BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 041424
         (148 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|326427340|gb|EGD72910.1| ubiquitin [Salpingoeca sp. ATCC 50818]
          Length = 220

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 23/138 (16%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAI---KVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDLF 117
           +EST+ L+F      K +++ V+ PSD I  +K KI          + K  +    + L 
Sbjct: 63  KESTLHLIFVKTLTGKTITLEVE-PSDSIENVKAKI----------QDKEGIPPDQQRLI 111

Query: 118 CTGMKLKDCKTLACYGVK 135
             G +L+D +TL+ Y ++
Sbjct: 112 FAGKQLEDGRTLSDYNIQ 129



 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 154 KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 205

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 206 KESTLHLVL 214


>gi|410976446|ref|XP_003994631.1| PREDICTED: polyubiquitin-B-like [Felis catus]
          Length = 229

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+KG + EKEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|350420431|ref|XP_003492506.1| PREDICTED: polyubiquitin-like [Bombus impatiens]
          Length = 471

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 36/154 (23%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD--- 115
           +EST+ L+        + ++  S  +L+L+  ++IFVK LT + + L+V+   TI +   
Sbjct: 367 KESTLHLV--------LRLRGGSHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 418

Query: 116 --------------LFCTGMKLKDCKTLACYGVK 135
                         L   G +L+D +TL+ Y ++
Sbjct: 419 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 452



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|348537407|ref|XP_003456186.1| PREDICTED: polyubiquitin-C-like [Oreochromis niloticus]
          Length = 237

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 86/163 (52%), Gaps = 37/163 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVL---------SISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKV 109
           +EST+ L+  A K L         +I  ++    +L+L+  ++IFVK LT + + L+V+ 
Sbjct: 63  KESTLHLVLFAGKQLEDGRTLSDYNIQKESTLHLVLRLRENMQIFVKTLTGKTITLEVEP 122

Query: 110 LLTIRD-----------------LFCTGMKLKDCKTLACYGVK 135
             TI +                 L   G +L+D +TL+ Y ++
Sbjct: 123 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 165


>gi|226473052|emb|CAX71212.1| polyubiquitin [Schistosoma japonicum]
          Length = 304

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 73/145 (50%), Gaps = 30/145 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+ C    + I VK            PSD I  +K KI          + K  +
Sbjct: 215 KESTLHLVLCFRGGMQIFVKTLTGKTITLEVEPSDPIENVKAKI----------QDKEGI 264

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGV 134
               + L   G +L+D +TL+ Y +
Sbjct: 265 PPDQQRLIFAGKQLEDGRTLSDYNI 289



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|307108562|gb|EFN56802.1| hypothetical protein CHLNCDRAFT_51574 [Chlorella variabilis]
          Length = 979

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 81  KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 133

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 134 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAK 175

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TLA Y ++ +
Sbjct: 176 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 210



 Score = 69.3 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 761 KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 813

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 814 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAK 855

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TLA Y ++ +
Sbjct: 856 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 890



 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 913 KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 965

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 966 ESTLHLVL 973



 Score = 58.5 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 7/66 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 233 KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 285

Query: 62  ESTMQL 67
           EST+ L
Sbjct: 286 ESTLHL 291



 Score = 53.1 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 75/186 (40%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKE-------------------------------GTSED 30
           KT+TL VE S+TI+N+K  + +KE                               G   D
Sbjct: 654 KTITLEVESSDTIENVKAKIQDKEDQTCLPVRIKLVWSLCRWYVLSTLPNPAAAAGIPPD 713

Query: 31  IQDLFFAGDRLMNGRLIDYEDMALASPNVKRESTMQLLFCAIKVLSISVKAPSDDILKLK 90
            Q L FAG +L +GR        LA  N+++EST+ L                  +L+L+
Sbjct: 714 QQRLIFAGKQLEDGR-------TLADYNIQKESTLHL------------------VLRLR 748

Query: 91  --VKIFVKMLTEEIVKLKVKVLLTIRD-----------------LFCTGMKLKDCKTLAC 131
             ++IFVK LT + + L+V+   TI +                 L   G +L+D +TLA 
Sbjct: 749 GGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 808

Query: 132 YGVKDD 137
           Y ++ +
Sbjct: 809 YNIQKE 814


>gi|339232974|ref|XP_003381604.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979565|gb|EFV62342.1| ubiquitin family protein [Trichinella spiralis]
          Length = 210

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+KG + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAG 38
           KT+TL VE S+TI+N+KG + +KEG   D Q L FAG
Sbjct: 163 KTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAG 199


>gi|226484025|emb|CAX79681.1| ubiquitin C [Schistosoma japonicum]
          Length = 229

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEGT  D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDKEGTPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 182

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGTPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|302143601|emb|CBI22354.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 30/134 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 648 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 700

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDLFCTGM 121
           EST+ L+                  L+  ++IFVK LT + + L+ +       L   G 
Sbjct: 701 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEQR-------LIFAGK 737

Query: 122 KLKDCKTLACYGVK 135
           +L+D +TLA Y ++
Sbjct: 738 QLEDGRTLADYNIQ 751



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 52  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 104

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 105 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 148

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 149 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 179



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 204 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 256

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 257 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 300

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 301 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 331



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 420 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 472

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 473 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 516

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 517 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 547



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 572 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 624

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 625 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 668

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 669 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 699


>gi|12849189|dbj|BAB28242.1| unnamed protein product [Mus musculus]
          Length = 305

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+F                 L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 139 KESTLHLVFR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 182

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|112983984|ref|NP_001036839.1| polyubiquitin [Bombyx mori]
 gi|4587236|dbj|BAA76676.1| polyubiquitin [Bombyx mori]
          Length = 913

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L NGR L DY        N++
Sbjct: 543 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLENGRTLSDY--------NIQ 594

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 595 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 638

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 639 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 670



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 695 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 746

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 747 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 790

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 791 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 822



 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L++ +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLENGRTLSDYNIQ 594



 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 847 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 898

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 899 KESTLHLVL 907


>gi|195587564|ref|XP_002083531.1| GD13314 [Drosophila simulans]
 gi|194195540|gb|EDX09116.1| GD13314 [Drosophila simulans]
          Length = 300

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+KG + +KEG   D Q L FAG +L  GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 25/116 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENV 254



 Score = 35.0 bits (79), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 22/31 (70%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQ 32
           KT+TL VE S+TI+N+K  + +KEG   D Q
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 269


>gi|2760345|gb|AAB95250.1| ubiquitin [Arabidopsis thaliana]
          Length = 304

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N++R
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQR 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 140 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 183

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 184 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290


>gi|440796241|gb|ELR17350.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
          Length = 220

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 21/137 (15%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAI---KVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDLFC 118
           EST+ L+F      K +++ V++ SD I  +K KI          + K  +    + L  
Sbjct: 64  ESTLHLIFVKTLTGKTITLEVES-SDTIENVKQKI----------QDKEGIPPDQQRLIF 112

Query: 119 TGMKLKDCKTLACYGVK 135
            G +L+D +TLA Y ++
Sbjct: 113 AGKQLEDGRTLADYNIQ 129



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 154 KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 206

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 207 ESTLHLVL 214


>gi|440791755|gb|ELR12993.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
 gi|440792103|gb|ELR13331.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
          Length = 220

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 21/137 (15%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 87  KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 139

Query: 62  ESTMQLLFCAI---KVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDLFC 118
           EST+ L+F      K +++ V++ SD I  +K KI          + K  +    + L  
Sbjct: 140 ESTLHLIFVKTLTGKTITLEVES-SDTIENVKQKI----------QDKEGIPPDQQRLIF 188

Query: 119 TGMKLKDCKTLACYGVK 135
            G +L+D +TLA Y ++
Sbjct: 189 AGKQLEDGRTLADYNIQ 205



 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 154 KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 206

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 207 ESTLHLVL 214


>gi|24640094|ref|NP_572306.1| CG11700 [Drosophila melanogaster]
 gi|7290696|gb|AAF46143.1| CG11700 [Drosophila melanogaster]
          Length = 301

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  +H+KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI+      
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIKHVKARI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 259 HDKDGIPPDHQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 30/148 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KE    + Q L F G  L NGR L DY        N++
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K +I  K   E I   + + 
Sbjct: 139 KESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDK---EGIPPDQQR- 194

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVKDD 137
                 L   G +L+D +TL+ Y ++ +
Sbjct: 195 ------LIFAGKQLEDGRTLSDYNIQKE 216



 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KE    + Q L F G  L NGR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTIYLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G  L++ +TL+ Y ++ +
Sbjct: 107 QDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKE 140


>gi|62083359|gb|AAX62404.1| polyubiquitin [Lysiphlebus testaceipes]
          Length = 538

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 51/172 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 391 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 442

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 443 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 486

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD---------RGVACFISD 146
                       L   G +L+D +TL+ Y ++ +         RG A  IS+
Sbjct: 487 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGALIISE 538



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 182

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 291 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 334

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 335 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 366



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L F G +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFVGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|242096698|ref|XP_002438839.1| hypothetical protein SORBIDRAFT_10g027030 [Sorghum bicolor]
 gi|241917062|gb|EER90206.1| hypothetical protein SORBIDRAFT_10g027030 [Sorghum bicolor]
          Length = 229

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 40/153 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 140 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 183

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVKDD 137
                    + L   G +L+D +TLA Y ++ D
Sbjct: 184 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKD 216



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           +ST+ L+ 
Sbjct: 216 DSTLHLVL 223


>gi|123718340|emb|CAL30085.1| polyubiquitin [Globodera pallida]
          Length = 154

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|33323472|gb|AAQ07453.1| ubiquitin [Musa acuminata AAA Group]
          Length = 381

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + LKV+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLKVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|296478548|tpg|DAA20663.1| TPA: ubiquitin C [Bos taurus]
          Length = 314

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+KG + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|42490818|gb|AAH66197.1| Ubiquitin B [Mus musculus]
          Length = 305

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+  +TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSVTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL  Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLPDYNIQ 138


>gi|302847323|ref|XP_002955196.1| polyubiquitin [Volvox carteri f. nagariensis]
 gi|300259488|gb|EFJ43715.1| polyubiquitin [Volvox carteri f. nagariensis]
          Length = 229

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|159486707|ref|XP_001701379.1| bi-ubiquitin, major isoform [Chlamydomonas reinhardtii]
 gi|158271681|gb|EDO97495.1| bi-ubiquitin, major isoform [Chlamydomonas reinhardtii]
          Length = 153

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|302851086|ref|XP_002957068.1| polyubiquitin [Volvox carteri f. nagariensis]
 gi|300257624|gb|EFJ41870.1| polyubiquitin [Volvox carteri f. nagariensis]
          Length = 153

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|9837284|gb|AAG00512.1|AF285161_1 polyubiquitin C [Mus musculus]
          Length = 734

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG S D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 291 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 334

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 335 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 366



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGISPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 391 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 442

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 443 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 486

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 487 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 518



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 543 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 594

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 595 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 638

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 639 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 670


>gi|302843878|ref|XP_002953480.1| polyubiquitin [Volvox carteri f. nagariensis]
 gi|300261239|gb|EFJ45453.1| polyubiquitin [Volvox carteri f. nagariensis]
          Length = 305

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQ 259

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290


>gi|395295|emb|CAA52290.1| polyubiquitin [Volvox carteri f. nagariensis]
          Length = 381

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQ 259

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|339232978|ref|XP_003381606.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979561|gb|EFV62340.1| ubiquitin family protein [Trichinella spiralis]
          Length = 315

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 56/177 (31%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+KG + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 77  KTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 128

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD--- 115
           +EST+ L                  +L+L+  ++IFVK LT + + L+V+   T+ +   
Sbjct: 129 KESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTVENVKG 170

Query: 116 --------------LFCTGMKLKDCKTLACYGVKDDR----------GVACFISDIC 148
                         L   G +L+D +TL+ Y ++ +           G   F+S  C
Sbjct: 171 KIQDKEGIPPDQQRLIFAGKQLEDSRTLSDYNIQKESTLHLVLRLRGGCGIFLSHRC 227



 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 46/150 (30%)

Query: 8   VEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQ 66
           VE S+TI+N+KG + +KEG   D Q L FAG +L +GR L DY        N+++EST+ 
Sbjct: 7   VEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKESTLH 58

Query: 67  LLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD--------- 115
           L                  +L+L+  ++IFVK LT + + L+V+   TI +         
Sbjct: 59  L------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKE 100

Query: 116 --------LFCTGMKLKDCKTLACYGVKDD 137
                   L   G +L+D +TL+ Y ++ +
Sbjct: 101 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 130


>gi|9837286|gb|AAG00513.1|AF285162_1 polyubiquitin C [Mus musculus]
          Length = 886

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG S D Q L FAG +L +GR L DY        N++
Sbjct: 391 KTITLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDY--------NIQ 442

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 443 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 486

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 487 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 518



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 291 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 334

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 335 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 366



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 543 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 594

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 595 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 638

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 639 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 670



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 695 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 746

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 747 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 790

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 791 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 822



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L  GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEGGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|297805150|ref|XP_002870459.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
 gi|297316295|gb|EFH46718.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
          Length = 537

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI NLK  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 242 KTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 294

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT   + L+V+   TI        
Sbjct: 295 ESTLHLVLR----------------LRGGMQIFVKTLTGRTITLEVESSDTIDNVKAKIQ 338

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 339 DKEEIPADQQRLIFAGKQLEDGRTLADYNIQ 369



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 394 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 446

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 447 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 490

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 491 DKEGIVPDQQRLIFAGKQLEDGRTLADYNIQ 521



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 166 KTITLEVESSDTIDNVKAKIEDKEGIPTDQQRLIFAGKQLEDGR-------TLADYNIQK 218

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 219 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQ 262

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 263 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 293



 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 90  KTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGR-------TLADYNIQK 142

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 143 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIE 186

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 187 DKEGIPTDQQRLIFAGKQLEDGRTLADYNIQ 217



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+ E S TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 14  KTITLDAESSYTINNVKAQIQDKEGIPLDQQRLIFAGKQLEDGR-------TLADYNIQK 66

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           ES   +L  A++             L+  ++IFVK LT + + L+V+   TI        
Sbjct: 67  ES---ILHLALR-------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 110

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 111 DKEGILPDQQRLIFAGKQLEDGRTLADYNIQ 141


>gi|343485991|dbj|BAK61751.1| ubiquitin [Sphaerozoum punctatum]
          Length = 228

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 87  KTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 140 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQ 183

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 184 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI N++  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLDVESSDTISNVEAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|384252612|gb|EIE26088.1| hexaubiquitin protein [Coccomyxa subellipsoidea C-169]
          Length = 457

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQ 259

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQ 411

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442


>gi|384246185|gb|EIE19676.1| polyubiquitin [Coccomyxa subellipsoidea C-169]
          Length = 305

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQ 259

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290


>gi|391348265|ref|XP_003748368.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-A-like [Metaseiulus
           occidentalis]
          Length = 913

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L+DY        N++
Sbjct: 391 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDY--------NIQ 442

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 443 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 486

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 487 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 518



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 543 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 594

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 595 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 638

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 639 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYSIQ 670



 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 695 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 746

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 747 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 790

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 791 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 822



 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT   + L V+   TI +     
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGXTITLDVEASDTIENVKVKL 182

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 291 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 334

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L++ +TL+ Y ++
Sbjct: 335 QDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQ 366



 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE ++TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVELADTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 847 KTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 898

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 899 KESTLHLVL 907


>gi|343485975|dbj|BAK61744.1| ubiquitin [Collozoum amoeboides]
          Length = 228

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|226484047|emb|CAX79692.1| ubiquitin C [Schistosoma japonicum]
          Length = 229

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 182

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +LKD +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLKDGRTLSDYNIQ 214



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLKDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|37542506|gb|AAL25813.1| polyubiquitin, partial [Prunus avium]
          Length = 154

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 40/153 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 12  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 64

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 65  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 108

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVKDD 137
                    + L   G +L+D +TLA Y ++++
Sbjct: 109 DKEGTPPDQQRLIFAGKQLEDGRTLADYNIQEE 141



 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEGT  D Q L FAG +L +GR        LA  N++ 
Sbjct: 88  KTITLEVESSDTIDNVKAKIQDKEGTPPDQQRLIFAGKQLEDGR-------TLADYNIQE 140

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 141 ESTLHLVL 148


>gi|356548015|ref|XP_003542399.1| PREDICTED: polyubiquitin-A-like [Glycine max]
          Length = 614

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 472 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 524

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + V L+V+   TI        
Sbjct: 525 ESTLHLVLR----------------LRGGMQIFVKTLTGKTVTLEVESSDTIDNVKAKIQ 568

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 569 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 599



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 320 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 372

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 373 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 416

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 417 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 447



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 40/152 (26%)

Query: 1   MKTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVK 60
           ++T+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N++
Sbjct: 243 LETITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQ 295

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 296 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 339

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TLA Y ++
Sbjct: 340 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 371



 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 45/156 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTE-----EIVKLKVKVLLTI--- 113
           EST+ L+                  L+  ++IFVK LT      E + L+V+   TI   
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLETITLEVESSDTIDNV 259

Query: 114 --------------RDLFCTGMKLKDCKTLACYGVK 135
                         + L   G +L+D +TLA Y ++
Sbjct: 260 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 295



 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KTVTL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 548 KTVTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 600

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 601 ESTLHLVL 608


>gi|3789942|gb|AAC67552.1| polyubiquitin [Saccharum hybrid cultivar H32-8560]
          Length = 381

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLAXYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     R +F  G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRXIFA-GKQLEDGRTLAXYNIQ 290



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     R +F  G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRXIFA-GKQLEDGRTLADYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|349592832|gb|AEP96154.1| ubiquitin C-like protein [Euplectes orix]
          Length = 224

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 182

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ D
Sbjct: 183 QDKEGIPPDQQXLIFAGKQLEDGRTLSDYNIQKD 216



 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|343485961|dbj|BAK61738.1| ubiquitin [Larcopyle butschlii]
          Length = 188

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|325181623|emb|CCA16073.1| polyubiquitin putative [Albugo laibachii Nc14]
          Length = 538

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 467 KTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 519

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 520 ESTLHLVL 527


>gi|312160|emb|CAA51679.1| ubiquitin [Solanum lycopersicum]
          Length = 534

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTRKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 467 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 519

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 520 ESTLHLVL 527


>gi|294885539|ref|XP_002771351.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
 gi|239874907|gb|EER03167.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
          Length = 458

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT++ + L V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTDKTITLDVEASDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|307110244|gb|EFN58480.1| hypothetical protein CHLNCDRAFT_48528 [Chlorella variabilis]
          Length = 229

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLVFAGKQLEDGRTLADYNIQ 138


>gi|326517545|dbj|BAK03691.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 457

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  V +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKVQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442


>gi|28394784|gb|AAO42469.1| putative polyubiquitin [Arabidopsis lyrata]
          Length = 289

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 32/143 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 154 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 206

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK---------VLLT 112
           EST+ L+                  L+  ++IFVK LT + + L+V+         +   
Sbjct: 207 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSEIQDKEGIPPD 250

Query: 113 IRDLFCTGMKLKDCKTLACYGVK 135
            + L   G +L+D +TLA Y ++
Sbjct: 251 QQRLIFAGKQLEDGRTLADYNIQ 273



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 2   KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 54

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 55  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 98

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 99  DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 129


>gi|297847850|ref|XP_002891806.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337648|gb|EFH68065.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 384

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI NLK  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 241 KTITLEVESSDTIDNLKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 293

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 294 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 337

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 338 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 368



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 89  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 141

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 142 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 185

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 186 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 216



 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI N+K  + + EG   D Q L F+G  L +GR        LA  ++++
Sbjct: 13  KTITLDVESSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGR-------TLADYSIQK 65

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           ES   +L  A++             L+  ++IF+K LT + + L+V+   TI        
Sbjct: 66  ES---ILHLALR-------------LRGGMQIFIKTLTGKTITLEVESSDTIDNVKAKIQ 109

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 110 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 140


>gi|357148706|ref|XP_003574865.1| PREDICTED: polyubiquitin-like [Brachypodium distachyon]
          Length = 341

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 47  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY--------NIQ 98

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 99  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 142

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TLA Y ++
Sbjct: 143 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 174



 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 199 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY--------NIQ 250

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 251 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 294

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TLA Y ++
Sbjct: 295 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 326


>gi|296415756|ref|XP_002837552.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295633424|emb|CAZ81743.1| unnamed protein product [Tuber melanosporum]
          Length = 205

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 25/135 (18%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDLFCTG 120
           +EST+ L+                  L+  ++IFVK LT + + L+  +    + L   G
Sbjct: 63  KESTLHLVL----------------RLRGGMQIFVKTLTGKTITLEEGIPPDQQRLIFAG 106

Query: 121 MKLKDCKTLACYGVK 135
            +L+D +TL+ Y ++
Sbjct: 107 KQLEDGRTLSDYNIQ 121


>gi|319996466|dbj|BAJ61942.1| ubiquitin [Nymphaea hybrid cultivar]
          Length = 146

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|226499354|ref|NP_001147027.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
 gi|195606596|gb|ACG25128.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
          Length = 311

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 169 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY--------NIQ 220

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 221 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 264

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TLA Y ++
Sbjct: 265 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 296



 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 22/145 (15%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMA-------- 53
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR + +   A        
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRNLIFSPFARNAHTARS 70

Query: 54  -LASPNVKRESTMQLLFCAI--KVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
            ++ P   R S MQ+    +  K +++ V++ SD I  +K KI          + K  + 
Sbjct: 71  PISDPRSPRRSKMQIFVKTLTGKTITLEVES-SDTIDNVKAKI----------QDKEGIP 119

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L+D +TLA Y ++
Sbjct: 120 PDQQRLIFAGKQLEDGRTLADYNIQ 144


>gi|182407850|gb|ACB87916.1| polyubiquitin 1 [Malus x domestica]
          Length = 208

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT E + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGESITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D ++LA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRSLADYNIQ 138



 Score = 43.1 bits (100), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 25/37 (67%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAG 38
           KT+TL VE SETI N++  + +KEG   D Q L FAG
Sbjct: 163 KTITLEVESSETIDNVQAKIQDKEGIPPDQQRLIFAG 199


>gi|182407854|gb|ACB87918.1| polyubiquitin 3 [Malus x domestica]
          Length = 188

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 7   KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 59

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 60  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 103

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 104 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 134


>gi|413926507|gb|AFW66439.1| putative ubiquitin family protein [Zea mays]
          Length = 297

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 32/143 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK---------VLLT 112
           EST+ L+                  L+  ++IFVK LT + + L+V+         +   
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDIQDKEGIPPD 259

Query: 113 IRDLFCTGMKLKDCKTLACYGVK 135
            + L   G +L+D +TLA Y ++
Sbjct: 260 QQRLIFAGKQLEDGRTLADYNIQ 282



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|118484244|gb|ABK94002.1| unknown [Populus trichocarpa]
          Length = 305

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADNNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290


>gi|15982787|gb|AAL09741.1| AT4g05320/C17L7_240 [Arabidopsis thaliana]
          Length = 381

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 40/161 (24%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVKDDRGVACFIS 145
                    + L   G +L+D +TLA Y ++ +  +   +S
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLS 148



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|1805696|emb|CAA71664.1| polyubiquitin [Ceratitis capitata]
          Length = 134

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 4   KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 55

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 56  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 99

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 100 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 131


>gi|56754831|gb|AAW25598.1| unknown [Schistosoma japonicum]
          Length = 381

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  +H+KEG   D Q   FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVEPSDTIENVKAKIHDKEGIPPDQQRSIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 291 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 334

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 335 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 366



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 75/146 (51%), Gaps = 30/146 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K KI  K   E I   +   
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIHDK---EGIPPDQQ-- 269

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVK 135
               R +F  G +L+D +TL+ Y ++
Sbjct: 270 ----RSIFA-GKQLEDGRTLSDYNIQ 290


>gi|440792566|gb|ELR13775.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
          Length = 153

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|413926510|gb|AFW66442.1| putative ubiquitin family protein, partial [Zea mays]
          Length = 216

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 1/49 (2%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDY 49
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 211


>gi|296425005|ref|XP_002842034.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638291|emb|CAZ86225.1| unnamed protein product [Tuber melanosporum]
          Length = 305

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+KG + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIDNVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKGKI 182

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214



 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKGKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+KG + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVESSDTIDNVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 291 KESTLHLVL 299


>gi|57282601|emb|CAD27944.1| polyubiquitin-like [Oryza sativa]
          Length = 219

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK------------- 108
           EST+ L+                  L+  ++IFVK LT + + L+V+             
Sbjct: 140 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 183

Query: 109 ----VLLTIRDLFCTGMKLKDCKTLACYGVK 135
               +  T + L   G +L+D +TLA Y ++
Sbjct: 184 DKEGIHQTSKRLIFAGKQLEDGRTLADYNIQ 214



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 7/64 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG  +  + L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIHQTSKRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTM 65
           EST+
Sbjct: 216 ESTL 219


>gi|54300702|gb|AAV33127.1| ubiquitin C splice variant [Homo sapiens]
          Length = 153

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSGYNIQKE 140


>gi|440798058|gb|ELR19129.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
          Length = 229

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|6934302|gb|AAF31707.1|AF221858_1 polyubiquitin [Euphorbia esula]
          Length = 215

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 73  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 125

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 126 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 169

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 170 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 200



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 40/147 (27%)

Query: 6   LNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKRESTM 65
           L VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++EST+
Sbjct: 1   LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQKESTL 53

Query: 66  QLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------------ 113
            L+                  L+  ++IFVK LT + + L+V+   TI            
Sbjct: 54  HLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG 97

Query: 114 -----RDLFCTGMKLKDCKTLACYGVK 135
                + L   G +L+D +TLA Y ++
Sbjct: 98  IPPDQQRLIFAGKQLEDGRTLADYNIQ 124


>gi|2894308|emb|CAA11269.1| polyubiquitin [Nicotiana tabacum]
          Length = 381

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQ 259

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|21592581|gb|AAM64530.1| ubiquitin homolog [Arabidopsis thaliana]
          Length = 229

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLX----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|115187323|gb|ABI84246.1| polyubiquitin 10 [Arachis hypogaea]
          Length = 192

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|1332579|emb|CAA66667.1| polyubiquitin [Pinus sylvestris]
          Length = 761

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 619 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 671

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 672 ESTLHLVLR----------------LRGGMQIFVKTLTAKTITLEVESSDTIDNVKAKIQ 715

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 716 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 746



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 467 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 520 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 563

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 564 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 594



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVENSDTIDNVKSKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|192910770|gb|ACF06493.1| UBQ4 [Elaeis guineensis]
          Length = 384

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|283245864|gb|ABH10622.2| ubiquitin [Nicotiana tabacum]
          Length = 143

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 10  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 62

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 63  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 106

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 107 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 137


>gi|255584596|ref|XP_002533022.1| ubiquitin, putative [Ricinus communis]
 gi|223527184|gb|EEF29353.1| ubiquitin, putative [Ricinus communis]
          Length = 157

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 73/139 (52%), Gaps = 17/139 (12%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + EKEGT  D Q L FAG +L +GR        LA  NV++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQEKEGTPPDEQRLIFAGKQLADGR-------TLADYNVQK 63

Query: 62  ESTMQLLFCAIK-VLSISVKAPSDDILKLKVKIF-----VKMLTEEIVKLKVKVLLTIRD 115
           EST++L+   ++  + I V+        L+V+       VK + +E    KV +    + 
Sbjct: 64  ESTLRLVLLGLRDGMQIVVRTLKGKPFTLEVERSDAIEDVKAMIQE----KVGIPQEQQR 119

Query: 116 LFCTGMKLKDCKTLACYGV 134
           L   G  LKD +TL  Y V
Sbjct: 120 LLYLGEMLKDARTLDDYQV 138


>gi|1684857|gb|AAB36546.1| polyubiquitin [Phaseolus vulgaris]
          Length = 215

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 73  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 125

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 126 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 169

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 170 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 200



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 40/147 (27%)

Query: 6   LNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKRESTM 65
           L VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++EST+
Sbjct: 1   LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQKESTL 53

Query: 66  QLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------------ 113
            L+                  L+  ++IFVK LT + + L+V+   TI            
Sbjct: 54  HLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG 97

Query: 114 -----RDLFCTGMKLKDCKTLACYGVK 135
                + L   G +L+D +TLA Y ++
Sbjct: 98  IPPDQQRLIFAGKQLEDGRTLADYNIQ 124


>gi|30523391|gb|AAP31578.1| ubiquitin [Hevea brasiliensis]
          Length = 230

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|1107481|emb|CAA60629.1| unnamed protein product [Acanthamoeba sp. 4b3]
          Length = 172

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 40/153 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVKDD 137
                      L   G +L+D +TLA Y ++ +
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 140


>gi|388510652|gb|AFK43392.1| unknown [Medicago truncatula]
          Length = 233

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 140 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 183

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 184 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNAKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|16071|emb|CAA48140.1| ubiquitin [Antirrhinum majus]
          Length = 296

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 2   KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 54

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 55  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 98

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 99  DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 129



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 154 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 206

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 207 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 250

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 251 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 281


>gi|2760349|gb|AAB95252.1| ubiquitin [Arabidopsis thaliana]
          Length = 380

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQWLIFAGKQLEDGRTLADYNIQ 138



 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  ++++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYDIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|28436476|gb|AAO43305.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 325

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 182 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 234

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 235 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQ 278

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 279 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 309



 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 40/146 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 31  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 83

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 84  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 127

Query: 114 ---------RDLFCTGMKLKDCKTLA 130
                    + L   G +L+D +TLA
Sbjct: 128 DKEGIPPDQQRLIFAGKQLEDGRTLA 153


>gi|334362473|gb|AEG78435.1| ubiquitin C variant 3 [Epinephelus coioides]
          Length = 268

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 12  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 63

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 64  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 107

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 108 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 139



 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 25/116 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 164 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 215

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++
Sbjct: 216 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENV 255


>gi|111218906|gb|ABH08754.1| ubiquitin [Arabidopsis thaliana]
          Length = 220

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 1   KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 53

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 54  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 97

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 98  DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 128



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 153 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 205

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 206 ESTLHLVL 213


>gi|111218904|gb|ABH08753.1| ubiquitin [Arabidopsis thaliana]
          Length = 219

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 1   KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 53

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 54  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 97

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 98  DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 128



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 153 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 205

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 206 ESTLHLVL 213


>gi|290750644|gb|ADD52202.1| ubiquitin [Catharanthus roseus]
 gi|341869050|gb|AEK98798.1| ubiquitin [Carthamus tinctorius]
          Length = 381

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 291

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 292 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 335

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 336 DKEGIPPDQQRLILAGKQLEDGRTLADYNIQ 366



