~~l~L~~~l~~~L~~-~--g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlay 66 (218)
T d2g9na1 12 DSFDDMNLSESLLRGIYA-Y--GFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATF 66 (218)
T ss_dssp CCGGGSCCCHHHHHHHHH-H--TCCSCCHHHHHHHHHHHHTCCEEEECCTTSSHHHHH
T ss_pred CCHHHCCCCHHHHHHHHH-C--CCCCCCHHHHHHHHHHHcCCCEEEEcccchhhhhhh
Confidence 379999888887777743 1 22233333333322 2357999999999999643
No 158
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.02 E-value=0.034 Score=46.83 Aligned_cols=20 Identities=25% Similarity=0.546 Sum_probs=18.7
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|.+|+|||+|+..+..
T Consensus 6 ivvvG~~~vGKTsli~r~~~ 25 (167)
T d1c1ya_ 6 LVVLGSGGVGKSALTVQFVQ 25 (167)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHc
Confidence 78999999999999999876
No 159
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=94.97 E-value=0.008 Score=51.26 Aligned_cols=21 Identities=33% Similarity=0.569 Sum_probs=18.9
Q ss_pred ceeeeCCCCCcHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~ 266 (500)
-+++.|+||+|||||+..+.+
T Consensus 18 kI~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 18 RILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp EEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 389999999999999998865
No 160
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.96 E-value=0.0077 Score=51.27 Aligned_cols=20 Identities=40% Similarity=0.728 Sum_probs=18.3
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|++|+|||+|+..+.+
T Consensus 4 i~lvG~~~vGKTsLi~~~~~ 23 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGG 23 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHT
T ss_pred EEEECCCCcCHHHHHHHHhC
Confidence 68999999999999998875
No 161
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.92 E-value=0.0099 Score=51.87 Aligned_cols=20 Identities=35% Similarity=0.670 Sum_probs=18.6
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
+++.|++|+|||||+..+.+
T Consensus 9 ivvvG~~~vGKTsli~~l~~ 28 (194)
T d2bcgy1 9 LLLIGNSGVGKSCLLLRFSD 28 (194)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHhh
Confidence 78999999999999998876
No 162
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=94.89 E-value=0.0065 Score=51.77 Aligned_cols=20 Identities=20% Similarity=0.516 Sum_probs=18.5
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|+||+|||||+.++.+
T Consensus 16 I~lvG~~~vGKTsLl~~l~~ 35 (186)
T d1f6ba_ 16 LVFLGLDNAGKTTLLHMLKD 35 (186)
T ss_dssp EEEEEETTSSHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHhC
Confidence 89999999999999999865
No 163
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=94.84 E-value=0.012 Score=54.13 Aligned_cols=39 Identities=23% Similarity=0.153 Sum_probs=29.1
Q ss_pred CCCcccceeeeCCCCCcHHHHHHHHHHH----hCCCEEEEeec
Q 041423 240 GKAWKRGYLLYGPPGTGKSTMIAAMANL----LNYDVYDLELT 278 (500)
Q Consensus 240 g~~~~rg~LL~GPpGtGKTsla~aiA~~----l~~~i~~l~l~ 278 (500)
|+.+..-++|.|+||+|||+++..+|.. .+.++..+++.
T Consensus 31 G~~~G~l~vi~G~~G~GKT~~~~~la~~~a~~~g~~v~~~s~E 73 (277)
T d1cr2a_ 31 GARGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAMLE 73 (277)
T ss_dssp SBCTTCEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEESS
T ss_pred CCCCCeEEEEEeCCCCCHHHHHHHHHHhhhhhcccceeEeeec
Confidence 4444445889999999999999888753 26677777654
No 164
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.83 E-value=0.015 Score=49.27 Aligned_cols=20 Identities=25% Similarity=0.610 Sum_probs=18.4
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
+++.|.+|+|||||+..+.+
T Consensus 5 i~viG~~~vGKTsLi~r~~~ 24 (171)
T d2erxa1 5 VAVFGAGGVGKSSLVLRFVK 24 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHh
Confidence 78999999999999998876
No 165
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=94.81 E-value=0.0044 Score=53.04 Aligned_cols=21 Identities=24% Similarity=0.409 Sum_probs=19.1
Q ss_pred ceeeeCCCCCcHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~ 266 (500)
-+++.|+||+|||||+..+.+
T Consensus 14 kIvlvG~~~vGKTSli~rl~~ 34 (173)
T d1e0sa_ 14 RILMLGLDAAGKTTILYKLKL 34 (173)
T ss_dssp EEEEEEETTSSHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 489999999999999999875
No 166
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=94.76 E-value=0.0088 Score=53.11 Aligned_cols=23 Identities=35% Similarity=0.686 Sum_probs=20.9
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhC
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLN 269 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~ 269 (500)
++|.||+|+|||||++.+.....
T Consensus 5 ivi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 5 YIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp EEEECCTTSCHHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhhCC
Confidence 78899999999999999998864
No 167
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=94.75 E-value=0.0076 Score=51.79 Aligned_cols=29 Identities=24% Similarity=0.324 Sum_probs=23.4
Q ss_pred ccceeeeCCCCCcHHHHHHHHHHHhCCCEE
Q 041423 244 KRGYLLYGPPGTGKSTMIAAMANLLNYDVY 273 (500)
Q Consensus 244 ~rg~LL~GPpGtGKTsla~aiA~~l~~~i~ 273 (500)
.+|+||.||+|+|||+++.++... |..++
T Consensus 15 g~gvli~G~sg~GKS~la~~l~~~-g~~li 43 (169)
T d1ko7a2 15 GVGVLITGDSGIGKSETALELIKR-GHRLV 43 (169)
T ss_dssp TEEEEEEESTTSSHHHHHHHHHHT-TCEEE
T ss_pred CEEEEEEeCCCCCHHHHHHHHHHc-CCeEE
Confidence 468999999999999999887765 55443
No 168
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=94.71 E-value=0.0072 Score=56.27 Aligned_cols=34 Identities=26% Similarity=0.540 Sum_probs=22.2
Q ss_pred ceeeeCCCCCcHHHHH-HHHHHHh---CC---CEEEEeecc
Q 041423 246 GYLLYGPPGTGKSTMI-AAMANLL---NY---DVYDLELTA 279 (500)
Q Consensus 246 g~LL~GPpGtGKTsla-~aiA~~l---~~---~i~~l~l~~ 279 (500)
.+|+.||||||||+++ ..++..+ +. .+..+..+.
T Consensus 16 ~~lI~g~aGTGKTt~l~~rv~~ll~~~~~~~~~ILvlt~tn 56 (306)
T d1uaaa1 16 PCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTN 56 (306)
T ss_dssp EEEECCCTTSCHHHHHHHHHHHHHHHHCCCGGGEEEEESSH
T ss_pred CEEEEeeCCccHHHHHHHHHHHHHHhcCCChhHEEEEeCcH
Confidence 4889999999999765 3444332 32 466666553
No 169
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=94.70 E-value=0.008 Score=52.00 Aligned_cols=30 Identities=33% Similarity=0.331 Sum_probs=24.2
Q ss_pred ccceeeeCCCCCcHHHHHHHHHHHhCCCEEE
Q 041423 244 KRGYLLYGPPGTGKSTMIAAMANLLNYDVYD 274 (500)
Q Consensus 244 ~rg~LL~GPpGtGKTsla~aiA~~l~~~i~~ 274 (500)
.+|+||.||+|+|||+++.++... |..++.
T Consensus 15 g~gvli~G~sG~GKS~lal~l~~~-G~~lva 44 (177)
T d1knxa2 15 GVGVLLTGRSGIGKSECALDLINK-NHLFVG 44 (177)
T ss_dssp TEEEEEEESSSSSHHHHHHHHHTT-TCEEEE
T ss_pred CEEEEEEcCCCCCHHHHHHHHHHc-CCceec
Confidence 468999999999999999887653 655554
No 170
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=94.69 E-value=0.047 Score=50.40 Aligned_cols=22 Identities=32% Similarity=0.575 Sum_probs=20.3
Q ss_pred eeeeCCCCCcHHHHHHHHHHHh
Q 041423 247 YLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l 268 (500)
+++.|++|+|||+|+..++...
T Consensus 71 ~~If~~~g~GKt~l~~~i~~~~ 92 (276)
T d2jdid3 71 IGLFGGAGVGKTVLIMELINNV 92 (276)
T ss_dssp EEEEECTTSSHHHHHHHHHHHH
T ss_pred EEeeCCCCCCHHHHHHHHHHHH
Confidence 8999999999999999998774
No 171
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=94.68 E-value=0.024 Score=52.72 Aligned_cols=27 Identities=30% Similarity=0.589 Sum_probs=23.1
Q ss_pred Ccccc--eeeeCCCCCcHHHHHHHHHHHh
Q 041423 242 AWKRG--YLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 242 ~~~rg--~LL~GPpGtGKTsla~aiA~~l 268 (500)
|..+| .++.||+|||||+|+..+++..
T Consensus 39 PigrGQr~~I~g~~g~GKT~l~~~i~~~~ 67 (289)
T d1xpua3 39 PIGRGQRGLIVAPPKAGKTMLLQNIAQSI 67 (289)
T ss_dssp CCBTTCEEEEEECSSSSHHHHHHHHHHHH
T ss_pred cccCCCeeeEeCCCCCCHHHHHHHHHHHH
Confidence 44555 8999999999999999999865
No 172
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=94.67 E-value=0.0065 Score=53.78 Aligned_cols=28 Identities=29% Similarity=0.312 Sum_probs=23.6
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEEE
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYDL 275 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~l 275 (500)
+.|.|++||||||+++.+. .+|.++++.
T Consensus 5 IgITG~igSGKStv~~~l~-~~G~~vida 32 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIANLFT-DLGVPLVDA 32 (205)
T ss_dssp EEEECSTTSCHHHHHHHHH-TTTCCEEEH
T ss_pred EEEECCCCCCHHHHHHHHH-HCCCeEEEc
Confidence 4589999999999999886 689888764
No 173
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=94.67 E-value=0.0067 Score=53.86 Aligned_cols=27 Identities=44% Similarity=0.507 Sum_probs=23.0
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEE
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYD 274 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~ 274 (500)
+.|.|++||||||+++.+. .+|++++.
T Consensus 6 IgitG~igSGKStv~~~l~-~~G~~vid 32 (208)
T d1vhta_ 6 VALTGGIGSGKSTVANAFA-DLGINVID 32 (208)
T ss_dssp EEEECCTTSCHHHHHHHHH-HTTCEEEE
T ss_pred EEEECCCcCCHHHHHHHHH-HCCCcEEE
Confidence 5689999999999999886 77887765
No 174
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=94.65 E-value=0.0083 Score=54.00 Aligned_cols=31 Identities=26% Similarity=0.383 Sum_probs=23.1
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHhCCCEEEE
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLLNYDVYDL 275 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l 275 (500)
+..+|.|++|+|||||+.+|........-.+
T Consensus 96 kt~~~~G~SGVGKSTLiN~L~~~~~~~T~~v 126 (225)
T d1u0la2 96 KISTMAGLSGVGKSSLLNAINPGLKLRVSEV 126 (225)
T ss_dssp SEEEEECSTTSSHHHHHHHHSTTCCCC----
T ss_pred CeEEEECCCCCCHHHHHHhhcchhhhhccCc
Confidence 3678999999999999999987766554443
No 175
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=94.62 E-value=0.034 Score=48.54 Aligned_cols=17 Identities=29% Similarity=0.514 Sum_probs=14.9
Q ss_pred cceeeeCCCCCcHHHHH
Q 041423 245 RGYLLYGPPGTGKSTMI 261 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla 261 (500)
+.+++.+|+|+|||..+
T Consensus 41 ~~~il~apTGsGKT~~a 57 (202)
T d2p6ra3 41 KNLLLAMPTAAGKTLLA 57 (202)
T ss_dssp SCEEEECSSHHHHHHHH
T ss_pred CCEEEEcCCCCchhHHH
Confidence 46899999999999875
No 176
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.48 E-value=0.063 Score=47.07 Aligned_cols=49 Identities=27% Similarity=0.245 Sum_probs=28.2
Q ss_pred ccccccCChhhHHHHHHHHHHHhhChHHHHhhCCC---cccceeeeCCCCCcHHH
Q 041423 208 TFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKA---WKRGYLLYGPPGTGKST 259 (500)
Q Consensus 208 ~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~---~~rg~LL~GPpGtGKTs 259 (500)
+|+++.+++...+.|.+. . +..+...+...+| -++.+++.+|+|||||.
T Consensus 2 sF~~l~L~~~l~~~L~~~--g-~~~pt~iQ~~aip~il~g~dvi~~a~tGsGKTl 53 (206)
T d1s2ma1 2 TFEDFYLKRELLMGIFEA--G-FEKPSPIQEEAIPVAITGRDILARAKNGTGKTA 53 (206)
T ss_dssp CGGGGCCCHHHHHHHHHT--T-CCSCCHHHHHHHHHHHHTCCEEEECCTTSCHHH
T ss_pred ChHHcCCCHHHHHHHHHC--C-CCCCCHHHHHHHHHHHcCCCEEEecCCcchhhh
Confidence 577777777766666431 1 1222222221111 13569999999999994
No 177
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.43 E-value=0.065 Score=47.81 Aligned_cols=52 Identities=21% Similarity=0.190 Sum_probs=33.0
Q ss_pred CCCccccccCChhhHHHHHHHHHHHhhChHHHHhhCCC---cccceeeeCCCCCcHHH
Q 041423 205 HPATFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKA---WKRGYLLYGPPGTGKST 259 (500)
Q Consensus 205 ~~~~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~---~~rg~LL~GPpGtGKTs 259 (500)
.-.+|+++.+++...+.|.+. . +..+...+...+| .++.++...|+|||||.
T Consensus 15 ~~~sF~~l~L~~~l~~~L~~~--g-~~~pt~IQ~~aIp~il~g~dvi~~a~TGSGKTl 69 (222)
T d2j0sa1 15 VTPTFDTMGLREDLLRGIYAY--G-FEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 69 (222)
T ss_dssp CCCSGGGGCCCHHHHHHHHHH--T-CCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHH
T ss_pred CCCCHHHCCCCHHHHHHHHHC--C-CCCCCHHHHHHHHHHHCCCCeEEEcCcchhhhh
Confidence 344799999888877776431 1 2222222322222 24679999999999995
No 178
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=94.41 E-value=0.0072 Score=51.45 Aligned_cols=22 Identities=32% Similarity=0.552 Sum_probs=19.0
Q ss_pred ceeeeCCCCCcHHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~ 267 (500)
.+.|.|+||+|||||+.+|.+.
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~~ 23 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVKK 23 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC-
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3789999999999999999753
No 179
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=94.38 E-value=0.0052 Score=53.04 Aligned_cols=24 Identities=42% Similarity=0.425 Sum_probs=21.1
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCC
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNY 270 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~ 270 (500)
.+|+||+|+||||++.||.-.|..