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 71/146 (48%), Gaps = 40/146 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K    +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKTQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTIR 114
           EST+ L+                  L+  ++IFVK LT + + L+V+       V   I+
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTTDNVKAKIQ 107

Query: 115 D----------LFCTGMKLKDCKTLA 130
           D          L   G +L+D +TLA
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLA 133



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L  AG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLILAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|224116110|ref|XP_002317213.1| predicted protein [Populus trichocarpa]
 gi|118487986|gb|ABK95814.1| unknown [Populus trichocarpa]
 gi|222860278|gb|EEE97825.1| predicted protein [Populus trichocarpa]
          Length = 229

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|388507280|gb|AFK41706.1| unknown [Medicago truncatula]
          Length = 233

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|302595954|sp|P0CG84.1|UBI4P_NICSY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|170354|gb|AAA34124.1| pentameric polyubiquitin, partial [Nicotiana sylvestris]
          Length = 377

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 7   KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 59

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 60  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 103

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 104 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 134



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 159 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 211

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 212 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 255

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 256 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 286



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 311 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 363

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 364 ESTLHLVL 371


>gi|73747822|gb|AAZ82816.1| ubiquitin monomer protein [Morus mongolica]
          Length = 152

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|308809920|ref|XP_003082269.1| polyubiquitin (ISS) [Ostreococcus tauri]
 gi|116060737|emb|CAL57215.1| polyubiquitin (ISS) [Ostreococcus tauri]
          Length = 288

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 63  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 115

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 116 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 159

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 160 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 190



 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 29/43 (67%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNG 44
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +G
Sbjct: 215 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 257



 Score = 42.4 bits (98), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 40/128 (31%)

Query: 25  EGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKRESTMQLLFCAIKVLSISVKAPSD 84
           +G   D Q L FAG +L +GR        LA  N+++EST+ L+                
Sbjct: 10  DGIPPDQQRLIFAGKQLEDGR-------TLADYNIQKESTLHLVLR-------------- 48

Query: 85  DILKLKVKIFVKMLTEEIVKLKVKVLLTI-----------------RDLFCTGMKLKDCK 127
             L+  ++IFVK LT + + L+V+   TI                 + L   G +L+D +
Sbjct: 49  --LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 106

Query: 128 TLACYGVK 135
           TLA Y ++
Sbjct: 107 TLADYNIQ 114


>gi|241740196|gb|ACS68205.1| ubiquitin 10.2 [Brassica napus]
          Length = 381

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|217074516|gb|ACJ85618.1| unknown [Medicago truncatula]
          Length = 229

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|157138585|ref|XP_001664265.1| ubiquitin [Aedes aegypti]
 gi|108880553|gb|EAT44778.1| AAEL003888-PA [Aedes aegypti]
          Length = 154

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 27/144 (18%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE  +TI+N+KG + +KEG   D Q L FAG +L +GR       AL+  NV++
Sbjct: 11  KTITLDVEAVDTIQNIKGKIEDKEGIPPDQQRLIFAGKQLEDGR-------ALSDYNVQK 63

Query: 62  ESTMQLLFCAIKVLSISVK-----------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
            ST+ L+      + I VK            P D +  L+VKI  K+  EE+   +++  
Sbjct: 64  GSTLHLVLRLRGGMQIFVKMLTGRTMAIDTEPEDSVETLRVKISEKL--EEMPPNQLR-- 119

Query: 111 LTIRDLFCTGMKLKDCKTLACYGV 134
                L   G +L+D +TL  Y +
Sbjct: 120 -----LIFAGKQLEDGRTLQEYSI 138


>gi|242062832|ref|XP_002452705.1| hypothetical protein SORBIDRAFT_04g031060 [Sorghum bicolor]
 gi|241932536|gb|EES05681.1| hypothetical protein SORBIDRAFT_04g031060 [Sorghum bicolor]
          Length = 459

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442


>gi|4115337|gb|AAD03343.1| ubiquitin [Pisum sativum]
          Length = 457

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442


>gi|242055399|ref|XP_002456845.1| hypothetical protein SORBIDRAFT_03g043940 [Sorghum bicolor]
 gi|242064116|ref|XP_002453347.1| hypothetical protein SORBIDRAFT_04g004280 [Sorghum bicolor]
 gi|357148716|ref|XP_003574869.1| PREDICTED: polyubiquitin-like isoform 1 [Brachypodium distachyon]
 gi|357148721|ref|XP_003574870.1| PREDICTED: polyubiquitin-like isoform 2 [Brachypodium distachyon]
 gi|357148724|ref|XP_003574871.1| PREDICTED: polyubiquitin-like isoform 3 [Brachypodium distachyon]
 gi|302393780|sp|P69309.2|UBIQP_AVEFA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|320608|pir||S28426 polyubiquitin 4 - wild oat
 gi|15989|emb|CAA49200.1| tetraubiquitin [Avena fatua]
 gi|777758|gb|AAC37466.1| polyubiquitin [Saccharum hybrid cultivar H65-7052]
 gi|25044841|gb|AAM28291.1| tetrameric ubiquitin [Ananas comosus]
 gi|241928820|gb|EES01965.1| hypothetical protein SORBIDRAFT_03g043940 [Sorghum bicolor]
 gi|241933178|gb|EES06323.1| hypothetical protein SORBIDRAFT_04g004280 [Sorghum bicolor]
 gi|332379896|gb|AEE65379.1| ubiquitin 1 [Panicum virgatum]
 gi|451854822|gb|EMD68114.1| hypothetical protein COCSADRAFT_108224 [Cochliobolus sativus
           ND90Pr]
 gi|452000986|gb|EMD93446.1| hypothetical protein COCHEDRAFT_1202381 [Cochliobolus
           heterostrophus C5]
          Length = 305

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290


>gi|224286458|gb|ACN40936.1| unknown [Picea sitchensis]
          Length = 458

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 140 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 183

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 184 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 291

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 292 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 335

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 336 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 366



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 391 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 443

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 444 ESTLHLVL 451


>gi|6118549|gb|AAF04147.1| ubiquitin precursor [Hevea brasiliensis]
          Length = 381

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 291

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 292 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 335

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 336 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 366



 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLGVESSDTIDNVKAKIQ 107

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     R +F  G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRFIFA-GKQLEDGRTLADYNIQ 138



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRL-MNGRLIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG  L M   L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGSSLRMVAPLADY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TLA Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290


>gi|197129052|gb|ACH45550.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
          Length = 245

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDDNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TL+ Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDY 49
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 211


>gi|162461367|ref|NP_001105376.1| polyubiquitin [Zea mays]
 gi|899608|gb|AAC49025.1| polyubiquitin [Zea mays]
          Length = 381

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|602076|emb|CAA54603.1| pentameric polyubiquitin [Nicotiana tabacum]
          Length = 346

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290


>gi|357123401|ref|XP_003563399.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-C-like [Brachypodium
           distachyon]
          Length = 535

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 393 KTITLXVESSDTIDNVKSKIQDKEGLPPDQQRLIFAGKQLEDGR-------TLADYNIQK 445

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
            ST+ L+                  L+  ++IFVK LT + + L+VK   TI        
Sbjct: 446 XSTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVKSSDTIDNVKAKIQ 489

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 490 DKEGTPPDQQQLIFAGKQLEDGRTLADYNIQ 520



 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 46/155 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK----VKIFVKMLTEEIVKLKVKVLLTI---- 113
           EST+ L                  +L+L+    ++IFVK LT + + L V+   TI    
Sbjct: 368 ESTLHL------------------VLRLRGGQXMQIFVKTLTGKTITLXVESSDTIDNVK 409

Query: 114 -------------RDLFCTGMKLKDCKTLACYGVK 135
                        + L   G +L+D +TLA Y ++
Sbjct: 410 SKIQDKEGLPPDQQRLIFAGKQLEDGRTLADYNIQ 444



 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL V+ S+TI N+K  + +KEGT  D Q L FAG +L +GR        LA  N+++
Sbjct: 469 KTITLEVKSSDTIDNVKAKIQDKEGTPPDQQQLIFAGKQLEDGR-------TLADYNIQK 521

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 522 ESTLHLVL 529


>gi|297812245|ref|XP_002874006.1| hypothetical protein ARALYDRAFT_488966 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319843|gb|EFH50265.1| hypothetical protein ARALYDRAFT_488966 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 382

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|225465625|ref|XP_002267452.1| PREDICTED: polyubiquitin 4-like isoform 1 [Vitis vinifera]
 gi|359488113|ref|XP_003633702.1| PREDICTED: polyubiquitin 4-like isoform 2 [Vitis vinifera]
          Length = 386

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|225465623|ref|XP_002267206.1| PREDICTED: polyubiquitin-C-like [Vitis vinifera]
          Length = 538

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 467 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 519

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 520 ESTLHLVL 527


>gi|194944118|ref|XP_001983129.1| GG19855 [Drosophila erecta]
 gi|190647611|gb|EDV45009.1| GG19855 [Drosophila erecta]
          Length = 328

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 69  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 120

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 121 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 164

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 165 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 196



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 25/116 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 221 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 272

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++
Sbjct: 273 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENV 312



 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 42/143 (29%)

Query: 11  SETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQLLF 69
           S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N+++EST+ L+ 
Sbjct: 2   SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKESTLHLVL 53

Query: 70  CAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD-------------- 115
                            L+  ++IFVK LT + + L+V+   TI +              
Sbjct: 54  R----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 97

Query: 116 ---LFCTGMKLKDCKTLACYGVK 135
              L   G +L+D +TL+ Y ++
Sbjct: 98  QQRLIFAGKQLEDGRTLSDYNIQ 120


>gi|302595949|sp|P0CH04.1|UBI1P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595950|sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|288112|emb|CAA45621.1| polyubiquitin [Petroselinum crispum]
 gi|288114|emb|CAA45622.1| polyubiquitin [Petroselinum crispum]
          Length = 458

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442


>gi|346986300|ref|NP_001231307.1| polyubiquitin [Cricetulus griseus]
 gi|2627133|dbj|BAA23488.1| polyubiquitin [Cricetulus griseus]
          Length = 1038

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y V+
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVQ 594



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        NV+
Sbjct: 543 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NVQ 594

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 595 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 638

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 639 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 670



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 670

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 671 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 714

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 715 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 746



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 771 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 822

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 823 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 866

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 867 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 898



 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 25/114 (21%)

Query: 2    KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
            KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 923  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 974

Query: 61   RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIR 114
            +EST+ L+                  L+  ++IFVK LT + + L+V+   TI+
Sbjct: 975  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSNTIK 1012


>gi|297724233|ref|NP_001174480.1| Os05g0504766 [Oryza sativa Japonica Group]
 gi|242096828|ref|XP_002438904.1| hypothetical protein SORBIDRAFT_10g028020 [Sorghum bicolor]
 gi|4809266|gb|AAD30173.1|AF148448_1 polyubiquitin [Sporobolus stapfianus]
 gi|57863866|gb|AAW56906.1| polyubiquitin [Oryza sativa Japonica Group]
 gi|125552905|gb|EAY98614.1| hypothetical protein OsI_20535 [Oryza sativa Indica Group]
 gi|222632152|gb|EEE64284.1| hypothetical protein OsJ_19121 [Oryza sativa Japonica Group]
 gi|241917127|gb|EER90271.1| hypothetical protein SORBIDRAFT_10g028020 [Sorghum bicolor]
 gi|255676474|dbj|BAH93208.1| Os05g0504766 [Oryza sativa Japonica Group]
 gi|326510917|dbj|BAJ91806.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326521968|dbj|BAK04112.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|383843954|gb|AFH53939.1| polyubiquitin 4 [Brachypodium distachyon]
 gi|383843956|gb|AFH53940.1| polyubiquitin 10 [Brachypodium distachyon]
          Length = 381

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|413926513|gb|AFW66445.1| ubiquitin2 [Zea mays]
          Length = 535

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 13  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 65

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 66  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 109

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 110 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 140



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 165 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 217

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 218 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 261

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 262 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 292



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 317 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 369

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 370 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 413

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 414 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 444



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 469 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 521

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 522 ESTLHLVL 529


>gi|355754493|gb|AET06143.1| ubiquitin [Papaver somniferum]
          Length = 229

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|326501424|dbj|BAK02501.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 457

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 140 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 183

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 184 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 291

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 292 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 335

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 336 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 366



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAEIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 391 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 443

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 444 ESTLHLVL 451


>gi|326495764|dbj|BAJ85978.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326509329|dbj|BAJ91581.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 305

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|197129049|gb|ACH45547.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
          Length = 209

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 28/40 (70%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRL 41
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 202


>gi|168024852|ref|XP_001764949.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683758|gb|EDQ70165.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 318

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290


>gi|147834511|emb|CAN71997.1| hypothetical protein VITISV_004025 [Vitis vinifera]
          Length = 538

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLKVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTIR 114
           +ST+ L+                  L+  ++IFVK LT + + L+V+       V   I+
Sbjct: 64  DSTLHLVLR----------------LRGGMQIFVKTLTRKTITLEVESSDTTDNVKAKIQ 107

Query: 115 D----------LFCTGMKLKDCKTLACYGVK 135
           D          L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L+DY        N++
Sbjct: 467 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLVDY--------NIQ 518

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 519 KESTLHLIL 527


>gi|28804499|dbj|BAC57955.1| polyubiquitin [Aster tripolium]
          Length = 229

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|2760347|gb|AAB95251.1| ubiquitin [Arabidopsis thaliana]
          Length = 456

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442


>gi|18420267|ref|NP_568397.1| polyubiquitin 4 [Arabidopsis thaliana]
 gi|297826781|ref|XP_002881273.1| hypothetical protein ARALYDRAFT_482268 [Arabidopsis lyrata subsp.
           lyrata]
 gi|302595977|sp|P0CH32.1|UBQ4_ARATH RecName: Full=Polyubiquitin 4; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|17678|emb|CAA31331.1| unnamed protein product [Arabidopsis thaliana]
 gi|987519|gb|AAB53929.1| polyubiquitin [Arabidopsis thaliana]
 gi|297327112|gb|EFH57532.1| hypothetical protein ARALYDRAFT_482268 [Arabidopsis lyrata subsp.
           lyrata]
 gi|332005484|gb|AED92867.1| polyubiquitin 4 [Arabidopsis thaliana]
 gi|226499|prf||1515347A poly-ubiquitin
          Length = 382

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|356537527|ref|XP_003537278.1| PREDICTED: polyubiquitin 3-like [Glycine max]
          Length = 306

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290


>gi|225465615|ref|XP_002267017.1| PREDICTED: polyubiquitin-C-like [Vitis vinifera]
          Length = 538

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTIR 114
           +ST+ L+                  L+  ++IFVK LT + + L+V+       V   I+
Sbjct: 64  DSTLHLVLR----------------LRGGMQIFVKTLTRKTITLEVESSDTTDNVKAKIQ 107

Query: 115 D----------LFCTGMKLKDCKTLACYGVK 135
           D          L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLAHYNIQ 138



 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L+DY        N++
Sbjct: 467 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLVDY--------NIQ 518

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 519 KESTLHLVL 527


>gi|169635149|gb|ACA58351.1| ubiquitin-like protein [Sandersonia aurantiaca]
          Length = 189

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|111218908|gb|ABH08755.1| ubiquitin [Arabidopsis thaliana]
          Length = 221

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 3   KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 55

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 56  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 99

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 100 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 130



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 155 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 207

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 208 ESTLHLVL 215


>gi|21554192|gb|AAM63271.1| unknown [Arabidopsis thaliana]
          Length = 154

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQXLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|14596193|gb|AAK68824.1| Unknown protein [Arabidopsis thaliana]
          Length = 229

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|302393784|sp|P69315.2|UBIQP_LINUS RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related; Flags:
           Precursor
 gi|168304|gb|AAA33401.1| ubiquitin, partial [Linum usitatissimum]
          Length = 305

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 52  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 104

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 105 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 148

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 149 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 179



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 23/112 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 204 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 256

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 257 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 292



 Score = 38.9 bits (89), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 40/123 (32%)

Query: 30  DIQDLFFAGDRLMNGRLIDYEDMALASPNVKRESTMQLLFCAIKVLSISVKAPSDDILKL 89
           D Q L FAG +L +GR        LA  N+++EST+ L+                  L+ 
Sbjct: 4   DQQRLIFAGKQLEDGR-------TLADYNIQKESTLHLVLR----------------LRG 40

Query: 90  KVKIFVKMLTEEIVKLKVKVLLTI-----------------RDLFCTGMKLKDCKTLACY 132
            ++IF+K LT + + L+V+   TI                 + L   G +L+D +TLA Y
Sbjct: 41  GMQIFLKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 100

Query: 133 GVK 135
            ++
Sbjct: 101 NIQ 103


>gi|363992286|gb|AEW46688.1| polyubiquitin, partial [Ulva linza]
          Length = 226

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|357474769|ref|XP_003607670.1| Ubiquitin [Medicago truncatula]
 gi|355508725|gb|AES89867.1| Ubiquitin [Medicago truncatula]
          Length = 533

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 467 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 519

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 520 ESTLHLVL 527


>gi|342298464|emb|CBY46746.1| polyubiquitin 10 protein [Lepidium campestre]
          Length = 381

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 140 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 183

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 184 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 291

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 292 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 335

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 336 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 366



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+T+ N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|328856761|gb|EGG05881.1| hypothetical protein MELLADRAFT_87680 [Melampsora larici-populina
           98AG31]
          Length = 535

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 391 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 443

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 444 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 487

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 488 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 518



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442


>gi|326511535|dbj|BAJ91912.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326522901|dbj|BAJ88496.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 457

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442


>gi|151935411|gb|ABS18744.1| ubiqutin ligase-like protein [Oryza sativa Japonica Group]
 gi|326518380|dbj|BAJ88219.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 229

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|413926514|gb|AFW66446.1| ubiquitin2 [Zea mays]
 gi|413935669|gb|AFW70220.1| polyubiquitin-like protein [Zea mays]
          Length = 153

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|225461088|ref|XP_002282119.1| PREDICTED: polyubiquitin-A-like [Vitis vinifera]
          Length = 761

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 467 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 520 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 563

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 564 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 594



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 619 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 671

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 672 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 715

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 716 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 746


>gi|155965254|gb|ABU40645.1| polyubiquitin [Triticum aestivum]
          Length = 380

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|124359683|gb|ABD32351.2| Ubiquitin [Medicago truncatula]
          Length = 538

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 16  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 68

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 69  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 112

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 113 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 143



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 168 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 220

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 221 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 264

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 265 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 295



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 396 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 448

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 449 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 492

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 493 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 523



 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 320 KTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 371

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 372 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 415

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TLA Y ++
Sbjct: 416 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 447


>gi|3126967|gb|AAC16012.1| polyubiquitin [Elaeagnus umbellata]
          Length = 458

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE  +TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESLDTIDNVKAQIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 391 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 443

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 444 ESTLHLVL 451


>gi|16660459|gb|AAL27563.1|AF429429_1 polyubiquitin OUB1 [Olea europaea]
          Length = 305

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290


>gi|240255756|ref|NP_849300.4| polyubiquitin 10 [Arabidopsis thaliana]
 gi|240255762|ref|NP_567291.4| polyubiquitin 10 [Arabidopsis thaliana]
 gi|240255764|ref|NP_001078353.4| polyubiquitin 10 [Arabidopsis thaliana]
 gi|224132654|ref|XP_002327848.1| predicted protein [Populus trichocarpa]
 gi|449433926|ref|XP_004134747.1| PREDICTED: polyubiquitin-like isoform 1 [Cucumis sativus]
 gi|449433928|ref|XP_004134748.1| PREDICTED: polyubiquitin-like isoform 2 [Cucumis sativus]
 gi|302393785|sp|P69322.2|UBIQP_PEA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|20589|emb|CAA34886.1| unnamed protein product [Pisum sativum]
 gi|4115339|gb|AAD03344.1| ubiquitin [Pisum sativum]
 gi|15450661|gb|AAK96602.1| AT4g05320/C17L7_240 [Arabidopsis thaliana]
 gi|49532982|dbj|BAD26592.1| polyubiquitin [Populus nigra]
 gi|82409051|gb|ABB73307.1| ubiquitin [Lotus japonicus]
 gi|118481117|gb|ABK92512.1| unknown [Populus trichocarpa]
 gi|118482690|gb|ABK93264.1| unknown [Populus trichocarpa]
 gi|118488167|gb|ABK95903.1| unknown [Populus trichocarpa]
 gi|118488391|gb|ABK96012.1| unknown [Populus trichocarpa]
 gi|118488630|gb|ABK96127.1| unknown [Populus trichocarpa]
 gi|217874292|gb|ACK56276.1| ubiquitin [Populus trichocarpa]
 gi|222837257|gb|EEE75636.1| predicted protein [Populus trichocarpa]
 gi|332657101|gb|AEE82501.1| polyubiquitin 10 [Arabidopsis thaliana]
 gi|332657104|gb|AEE82504.1| polyubiquitin 10 [Arabidopsis thaliana]
 gi|332657105|gb|AEE82505.1| polyubiquitin 10 [Arabidopsis thaliana]
 gi|226707|prf||1603402A poly-ubiquitin
          Length = 381

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|403366242|gb|EJY82919.1| Ubiquitin [Oxytricha trifallax]
          Length = 379

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 80/170 (47%), Gaps = 51/170 (30%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACY---------GVKDDRGVACFI 144
                       L   G +L+D +TL+ Y         G +  R  A F+
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYTSRKIYSSFGPQTQRWYAIFV 308



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 314 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 365

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 366 KESTLHLVL 374


>gi|356548684|ref|XP_003542730.1| PREDICTED: polyubiquitin 10-like [Glycine max]
          Length = 457

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|331236894|ref|XP_003331105.1| polyubiquitin-A [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
 gi|309310095|gb|EFP86686.1| polyubiquitin-A [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
          Length = 609

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 467 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 520 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 563

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 564 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 594


>gi|297840967|ref|XP_002888365.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
 gi|297334206|gb|EFH64624.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
          Length = 458

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+++   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEIESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290


>gi|1321735|emb|CAA64326.1| ubiquitin [Carabus alpestris]
          Length = 139

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|30679302|ref|NP_849292.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|186511482|ref|NP_001118922.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|240255760|ref|NP_974516.4| polyubiquitin 10 [Arabidopsis thaliana]
 gi|224115232|ref|XP_002316978.1| predicted protein [Populus trichocarpa]
 gi|297813891|ref|XP_002874829.1| hypothetical protein ARALYDRAFT_490155 [Arabidopsis lyrata subsp.
           lyrata]
 gi|356536051|ref|XP_003536554.1| PREDICTED: polyubiquitin-like isoform 1 [Glycine max]
 gi|356536053|ref|XP_003536555.1| PREDICTED: polyubiquitin-like isoform 2 [Glycine max]
 gi|356536055|ref|XP_003536556.1| PREDICTED: polyubiquitin-like isoform 3 [Glycine max]
 gi|449458219|ref|XP_004146845.1| PREDICTED: polyubiquitin-like [Cucumis sativus]
 gi|449517130|ref|XP_004165599.1| PREDICTED: polyubiquitin-like [Cucumis sativus]
 gi|302393787|sp|P69325.2|UBIQP_SOYBN RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302596002|sp|Q3E7T8.2|UBQ14_ARATH RecName: Full=Polyubiquitin 14; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|1076708|pir||S49332 polyubiquitin 4 - common sunflower
 gi|25294250|pir||G85036 polyubiquitin [imported] - Arabidopsis thaliana
 gi|303901|dbj|BAA03764.1| ubiquitin [Glycine max]
 gi|456714|dbj|BAA05670.1| ubiquitin [Glycine max]
 gi|556688|emb|CAA84440.1| seed tetraubiquitin [Helianthus annuus]
 gi|994785|dbj|BAA05085.1| Ubiquitin [Glycine max]
 gi|4263514|gb|AAD15340.1| putative polyubiquitin [Arabidopsis thaliana]
 gi|7269774|emb|CAB77774.1| polyubiquitin [Arabidopsis thaliana]
 gi|21593346|gb|AAM65295.1| polyubiquitin (UBQ14) [Arabidopsis thaliana]
 gi|53850087|emb|CAH59738.1| polyubiquitin [Plantago major]
 gi|222423150|dbj|BAH19554.1| AT4G02890 [Arabidopsis thaliana]
 gi|222860043|gb|EEE97590.1| predicted protein [Populus trichocarpa]
 gi|297320666|gb|EFH51088.1| hypothetical protein ARALYDRAFT_490155 [Arabidopsis lyrata subsp.
           lyrata]
 gi|332656846|gb|AEE82246.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|332656847|gb|AEE82247.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|332657103|gb|AEE82503.1| polyubiquitin 10 [Arabidopsis thaliana]
 gi|399513942|gb|AFP43341.1| polyubiquitin [Arabidopsis thaliana]
 gi|1096513|prf||2111434A tetraubiquitin
          Length = 305

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290


>gi|356548680|ref|XP_003542728.1| PREDICTED: polyubiquitin-C-like isoform 1 [Glycine max]
 gi|356548682|ref|XP_003542729.1| PREDICTED: polyubiquitin-C-like isoform 2 [Glycine max]
          Length = 533

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 467 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 519

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 520 ESTLHLVL 527


>gi|255081913|ref|XP_002508175.1| ubiquitin [Micromonas sp. RCC299]
 gi|303285332|ref|XP_003061956.1| ubiquitin [Micromonas pusilla CCMP1545]
 gi|226456367|gb|EEH53668.1| ubiquitin [Micromonas pusilla CCMP1545]
 gi|226523451|gb|ACO69433.1| ubiquitin [Micromonas sp. RCC299]
          Length = 381

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|195587566|ref|XP_002083532.1| GD13313 [Drosophila simulans]
 gi|194195541|gb|EDX09117.1| GD13313 [Drosophila simulans]
          Length = 195

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|226763|prf||1604470A poly-ubiquitin
          Length = 272

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 54  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 106

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 107 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 150

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 151 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 181



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 206 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 258

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 259 ESTLHLVL 266



 Score = 42.0 bits (97), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 40/127 (31%)

Query: 26  GTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKRESTMQLLFCAIKVLSISVKAPSDD 85
           G   D Q L FAG +L +GR        LA  N+++EST+ L+                 
Sbjct: 2   GIPPDQQRLIFAGKQLEDGR-------TLADYNIQKESTLHLVLR--------------- 39

Query: 86  ILKLKVKIFVKMLTEEIVKLKVKVLLTI-----------------RDLFCTGMKLKDCKT 128
            L+  ++IFVK LT + + L+V+   TI                 + L   G +L+D +T
Sbjct: 40  -LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 98

Query: 129 LACYGVK 135
           LA Y ++
Sbjct: 99  LADYNIQ 105


>gi|357513725|ref|XP_003627151.1| Ubiquitin [Medicago truncatula]
 gi|327492449|dbj|BAK18565.1| polyubiquitin [Mesembryanthemum crystallinum]
 gi|355521173|gb|AET01627.1| Ubiquitin [Medicago truncatula]
          Length = 533

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 467 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 519

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 520 ESTLHLVL 527


>gi|225465609|ref|XP_002266370.1| PREDICTED: polyubiquitin 4-like [Vitis vinifera]
          Length = 383

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|102655942|gb|AAY33920.2| polyubiquitin [Euphorbia characias]
          Length = 381

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 291

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 292 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 335

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 336 DKEGIPPSQQRLIFAGKQLEDGRTLADYNIQ 366



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K    +KEG   D Q L FAG  L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKFQDKEGIPPDQQRLIFAGKHLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G  L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKHLEDGRTLADYNIQ 138



 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG  L +GR        LA  N+++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKHLEDGR-------TLADYNIQK 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 140 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 183

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L   +TLA Y ++
Sbjct: 184 DKEGIPPDQQRLIFAGKQLDHGRTLADYNIQ 214


>gi|18412785|ref|NP_567286.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|30679296|ref|NP_849291.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|79325001|ref|NP_001031585.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|186511479|ref|NP_567247.2| polyubiquitin 14 [Arabidopsis thaliana]
 gi|186511546|ref|NP_001118936.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|224078711|ref|XP_002305607.1| predicted protein [Populus trichocarpa]
 gi|224169339|ref|XP_002339256.1| predicted protein [Populus trichocarpa]
 gi|302595976|sp|P0CH33.1|UBQ11_ARATH RecName: Full=Polyubiquitin 11; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|5732081|gb|AAD48980.1|AF162444_12 contains similarity to Pfam family PF00240 - Ubiquitin family;
           score=526.5, E=1.9e-154, N=3 [Arabidopsis thaliana]
 gi|3882081|emb|CAA10056.1| polyubiquitin [Vicia faba]
 gi|7267264|emb|CAB81047.1| AT4g05050 [Arabidopsis thaliana]
 gi|12583569|emb|CAC27335.1| putative polyubiquitin [Picea abies]
 gi|15450587|gb|AAK96565.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
 gi|15810026|gb|AAL06940.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
 gi|15982846|gb|AAL09770.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
 gi|20466093|gb|AAM19968.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
 gi|24899675|gb|AAN65052.1| Unknown protein [Arabidopsis thaliana]
 gi|56481667|gb|AAV92464.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481669|gb|AAV92465.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481671|gb|AAV92466.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481673|gb|AAV92467.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481675|gb|AAV92468.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481677|gb|AAV92469.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481679|gb|AAV92470.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481681|gb|AAV92471.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481683|gb|AAV92472.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481685|gb|AAV92473.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481687|gb|AAV92474.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481689|gb|AAV92475.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481691|gb|AAV92476.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481693|gb|AAV92477.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481695|gb|AAV92478.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481697|gb|AAV92479.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481699|gb|AAV92480.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481701|gb|AAV92481.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481703|gb|AAV92482.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481705|gb|AAV92483.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481707|gb|AAV92484.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481709|gb|AAV92485.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481711|gb|AAV92486.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481713|gb|AAV92487.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481715|gb|AAV92488.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481717|gb|AAV92489.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481719|gb|AAV92490.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|110740912|dbj|BAE98552.1| hypothetical protein [Arabidopsis thaliana]
 gi|222848571|gb|EEE86118.1| predicted protein [Populus trichocarpa]
 gi|222874764|gb|EEF11895.1| predicted protein [Populus trichocarpa]
 gi|332656844|gb|AEE82244.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|332656845|gb|AEE82245.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|332657068|gb|AEE82468.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|332657069|gb|AEE82469.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|332657070|gb|AEE82470.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|399513946|gb|AFP43343.1| polyubiquitin [Arabidopsis thaliana]
          Length = 229

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|226502871|ref|NP_001148453.1| LOC100282068 [Zea mays]
 gi|224059606|ref|XP_002299930.1| predicted protein [Populus trichocarpa]
 gi|357474771|ref|XP_003607671.1| Ubiquitin [Medicago truncatula]
 gi|902586|gb|AAC49014.1| ubiquitin [Zea mays]
 gi|195619382|gb|ACG31521.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
 gi|222847188|gb|EEE84735.1| predicted protein [Populus trichocarpa]
 gi|238013752|gb|ACR37911.1| unknown [Zea mays]
 gi|355508726|gb|AES89868.1| Ubiquitin [Medicago truncatula]
 gi|413926508|gb|AFW66440.1| putative ubiquitin family protein isoform 1 [Zea mays]
 gi|413926509|gb|AFW66441.1| putative ubiquitin family protein isoform 2 [Zea mays]
          Length = 381

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|902584|gb|AAC49013.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
          Length = 533

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVVR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 467 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 519

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 520 ESTLHLVL 527


>gi|240255754|ref|NP_849299.4| polyubiquitin 10 [Arabidopsis thaliana]
 gi|240255758|ref|NP_849301.4| polyubiquitin 10 [Arabidopsis thaliana]
 gi|297809731|ref|XP_002872749.1| hexameric polyubiquitin [Arabidopsis lyrata subsp. lyrata]
 gi|449454712|ref|XP_004145098.1| PREDICTED: polyubiquitin 10-like [Cucumis sativus]
 gi|449471945|ref|XP_004153450.1| PREDICTED: polyubiquitin 10-like [Cucumis sativus]
 gi|302595948|sp|P0CG85.1|UBI1P_NICSY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302596003|sp|Q8H159.2|UBQ10_ARATH RecName: Full=Polyubiquitin 10; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|170352|gb|AAA34123.1| hexameric polyubiquitin [Nicotiana sylvestris]
 gi|870792|gb|AAA68878.1| polyubiquitin [Arabidopsis thaliana]
 gi|4115333|gb|AAD03341.1| ubiquitin [Pisum sativum]
 gi|4115335|gb|AAD03342.1| ubiquitin [Pisum sativum]
 gi|22655101|gb|AAM98141.1| polyubiquitin UBQ10 [Arabidopsis thaliana]
 gi|118481031|gb|ABK92469.1| unknown [Populus trichocarpa]
 gi|147805226|emb|CAN64480.1| hypothetical protein VITISV_002813 [Vitis vinifera]
 gi|241740189|gb|ACS68204.1| ubiquitin 10.1 [Brassica napus]
 gi|297318586|gb|EFH49008.1| hexameric polyubiquitin [Arabidopsis lyrata subsp. lyrata]
 gi|312282619|dbj|BAJ34175.1| unnamed protein product [Thellungiella halophila]
 gi|332657100|gb|AEE82500.1| polyubiquitin 10 [Arabidopsis thaliana]
 gi|332657102|gb|AEE82502.1| polyubiquitin 10 [Arabidopsis thaliana]
          Length = 457

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442


>gi|115444401|ref|NP_001045980.1| Os02g0161900 [Oryza sativa Japonica Group]
 gi|115469558|ref|NP_001058378.1| Os06g0681400 [Oryza sativa Japonica Group]
 gi|6013289|gb|AAF01315.1|AF184279_1 polyubiquitin [Oryza sativa Indica Group]
 gi|6013291|gb|AAF01316.1|AF184280_1 polyubiquitin [Oryza sativa Indica Group]
 gi|416038|emb|CAA53665.1| polyubiquitin [Oryza sativa Indica Group]
 gi|1574944|gb|AAC49806.1| polyubiquitin [Oryza sativa Indica Group]
 gi|49389251|dbj|BAD25213.1| polyubiquitin 6 [Oryza sativa Japonica Group]
 gi|113535511|dbj|BAF07894.1| Os02g0161900 [Oryza sativa Japonica Group]
 gi|113596418|dbj|BAF20292.1| Os06g0681400 [Oryza sativa Japonica Group]
 gi|215715366|dbj|BAG95117.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218190115|gb|EEC72542.1| hypothetical protein OsI_05955 [Oryza sativa Indica Group]
 gi|222622224|gb|EEE56356.1| hypothetical protein OsJ_05481 [Oryza sativa Japonica Group]
 gi|284431760|gb|ADB84621.1| polyubiquitin [Oryza sativa Japonica Group]
 gi|306415955|gb|ADM86852.1| polyubiquitin [Oryza sativa Japonica Group]
 gi|326504784|dbj|BAK06683.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|332379898|gb|AEE65380.1| ubiquitin 2 [Panicum virgatum]
 gi|413926517|gb|AFW66449.1| ubiquitin2 [Zea mays]
          Length = 457

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442


>gi|357123434|ref|XP_003563415.1| PREDICTED: polyubiquitin-A-like [Brachypodium distachyon]
          Length = 609

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 467 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 520 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 563

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 564 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 594


>gi|356519611|ref|XP_003528465.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-like [Glycine max]
          Length = 776

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 74/146 (50%), Gaps = 36/146 (24%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 467 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK---VLLTIRD--- 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   V   ++D   
Sbjct: 520 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESXNVKAKVQDKEG 563

Query: 116 -------LFCTGMKLKDCKTLACYGV 134
                  L   G +L+D +TLA Y +
Sbjct: 564 IPPDQQRLIFAGKQLQDGRTLADYNI 589



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 41/146 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KE    D Q L FAG +L +G       + LA  N+  
Sbjct: 615 KTITLEVESSDTIDNVKAKIQDKESIPPDQQRLIFAGKQLEDG-------LTLADYNIX- 666

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK L  + V L+V+   TI        
Sbjct: 667 ESTLHLVLR----------------LRGGMQIFVKTLIGKSVTLEVESSDTIDNVKAKFQ 710

Query: 114 ---------RDLFCTGMKLKDCKTLA 130
                    R L   G +L+D +TLA
Sbjct: 711 DKEGILPDQRRLIFAGKQLEDGRTLA 736


>gi|297808451|ref|XP_002872109.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317946|gb|EFH48368.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 383

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 88  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 140

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 141 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 184

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 185 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 215



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 240 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 292

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 293 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 336

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 337 DKEGVPPDQQRLIFAGKQLEDGRTLADYNIQ 367



 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 12  KTITLEVESSDTIDNVKAKIQDKEGIPLDQQRLIFAGKQLEDGR-------TLADYNIQK 64

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 65  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 108

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 109 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 139



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 316 KTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLEDGR-------TLADYNIQK 368

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 369 ESTLHLVL 376


>gi|68160568|gb|AAY86773.1| polyubiquitin [Noccaea caerulescens]
          Length = 382

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|18824|emb|CAA40324.1| hexaubiquitin protein [Helianthus annuus]
 gi|1204096|emb|CAA40325.1| hexaubiquitin protein [Helianthus annuus]
          Length = 457

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442


>gi|28436487|gb|AAO43310.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 250

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL V+ S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 31  KTITLEVKSSDTIDNIKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 83

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT +I+ L+V+   TI        
Sbjct: 84  ESTLHLVLR----------------LRGGMQIFVKTLTGKIITLEVESSDTIDNVKAKIQ 127

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 128 DKEWIPPDQQRLIFAGKQLEDGRTLADYNIQ 158



 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           K +TL VE S+TI N+K  + +KE    D Q L FAG +L +GR        LA  N+++
Sbjct: 107 KIITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 159

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 160 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 203

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 204 DKEGIPPDQQRLIFAGKQLEDGRTLAVYNIQ 234



 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 183 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLAVYNIQK 235

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 236 ESTLHLVL 243


>gi|224160432|ref|XP_002338212.1| predicted protein [Populus trichocarpa]
 gi|222871285|gb|EEF08416.1| predicted protein [Populus trichocarpa]
          Length = 377

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|248337|gb|AAB21993.1| polyubiquitin [Zea mays]
 gi|248339|gb|AAB21994.1| polyubiquitin [Zea mays]
 gi|33323474|gb|AAQ07454.1| ubiquitin [Musa acuminata]
 gi|52076878|dbj|BAD45891.1| polyubiquitin [Oryza sativa Japonica Group]
 gi|218198760|gb|EEC81187.1| hypothetical protein OsI_24193 [Oryza sativa Indica Group]
 gi|222636097|gb|EEE66229.1| hypothetical protein OsJ_22384 [Oryza sativa Japonica Group]
 gi|413926516|gb|AFW66448.1| ubiquitin2 [Zea mays]
 gi|413935667|gb|AFW70218.1| clone MubG1 ubiquitin [Zea mays]
          Length = 533

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 467 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 519

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 520 ESTLHLVL 527


>gi|30679945|ref|NP_851029.1| polyubiquitin 3 [Arabidopsis thaliana]
 gi|30679951|ref|NP_568112.2| polyubiquitin 3 [Arabidopsis thaliana]
 gi|79326803|ref|NP_001031824.1| polyubiquitin 3 [Arabidopsis thaliana]
 gi|122237441|sp|Q1EC66.1|UBQ3_ARATH RecName: Full=Polyubiquitin 3; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|7413601|emb|CAB86091.1| polyubiquitin (ubq3) [Arabidopsis thaliana]
 gi|9757775|dbj|BAB08384.1| polyubiquitin [Arabidopsis thaliana]
 gi|27311629|gb|AAO00780.1| polyubiquitin (UBQ3) [Arabidopsis thaliana]
 gi|108385299|gb|ABF85770.1| At5g03240 [Arabidopsis thaliana]
 gi|222423646|dbj|BAH19791.1| AT5G03240 [Arabidopsis thaliana]
 gi|332003191|gb|AED90574.1| polyubiquitin 3 [Arabidopsis thaliana]
 gi|332003192|gb|AED90575.1| polyubiquitin 3 [Arabidopsis thaliana]
 gi|332003193|gb|AED90576.1| polyubiquitin 3 [Arabidopsis thaliana]
          Length = 306

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290


>gi|297809725|ref|XP_002872746.1| hypothetical protein ARALYDRAFT_911794 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297809771|ref|XP_002872769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297318583|gb|EFH49005.1| hypothetical protein ARALYDRAFT_911794 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318606|gb|EFH49028.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 229

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPLDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|260600300|gb|ACX46987.1| ubiquitin [Guzmania wittmackii x Guzmania lingulata]
          Length = 441

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 291

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 292 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 335

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 336 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 366



 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   + Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPEQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 29/43 (67%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNG 44
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +G
Sbjct: 391 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 433


>gi|187729698|gb|ACD31680.1| ubiquitin [Gossypium hirsutum]
          Length = 305

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 140 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 183

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 184 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214



 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLPDY--------NIQ 290

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 291 KESTLHLVL 299


>gi|149391401|gb|ABR25718.1| polyubiquitin containing 7 ubiquitin monomers [Oryza sativa Indica
           Group]
          Length = 178

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 36  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 88

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 89  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 132

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 133 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 163


>gi|18803|emb|CAA40323.1| polyubiquitin protein [Helianthus annuus]
          Length = 334

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290


>gi|357475981|ref|XP_003608276.1| Ubiquitin [Medicago truncatula]
 gi|355509331|gb|AES90473.1| Ubiquitin [Medicago truncatula]
          Length = 533

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 391 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 443

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 444 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 487

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 488 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 518



 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 410

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TLA Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442


>gi|1800281|gb|AAB68045.1| polyubiquitin [Fragaria x ananassa]
          Length = 381

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIX 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|342298462|emb|CBY46745.1| polyubiquitin 10 protein [Lepidium appelianum]
          Length = 308

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 14  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 66

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 67  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 110

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 111 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 141



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 166 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 218

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 219 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 262

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 263 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 293


>gi|347968153|ref|XP_312337.4| AGAP002599-PA [Anopheles gambiae str. PEST]
 gi|333468138|gb|EAA08053.5| AGAP002599-PA [Anopheles gambiae str. PEST]
          Length = 305

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.1 bits (131), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLF 69
           +ES + L+ 
Sbjct: 291 KESPLHLVL 299


>gi|16660462|gb|AAL27564.1|AF429430_1 polyubiquitin OUB2 [Olea europaea]
          Length = 457

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442


>gi|399525602|gb|AFP44113.1| ubiquitin, partial [Lycoris longituba]
          Length = 187

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 14  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 66

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 67  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 110

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 111 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 141


>gi|226477452|emb|CAX72420.1| polyubiquitin [Schistosoma japonicum]
          Length = 268

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 25/116 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLGDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENV 254


>gi|90655082|gb|ABD96088.1| polyubiquitin [Malus x domestica]
          Length = 270

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 52  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 104

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 105 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 148

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 149 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 179



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 204 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 256

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 257 ESTLHLVL 264



 Score = 40.0 bits (92), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 40/123 (32%)

Query: 30  DIQDLFFAGDRLMNGRLIDYEDMALASPNVKRESTMQLLFCAIKVLSISVKAPSDDILKL 89
           D Q L FAG +L +GR        LA  N+++EST+ L+                  L+ 
Sbjct: 4   DQQRLIFAGKQLEDGR-------TLADYNIQKESTLHLVLR----------------LRG 40

Query: 90  KVKIFVKMLTEEIVKLKVKVLLTI-----------------RDLFCTGMKLKDCKTLACY 132
            ++IFVK LT + + L+V+   TI                 + L   G +L+D +TLA Y
Sbjct: 41  GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 100

Query: 133 GVK 135
            ++
Sbjct: 101 NIQ 103


>gi|164521185|gb|ABY60454.1| putative polyubiquitin [Adonis aestivalis var. palaestina]
          Length = 281

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 22  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 74

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 75  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 118

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 119 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 149



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 23/112 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 174 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 226

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 227 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 262


>gi|118370602|ref|XP_001018502.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300269|gb|EAR98257.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 228

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL++E S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDIEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + V L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTVTLDVEATDTIENIKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVESSDTIENIKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|302596001|sp|Q58G87.2|UBQ3_ORYSJ RecName: Full=Polyubiquitin 3; Contains: RecName:
           Full=Ubiquitin-related; Contains: RecName:
           Full=Ubiquitin; Flags: Precursor
 gi|39546234|emb|CAE04243.3| OSJNBa0089N06.4 [Oryza sativa Japonica Group]
 gi|125591721|gb|EAZ32071.1| hypothetical protein OsJ_16259 [Oryza sativa Japonica Group]
          Length = 381

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 140 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 183

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 184 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 291

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 292 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 335

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 336 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 366



 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|297810399|ref|XP_002873083.1| hypothetical protein ARALYDRAFT_487095 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318920|gb|EFH49342.1| hypothetical protein ARALYDRAFT_487095 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 306

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLTDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TLA Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|149391359|gb|ABR25697.1| polyubiquitin containing 7 ubiquitin monomers [Oryza sativa Indica
           Group]
          Length = 201

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 59  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 111

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 112 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 155

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 156 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 186



 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 42/133 (31%)

Query: 21  VHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQLLFCAIKVLSISV 79
           + +KEG   D Q L FAG +L +GR L DY        N+++EST+ L+           
Sbjct: 2   IQDKEGIPPDQQRLIFAGKQLEDGRTLXDY--------NIQKESTLHLVLR--------- 44

Query: 80  KAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-----------------RDLFCTGMK 122
                  L+  ++IFVK LT + + L+V+   TI                 + L   G +
Sbjct: 45  -------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ 97

Query: 123 LKDCKTLACYGVK 135
           L+D +TLA Y ++
Sbjct: 98  LEDGRTLADYNIQ 110


>gi|61223100|gb|AAX40652.1| polyubiquitin [Oryza sativa Japonica Group]
          Length = 381

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 140 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 183

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 184 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLVFAGKQLEDGR-------TLADYNIQK 291

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 292 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 335

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 336 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 366



 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|28436481|gb|AAO43307.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 250

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 31  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 83

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 84  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 127

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 128 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 158



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 183 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 235

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 236 ESTLHLVL 243


>gi|53850091|emb|CAH59740.1| polyubiquitin [Plantago major]
          Length = 305

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290


>gi|226469792|emb|CAX76726.1| polyubiquitin [Schistosoma japonicum]
          Length = 228

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT++L VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTISLEVEPSDTIENVKAKIPDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|195340400|ref|XP_002036801.1| GM12582 [Drosophila sechellia]
 gi|194130917|gb|EDW52960.1| GM12582 [Drosophila sechellia]
          Length = 321

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 74/146 (50%), Gaps = 30/146 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+   +  + I VK            PSD I  +K KI          + K  +
Sbjct: 63  KESTLHLVLRLLGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI----------QDKEGI 112

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVK 135
               + L   G +L+D +TL+ Y ++
Sbjct: 113 PPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|23397122|gb|AAN31845.1| putative polyubiquitin (UBQ10) [Arabidopsis thaliana]
          Length = 464

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 23/112 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 403


>gi|374073976|pdb|2Y5B|B Chain B, Structure Of Usp21 In Complex With Linear
           Diubiquitin-Aldehyde
 gi|374073978|pdb|2Y5B|F Chain F, Structure Of Usp21 In Complex With Linear
           Diubiquitin-Aldehyde
          Length = 152

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGHMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|164510214|emb|CAJ41447.1| polyubiquitin [Paralvinella grasslei]
          Length = 304

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLGDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     R L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQRRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 42/162 (25%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   +I +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDSIENVKTKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDDRGVACFIS 145
                       L   G +L+D +TL+ Y ++ +  +   +S
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLS 300


>gi|116312012|emb|CAJ86369.1| OSIGBa0117N13.13 [Oryza sativa Indica Group]
 gi|116312055|emb|CAJ86419.1| H0303G06.8 [Oryza sativa Indica Group]
 gi|125549841|gb|EAY95663.1| hypothetical protein OsI_17529 [Oryza sativa Indica Group]
          Length = 381

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|89891990|gb|ABD78847.1| ubiquitin C II [Anser anser]
          Length = 271

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 25/116 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENV 254



 Score = 35.4 bits (80), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 22/31 (70%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQ 32
           KT+TL VE S+TI+N+K  + +KEG   D Q
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 269


>gi|443713356|gb|ELU06246.1| hypothetical protein CAPTEDRAFT_186294 [Capitella teleta]
          Length = 231

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 9/67 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQL 67
           +EST+ L
Sbjct: 215 KESTLHL 221


>gi|374412404|gb|AEZ49160.1| polyubiquitin, partial [Wolffia australiana]
          Length = 281

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 31  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 83

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 84  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 127

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 128 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 158



 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 23/106 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 183 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 235

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKV 107
           EST+ L+                  L+  ++IFVK LT + + L+V
Sbjct: 236 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEV 265


>gi|115460714|ref|NP_001053957.1| Os04g0628100 [Oryza sativa Japonica Group]
 gi|113565528|dbj|BAF15871.1| Os04g0628100 [Oryza sativa Japonica Group]
          Length = 392

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 98  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 150

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 151 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 194

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 195 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 225



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 250 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 302

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 303 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 346

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 347 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 377



 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 22  KTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 74

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 75  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 118

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 119 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 149


>gi|426247176|ref|XP_004017362.1| PREDICTED: polyubiquitin-C-like isoform 2 [Ovis aries]
          Length = 310

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|4105408|gb|AAD02414.1| polyubiquitin [Schistosoma mansoni]
          Length = 295

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 2   KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 53

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 54  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 97

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 98  QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 129



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 154 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 205

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 206 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 249

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 250 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 281


>gi|223646966|gb|ACN10241.1| Ubiquitin [Salmo salar]
 gi|223672829|gb|ACN12596.1| Ubiquitin [Salmo salar]
          Length = 305

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 25/116 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENV 254



 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 9/68 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRL-MNGRLIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG     Q + FAG +    G L DY        N++
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPGQQRMIFAGKQPEEGGPLSDY--------NIQ 290

Query: 61  RESTMQLL 68
           +EST+ L 
Sbjct: 291 KESTLHLF 298


>gi|53850089|emb|CAH59739.1| polyubiquitin [Plantago major]
          Length = 232

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|224069394|ref|XP_002326346.1| predicted protein [Populus trichocarpa]
 gi|222833539|gb|EEE72016.1| predicted protein [Populus trichocarpa]
          Length = 306

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT   + L+V+   TI        
Sbjct: 140 ESTLHLVLR----------------LRGGMQIFVKTLTGNTITLEVESSDTIDNVKAKIQ 183

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 184 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214



 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVENSDTIDNVKVKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 291

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 292 ESTLHLVL 299


>gi|217074566|gb|ACJ85643.1| unknown [Medicago truncatula]
          Length = 229

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 140 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 183

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 184 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  +  KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQNKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|334186377|ref|NP_001190681.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|357512383|ref|XP_003626480.1| Ubiquitin-like protein [Medicago truncatula]
 gi|40287484|gb|AAR83856.1| hexameric polyubiquitin 6PU11 [Capsicum annuum]
 gi|147802377|emb|CAN77120.1| hypothetical protein VITISV_031666 [Vitis vinifera]
 gi|217074820|gb|ACJ85770.1| unknown [Medicago truncatula]
 gi|332657071|gb|AEE82471.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|355501495|gb|AES82698.1| Ubiquitin-like protein [Medicago truncatula]
 gi|388491722|gb|AFK33927.1| unknown [Medicago truncatula]
 gi|388492650|gb|AFK34391.1| unknown [Lotus japonicus]
 gi|399513944|gb|AFP43342.1| polyubiquitin [Arabidopsis thaliana]
          Length = 153

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|297841025|ref|XP_002888394.1| hexaubiquitin protein [Arabidopsis lyrata subsp. lyrata]
 gi|297334235|gb|EFH64653.1| hexaubiquitin protein [Arabidopsis lyrata subsp. lyrata]
          Length = 483

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442


>gi|4150914|emb|CAA72800.1| polyubiquitin precursor [Suberites domuncula]
          Length = 147

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 5   KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 56

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 57  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 100

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 101 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 132


>gi|209738556|gb|ACI70147.1| Ubiquitin [Salmo salar]
          Length = 381

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|197129059|gb|ACH45557.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
          Length = 190

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|35187449|gb|AAQ84316.1| fiber polyubiquitin [Gossypium barbadense]
          Length = 229

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 140 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 183

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 184 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|625174|gb|AAC84175.1| ubiquitin [Artemia franciscana]
          Length = 225

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 70  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 121

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 122 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 165

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 166 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 197



 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 42/145 (28%)

Query: 9   EKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQL 67
           E S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N+++EST+ L
Sbjct: 1   EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKESTLHL 52

Query: 68  LFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------------ 115
           +                  L+  ++IFVK LT + + L+V+   TI +            
Sbjct: 53  VLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 96

Query: 116 -----LFCTGMKLKDCKTLACYGVK 135
                L   G +L+D +TL+ Y ++
Sbjct: 97  PDQQRLIFAGKQLEDGRTLSDYNIQ 121


>gi|302393778|sp|P42739.2|UBIQP_ACECL RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related 1; Contains:
           RecName: Full=Ubiquitin-related 2; Flags: Precursor
 gi|433970|emb|CAA82268.1| polyubiquitin [Acetabularia peniculus]
          Length = 423

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+T++N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 128 KTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 180

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   T+ +      
Sbjct: 181 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQ 224

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 225 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 255



 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+T++N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 280 KTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 332

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   T+ +      
Sbjct: 333 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQ 376

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      +   G +L+D +TLA Y ++
Sbjct: 377 DKEGIPPDQQRIIFAGKQLEDGRTLADYNIQ 407



 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL V+ S+T++N+K  + +KEG   D Q L FAG +L +G       + LA  N+++
Sbjct: 52  KTITLEVQSSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDG-------LTLADYNIQK 104

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   T+ +      
Sbjct: 105 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQ 148

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 149 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 179



 Score = 38.5 bits (88), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 40/123 (32%)

Query: 30  DIQDLFFAGDRLMNGRLIDYEDMALASPNVKRESTMQLLFCAIKVLSISVKAPSDDILKL 89
           D Q L FAG +L +GR        LA  N+++EST+ L+                  L+ 
Sbjct: 4   DQQRLIFAGKQLEDGR-------TLADYNIQKESTLHLVLR----------------LRG 40

Query: 90  KVKIFVKMLTEEIVKLKVKVLLTIRD-----------------LFCTGMKLKDCKTLACY 132
            ++IFVK LT + + L+V+   T+ +                 L   G +L+D  TLA Y
Sbjct: 41  GMQIFVKTLTGKTITLEVQSSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLTLADY 100

Query: 133 GVK 135
            ++
Sbjct: 101 NIQ 103


>gi|344232965|gb|EGV64838.1| ubiquitin [Candida tenuis ATCC 10573]
          Length = 229

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|145352566|ref|XP_001420612.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580847|gb|ABO98905.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 381

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|93359417|gb|ABF13286.1| polyubiquitin [Anser anser]
          Length = 265

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 25/116 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST  L+                  L+  ++IFVK LT + + L+V+   TI ++
Sbjct: 215 KESTPHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENV 254


>gi|29836445|gb|AAM78180.1| putative polyubiquitin [Gossypium herbaceum]
 gi|29836447|gb|AAM78181.1| putative polyubiquitin [Gossypium raimondii]
 gi|29836449|gb|AAM78182.1| putative polyubiquitin [Gossypium barbadense]
 gi|29836451|gb|AAM78183.1| putative polyubiquitin [Gossypium barbadense]
 gi|29836453|gb|AAM78184.1| putative polyubiquitin [Gossypioides kirkii]
          Length = 204

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 62  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 114

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 115 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 158

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 159 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 189



 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 40/136 (29%)

Query: 17  LKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKRESTMQLLFCAIKVLS 76
           +K  + +KEG   D Q L FAG +L +GR        LA  N+++EST+ L+        
Sbjct: 1   VKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQKESTLHLVLR------ 47

Query: 77  ISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-----------------RDLFCT 119
                     L+  ++IFVK LT + + L+V+   TI                 + L   
Sbjct: 48  ----------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 97

Query: 120 GMKLKDCKTLACYGVK 135
           G +L+D +TLA Y ++
Sbjct: 98  GKQLEDGRTLADYNIQ 113


>gi|313215765|emb|CBY16339.1| unnamed protein product [Oikopleura dioica]
          Length = 188

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|270300599|gb|ACZ69386.1| polyubiquitin UBQ14 [Cucumis sativus]
          Length = 197

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 55  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 107

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 108 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 151

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 152 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 182



 Score = 45.1 bits (105), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 40/129 (31%)

Query: 24  KEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKRESTMQLLFCAIKVLSISVKAPS 83
           KEG   D Q L FAG +L +GR        LA  N+++EST+ L+               
Sbjct: 1   KEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQKESTLHLVLR------------- 40

Query: 84  DDILKLKVKIFVKMLTEEIVKLKVKVLLTI-----------------RDLFCTGMKLKDC 126
              L+  ++IFVK LT + + L+V+   TI                 + L   G +L+D 
Sbjct: 41  ---LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 97

Query: 127 KTLACYGVK 135
           +TLA Y ++
Sbjct: 98  RTLADYNIQ 106


>gi|413935668|gb|AFW70219.1| polyubiquitin-like protein [Zea mays]
          Length = 502

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 360 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 412

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 413 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 456

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 457 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 487


>gi|413926506|gb|AFW66438.1| putative ubiquitin family protein, partial [Zea mays]
 gi|413926515|gb|AFW66447.1| ubiquitin2, partial [Zea mays]
          Length = 349

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 208 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 260

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 261 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 304

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 305 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 335


>gi|356565543|ref|XP_003550999.1| PREDICTED: polyubiquitin-C-like [Glycine max]
          Length = 533

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   +I +      
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIE 411

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TL  Y ++
Sbjct: 412 EKEGIPPDQQRLIFAGKQLEDGRTLEDYEIQ 442



 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + EKEG   D Q L FAG +L +GR L DYE        ++
Sbjct: 391 KTITLEVESSDSIENVKAKIEEKEGIPPDQQRLIFAGKQLEDGRTLEDYE--------IQ 442

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 443 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKI 486

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL  Y ++
Sbjct: 487 QEKEGIPPDQQRLIFAGKQLEDERTLEDYDIQ 518


>gi|218198762|gb|EEC81189.1| hypothetical protein OsI_24195 [Oryza sativa Indica Group]
          Length = 223

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 81  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 133

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 134 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 177

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 178 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 208



 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 40/149 (26%)

Query: 4   VTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKRES 63
            T  VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++ES
Sbjct: 7   ATCEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQKES 59

Query: 64  TMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI---------- 113
           T+ L+                  L+  ++IFVK LT + + L+V+   TI          
Sbjct: 60  TLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK 103

Query: 114 -------RDLFCTGMKLKDCKTLACYGVK 135
                  + L   G +L+D +TLA Y ++
Sbjct: 104 EGIPPDQQRLIFAGKQLEDGRTLADYNIQ 132


>gi|290543384|ref|NP_001166536.1| polyubiquitin-B [Cavia porcellus]
 gi|302595872|sp|P0CG54.1|UBB_CAVPO RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|1197093|dbj|BAA11842.1| ubiquitin [Cavia porcellus]
          Length = 311

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|357137122|ref|XP_003570150.1| PREDICTED: polyubiquitin 11-like [Brachypodium distachyon]
          Length = 241

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|223646258|gb|ACN09887.1| Ubiquitin [Salmo salar]
 gi|223672105|gb|ACN12234.1| Ubiquitin [Salmo salar]
          Length = 191

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 49  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 100

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 101 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 144

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 145 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 178


>gi|1684855|gb|AAB36545.1| ubiquitin-like protein [Phaseolus vulgaris]
          Length = 407

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 113 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 165

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 166 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 209

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 210 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 240



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 265 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 317

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 318 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 361

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 362 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 392


>gi|140083661|gb|ABO84843.1| ubiquitin B [Sus scrofa]
          Length = 209

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 31/44 (70%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR 45
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 206


>gi|39939489|gb|AAR32784.1| polyubiquitin [Clusia minor]
          Length = 223

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 39  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 91

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 92  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 135

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 136 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 166


>gi|12851404|dbj|BAB29028.1| unnamed protein product [Mus musculus]
          Length = 305

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLGVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 182

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214



 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +G  L DY        N +
Sbjct: 11  KTITLEVEPSDTIENVKAKIRDKEGIPPDQQRLIFAGKQLEDGSTLSDY--------NNQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLGVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 291 KESTLHLVL 299


>gi|449266037|gb|EMC77164.1| Ubiquitin, partial [Columba livia]
          Length = 290

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|118370594|ref|XP_001018498.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300265|gb|EAR98253.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 304

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   +I +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDSIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|62079638|gb|AAX61165.1| ubiquitin [Oreochromis mossambicus]
          Length = 160

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEAFPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|378747684|gb|AFC36452.1| ubiquitin, partial [Anoectochilus roxburghii]
          Length = 214

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 42  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 94

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 95  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 138

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 139 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 169


>gi|290462837|gb|ADD24466.1| Ubiquitin [Lepeophtheirus salmonis]
          Length = 229

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|350537977|ref|NP_001232075.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
 gi|197129056|gb|ACH45554.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
          Length = 248

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|3603456|gb|AAC35858.1| polyubiquitin [Capsicum chinense]
          Length = 265