T Consensus 27 tvi~G~NGsGKStil~Ai~~~L~g 50 (222)
T d1qhla_ 27 TTLSGGNGAGKSTTMAAFVTALIP 50 (222)
T ss_dssp HHHHSCCSHHHHHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHHHhcC
Confidence 578999999999999999987743
No 180
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=94.37 E-value=0.0094 Score=52.69 Aligned_cols=22 Identities=27% Similarity=0.425 Sum_probs=20.1
Q ss_pred eeeeCCCCCcHHHHHHHHHHHh
Q 041423 247 YLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l 268 (500)
+.+.|++||||||+++.|+..|
T Consensus 5 IviEG~dGsGKsT~~~~L~~~L 26 (210)
T d4tmka_ 5 IVIEGLEGAGKTTARNVVVETL 26 (210)
T ss_dssp EEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 6677999999999999999887
No 181
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=94.36 E-value=0.0062 Score=52.30 Aligned_cols=21 Identities=29% Similarity=0.471 Sum_probs=19.3
Q ss_pred ceeeeCCCCCcHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~ 266 (500)
.++|.|+||+|||||+.+|.+
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~ 22 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTG 22 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 478999999999999999986
No 182
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.35 E-value=0.041 Score=46.49 Aligned_cols=20 Identities=25% Similarity=0.454 Sum_probs=18.6
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|++|+|||||+..+.+
T Consensus 7 i~lvG~~~vGKTsll~~~~~ 26 (169)
T d1x1ra1 7 LVVVGDGGVGKSALTIQFFQ 26 (169)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 68899999999999999886
No 183
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=94.25 E-value=0.011 Score=50.02 Aligned_cols=21 Identities=29% Similarity=0.422 Sum_probs=19.0
Q ss_pred ceeeeCCCCCcHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~ 266 (500)
-++|.|++|+|||||+..+.+
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~ 24 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIAS 24 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 378999999999999999876
No 184
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=94.20 E-value=0.0076 Score=52.52 Aligned_cols=27 Identities=26% Similarity=0.335 Sum_probs=23.6
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEE
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVY 273 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~ 273 (500)
+.+-|+.|+||||+++.|+.+++...+
T Consensus 12 I~ieG~~GsGKTTl~~~L~~~l~~~~~ 38 (197)
T d2vp4a1 12 VLIEGNIGSGKTTYLNHFEKYKNDICL 38 (197)
T ss_dssp EEEECSTTSCHHHHHHTTGGGTTTEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCcEE
Confidence 678899999999999999999976544
No 185
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.19 E-value=0.014 Score=49.73 Aligned_cols=20 Identities=30% Similarity=0.602 Sum_probs=8.4
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|.||+|||||+.++.+
T Consensus 9 i~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 9 LLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEECCCCC-----------
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999998875
No 186
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.17 E-value=0.02 Score=50.13 Aligned_cols=31 Identities=23% Similarity=0.415 Sum_probs=25.2
Q ss_pred eeeeCCCCCcHHHHHHHHHHHh---CCCEEEEee
Q 041423 247 YLLYGPPGTGKSTMIAAMANLL---NYDVYDLEL 277 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l---~~~i~~l~l 277 (500)
+.+.|+.|+||||+++.|+..| |.++..+..
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~~g~~v~~~~~ 36 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAF 36 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEec
Confidence 4578999999999999999977 667666543
No 187
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.04 E-value=0.013 Score=49.83 Aligned_cols=20 Identities=25% Similarity=0.637 Sum_probs=18.7
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|++|+|||+|+..+.+
T Consensus 5 i~lvG~~~vGKTsli~r~~~ 24 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLT 24 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHh
Confidence 78999999999999999886
No 188
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=93.97 E-value=0.0088 Score=52.10 Aligned_cols=20 Identities=35% Similarity=0.536 Sum_probs=18.9
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
+.|.|+||+|||||+.+|.+
T Consensus 26 I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 26 IALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp EEEEEBTTSSHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHhcC
Confidence 88999999999999999975
No 189
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=93.93 E-value=0.013 Score=53.78 Aligned_cols=22 Identities=36% Similarity=0.579 Sum_probs=19.2
Q ss_pred eeeeCCCCCcHHHHHHHHHHHh
Q 041423 247 YLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l 268 (500)
.+|+||+|+||||++.||+-.|
T Consensus 26 n~IvG~NGsGKStiL~Ai~~~l 47 (292)
T g1f2t.1 26 NLIIGQNGSGKSSLLDAILVGL 47 (292)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 3899999999999999998543
No 190
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.92 E-value=0.022 Score=50.59 Aligned_cols=32 Identities=25% Similarity=0.245 Sum_probs=27.3
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEEEeec
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYDLELT 278 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~ 278 (500)
+.|.|+-||||||+++.|+..|......+...
T Consensus 6 I~iEG~DGsGKST~~~~L~~~L~~~~~~~~~p 37 (214)
T d1tmka_ 6 ILIEGLDRTGKTTQCNILYKKLQPNCKLLKFP 37 (214)
T ss_dssp EEEEESTTSSHHHHHHHHHHHTTTSEEEEESS
T ss_pred EEEECCCCCcHHHHHHHHHHHHHhCCEEEEEC
Confidence 56789999999999999999998887766543
No 191
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.86 E-value=0.011 Score=51.02 Aligned_cols=20 Identities=30% Similarity=0.562 Sum_probs=18.5
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|+||+|||||+..+.+
T Consensus 8 i~ivG~~~vGKTsLi~~l~~ 27 (186)
T d2f7sa1 8 LLALGDSGVGKTTFLYRYTD 27 (186)
T ss_dssp EEEESCTTSSHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHhc
Confidence 78999999999999999875
No 192
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=93.85 E-value=0.01 Score=49.62 Aligned_cols=20 Identities=35% Similarity=0.707 Sum_probs=18.6
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|+||+|||||+.++.+
T Consensus 4 I~lvG~~nvGKSsLin~l~~ 23 (161)
T d2gj8a1 4 VVIAGRPNAGKSSLLNALAG 23 (161)
T ss_dssp EEEEESTTSSHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHhC
Confidence 78999999999999999975
No 193
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.84 E-value=0.014 Score=49.57 Aligned_cols=20 Identities=25% Similarity=0.630 Sum_probs=18.5
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|+||+|||||+..+.+
T Consensus 5 i~~vG~~~vGKSsLi~~~~~ 24 (175)
T d1ky3a_ 5 VIILGDSGVGKTSLMHRYVN 24 (175)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHc
Confidence 78999999999999999875
No 194
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=93.79 E-value=0.013 Score=55.87 Aligned_cols=34 Identities=32% Similarity=0.515 Sum_probs=24.9
Q ss_pred eeeeCCCCCcHHHHHHHHHHHh---CCCE--EEEeeccc
Q 041423 247 YLLYGPPGTGKSTMIAAMANLL---NYDV--YDLELTAV 280 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l---~~~i--~~l~l~~~ 280 (500)
+-+.||||+|||||+.+++..+ |..+ +.++.++-
T Consensus 57 IgitG~pGaGKSTLi~~l~~~~~~~g~~vavlavDpss~ 95 (327)
T d2p67a1 57 LGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSP 95 (327)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC--
T ss_pred EEeeCCCCCCHHHHHHHHHHHHHhcCCceeeecCCCcee
Confidence 7799999999999999999876 3443 44555443
No 195
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=93.66 E-value=0.016 Score=49.85 Aligned_cols=20 Identities=25% Similarity=0.645 Sum_probs=18.7
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
+++.|.||+|||||+..+.+
T Consensus 5 v~vvG~~~vGKSSLi~~l~~ 24 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVN 24 (184)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999999886
No 196
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=93.61 E-value=0.014 Score=52.61 Aligned_cols=27 Identities=22% Similarity=0.230 Sum_probs=23.3
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEE
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVY 273 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~ 273 (500)
+.|.|+.||||||+|+.++..+|+.++
T Consensus 4 IgiTG~igSGKsTva~~l~e~~g~~~i 30 (241)
T d1deka_ 4 IFLSGVKRSGKDTTADFIMSNYSAVKY 30 (241)
T ss_dssp EEEECCTTSSHHHHHHHHHHHSCEEEC
T ss_pred EEEECCCCCCHHHHHHHHHHhCCCeEE
Confidence 578999999999999999998876543
No 197
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.58 E-value=0.017 Score=48.52 Aligned_cols=20 Identities=15% Similarity=0.366 Sum_probs=18.7
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|++|+|||||+..+.+
T Consensus 5 v~liG~~~vGKTsLl~~~~~ 24 (165)
T d1z06a1 5 IIVIGDSNVGKTCLTYRFCA 24 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999999886
No 198
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.51 E-value=0.088 Score=46.47 Aligned_cols=52 Identities=15% Similarity=0.114 Sum_probs=31.9
Q ss_pred CccccccCChhhHHHHHHHHHHHhhChHHHHhhCCC---cccceeeeCCCCCcHHHHH
Q 041423 207 ATFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKA---WKRGYLLYGPPGTGKSTMI 261 (500)
Q Consensus 207 ~~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~---~~rg~LL~GPpGtGKTsla 261 (500)
.+|+++.++++..+.|.+ . -+..+...+...++ .++.+++..|+|||||...
T Consensus 10 ~sF~~l~l~~~l~~~L~~-~--g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKT~a~ 64 (212)
T d1qdea_ 10 YKFDDMELDENLLRGVFG-Y--GFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTF 64 (212)
T ss_dssp CCGGGGTCCHHHHHHHHH-H--TCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHH
T ss_pred cChhhCCCCHHHHHHHHH-C--CCCCCCHHHHHHHHHHHcCCCEEeecccccchhhhh
Confidence 368888888777776643 1 12222223332222 2456999999999999643
No 199
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=93.46 E-value=0.018 Score=53.97 Aligned_cols=34 Identities=21% Similarity=0.478 Sum_probs=22.3
Q ss_pred ceeeeCCCCCcHHHHH-HHHHHHh---CC---CEEEEeecc
Q 041423 246 GYLLYGPPGTGKSTMI-AAMANLL---NY---DVYDLELTA 279 (500)
Q Consensus 246 g~LL~GPpGtGKTsla-~aiA~~l---~~---~i~~l~l~~ 279 (500)
.+++.||||||||+++ ..+|..+ +. .+..+..+.
T Consensus 26 ~~lV~g~aGSGKTt~l~~ri~~ll~~~~~~p~~il~lt~t~ 66 (318)
T d1pjra1 26 PLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTN 66 (318)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSH
T ss_pred CEEEEecCCccHHHHHHHHHHHHHHcCCCCHHHeEeEeccH
Confidence 4889999999999755 4455543 22 355555544
No 200
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=93.42 E-value=0.019 Score=54.66 Aligned_cols=33 Identities=36% Similarity=0.538 Sum_probs=25.0
Q ss_pred eeeeCCCCCcHHHHHHHHHHHh---CCCE--EEEeecc
Q 041423 247 YLLYGPPGTGKSTMIAAMANLL---NYDV--YDLELTA 279 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l---~~~i--~~l~l~~ 279 (500)
+-+.||||+|||||+.+++.++ +..+ +.++.++
T Consensus 54 igitG~pGaGKSTli~~l~~~~~~~g~~vaViavDpss 91 (323)
T d2qm8a1 54 VGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSS 91 (323)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGGG
T ss_pred EeeeCCCCCCHHHHHHHHHHHHhhcCCceeeeeccccc
Confidence 6799999999999999999864 4444 3444444
No 201
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.25 E-value=0.021 Score=48.62 Aligned_cols=20 Identities=30% Similarity=0.582 Sum_probs=18.6
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|+||+|||||+..+.+
T Consensus 9 I~vvG~~~vGKSSli~~~~~ 28 (174)
T d1wmsa_ 9 VILLGDGGVGKSSLMNRYVT 28 (174)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHh
Confidence 78999999999999998876
No 202
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=93.25 E-value=0.017 Score=49.38 Aligned_cols=22 Identities=27% Similarity=0.478 Sum_probs=19.8
Q ss_pred ceeeeCCCCCcHHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~ 267 (500)
-+.|.|.||+|||||+.++.+.
T Consensus 7 ~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4889999999999999999863
No 203
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=93.23 E-value=0.017 Score=53.86 Aligned_cols=22 Identities=36% Similarity=0.579 Sum_probs=19.2
Q ss_pred eeeeCCCCCcHHHHHHHHHHHh
Q 041423 247 YLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l 268 (500)
.+|+||+|+|||++..||+-.|
T Consensus 26 ~vi~G~NgsGKTtileAI~~~l 47 (369)
T g1ii8.1 26 NLIIGQNGSGKSSLLDAILVGL 47 (369)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 5789999999999999997544
No 204
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.23 E-value=0.018 Score=48.58 Aligned_cols=21 Identities=19% Similarity=0.320 Sum_probs=19.2
Q ss_pred ceeeeCCCCCcHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~ 266 (500)
-++|.|++|+|||||+..+.+
T Consensus 6 Kv~liG~~~vGKTsLl~~~~~ 26 (167)
T d1xtqa1 6 KIAILGYRSVGKSSLTIQFVE 26 (167)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 488999999999999999876
No 205
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=93.13 E-value=0.015 Score=54.73 Aligned_cols=24 Identities=33% Similarity=0.602 Sum_probs=21.0
Q ss_pred ce-eeeCCCCCcHHHHHHHHHHHhC
Q 041423 246 GY-LLYGPPGTGKSTMIAAMANLLN 269 (500)
Q Consensus 246 g~-LL~GPpGtGKTsla~aiA~~l~ 269 (500)
|+ +|+||+|||||+++.||+-.|+
T Consensus 27 ~lnvi~G~NGsGKS~il~AI~~~L~ 51 (329)
T g1xew.1 27 GFTAIVGANGSGKSNIGDAILFVLG 51 (329)
T ss_dssp SEEEEEECTTSSSHHHHHHHHHHTT
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHC
Confidence 54 8999999999999999987664
No 206
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.05 E-value=0.019 Score=48.96 Aligned_cols=23 Identities=13% Similarity=0.303 Sum_probs=20.0
Q ss_pred cceeeeCCCCCcHHHHHHHHHHH
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~ 267 (500)
+-+++.|++|+|||+|+..+.+.
T Consensus 3 ~KivvvG~~~vGKTsLi~~~~~~ 25 (177)
T d1kmqa_ 3 KKLVIVGDGACGKTCLLIVNSKD 25 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHhC
Confidence 35789999999999999998863
No 207
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.01 E-value=0.029 Score=50.24 Aligned_cols=30 Identities=20% Similarity=0.150 Sum_probs=25.3
Q ss_pred ccceeeeCCCCCcHHHHHHHHHHHhCCCEE
Q 041423 244 KRGYLLYGPPGTGKSTMIAAMANLLNYDVY 273 (500)
Q Consensus 244 ~rg~LL~GPpGtGKTsla~aiA~~l~~~i~ 273 (500)
|+=+.+-|+-||||||+++.|+.+++...+
T Consensus 2 pk~IviEG~~GsGKST~~~~L~~~l~~~~i 31 (241)
T d2ocpa1 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWHV 31 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCTTSEE
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHhhcCC
Confidence 345788999999999999999999976544
No 208
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.55 E-value=0.029 Score=48.08 Aligned_cols=21 Identities=14% Similarity=0.371 Sum_probs=19.2
Q ss_pred ceeeeCCCCCcHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~ 266 (500)
-++|.|.+|+|||||+..+..