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 47  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 99

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 100 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 143

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 144 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 174



 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 199 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 251

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 252 ESTLHLVL 259


>gi|164430972|gb|ABY55758.1| ubiquitin [Drosophila silvestris]
          Length = 222

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 19  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 70

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 71  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 114

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 115 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 146



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDY 49
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY
Sbjct: 171 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 219


>gi|21428336|gb|AAM49828.1| GH17513p [Drosophila melanogaster]
          Length = 306

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|195469924|ref|XP_002099886.1| GE16472 [Drosophila yakuba]
 gi|194187410|gb|EDX00994.1| GE16472 [Drosophila yakuba]
          Length = 230

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|424513675|emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos]
          Length = 359

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 138 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 190

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 191 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 234

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 235 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 265



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 290 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 342

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 343 ESTLHLVL 350



 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 75/202 (37%), Gaps = 91/202 (45%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGT---------------------------------- 27
           KT+TL VE S+TI N+K  + +KEGT                                  
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGTFRVKSRRLKFCLLALLDSATTIESSLALRSKKSS 70

Query: 28  -----------------SEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKRESTMQLLFC 70
                              D Q L FAG +L +GR        LA  N+++EST+ L+  
Sbjct: 71  ERREREKESALSRARGIPPDQQRLIFAGKQLEDGR-------TLADYNIQKESTLHLVLR 123

Query: 71  AIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI----------------- 113
                           L+  ++IFVK LT + + L+V+   TI                 
Sbjct: 124 ----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 167

Query: 114 RDLFCTGMKLKDCKTLACYGVK 135
           + L   G +L+D +TLA Y ++
Sbjct: 168 QRLIFAGKQLEDGRTLADYNIQ 189


>gi|118370600|ref|XP_001018501.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300268|gb|EAR98256.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 228

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|49586|emb|CAA30815.1| unnamed protein product [Cricetulus sp.]
          Length = 223

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|356545971|ref|XP_003541406.1| PREDICTED: polyubiquitin-like [Glycine max]
          Length = 269

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 50  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 102

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 103 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 146

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 147 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 177



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 202 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 254

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 255 ESTLHLVL 262


>gi|226477468|emb|CAX72428.1| ubiquitin C [Schistosoma japonicum]
          Length = 229

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLPLVL 223


>gi|118370596|ref|XP_001018499.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300266|gb|EAR98254.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 228

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL++E S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDIEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + V L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTVTLDVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KTVTL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTVTLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L ++   TI +     
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDIEASDTIENVKAKI 182

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214


>gi|29612653|gb|AAH49473.1| Zgc:172187 protein [Danio rerio]
          Length = 480

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 33  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 84

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 85  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 128

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 129 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 160



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 236

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 237 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 280

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 281 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 312



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 337 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 388

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 389 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 432

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 433 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 464


>gi|405978203|gb|EKC42613.1| Ubiquitin [Crassostrea gigas]
          Length = 222

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 4   KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 55

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 56  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 99

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 100 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 131



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 156 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 207

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 208 KESTLHLVL 216


>gi|256072199|ref|XP_002572424.1| ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
 gi|164510084|emb|CAJ32646.1| ubiquitin [Xantho incisus]
 gi|226473060|emb|CAX71216.1| polyubiquitin [Schistosoma japonicum]
          Length = 228

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|148237866|ref|NP_001079589.1| Polyubiquitin-C-like [Xenopus laevis]
 gi|27924422|gb|AAH45004.1| MGC53081 protein [Xenopus laevis]
 gi|226469790|emb|CAX76725.1| ubiquitin C [Schistosoma japonicum]
 gi|226473054|emb|CAX71213.1| ubiquitin C [Schistosoma japonicum]
          Length = 380

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|268571891|ref|XP_002641176.1| C. briggsae CBR-UBQ-1 protein [Caenorhabditis briggsae]
          Length = 762

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 619 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 670

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 671 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 714

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 715 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 746


>gi|213510698|ref|NP_001133175.1| polyubiquitin [Salmo salar]
 gi|350534516|ref|NP_001232808.1| uncharacterized protein LOC100228572 [Taeniopygia guttata]
 gi|118098426|ref|XP_415105.2| PREDICTED: polyubiquitin-B isoform 2 [Gallus gallus]
 gi|118098428|ref|XP_001233377.1| PREDICTED: polyubiquitin-B isoform 1 [Gallus gallus]
 gi|432884643|ref|XP_004074520.1| PREDICTED: polyubiquitin-B-like isoform 1 [Oryzias latipes]
 gi|432884645|ref|XP_004074521.1| PREDICTED: polyubiquitin-B-like isoform 2 [Oryzias latipes]
 gi|432884647|ref|XP_004074522.1| PREDICTED: polyubiquitin-B-like isoform 3 [Oryzias latipes]
 gi|432884649|ref|XP_004074523.1| PREDICTED: polyubiquitin-B-like isoform 4 [Oryzias latipes]
 gi|449476588|ref|XP_004176460.1| PREDICTED: polyubiquitin-B [Taeniopygia guttata]
 gi|104829|pir||S13928 ubiquitin precursor - chicken
 gi|533889|gb|AAA29362.1| polyubiquitin [Anopheles gambiae]
 gi|197129058|gb|ACH45556.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
 gi|197632335|gb|ACH70891.1| polyubiquitin [Salmo salar]
 gi|223647274|gb|ACN10395.1| Ubiquitin [Salmo salar]
 gi|223673153|gb|ACN12758.1| Ubiquitin [Salmo salar]
 gi|449279318|gb|EMC86953.1| Ubiquitin [Columba livia]
          Length = 229

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|358332080|dbj|GAA27344.2| polyubiquitin-A [Clonorchis sinensis]
          Length = 288

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 147 KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 198

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 199 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 242

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 243 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 276



 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 71  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 122

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 123 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKAKI 166

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 167 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 200


>gi|307006571|gb|ADN23570.1| ubiquitin [Hyalomma marginatum rufipes]
          Length = 275

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 57  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 108

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 109 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 152

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 153 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 184



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 209 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLPDY--------NIQ 260

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 261 KESTLHLVL 269



 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 42/132 (31%)

Query: 22  HEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQLLFCAIKVLSISVK 80
            +KEG   D Q L FAG +L +GR L DY        N+++EST+ L+            
Sbjct: 1   QDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKESTLHLVLR---------- 42

Query: 81  APSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD-----------------LFCTGMKL 123
                 L+  ++IFVK LT + + L+V+   TI +                 L   G +L
Sbjct: 43  ------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 96

Query: 124 KDCKTLACYGVK 135
           +D +TL+ Y ++
Sbjct: 97  EDGRTLSDYNIQ 108


>gi|156552611|ref|XP_001599434.1| PREDICTED: polyubiquitin-A-like isoform 1 [Nasonia vitripennis]
 gi|345487600|ref|XP_003425726.1| PREDICTED: polyubiquitin-A-like isoform 2 [Nasonia vitripennis]
          Length = 913

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 619 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 670

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 671 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 714

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 715 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 746



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 771 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 822

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 823 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 866

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 867 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 898


>gi|156482|gb|AAA28154.1| polyubiquitin [Caenorhabditis elegans]
          Length = 838

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 619 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 670

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 671 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 714

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 715 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 746



 Score = 55.1 bits (131), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 771 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 822

Query: 61  RESTMQLLF 69
           ++ST+ L+ 
Sbjct: 823 KQSTLHLVL 831


>gi|402586659|gb|EJW80596.1| polyubiquitin, partial [Wuchereria bancrofti]
          Length = 198

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 56  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 107

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 108 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 151

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 152 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 183



 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 42/131 (32%)

Query: 23  EKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQLLFCAIKVLSISVKA 81
           +KEG   D Q L FAG +L +GR L DY        N+++EST+ L+             
Sbjct: 1   DKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKESTLHLVLR----------- 41

Query: 82  PSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD-----------------LFCTGMKLK 124
                L+  ++IFVK LT + + L+V+   TI +                 L   G +L+
Sbjct: 42  -----LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 96

Query: 125 DCKTLACYGVK 135
           D +TL+ Y ++
Sbjct: 97  DGRTLSDYNIQ 107


>gi|353231251|emb|CCD77669.1| putative ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
          Length = 379

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 161 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 212

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 213 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 256

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 257 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 288



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 313 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 364

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 365 KESTLHLVL 373


>gi|308497342|ref|XP_003110858.1| CRE-UBQ-1 protein [Caenorhabditis remanei]
 gi|308242738|gb|EFO86690.1| CRE-UBQ-1 protein [Caenorhabditis remanei]
          Length = 920

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 625 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 676

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 677 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 720

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 721 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 752



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 777 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 828

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 829 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 872

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 873 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 904



 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 48/158 (30%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL---- 116
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++    
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 562

Query: 117 -------------------FCTGMKLKDCKTLACYGVK 135
                               C   +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKNNCERKQLEDGRTLSDYNIQ 600


>gi|289740633|gb|ADD19064.1| ubiquitin/40S ribosomal protein S27a fusion protein [Glossina
           morsitans morsitans]
          Length = 229

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|410914740|ref|XP_003970845.1| PREDICTED: polyubiquitin-B-like isoform 1 [Takifugu rubripes]
 gi|410914742|ref|XP_003970846.1| PREDICTED: polyubiquitin-B-like isoform 2 [Takifugu rubripes]
 gi|221222312|gb|ACM09817.1| Ubiquitin [Salmo salar]
 gi|334362439|gb|AEG78418.1| Ubiquitin C variant 2 [Epinephelus coioides]
          Length = 305

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|195435796|ref|XP_002065865.1| GK20481 [Drosophila willistoni]
 gi|194161950|gb|EDW76851.1| GK20481 [Drosophila willistoni]
          Length = 611

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594


>gi|346986309|ref|NP_001231310.1| polyubiquitin [Cricetulus griseus]
 gi|2118958|pir||S21083 polyubiquitin 5 - Chinese hamster
 gi|49477|emb|CAA42941.1| polyubiquitin [Cricetulus griseus]
 gi|25991946|gb|AAN76999.1| poly-ubiquitin [Biomphalaria glabrata]
          Length = 381

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|388516797|gb|AFK46460.1| unknown [Medicago truncatula]
          Length = 153

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|332023427|gb|EGI63670.1| Ubiquitin [Acromyrmex echinatior]
          Length = 534

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 519 KESTLHLVL 527


>gi|228311825|pdb|2W9N|A Chain A, Crystal Structure Of Linear Di-Ubiquitin
          Length = 152

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|242021992|ref|XP_002431426.1| ubiquitin, putative [Pediculus humanus corporis]
 gi|212516707|gb|EEB18688.1| ubiquitin, putative [Pediculus humanus corporis]
          Length = 844

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 468 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 519

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 520 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 563

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 564 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 595



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 620 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 671

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 672 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 715

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 716 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 747



 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 772 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 823

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 824 KESTLHLVL 832


>gi|19698797|gb|AAL91109.1| ubiquitin [Onchocerca volvulus]
          Length = 305

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|158753|gb|AAA28997.1| ubiquitin [Drosophila melanogaster]
          Length = 231

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|25151716|ref|NP_741157.1| Protein UBQ-1, isoform a [Caenorhabditis elegans]
 gi|302595957|sp|P0CG71.1|UBIQ1_CAEEL RecName: Full=Polyubiquitin-A; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related; Flags:
           Precursor
 gi|373219552|emb|CCD68779.1| Protein UBQ-1, isoform a [Caenorhabditis elegans]
          Length = 838

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 619 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 670

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 671 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 714

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 715 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 746



 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK L  + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLIGKTITLEVEASDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 771 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 822

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 823 KESTLHLVL 831


>gi|372467011|pdb|3U30|A Chain A, Crystal Structure Of A Linear-Specific Ubiquitin Fab Bound
           To Linear Ubiquitin
 gi|372467014|pdb|3U30|D Chain D, Crystal Structure Of A Linear-Specific Ubiquitin Fab Bound
           To Linear Ubiquitin
          Length = 172

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 31  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 82

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 83  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 126

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 127 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 158


>gi|307193107|gb|EFN76024.1| Ubiquitin [Harpegnathos saltator]
          Length = 229

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|226473056|emb|CAX71214.1| polyubiquitin [Schistosoma japonicum]
          Length = 304

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 30/146 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIPDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K KI          + K  +
Sbjct: 215 KESTLHLVLRFRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI----------QDKEGI 264

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVK 135
               + L   G +L+D +TL+ Y ++
Sbjct: 265 PPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 291 KESTLHLVL 299


>gi|209875527|ref|XP_002139206.1| ubiquitin family protein [Cryptosporidium muris RN66]
 gi|209554812|gb|EEA04857.1| ubiquitin family protein [Cryptosporidium muris RN66]
          Length = 155

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 51/168 (30%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD---------RGVAC 142
                       L   G +L+D +TL+ Y ++ +         RG +C
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGSC 154


>gi|195491528|ref|XP_002093599.1| GE18016 [Drosophila yakuba]
 gi|194179700|gb|EDW93311.1| GE18016 [Drosophila yakuba]
          Length = 317

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|156358391|ref|XP_001624503.1| predicted protein [Nematostella vectensis]
 gi|156211288|gb|EDO32403.1| predicted protein [Nematostella vectensis]
          Length = 229

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q   FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|110736490|dbj|BAF00213.1| polyubiquitin 4 UBQ4 [Arabidopsis thaliana]
          Length = 351

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 208 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 260

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 261 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 304

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 305 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 335


>gi|302595967|sp|P0CG82.1|UBIQP_TETPY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|578547|emb|CAA43387.1| ubiquitin [Tetrahymena pyriformis]
          Length = 381

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|28436483|gb|AAO43308.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 250

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 31  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 83

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 84  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 127

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 128 DKEWIPPDQQRLIFAGKQLEDGRTLADYNIQ 158



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KE    D Q L FAG +L +GR        LA  N+++
Sbjct: 107 KTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 159

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 160 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 203

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 204 DKEGIPPDQQRLIFAGKQLEDGRTLAVYNIQ 234



 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 183 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLAVYNIQK 235

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 236 ESTLHLVL 243


>gi|357611679|gb|EHJ67605.1| Ubc protein [Danaus plexippus]
          Length = 381

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|350416822|ref|XP_003491120.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-A-like [Bombus
           impatiens]
          Length = 611

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 44/154 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEG--TSEDIQDLFFAGDRLMNGR-LIDYEDMALASPN 58
           KT+TL VE S+TI+N+K  + +KEG   S D Q L FAG +L +GR L DY        N
Sbjct: 467 KTITLEVEASDTIENVKAKIQDKEGIPRSPDQQRLIFAGKQLEDGRTLSDY--------N 518

Query: 59  VKRESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD--- 115
           +++EST+ L+                  L+  ++IFVK LT + + L+V+   TI +   
Sbjct: 519 IQKESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKA 562

Query: 116 --------------LFCTGMKLKDCKTLACYGVK 135
                         L   G +L+D +TL+ Y ++
Sbjct: 563 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 596



 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 545 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 596

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 597 KESTLHLVL 605


>gi|307206691|gb|EFN84646.1| Ubiquitin [Harpegnathos saltator]
          Length = 686

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594



 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 619 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 670

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 671 KESTLHLVL 679


>gi|226469794|emb|CAX76727.1| polyubiquitin [Schistosoma japonicum]
 gi|226473062|emb|CAX71217.1| polyubiquitin [Schistosoma japonicum]
 gi|226473066|emb|CAX71219.1| polyubiquitin [Schistosoma japonicum]
          Length = 304

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|157420221|gb|ABV55648.1| Ubc protein, partial [Penaeus monodon]
          Length = 432

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 62  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 113

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 114 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 157

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 158 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 189



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 214 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 265

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 266 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 309

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 310 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 341



 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 366 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 417

Query: 61  RESTMQLLF 69
           +E T+ L+ 
Sbjct: 418 KEFTLHLVL 426



 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 42/137 (30%)

Query: 17  LKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQLLFCAIKVL 75
           +K  + +KEG   D Q L FAG +L +GR L DY        N+++EST+ L+       
Sbjct: 1   VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKESTLHLVLR----- 47

Query: 76  SISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD-----------------LFC 118
                      L+  ++IFVK LT + + L+V+   TI +                 L  
Sbjct: 48  -----------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 96

Query: 119 TGMKLKDCKTLACYGVK 135
            G +L+D +TL+ Y ++
Sbjct: 97  AGKQLEDGRTLSDYNIQ 113


>gi|225715800|gb|ACO13746.1| Ubiquitin [Esox lucius]
          Length = 229

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 182

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+T++N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTVENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|195403389|ref|XP_002060272.1| GJ16068 [Drosophila virilis]
 gi|194140611|gb|EDW57085.1| GJ16068 [Drosophila virilis]
          Length = 384

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292


>gi|73995130|ref|XP_853060.1| PREDICTED: polyubiquitin-C isoform 2 [Canis lupus familiaris]
 gi|149633339|ref|XP_001509120.1| PREDICTED: polyubiquitin-C [Ornithorhynchus anatinus]
 gi|194214411|ref|XP_001499132.2| PREDICTED: polyubiquitin [Equus caballus]
 gi|297263837|ref|XP_002798872.1| PREDICTED: hypothetical protein LOC712934 isoform 3 [Macaca
           mulatta]
 gi|344297276|ref|XP_003420325.1| PREDICTED: polyubiquitin-C-like [Loxodonta africana]
 gi|345791301|ref|XP_003433478.1| PREDICTED: polyubiquitin-C isoform 1 [Canis lupus familiaris]
 gi|390468353|ref|XP_003733926.1| PREDICTED: polyubiquitin-C-like [Callithrix jacchus]
 gi|343958420|dbj|BAK63065.1| ubiquitin [Pan troglodytes]
 gi|343959062|dbj|BAK63386.1| ubiquitin [Pan troglodytes]
 gi|431912123|gb|ELK14261.1| Ubiquitin [Pteropus alecto]
          Length = 381

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|340058|gb|AAA36787.1| ubiquitin precursor, partial [Homo sapiens]
          Length = 269

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 51  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 102

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 103 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 146

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 147 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 178



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 203 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 254

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 255 KESTLHLVL 263



 Score = 39.3 bits (90), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 42/124 (33%)

Query: 30  DIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQLLFCAIKVLSISVKAPSDDILK 88
           D Q L FAG +L +GR L DY        N+++EST+ L+                  L+
Sbjct: 3   DQQRLIFAGKQLEDGRTLSDY--------NIQKESTLHLVLR----------------LR 38

Query: 89  LKVKIFVKMLTEEIVKLKVKVLLTIRD-----------------LFCTGMKLKDCKTLAC 131
             ++IFVK LT + + L+V+   TI +                 L   G +L+D +TL+ 
Sbjct: 39  GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 98

Query: 132 YGVK 135
           Y ++
Sbjct: 99  YNIQ 102


>gi|66510555|ref|XP_393173.2| PREDICTED: polyubiquitin-A-like isoform 1 [Apis mellifera]
 gi|328780726|ref|XP_003249849.1| PREDICTED: polyubiquitin-A-like [Apis mellifera]
          Length = 761

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 619 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 670

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 671 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 714

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 715 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 746



 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKTKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594


>gi|302393783|sp|P59669.2|UBIQP_GEOCY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related; Flags:
           Precursor
 gi|11154|emb|CAA50268.1| ubiquitin [Geodia cydonium]
          Length = 457

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442


>gi|393912432|gb|EJD76736.1| polyubiquitin, variant 1 [Loa loa]
          Length = 381

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|390176272|ref|XP_003736175.1| GA30006 [Drosophila pseudoobscura pseudoobscura]
 gi|388858740|gb|EIM52248.1| GA30006 [Drosophila pseudoobscura pseudoobscura]
          Length = 687

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 670

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 671 KESTLHLVL 679


>gi|307174680|gb|EFN65063.1| Ubiquitin [Camponotus floridanus]
          Length = 154

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|226469788|emb|CAX76724.1| polyubiquitin [Schistosoma japonicum]
          Length = 304

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K    +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKTQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 291 KESTLHLVL 299


>gi|229577230|ref|NP_001153331.1| ubiquitin C-like [Nasonia vitripennis]
          Length = 610

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594


>gi|185135461|ref|NP_001117778.1| polyubiquitin [Oncorhynchus mykiss]
 gi|157110833|ref|XP_001651266.1| ubiquitin [Aedes aegypti]
 gi|13991678|gb|AAK51460.1|AF361365_1 polyubiquitin [Oncorhynchus mykiss]
 gi|108883867|gb|EAT48092.1| AAEL000795-PA [Aedes aegypti]
 gi|209149518|gb|ACI32978.1| Ubiquitin [Salmo salar]
 gi|209737152|gb|ACI69445.1| Ubiquitin [Salmo salar]
          Length = 305

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|4150912|emb|CAA72799.1| polyubiquitin precursor [Suberites domuncula]
          Length = 381

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|6007448|gb|AAF00920.1|AF188158_1 ubiquitin [Oxytricha trifallax]
 gi|403333775|gb|EJY66009.1| Putative ubiquitin C variant 2 [Oxytricha trifallax]
          Length = 229

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|403338482|gb|EJY68482.1| Putative ubiquitin C variant 2 [Oxytricha trifallax]
          Length = 228

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|324514657|gb|ADY45941.1| Polyubiquitin-A, partial [Ascaris suum]
          Length = 474

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 25/116 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENV 406



 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 30/114 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG       L DY        N+++
Sbjct: 391 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGT------LSDY--------NIQK 436

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +
Sbjct: 437 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIEN 474


>gi|225733991|pdb|2ZVN|A Chain A, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
           Space Group
 gi|225733992|pdb|2ZVN|G Chain G, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
           Space Group
 gi|225733995|pdb|2ZVN|C Chain C, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
           Space Group
 gi|225733996|pdb|2ZVN|E Chain E, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
           Space Group
 gi|225733999|pdb|2ZVO|A Chain A, Nemo Cozi Domain In Complex With Diubiquitin In C2 Space
           Group
 gi|225734000|pdb|2ZVO|G Chain G, Nemo Cozi Domain In Complex With Diubiquitin In C2 Space
           Group
 gi|374074071|pdb|3AXC|A Chain A, Crystal Structure Of Linear Diubiquitin
          Length = 154

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 13  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 64

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 65  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 108

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 109 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 140


>gi|118370590|ref|XP_001018496.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|118370606|ref|XP_001018504.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300263|gb|EAR98251.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
 gi|89300271|gb|EAR98259.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 304

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|297809843|ref|XP_002872805.1| hypothetical protein ARALYDRAFT_490270 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318642|gb|EFH49064.1| hypothetical protein ARALYDRAFT_490270 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 309

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 23/112 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 251


>gi|226484061|emb|CAX79699.1| ubiquitin C [Schistosoma japonicum]
          Length = 305

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 75/146 (51%), Gaps = 30/146 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K KI  K   E I   + +V
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK---EGIPPDQQRV 271

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVK 135
           +         G +L+D +TL+ Y ++
Sbjct: 272 IF-------AGKQLEDGRTLSDYNIQ 290


>gi|402888113|ref|XP_003907421.1| PREDICTED: polyubiquitin-C isoform 11 [Papio anubis]
 gi|402888115|ref|XP_003907422.1| PREDICTED: polyubiquitin-C isoform 12 [Papio anubis]
 gi|426374649|ref|XP_004054182.1| PREDICTED: polyubiquitin-B-like isoform 1 [Gorilla gorilla gorilla]
 gi|426374651|ref|XP_004054183.1| PREDICTED: polyubiquitin-B-like isoform 2 [Gorilla gorilla gorilla]
 gi|426374653|ref|XP_004054184.1| PREDICTED: polyubiquitin-B-like isoform 3 [Gorilla gorilla gorilla]
 gi|426374655|ref|XP_004054185.1| PREDICTED: polyubiquitin-B-like isoform 4 [Gorilla gorilla gorilla]
 gi|426374657|ref|XP_004054186.1| PREDICTED: polyubiquitin-B-like isoform 5 [Gorilla gorilla gorilla]
 gi|426374659|ref|XP_004054187.1| PREDICTED: polyubiquitin-B-like isoform 6 [Gorilla gorilla gorilla]
 gi|426374661|ref|XP_004054188.1| PREDICTED: polyubiquitin-B-like isoform 7 [Gorilla gorilla gorilla]
 gi|426374663|ref|XP_004054189.1| PREDICTED: polyubiquitin-B-like isoform 8 [Gorilla gorilla gorilla]
 gi|426374665|ref|XP_004054190.1| PREDICTED: polyubiquitin-B-like isoform 9 [Gorilla gorilla gorilla]
 gi|15928840|gb|AAH14880.1| UBC protein [Homo sapiens]
          Length = 305

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|7267292|emb|CAB81074.1| polyubiquitin (ubq10) [Arabidopsis thaliana]
          Length = 464

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 23/112 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 403


>gi|67616274|ref|XP_667472.1| ubiquitin B [Cryptosporidium hominis TU502]
 gi|54658618|gb|EAL37248.1| ubiquitin B [Cryptosporidium hominis]
          Length = 229

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|384371341|gb|ABF06579.2| polyubiquitin, partial [Gladiolus grandiflorus]
          Length = 162

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|361130305|pdb|3B08|A Chain A, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
           Linear Di- Ubiquitin
 gi|361130307|pdb|3B08|D Chain D, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
           Linear Di- Ubiquitin
 gi|361130309|pdb|3B08|G Chain G, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
           Linear Di- Ubiquitin
 gi|361130311|pdb|3B08|J Chain J, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
           Linear Di- Ubiquitin
 gi|361130437|pdb|3B0A|A Chain A, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
           Linear Di- Ubiquitin
 gi|361130439|pdb|3B0A|D Chain D, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
           Linear Di- Ubiquitin
          Length = 152

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|357498825|ref|XP_003619701.1| Ubiquitin-like protein [Medicago truncatula]
 gi|355494716|gb|AES75919.1| Ubiquitin-like protein [Medicago truncatula]
          Length = 290

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 224 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 276

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 277 ESTLHLVL 284



 Score = 43.5 bits (101), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 55/151 (36%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE+               G   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVER---------------GYPPDQQRLIFAGKQLEDGR-------TLADYNIQK 200

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 201 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 244

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 245 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 275


>gi|328780728|ref|XP_003249850.1| PREDICTED: polyubiquitin-A-like [Apis mellifera]
          Length = 685

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKTKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 543 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 594

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 595 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 638

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 639 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 670



 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594


>gi|294887015|ref|XP_002771956.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
 gi|239875778|gb|EER03772.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
          Length = 230

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|4150898|emb|CAA76577.1| polyubiquitin [Suberites domuncula]
          Length = 305

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|18044723|gb|AAH19850.1| Ubiquitin B [Mus musculus]
          Length = 305

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQHRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|118358270|ref|XP_001012381.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|118364888|ref|XP_001015665.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|1778712|gb|AAC47430.1| polyubiquitin [Tetrahymena thermophila]
 gi|89294148|gb|EAR92136.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
 gi|89297432|gb|EAR95420.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 381

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|389608337|dbj|BAM17780.1| ubiquitin [Papilio xuthus]
          Length = 306

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|358336555|dbj|GAA55031.1| ubiquitin C [Clonorchis sinensis]
          Length = 228

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|340374850|ref|XP_003385950.1| PREDICTED: polyubiquitin-like [Amphimedon queenslandica]
          Length = 381

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|226473064|emb|CAX71218.1| polyubiquitin [Schistosoma japonicum]
          Length = 194

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140


>gi|237842873|ref|XP_002370734.1| polyubiquitin, putative [Toxoplasma gondii ME49]
 gi|211968398|gb|EEB03594.1| polyubiquitin, putative [Toxoplasma gondii ME49]
 gi|221485709|gb|EEE23990.1| polyubiquitin, putative [Toxoplasma gondii GT1]
 gi|221502923|gb|EEE28633.1| polyubiquitin, putative [Toxoplasma gondii VEG]
          Length = 307

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|195011548|ref|XP_001983203.1| GH15714 [Drosophila grimshawi]
 gi|193896685|gb|EDV95551.1| GH15714 [Drosophila grimshawi]
          Length = 535

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 519 KESTLHLVL 527


>gi|291413653|ref|XP_002723083.1| PREDICTED: ubiquitin B [Oryctolagus cuniculus]
 gi|55977015|gb|AAV68344.1| ubiquitin C splice variant [Homo sapiens]
 gi|357610605|gb|EHJ67056.1| putative ubiquitin C variant 2 [Danaus plexippus]
          Length = 229

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|403330856|gb|EJY64339.1| Putative ubiquitin C variant 2 [Oxytricha trifallax]
          Length = 304

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|334324804|ref|XP_001373422.2| PREDICTED: polyubiquitin-C-like [Monodelphis domestica]
          Length = 761

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 670

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 671 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 714

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 715 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 746


>gi|308512652|gb|ADO32981.1| polyubiquitin [Eriocheir sinensis]
 gi|325556934|gb|ADZ28743.1| ubiquitin C [Eriocheir sinensis]
          Length = 305

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|226484872|emb|CAX79713.1| ubiquitin C [Schistosoma japonicum]
          Length = 305

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       +   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRMIFAGKQLEDGRTLSDYNIQ 290


>gi|47682711|gb|AAH69831.1| Zgc:172187 protein [Danio rerio]
 gi|62530956|gb|AAH93444.1| Zgc:172187 protein [Danio rerio]
          Length = 624

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 25  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 76

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 77  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 120

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 121 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 152



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 177 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 228

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 229 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 272

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 273 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 304



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 329 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 380

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 381 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 424

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 425 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 456



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 481 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 532

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 533 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 576

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 577 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 608


>gi|12833702|dbj|BAB22630.1| unnamed protein product [Mus musculus]
          Length = 229

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|302393782|sp|P23324.2|UBIQP_EUPEU RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|159038|gb|AAA62225.1| ubiquitin [Euplotes eurystomus]
          Length = 229

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE+S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEQSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE+S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|340727978|ref|XP_003402310.1| PREDICTED: polyubiquitin-B-like isoform 1 [Bombus terrestris]
 gi|340727980|ref|XP_003402311.1| PREDICTED: polyubiquitin-B-like isoform 2 [Bombus terrestris]
 gi|340727982|ref|XP_003402312.1| PREDICTED: polyubiquitin-B-like isoform 3 [Bombus terrestris]
          Length = 229

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|226477466|emb|CAX72427.1| polyubiquitin [Schistosoma japonicum]
          Length = 170

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|226477454|emb|CAX72421.1| ubiquitin C [Schistosoma japonicum]
 gi|226477456|emb|CAX72422.1| ubiquitin C [Schistosoma japonicum]
 gi|226477458|emb|CAX72423.1| ubiquitin C [Schistosoma japonicum]
 gi|226477460|emb|CAX72424.1| ubiquitin C [Schistosoma japonicum]
 gi|226477462|emb|CAX72425.1| ubiquitin C [Schistosoma japonicum]
 gi|226477464|emb|CAX72426.1| ubiquitin C [Schistosoma japonicum]
 gi|226484015|emb|CAX79676.1| ubiquitin C [Schistosoma japonicum]
 gi|226484017|emb|CAX79677.1| ubiquitin C [Schistosoma japonicum]
 gi|226484019|emb|CAX79678.1| ubiquitin C [Schistosoma japonicum]
 gi|226484021|emb|CAX79679.1| ubiquitin C [Schistosoma japonicum]
 gi|226484023|emb|CAX79680.1| ubiquitin C [Schistosoma japonicum]
 gi|226484027|emb|CAX79682.1| ubiquitin C [Schistosoma japonicum]
 gi|226484029|emb|CAX79683.1| ubiquitin C [Schistosoma japonicum]
 gi|226484031|emb|CAX79684.1| ubiquitin C [Schistosoma japonicum]
 gi|226484033|emb|CAX79685.1| ubiquitin C [Schistosoma japonicum]
 gi|226484035|emb|CAX79686.1| ubiquitin C [Schistosoma japonicum]
 gi|226484037|emb|CAX79687.1| ubiquitin C [Schistosoma japonicum]
 gi|226484039|emb|CAX79688.1| ubiquitin C [Schistosoma japonicum]
 gi|226484041|emb|CAX79689.1| ubiquitin C [Schistosoma japonicum]
 gi|226484043|emb|CAX79690.1| ubiquitin C [Schistosoma japonicum]
 gi|226484045|emb|CAX79691.1| ubiquitin C [Schistosoma japonicum]
 gi|226484049|emb|CAX79693.1| ubiquitin C [Schistosoma japonicum]
 gi|226484051|emb|CAX79694.1| ubiquitin C [Schistosoma japonicum]
 gi|226484053|emb|CAX79695.1| ubiquitin C [Schistosoma japonicum]
 gi|226484081|emb|CAX79709.1| ubiquitin C [Schistosoma japonicum]
 gi|443725027|gb|ELU12769.1| hypothetical protein CAPTEDRAFT_192594 [Capitella teleta]
          Length = 229

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|256079432|ref|XP_002575991.1| ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
          Length = 153

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|124805744|ref|XP_001350526.1| polyubiquitin [Plasmodium falciparum 3D7]
 gi|6138833|emb|CAB59728.1| Polyubiquitin [Plasmodium falciparum 3D7]
 gi|23496650|gb|AAN36206.1| polyubiquitin [Plasmodium falciparum 3D7]
          Length = 381

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|302143596|emb|CBI22349.3| unnamed protein product [Vitis vinifera]
          Length = 298

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 38  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 90

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 91  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 134

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 135 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 165



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 37/144 (25%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 190 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 242

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDLFCTGM 121
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++     
Sbjct: 243 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK-- 284

Query: 122 KLKDCKTLACYGVKDDRGVACFIS 145
                       ++D  G+  FIS
Sbjct: 285 ------------IQDKEGMQIFIS 296


>gi|223646702|gb|ACN10109.1| Ubiquitin [Salmo salar]
 gi|223672553|gb|ACN12458.1| Ubiquitin [Salmo salar]
          Length = 305

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|350537349|ref|NP_001232755.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
 gi|326929576|ref|XP_003210936.1| PREDICTED: polyubiquitin-like [Meleagris gallopavo]
 gi|197129060|gb|ACH45558.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
 gi|225708456|gb|ACO10074.1| Ubiquitin [Osmerus mordax]
          Length = 153

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|339233010|ref|XP_003381622.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979542|gb|EFV62324.1| ubiquitin family protein [Trichinella spiralis]
          Length = 277

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR++ DY        N++
Sbjct: 87  KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRMLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKI 182

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 216



 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+KG + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDSIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D + L+ Y ++ +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRMLSDYNIQKE 140



 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+KG + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|195164963|ref|XP_002023315.1| GL20284 [Drosophila persimilis]
 gi|194105420|gb|EDW27463.1| GL20284 [Drosophila persimilis]
          Length = 382

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|302595966|sp|P0CG83.1|UBIQP_HORVU RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|755763|emb|CAA27751.1| unnamed protein product [Hordeum vulgare subsp. vulgare]
          Length = 171

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 29  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 81

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 82  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 125

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 126 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 156


>gi|82512|pir||PS0380 ubiquitin precursor - rice (fragment)
 gi|218189|dbj|BAA02241.1| poly-ubiquitin [Oryza sativa Japonica Group]
          Length = 189

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 47  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 99

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 100 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 143

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 144 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 174


>gi|357513727|ref|XP_003627152.1| Ubiquitin [Medicago truncatula]
 gi|355521174|gb|AET01628.1| Ubiquitin [Medicago truncatula]
          Length = 270

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 41/134 (30%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDLFCTGM 121
           EST+ L+                  L+  ++IFVK LT + +                  
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTI------------------ 241

Query: 122 KLKDCKTLACYGVK 135
            L+D +TLA Y ++
Sbjct: 242 TLEDGRTLADYNIQ 255


>gi|226477448|emb|CAX72418.1| ubiquitin C [Schistosoma japonicum]
 gi|226484005|emb|CAX79671.1| ubiquitin C [Schistosoma japonicum]
          Length = 381

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|110671522|gb|ABG82012.1| putative ubiquitin B [Diaphorina citri]
 gi|387019647|gb|AFJ51941.1| putative ubiquitin B [Crotalus adamanteus]
          Length = 229

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|630479|pir||S43306 polyubiquitin 6 - Geodia cydonium
          Length = 448

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 44/152 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 161 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 212

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +E T+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 213 KE-TLHLVR-----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 254

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 255 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 286



 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 44/152 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 310 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 361

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +E T+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 362 KE-TLHLVR-----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 403

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 404 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 435


>gi|395517134|ref|XP_003762737.1| PREDICTED: polyubiquitin-B-like [Sarcophilus harrisii]
          Length = 305

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D     FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQXXXIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 291 KESTLHLVL 299


>gi|324509924|gb|ADY44155.1| Polyubiquitin-A, partial [Ascaris suum]
          Length = 626

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 28  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 79

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 80  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 123

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 124 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 155



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 180 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 231

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 232 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 275

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 276 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 307



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 332 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 383

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 384 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 427

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 428 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 459



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 484 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 535

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 536 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 579

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 580 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 611


>gi|307172602|gb|EFN63961.1| Ubiquitin [Camponotus floridanus]
          Length = 459

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442


>gi|226477470|emb|CAX72429.1| ubiquitin C [Schistosoma japonicum]
 gi|226477472|emb|CAX72430.1| ubiquitin C [Schistosoma japonicum]
 gi|226477474|emb|CAX72431.1| ubiquitin C [Schistosoma japonicum]
 gi|226477476|emb|CAX72432.1| ubiquitin C [Schistosoma japonicum]
 gi|226477478|emb|CAX72433.1| ubiquitin C [Schistosoma japonicum]
 gi|226477480|emb|CAX72434.1| ubiquitin C [Schistosoma japonicum]
 gi|226484001|emb|CAX79669.1| ubiquitin C [Schistosoma japonicum]
 gi|226484003|emb|CAX79670.1| ubiquitin C [Schistosoma japonicum]
 gi|226484055|emb|CAX79696.1| ubiquitin C [Schistosoma japonicum]
 gi|226484057|emb|CAX79697.1| ubiquitin C [Schistosoma japonicum]
 gi|226484059|emb|CAX79698.1| ubiquitin C [Schistosoma japonicum]
 gi|226484063|emb|CAX79700.1| ubiquitin C [Schistosoma japonicum]
 gi|226484065|emb|CAX79701.1| ubiquitin C [Schistosoma japonicum]
 gi|226484067|emb|CAX79702.1| ubiquitin C [Schistosoma japonicum]
 gi|226484069|emb|CAX79703.1| ubiquitin C [Schistosoma japonicum]
 gi|226484071|emb|CAX79704.1| ubiquitin C [Schistosoma japonicum]
 gi|226484073|emb|CAX79705.1| ubiquitin C [Schistosoma japonicum]
 gi|226484075|emb|CAX79706.1| ubiquitin C [Schistosoma japonicum]
 gi|226484077|emb|CAX79707.1| ubiquitin C [Schistosoma japonicum]
 gi|226484079|emb|CAX79708.1| ubiquitin C [Schistosoma japonicum]
 gi|226484083|emb|CAX79710.1| ubiquitin C [Schistosoma japonicum]
 gi|226484311|emb|CAX79711.1| ubiquitin C [Schistosoma japonicum]
 gi|226484870|emb|CAX79712.1| ubiquitin C [Schistosoma japonicum]
          Length = 305

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|326931517|ref|XP_003211875.1| PREDICTED: polyubiquitin-B-like isoform 1 [Meleagris gallopavo]
 gi|326931519|ref|XP_003211876.1| PREDICTED: polyubiquitin-B-like isoform 2 [Meleagris gallopavo]
 gi|149052896|gb|EDM04713.1| rCG34296, isoform CRA_a [Rattus norvegicus]
 gi|149052897|gb|EDM04714.1| rCG34296, isoform CRA_a [Rattus norvegicus]
 gi|344245202|gb|EGW01306.1| Ubiquitin [Cricetulus griseus]
          Length = 153

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|30060222|gb|AAP13102.1| polyubiquitin, partial [Schistosoma japonicum]
          Length = 340

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|327291982|ref|XP_003230699.1| PREDICTED: polyubiquitin-C-like [Anolis carolinensis]
          Length = 685

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 670

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 671 KESTLHLVL 679


>gi|444434917|dbj|BAM77033.1| ubiquitin C [Homo sapiens]
          Length = 685

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPCDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 670

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 671 KESTLHLVL 679


>gi|6755919|ref|NP_035794.1| polyubiquitin-B [Mus musculus]
 gi|20302085|ref|NP_620250.1| polyubiquitin-B precursor [Rattus norvegicus]
 gi|147904884|ref|NP_001090433.1| uncharacterized protein LOC779345 [Xenopus laevis]
 gi|302595873|sp|P0CG62.1|UBB_CHICK RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595876|sp|P0CG49.1|UBB_MOUSE RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595879|sp|P0CG51.1|UBB_RAT RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|2118966|pir||I50437 polyubiquitin 4 - chicken
 gi|55118|emb|CAA35999.1| ubiquitin [Mus musculus]
 gi|212849|gb|AAA49128.1| ubiquitin I [Gallus gallus]
 gi|471156|dbj|BAA03983.1| polyubiquitin [Rattus norvegicus]
 gi|12840717|dbj|BAB24930.1| unnamed protein product [Mus musculus]
 gi|12845838|dbj|BAB26919.1| unnamed protein product [Mus musculus]
 gi|12846202|dbj|BAB27071.1| unnamed protein product [Mus musculus]
 gi|12850137|dbj|BAB28606.1| unnamed protein product [Mus musculus]
 gi|37805416|gb|AAH60312.1| Ubiquitin B [Rattus norvegicus]
 gi|47477820|gb|AAH70919.1| Ubiquitin B [Rattus norvegicus]
 gi|71682472|gb|AAI00342.1| Ubiquitin B [Mus musculus]
 gi|74210110|dbj|BAE21330.1| unnamed protein product [Mus musculus]
 gi|89891988|gb|ABD78846.1| ubiquitin C I [Anser anser]
 gi|116487680|gb|AAI26016.1| MGC154789 protein [Xenopus laevis]
 gi|148678404|gb|EDL10351.1| mCG23377, isoform CRA_a [Mus musculus]
 gi|197693972|gb|ACH71654.1| ubiquitin C [Columba livia]
          Length = 305

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|226484007|emb|CAX79672.1| ubiquitin C [Schistosoma japonicum]
          Length = 381

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYHIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|393912430|gb|EJD76734.1| polyubiquitin, variant 2 [Loa loa]
          Length = 322

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 28  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 79

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 80  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 123

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 124 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 155



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 180 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 231

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 232 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 275

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 276 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 307


>gi|332021030|gb|EGI61419.1| Ubiquitin [Acromyrmex echinatior]
          Length = 459

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442


>gi|156087036|ref|XP_001610925.1| polyubiquitin [Babesia bovis T2Bo]
 gi|154798178|gb|EDO07357.1| polyubiquitin, putative [Babesia bovis]
          Length = 233

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|149535948|ref|XP_001508553.1| PREDICTED: polyubiquitin-C-like [Ornithorhynchus anatinus]
 gi|149641796|ref|XP_001508904.1| PREDICTED: polyubiquitin-C-like [Ornithorhynchus anatinus]
 gi|301770987|ref|XP_002920911.1| PREDICTED: hypothetical protein LOC100483436 isoform 1 [Ailuropoda
           melanoleuca]
 gi|301770989|ref|XP_002920912.1| PREDICTED: hypothetical protein LOC100483436 isoform 2 [Ailuropoda
           melanoleuca]
 gi|197129062|gb|ACH45560.1| putative ubiquitin C variant 7 [Taeniopygia guttata]
 gi|197129063|gb|ACH45561.1| putative ubiquitin C variant 7 [Taeniopygia guttata]
          Length = 381

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|157671923|ref|NP_062613.3| polyubiquitin-C [Mus musculus]
 gi|342187094|sp|P0CG50.2|UBC_MOUSE RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related 1; Contains:
           RecName: Full=Ubiquitin-related 2; Flags: Precursor
          Length = 734

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594



 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 25/114 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 670

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIR 114
           +EST+ L+                  L+  ++IFVK LT + + L V+  +T +
Sbjct: 671 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSVTTK 708


>gi|37595366|gb|AAQ94569.1| ubiquitin C [Danio rerio]
          Length = 235

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 9/81 (11%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKA 81
           +EST+ L+      + I VK 
Sbjct: 215 KESTLHLVLRLRGGMQIFVKT 235


>gi|8394502|ref|NP_059010.1| polyubiquitin-C precursor [Rattus norvegicus]
 gi|81872124|sp|Q63429.1|UBC_RAT RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related; Flags:
           Precursor
 gi|471154|dbj|BAA04129.1| polyubiquitin [Rattus norvegicus]
          Length = 810

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 670

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 671 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 714

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 715 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 746


>gi|449479809|ref|XP_004177054.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-C-like [Taeniopygia
           guttata]
          Length = 534

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 316 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 367

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 368 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 411

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 412 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 443



 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 35/160 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF-----CAI-------KVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK 108
           +EST+ L+      C +       K +++ V+  SD I  +K KI          + K  
Sbjct: 215 KESTLHLVLRLRGGCXVLPLCMTGKTITLEVEL-SDTIENVKAKI----------QDKEG 263

Query: 109 VLLTIRDLFCTGMKLKDCKTLACYGVKDDRGVACFISDIC 148
           +    R L   G +L+D +T + Y ++    VA   + +C
Sbjct: 264 IPPDSRXLIFAGKQLEDGRTFSDYNIQK---VAVAETSVC 300



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 468 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 519

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 520 KESTLHLVL 528


>gi|386278574|gb|AFJ04519.1| ubiquitin, partial [Vernicia fordii]
          Length = 176

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 34  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 86

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 87  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 130

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 131 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 161


>gi|312080345|ref|XP_003142560.1| ubiquitin C II [Loa loa]
 gi|393912431|gb|EJD76735.1| polyubiquitin [Loa loa]
          Length = 398

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 28  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 79

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 80  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 123

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 124 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 155



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 180 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 231

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 232 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 275

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 276 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 307



 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 332 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 383

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 384 KESTLHLVL 392


>gi|117558776|gb|AAI27396.1| Zgc:153686 [Danio rerio]
          Length = 533

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 519 KESTLHLVL 527


>gi|350537449|ref|NP_001232759.1| putative ubiquitin C variant 5 [Taeniopygia guttata]
 gi|350537609|ref|NP_001232766.1| putative ubiquitin C variant 14 [Taeniopygia guttata]
 gi|291404973|ref|XP_002718831.1| PREDICTED: ubiquitin B-like [Oryctolagus cuniculus]
 gi|344297907|ref|XP_003420637.1| PREDICTED: polyubiquitin-B-like [Loxodonta africana]
 gi|410979979|ref|XP_003996358.1| PREDICTED: polyubiquitin-B isoform 1 [Felis catus]
 gi|410979981|ref|XP_003996359.1| PREDICTED: polyubiquitin-B isoform 2 [Felis catus]
 gi|302595871|sp|P0CG53.1|UBB_BOVIN RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|89994036|gb|AAI14002.1| Polyubiquitin [Bos taurus]
 gi|197129050|gb|ACH45548.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
 gi|197129061|gb|ACH45559.1| putative ubiquitin C variant 5 [Taeniopygia guttata]
 gi|197129064|gb|ACH45562.1| putative ubiquitin C variant 9 [Taeniopygia guttata]
 gi|197129068|gb|ACH45566.1| putative ubiquitin C variant 14 [Taeniopygia guttata]
 gi|296476687|tpg|DAA18802.1| TPA: polyubiquitin [Bos taurus]
          Length = 305

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|58618886|gb|AAH89218.1| Ubc protein, partial [Rattus norvegicus]
          Length = 656

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 9   KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 60

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 61  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 104

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 105 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 136



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 161 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 212

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 213 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 256

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 257 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 288



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 313 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 364

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 365 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 408

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 409 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 440



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 465 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 516

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 517 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 560

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 561 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 592


>gi|71534894|gb|AAZ32851.1| pentameric polyubiquitin [Medicago sativa]
          Length = 189

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 33  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 85

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 86  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 129

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 130 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 160


>gi|403221030|dbj|BAM39163.1| ubiquitin [Theileria orientalis strain Shintoku]
          Length = 155

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|357016993|gb|AET50525.1| hypothetical protein [Eimeria tenella]
          Length = 153

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|226484009|emb|CAX79673.1| ubiquitin C [Schistosoma japonicum]
 gi|226484011|emb|CAX79674.1| ubiquitin C [Schistosoma japonicum]
 gi|226484013|emb|CAX79675.1| ubiquitin C [Schistosoma japonicum]
          Length = 153

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|195170771|ref|XP_002026185.1| GL16204 [Drosophila persimilis]
 gi|194111065|gb|EDW33108.1| GL16204 [Drosophila persimilis]
          Length = 307

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|104303708|gb|ABF66639.1| ubiquitin [Pelophylax nigromaculatus]
          Length = 305

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|51873890|gb|AAH80583.1| Unknown (protein for IMAGE:2822684), partial [Homo sapiens]
          Length = 698

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 24  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 75

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 76  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 119

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 120 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 151



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 176 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 227

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 228 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 271

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 272 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 303



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 328 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 379

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 380 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 423

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 424 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 455



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 480 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 531

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 532 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 575

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 576 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 607



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 632 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 683

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 684 KESTLHLVL 692


>gi|18256864|gb|AAH21837.1| Ubc protein [Mus musculus]
          Length = 658

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594


>gi|302393781|sp|P62976.2|UBIQP_CRIGR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related 1; Contains:
           RecName: Full=Ubiquitin-related 2; Flags: Precursor
 gi|940395|dbj|BAA09853.1| polyubiquitin [Cricetulus sp.]
          Length = 658

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKQGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594



 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 25/114 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +K+G   D Q L FAG +L +GR L DY        N++
Sbjct: 543 KTITLEVEPSDTIENVKAKIQDKQGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 594

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIR 114
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI+
Sbjct: 595 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSNTIK 632


>gi|2627131|dbj|BAA23487.1| polyubiquitin [Cricetulus griseus]
          Length = 886

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 670

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 671 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 714

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 715 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 746



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 25/114 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 771 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 822

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIR 114
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI+
Sbjct: 823 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSNTIK 860


>gi|339232992|ref|XP_003381613.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979552|gb|EFV62333.1| ubiquitin family protein [Trichinella spiralis]
          Length = 193

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+KG + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDSIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D + L+ Y ++ +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRMLSNYNIQKE 140



 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR+       L++ N+++
Sbjct: 87  KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRM-------LSNYNIQK 139

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 140 ESTLHLVL 147


>gi|13879398|gb|AAH06680.1| Ubc protein [Mus musculus]
          Length = 582

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 25/114 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIR 114
           +EST+ L+                  L+  ++IFVK LT + + L V+  +T +
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSVTTK 556


>gi|19698785|gb|AAL91103.1| ubiquitin [Acanthocheilonema viteae]
          Length = 258

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 40  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 91

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 92  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 135

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 136 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 169



 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 192 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 243

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 244 KESTLHLVL 252


>gi|294891345|ref|XP_002773533.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
 gi|239878705|gb|EER05349.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
          Length = 458

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442


>gi|126352454|ref|NP_001075331.1| ubiquitin C [Equus caballus]
 gi|302393801|sp|Q8MKD1.3|UBB_HORSE RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related; Flags:
           Precursor
 gi|21070215|gb|AAM34211.1|AF506969_1 ubiquitin [Equus caballus]
          Length = 305

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q   FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 291 KESTLHLVL 299


>gi|164708|gb|AAA31133.1| poly-ubiquitin precursor, partial [Sus scrofa]
          Length = 255

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 37  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 88

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 89  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 132

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 133 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 164



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 189 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 240

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 241 KESTLHLVL 249


>gi|73695428|gb|AAI03478.1| Ubc protein [Rattus norvegicus]
          Length = 430

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 25/108 (23%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK 108
           +EST+ L+                  L+  ++IFVK LT + + L V+
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVE 398


>gi|328792775|ref|XP_395993.4| PREDICTED: polyubiquitin-A-like isoform 1 [Apis mellifera]
          Length = 795

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594



 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 619 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 670

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 671 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 714

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL  Y ++
Sbjct: 715 QDKEGIPPDQQRLIFAGKQLEDGRTLLDYNIQ 746


>gi|254802948|gb|ACT82769.1| polyubiquitin [Nicotiana tabacum]
          Length = 188

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 33  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 85

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 86  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 129

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 130 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 160


>gi|197129067|gb|ACH45565.1| putative ubiquitin C variant 12 [Taeniopygia guttata]
          Length = 381

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDKQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|163573|gb|AAA30719.1| polyubiquitin, partial [Bos taurus]
          Length = 245

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 22  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 73

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 74  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 117

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 118 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 151



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 174 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 225

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 226 KESTLHLVL 234


>gi|73955934|ref|XP_536651.2| PREDICTED: polyubiquitin-B isoform 1 [Canis lupus familiaris]
 gi|345800303|ref|XP_003434677.1| PREDICTED: polyubiquitin-B [Canis lupus familiaris]
          Length = 229

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|355568283|gb|EHH24564.1| Polyubiquitin-C [Macaca mulatta]
          Length = 229

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|57163957|ref|NP_001009202.1| polyubiquitin-B [Ovis aries]
 gi|302595880|sp|P0CG55.1|UBB_SHEEP RecName: Full=Polyubiquitin-B; Contains: RecName:
           Full=Ubiquitin-related; Contains: RecName:
           Full=Ubiquitin; Flags: Precursor
 gi|2707837|gb|AAB92373.1| polyubiquitin [Ovis aries]
          Length = 305

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 30/146 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K KI          + K  +
Sbjct: 63  KESTLHLVLRMRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI----------QDKEGI 112

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVK 135
               + L   G +L+D +TL+ Y ++
Sbjct: 113 PPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|27734357|gb|AAM51207.1| polyubiquitin [Cercomonas edax]
 gi|27734367|gb|AAM51212.1| polyubiquitin [Cercomonas edax]
          Length = 177

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 46/155 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 4   KTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 56

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK----VKIFVKMLTEEIVKLKVKVLLTIRD-- 115
           EST+ L                  +L+L+    ++IFVK LT + + L V+   TI +  
Sbjct: 57  ESTLHL------------------VLRLRGGSGMQIFVKTLTGKTITLDVESSDTIENVK 98

Query: 116 ---------------LFCTGMKLKDCKTLACYGVK 135
                          L   G +L+D +TLA Y ++
Sbjct: 99  QKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 133


>gi|82622379|gb|ABB86777.1| unknown [Theileria lestoquardi]
          Length = 159

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDEEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|195137906|ref|XP_002012597.1| GI14272 [Drosophila mojavensis]
 gi|193906411|gb|EDW05278.1| GI14272 [Drosophila mojavensis]
          Length = 668

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594


>gi|54610299|gb|AAV35212.1| polyubiquitin-like protein [Schistosoma japonicum]
          Length = 156

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 14  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 65

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 66  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 109

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 110 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 141


>gi|71033201|ref|XP_766242.1| ubiquitin [Theileria parva strain Muguga]
 gi|68353199|gb|EAN33959.1| ubiquitin, putative [Theileria parva]
          Length = 155

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|84998672|ref|XP_954057.1| ubiquitin [Theileria annulata]
 gi|65305055|emb|CAI73380.1| ubiquitin, putative [Theileria annulata]
          Length = 159

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|324525469|gb|ADY48551.1| Polyubiquitin, partial [Ascaris suum]
          Length = 263

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L+DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 30/146 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD +  +K KI          + K  +
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKAKI----------QDKEGI 188

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVK 135
               + L   G +L+D +TL+ Y ++
Sbjct: 189 PPDQQRLIFAGKQLEDDRTLSDYNIQ 214


>gi|221048065|gb|ACL98140.1| ubiquitin C variant [Epinephelus coioides]
          Length = 255

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 25/116 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENV 254


>gi|197129053|gb|ACH45551.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
          Length = 305

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 182

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214



 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNG-RLIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +G R  DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRRRADY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 291 KESTLHLVL 299


>gi|27734361|gb|AAM51209.1| polyubiquitin [Cercomonas edax]
          Length = 177

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 46/155 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 4   KTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 56

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK----VKIFVKMLTEEIVKLKVKVLLTIRD-- 115
           EST+ L                  +L+L+    ++IFVK LT + + L V+   TI +  
Sbjct: 57  ESTLHL------------------VLRLRGGSGMQIFVKTLTGKTITLDVESSDTIENVK 98

Query: 116 ---------------LFCTGMKLKDCKTLACYGVK 135
                          L   G +L+D +TLA Y ++
Sbjct: 99  QKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 133


>gi|19483857|gb|AAH25894.1| Ubc protein [Mus musculus]
 gi|23958188|gb|AAH36303.1| Ubc protein [Mus musculus]
 gi|26372121|dbj|BAB27296.2| unnamed protein product [Mus musculus]
 gi|62825885|gb|AAH94012.1| Ubc protein [Mus musculus]
          Length = 354

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292


>gi|5523979|gb|AAD44042.1|AF104025_1 polyprotein [Bovine viral diarrhea virus 2]
          Length = 432

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 234 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 285

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 286 KESTLHLVL----------------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 329

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 330 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 363


>gi|452824412|gb|EME31415.1| ubiquitin [Galdieria sulphuraria]
          Length = 229

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|212851|gb|AAA49129.1| ubiquitin polyprotein (heat shock related), partial [Gallus gallus]
          Length = 157

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 15  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 66

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 67  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 110

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 111 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 142


>gi|256079430|ref|XP_002575990.1| ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
          Length = 349

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 55  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 106

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 107 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 150

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 151 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 184



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 207 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 258

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 259 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 302

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 303 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 336


>gi|325302882|tpg|DAA34473.1| TPA_exp: ubiquitin [Amblyomma variegatum]
          Length = 241

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 12  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 63

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 64  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 107

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 108 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 139



 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 9/67 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 164 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 215

Query: 61  RESTMQL 67
           +EST+ L
Sbjct: 216 KESTLHL 222


>gi|294942504|ref|XP_002783557.1| Ubiquitin D, putative [Perkinsus marinus ATCC 50983]
 gi|239896054|gb|EER15353.1| Ubiquitin D, putative [Perkinsus marinus ATCC 50983]
          Length = 163

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|452820028|gb|EME27076.1| ubiquitin [Galdieria sulphuraria]
          Length = 306

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|302393789|sp|P62972.2|UBIQP_XENLA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|2118960|pir||I51568 polyubiquitin - African clawed frog (fragment)
 gi|214864|gb|AAA49978.1| polyubiquitin, partial [Xenopus laevis]
          Length = 167

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 26  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 77

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 78  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 121

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 122 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 155


>gi|320163196|gb|EFW40095.1| polyubiquitin 5 [Capsaspora owczarzaki ATCC 30864]
          Length = 228

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVESSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|197129055|gb|ACH45553.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
 gi|197129057|gb|ACH45555.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
          Length = 412

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 43.9 bits (102), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 27/42 (64%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMN 43
           +T+TL VE S+TI+N+K  + +KEG   D Q L FAG   M 
Sbjct: 315 RTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGSWRMG 356


>gi|221059958|ref|XP_002260624.1| ubiquitin [Plasmodium knowlesi strain H]
 gi|193810698|emb|CAQ42596.1| ubiquitin, putative [Plasmodium knowlesi strain H]
          Length = 609

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVESSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVESSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVESSDTIENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVESSDTIENVKAKI 562

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594


>gi|61369554|gb|AAX43350.1| ubiquitin B [synthetic construct]
          Length = 230

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|149063232|gb|EDM13555.1| rCG21222, isoform CRA_a [Rattus norvegicus]
 gi|149063234|gb|EDM13557.1| rCG21222, isoform CRA_a [Rattus norvegicus]
          Length = 278

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 25/108 (23%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK 108
           +EST+ L+                  L+  ++IFVK LT + + L V+
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVE 246


>gi|5912028|emb|CAB55973.1| hypothetical protein [Homo sapiens]
          Length = 239

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 21  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 72

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 73  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 116

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 117 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 148



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 173 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 224