T Consensus 7 KivviG~~~vGKTsli~~~~~ 27 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLLISYTT 27 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 489999999999999998876
No 209
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=92.50 E-value=0.025 Score=48.04 Aligned_cols=20 Identities=30% Similarity=0.582 Sum_probs=18.7
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|.||+|||||+.+|.+
T Consensus 8 I~iiG~~nvGKSSLin~L~~ 27 (179)
T d1egaa1 8 IAIVGRPNVGKSTLLNKLLG 27 (179)
T ss_dssp EEEECSSSSSHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHhC
Confidence 78999999999999999975
No 210
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=92.50 E-value=0.0096 Score=49.82 Aligned_cols=21 Identities=33% Similarity=0.621 Sum_probs=19.4
Q ss_pred eeeeCCCCCcHHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~ 267 (500)
+.|.|.||+|||||+.+|.+.
T Consensus 3 I~liG~~n~GKSSLin~l~g~ 23 (160)
T d1xzpa2 3 MVIVGKPNVGKSTLLNRLLNE 23 (160)
T ss_dssp EEEECCHHHHTCHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 679999999999999999875
No 211
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=92.47 E-value=0.025 Score=48.40 Aligned_cols=20 Identities=40% Similarity=0.644 Sum_probs=18.6
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
+.+.|.||+|||||+.+|.+
T Consensus 11 V~iiG~~~~GKSTLin~l~~ 30 (186)
T d1mkya2 11 VAIVGRPNVGKSTLFNAILN 30 (186)
T ss_dssp EEEECSTTSSHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHC
Confidence 78999999999999999976
No 212
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=92.45 E-value=0.041 Score=53.85 Aligned_cols=34 Identities=26% Similarity=0.372 Sum_probs=26.2
Q ss_pred cceeeeCCCCCcHHHHHHHHHHH---hCCCEEEEeec
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANL---LNYDVYDLELT 278 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~---l~~~i~~l~l~ 278 (500)
+++++.|++|+|||++++.+... .+.+++.+|..
T Consensus 51 ~H~~I~G~tGsGKT~~l~~li~~~~~~g~~~iiiD~k 87 (433)
T d1e9ra_ 51 RHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPN 87 (433)
T ss_dssp GCEEEEECTTSSHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 57999999999999998766543 26667777654
No 213
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.43 E-value=0.03 Score=47.60 Aligned_cols=20 Identities=40% Similarity=0.605 Sum_probs=18.4
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|++|+|||+|+..+.+
T Consensus 6 v~lvG~~~vGKTsLi~~~~~ 25 (172)
T d2g3ya1 6 VVLIGEQGVGKSTLANIFAG 25 (172)
T ss_dssp EEEECCTTSSHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999998875
No 214
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=92.35 E-value=0.018 Score=49.39 Aligned_cols=21 Identities=29% Similarity=0.509 Sum_probs=18.5
Q ss_pred ceeeeCCCCCcHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~ 266 (500)
-++|.|+||+|||||+..+.+
T Consensus 19 KI~lvG~~~vGKTsLi~~l~~ 39 (182)
T d1moza_ 19 RILILGLDGAGKTTILYRLQI 39 (182)
T ss_dssp EEEEEEETTSSHHHHHHHTCC
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 489999999999999998753
No 215
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.31 E-value=0.015 Score=52.13 Aligned_cols=25 Identities=24% Similarity=0.298 Sum_probs=22.3
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCC
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNY 270 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~ 270 (500)
=+.+-||-||||||+++.|+..|..
T Consensus 4 ~I~ieG~dGsGKST~~~~L~~~l~~ 28 (241)
T d1p5zb_ 4 KISIEGNIAAGKSTFVNILKQLCED 28 (241)
T ss_dssp EEEEECSTTSSHHHHHTTTGGGCTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhc
Confidence 3678999999999999999998854
No 216
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=92.31 E-value=0.02 Score=53.36 Aligned_cols=24 Identities=33% Similarity=0.571 Sum_probs=20.6
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCC
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNY 270 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~ 270 (500)
-+|+||+|+|||+++.||+-.++.
T Consensus 27 nvlvG~NgsGKS~iL~Ai~~~lg~ 50 (308)
T d1e69a_ 27 TAIVGPNGSGKSNIIDAIKWVFGE 50 (308)
T ss_dssp EEEECCTTTCSTHHHHHHHHTSCC
T ss_pred EEEECCCCCcHHHHHHHHHHHhCC
Confidence 479999999999999999876643
No 217
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=92.30 E-value=0.028 Score=52.28 Aligned_cols=35 Identities=20% Similarity=0.273 Sum_probs=24.4
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHh---CCCEEEEeeccc
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLL---NYDVYDLELTAV 280 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l---~~~i~~l~l~~~ 280 (500)
-+.+.|++|+||||+++++++.+ +.+...++..+.
T Consensus 6 IIgIaG~SGSGKTTva~~l~~i~~~~~v~~~iI~~Dsf 43 (288)
T d1a7ja_ 6 IISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAF 43 (288)
T ss_dssp EEEEESCC---CCTHHHHHHHHHHHHTCCEEEEEGGGG
T ss_pred EEEEECCCCCcHHHHHHHHHHHHhhcCCCeEEEeCCCC
Confidence 47799999999999999999876 455555655554
No 218
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=92.27 E-value=0.023 Score=48.69 Aligned_cols=21 Identities=33% Similarity=0.528 Sum_probs=18.3
Q ss_pred ceeeeCCCCCcHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~ 266 (500)
-+.|.|+||+|||||+.++.+
T Consensus 3 ~VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSEE
T ss_pred eEEEECCCCCCHHHHHHHHhC
Confidence 367999999999999999854
No 219
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.23 E-value=0.015 Score=49.40 Aligned_cols=21 Identities=33% Similarity=0.517 Sum_probs=17.9
Q ss_pred ceeeeCCCCCcHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~ 266 (500)
-+++.|++|+|||||+..+.+
T Consensus 5 Ki~vvG~~~vGKTsli~~~~~ 25 (170)
T d1i2ma_ 5 KLVLVGDGGTGKTTFVKRHLT 25 (170)
T ss_dssp EEEEEECTTSSHHHHHHTTC-
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 378999999999999998765
No 220
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.98 E-value=0.034 Score=47.86 Aligned_cols=20 Identities=25% Similarity=0.494 Sum_probs=18.6
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|.+|+|||||+..+.+
T Consensus 12 i~lvG~~~vGKTsLi~r~~~ 31 (185)
T d2atxa1 12 CVVVGDGAVGKTCLLMSYAN 31 (185)
T ss_dssp EEEEECTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhh
Confidence 78999999999999999876
No 221
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.98 E-value=0.033 Score=47.70 Aligned_cols=21 Identities=19% Similarity=0.431 Sum_probs=19.0
Q ss_pred ceeeeCCCCCcHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~ 266 (500)
-++|.|.+|+|||+|+..+.+
T Consensus 4 KivliG~~~vGKTsli~r~~~ 24 (179)
T d1m7ba_ 4 KIVVVGDSQCGKTALLHVFAK 24 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 378999999999999998876
No 222
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=91.78 E-value=0.019 Score=48.81 Aligned_cols=21 Identities=24% Similarity=0.428 Sum_probs=18.8
Q ss_pred ceeeeCCCCCcHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~ 266 (500)
-+.|.|+|++|||||+.+|.+
T Consensus 18 ~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 18 EVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp EEEEEECTTSSHHHHHTTTCC
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 489999999999999998854
No 223
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=91.62 E-value=0.29 Score=45.08 Aligned_cols=21 Identities=24% Similarity=0.257 Sum_probs=18.5
Q ss_pred eeeeCCCCCcHHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~ 267 (500)
+++.|++|+|||+++..++..
T Consensus 71 ~~If~~~g~GKt~ll~~~~~~ 91 (285)
T d2jdia3 71 ELIIGDRQTGKTSIAIDTIIN 91 (285)
T ss_dssp CEEEESTTSSHHHHHHHHHHH
T ss_pred EEeecCCCCChHHHHHHHHHh
Confidence 899999999999998877754
No 224
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=91.62 E-value=0.011 Score=53.30 Aligned_cols=30 Identities=23% Similarity=0.460 Sum_probs=19.1
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCCCEEEE
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNYDVYDL 275 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~~i~~l 275 (500)
..+|.|++|+|||||+.++........-.+
T Consensus 99 ~~vl~G~SGVGKSSLiN~L~~~~~~~t~~v 128 (231)
T d1t9ha2 99 TTVFAGQSGVGKSSLLNAISPELGLRTNEI 128 (231)
T ss_dssp EEEEEESHHHHHHHHHHHHCC---------
T ss_pred eEEEECCCCccHHHHHHhhccHhHhhhccc
Confidence 467889999999999999987665544433
No 225
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.58 E-value=0.039 Score=47.68 Aligned_cols=20 Identities=15% Similarity=0.408 Sum_probs=18.2
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|++|+|||||+..+.+
T Consensus 6 vvllG~~~vGKTSli~r~~~ 25 (191)
T d2ngra_ 6 CVVVGDGAVGKTCLLISYTT 25 (191)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999988875
No 226
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=91.42 E-value=0.031 Score=47.66 Aligned_cols=21 Identities=43% Similarity=0.615 Sum_probs=18.7
Q ss_pred ceeeeCCCCCcHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~ 266 (500)
.+.|.|.||+|||||+.++.+
T Consensus 3 ~VaivG~~nvGKSTLin~L~~ 23 (180)
T d1udxa2 3 DVGLVGYPNAGKSSLLAAMTR 23 (180)
T ss_dssp SEEEECCGGGCHHHHHHHHCS
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 378999999999999999864
No 227
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=91.35 E-value=0.093 Score=48.08 Aligned_cols=47 Identities=17% Similarity=0.204 Sum_probs=35.7
Q ss_pred cccceeeeCCCCCcHHHHHHHHHHHh---CCCEEEEeecccCChHHHHHHHHh
Q 041423 243 WKRGYLLYGPPGTGKSTMIAAMANLL---NYDVYDLELTAVKDNTELRKLLIE 292 (500)
Q Consensus 243 ~~rg~LL~GPpGtGKTsla~aiA~~l---~~~i~~l~l~~~~~~~~l~~l~~~ 292 (500)
.+|-+++.|.=|+||||++.++|..+ |..+..+++..-. .+..+|..
T Consensus 7 ~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~Dp~~---~l~~~lg~ 56 (296)
T d1ihua1 7 IPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDPAS---NVGQVFSQ 56 (296)
T ss_dssp CCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTC---CHHHHTTS
T ss_pred CCeEEEEECCCcChHHHHHHHHHHHHHHCCCCEEEEeCCCCC---CHHHHhCC
Confidence 46678889999999999999999877 7888888877432 24444543
No 228
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.94 E-value=0.053 Score=52.40 Aligned_cols=24 Identities=38% Similarity=0.646 Sum_probs=20.8
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCC
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNY 270 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~ 270 (500)
-+++||+|+|||+++.||+-.||.
T Consensus 28 ~~i~G~NGsGKS~ileAi~~~lg~ 51 (427)
T d1w1wa_ 28 TSIIGPNGSGKSNMMDAISFVLGV 51 (427)
T ss_dssp EEEECSTTSSHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCHHHHHHHHHHHhCC
Confidence 379999999999999999876654
No 229
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=90.51 E-value=0.5 Score=43.16 Aligned_cols=60 Identities=17% Similarity=0.186 Sum_probs=34.0
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCC-EEEEeecccCChHHHHHHHHhhc-----CCeEEEecchhc
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYD-VYDLELTAVKDNTELRKLLIETT-----SKSIIVIEDIDC 306 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~-i~~l~l~~~~~~~~l~~l~~~~~-----~~~Il~iDdiD~ 306 (500)
+++.|++|+|||+++..++.....+ .+.+-..-.+...++..+..... .+++++.--.|.
T Consensus 70 ~~Ifg~~g~GKt~l~~~~~~~~~~~~~v~V~~~iGer~~Ev~e~~~~~~~~~~~~~tvvv~~tsd~ 135 (276)
T d1fx0a3 70 ELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADS 135 (276)
T ss_dssp CBEEESSSSSHHHHHHHHHHTCCTTTCEEEEEEESCCHHHHHHHHHHTGGGTGGGSEEEEEECTTS
T ss_pred EeeccCCCCChHHHHHHHHhhhcccCceeeeeeecchhHHHHHHHHhhccCCcceeeeecccccCc
Confidence 8999999999999997655543333 22222222233444544443332 456776655544
No 230
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=90.27 E-value=0.043 Score=43.98 Aligned_cols=17 Identities=29% Similarity=0.339 Sum_probs=14.5
Q ss_pred cceeeeCCCCCcHHHHH
Q 041423 245 RGYLLYGPPGTGKSTMI 261 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla 261 (500)
+.++|++|+|+|||..+
T Consensus 8 ~~~il~~~tGsGKT~~~ 24 (140)
T d1yksa1 8 MTTVLDFHPGAGKTRRF 24 (140)
T ss_dssp CEEEECCCTTSSTTTTH
T ss_pred CcEEEEcCCCCChhHHH
Confidence 46899999999999655
No 231
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.22 E-value=0.062 Score=46.19 Aligned_cols=19 Identities=42% Similarity=0.620 Sum_probs=17.5
Q ss_pred eeeeCCCCCcHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMA 265 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA 265 (500)
++|.|.+|+|||||+..+.
T Consensus 5 ivllG~~~vGKTsll~r~~ 23 (200)
T d1zcba2 5 ILLLGAGESGKSTFLKQMR 23 (200)
T ss_dssp EEEECSTTSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHh
Confidence 7899999999999999883
No 232
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=90.18 E-value=0.1 Score=45.63 Aligned_cols=31 Identities=23% Similarity=0.195 Sum_probs=25.2
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCCCEEEEe
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNYDVYDLE 276 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~~i~~l~ 276 (500)
..+|.+|+|+|||.++-+++..++.++..+-
T Consensus 87 ~~ll~~~tG~GKT~~a~~~~~~~~~~~Liv~ 117 (206)
T d2fz4a1 87 RGCIVLPTGSGKTHVAMAAINELSTPTLIVV 117 (206)
T ss_dssp EEEEEESSSTTHHHHHHHHHHHSCSCEEEEE
T ss_pred CcEEEeCCCCCceehHHhHHHHhcCceeEEE
Confidence 3467899999999999999998887765543
No 233
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.01 E-value=0.078 Score=45.17 Aligned_cols=22 Identities=23% Similarity=0.282 Sum_probs=19.5
Q ss_pred ceeeeCCCCCcHHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~ 267 (500)
-+++.|++|+|||+|+..+.+.
T Consensus 7 ki~vlG~~~vGKTsLi~~~~~~ 28 (175)
T d2bmja1 7 RLGVLGDARSGKSSLIHRFLTG 28 (175)
T ss_dssp EEEEECCTTTTHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 4789999999999999988763
No 234
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=89.56 E-value=0.94 Score=40.99 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=26.8
Q ss_pred cccceeeeCCCCCcHHHHHHHHHH---HhCCCEEEEeeccc
Q 041423 243 WKRGYLLYGPPGTGKSTMIAAMAN---LLNYDVYDLELTAV 280 (500)
Q Consensus 243 ~~rg~LL~GPpGtGKTsla~aiA~---~l~~~i~~l~l~~~ 280 (500)
.+-.-||+|..|||||-++-..+. .-|..+..+-.+.+
T Consensus 103 ~~m~rLL~GdvGSGKT~Va~~a~~~~~~~g~q~~~m~Pt~~ 143 (264)
T d1gm5a3 103 KPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVPTSI 143 (264)
T ss_dssp SCCCCEEECCSSSSHHHHHHHHHHHHHHHTSCEEEECSCHH
T ss_pred CcceeeeeccccccccHHHHHHHHHHHhcccceeEEeehHh
Confidence 445689999999999988765443 33777666655544
No 235
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=89.47 E-value=0.45 Score=38.78 Aligned_cols=61 Identities=13% Similarity=0.261 Sum_probs=38.0
Q ss_pred eeeeCCCCCcHHH-HHHHHHH--HhCCCEEEEeeccc--------------------CChHHHHHHHHhh---cCCeEEE
Q 041423 247 YLLYGPPGTGKST-MIAAMAN--LLNYDVYDLELTAV--------------------KDNTELRKLLIET---TSKSIIV 300 (500)
Q Consensus 247 ~LL~GPpGtGKTs-la~aiA~--~l~~~i~~l~l~~~--------------------~~~~~l~~l~~~~---~~~~Il~ 300 (500)
-+++||-.+|||+ |++.+-+ ..+.++..+....- ....++...+... ...-+|+
T Consensus 5 ~~i~GpMfsGKTteLi~~~~~~~~~~~kv~~ikp~~D~R~~~~i~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~dvI~ 84 (139)
T d2b8ta1 5 EFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKIDTRSIRNIQSRTGTSLPSVEVESAPEILNYIMSNSFNDETKVIG 84 (139)
T ss_dssp EEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECCCGGGCSSCCCCCCCSSCCEEESSTHHHHHHHHSTTSCTTCCEEE
T ss_pred EEEEccccCHHHHHHHHHHHHHHHCCCcEEEEEEcccccccceEEcccCceeeeEEeccchhhHHHHHhhccccCcCEEE
Confidence 3689999999998 7777644 34777766643311 1223333333322 2457999
Q ss_pred ecchhch
Q 041423 301 IEDIDCS 307 (500)
Q Consensus 301 iDdiD~~ 307 (500)
|||+..+
T Consensus 85 IDE~QFf 91 (139)
T d2b8ta1 85 IDEVQFF 91 (139)
T ss_dssp ECSGGGS
T ss_pred echhhhc
Confidence 9999874
No 236
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=88.80 E-value=0.091 Score=46.54 Aligned_cols=21 Identities=38% Similarity=0.531 Sum_probs=18.6
Q ss_pred ceeeeCCCCCcHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~ 266 (500)
-+||.|++|+|||||++.+..
T Consensus 8 KilllG~~~vGKTsll~~~~~ 28 (221)
T d1azta2 8 RLLLLGAGESGKSTIVKQMRI 28 (221)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 489999999999999998754
No 237
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=88.56 E-value=0.15 Score=44.16 Aligned_cols=33 Identities=18% Similarity=0.342 Sum_probs=26.8
Q ss_pred cceeeeCC-CCCcHHHHHHHHHHHh---CCCEEEEee
Q 041423 245 RGYLLYGP-PGTGKSTMIAAMANLL---NYDVYDLEL 277 (500)
Q Consensus 245 rg~LL~GP-pGtGKTsla~aiA~~l---~~~i~~l~l 277 (500)
+-|++.|- +|+|||+++..||..| |+.+..++.
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~ 38 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP 38 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence 35889998 5999999999999866 777777654
No 238
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.52 E-value=0.12 Score=43.98 Aligned_cols=22 Identities=41% Similarity=0.545 Sum_probs=19.4
Q ss_pred ceeeeCCCCCcHHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~ 267 (500)
-++|.|.+|+|||||+..+...
T Consensus 4 Kiv~lG~~~vGKTsll~r~~~~ 25 (200)
T d2bcjq2 4 KLLLLGTGESGKSTFIKQMRII 25 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3789999999999999998764
No 239
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=87.36 E-value=0.12 Score=48.89 Aligned_cols=24 Identities=38% Similarity=0.268 Sum_probs=21.8
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCC
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNY 270 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~ 270 (500)
+.|-|+-|+||||+++.|+++++.
T Consensus 9 I~iEG~iGsGKSTl~~~L~~~l~~ 32 (333)
T d1p6xa_ 9 IYLDGVYGIGKSTTGRVMASAASG 32 (333)
T ss_dssp EEEECSTTSSHHHHHHHHHSGGGC
T ss_pred EEEECCccCCHHHHHHHHHHHhcc
Confidence 668899999999999999999864
No 240
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=87.28 E-value=0.097 Score=46.54 Aligned_cols=22 Identities=36% Similarity=0.439 Sum_probs=19.4
Q ss_pred ceeeeCCCCCcHHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~ 267 (500)
-+++.|..|+|||||++.+...
T Consensus 5 v~iitGFLGaGKTTll~~lL~~ 26 (222)
T d1nija1 5 VTLLTGFLGAGKTTLLRHILNE 26 (222)
T ss_dssp EEEEEESSSSSCHHHHHHHHHS
T ss_pred EEEEeeCCCCCHHHHHHHHHhc
Confidence 4789999999999999988775
No 241
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=86.11 E-value=0.31 Score=44.04 Aligned_cols=46 Identities=33% Similarity=0.338 Sum_probs=29.2
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHh---CCCEEEEeecccCChHHHHHHHHhh
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLL---NYDVYDLELTAVKDNTELRKLLIET 293 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l---~~~i~~l~l~~~~~~~~l~~l~~~~ 293 (500)
+-+++.|.=|+||||++..+|..+ |..+..+++... ..+..+|...
T Consensus 21 ~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~---~~l~~~lg~~ 69 (279)
T d1ihua2 21 GLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA---AHLSMTLNGS 69 (279)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC-------------
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC---CChHHHhCCc
Confidence 347788999999999988888765 788888888743 2344444433
No 242
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=86.11 E-value=0.22 Score=42.69 Aligned_cols=22 Identities=27% Similarity=0.457 Sum_probs=17.2
Q ss_pred cceeeeCCCCCcHHHHHHHHHH
Q 041423 245 RGYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~ 266 (500)
+..|+.+|.|+|||.++..++.
T Consensus 24 ~n~lv~~pTGsGKT~i~~~~~~ 45 (200)
T d1wp9a1 24 TNCLIVLPTGLGKTLIAMMIAE 45 (200)
T ss_dssp SCEEEECCTTSCHHHHHHHHHH
T ss_pred CCeEEEeCCCCcHHHHHHHHHH
Confidence 3688999999999986655553
No 243
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=85.26 E-value=0.16 Score=43.06 Aligned_cols=21 Identities=19% Similarity=0.404 Sum_probs=19.0
Q ss_pred ceeeeCCCCCcHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~ 266 (500)
.+-+.|.|++|||||+.++.+
T Consensus 7 nIaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 478999999999999999975
No 244
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=85.19 E-value=0.45 Score=42.40 Aligned_cols=39 Identities=23% Similarity=0.194 Sum_probs=26.4
Q ss_pred CcccceeeeCCCCCcHHHHHHHHHH-Hh--CCCEEEEeeccc
Q 041423 242 AWKRGYLLYGPPGTGKSTMIAAMAN-LL--NYDVYDLELTAV 280 (500)
Q Consensus 242 ~~~rg~LL~GPpGtGKTsla~aiA~-~l--~~~i~~l~l~~~ 280 (500)
+.+...||+|..|+|||-++-..+. .+ |..+..+-....
T Consensus 74 ~~~~~~LL~GdvGsGKT~V~~~a~~~~~~~g~qv~~l~Pt~~ 115 (233)
T d2eyqa3 74 PLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTL 115 (233)
T ss_dssp SSCCEEEEECCCCTTTHHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred cCccCeEEEcCCCCCcHHHHHHHHHHHHHcCCceEEEccHHH
Confidence 3445689999999999988764443 33 666666554443
No 245
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=84.42 E-value=0.93 Score=43.80 Aligned_cols=34 Identities=24% Similarity=0.284 Sum_probs=29.8
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecc
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTA 279 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~ 279 (500)
..+|.|-+|||||.++.+++..++.++..|.-+.
T Consensus 33 ~q~l~GltGS~ka~~iA~l~~~~~rp~LVVt~n~ 66 (413)
T d1t5la1 33 HQTLLGATGTGKTFTISNVIAQVNKPTLVIAHNK 66 (413)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHTCCEEEECSSH
T ss_pred cEEEeCCCCcHHHHHHHHHHHHhCCCEEEEeCCH
Confidence 4789999999999999999999999988776544
No 246
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=84.35 E-value=0.22 Score=42.02 Aligned_cols=20 Identities=40% Similarity=0.577 Sum_probs=18.0
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
++|.|..|+|||+|+..+..
T Consensus 5 ivllG~~~vGKTsl~~r~~~ 24 (195)
T d1svsa1 5 LLLLGAGESGKSTIVKQMKI 24 (195)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhh
Confidence 78999999999999998764
No 247
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=84.15 E-value=0.38 Score=46.53 Aligned_cols=22 Identities=27% Similarity=0.487 Sum_probs=20.0
Q ss_pred cceeeeCCCCCcHHHHHHHHHH
Q 041423 245 RGYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~ 266 (500)
-.+.+.|.||+|||||+.+|.+
T Consensus 57 l~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 57 LNVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp EEEEEEECTTSSHHHHHHHHHT
T ss_pred cEEEEECCCCCCHHHHHHHHhC
Confidence 4689999999999999999975
No 248
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=83.92 E-value=0.42 Score=43.00 Aligned_cols=35 Identities=23% Similarity=0.295 Sum_probs=28.4
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHh---CCCEEEEeeccc
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLL---NYDVYDLELTAV 280 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l---~~~i~~l~l~~~ 280 (500)
-+.++|.=|+||||++..+|..| |..+..+|+...
T Consensus 3 ~Iai~gKGGvGKTT~a~nLA~~LA~~G~rVllID~D~q 40 (269)
T d1cp2a_ 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK 40 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence 45678999999999998888765 778888888653
No 249
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=83.78 E-value=0.18 Score=47.69 Aligned_cols=25 Identities=24% Similarity=0.312 Sum_probs=22.1
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCC
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYD 271 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~ 271 (500)
+.|-|+-|+||||+++.++..++..
T Consensus 8 I~IEG~iGsGKSTl~~~L~~~l~~~ 32 (331)
T d1osna_ 8 IYLDGAYGIGKTTAAEEFLHHFAIT 32 (331)
T ss_dssp EEEEESSSSCTTHHHHHHHHTTTTS
T ss_pred EEEECCCCCCHHHHHHHHHHHHhhc
Confidence 5688999999999999999998653
No 250
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=83.51 E-value=0.27 Score=45.04 Aligned_cols=26 Identities=15% Similarity=0.092 Sum_probs=22.8
Q ss_pred ccceeeeCCCCCcHHHHHHHHHHHhC
Q 041423 244 KRGYLLYGPPGTGKSTMIAAMANLLN 269 (500)
Q Consensus 244 ~rg~LL~GPpGtGKTsla~aiA~~l~ 269 (500)
-|++.+.|..|+|||||+.+|....+
T Consensus 6 iRni~i~gh~~~GKTtL~e~ll~~~g 31 (276)
T d2bv3a2 6 LRNIGIAAHIDAGKTTTTERILYYTG 31 (276)
T ss_dssp EEEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred ceEEEEEeCCCCCHHHHHHHHHHhcC
Confidence 36899999999999999999987654
No 251
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=83.42 E-value=0.27 Score=44.84 Aligned_cols=25 Identities=32% Similarity=0.450 Sum_probs=21.7
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHhC
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLLN 269 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l~ 269 (500)
|++.+.|..|+|||||+.+|....+
T Consensus 3 RNv~iiGh~~~GKTtL~e~ll~~~g 27 (267)
T d2dy1a2 3 RTVALVGHAGSGKTTLTEALLYKTG 27 (267)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred eEEEEEcCCCCcHHHHHHHHHHHcC
Confidence 5788999999999999999976543
No 252
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=83.23 E-value=0.18 Score=47.17 Aligned_cols=17 Identities=35% Similarity=0.640 Sum_probs=14.9
Q ss_pred ceeeeCCCCCcHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIA 262 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~ 262 (500)
..||+|.+|||||||..
T Consensus 16 valffGLSGTGKTTLs~ 32 (318)
T d1j3ba1 16 VAVFFGLSGTGKTTLST 32 (318)
T ss_dssp EEEEEECTTSCHHHHTC
T ss_pred EEEEEccCCCCcccccc
Confidence 47999999999999874
No 253
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=80.89 E-value=0.28 Score=45.53 Aligned_cols=17 Identities=35% Similarity=0.640 Sum_probs=14.8
Q ss_pred ceeeeCCCCCcHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIA 262 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~ 262 (500)
.-||+|.+|||||||..
T Consensus 16 ~alfFGLSGTGKTTLs~ 32 (313)
T d2olra1 16 VAVFFGLSGTGKTTLST 32 (313)
T ss_dssp EEEEECSTTSSHHHHHC
T ss_pred EEEEEccCCCCccccee
Confidence 36899999999999873
No 254
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=80.69 E-value=0.31 Score=45.80 Aligned_cols=25 Identities=32% Similarity=0.470 Sum_probs=19.0
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCC
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYD 271 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~ 271 (500)
+.|-|+=|+||||+++.++..++..
T Consensus 7 I~IEG~iGsGKTTl~~~La~~l~~~ 31 (329)
T d1e2ka_ 7 VYIDGPHGMGKTTTTQLLVALGSRD 31 (329)
T ss_dssp EEECSCTTSSHHHHHHHHTC----C
T ss_pred EEEECCcCCCHHHHHHHHHHHhCCC
Confidence 5678999999999999999887543
No 255
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.12 E-value=0.54 Score=43.91 Aligned_cols=49 Identities=16% Similarity=0.356 Sum_probs=28.6
Q ss_pred ccccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHH
Q 041423 208 TFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMI 261 (500)
Q Consensus 208 ~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla 261 (500)
+|+.+.+++..-+++-+.+...+-. ..+. | +...++-||+.|+|||.++
T Consensus 45 ~FD~vf~~~~~q~~vf~~~~~~lv~-~~l~--G--~n~~i~aYGqtgSGKTyT~ 93 (323)
T d1bg2a_ 45 AFDRVFQSSTSQEQVYNDCAKKIVK-DVLE--G--YNGTIFAYGQTSSGKTHTM 93 (323)
T ss_dssp ECSEEECTTCCHHHHHHHHTHHHHH-HHHT--T--CCEEEEEECSTTSSHHHHH
T ss_pred ECCEEECCCCCHHHHHHHHHHHHHH-HHHc--C--CCcceeeecccCCCCceec
Confidence 4677766655555554444322211 1111 1 2335889999999999887
No 256
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=80.01 E-value=0.49 Score=41.64 Aligned_cols=22 Identities=18% Similarity=0.295 Sum_probs=20.0
Q ss_pred eeeeCCCCCcHHHHHHHHHHHh
Q 041423 247 YLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l 268 (500)
+.+.|.|++|||||+.+|.+..