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 225 KESTLHLVL 233


>gi|11024714|ref|NP_061828.1| polyubiquitin-B precursor [Homo sapiens]
 gi|57114099|ref|NP_001009117.1| polyubiquitin-B [Pan troglodytes]
 gi|157427740|ref|NP_001098779.1| ubiquitin [Sus scrofa]
 gi|302563653|ref|NP_001181737.1| polyubiquitin-B [Macaca mulatta]
 gi|109113442|ref|XP_001087796.1| PREDICTED: ubiquitin D-like isoform 1 [Macaca mulatta]
 gi|109113444|ref|XP_001088043.1| PREDICTED: ubiquitin D-like isoform 3 [Macaca mulatta]
 gi|109113446|ref|XP_001087919.1| PREDICTED: ubiquitin D-like isoform 2 [Macaca mulatta]
 gi|296201638|ref|XP_002748114.1| PREDICTED: polyubiquitin-B-like isoform 1 [Callithrix jacchus]
 gi|296201640|ref|XP_002748115.1| PREDICTED: polyubiquitin-B-like isoform 2 [Callithrix jacchus]
 gi|296201642|ref|XP_002748116.1| PREDICTED: polyubiquitin-B-like isoform 3 [Callithrix jacchus]
 gi|297272002|ref|XP_002800358.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
 gi|297272004|ref|XP_002800359.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
 gi|297272006|ref|XP_002800360.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
 gi|297272009|ref|XP_002800361.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
 gi|297700142|ref|XP_002827118.1| PREDICTED: polyubiquitin-B isoform 2 [Pongo abelii]
 gi|301617759|ref|XP_002938289.1| PREDICTED: ubiquitin D isoform 1 [Xenopus (Silurana) tropicalis]
 gi|301617761|ref|XP_002938290.1| PREDICTED: ubiquitin D isoform 2 [Xenopus (Silurana) tropicalis]
 gi|332226973|ref|XP_003262663.1| PREDICTED: polyubiquitin-B isoform 2 [Nomascus leucogenys]
 gi|332267429|ref|XP_003282687.1| PREDICTED: polyubiquitin-B-like isoform 2 [Nomascus leucogenys]
 gi|332267433|ref|XP_003282689.1| PREDICTED: polyubiquitin-B-like isoform 4 [Nomascus leucogenys]
 gi|348560904|ref|XP_003466253.1| PREDICTED: polyubiquitin-B-like [Cavia porcellus]
 gi|390463130|ref|XP_003732975.1| PREDICTED: polyubiquitin-B-like [Callithrix jacchus]
 gi|395748608|ref|XP_003778797.1| PREDICTED: polyubiquitin-B [Pongo abelii]
 gi|426349328|ref|XP_004042260.1| PREDICTED: polyubiquitin-B isoform 1 [Gorilla gorilla gorilla]
 gi|426349330|ref|XP_004042261.1| PREDICTED: polyubiquitin-B isoform 2 [Gorilla gorilla gorilla]
 gi|426349332|ref|XP_004042262.1| PREDICTED: polyubiquitin-B isoform 3 [Gorilla gorilla gorilla]
 gi|426349334|ref|XP_004042263.1| PREDICTED: polyubiquitin-B isoform 4 [Gorilla gorilla gorilla]
 gi|426349336|ref|XP_004042264.1| PREDICTED: polyubiquitin-B isoform 5 [Gorilla gorilla gorilla]
 gi|426349338|ref|XP_004042265.1| PREDICTED: polyubiquitin-B isoform 6 [Gorilla gorilla gorilla]
 gi|426349340|ref|XP_004042266.1| PREDICTED: polyubiquitin-B isoform 7 [Gorilla gorilla gorilla]
 gi|441661901|ref|XP_004091551.1| PREDICTED: polyubiquitin-B [Nomascus leucogenys]
 gi|441661906|ref|XP_004091552.1| PREDICTED: polyubiquitin-B [Nomascus leucogenys]
 gi|441661909|ref|XP_004091553.1| PREDICTED: polyubiquitin-B [Nomascus leucogenys]
 gi|441678730|ref|XP_004092833.1| PREDICTED: polyubiquitin-B-like [Nomascus leucogenys]
 gi|441678733|ref|XP_004092834.1| PREDICTED: polyubiquitin-B-like [Nomascus leucogenys]
 gi|441678738|ref|XP_004092835.1| PREDICTED: polyubiquitin-B-like [Nomascus leucogenys]
 gi|302595874|sp|P0CG67.1|UBB_GORGO RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595875|sp|P0CG47.1|UBB_HUMAN RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595877|sp|P0CG65.1|UBB_PANTR RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595878|sp|P0CG60.1|UBB_PONPY RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|6647298|emb|CAA28495.1| ubiquitin [Homo sapiens]
 gi|12653221|gb|AAH00379.1| Ubiquitin B [Homo sapiens]
 gi|14424552|gb|AAH09301.1| Ubiquitin B [Homo sapiens]
 gi|15451313|dbj|BAB64460.1| hypothetical protein [Macaca fascicularis]
 gi|15929389|gb|AAH15127.1| Ubiquitin B [Homo sapiens]
 gi|20070823|gb|AAH26301.1| Ubiquitin B [Homo sapiens]
 gi|21410249|gb|AAH31027.1| Ubiquitin B [Homo sapiens]
 gi|28278206|gb|AAH46123.1| Ubiquitin B [Homo sapiens]
 gi|28316344|dbj|BAC56955.1| polyubiquitin B [Homo sapiens]
 gi|28316346|dbj|BAC56956.1| polyubiquitin B [Pongo pygmaeus]
 gi|28316348|dbj|BAC56957.1| polyubiquitin B [Pan troglodytes]
 gi|28316350|dbj|BAC56958.1| polyubiquitin B [Gorilla gorilla]
 gi|54697070|gb|AAV38907.1| ubiquitin B [Homo sapiens]
 gi|54887368|gb|AAH38999.1| Ubiquitin B [Homo sapiens]
 gi|61355410|gb|AAX41137.1| ubiquitin B [synthetic construct]
 gi|61359496|gb|AAX41727.1| ubiquitin B [synthetic construct]
 gi|119624906|gb|EAX04501.1| ubiquitin B, isoform CRA_a [Homo sapiens]
 gi|119624907|gb|EAX04502.1| ubiquitin B, isoform CRA_a [Homo sapiens]
 gi|156105183|gb|ABU49130.1| ubiquitin B [Sus scrofa]
 gi|156105185|gb|ABU49131.1| ubiquitin B [Sus scrofa]
 gi|281339566|gb|EFB15150.1| hypothetical protein PANDA_009728 [Ailuropoda melanoleuca]
 gi|343958162|dbj|BAK62936.1| ubiquitin [Pan troglodytes]
          Length = 229

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|38114661|gb|AAH08955.2| UBC protein, partial [Homo sapiens]
          Length = 546

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 24  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 75

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 76  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 119

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 120 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 151



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 176 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 227

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 228 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 271

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 272 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 303



 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 328 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 379

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 380 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 423

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 424 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 455



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 480 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 531

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 532 KESTLHLVL 540


>gi|74214198|dbj|BAE40351.1| unnamed protein product [Mus musculus]
          Length = 278

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 25/114 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIR 114
           +EST+ L+                  L+  ++IFVK LT + + L V+  +T +
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSVTTK 252


>gi|27806505|ref|NP_776558.1| polyubiquitin-B [Bos taurus]
 gi|645|emb|CAA79146.1| polyubiquitin [Bos taurus]
          Length = 305

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL  Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLFDYNIQ 138


>gi|324525461|gb|ADY48550.1| Polyubiquitin, partial [Ascaris suum]
          Length = 263

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L+DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 30/146 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD +  +K KI          + K  +
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKAKI----------QDKEGI 188

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVK 135
               + L   G +L+D +TL+ Y ++
Sbjct: 189 PPDQQRLIFAGKQLEDDRTLSDYNIQ 214


>gi|302796783|ref|XP_002980153.1| hypothetical protein SELMODRAFT_271419 [Selaginella moellendorffii]
 gi|302820321|ref|XP_002991828.1| hypothetical protein SELMODRAFT_162003 [Selaginella moellendorffii]
 gi|300140366|gb|EFJ07090.1| hypothetical protein SELMODRAFT_162003 [Selaginella moellendorffii]
 gi|300152380|gb|EFJ19023.1| hypothetical protein SELMODRAFT_271419 [Selaginella moellendorffii]
          Length = 306

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290


>gi|281203713|gb|EFA77909.1| ubiquitin/ribosomal protein S27a fusion protein [Polysphondylium
           pallidum PN500]
          Length = 167

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 14/148 (9%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 21  KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 73

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI----RDLF 117
           EST+ L+      + I +K+ +  I+ LKV+    +   E VK K++    I    + L 
Sbjct: 74  ESTLHLVLRLRGGMEIFIKSLTGKIITLKVEDSDSI---ENVKSKIQEKEGIPPDQQRLI 130

Query: 118 CTGMKLKDCKTLACYGVKDDRGVACFIS 145
             G  L D +TL+ Y ++ +  +  F+S
Sbjct: 131 FVGRILDDGRTLSDYNIQKESTLIWFVS 158


>gi|148687613|gb|EDL19560.1| ubiquitin C, isoform CRA_a [Mus musculus]
 gi|148687614|gb|EDL19561.1| ubiquitin C, isoform CRA_a [Mus musculus]
          Length = 614

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 347 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 398

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 399 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 442

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 443 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 476



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 42/170 (24%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDD--------------ILKLK--VKIFVKMLTEEIVK 104
           +EST+ L+      + I VK  +                +L+L+  ++IFVK LT + + 
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTINYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 274

Query: 105 LKVKVLLTIRD-----------------LFCTGMKLKDCKTLACYGVKDD 137
           L+V+   TI +                 L   G +L+D +TL+ Y ++ +
Sbjct: 275 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 324



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 25/114 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 499 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 550

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIR 114
           +EST+ L+                  L+  ++IFVK LT + + L V+  +T +
Sbjct: 551 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSVTTK 588


>gi|114159830|gb|ABI53722.1| polyubiquitin [Pyropia yezoensis]
          Length = 533

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V L I
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKLKI 258

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 410

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 519 KESTLHLVL 527


>gi|82539669|ref|XP_724205.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
 gi|23478774|gb|EAA15770.1| Unknown protein [Plasmodium yoelii yoelii]
          Length = 329

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 36  KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 87

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 88  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKI 131

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 132 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 163



 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 188 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 239

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 240 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKI 283

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 284 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 315


>gi|71835909|gb|AAZ42330.1| ubiquitin protein 1 [Caenorhabditis remanei]
          Length = 164

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 21  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 72

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 73  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 116

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 117 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 148


>gi|402898876|ref|XP_003919464.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-B [Papio anubis]
          Length = 305

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 46/154 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD--- 115
           +EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +   
Sbjct: 63  KESTLHL------------------VLRLRXCMQIFVKTLTGKTITLEVEPSDTIENVKA 104

Query: 116 --------------LFCTGMKLKDCKTLACYGVK 135
                         L   G +L+D +TL+ Y ++
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|56199554|gb|AAV84266.1| ubiquitin [Culicoides sonorensis]
          Length = 191

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 49  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 100

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 101 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 144

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 145 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 176



 Score = 38.9 bits (89), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 42/124 (33%)

Query: 30  DIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQLLFCAIKVLSISVKAPSDDILK 88
           D Q L FAG +L +GR L DY        N+++EST+ L+                  L+
Sbjct: 1   DQQRLIFAGKQLEDGRTLSDY--------NIQKESTLHLVLR----------------LR 36

Query: 89  LKVKIFVKMLTEEIVKLKVKVLLTIRD-----------------LFCTGMKLKDCKTLAC 131
             ++IFVK LT + + L+V+   TI +                 L   G +L+D +TL+ 
Sbjct: 37  GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 96

Query: 132 YGVK 135
           Y ++
Sbjct: 97  YNIQ 100


>gi|339233016|ref|XP_003381625.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979538|gb|EFV62321.1| ubiquitin family protein [Trichinella spiralis]
          Length = 258

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+KG + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 43  KTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 94

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 95  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKI 138

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D + L+ Y ++ +
Sbjct: 139 QDKEGIPPDQQRLIFAGKQLEDGRMLSDYNIQKE 172



 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+KG + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 195 KTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 246

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 247 KESTLHLVL 255


>gi|197129051|gb|ACH45549.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
          Length = 305

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGISPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 9/68 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG S D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLL 68
           +E T+ L+
Sbjct: 291 KELTLHLV 298


>gi|395836339|ref|XP_003791115.1| PREDICTED: polyubiquitin-B [Otolemur garnettii]
 gi|149287178|gb|ABR23488.1| ubiquitin/40S ribosomal protein S27a [Ornithodoros parkeri]
 gi|194374819|dbj|BAG62524.1| unnamed protein product [Homo sapiens]
          Length = 153

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|387916118|gb|AFK11668.1| polyubiquitin-like protein [Callorhinchus milii]
          Length = 381

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L F G +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFVGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPLDQQCLIFAGKQLEDGRTLSDYNIQ 290



 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPLDQQCLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 291 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 334

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 335 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 366



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|357440433|ref|XP_003590494.1| Ubiquitin [Medicago truncatula]
 gi|355479542|gb|AES60745.1| Ubiquitin [Medicago truncatula]
          Length = 312

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 7/67 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLL 68
           EST+ L+
Sbjct: 216 ESTLHLV 222


>gi|224065086|ref|XP_002301663.1| predicted protein [Populus trichocarpa]
 gi|222843389|gb|EEE80936.1| predicted protein [Populus trichocarpa]
          Length = 305

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 87  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 140 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 183

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 184 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214



 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +G         LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGS-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 239 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 291

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 292 ESTLHLVL 299


>gi|156101796|ref|XP_001616591.1| polyubiquitin 5 [Plasmodium vivax Sal-1]
 gi|148805465|gb|EDL46864.1| polyubiquitin 5, putative [Plasmodium vivax]
          Length = 381

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVESSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVESSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|340939025|gb|EGS19647.1| hypothetical protein CTHT_0041260 [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 305

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|226477450|emb|CAX72419.1| polyubiquitin [Schistosoma japonicum]
          Length = 245

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 25/99 (25%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLT 99
           +EST+ L+                  L+  ++IFVK LT
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLT 237


>gi|168028716|ref|XP_001766873.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162681852|gb|EDQ68275.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 344

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYSIQ 138



 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  ++++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYSIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290


>gi|402471724|gb|EJW05300.1| polyubiquitin [Edhazardia aedis USNM 41457]
          Length = 153

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVESSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|225709684|gb|ACO10688.1| Ubiquitin [Caligus rogercresseyi]
          Length = 229

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKTKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|170584490|ref|XP_001897032.1| polyubiquitin precursor [Brugia malayi]
 gi|158595567|gb|EDP34110.1| polyubiquitin precursor, putative [Brugia malayi]
          Length = 391

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 97  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 148

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 149 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 192

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 193 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 226



 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 249 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 300

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 301 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 344

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 345 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 378


>gi|168005217|ref|XP_001755307.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693435|gb|EDQ79787.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 305

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290


>gi|357498827|ref|XP_003619702.1| Ubiquitin-like protein [Medicago truncatula]
 gi|355494717|gb|AES75920.1| Ubiquitin-like protein [Medicago truncatula]
          Length = 245

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 40/153 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 62  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 114

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 115 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 158

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVKDD 137
                    + L   G +L+D +TLA Y ++ +
Sbjct: 159 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 191


>gi|302789426|ref|XP_002976481.1| hypothetical protein SELMODRAFT_271198 [Selaginella moellendorffii]
 gi|302803592|ref|XP_002983549.1| hypothetical protein SELMODRAFT_228943 [Selaginella moellendorffii]
 gi|300148792|gb|EFJ15450.1| hypothetical protein SELMODRAFT_228943 [Selaginella moellendorffii]
 gi|300155519|gb|EFJ22150.1| hypothetical protein SELMODRAFT_271198 [Selaginella moellendorffii]
          Length = 381

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L  GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|168016982|ref|XP_001761027.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687713|gb|EDQ74094.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 533

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 467 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 519

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 520 ESTLHLVL 527


>gi|444791|prf||1908225A ubiquitin
          Length = 305

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL  Y ++
Sbjct: 107 QDKECIPPDQQRLIFAGKQLEDGRTLFDYNIQ 138


>gi|388571222|gb|AFK73707.1| ubiquitin [Ostrea edulis]
          Length = 153

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDRQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|302762631|ref|XP_002964737.1| hypothetical protein SELMODRAFT_270468 [Selaginella moellendorffii]
 gi|300166970|gb|EFJ33575.1| hypothetical protein SELMODRAFT_270468 [Selaginella moellendorffii]
          Length = 535

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 467 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 519

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 520 ESTLHLVL 527


>gi|302784142|ref|XP_002973843.1| hypothetical protein SELMODRAFT_173723 [Selaginella moellendorffii]
 gi|300158175|gb|EFJ24798.1| hypothetical protein SELMODRAFT_173723 [Selaginella moellendorffii]
          Length = 457

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L  GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442


>gi|168062150|ref|XP_001783045.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665429|gb|EDQ52114.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 229

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|168050741|ref|XP_001777816.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670792|gb|EDQ57354.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 381

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|346321308|gb|EGX90907.1| RING and UBP finger domain protein [Cordyceps militaris CM01]
          Length = 776

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 46/156 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD--- 115
           +EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +   
Sbjct: 63  KESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 104

Query: 116 --------------LFCTGMKLKDCKTLACYGVKDD 137
                         L   G +L+D +TL+ Y ++ +
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140


>gi|242074418|ref|XP_002447145.1| hypothetical protein SORBIDRAFT_06g029360 [Sorghum bicolor]
 gi|241938328|gb|EES11473.1| hypothetical protein SORBIDRAFT_06g029360 [Sorghum bicolor]
          Length = 153

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKSITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|28189917|dbj|BAC56573.1| similar to polyubiquitin [Bos taurus]
          Length = 171

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 20  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 71

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 72  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 115

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 116 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 149


>gi|66358028|ref|XP_626192.1| polyubiquitin with 3 Ub domains [Cryptosporidium parvum Iowa II]
 gi|46227264|gb|EAK88214.1| polyubiquitin with 3 Ub domains [Cryptosporidium parvum Iowa II]
          Length = 241

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 23  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 74

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 75  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 118

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 119 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 150



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 175 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 226

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 227 KESTLHLVL 235


>gi|302822499|ref|XP_002992907.1| hypothetical protein SELMODRAFT_162680 [Selaginella moellendorffii]
 gi|302825882|ref|XP_002994512.1| hypothetical protein SELMODRAFT_163447 [Selaginella moellendorffii]
 gi|300137503|gb|EFJ04420.1| hypothetical protein SELMODRAFT_163447 [Selaginella moellendorffii]
 gi|300139252|gb|EFJ05996.1| hypothetical protein SELMODRAFT_162680 [Selaginella moellendorffii]
          Length = 382

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|90076064|dbj|BAE87712.1| unnamed protein product [Macaca fascicularis]
          Length = 210

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL  E S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEAEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 23/106 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLF-------------CAIKVLSISVKAPSDDILKLKVKI 93
           +EST+ L+                 K +++ V+ PSD I  +K KI
Sbjct: 139 KESTLHLVLRLRGGDAVSYVKTLTGKTITLEVE-PSDTIENVKAKI 183



 Score = 43.9 bits (102), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRL 46
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +  +GR 
Sbjct: 164 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ--HGRW 206


>gi|357474767|ref|XP_003607669.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula]
 gi|355508724|gb|AES89866.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 448

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 230 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 282

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 283 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 324

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TLA Y ++ +
Sbjct: 325 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 359



 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 382 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 434

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 435 ESTLHLVL 442


>gi|28189839|dbj|BAC56534.1| similar to polyubiquitin [Bos taurus]
          Length = 157

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 15  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 66

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 67  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 110

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 111 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 142


>gi|302822663|ref|XP_002992988.1| hypothetical protein SELMODRAFT_187148 [Selaginella moellendorffii]
 gi|302825886|ref|XP_002994514.1| hypothetical protein SELMODRAFT_138728 [Selaginella moellendorffii]
 gi|300137505|gb|EFJ04422.1| hypothetical protein SELMODRAFT_138728 [Selaginella moellendorffii]
 gi|300139188|gb|EFJ05934.1| hypothetical protein SELMODRAFT_187148 [Selaginella moellendorffii]
          Length = 229

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|92790156|emb|CAI83747.1| Polyubiqutin 1 [Isotricha prostoma]
          Length = 366

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 72  KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 124

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 125 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 168

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 169 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 199



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 224 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 276

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 277 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 320

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 321 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 351



 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 40/146 (27%)

Query: 7   NVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKRESTMQ 66
           +VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++EST+ 
Sbjct: 1   DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQKESTLH 53

Query: 67  LLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----------- 115
           L+                  L+  ++IFVK LT + + L V+   TI +           
Sbjct: 54  LVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGI 97

Query: 116 ------LFCTGMKLKDCKTLACYGVK 135
                 L   G +L+D +TLA Y ++
Sbjct: 98  PPDQQRLIFAGKQLEDNRTLADYNIQ 123


>gi|92790162|emb|CAI83750.1| Polyubiqutin 4 [Isotricha prostoma]
          Length = 143

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 1   KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 53

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 54  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 97

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 98  DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 128


>gi|56199552|gb|AAV84265.1| ubiquitin [Culicoides sonorensis]
          Length = 167

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140


>gi|7799051|emb|CAB90826.1| ubiquitin [Cyanidium caldarium]
          Length = 153

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|302918054|ref|XP_003052575.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733515|gb|EEU46862.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 305

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TLA Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|168043709|ref|XP_001774326.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674318|gb|EDQ60828.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 457

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442


>gi|14250448|gb|AAH08661.1| Ubc protein [Mus musculus]
          Length = 202

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140


>gi|324520160|gb|ADY47572.1| Polyubiquitin-A, partial [Ascaris suum]
          Length = 354

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 33/143 (23%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDLFCTG 120
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++    
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKA-- 256

Query: 121 MKLKDCKTLA-----CYGVKDDR 138
            K++D +         YG  DD+
Sbjct: 257 -KIQDKEGRGELRTMIYGFGDDK 278


>gi|18405196|ref|NP_564675.1| polyubiquitin 12 [Arabidopsis thaliana]
 gi|122213849|sp|Q3E7K8.1|UBQ12_ARATH RecName: Full=Polyubiquitin 12; Contains: RecName:
           Full=Ubiquitin-related 1; Contains: RecName:
           Full=Ubiquitin-related 2; Contains: RecName:
           Full=Ubiquitin-related 3; Flags: Precursor
 gi|332195060|gb|AEE33181.1| polyubiquitin 12 [Arabidopsis thaliana]
          Length = 230

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI NLK  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 87  KTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 140 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 183

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G + +D +TLA Y ++
Sbjct: 184 DKEGISPDQQRLIFAGKQHEDGRTLADYNIQ 214



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT  L VE S+TI N+K  + + EG   D   L FAG +L +GR        LA  NV+ 
Sbjct: 11  KTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGR-------TLADYNVQE 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           +ST+ LL                   +  ++IFVK LT + + L+V+   TI        
Sbjct: 64  DSTLHLLLR----------------FRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|92790160|emb|CAI83749.1| Polyubiqutin 3 [Isotricha prostoma]
          Length = 374

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 4   KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 56

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 57  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 100

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 101 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 131



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 156 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 208

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 209 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 252

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 253 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 283



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 308 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 360

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 361 ESTLHLVL 368


>gi|92790164|emb|CAI83751.1| Polyubiqutin 1 [Entodinium caudatum]
          Length = 297

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 3   KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 55

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 56  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 99

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 100 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 130



 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 155 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 207

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 208 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 251

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 252 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 282


>gi|92790148|emb|CAI83743.1| Polyubiqutin 3 [Dasytricha ruminantium]
          Length = 363

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 69  KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 121

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 122 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 165

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 166 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 196



 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 221 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 273

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 274 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 317

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 318 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 348



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 40/142 (28%)

Query: 11  SETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKRESTMQLLFC 70
           S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++EST+ L+  
Sbjct: 2   SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQKESTLHLVLR 54

Query: 71  AIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD--------------- 115
                           L+  ++IFVK LT + + L V+   TI +               
Sbjct: 55  ----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 98

Query: 116 --LFCTGMKLKDCKTLACYGVK 135
             L   G +L+D +TLA Y ++
Sbjct: 99  QRLIFAGKQLEDNRTLADYNIQ 120


>gi|428672795|gb|EKX73708.1| ubiquitin family member protein [Babesia equi]
          Length = 155

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|302756493|ref|XP_002961670.1| hypothetical protein SELMODRAFT_227280 [Selaginella moellendorffii]
 gi|300170329|gb|EFJ36930.1| hypothetical protein SELMODRAFT_227280 [Selaginella moellendorffii]
          Length = 687

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 368 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 411

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 412 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442



 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 467 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 520 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 563

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 564 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 594



 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 619 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 671

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 672 ESTLHLVL 679


>gi|168005465|ref|XP_001755431.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693559|gb|EDQ79911.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 231

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|357512381|ref|XP_003626479.1| Ubiquitin-like protein [Medicago truncatula]
 gi|355501494|gb|AES82697.1| Ubiquitin-like protein [Medicago truncatula]
          Length = 277

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 40/153 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 59  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 111

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 112 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 155

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVKDD 137
                    + L   G +L+D +TLA Y ++ +
Sbjct: 156 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 188



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 211 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 263

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 264 ESTLHLVL 271


>gi|92790152|emb|CAI83745.1| Polyubiqutin 1 [Isotricha intestinalis]
          Length = 301

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 7   KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 59

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 60  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 103

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 104 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 134



 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 159 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 211

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 212 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 255

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 256 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 286


>gi|92790144|emb|CAI83741.1| Polyubiqutin 1 [Dasytricha ruminantium]
 gi|92790150|emb|CAI83744.1| Polyubiqutin 4 [Dasytricha ruminantium]
 gi|92790154|emb|CAI83746.1| Polyubiqutin 2 [Isotricha intestinalis]
 gi|92790158|emb|CAI83748.1| Polyubiqutin 2 [Isotricha prostoma]
          Length = 379

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 9   KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 61

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 62  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 105

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 106 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 136



 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 161 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 213

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 214 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 257

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 258 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 288



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 313 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 365

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 366 ESTLHLVL 373


>gi|18421671|ref|NP_568552.1| polyubiquitin 9 [Arabidopsis thaliana]
 gi|75170661|sp|Q9FHQ6.1|UBQ9_ARATH RecName: Full=Polyubiquitin 9; Contains: RecName:
           Full=Ubiquitin-related 1; Contains: RecName:
           Full=Ubiquitin-related 2; Contains: RecName:
           Full=Ubiquitin-related 3; Contains: RecName:
           Full=Ubiquitin-related 4; Flags: Precursor
 gi|9757974|dbj|BAB08310.1| polyubiquitin [Arabidopsis thaliana]
 gi|332006830|gb|AED94213.1| polyubiquitin 9 [Arabidopsis thaliana]
          Length = 322

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 89  KTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGR-------TLADYNIQK 141

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTIR 114
           EST+ L+                  L+  ++IFV+ LT + + L+V+       V   I+
Sbjct: 142 ESTLHLVLR----------------LRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQ 185

Query: 115 D----------LFCTGMKLKDCKTLACYGVK 135
           D          L   G +L+D +TLA Y ++
Sbjct: 186 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 216



 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 6/68 (8%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KE    D Q L FAG++L +G         LA  N+++
Sbjct: 241 KTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGY------YTLADYNIQK 294

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 295 ESTLHLVL 302



 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+T++V  S+TI N+K  + + EG   D Q L F+G  L +GR        LA  ++++
Sbjct: 13  KTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGR-------TLADYSIQK 65

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           +S + L   A++             L+  ++IFVK LT + + L+V+   TI        
Sbjct: 66  DSILHL---ALR-------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 109

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L D +TLA Y ++
Sbjct: 110 DKEGVPPDQQRLIFAGKQLDDGRTLADYNIQ 140


>gi|440482103|gb|ELQ62622.1| RING finger protein [Magnaporthe oryzae P131]
          Length = 1056

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 46/156 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD--- 115
           +EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +   
Sbjct: 63  KESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 104

Query: 116 --------------LFCTGMKLKDCKTLACYGVKDD 137
                         L   G +L+D +TL+ Y ++ +
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 65.9 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 46/156 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD--- 115
           +EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +   
Sbjct: 215 KESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 256

Query: 116 --------------LFCTGMKLKDCKTLACYGVKDD 137
                         L   G +L+D +TL+ Y ++ +
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292


>gi|440473707|gb|ELQ42489.1| RING finger protein [Magnaporthe oryzae Y34]
          Length = 1058

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 46/156 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD--- 115
           +EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +   
Sbjct: 63  KESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 104

Query: 116 --------------LFCTGMKLKDCKTLACYGVKDD 137
                         L   G +L+D +TL+ Y ++ +
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 65.9 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 46/156 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD--- 115
           +EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +   
Sbjct: 215 KESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 256

Query: 116 --------------LFCTGMKLKDCKTLACYGVKDD 137
                         L   G +L+D +TL+ Y ++ +
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292


>gi|375298514|dbj|BAL61084.1| polyubiqutin [Dianthus caryophyllus]
 gi|375298516|dbj|BAL61085.1| polyubiquitin [Dianthus caryophyllus]
 gi|375298518|dbj|BAL61086.1| polyubiquitin [Dianthus caryophyllus]
          Length = 381

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 259

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290



 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 315 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 367

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 368 ESTLHLVL 375


>gi|32400969|gb|AAP80690.1| polyubiquitin [Griffithsia japonica]
          Length = 195

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 53  KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 104

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 105 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKTKI 148

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 149 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 182


>gi|357474747|ref|XP_003607659.1| Ubiquitin [Medicago truncatula]
 gi|355508714|gb|AES89856.1| Ubiquitin [Medicago truncatula]
          Length = 259

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR+       LA  N+++
Sbjct: 39  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRI-------LADYNIQK 91

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 92  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 135

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TL  Y ++
Sbjct: 136 DKEGIPPDQQRLIFAGKQLEDGRTLGDYNIQ 166



 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        L   N+++
Sbjct: 115 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLGDYNIQK 167

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDLFCT-- 119
           EST+ L+                  L+  ++IFV  LT + + L V+   TI D+  T  
Sbjct: 168 ESTLHLVLR----------------LRGGMQIFVNTLTGKTITLDVESSDTIADVKLTLE 211

Query: 120 ---------------GMKLKDCKTLACYGVK 135
                          G +LKD  TLA Y ++
Sbjct: 212 EKVGIPLDQVRVVIAGKQLKDSYTLAHYNIQ 242



 Score = 36.6 bits (83), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI ++K  + EK G   D   +  AG +L +          LA  N+++
Sbjct: 191 KTITLDVESSDTIADVKLTLEEKVGIPLDQVRVVIAGKQLKD-------SYTLAHYNIQK 243

Query: 62  ESTMQLLF 69
           EST+ ++ 
Sbjct: 244 ESTLHMVL 251


>gi|340709503|ref|XP_003393346.1| PREDICTED: polyubiquitin-B-like isoform 1 [Bombus terrestris]
 gi|340709505|ref|XP_003393347.1| PREDICTED: polyubiquitin-B-like isoform 2 [Bombus terrestris]
          Length = 157

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 16/139 (11%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI----RDL 116
           +EST  L+      + ISVK  +   + L+V +     T E VK K+     I    + L
Sbjct: 63  KESTSHLVLRLRGGMQISVKTLTGKAITLEVDV---PDTIENVKAKIHEKEGIPPDQQRL 119

Query: 117 FCTGMKLKDCKTLACYGVK 135
              G +L+D +TL+ Y ++
Sbjct: 120 IFAGKQLEDGRTLSDYNIQ 138


>gi|92790146|emb|CAI83742.1| Polyubiquitin 2 [Dasytricha ruminantium]
          Length = 354

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 60  KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 112

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 113 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 156

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 157 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 187



 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 212 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 264

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 265 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 308

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 309 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 339



 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 40/132 (30%)