T Consensus 8 IaIiGh~d~GKSTL~~~L~~~~ 29 (227)
T d1g7sa4 8 VSVLGHVDHGKTTLLDHIRGSA 29 (227)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEeCCCccHHHHHHHHHhhc
Confidence 8889999999999999998764
No 257
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=79.57 E-value=0.85 Score=39.53 Aligned_cols=33 Identities=30% Similarity=0.364 Sum_probs=25.9
Q ss_pred eeee-CCCCCcHHHHHHHHHHHh---CCCEEEEeecc
Q 041423 247 YLLY-GPPGTGKSTMIAAMANLL---NYDVYDLELTA 279 (500)
Q Consensus 247 ~LL~-GPpGtGKTsla~aiA~~l---~~~i~~l~l~~ 279 (500)
+.+. |-.|+||||++..+|..+ |..+..+++..
T Consensus 4 Iav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~ 40 (232)
T d1hyqa_ 4 ITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 40 (232)
T ss_dssp EEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3444 889999999999888766 77788887754
No 258
>d2axpa1 c.37.1.1 (A:2-165) Hypothetical protein YorR {Bacillus subtilis [TaxId: 1423]}
Probab=78.42 E-value=1.6 Score=33.33 Aligned_cols=58 Identities=21% Similarity=0.276 Sum_probs=43.5
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEEEeeccc--CChHHHHHHHHhhcCCeEEEecch
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAV--KDNTELRKLLIETTSKSIIVIEDI 304 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~--~~~~~l~~l~~~~~~~~Il~iDdi 304 (500)
++|.||--|=||+++.-+..++++|++.-+...+ ..+..|-.-|......--++||-+
T Consensus 3 iilegpdccfkstvaaklskelkypiikgssfelaksgneklfehfnkladednviidrf 62 (164)
T d2axpa1 3 IILEGPDCCFKSTVAAKLSKELKYPIIKGSSFELAKSGNEKLFEHFNKLADEDNVIIDRF 62 (164)
T ss_dssp EEEECCSSSCHHHHHHHHHHHHTCCEEECCCHHHHHHCHHHHHHHHHHHTTCCSEEEESC
T ss_pred EEEeCCchhhHHHHHHHHHhhhcCceecCchhhhhhccCHHHHHHHHhhccccceeeehh
Confidence 5788999999999999999999999876433333 356677777877776544555544
No 259
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=78.18 E-value=0.87 Score=41.32 Aligned_cols=35 Identities=26% Similarity=0.314 Sum_probs=27.0
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHh---CCCEEEEeeccc
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLL---NYDVYDLELTAV 280 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l---~~~i~~l~l~~~ 280 (500)
-+.++|.=|+||||++..+|..| |..+..+|+..-
T Consensus 4 ~IaisgKGGVGKTT~a~NLA~~LA~~G~rVLlID~DpQ 41 (289)
T d2afhe1 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDPK 41 (289)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 34568999999999887776644 888888888654
No 260
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=78.12 E-value=0.4 Score=44.70 Aligned_cols=17 Identities=41% Similarity=0.681 Sum_probs=14.9
Q ss_pred ceeeeCCCCCcHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIA 262 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~ 262 (500)
..||+|-+|||||||..
T Consensus 16 ~alfFGLSGTGKTTLs~ 32 (323)
T d1ii2a1 16 VTVFFGLSGTGKTTLSA 32 (323)
T ss_dssp EEEEECCTTSSHHHHHC
T ss_pred EEEEEccCCCCccccee
Confidence 36899999999999983
No 261
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=78.10 E-value=0.5 Score=47.69 Aligned_cols=33 Identities=21% Similarity=0.496 Sum_probs=22.2
Q ss_pred ceeeeCCCCCcHHHHH-HHHHHHh---CC---CEEEEeec
Q 041423 246 GYLLYGPPGTGKSTMI-AAMANLL---NY---DVYDLELT 278 (500)
Q Consensus 246 g~LL~GPpGtGKTsla-~aiA~~l---~~---~i~~l~l~ 278 (500)
.+|+.|.||||||+++ ..+|..+ +. .|..+..+
T Consensus 26 ~~lV~A~AGSGKT~~lv~ri~~ll~~~~~~p~~Il~ltft 65 (623)
T g1qhh.1 26 PLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFT 65 (623)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESS
T ss_pred CEEEEEeCchHHHHHHHHHHHHHHHcCCCCcccEEEEecc
Confidence 5888899999999766 4455443 21 36666654
No 262
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=78.08 E-value=0.8 Score=43.25 Aligned_cols=16 Identities=38% Similarity=0.669 Sum_probs=14.3
Q ss_pred ceeeeCCCCCcHHHHH
Q 041423 246 GYLLYGPPGTGKSTMI 261 (500)
Q Consensus 246 g~LL~GPpGtGKTsla 261 (500)
.++-||+.|+|||.++
T Consensus 82 ti~aYG~tgSGKT~Tm 97 (354)
T d1goja_ 82 TVFAYGQTGAGKSYTM 97 (354)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred eEEecccCCCCcceee
Confidence 5889999999999876
No 263
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=78.04 E-value=0.42 Score=42.21 Aligned_cols=22 Identities=27% Similarity=0.454 Sum_probs=17.3
Q ss_pred cceeeeCCCCCcHHHHHHHHHH
Q 041423 245 RGYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~ 266 (500)
+.+++.+|+|+|||..+-..+-
T Consensus 59 ~~~~i~apTGsGKT~~~~~~~~ 80 (237)
T d1gkub1 59 ESFAATAPTGVGKTSFGLAMSL 80 (237)
T ss_dssp CCEECCCCBTSCSHHHHHHHHH
T ss_pred CCEEEEecCCChHHHHHHHHHH
Confidence 4799999999999976554443
No 264
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=77.68 E-value=1.1 Score=38.86 Aligned_cols=33 Identities=27% Similarity=0.321 Sum_probs=25.9
Q ss_pred ceeee-CCCCCcHHHHHHHHHHHh---CCCEEEEeec
Q 041423 246 GYLLY-GPPGTGKSTMIAAMANLL---NYDVYDLELT 278 (500)
Q Consensus 246 g~LL~-GPpGtGKTsla~aiA~~l---~~~i~~l~l~ 278 (500)
-+.++ +-.|+||||++..+|..+ |.++..+++.
T Consensus 4 vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D 40 (237)
T d1g3qa_ 4 IISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp EEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 35556 668999999999988765 7788888765
No 265
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.63 E-value=0.28 Score=42.76 Aligned_cols=49 Identities=18% Similarity=0.173 Sum_probs=28.5
Q ss_pred ccccccCChhhHHHHHHHHHHHhhChHHHHhhCCC---cccceeeeCCCCCcHHH
Q 041423 208 TFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKA---WKRGYLLYGPPGTGKST 259 (500)
Q Consensus 208 ~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~---~~rg~LL~GPpGtGKTs 259 (500)
.|+++.+++++.+.|.+ . . +..+...+...+| -++.+++..|+|||||.
T Consensus 2 ~F~dl~L~~~l~~~l~~-~-g-~~~pt~iQ~~aip~il~g~dvl~~A~TGsGKTl 53 (207)
T d1t6na_ 2 GFRDFLLKPELLRAIVD-C-G-FEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 53 (207)
T ss_dssp CSTTSCCCHHHHHHHHH-T-T-CCCCCHHHHHHHHHHHTTCCEEEECCTTSCHHH
T ss_pred CccccCcCHHHHHHHHH-C-C-CCCCCHHHHHHHHHHHcCCCeEEEecccccccc
Confidence 47777777766665532 1 1 2222222222221 24679999999999985
No 266
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=75.59 E-value=3.1 Score=39.86 Aligned_cols=33 Identities=27% Similarity=0.299 Sum_probs=29.1
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeec
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNYDVYDLELT 278 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~ 278 (500)
..+|.|.+|+||+.++.+++..++.+++.|.-+
T Consensus 30 ~~~L~GlsgS~ka~~~A~l~~~~~rp~LvVt~~ 62 (408)
T d1c4oa1 30 FVTLLGATGTGKTVTMAKVIEALGRPALVLAPN 62 (408)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHTCCEEEEESS
T ss_pred cEEEecCCCCHHHHHHHHHHHHhCCCEEEEeCC
Confidence 478999999999999999999999998877543
No 267
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=75.35 E-value=0.96 Score=42.45 Aligned_cols=47 Identities=17% Similarity=0.460 Sum_probs=27.1
Q ss_pred cccccCChhhHHHHHHHHHHHhhChHHHHhhCCCcccceeeeCCCCCcHHHHH
Q 041423 209 FETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMI 261 (500)
Q Consensus 209 ~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~~~rg~LL~GPpGtGKTsla 261 (500)
|+.+.+++..-+++-+.+...+.. .+. | +.-.++-||..|+|||.++
T Consensus 54 FD~vf~~~~~q~~vy~~v~~~v~~--~l~--G--~n~~i~aYGqtgSGKT~T~ 100 (342)
T d1f9va_ 54 FDKIFDQQDTNVDVFKEVGQLVQS--SLD--G--YNVCIFAYGQTGSGKTFTM 100 (342)
T ss_dssp ESEEECTTCCHHHHHHHHHHHHGG--GGG--T--CCEEEEEECCTTSSHHHHH
T ss_pred cCeEeCCCCCHHHHHHHhhhhhcc--hhc--c--cccceeeeeccCCcccccc
Confidence 566665555555555544322211 111 1 2335788999999999887
No 268
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=75.10 E-value=0.7 Score=43.22 Aligned_cols=17 Identities=29% Similarity=0.651 Sum_probs=14.9
Q ss_pred ceeeeCCCCCcHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIA 262 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~ 262 (500)
.++-||..|||||.++.
T Consensus 87 ~i~aYGqTGSGKTyTm~ 103 (330)
T d1ry6a_ 87 SCFAYGQTGSGKTYTML 103 (330)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEeeeccccccceeee
Confidence 58899999999998874
No 269
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=74.82 E-value=0.75 Score=43.69 Aligned_cols=17 Identities=35% Similarity=0.608 Sum_probs=14.7
Q ss_pred cceeeeCCCCCcHHHHH
Q 041423 245 RGYLLYGPPGTGKSTMI 261 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla 261 (500)
..++-||+.|||||.++
T Consensus 76 ~~i~aYGqTGSGKTyTm 92 (364)
T d1sdma_ 76 VCIFAYGQTGSGKTFTI 92 (364)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eeeeccccCCCCccccc
Confidence 35889999999999875
No 270
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=74.47 E-value=0.57 Score=42.54 Aligned_cols=17 Identities=35% Similarity=0.425 Sum_probs=14.4
Q ss_pred cccceeeeCCCCCcHHH
Q 041423 243 WKRGYLLYGPPGTGKST 259 (500)
Q Consensus 243 ~~rg~LL~GPpGtGKTs 259 (500)
.++..++.+|+|+|||+
T Consensus 8 ~~~~~lv~~~TGsGKT~ 24 (305)
T d2bmfa2 8 KKRLTIMDLHPGAGKTK 24 (305)
T ss_dssp TTCEEEECCCTTSSTTT
T ss_pred cCCcEEEEECCCCCHHH
Confidence 34678999999999995
No 271
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=74.25 E-value=1.2 Score=40.16 Aligned_cols=21 Identities=43% Similarity=0.638 Sum_probs=19.4
Q ss_pred eeeeCCCCCcHHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~ 267 (500)
+++.|-|.+|||||+.++.+.
T Consensus 115 v~vvG~PNvGKSsliN~L~~~ 135 (273)
T d1puja_ 115 ALIIGIPNVGKSTLINRLAKK 135 (273)
T ss_dssp EEEEESTTSSHHHHHHHHHTS
T ss_pred EEEEecCccchhhhhhhhhcc
Confidence 789999999999999999874
No 272
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=73.27 E-value=0.83 Score=39.50 Aligned_cols=23 Identities=26% Similarity=0.289 Sum_probs=20.1
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHh
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l 268 (500)
++.+.|-+++|||||+.+|...+
T Consensus 5 ni~iiGhvd~GKSTL~~~Ll~~~ 27 (204)
T d2c78a3 5 NVGTIGHVDHGKTTLTAALTYVA 27 (204)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHHHh
Confidence 67889999999999999997554
No 273
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=72.47 E-value=0.32 Score=42.12 Aligned_cols=49 Identities=18% Similarity=0.135 Sum_probs=26.8
Q ss_pred ccccccCChhhHHHHHHHHHHHhhChHHHHhhCCC---cccceeeeCCCCCcHHH
Q 041423 208 TFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKA---WKRGYLLYGPPGTGKST 259 (500)
Q Consensus 208 ~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~---~~rg~LL~GPpGtGKTs 259 (500)
.|+++.+++...+.|.+ . .| ..+...+...++ -++.+++..|+|||||.
T Consensus 2 ~F~~l~L~~~l~~~l~~-~-g~-~~pt~iQ~~aip~~l~G~dvii~a~TGSGKTl 53 (209)
T d1q0ua_ 2 QFTRFPFQPFIIEAIKT-L-RF-YKPTEIQERIIPGALRGESMVGQSQTGTGKTH 53 (209)
T ss_dssp CGGGSCCCHHHHHHHHH-T-TC-CSCCHHHHHHHHHHHHTCCEEEECCSSHHHHH
T ss_pred ccccCCcCHHHHHHHHH-C-CC-CCCCHHHHHHHHHHHCCCCeEeecccccccce
Confidence 46677666666555532 1 11 112112221111 13569999999999996
No 274
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.30 E-value=0.38 Score=41.85 Aligned_cols=50 Identities=26% Similarity=0.199 Sum_probs=28.5
Q ss_pred CccccccCChhhHHHHHHHHHHHhhChHHHHhhCCC---cccceeeeCCCCCcHHH
Q 041423 207 ATFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKA---WKRGYLLYGPPGTGKST 259 (500)
Q Consensus 207 ~~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~---~~rg~LL~GPpGtGKTs 259 (500)
.+|+++.++++..+.|.+. . +..+...+...+| -++.+++..|+|||||.
T Consensus 3 ~~F~~l~L~~~l~~~l~~~--g-~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTl 55 (206)
T d1veca_ 3 NEFEDYCLKRELLMGIFEM--G-WEKPSPIQEESIPIALSGRDILARAKNGTGKSG 55 (206)
T ss_dssp SSGGGSCCCHHHHHHHHTT--T-CCSCCHHHHHHHHHHHTTCCEEEECCSSSTTHH
T ss_pred CChhccCcCHHHHHHHHHC--C-CCCCCHHHHHHHHHHHcCCCEEeeccCcccccc
Confidence 4677777776665555321 0 1222222222221 23579999999999995
No 275
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=72.00 E-value=1.2 Score=41.84 Aligned_cols=17 Identities=35% Similarity=0.612 Sum_probs=14.8
Q ss_pred cceeeeCCCCCcHHHHH
Q 041423 245 RGYLLYGPPGTGKSTMI 261 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla 261 (500)
..++-||+.|||||.++
T Consensus 82 ~~i~aYGqtgSGKTyTm 98 (345)
T d1x88a1 82 CTIFAYGQTGTGKTFTM 98 (345)
T ss_dssp EEEEEEECTTSSHHHHH
T ss_pred ceEEeeeeccccceEEe
Confidence 35889999999999876
No 276
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=71.95 E-value=0.9 Score=39.24 Aligned_cols=55 Identities=13% Similarity=-0.018 Sum_probs=30.7
Q ss_pred ccccccCChhhHHHHHHHHHHHhhChHHHHhhCCC----cccceeeeCCCCCcHHHHHHHHH
Q 041423 208 TFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKA----WKRGYLLYGPPGTGKSTMIAAMA 265 (500)
Q Consensus 208 ~~~~l~~~~~~k~~l~~~l~~~~~~~~~~~~~g~~----~~rg~LL~GPpGtGKTsla~aiA 265 (500)
+|+++.++++..+.+.+ . -+..+...+...++ -+..+++..|+|+|||...-..+
T Consensus 5 sf~~l~l~~~l~~~l~~-~--g~~~pt~iQ~~~ip~~l~g~~d~iv~a~TGsGKT~~~~l~~ 63 (208)
T d1hv8a1 5 NFNELNLSDNILNAIRN-K--GFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPL 63 (208)
T ss_dssp CGGGSSCCHHHHHHHHH-H--TCCSCCHHHHHHHHHHHHTCSEEEEECCSSSSHHHHHHHHH
T ss_pred CHHHcCCCHHHHHHHHH-C--CCCCCCHHHHHHHHHHHcCCCCeeeechhcccccceeeccc
Confidence 57777777766665532 1 12222222222221 12468899999999998664433
No 277
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.57 E-value=4.2 Score=32.28 Aligned_cols=32 Identities=22% Similarity=0.396 Sum_probs=21.0
Q ss_pred eeeeCCCCCcHHHHH-HHHHHH--hCCCEEEEeec
Q 041423 247 YLLYGPPGTGKSTMI-AAMANL--LNYDVYDLELT 278 (500)
Q Consensus 247 ~LL~GPpGtGKTsla-~aiA~~--l~~~i~~l~l~ 278 (500)
-+++||-.+|||+-. +.+-++ .+..+..+...