Query: 21  VHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKRESTMQLLFCAIKVLSISVK 80
           + +KEG   D Q L FAG +L + R        LA  N+++EST+ L+            
Sbjct: 3   IQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQKESTLHLVLR---------- 45

Query: 81  APSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD-----------------LFCTGMKL 123
                 L+  ++IFVK LT + + L V+   TI +                 L   G +L
Sbjct: 46  ------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 99

Query: 124 KDCKTLACYGVK 135
           +D +TLA Y ++
Sbjct: 100 EDNRTLADYNIQ 111


>gi|92790182|emb|CAI83760.1| Polyubiqutin 1 [Epidinium ecaudatum]
          Length = 378

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 8   KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 60

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 61  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 104

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 105 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 135



 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 160 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 212

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 213 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 256

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 257 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 287



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 312 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 364

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 365 ESTLHLVL 372


>gi|86370988|gb|ABC94632.1| ubiquitin C [Ictalurus punctatus]
          Length = 192

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 50  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 101

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 102 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIGNVKAKI 145

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 146 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 177



 Score = 38.9 bits (89), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 42/124 (33%)

Query: 30  DIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQLLFCAIKVLSISVKAPSDDILK 88
           D Q L FAG +L +GR L DY        N+++EST+ L+                  L+
Sbjct: 2   DQQRLIFAGKQLEDGRTLSDY--------NIQKESTLHLVLR----------------LR 37

Query: 89  LKVKIFVKMLTEEIVKLKVKVLLTIRD-----------------LFCTGMKLKDCKTLAC 131
             ++IFVK LT + + L+V+   TI +                 L   G +L+D +TL+ 
Sbjct: 38  GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 97

Query: 132 YGVK 135
           Y ++
Sbjct: 98  YNIQ 101


>gi|567767|gb|AAA53067.1| p125 protein, partial [Bovine viral diarrhea virus 1]
          Length = 1054

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 46/156 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 357 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 408

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD--- 115
           +EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +   
Sbjct: 409 KESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 450

Query: 116 --------------LFCTGMKLKDCKTLACYGVKDD 137
                         L   G +L+D +TL+ Y ++ +
Sbjct: 451 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 486


>gi|443922596|gb|ELU42015.1| polyubiquitin [Rhizoctonia solani AG-1 IA]
          Length = 681

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 46/156 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 463 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 514

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD--- 115
           +EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +   
Sbjct: 515 KESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 556

Query: 116 --------------LFCTGMKLKDCKTLACYGVKDD 137
                         L   G +L+D +TL+ Y ++ +
Sbjct: 557 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 592



 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 615 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 666

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 667 KESTLHLVL 675


>gi|403284846|ref|XP_003933763.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 153

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 46/154 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TIKN+K  + +KEG   D Q L FA  +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLEDGRNLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD--- 115
           +EST+ L                  IL+L+  ++IFVK LT + + L+V+   TI +   
Sbjct: 63  KESTLHL------------------ILRLRGGMQIFVKTLTSKTITLEVEPSDTIENVKA 104

Query: 116 --------------LFCTGMKLKDCKTLACYGVK 135
                         L   G +L+D +TL+ Y ++
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLF 69
           +ES + L+ 
Sbjct: 139 KESILHLVL 147


>gi|375298520|dbj|BAL61087.1| polyubiquitin [Dianthus caryophyllus]
          Length = 229

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|380446928|gb|AFD53810.1| ubiquitin, partial [Trichoderma harzianum]
          Length = 264

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 16  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 67

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + V L+V+   TI       
Sbjct: 68  KESTLHLVLR----------------LRGGMQIFVKTLTWKTVTLEVESSDTIDNVKSKI 111

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 112 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 143



 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 42/153 (27%)

Query: 1   MKTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNV 59
            KTVTL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N+
Sbjct: 91  WKTVTLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NI 142

Query: 60  KRESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------ 113
           ++EST+ L+                  L+  ++IFVK LT + + L+V+   TI      
Sbjct: 143 QKESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSK 186

Query: 114 -----------RDLFCTGMKLKDCKTLACYGVK 135
                      + L   G +L+D +TL+ Y ++
Sbjct: 187 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYXIQ 219


>gi|403284842|ref|XP_003933761.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 153

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 46/154 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TIKN+K  + +KEG   D Q L FA  +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLEDGRNLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD--- 115
           +EST+ L                  IL+L+  ++IFVK LT + + L+V+   TI +   
Sbjct: 63  KESTLHL------------------ILRLRGGMQIFVKTLTSKTITLEVEPSDTIENVKA 104

Query: 116 --------------LFCTGMKLKDCKTLACYGVK 135
                         L   G +L+D +TL+ Y ++
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLF 69
           +ES + L+ 
Sbjct: 139 KESILHLVL 147


>gi|157093211|gb|ABV22260.1| polyubiquitin [Karlodinium micrum]
          Length = 536

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI       
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKI 410

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 519 KESTLHLVL 527


>gi|163575|gb|AAA30720.1| polyubiquitin, partial [Bos taurus]
          Length = 164

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 22  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 73

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 74  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 117

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 118 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 151


>gi|339233042|ref|XP_003381638.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979524|gb|EFV62308.1| ubiquitin family protein [Trichinella spiralis]
          Length = 274

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+KG + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 20  KTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 71

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 72  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKI 115

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D + L+ Y ++ +
Sbjct: 116 QDKEGIPPDQQRLIFAGKQLEDGRMLSDYNIQKE 149



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 15/90 (16%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFA--------GDRLMNGRLIDYEDMA 53
           KT+TL VE S+TI+N+KG + +KEG   D Q L FA        G +L +GR        
Sbjct: 172 KTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAEFMCMAFIGKQLEDGR-------T 224

Query: 54  LASPNVKRESTMQLLFCAIKVLSISVKAPS 83
           LA  N+++EST+ L+      + I VK P+
Sbjct: 225 LADYNIQKESTLHLVLRLRGGMQIFVKTPT 254


>gi|124784679|gb|ABN14988.1| polyubiquitin [Taenia asiatica]
          Length = 251

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 72  KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 123

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  ++  ++IFVK LT + + L+V+   TI +     
Sbjct: 124 KESTLHLVLR----------------MRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 167

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 168 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 199



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 56/104 (53%), Gaps = 20/104 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 148 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 199

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKI 93
           +EST+ L+      + I VK            PSD I  +K KI
Sbjct: 200 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKI 243



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 30/140 (21%)

Query: 8   VEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQ 66
           VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N+++EST+ 
Sbjct: 2   VEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKESTLH 53

Query: 67  LLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD 115
           L+      + I VK            PSD I  +K KI          + K  +    + 
Sbjct: 54  LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKI----------QDKEGIPPDQQR 103

Query: 116 LFCTGMKLKDCKTLACYGVK 135
           L   G +L+D +TL+ Y ++
Sbjct: 104 LIFAGKQLEDGRTLSDYNIQ 123


>gi|395536358|ref|XP_003770187.1| PREDICTED: polyubiquitin-B [Sarcophilus harrisii]
          Length = 305

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 182

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D   L+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDXXXLSDYNIQ 214



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 291 KESTLHLVL 299


>gi|157093353|gb|ABV22331.1| ubiquitin [Noctiluca scintillans]
          Length = 302

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYSIQ 290


>gi|414865716|tpg|DAA44273.1| TPA: Ubiquitin fusion protein [Zea mays]
          Length = 205

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 40/153 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVKDD 137
                    + L   G +L+D +TLA Y ++ +
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 140


>gi|571519|gb|AAA75310.1| polyubiquitin [Gracilaria gracilis]
 gi|1095488|prf||2109223A poly-ubiquitin
          Length = 457

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTAKTITLEVESSDTIENVKTKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKTKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKTKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442


>gi|92790166|emb|CAI83752.1| Polyubiqutin 1 [Eudiplodinium maggii]
          Length = 259

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 41  KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 93

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 94  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 137

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 138 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 168



 Score = 55.1 bits (131), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 193 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 245

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 246 ESTLHLVL 253


>gi|28436485|gb|AAO43309.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 250

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL V+ S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 31  KTITLEVQSSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 83

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 84  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 127

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 128 DKEWIPPDQQRLIFAGKQLEDGRTLADYNIQ 158



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KE    D Q L FAG +L +GR        LA  N+++
Sbjct: 107 KTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 159

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 160 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 203

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 204 DKEGIPPDQKRLIFAGKQLEDGRTLAVYNIQ 234



 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D + L FAG +L +GR        LA  N+++
Sbjct: 183 KTITLEVESSDTIDNVKAKIQDKEGIPPDQKRLIFAGKQLEDGR-------TLAVYNIQK 235

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 236 ESTLHLVL 243


>gi|325302604|tpg|DAA34466.1| TPA_exp: ubiquitin [Amblyomma variegatum]
          Length = 194

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 26  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 77

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 78  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 121

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 122 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 155


>gi|355753795|gb|EHH57760.1| Polyubiquitin-C [Macaca fascicularis]
          Length = 153

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+T++N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTLENVKAKIQDKEGIPPDQQRLIFAGQQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 139 KESTLHLVL 147


>gi|350537541|ref|NP_001232763.1| putative ubiquitin C variant 9 [Taeniopygia guttata]
 gi|197129065|gb|ACH45563.1| putative ubiquitin C variant 9 [Taeniopygia guttata]
          Length = 229

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 30/146 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K KI          + K  +
Sbjct: 63  KESTLHLVLRLRGGMQIFVKTLTGKTIILEVEPSDTIENVKAKI----------QDKEGI 112

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVK 135
               + L   G +L+D +TL+ Y ++
Sbjct: 113 PPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|92790184|emb|CAI83761.1| Polyubiqutin 2 [Epidinium ecaudatum]
          Length = 322

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 28  KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 80

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 81  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 124

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 125 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 155



 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 180 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 232

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 233 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQ 276

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TLA Y ++
Sbjct: 277 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 307


>gi|28436479|gb|AAO43306.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 325

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 31  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 83

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IF+K LT + + L+V+   TI        
Sbjct: 84  ESTLHLVLR----------------LRGGMQIFLKTLTGKTITLEVESSDTIDNVKAKIQ 127

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 128 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 158



 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 39/150 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S TI N+K  + +KE    D Q L FAG +L +GR        LA  N+++
Sbjct: 183 KTITLEVESSNTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 235

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL----- 116
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++     
Sbjct: 236 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQ 279

Query: 117 -----------FCTGMKLKDCKTLACYGVK 135
                         G +L+D +TLA Y ++
Sbjct: 280 DKEGIPPDQQRLIFGKQLEDGRTLADYNIQ 309


>gi|170583349|ref|XP_001896539.1| ubiquitin [Brugia malayi]
 gi|158596243|gb|EDP34630.1| ubiquitin, putative [Brugia malayi]
          Length = 307

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPADQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   T+ +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVETSDTVENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPGQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 74/153 (48%), Gaps = 44/153 (28%)

Query: 3   TVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDR--LMNGRLI-DYEDMALASPNV 59
           T+TL VE S+TI+N+K  V +KEG   D Q L FAG R  L +GR   DY        N+
Sbjct: 164 TITLEVETSDTIENVKAKVQDKEGIPPDQQRLIFAGKRKQLEDGRTFSDY--------NI 215

Query: 60  KRESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           ++EST+ L+                  L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 QKESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAK 259

Query: 116 -------------LFCTGMKLKDCKTLACYGVK 135
                        L   G +L+D +TL+ Y ++
Sbjct: 260 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 292



 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 241 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 292

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 293 KESTLHLVL 301


>gi|61889379|emb|CAI51312.2| polyubiquitin [Capsicum chinense]
          Length = 153

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                   +  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------FRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|323453810|gb|EGB09681.1| polyubiquitin, partial [Aureococcus anophagefferens]
          Length = 134

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 4   KTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 55

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 56  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKI 99

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 100 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 131


>gi|302595808|sp|P0CH27.1|RL402_TRYCR RecName: Full=Ubiquitin-60S ribosomal protein L40; Contains:
           RecName: Full=Ubiquitin; Contains: RecName: Full=60S
           ribosomal protein L40; Flags: Precursor
 gi|162337|gb|AAA30271.1| ubiquitin precursor [Trypanosoma cruzi]
          Length = 356

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 40/153 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVKDD 137
                      L   G +L+D +TLA Y ++ +
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 140



 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 40/153 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 216 ESTLHLVLR----------------LRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQ 259

Query: 116 -----------LFCTGMKLKDCKTLACYGVKDD 137
                      L   G +L+D +TLA Y ++ +
Sbjct: 260 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 292


>gi|62911180|gb|AAX56917.1| polyubiquitin [Gracilaria lemaneiformis]
          Length = 457

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKTKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKTKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKTKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442


>gi|357474765|ref|XP_003607668.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula]
 gi|355508723|gb|AES89865.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 497

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 230 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 282

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 283 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 324

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TLA Y ++ +
Sbjct: 325 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 359



 Score = 59.3 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 27/107 (25%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 382 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 434

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLK 106
           EST+ L                  +L+L+  ++IFVK LT + + L+
Sbjct: 435 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLE 463


>gi|2641213|gb|AAB86858.1| polyubiquitin, partial [Schizophyllum commune]
          Length = 139

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|330805887|ref|XP_003290908.1| ubiquitin [Dictyostelium purpureum]
 gi|325078946|gb|EGC32571.1| ubiquitin [Dictyostelium purpureum]
          Length = 229

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|425780946|gb|EKV18932.1| hypothetical protein PDIP_25190 [Penicillium digitatum Pd1]
          Length = 233

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 15  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 66

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 67  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 110

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 111 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 142



 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 167 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 218

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 219 KESTLHLVL 227


>gi|90075190|dbj|BAE87275.1| unnamed protein product [Macaca fascicularis]
          Length = 157

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDIIENVKAKI 106

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|449483218|ref|XP_004156525.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Cucumis
           sativus]
          Length = 208

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 36/153 (23%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+      L   +  P        ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVL----RLRGGIIEP--------MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 111

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVKDD 137
                    + L   G +L+D +TLA Y ++ +
Sbjct: 112 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 144


>gi|3047318|gb|AAC13691.1| poly-ubiquitin [Magnaporthe grisea]
          Length = 379

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 44/152 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L                  +L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHL------------------VLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 256

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 257 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 288



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 313 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 364

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 365 KESTLHLVL 373


>gi|119624911|gb|EAX04506.1| ubiquitin B, isoform CRA_e [Homo sapiens]
          Length = 152

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 28/141 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDLFCTG 120
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++    
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKA-- 104

Query: 121 MKLKDCKTLACYGVKDDRGVA 141
            K++D + +        RG +
Sbjct: 105 -KIQDKEGIPPASPPTSRGSS 124


>gi|400599610|gb|EJP67307.1| Ubiquitin subgroup [Beauveria bassiana ARSEF 2860]
          Length = 212

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 9/63 (14%)

Query: 8   VEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQ 66
           VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N+++EST+ 
Sbjct: 152 VESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKESTLH 203

Query: 67  LLF 69
           L+ 
Sbjct: 204 LVL 206


>gi|16191634|emb|CAC94926.1| putative ubiquitin [Pleurotus sp. 'Florida']
          Length = 243

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 68  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 119

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 120 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 163

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 164 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 195



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 42/143 (29%)

Query: 11  SETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQLLF 69
           S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N+++EST+ L+ 
Sbjct: 1   SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKESTLHLVL 52

Query: 70  CAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI---------------- 113
                            L+  ++IFVK LT + + L+V+   TI                
Sbjct: 53  R----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 96

Query: 114 -RDLFCTGMKLKDCKTLACYGVK 135
            + L   G +L+D +TL+ Y ++
Sbjct: 97  QQRLIFAGKQLEDGRTLSDYNIQ 119


>gi|302393779|sp|P42740.2|UBIQP_AGLNE RecName: Full=Polyubiquitin; Contains: RecName:
           Full=Ubiquitin-related 1; Contains: RecName:
           Full=Ubiquitin; Contains: RecName:
           Full=Ubiquitin-related 2; Contains: RecName:
           Full=Ubiquitin-related 3; Flags: Precursor
 gi|166336|gb|AAA72126.1| polyubiquitin [Aglaothamnion neglectum]
 gi|445141|prf||1908440A poly-ubiquitin
          Length = 457

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKTKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKTKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNLQ 290



 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N +
Sbjct: 11  KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NNQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKTKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|425774856|gb|EKV13151.1| hypothetical protein PDIG_39650 [Penicillium digitatum PHI26]
          Length = 309

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 15  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 66

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 67  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 110

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 111 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 142



 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 167 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 218

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 219 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 262

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 263 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 294


>gi|449662449|ref|XP_004205543.1| PREDICTED: polyubiquitin-B-like isoform 1 [Hydra magnipapillata]
 gi|449665888|ref|XP_002158413.2| PREDICTED: polyubiquitin-like [Hydra magnipapillata]
          Length = 380

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE ++TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEAADTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE ++TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE ++TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|3954791|emb|CAA26488.1| unnamed protein product [Gallus gallus]
          Length = 157

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 15  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 66

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL---- 116
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++    
Sbjct: 67  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 110

Query: 117 -------------FCTGMKLKDCKTLACYGVK 135
                           G +L+D +TL+ Y ++
Sbjct: 111 QDKEGIPPDQQRWIFAGKQLEDGRTLSDYNIQ 142


>gi|399217583|emb|CCF74470.1| unnamed protein product [Babesia microti strain RI]
          Length = 282

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|440789929|gb|ELR11220.1| ubiquitin domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 224

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 40/153 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 64  ESTLHLVL----------------RLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVKDD 137
                      L   G +L+D +TLA Y ++ +
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 140


>gi|32400967|gb|AAP80689.1| polyubiquitin [Griffithsia japonica]
          Length = 246

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 28  KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 79

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 80  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENVKTKI 123

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 124 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 155



 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 180 KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 231

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 232 KESTLHLVL 240


>gi|58260904|ref|XP_567862.1| ATP-dependent protein binding protein [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134116983|ref|XP_772718.1| hypothetical protein CNBK0920 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255336|gb|EAL18071.1| hypothetical protein CNBK0920 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229943|gb|AAW46345.1| ATP-dependent protein binding protein, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 457

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 410

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442


>gi|336385317|gb|EGO26464.1| hypothetical protein SERLADRAFT_368035 [Serpula lacrymans var.
           lacrymans S7.9]
 gi|392571572|gb|EIW64744.1| ubiquitin [Trametes versicolor FP-101664 SS1]
 gi|395334250|gb|EJF66626.1| ubiquitin [Dichomitus squalens LYAD-421 SS1]
 gi|403414247|emb|CCM00947.1| predicted protein [Fibroporia radiculosa]
          Length = 381

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|70993888|ref|XP_751791.1| polyubiquitin UbiD/Ubi4 [Aspergillus fumigatus Af293]
 gi|66849425|gb|EAL89753.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus fumigatus Af293]
 gi|159125290|gb|EDP50407.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus fumigatus A1163]
          Length = 314

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 172 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 223

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 224 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 267

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 268 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 299



 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 33/152 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+      + I   +P+D ++ +     VK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLRLRGGMQIW--SPADSLITV-----VKTLTGKTITLEVESSDTIDNVKSKI 115

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 116 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 147


>gi|71008515|ref|XP_758220.1| hypothetical protein UM02073.1 [Ustilago maydis 521]
 gi|46097838|gb|EAK83071.1| hypothetical protein UM02073.1 [Ustilago maydis 521]
          Length = 387

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 36/152 (23%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST     C+   L + ++          ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTHSP--CSTLHLVLRLRG--------GMQIFVKTLTGKTITLEVESSDTIDNVKAKI 264

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 265 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 296



 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 321 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 372

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 373 KESTLHLVL 381


>gi|392569337|gb|EIW62510.1| ubiquitin 10.1 [Trametes versicolor FP-101664 SS1]
          Length = 463

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           +T+TL V  S+TI ++K  + E EG S D Q L FA  +L +GR L DY        N++
Sbjct: 321 RTITLEVRSSDTIDDVKAKIQEIEGISPDRQRLIFASKQLDDGRTLSDY--------NIQ 372

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 373 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 416

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 417 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 448



 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 397 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 448

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 449 KESTLHLVL 457


>gi|154312178|ref|XP_001555417.1| polyubiquitin [Botryotinia fuckeliana B05.10]
 gi|171682222|ref|XP_001906054.1| hypothetical protein [Podospora anserina S mat+]
 gi|3091264|gb|AAC15225.1| polyubiquitin [Botryotinia fuckeliana]
 gi|170941070|emb|CAP66720.1| unnamed protein product [Podospora anserina S mat+]
 gi|345566606|gb|EGX49548.1| hypothetical protein AOL_s00078g37 [Arthrobotrys oligospora ATCC
           24927]
 gi|347836850|emb|CCD51422.1| similar to polyubiquitin protein [Botryotinia fuckeliana]
 gi|393248123|gb|EJD55630.1| ubiquitin [Auricularia delicata TFB-10046 SS5]
 gi|409051494|gb|EKM60970.1| hypothetical protein PHACADRAFT_247222 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 305

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|402220063|gb|EJU00136.1| ubiquitin [Dacryopinax sp. DJM-731 SS1]
          Length = 381

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|336372502|gb|EGO00841.1| hypothetical protein SERLA73DRAFT_121253 [Serpula lacrymans var.
           lacrymans S7.3]
          Length = 371

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 153 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 204

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 205 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 248

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 249 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 280



 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 25/113 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 99



 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 305 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 356

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 357 KESTLHLVL 365



 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 52/152 (34%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q          +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQ----------HGRTLSDY--------NIQ 128

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 129 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 172

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 173 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 204


>gi|321263887|ref|XP_003196661.1| ATP-dependent protein binding protein [Cryptococcus gattii WM276]
 gi|317463138|gb|ADV24874.1| ATP-dependent protein binding protein, putative [Cryptococcus
           gattii WM276]
          Length = 381

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|124377858|tpd|FAA00319.1| TPA: polyubiquitin [Cryptococcus neoformans var. neoformans
           B-3501A]
          Length = 456

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 410

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442


>gi|296420280|ref|XP_002839703.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|13345367|gb|AAK19308.1| polyubiquitin [Tuber borchii]
 gi|295635897|emb|CAZ83894.1| unnamed protein product [Tuber melanosporum]
          Length = 306

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|403413175|emb|CCL99875.1| predicted protein [Fibroporia radiculosa]
          Length = 312

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 18  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 69

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 70  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 113

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 114 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 145



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 170 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 221

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 222 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 265

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 266 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 297


>gi|395328003|gb|EJF60398.1| polyubiquitin [Dichomitus squalens LYAD-421 SS1]
          Length = 305

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRPLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 182

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214



 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 291 KESTLHLVL 299


>gi|336372565|gb|EGO00904.1| hypothetical protein SERLA73DRAFT_178893 [Serpula lacrymans var.
           lacrymans S7.3]
          Length = 312

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 10/82 (12%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLF-CAIKVLSISVKA 81
           +EST+ L+F C +   S +V A
Sbjct: 291 KESTLHLVFVCVVVTKSSNVTA 312


>gi|405123351|gb|AFR98116.1| polyubiquitin [Cryptococcus neoformans var. grubii H99]
          Length = 381

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|114152964|gb|ABI52648.1| ubiquitin/40S ribosomal protein S27a fusion protein [Argas
           monolakensis]
          Length = 232

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVL----------------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140


>gi|45185626|ref|NP_983342.1| ACL062Cp [Ashbya gossypii ATCC 10895]
 gi|44981344|gb|AAS51166.1| ACL062Cp [Ashbya gossypii ATCC 10895]
 gi|374106548|gb|AEY95457.1| FACL062Cp [Ashbya gossypii FDAG1]
          Length = 382

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|167519655|ref|XP_001744167.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777253|gb|EDQ90870.1| predicted protein [Monosiga brevicollis MX1]
          Length = 153

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 30/146 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K KI          + K  +
Sbjct: 63  KESTLHLVLRLRGGMQIFVKTLSGKTITLEVEPSDSIENVKAKI----------QDKEGI 112

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVK 135
               + L   G +L+D +TL+ Y ++
Sbjct: 113 PPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|576773|gb|AAA82978.1| polyubiquitin [Cryptococcus neoformans var. grubii]
          Length = 381

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 291 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 334

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 335 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 366



 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|402224638|gb|EJU04700.1| polyubiquitin UbiD/Ubi4 [Dacryopinax sp. DJM-731 SS1]
          Length = 229

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|238580222|ref|XP_002389222.1| hypothetical protein MPER_11681 [Moniliophthora perniciosa FA553]
 gi|215451253|gb|EEB90152.1| hypothetical protein MPER_11681 [Moniliophthora perniciosa FA553]
          Length = 153

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|393245214|gb|EJD52725.1| ubiquitin [Auricularia delicata TFB-10046 SS5]
          Length = 305

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|302680697|ref|XP_003030030.1| polyubiquitin [Schizophyllum commune H4-8]
 gi|2739333|gb|AAB94630.1| polyubiquitin [Schizophyllum commune]
 gi|300103721|gb|EFI95127.1| polyubiquitin [Schizophyllum commune H4-8]
 gi|328770661|gb|EGF80702.1| polyubiquitin [Batrachochytrium dendrobatidis JAM81]
 gi|409044635|gb|EKM54116.1| hypothetical protein PHACADRAFT_257732 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 305

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|329665078|ref|NP_001193236.1| polyubiquitin-C [Bos taurus]
 gi|302595881|sp|P0CH28.1|UBC_BOVIN RecName: Full=Polyubiquitin-C; Contains: RecName:
           Full=Ubiquitin-related; Contains: RecName:
           Full=Ubiquitin; Flags: Precursor
          Length = 690

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+KG + EKEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 54.3 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 671

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 672 ESTLHLVL 679


>gi|363756558|ref|XP_003648495.1| hypothetical protein Ecym_8408 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356891695|gb|AET41678.1| Hypothetical protein Ecym_8408 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 153

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|309252551|gb|ADO60140.1| ubiquitin [Beauveria bassiana]
          Length = 215

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 1/49 (2%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDY 49
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 211


>gi|169844322|ref|XP_001828882.1| ubiquitin C [Coprinopsis cinerea okayama7#130]
 gi|170084089|ref|XP_001873268.1| ubiquitin [Laccaria bicolor S238N-H82]
 gi|302695715|ref|XP_003037536.1| hypothetical protein SCHCODRAFT_64979 [Schizophyllum commune H4-8]
 gi|116509994|gb|EAU92889.1| ubiquitin C [Coprinopsis cinerea okayama7#130]
 gi|164650820|gb|EDR15060.1| ubiquitin [Laccaria bicolor S238N-H82]
 gi|300111233|gb|EFJ02634.1| hypothetical protein SCHCODRAFT_64979 [Schizophyllum commune H4-8]
 gi|336385372|gb|EGO26519.1| hypothetical protein SERLADRAFT_385284 [Serpula lacrymans var.
           lacrymans S7.9]
 gi|390604125|gb|EIN13516.1| ubiquitin [Punctularia strigosozonata HHB-11173 SS5]
 gi|409083376|gb|EKM83733.1| hypothetical protein AGABI1DRAFT_81473 [Agaricus bisporus var.
           burnettii JB137-S8]
 gi|426201575|gb|EKV51498.1| ubiquitin [Agaricus bisporus var. bisporus H97]
 gi|443894847|dbj|GAC72194.1| ubiquitin and ubiquitin-like proteins [Pseudozyma antarctica T-34]
          Length = 305

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|239611163|gb|EEQ88150.1| ubiquitin [Ajellomyces dermatitidis ER-3]
          Length = 305

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 182

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214



 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE  +TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.5 bits (132), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 291 KESTLHLVL 299


>gi|170097832|ref|XP_001880135.1| ubiquitin [Laccaria bicolor S238N-H82]
 gi|395056|emb|CAA80851.1| ubiquitin [Phanerochaete chrysosporium]
 gi|164644573|gb|EDR08822.1| ubiquitin [Laccaria bicolor S238N-H82]
 gi|389741436|gb|EIM82624.1| ubiquitin [Stereum hirsutum FP-91666 SS1]
          Length = 381

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|402483942|gb|AFQ60003.1| polyubiquitin, partial [Solen grandis]
          Length = 275

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 1   KTITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 52

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   +I +     
Sbjct: 53  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDSIENVKAKI 96

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 97  QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 128



 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 42/147 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG  L +GR L DY        N++
Sbjct: 153 KTITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKHLEDGRTLSDY--------NIQ 204

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   +I +     
Sbjct: 205 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDSIENVKAKI 248

Query: 116 ------------LFCTGMKLKDCKTLA 130
                       L   G +L+D +TL+
Sbjct: 249 QDKESIPPDQQRLIFAGKQLEDGRTLS 275


>gi|365764258|gb|EHN05782.1| Ubi4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|452984043|gb|EME83800.1| hypothetical protein MYCFIDRAFT_60610 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 229

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|225558948|gb|EEH07231.1| ubiquitin [Ajellomyces capsulatus G186AR]
 gi|240281869|gb|EER45372.1| polyubiquitin [Ajellomyces capsulatus H143]
 gi|325088005|gb|EGC41315.1| polyubiquitin [Ajellomyces capsulatus H88]
          Length = 305

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 182

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE ++TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVESADTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 291 KESTLHLVL 299


>gi|388578851|gb|EIM19184.1| ubiquitin [Wallemia sebi CBS 633.66]
          Length = 701

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESQDTIDNVKTKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 214 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 265

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 266 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESQDTIDNVKTKI 309

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 310 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 341



 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 483 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 534

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  +++FVK LT + + L+V+   TI       
Sbjct: 535 KESTLHLVLR----------------LRGGMQVFVKTLTGKTITLEVESSDTIDNVKTKI 578

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 579 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 610



 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 51/177 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 366 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 417

Query: 61  RESTMQL--------------LFCAIKVL---------SISVKAPSDDILKLK--VKIFV 95
           +EST+ L              L  A K L         +I  ++    +L+L+  +++FV
Sbjct: 418 KESTLHLVLRLRGGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFV 477

Query: 96  KMLTEEIVKLKVKVLLTI-----------------RDLFCTGMKLKDCKTLACYGVK 135
           K LT + + L+V+   TI                 + L   G +L+D +TL+ Y ++
Sbjct: 478 KTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 534



 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 635 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 686

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 687 KESTLHLVL 695


>gi|320580936|gb|EFW95158.1| Ubiquitin C variant [Ogataea parapolymorpha DL-1]
          Length = 761

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 410

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 562

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594



 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N++  + +KEG   D + L FAG +L +GR L DY        N++
Sbjct: 619 KTITLEVESSDTIDNVESEIQDKEGIPPDQRRLIFAGMQLEDGRTLSDY--------NIQ 670

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 671 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 714

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 715 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 746



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 695 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 746