T Consensus 5 ~li~GpMfsGKTt~Li~~~~~~~~~g~~v~~ikp~ 39 (133)
T d1xbta1 5 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYA 39 (133)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHTTTCCEEEEEET
T ss_pred EEEEecccCHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 368899999999844 444332 36666665543
No 278
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=71.50 E-value=1.2 Score=42.15 Aligned_cols=16 Identities=31% Similarity=0.719 Sum_probs=14.4
Q ss_pred ceeeeCCCCCcHHHHH
Q 041423 246 GYLLYGPPGTGKSTMI 261 (500)
Q Consensus 246 g~LL~GPpGtGKTsla 261 (500)
.++-||..|||||.++
T Consensus 116 tifaYGqTGSGKTyTm 131 (362)
T d1v8ka_ 116 TCFAYGQTGSGKTHTM 131 (362)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred eEEeeccCCCCCceee
Confidence 5788999999999886
No 279
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=71.10 E-value=1.4 Score=41.77 Aligned_cols=17 Identities=29% Similarity=0.577 Sum_probs=14.7
Q ss_pred cceeeeCCCCCcHHHHH
Q 041423 245 RGYLLYGPPGTGKSTMI 261 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla 261 (500)
..++-||+.|||||.++
T Consensus 126 ~ti~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 126 ICIFAYGQTGSGKTYTM 142 (368)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eeEEeeccCCCccceEe
Confidence 35889999999999875
No 280
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=70.56 E-value=1.4 Score=34.68 Aligned_cols=22 Identities=9% Similarity=0.117 Sum_probs=19.4
Q ss_pred eeeeCCCCCcHHHHHHHHHHHh
Q 041423 247 YLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l 268 (500)
++|.|-+|+||++++.|+...|
T Consensus 9 i~~tg~~~~gk~~ia~al~~~l 30 (122)
T d1g8fa3 9 IVLGNSLTVSREQLSIALLSTF 30 (122)
T ss_dssp EEECTTCCSCHHHHHHHHHHHH
T ss_pred EEEeCCCCCCHHHHHHHHHHHH
Confidence 6888999999999999987655
No 281
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=69.24 E-value=1.1 Score=41.15 Aligned_cols=30 Identities=30% Similarity=0.448 Sum_probs=23.2
Q ss_pred eeeeCCCCCcHHHHHHHHHHH-----hCCCEEEEe
Q 041423 247 YLLYGPPGTGKSTMIAAMANL-----LNYDVYDLE 276 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~-----l~~~i~~l~ 276 (500)
+-|.|.|.+|||||..|+.+. -++|+.+++
T Consensus 13 iGivG~Pn~GKSTlfnalT~~~~~~~anypftTi~ 47 (296)
T d1ni3a1 13 TGIVGMPNVGKSTFFRAITKSVLGNPANYPYATID 47 (296)
T ss_dssp EEEEECSSSSHHHHHHHHHHSTTTSTTCCSSCCCC
T ss_pred EEEECCCCCCHHHHHHHHHCCCCCCcCCCCccCcc
Confidence 679999999999999999863 245555443
No 282
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=66.63 E-value=1.2 Score=37.68 Aligned_cols=31 Identities=23% Similarity=0.237 Sum_probs=23.6
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEEEeec
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYDLELT 278 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~ 278 (500)
+|+.|+.++|||.+|..+|...+ +++.+-.+
T Consensus 2 iLVtGGarSGKS~~AE~l~~~~~-~~~YiAT~ 32 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEALIGDAP-QVLYIATS 32 (180)
T ss_dssp EEEEECTTSSHHHHHHHHHCSCS-SEEEEECC
T ss_pred EEEECCCCccHHHHHHHHHhcCC-CcEEEEcc
Confidence 58899999999999999986654 44444433
No 283
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=66.08 E-value=1.5 Score=39.53 Aligned_cols=29 Identities=31% Similarity=0.513 Sum_probs=21.1
Q ss_pred eeeeCCCCCcHHHHHHHHHHH----hCCCEEEE
Q 041423 247 YLLYGPPGTGKSTMIAAMANL----LNYDVYDL 275 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~----l~~~i~~l 275 (500)
+-|.|-|.+|||||..++.+. -++|+.++
T Consensus 5 ~GivG~Pn~GKSTlf~~lt~~~~~~~~ypf~ti 37 (278)
T d1jala1 5 CGIVGLPNVGKSTLFNALTKAGIEAANYPFCTI 37 (278)
T ss_dssp EEEECCTTSSHHHHHHHHHHTC------CCCCC
T ss_pred EEEECCCCCCHHHHHHHHHCCCCccccCCCCCC
Confidence 668999999999999999863 24455444
No 284
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=65.39 E-value=1.3 Score=40.85 Aligned_cols=20 Identities=35% Similarity=0.453 Sum_probs=17.8
Q ss_pred eeeeCCCCCcHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~ 266 (500)
+-|.|-|.+|||||..++.+
T Consensus 3 v~lvG~pn~GKStlfn~lt~ 22 (319)
T d1wxqa1 3 IGVVGKPNVGKSTFFSAATL 22 (319)
T ss_dssp EEEEECTTSSHHHHHHHHHC
T ss_pred EeEECCCCCCHHHHHHHHHC
Confidence 46899999999999999954
No 285
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=64.66 E-value=2 Score=41.14 Aligned_cols=28 Identities=32% Similarity=0.363 Sum_probs=19.9
Q ss_pred CCcccceeeeCCCCCcHHHHH-HHHHHHh
Q 041423 241 KAWKRGYLLYGPPGTGKSTMI-AAMANLL 268 (500)
Q Consensus 241 ~~~~rg~LL~GPpGtGKTsla-~aiA~~l 268 (500)
.|.....|+.+.+|||||+++ .-++..+
T Consensus 13 ~p~~g~~lv~A~AGsGKT~~l~~r~~~ll 41 (485)
T d1w36b1 13 LPLQGERLIEASAGTGKTFTIAALYLRLL 41 (485)
T ss_dssp CCCSSCEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCeEEEEcCchHHHHHHHHHHHHHH
Confidence 344445788899999999754 5566655
No 286
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=64.58 E-value=3.7 Score=33.06 Aligned_cols=32 Identities=22% Similarity=0.487 Sum_probs=21.1
Q ss_pred cce--eeeCCCCCcHHH-HHHHHHH--HhCCCEEEEe
Q 041423 245 RGY--LLYGPPGTGKST-MIAAMAN--LLNYDVYDLE 276 (500)
Q Consensus 245 rg~--LL~GPpGtGKTs-la~aiA~--~l~~~i~~l~ 276 (500)
+|. ++.||-.+|||| |++.+-+ ..+.++..+.
T Consensus 6 ~G~l~lI~GpMfSGKTteLi~~~~~~~~~g~~vl~i~ 42 (141)
T d1xx6a1 6 HGWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFK 42 (141)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ceeEEEEEeccccHHHHHHHHHHHHhhhcCCcEEEEE
Confidence 453 688999999998 4444422 3466666554
No 287
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=64.50 E-value=1.4 Score=41.35 Aligned_cols=25 Identities=20% Similarity=0.260 Sum_probs=22.4
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHhC
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLLN 269 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l~ 269 (500)
|++.+.|..|+|||||+.+|....|
T Consensus 18 RNI~iiGhvd~GKTTL~d~Ll~~~g 42 (341)
T d1n0ua2 18 RNMSVIAHVDHGKSTLTDSLVQRAG 42 (341)
T ss_dssp EEEEEECCGGGTHHHHHHHHHHHHB
T ss_pred cEEEEEeCCCCcHHHHHHHHHHHCC
Confidence 6899999999999999999986665
No 288
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=59.30 E-value=2 Score=38.94 Aligned_cols=21 Identities=19% Similarity=0.371 Sum_probs=19.4
Q ss_pred ceeeeCCCCCcHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~ 266 (500)
-+.+.|.-++|||||+.||.+
T Consensus 28 ~ivvvG~~SsGKSsliNaLlg 48 (299)
T d2akab1 28 QIAVVGGQSAGKSSVLENFVG 48 (299)
T ss_dssp EEEEEEBTTSCHHHHHHHHHT
T ss_pred eEEEEcCCCCCHHHHHHHHhC
Confidence 378999999999999999987
No 289
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=58.95 E-value=1.8 Score=39.41 Aligned_cols=22 Identities=18% Similarity=0.424 Sum_probs=19.8
Q ss_pred ceeeeCCCCCcHHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~ 267 (500)
-+++.|..++|||||+.||.+.
T Consensus 26 ~ivVvG~~ssGKSSliNaLlG~ 47 (306)
T d1jwyb_ 26 QIVVVGSQSSGKSSVLENIVGR 47 (306)
T ss_dssp EEEEEECSSSSHHHHHHHHHTS
T ss_pred eEEEEeCCCCCHHHHHHHHhCC
Confidence 4789999999999999999973
No 290
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=57.20 E-value=3.4 Score=38.49 Aligned_cols=17 Identities=35% Similarity=0.581 Sum_probs=15.0
Q ss_pred cceeeeCCCCCcHHHHH
Q 041423 245 RGYLLYGPPGTGKSTMI 261 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla 261 (500)
..++-||+.|+|||.++
T Consensus 88 ~ti~aYGqTgSGKT~Tm 104 (349)
T d2zfia1 88 VCIFAYGQTGAGKSYTM 104 (349)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred ceeeeeccCCCCCceee
Confidence 46899999999999886
No 291
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=55.36 E-value=3 Score=35.24 Aligned_cols=19 Identities=37% Similarity=0.471 Sum_probs=15.6
Q ss_pred cceeeeCCCCCcHHHHHHH
Q 041423 245 RGYLLYGPPGTGKSTMIAA 263 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~a 263 (500)
+.+++.-|+|+|||.....
T Consensus 41 ~~vlv~apTGsGKT~~~~~ 59 (206)
T d1oywa2 41 RDCLVVMPTGGGKSLCYQI 59 (206)
T ss_dssp CCEEEECSCHHHHHHHHHH
T ss_pred CCEEEEcCCCCCCcchhhh
Confidence 4789999999999976543
No 292
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=54.89 E-value=2.6 Score=35.86 Aligned_cols=21 Identities=24% Similarity=0.396 Sum_probs=19.3
Q ss_pred ceeeeCCCCCcHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~ 266 (500)
++.+.|...+|||||+.+|.+
T Consensus 10 ni~iiGhVd~GKSTL~~~L~~ 30 (205)
T d2qn6a3 10 NIGVVGHVDHGKTTLVQAITG 30 (205)
T ss_dssp EEEEECSTTSSHHHHHHHHHS
T ss_pred EEEEEEccCCcHHHHHHHHHh
Confidence 688999999999999999975
No 293
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=54.02 E-value=6.7 Score=35.19 Aligned_cols=23 Identities=26% Similarity=0.355 Sum_probs=17.8
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHh
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l 268 (500)
..++.-|.|+|||.++.+++..+
T Consensus 130 ~~il~~pTGsGKT~i~~~i~~~~ 152 (282)
T d1rifa_ 130 RRILNLPTSAGRSLIQALLARYY 152 (282)
T ss_dssp EEEECCCTTSCHHHHHHHHHHHH
T ss_pred CceeEEEcccCccHHHHHHHHHh
Confidence 35667799999999888777543
No 294
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=52.61 E-value=3.5 Score=42.30 Aligned_cols=23 Identities=22% Similarity=0.446 Sum_probs=21.3
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHh
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l 268 (500)
.+++.|.+|+|||..++.|-++|
T Consensus 88 sIiisGeSGsGKTe~~k~il~yL 110 (684)
T d1lkxa_ 88 CVIISGESGAGKTEASKKIMQFL 110 (684)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHHH
Confidence 58999999999999999998877
No 295
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.01 E-value=2.2 Score=38.60 Aligned_cols=21 Identities=29% Similarity=0.324 Sum_probs=18.5
Q ss_pred eeeeCCCCCcHHHHHHHHHHH
Q 041423 247 YLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~ 267 (500)
+-+.||.+||||+|+..+++.
T Consensus 35 vsi~G~~~sGKS~llN~l~~~ 55 (277)
T d1f5na2 35 VAIVGLYRTGKSYLMNKLAGK 55 (277)
T ss_dssp EEEEEBTTSSHHHHHHHHTTC
T ss_pred EEEECCCCCCHHHHHHHHcCC
Confidence 568899999999999998864
No 296
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=51.58 E-value=3.7 Score=42.31 Aligned_cols=23 Identities=26% Similarity=0.466 Sum_probs=20.7
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHh
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l 268 (500)
.+++.|.+|+|||..++.+-+++
T Consensus 127 sIiisGeSGaGKTe~~k~il~yL 149 (712)
T d1d0xa2 127 SLLITGESGAGKTENTKKVIQYL 149 (712)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred eEEEeCCCCCCHHHHHHHHHHHH
Confidence 69999999999999998887776
No 297
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=50.93 E-value=4.9 Score=34.82 Aligned_cols=25 Identities=28% Similarity=0.385 Sum_probs=21.7
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCC
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNY 270 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~ 270 (500)
.+.+.|-..+|||||+.+|...++.
T Consensus 11 ~i~viGHVd~GKSTL~~~Ll~~~g~ 35 (222)
T d1zunb3 11 RFLTCGNVDDGKSTLIGRLLHDSKM 35 (222)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHTTC
T ss_pred eEEEEcCCCCCHHHHHHHHHHHcCC
Confidence 3788999999999999999877653
No 298
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=49.76 E-value=59 Score=25.97 Aligned_cols=40 Identities=15% Similarity=0.243 Sum_probs=25.4
Q ss_pred cHhHHHHHHhhhhhccCCCeEEEEEcCCcCcccHHHhcCCeeeEEEEcc
Q 041423 347 TLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELS 395 (500)
Q Consensus 347 ~ls~lL~~ldg~~~~~~~~~ivI~TTN~~~~lD~aLlr~GR~d~~I~~~ 395 (500)
+...++..++. ++++.=||+|-++ .++.|+. +-|..-+|.
T Consensus 113 ~~~~v~~ll~~----rp~~~evVlTGr~---~p~~L~e--~ADlVTEm~ 152 (157)
T d1g5ta_ 113 PLEEVISALNA----RPGHQTVIITGRG---CHRDILD--LADTVSELR 152 (157)
T ss_dssp CHHHHHHHHHT----SCTTCEEEEECSS---CCHHHHH--HCSEEEECC
T ss_pred CHHHHHHHHHh----CCCCCEEEEECCC---CCHHHHH--hcceeeeee
Confidence 34455555542 4566788999876 3567777 777766654
No 299
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=49.49 E-value=16 Score=31.02 Aligned_cols=24 Identities=25% Similarity=0.145 Sum_probs=19.4
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHh
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l 268 (500)
.|.+|-=++|+|||..+-+++..+
T Consensus 32 ~g~iLaDe~GlGKT~~~i~~~~~~ 55 (230)
T d1z63a1 32 FGICLADDMGLGKTLQTIAVFSDA 55 (230)
T ss_dssp CCEEECCCTTSCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCChHHHHHHhhhhh
Confidence 478888899999999887776654
No 300
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=49.14 E-value=4.2 Score=41.84 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=21.0
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHh
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l 268 (500)
.+++.|.+|+|||..++.|-++|
T Consensus 93 ~IiisGeSGaGKTe~~k~il~yL 115 (710)
T d1br2a2 93 SILCTGESGAGKTENTKKVIQYL 115 (710)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHH
Confidence 59999999999999999888876
No 301
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=49.09 E-value=5.1 Score=33.97 Aligned_cols=23 Identities=26% Similarity=0.319 Sum_probs=20.0
Q ss_pred cceeeeCCCCCcHHHHHHHHHHH
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANL 267 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~ 267 (500)
-++.+.|-++.|||||+.+|.+.
T Consensus 4 ini~iiGHvd~GKSTL~~~l~~~ 26 (196)
T d1d2ea3 4 VNVGTIGHVDHGKTTLTAAITKI 26 (196)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHH
T ss_pred cEEEEEeCCCCcHHHHHHHHHHH
Confidence 36789999999999999999764
No 302
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=47.88 E-value=4.1 Score=42.47 Aligned_cols=23 Identities=22% Similarity=0.426 Sum_probs=20.4
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHh
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l 268 (500)
.+++.|.+|+|||..++.|-++|
T Consensus 125 sIiisGeSGaGKTe~~K~il~yL 147 (794)
T d2mysa2 125 SILITGESGAGKTVNTKRVIQYF 147 (794)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHHH
Confidence 59999999999999888877766
No 303
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=47.63 E-value=6.8 Score=36.47 Aligned_cols=29 Identities=17% Similarity=0.105 Sum_probs=19.8
Q ss_pred CCceEEEEeeecCCcCCccHHHHHHHHHhccc
Q 041423 51 YPYIKISIHEFTGDRLKRSEAYAAVEAYLSVN 82 (500)
Q Consensus 51 ~~~~ti~i~E~~~~~~~~ne~Y~~~~~yLs~~ 82 (500)
.+.+|+++=+ +|--...+.+|+..-|+..
T Consensus 24 ~~~l~~i~G~---NGsGKS~ileAi~~~lg~~ 52 (427)
T d1w1wa_ 24 ESNFTSIIGP---NGSGKSNMMDAISFVLGVR 52 (427)
T ss_dssp TCSEEEEECS---TTSSHHHHHHHHHHHTTC-
T ss_pred CCCEEEEECC---CCCCHHHHHHHHHHHhCCC
Confidence 4678887744 4455788999998666543
No 304
>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=46.93 E-value=14 Score=28.04 Aligned_cols=47 Identities=21% Similarity=0.210 Sum_probs=39.3
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEEEeeccc-CChHHHHHHHHhh
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAV-KDNTELRKLLIET 293 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~-~~~~~l~~l~~~~ 293 (500)
|.|||-|+|+|+-=|..+-..-|.++-.+++..- -+..+|..++...
T Consensus 2 ~~iY~~p~Cs~srka~~~L~~~~i~~~~idy~k~pls~~eL~~ll~~~ 49 (114)
T d1rw1a_ 2 YVLYGIKACDTMKKARTWLDEHKVAYDFHDYKAVGIDREHLRRWCAEH 49 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCEEEEEHHHHCCCHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHcCCCeEEEEccccCCCHHHHHHHHHhc
Confidence 7899999999999999999999999888877653 3667788887654
No 305
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=46.75 E-value=4.4 Score=33.94 Aligned_cols=21 Identities=24% Similarity=0.355 Sum_probs=18.9
Q ss_pred ceeeeCCCCCcHHHHHHHHHH
Q 041423 246 GYLLYGPPGTGKSTMIAAMAN 266 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~ 266 (500)
++.+.|-+..|||||+.+|.+
T Consensus 7 nIaiiGhvd~GKSTL~~~L~g 27 (195)
T d1kk1a3 7 NIGMVGHVDHGKTTLTKALTG 27 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHT
T ss_pred EEEEEeccCCcHHHHHHHHHh
Confidence 578899999999999999965
No 306
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=46.58 E-value=4.8 Score=41.90 Aligned_cols=24 Identities=25% Similarity=0.421 Sum_probs=21.0
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHh
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l 268 (500)
-.+++.|.+|+|||..++.+-++|
T Consensus 122 Q~IiisGESGaGKTe~~K~il~yL 145 (789)
T d1kk8a2 122 QSCLITGESGAGKTENTKKVIMYL 145 (789)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHH
Confidence 358999999999999988888776
No 307
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=46.55 E-value=3.9 Score=35.83 Aligned_cols=23 Identities=26% Similarity=0.570 Sum_probs=17.4
Q ss_pred cceeeeCCCCCcHHH--HHHHHHHH
Q 041423 245 RGYLLYGPPGTGKST--MIAAMANL 267 (500)
Q Consensus 245 rg~LL~GPpGtGKTs--la~aiA~~ 267 (500)
+.+++..|+|||||. ++-.+-+.
T Consensus 59 ~dvvi~a~TGsGKTlayllp~l~~l 83 (238)
T d1wrba1 59 RDIMACAQTGSGKTAAFLIPIINHL 83 (238)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCcceeeHHHHHHHH
Confidence 579999999999997 44444443
No 308
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=45.65 E-value=6.4 Score=34.46 Aligned_cols=25 Identities=20% Similarity=0.187 Sum_probs=22.2
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCC
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNY 270 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~ 270 (500)
++.+.|-.+.|||||+.+|..++|.
T Consensus 8 Ni~iiGHvD~GKsTl~~~ll~~~g~ 32 (239)
T d1f60a3 8 NVVVIGHVDSGKSTTTGHLIYKCGG 32 (239)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHSC
T ss_pred EEEEEeCCCCCHHHHHHHHHHHcCC
Confidence 7889999999999999999877663
No 309
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=45.00 E-value=5.4 Score=41.15 Aligned_cols=24 Identities=17% Similarity=0.349 Sum_probs=21.3
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHh
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLL 268 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l 268 (500)
-.+++.|.+|+|||...+.+-++|
T Consensus 95 Q~IiisGeSGsGKTe~~k~il~~l 118 (730)
T d1w7ja2 95 QSIIVSGESGAGKTVSAKYAMRYF 118 (730)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHH
Confidence 369999999999999999888876
No 310
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=44.05 E-value=10 Score=32.94 Aligned_cols=48 Identities=13% Similarity=0.201 Sum_probs=31.2
Q ss_pred cCCeEEEecchhchhcccCcchhhhcccchHHHhhhhhhhhccCCCCCCcchhcHhHHHHHHhhhhhccCCCeEEEEEcC
Q 041423 294 TSKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTLSGLLNFIDGLWSACGGERLIVFTTN 373 (500)
Q Consensus 294 ~~~~Il~iDdiD~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~lL~~ldg~~~~~~~~~ivI~TTN 373 (500)
..+.|++|||++.-++ ......|++.+..+.. .+.-||+|||
T Consensus 224 ~~~~llllDEp~~~Ld-----------------------------------~~~~~~l~~~l~~~~~---~~~qviv~TH 265 (292)
T g1f2t.1 224 GEISLLILDEPTPYLD-----------------------------------EERRRKLITIMERYLK---KIPQVILVSH 265 (292)
T ss_dssp SSCSEEEEESCSCTTC-----------------------------------HHHHHHHHHHHHHTGG---GSSEEEEEES
T ss_pred CCCCEEEEeCCcccCC-----------------------------------HHHHHHHHHHHHHHHh---CCCEEEEEee
Confidence 4678999999987442 2244456666655532 2247888999
Q ss_pred CcCccc
Q 041423 374 YVEKLD 379 (500)
Q Consensus 374 ~~~~lD 379 (500)
.++-++
T Consensus 266 ~~~~~~ 271 (292)
T g1f2t.1 266 DEELKD 271 (292)
T ss_dssp CGGGGG
T ss_pred cHHHHH
Confidence 876554
No 311
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=43.21 E-value=15 Score=32.41 Aligned_cols=28 Identities=11% Similarity=0.131 Sum_probs=18.1
Q ss_pred cCCceEEEEeeecCCcCCccHHHHHHHHHhc
Q 041423 50 FYPYIKISIHEFTGDRLKRSEAYAAVEAYLS 80 (500)
Q Consensus 50 ~~~~~ti~i~E~~~~~~~~ne~Y~~~~~yLs 80 (500)
|++.+++.|=+ +|.-...+.+|+..-|+
T Consensus 22 f~~~lnvlvG~---NgsGKS~iL~Ai~~~lg 49 (308)
T d1e69a_ 22 FSDRVTAIVGP---NGSGKSNIIDAIKWVFG 49 (308)
T ss_dssp CCSSEEEEECC---TTTCSTHHHHHHHHTSC
T ss_pred CCCCeEEEECC---CCCcHHHHHHHHHHHhC
Confidence 45668888765 34446778888855444
No 312
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=42.11 E-value=6.9 Score=33.65 Aligned_cols=25 Identities=20% Similarity=0.262 Sum_probs=21.3
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHhC
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLLN 269 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l~ 269 (500)
-++.+.|--++|||||+.+|...+|
T Consensus 4 iNi~viGHVd~GKTTL~~~Ll~~~g 28 (224)
T d1jnya3 4 LNLIVIGHVDHGKSTLVGRLLMDRG 28 (224)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHHB
T ss_pred cEEEEEecCCCCHHHHHHHHHHHcC
Confidence 3678899999999999999976655
No 313
>d1sxjc1 a.80.1.1 (C:239-333) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=41.07 E-value=19 Score=26.07 Aligned_cols=44 Identities=18% Similarity=0.179 Sum_probs=33.8
Q ss_pred CCHHHHHHHHHHhhccccchhHHHHHHHhhcCCCCHHHHHHHhC
Q 041423 397 CTFQGFKVLAKNYLNVETHTLFETIQKLMEDTKITPADVAENLM 440 (500)
Q Consensus 397 p~~~~~~~l~~~~l~~~~~~l~~~i~~l~~~~~~spa~i~~~l~ 440 (500)
|.++...+|+...+...-......+..++.+.|+++.||...+-
T Consensus 1 P~P~~I~~il~~~l~~~f~~a~~~l~~l~~~~G~s~~dIl~~l~ 44 (95)
T d1sxjc1 1 PRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIV 44 (95)
T ss_dssp CCHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 67778888998888755455566677777788999999986554
No 314
>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}
Probab=40.99 E-value=17 Score=25.11 Aligned_cols=54 Identities=9% Similarity=0.100 Sum_probs=39.6
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecccCChHHHHHHHHhhc--CCeEEEecc
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETT--SKSIIVIED 303 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~~~~~~l~~l~~~~~--~~~Il~iDd 303 (500)
+.+|+-|||+--.-++.+....+.++-.+++.. +.+....+.... .-.+|++++
T Consensus 3 i~iYs~~~C~~C~~ak~~L~~~~i~y~~~~i~~---~~~~~~~~~~~g~~tvP~i~i~~ 58 (76)
T d1h75a_ 3 ITIYTRNDCVQCHATKRAMENRGFDFEMINVDR---VPEAAEALRAQGFRQLPVVIAGD 58 (76)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCCCEEEETTT---CHHHHHHHHHTTCCSSCEEEETT
T ss_pred EEEEeCCCCccHHHHHHHHHhcCceeEEEeecC---CHHHHHHHHhcCCCCCCEEEECC
Confidence 679999999999999999999999998888754 334444444333 224566666
No 315
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}
Probab=38.66 E-value=20 Score=24.42 Aligned_cols=54 Identities=11% Similarity=0.227 Sum_probs=39.3
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecccCChHHHHHHHHhhcC--CeEEEecc
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTS--KSIIVIED 303 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~~~~~~l~~l~~~~~~--~~Il~iDd 303 (500)
+.+|+-|||+-..-++.+....+.++-.+++.. +.+....+..... =.++++|+
T Consensus 3 v~iYt~~~C~~C~~ak~~L~~~~i~~~~~~i~~---~~~~~~~~~~~g~~tvP~i~i~g 58 (74)
T d1r7ha_ 3 ITLYTKPACVQCTATKKALDRAGLAYNTVDISL---DDEARDYVMALGYVQAPVVEVDG 58 (74)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCCCEEEETTT---CHHHHHHHHHTTCBCCCEEEETT
T ss_pred EEEEeCCCChhHHHHHHHHHHcCCceEEEEccC---CHHHHHHHHHhCCCCcCEEEECC
Confidence 679999999999999999999999998888764 2334444443332 23556665
No 316
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=38.15 E-value=23 Score=30.95 Aligned_cols=28 Identities=21% Similarity=0.157 Sum_probs=17.3
Q ss_pred cCCceEEEEeeecCCcCCccHHHHHHHHHhc
Q 041423 50 FYPYIKISIHEFTGDRLKRSEAYAAVEAYLS 80 (500)
Q Consensus 50 ~~~~~ti~i~E~~~~~~~~ne~Y~~~~~yLs 80 (500)
|++-+++.+-+ +|.....+.+|+..-|.
T Consensus 21 ~~~~~~vi~G~---NgsGKTtileAI~~~l~ 48 (369)
T g1ii8.1 21 FKEGINLIIGQ---NGSGKSSLLDAILVGLY 48 (369)
T ss_dssp CCSEEEEEECC---TTSSHHHHHHHHHHHHH
T ss_pred cCCCeEEEECC---CCCCHHHHHHHHHHHHc
Confidence 34556766544 34456778998865554
No 317
>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli, Grx3 [TaxId: 562]}
Probab=33.84 E-value=49 Score=22.74 Aligned_cols=35 Identities=9% Similarity=0.028 Sum_probs=31.1
Q ss_pred ceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeeccc
Q 041423 246 GYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAV 280 (500)
Q Consensus 246 g~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~ 280 (500)
.+-+|+-|+|+=..-|+.+....+.++..+++..-
T Consensus 2 ~I~iys~~~Cp~C~~ak~~L~~~~i~y~~~di~~~ 36 (82)
T d1fova_ 2 NVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGN 36 (82)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHTCCCEEEECTTC
T ss_pred cEEEEeCCCCHhHHHHHHHHHHcCCCeEEEeccch
Confidence 36789999999999999999999999999888753
No 318
>d1fada_ a.77.1.2 (A:) FADD (Mort1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.22 E-value=45 Score=23.82 Aligned_cols=59 Identities=15% Similarity=0.099 Sum_probs=39.5
Q ss_pred HHHHHHhhcCCCCHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 041423 419 ETIQKLMEDTKITPADVAENLMPKSPSDNVEKCLSSLIQALKEGKEEAERKQAEEERKQA 478 (500)
Q Consensus 419 ~~i~~l~~~~~~spa~i~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 478 (500)
.+...+....|++..+|...-.. ...+..+.|.+.|..|.++.........+..+++..
T Consensus 22 ~~Wk~Lar~Lgls~~~I~~I~~~-~~~~~~e~~~~mL~~W~~~~g~~at~~~L~~aL~~~ 80 (95)
T d1fada_ 22 RDWKRLARELKVSEAKMDGIEEK-YPRSLSERVRESLKVWKNAEKKNASVAGLVKALRTC 80 (95)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHH-CSSCHHHHHHHHHHHHHHHHGGGGSHHHHHHHHHHH
T ss_pred HhHHHHHHHcCCCHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHc
Confidence 45677777789999999775543 123346778888888876654444556666666654
No 319
>d1nm3a1 c.47.1.1 (A:166-239) C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus influenzae [TaxId: 727]}
Probab=32.19 E-value=42 Score=22.65 Aligned_cols=58 Identities=10% Similarity=0.082 Sum_probs=40.9
Q ss_pred cceeeeCCCCCcHHHHHHHHHHHhCCCEEEEeecccCChHHHHHHHHhhcCCeEEEecc
Q 041423 245 RGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIED 303 (500)
Q Consensus 245 rg~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~~~~~~l~~l~~~~~~~~Il~iDd 303 (500)
..+.+|+-|||+=..-|+.+....+.++..+++..-.....+.+.... ..=..|++|+
T Consensus 5 ~~I~iYs~~~C~~C~~ak~lL~~~~i~~~~~~v~~~~~~~~~~~~~~~-~tvP~i~i~g 62 (74)
T d1nm3a1 5 ESISIFTKPGCPFCAKAKQLLHDKGLSFEEIILGHDATIVSVRAVSGR-TTVPQVFIGG 62 (74)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHTCCCEEEETTTTCCHHHHHHHTCC-SSSCEEEETT
T ss_pred CcEEEEECCCCHHHHHHHHHHHHcCCCeEEEEccCcHHHHHHHHHhCC-ccCCEEEECC
Confidence 358899999999999999999999999999888665443333322111 1223456665
No 320
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=31.89 E-value=8.6 Score=33.65 Aligned_cols=26 Identities=23% Similarity=0.259 Sum_probs=21.6
Q ss_pred ccceeeeCCCCCcHHHHHHHHHHHhC
Q 041423 244 KRGYLLYGPPGTGKSTMIAAMANLLN 269 (500)
Q Consensus 244 ~rg~LL~GPpGtGKTsla~aiA~~l~ 269 (500)
..++.+.|-.+.|||||+.+|...+|
T Consensus 24 ~iNi~iiGHVD~GKSTL~~~Ll~~~g 49 (245)
T d1r5ba3 24 HVNIVFIGHVDAGKSTLGGNILFLTG 49 (245)
T ss_dssp EEEEEEEECGGGTHHHHHHHHHHHTT
T ss_pred ceEEEEEeeCCCCHHHHHHHHHHHcC
Confidence 34688889999999999999976554
No 321
>d1qzma_ c.37.1.20 (A:) ATPase domain of protease Lon (La) {Escherichia coli [TaxId: 562]}
Probab=30.92 E-value=39 Score=24.52 Aligned_cols=53 Identities=17% Similarity=0.169 Sum_probs=32.0
Q ss_pred CCCHHHHHHHHHHhhccccchhHHHHHHHhhcCCCCHHH----------HHHHhCCCCCCCcHHHHHHHHHHH
Q 041423 396 YCTFQGFKVLAKNYLNVETHTLFETIQKLMEDTKITPAD----------VAENLMPKSPSDNVEKCLSSLIQA 458 (500)
Q Consensus 396 ~p~~~~~~~l~~~~l~~~~~~l~~~i~~l~~~~~~spa~----------i~~~l~~~~~~~~~~~~~~~l~~~ 458 (500)
-.+.++...|+++|| +.+++++.++++.+ |.+.....++.+..+.+++.++..
T Consensus 2 GYt~~EK~~Iak~yL----------iPk~l~~~gl~~~~i~i~~~~l~~iI~~YtrEaGVR~Ler~i~~I~Rk 64 (94)
T d1qzma_ 2 GYTEDEKLNIAKRHL----------LPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRK 64 (94)
T ss_dssp CCCHHHHHHHHHHTH----------HHHHHHHTTCCTTTEEECHHHHHHHHHHHCCCSSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh----------HHHHHHHhccccccccchHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 357889999999999 66677766665433 223333334455555555554443
No 322
>d1kjwa2 c.37.1.1 (A:526-724) Guanylate kinase-like domain of Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=28.64 E-value=21 Score=29.73 Aligned_cols=27 Identities=15% Similarity=0.272 Sum_probs=21.7
Q ss_pred CcccceeeeCCCCCcHHHHHHHHHHHhCCC
Q 041423 242 AWKRGYLLYGPPGTGKSTMIAAMANLLNYD 271 (500)
Q Consensus 242 ~~~rg~LL~GPpGtGKTsla~aiA~~l~~~ 271 (500)
..+|.++|.|| ||+++.+.|.....-.
T Consensus 7 ~~~Rpivi~Gp---~K~ti~~~L~~~~p~~ 33 (199)
T d1kjwa2 7 HYARPIIILGP---TKDRANDDLLSEFPDK 33 (199)
T ss_dssp CSCCCEEEEST---THHHHHHHHHHHCTTT
T ss_pred CCCCCEEEECc---CHHHHHHHHHHhCccc
Confidence 35678999998 5999999999976443
No 323
>d1t0hb_ c.37.1.1 (B:) Guanylate kinase-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=28.17 E-value=1.1e+02 Score=25.18 Aligned_cols=109 Identities=13% Similarity=0.152 Sum_probs=65.7
Q ss_pred hcHhHHHHHHhhhhhccCCCeEEEE---EcCCcCcccHHHhcCCeeeEEEEccCCCHHHHHHHHHHhhccccchhHHHHH
Q 041423 346 VTLSGLLNFIDGLWSACGGERLIVF---TTNYVEKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNYLNVETHTLFETIQ 422 (500)
Q Consensus 346 ~~ls~lL~~ldg~~~~~~~~~ivI~---TTN~~~~lD~aLlr~GR~d~~I~~~~p~~~~~~~l~~~~l~~~~~~l~~~i~ 422 (500)
..+.+..+.++.+...+..-.++|. |-|||..|-..-+-| ..+++..-+..-...|+++.-......+..+..
T Consensus 88 ~~~~eVq~eIErIfelar~lqLvvLD~dtInhP~ql~ktsLaP----Iivyikiss~kVLqrLIKsrGksq~k~~nvq~v 163 (219)
T d1t0hb_ 88 SSLAEVQSEIERIFELARTLQLVVLDADTINHPAQLSKTSLAP----IIVYVKISSPKVLQRLIKSRGKSQAKHLNVQMV 163 (219)
T ss_dssp SCHHHHHHHHHHHHHHHTTCCEEEEEETTCCSGGGTTTSSCCC----EEEEECCSCHHHHHHHHHHC------CHHHHHH
T ss_pred chHHHHHHHHHHHHHHhhcccEEEeccCccCCHHHhcccCCcc----eEEEEEeCcHHHHHHHHHhcChhhhhcccHHHH
Confidence 4567778888887666655556666 668888877655543 557888888888888888765444334443333
Q ss_pred HHhhcCCCCHHHHHHHhCCCCCCCcHHHHHHHHHHHHHH
Q 041423 423 KLMEDTKITPADVAENLMPKSPSDNVEKCLSSLIQALKE 461 (500)
Q Consensus 423 ~l~~~~~~spa~i~~~l~~~~~~~~~~~~~~~l~~~l~~ 461 (500)
+.-+-....|.|.-+..+. ....+.|.+.+.+.++.
T Consensus 164 aa~kl~Qc~p~e~fD~iLd---en~Le~Acehla~yLE~ 199 (219)
T d1t0hb_ 164 AADKLAQCPPQESFDVILD---ENQLEDACEHLADYLEA 199 (219)
T ss_dssp HHHHHHTSCHHHHCSEEEC---CSSHHHHHHHHHHHHHH
T ss_pred HHHHHhccCchhccceeec---ccchHHHHHHHHHHHHH
Confidence 3333336777776666663 33445555666666653
No 324
>d1o5za2 c.72.2.2 (A:-2-293) Folylpolyglutamate synthetase {Thermotoga maritima [TaxId: 2336]}
Probab=27.78 E-value=16 Score=32.64 Aligned_cols=37 Identities=27% Similarity=0.455 Sum_probs=22.2
Q ss_pred HhhCCCcccceeeeCCCCC-cHHHHHHHHHHHh---CCCEEE
Q 041423 237 ARIGKAWKRGYLLYGPPGT-GKSTMIAAMANLL---NYDVYD 274 (500)
Q Consensus 237 ~~~g~~~~rg~LL~GPpGt-GKTsla~aiA~~l---~~~i~~ 274 (500)
..+|-|.. .+=+.|-.|| ||||++..++..| |.....
T Consensus 34 ~~lg~P~~-~lkvI~VTGTNGKTSt~~~i~~IL~~~g~~~g~ 74 (296)
T d1o5za2 34 SKLGNPHL-EYKTIHIGGTNGKGSVANMVSNILVSQGYRVGS 74 (296)
T ss_dssp HHTTCGGG-SSEEEEEECSSSHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHcCCchh-hCCEEEEEecCcHHHHHHHHHHHHHHcCCCcce
Confidence 34554433 2334455555 8999988887765 666544
No 325
>d1z3ea1 c.47.1.12 (A:1-114) Regulatory protein Spx {Bacillus subtilis [TaxId: 1423]}
Probab=24.63 E-value=79 Score=23.36 Aligned_cols=47 Identities=15% Similarity=0.147 Sum_probs=38.9
Q ss_pred eeeCCCCCcHHHHHHHHHHHhCCCEEEEeeccc-CChHHHHHHHHhhc
Q 041423 248 LLYGPPGTGKSTMIAAMANLLNYDVYDLELTAV-KDNTELRKLLIETT 294 (500)
Q Consensus 248 LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~-~~~~~l~~l~~~~~ 294 (500)
-|||-|+|+|+-=|.+....-|.++-.+++..- -+..+|..++....
T Consensus 3 ~ly~~~~C~~~rka~~~L~~~~i~~~~~d~~~~p~s~~eL~~ll~~~~ 50 (114)
T d1z3ea1 3 TLYTSPSCTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILRMTE 50 (114)
T ss_dssp EEEECTTCHHHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHHHHTCS
T ss_pred EEEcCCCCHHHHHHHHHHHHCCCCeEEEeeeccCCCHHHHHHHHHHhc
Confidence 489999999999999999999999888887654 36778888887644
No 326
>d1khba1 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.11 E-value=13 Score=34.33 Aligned_cols=19 Identities=21% Similarity=0.305 Sum_probs=14.8
Q ss_pred ceeeeC--CCCCcHHHHHHHH
Q 041423 246 GYLLYG--PPGTGKSTMIAAM 264 (500)
Q Consensus 246 g~LL~G--PpGtGKTsla~ai 264 (500)
-+.+.| |++||||.||-..
T Consensus 18 ~~yvaaAFPSaCGKTnlAMl~ 38 (363)
T d1khba1 18 KKYLAAAFPSACGKTNLAMMN 38 (363)
T ss_dssp EEEEEEECCTTSCHHHHHTCC
T ss_pred EEEEEEecCccccchhHHHhC
Confidence 356666 9999999998743
No 327
>d2gc6a2 c.72.2.2 (A:1-296) Folylpolyglutamate synthetase {Lactobacillus casei [TaxId: 1582]}
Probab=22.46 E-value=21 Score=31.72 Aligned_cols=26 Identities=31% Similarity=0.326 Sum_probs=17.1
Q ss_pred eeCCCCC-cHHHHHHHHHHHh---CCCEEE
Q 041423 249 LYGPPGT-GKSTMIAAMANLL---NYDVYD 274 (500)
Q Consensus 249 L~GPpGt-GKTsla~aiA~~l---~~~i~~ 274 (500)
+.|-.|| ||||++..++..| |+.+..
T Consensus 41 vI~VTGTNGKtST~~~i~~IL~~~G~kvG~ 70 (296)
T d2gc6a2 41 YIHVTGTNGKGSAANAIAHVLEASGLTVGL 70 (296)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEEeccCcHHHHHHHHHHHHHhcCCceee
Confidence 3344444 8999988887755 666544
No 328
>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.33 E-value=58 Score=20.67 Aligned_cols=42 Identities=12% Similarity=0.100 Sum_probs=28.6
Q ss_pred CHHHHHHHHHHhhccccchhHHHHHHHhhcCCCCHHHHHHHhC
Q 041423 398 TFQGFKVLAKNYLNVETHTLFETIQKLMEDTKITPADVAENLM 440 (500)
Q Consensus 398 ~~~~~~~l~~~~l~~~~~~l~~~i~~l~~~~~~spa~i~~~l~ 440 (500)
+.+++ .++..++.....+-..+...|+...|+++.+|...+.
T Consensus 5 s~~q~-~~Le~~F~~~~~P~~~~~~~LA~~lgl~~~qV~~WFq 46 (53)
T d1le8a_ 5 SPQAR-AFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFI 46 (53)
T ss_dssp CHHHH-HHHHHHHHHCSCCCHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred CHHHH-HHHHHHHHhCCCCCHHHHHHHHHHHCCCHHHHHHHHH
Confidence 34443 4455555556666677788888888999999876553
No 329
>d1j9ba_ c.47.1.12 (A:) Arsenate reductase ArsC {Escherichia coli [TaxId: 562]}
Probab=20.57 E-value=85 Score=24.14 Aligned_cols=48 Identities=19% Similarity=0.165 Sum_probs=39.0
Q ss_pred eeeeCCCCCcHHHHHHHHHHHhCCCEEEEeeccc-CChHHHHHHHHhhc
Q 041423 247 YLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAV-KDNTELRKLLIETT 294 (500)
Q Consensus 247 ~LL~GPpGtGKTsla~aiA~~l~~~i~~l~l~~~-~~~~~l~~l~~~~~ 294 (500)
+-|||-|+|.|+-=|..+....|.++-.++.-.- -+..+|..++....
T Consensus 2 i~iY~~p~Cs~srkal~~L~~~~i~~~~idy~k~pls~~eL~~ll~~lg 50 (138)
T d1j9ba_ 2 ITIYHNPACGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIADMG 50 (138)
T ss_dssp CEEECCTTCHHHHHHHHHHHHTTCCCEEECTTTSCCCHHHHHHHHHHHT
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCCeEEEeeccCCCCHHHHHHHHHHcc
Confidence 5799999999999999999999999888876553 36677888877654
Done!