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 747 KESTLHLVL 755


>gi|261205776|ref|XP_002627625.1| ubiquitin [Ajellomyces dermatitidis SLH14081]
 gi|239592684|gb|EEQ75265.1| ubiquitin [Ajellomyces dermatitidis SLH14081]
          Length = 381

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 182

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 291 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 334

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 335 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 366



 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE  +TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|440638790|gb|ELR08709.1| polyubiquitin [Geomyces destructans 20631-21]
          Length = 381

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|406606462|emb|CCH42236.1| ubiquitin C [Wickerhamomyces ciferrii]
          Length = 383

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|389742108|gb|EIM83295.1| polyubiquitin [Stereum hirsutum FP-91666 SS1]
 gi|449546777|gb|EMD37746.1| polyubiquitin [Ceriporiopsis subvermispora B]
 gi|449550837|gb|EMD41801.1| polyubiquitin [Ceriporiopsis subvermispora B]
          Length = 457

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 410

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442


>gi|365986434|ref|XP_003670049.1| hypothetical protein NDAI_0D04930 [Naumovozyma dairenensis CBS 421]
 gi|410082970|ref|XP_003959063.1| hypothetical protein KAFR_0I01470 [Kazachstania africana CBS 2517]
 gi|444321755|ref|XP_004181533.1| hypothetical protein TBLA_0G00670 [Tetrapisispora blattae CBS 6284]
 gi|343768818|emb|CCD24806.1| hypothetical protein NDAI_0D04930 [Naumovozyma dairenensis CBS 421]
 gi|372465653|emb|CCF59928.1| hypothetical protein KAFR_0I01470 [Kazachstania africana CBS 2517]
 gi|387514578|emb|CCH62014.1| hypothetical protein TBLA_0G00670 [Tetrapisispora blattae CBS 6284]
          Length = 229

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|396492504|ref|XP_003843815.1| hypothetical protein LEMA_P014660.1 [Leptosphaeria maculans JN3]
 gi|312220395|emb|CBY00336.1| hypothetical protein LEMA_P014660.1 [Leptosphaeria maculans JN3]
          Length = 395

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 101 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 152

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 153 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 196

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 197 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 228



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 253 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 304

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 305 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 348

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 349 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 380


>gi|281208308|gb|EFA82486.1| ubiquitin [Polysphondylium pallidum PN500]
          Length = 443

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 28/138 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKL---KVKVLLTIRDLF 117
           +EST+ L+                  L+  ++IFVK LT + + L   K  +    + L 
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLIQDKEGIPPDQQRLI 106

Query: 118 CTGMKLKDCKTLACYGVK 135
             G +L+D +TL+ Y ++
Sbjct: 107 FAGKQLEDGRTLSDYNIQ 124



 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 149 KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 200

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 201 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKI 244

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 245 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 276



 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 301 KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 352

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 353 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKI 396

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 397 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 428


>gi|55783587|gb|AAV65292.1| polyubiquitin [Aspergillus fumigatus]
          Length = 304

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|255714909|ref|XP_002553736.1| KLTH0E05852p [Lachancea thermotolerans]
 gi|238935118|emb|CAR23299.1| KLTH0E05852p [Lachancea thermotolerans CBS 6340]
          Length = 409

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 115 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 166

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 167 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 210

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 211 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 242



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 267 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 318

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 319 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 362

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 363 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 394


>gi|46128781|ref|XP_388944.1| hypothetical protein FG08768.1 [Gibberella zeae PH-1]
 gi|189190970|ref|XP_001931824.1| ubiquitin [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|330938030|ref|XP_003305664.1| hypothetical protein PTT_18575 [Pyrenophora teres f. teres 0-1]
 gi|398405616|ref|XP_003854274.1| hypothetical protein MYCGRDRAFT_57170 [Zymoseptoria tritici IPO323]
 gi|187973430|gb|EDU40929.1| ubiquitin [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|311317170|gb|EFQ86204.1| hypothetical protein PTT_18575 [Pyrenophora teres f. teres 0-1]
 gi|339474157|gb|EGP89250.1| hypothetical protein MYCGRDRAFT_57170 [Zymoseptoria tritici IPO323]
 gi|344301515|gb|EGW31827.1| polyubiquitin [Spathaspora passalidarum NRRL Y-27907]
 gi|346970979|gb|EGY14431.1| ubiquitin [Verticillium dahliae VdLs.17]
 gi|358394958|gb|EHK44351.1| hypothetical protein TRIATDRAFT_300588 [Trichoderma atroviride IMI
           206040]
 gi|401882407|gb|EJT46666.1| hypothetical protein A1Q1_04737 [Trichosporon asahii var. asahii
           CBS 2479]
 gi|408390396|gb|EKJ69797.1| hypothetical protein FPSE_10045 [Fusarium pseudograminearum CS3096]
 gi|429860337|gb|ELA35078.1| ubiquitin [Colletotrichum gloeosporioides Nara gc5]
 gi|449302308|gb|EMC98317.1| hypothetical protein BAUCODRAFT_32336 [Baudoinia compniacensis UAMH
           10762]
 gi|452843190|gb|EME45125.1| hypothetical protein DOTSEDRAFT_70987 [Dothistroma septosporum
           NZE10]
          Length = 229

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|124377852|tpd|FAA00316.1| TPA: polyubiquitin [Eremothecium gossypii]
 gi|124377856|tpd|FAA00318.1| TPA: polyubiquitin [Saccharomyces paradoxus NRRL Y-17217]
          Length = 380

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|254585537|ref|XP_002498336.1| ZYRO0G07854p [Zygosaccharomyces rouxii]
 gi|238941230|emb|CAR29403.1| ZYRO0G07854p [Zygosaccharomyces rouxii]
          Length = 460

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 410

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442


>gi|392597236|gb|EIW86558.1| polyubiquitin [Coniophora puteana RWD-64-598 SS2]
          Length = 305

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|324532777|gb|ADY49258.1| Polyubiquitin, partial [Ascaris suum]
          Length = 187

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 30/146 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD +  +K KI          + K  +
Sbjct: 63  KESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKAKI----------QDKEGI 112

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVK 135
               + L   G +L+D +TL+ Y ++
Sbjct: 113 PPDQQRLIFAGKQLEDDRTLSDYNIQ 138


>gi|26353460|dbj|BAC40360.1| unnamed protein product [Mus musculus]
          Length = 153

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q + FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRVIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLDLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 139 KESTLHLVL 147


>gi|50307963|ref|XP_453980.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|302595952|sp|P0CG75.1|UBI4P_KLULA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|5531273|emb|CAB50898.1| polyubiquitin [Kluyveromyces lactis]
 gi|49643115|emb|CAG99067.1| KLLA0E00749p [Kluyveromyces lactis]
          Length = 381

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|116202449|ref|XP_001227036.1| polyubiquitin [Chaetomium globosum CBS 148.51]
 gi|126139705|ref|XP_001386375.1| hypothetical protein PICST_73878 [Scheffersomyces stipitis CBS
           6054]
 gi|255948832|ref|XP_002565183.1| Pc22g12390 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|367040177|ref|XP_003650469.1| hypothetical protein THITE_2072392 [Thielavia terrestris NRRL 8126]
 gi|389633097|ref|XP_003714201.1| polyubiquitin [Magnaporthe oryzae 70-15]
 gi|2894304|emb|CAA11267.1| polyubiquitin [Nicotiana tabacum]
 gi|3334645|emb|CAA07773.1| polyubiquitin [Gibberella pulicaris]
 gi|88177627|gb|EAQ85095.1| polyubiquitin [Chaetomium globosum CBS 148.51]
 gi|88766393|gb|ABD49716.1| polyubiquitin [Metarhizium anisopliae]
 gi|126093657|gb|ABN68346.1| predicted protein [Scheffersomyces stipitis CBS 6054]
 gi|211592200|emb|CAP98527.1| Pc22g12390 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|310800960|gb|EFQ35853.1| ubiquitin family protein [Glomerella graminicola M1.001]
 gi|322711004|gb|EFZ02578.1| ubiquitin [Metarhizium anisopliae ARSEF 23]
 gi|340516961|gb|EGR47207.1| polyubiquitin [Trichoderma reesei QM6a]
 gi|346997730|gb|AEO64133.1| hypothetical protein THITE_2072392 [Thielavia terrestris NRRL 8126]
 gi|351646534|gb|EHA54394.1| polyubiquitin [Magnaporthe oryzae 70-15]
 gi|358386330|gb|EHK23926.1| hypothetical protein TRIVIDRAFT_215920 [Trichoderma virens Gv29-8]
 gi|361129858|gb|EHL01740.1| putative Polyubiquitin [Glarea lozoyensis 74030]
 gi|378733143|gb|EHY59602.1| polyubiquitin [Exophiala dermatitidis NIH/UT8656]
 gi|402085157|gb|EJT80055.1| polyubiquitin [Gaeumannomyces graminis var. tritici R3-111a-1]
 gi|406701275|gb|EKD04425.1| hypothetical protein A1Q2_01309 [Trichosporon asahii var. asahii
           CBS 8904]
 gi|406867327|gb|EKD20365.1| ubiquitin [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
 gi|407920052|gb|EKG13270.1| Ubiquitin [Macrophomina phaseolina MS6]
 gi|453085016|gb|EMF13059.1| ubiquitin [Mycosphaerella populorum SO2202]
          Length = 305

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|164661299|ref|XP_001731772.1| hypothetical protein MGL_1040 [Malassezia globosa CBS 7966]
 gi|159105673|gb|EDP44558.1| hypothetical protein MGL_1040 [Malassezia globosa CBS 7966]
          Length = 154

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|156841217|ref|XP_001643983.1| hypothetical protein Kpol_1070p6 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114615|gb|EDO16125.1| hypothetical protein Kpol_1070p6 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 533

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 410

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 519 KESTLHLVL 527


>gi|156064327|ref|XP_001598085.1| polyubiquitin [Sclerotinia sclerotiorum 1980]
 gi|154691033|gb|EDN90771.1| polyubiquitin [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 305

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL  Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLLDYNIQ 290


>gi|146421245|ref|XP_001486573.1| ubiquitin [Meyerozyma guilliermondii ATCC 6260]
 gi|146389988|gb|EDK38146.1| ubiquitin [Meyerozyma guilliermondii ATCC 6260]
          Length = 457

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 410

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442


>gi|169847035|ref|XP_001830230.1| ubiquitin [Coprinopsis cinerea okayama7#130]
 gi|116508706|gb|EAU91601.1| ubiquitin [Coprinopsis cinerea okayama7#130]
          Length = 305

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|114159828|gb|ABI53721.1| polyubiquitin [Pyropia yezoensis]
          Length = 457

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 410

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442


>gi|6322989|ref|NP_013061.1| ubiquitin [Saccharomyces cerevisiae S288c]
 gi|260940391|ref|XP_002614495.1| ubiquitin [Clavispora lusitaniae ATCC 42720]
 gi|302595956|sp|P0CG63.1|UBI4P_YEAST RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|4734|emb|CAA29198.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|1360231|emb|CAA97489.1| UBI4 [Saccharomyces cerevisiae]
 gi|151941132|gb|EDN59510.1| poly-ubiquitin [Saccharomyces cerevisiae YJM789]
 gi|190406010|gb|EDV09277.1| hypothetical protein SCRG_04952 [Saccharomyces cerevisiae RM11-1a]
 gi|238851681|gb|EEQ41145.1| ubiquitin [Clavispora lusitaniae ATCC 42720]
 gi|259147952|emb|CAY81201.1| Ubi4p [Saccharomyces cerevisiae EC1118]
 gi|285813387|tpg|DAA09283.1| TPA: ubiquitin [Saccharomyces cerevisiae S288c]
 gi|323336529|gb|EGA77795.1| Ubi4p [Saccharomyces cerevisiae Vin13]
 gi|349579690|dbj|GAA24851.1| K7_Ubi4p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 381

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|118399883|ref|XP_001032265.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89286605|gb|EAR84602.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 1252

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2    KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
            KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 1034 KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 1086

Query: 62   ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
            EST+ L                  +L+L+  ++IFVK LT + + L V+   TI +    
Sbjct: 1087 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAK 1128

Query: 116  -------------LFCTGMKLKDCKTLACYGVKDD 137
                         L   G +L+D +TL+ Y ++ +
Sbjct: 1129 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 1163



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 7/68 (10%)

Query: 2    KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
            KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 1186 KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 1238

Query: 62   ESTMQLLF 69
            EST+ L+ 
Sbjct: 1239 ESTLHLVL 1246


>gi|83305995|emb|CAE00783.1| polyubiquitin homolog [Sordaria macrospora]
          Length = 208

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 75  KTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 126

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 127 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKI 170

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 171 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 202



 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 42/150 (28%)

Query: 4   VTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRE 62
           +TL VE S+TI N+K  + +KE    D Q L FAG +L +GR L DY        N+++E
Sbjct: 1   ITLEVESSDTIDNVKQKIQDKEDIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKE 52

Query: 63  STMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI--------- 113
           ST+ L+                  L+  ++IFVK LT + + L+V+   TI         
Sbjct: 53  STLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQD 96

Query: 114 --------RDLFCTGMKLKDCKTLACYGVK 135
                   + L   G +L+D +TL+ Y ++
Sbjct: 97  KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 126


>gi|3776536|gb|AAC64787.1| polyubiquitin [Schizosaccharomyces pombe]
          Length = 610

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 410

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 562

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594


>gi|115492305|ref|XP_001210780.1| ubiquitin [Aspergillus terreus NIH2624]
 gi|149242950|ref|XP_001526489.1| hypothetical protein LELG_03047 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|169771599|ref|XP_001820269.1| ubiquitin [Aspergillus oryzae RIB40]
 gi|212542037|ref|XP_002151173.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces marneffei ATCC
           18224]
 gi|238485820|ref|XP_002374148.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus flavus NRRL3357]
 gi|242769894|ref|XP_002341866.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces stipitatus ATCC
           10500]
 gi|448097159|ref|XP_004198602.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
 gi|448111178|ref|XP_004201781.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
 gi|83768128|dbj|BAE58267.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|114197640|gb|EAU39340.1| ubiquitin [Aspergillus terreus NIH2624]
 gi|146450612|gb|EDK44868.1| hypothetical protein LELG_03047 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|210066080|gb|EEA20173.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces marneffei ATCC
           18224]
 gi|218725062|gb|EED24479.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces stipitatus ATCC
           10500]
 gi|220699027|gb|EED55366.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus flavus NRRL3357]
 gi|359380024|emb|CCE82265.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
 gi|359464770|emb|CCE88475.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
 gi|391871753|gb|EIT80910.1| ubiquitin and ubiquitin-like protein [Aspergillus oryzae 3.042]
          Length = 305

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|50286405|ref|XP_445631.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524936|emb|CAG58542.1| unnamed protein product [Candida glabrata]
          Length = 533

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 410

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 519 KESTLHLVL 527


>gi|374717833|gb|AEZ66647.1| putative beta-1,6-glucanase [Wickerhamomyces anomalus]
 gi|374717835|gb|AEZ66648.1| putative beta-1,6-glucanase [Wickerhamomyces anomalus]
          Length = 381

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|344243115|gb|EGV99218.1| Ubiquitin [Cricetulus griseus]
          Length = 430

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D + L+ Y ++ +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKE 140



 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE  +TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPRDTIENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPRDTIENVKAWI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D + L+ Y ++ +
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 25/114 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE  +TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEPRDTIENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIR 114
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI+
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSNTIK 404


>gi|226289971|gb|EEH45455.1| ubiquitin [Paracoccidioides brasiliensis Pb18]
          Length = 305

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 182

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214



 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE  +TI ++K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESVDTIDSVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 291 KESTLHLVL 299


>gi|50423807|ref|XP_460488.1| DEHA2F02816p [Debaryomyces hansenii CBS767]
 gi|210076178|ref|XP_504128.2| YALI0E18986p [Yarrowia lipolytica]
 gi|49656157|emb|CAG88798.1| DEHA2F02816p [Debaryomyces hansenii CBS767]
 gi|199426939|emb|CAG79723.2| YALI0E18986p [Yarrowia lipolytica CLIB122]
 gi|392574761|gb|EIW67896.1| hypothetical protein TREMEDRAFT_44902 [Tremella mesenterica DSM
           1558]
          Length = 457

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 410

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442


>gi|366992347|ref|XP_003675939.1| hypothetical protein NCAS_0C05850 [Naumovozyma castellii CBS 4309]
 gi|342301804|emb|CCC69575.1| hypothetical protein NCAS_0C05850 [Naumovozyma castellii CBS 4309]
          Length = 388

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|295661227|ref|XP_002791169.1| ubiquitin [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226281096|gb|EEH36662.1| ubiquitin [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 305

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 182

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE  +TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVESGDTIDGVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 291 KESTLHLVL 299


>gi|213401917|ref|XP_002171731.1| ubiquitin [Schizosaccharomyces japonicus yFS275]
 gi|211999778|gb|EEB05438.1| ubiquitin [Schizosaccharomyces japonicus yFS275]
          Length = 382

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|169607224|ref|XP_001797032.1| hypothetical protein SNOG_06667 [Phaeosphaeria nodorum SN15]
 gi|111065378|gb|EAT86498.1| hypothetical protein SNOG_06667 [Phaeosphaeria nodorum SN15]
          Length = 234

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|328867151|gb|EGG15534.1| ubiquitin [Dictyostelium fasciculatum]
          Length = 380

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292


>gi|350592414|ref|XP_003483459.1| PREDICTED: polyubiquitin-C isoform 1 [Sus scrofa]
 gi|350592416|ref|XP_003483460.1| PREDICTED: polyubiquitin-C isoform 2 [Sus scrofa]
 gi|350592418|ref|XP_003483461.1| PREDICTED: polyubiquitin-C isoform 3 [Sus scrofa]
 gi|350592420|ref|XP_003483462.1| PREDICTED: polyubiquitin-C isoform 4 [Sus scrofa]
 gi|302595945|sp|P0CG68.1|UBC_PIG RecName: Full=Polyubiquitin-C; Contains: RecName:
           Full=Ubiquitin-related; Contains: RecName:
           Full=Ubiquitin; Flags: Precursor
          Length = 533

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+KG + EKEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 520 ESTLHLVL 527


>gi|156396888|ref|XP_001637624.1| predicted protein [Nematostella vectensis]
 gi|156224738|gb|EDO45561.1| predicted protein [Nematostella vectensis]
          Length = 147

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 78/154 (50%), Gaps = 29/154 (18%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKA----------PSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           +EST+ L+      + ISVKA           SD +  +K KI       E +  KV+ L
Sbjct: 63  KESTLHLVLRLRGGMQISVKAHWKTFTLDVEASDTVESVKEKI----QNREGIPPKVQRL 118

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVKDDRGVACFI 144
           L   +      +L D ++LA Y +K    +  F+
Sbjct: 119 LYEEE------ELVDNRSLADYNIKQGSILHLFL 146


>gi|397614491|gb|EJK62831.1| hypothetical protein THAOC_16543 [Thalassiosira oceanica]
          Length = 240

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 98  KTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 149

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI       
Sbjct: 150 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKI 193

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 194 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 225


>gi|343960965|dbj|BAK62072.1| ubiquitin [Pan troglodytes]
          Length = 177

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D + L+ Y ++ +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRALSDYNIQKE 140


>gi|68472143|ref|XP_719867.1| hypothetical protein CaO19.6771 [Candida albicans SC5314]
 gi|68472378|ref|XP_719750.1| hypothetical protein CaO19.14063 [Candida albicans SC5314]
 gi|3687425|emb|CAA76783.1| polyubiquitin [Candida albicans]
 gi|46441582|gb|EAL00878.1| hypothetical protein CaO19.14063 [Candida albicans SC5314]
 gi|46441708|gb|EAL01003.1| hypothetical protein CaO19.6771 [Candida albicans SC5314]
 gi|238881109|gb|EEQ44747.1| hypothetical protein CAWG_03035 [Candida albicans WO-1]
 gi|354545623|emb|CCE42351.1| hypothetical protein CPAR2_809000 [Candida parapsilosis]
          Length = 229

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|5523969|gb|AAD44037.1|AF104020_1 polyprotein [Bovine viral diarrhea virus 2]
          Length = 318

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D + L FAG +L +GR L DY        N++
Sbjct: 120 KTITLEVEPSDTIENVKAKIQDKEGIPPDQRRLIFAGKQLEDGRTLSDY--------NIQ 171

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 172 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 215

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 216 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 249



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 196 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 247

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 248 KESTLHLVL 256


>gi|290979900|ref|XP_002672671.1| polyubiquitin [Naegleria gruberi]
 gi|284086249|gb|EFC39927.1| polyubiquitin [Naegleria gruberi]
          Length = 293

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE ++TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 151 KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 202

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 203 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESNDTIENVKSKI 246

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 247 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 278



 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 42/151 (27%)

Query: 3   TVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKR 61
           T+TL VE ++TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N+++
Sbjct: 76  TITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQK 127

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 128 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQ 171

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TL+ Y ++
Sbjct: 172 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 202


>gi|241953793|ref|XP_002419618.1| ubiquitin, putative [Candida dubliniensis CD36]
 gi|302595951|sp|P0CG74.1|UBI4P_CANAL RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|2437825|emb|CAA90901.1| polyubiquitin [Candida albicans]
 gi|223642958|emb|CAX43214.1| ubiquitin, putative [Candida dubliniensis CD36]
          Length = 305

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|327356699|gb|EGE85556.1| hypothetical protein BDDG_08501 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 333

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 115 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 166

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 167 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 210

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 211 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 242



 Score = 55.5 bits (132), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 267 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 318

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 319 KESTLHLVL 327



 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 38/164 (23%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE  +TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  REST----------MQLLFCAIKVLSI--SVKAPSDDILKLKVKIFVKMLTEEIVKLKVK 108
           +EST          MQ+     +VLS         +  L   ++  VK LT + + L+V+
Sbjct: 63  KESTLHLVLRLRGGMQICMSFEQVLSYIDMFYVRENQALTYTLQTVVKTLTGKTITLEVE 122

Query: 109 VLLTI-----------------RDLFCTGMKLKDCKTLACYGVK 135
              TI                 + L   G +L+D +TL+ Y ++
Sbjct: 123 SSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 166


>gi|323452163|gb|EGB08038.1| polyubiquitin [Aureococcus anophagefferens]
          Length = 305

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|260806905|ref|XP_002598324.1| hypothetical protein BRAFLDRAFT_113894 [Branchiostoma floridae]
 gi|229283596|gb|EEN54336.1| hypothetical protein BRAFLDRAFT_113894 [Branchiostoma floridae]
          Length = 600

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 21/139 (15%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 391 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 443

Query: 62  ESTMQLLFCAI---KVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDLFC 118
           EST+ L+F      K +++ V+ PSD I  +K KI          + K  +    + L  
Sbjct: 444 ESTLHLIFVKTLTGKTITLEVE-PSDTIENVKAKI----------QDKEGIPPDQQRLIF 492

Query: 119 TGMKLKDCKTLACYGVKDD 137
            G +L+D +TL+ Y ++ +
Sbjct: 493 AGKQLEDGRTLSDYNIQKE 511



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 458 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 510

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 511 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 552

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 553 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 587


>gi|67523087|ref|XP_659604.1| hypothetical protein AN2000.2 [Aspergillus nidulans FGSC A4]
 gi|40744745|gb|EAA63901.1| hypothetical protein AN2000.2 [Aspergillus nidulans FGSC A4]
          Length = 323

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 181 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 232

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 233 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKI 276

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 277 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 308



 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 29  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 80

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 81  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKI 124

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 125 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 156


>gi|365759560|gb|EHN01342.1| Ubi4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|392297682|gb|EIW08781.1| Ubi4p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 153

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|255732802|ref|XP_002551324.1| ubiquitin [Candida tropicalis MYA-3404]
 gi|240131065|gb|EER30626.1| ubiquitin [Candida tropicalis MYA-3404]
          Length = 299

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 42/151 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGV 134
                     + L   G +L+D +TL+ Y +
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289


>gi|225682563|gb|EEH20847.1| ubiquitin [Paracoccidioides brasiliensis Pb03]
          Length = 305

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 182

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214



 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE  +TI ++K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESVDTIDSVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLTDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 291 KESTLHLVL 299


>gi|449662451|ref|XP_004205544.1| PREDICTED: polyubiquitin-B-like isoform 2 [Hydra magnipapillata]
          Length = 304

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE ++TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE ++TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|328353975|emb|CCA40372.1| Ubiquitin cross-reactive protein [Komagataella pastoris CBS 7435]
          Length = 386

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|119500448|ref|XP_001266981.1| polyubiquitin (UbiD), putative [Neosartorya fischeri NRRL 181]
 gi|121707680|ref|XP_001271909.1| polyubiquitin (UbiD), putative [Aspergillus clavatus NRRL 1]
 gi|119400057|gb|EAW10483.1| polyubiquitin (UbiD), putative [Aspergillus clavatus NRRL 1]
 gi|119415146|gb|EAW25084.1| polyubiquitin (UbiD), putative [Neosartorya fischeri NRRL 181]
          Length = 305

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|322699454|gb|EFY91215.1| ubiquitin [Metarhizium acridum CQMa 102]
          Length = 343

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 49  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 100

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 101 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 144

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 145 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 176



 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 201 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 252

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 253 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 296

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 297 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 328


>gi|335345806|gb|AEH41483.1| ubiquitin [Endocarpon pusillum]
          Length = 305

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +E T+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KEFTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|124377854|tpd|FAA00317.1| TPA: polyubiquitin [Aspergillus nidulans FGSC A4]
          Length = 304

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|19112201|ref|NP_595409.1| ubiquitin [Schizosaccharomyces pombe 972h-]
 gi|302595955|sp|P0CG72.1|UBI4P_SCHPO RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|3738185|emb|CAA21278.1| ubiquitin [Schizosaccharomyces pombe]
          Length = 382

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|323303927|gb|EGA57707.1| Ubi4p [Saccharomyces cerevisiae FostersB]
          Length = 248

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 182

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214



 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG  L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKXLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|259487366|tpe|CBF85986.1| TPA: Polyubiquitin Fragment [Source:UniProtKB/TrEMBL;Acc:A2RVC1]
           [Aspergillus nidulans FGSC A4]
          Length = 305

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|92790170|emb|CAI83754.1| Polyubiqutin 1 [Polyplastron multivesiculatum]
          Length = 379

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 9   KTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 61

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 62  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQ 105

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 106 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 136



 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 161 KTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 213

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 214 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQ 257

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 258 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 288



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 313 KTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 365

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 366 ESTLHLVL 373


>gi|92790178|emb|CAI83758.1| Polyubiqutin 5 [Polyplastron multivesiculatum]
          Length = 220

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 2   KTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 54

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 55  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQ 98

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 99  DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 129



 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 154 KTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 206

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 207 ESTLHLVL 214


>gi|403217874|emb|CCK72367.1| hypothetical protein KNAG_0J02880 [Kazachstania naganishii CBS
           8797]
          Length = 153

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|92790172|emb|CAI83755.1| Polyubiqutin 2 [Polyplastron multivesiculatum]
          Length = 346

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 52  KTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 104

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 105 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQ 148

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 149 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 179



 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 204 KTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 256

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 257 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQ 300

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 301 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 331


>gi|254574192|ref|XP_002494205.1| Ubiquitin [Komagataella pastoris GS115]
 gi|238034004|emb|CAY72026.1| Ubiquitin [Komagataella pastoris GS115]
          Length = 310

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|353230196|emb|CCD76367.1| putative ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
          Length = 247

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 48/171 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKD----DRGVA--CFISDIC 148
                       L   G +L+D +TL+   +++      GVA   + +D C
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDLHIQERVHSSLGVASSWWYADFC 157


>gi|323448851|gb|EGB04744.1| ubiquitin [Aureococcus anophagefferens]
          Length = 229

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|320031616|gb|EFW13576.1| ubiquitin [Coccidioides posadasii str. Silveira]
          Length = 625

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 46/156 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 331 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 382

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD--- 115
           +EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +   
Sbjct: 383 KESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT 424

Query: 116 --------------LFCTGMKLKDCKTLACYGVKDD 137
                         L   G +L+D +TL+ Y ++ +
Sbjct: 425 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 460



 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 46/156 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 483 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 534

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD--- 115
           +EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +   
Sbjct: 535 KESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT 576

Query: 116 --------------LFCTGMKLKDCKTLACYGVKDD 137
                         L   G +L+D +TL+ Y ++ +
Sbjct: 577 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 612


>gi|124784704|gb|ABN14989.1| polyubiquitin [Taenia asiatica]
          Length = 200

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 30/146 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 53  KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 104

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K KI          + K  +
Sbjct: 105 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKI----------QDKEGI 154

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVK 135
               + L   G +L+D +TL+ Y ++
Sbjct: 155 PPDQQRLIFAGKQLEDGRTLSDYNIQ 180


>gi|388518367|gb|AFK47245.1| unknown [Medicago truncatula]
          Length = 233

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTIILEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLVFAGKQLEDGRTLADYNIQ 138



 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 87  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLVFAGKQLEDGR-------TLADYNIQK 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 140 ESTLHLVLR----------------LRGGMQIFVKALTGKTITLEVESSDTIDNVKAKIQ 183

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA   ++
Sbjct: 184 DKEGIPPDQQRLIFAGKQLEDGRTLADNNIQ 214



 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADNNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|357474763|ref|XP_003607667.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula]
 gi|355508722|gb|AES89864.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 752

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 230 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 282

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 283 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 324

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TLA Y ++ +
Sbjct: 325 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 359



 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 382 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 434

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 435 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 476

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TLA Y ++ +
Sbjct: 477 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 511



 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 534 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 586

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 587 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 628

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TLA Y ++ +
Sbjct: 629 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 663



 Score = 56.2 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 686 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 738

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 739 ESTLHLVL 746


>gi|71020945|ref|XP_760703.1| hypothetical protein UM04556.1 [Ustilago maydis 521]
 gi|46100297|gb|EAK85530.1| hypothetical protein UM04556.1 [Ustilago maydis 521]
          Length = 286

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 69  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 120

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 121 KESTLHLVL----------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 164

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVKDD 137
                     + L   G +L+D +TL+ Y ++ +
Sbjct: 165 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 198


>gi|426263332|emb|CCG34086.1| Polyubiquitin [uncultured eukaryote]
          Length = 304

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMRIFVKTLTGKTITLEVESSDTIDNVKSKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|1326022|emb|CAA25706.1| unnamed protein product [Saccharomyces cerevisiae]
          Length = 191

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 49  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 100

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 101 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 144

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 145 QDKEGIPPDQQRLIFAGNQLEDGRTLSDYNIQ 176



 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG++L +GR L DY        N++
Sbjct: 125 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGNQLEDGRTLSDY--------NIQ 176

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 177 KESTLHLVL 185


>gi|281212331|gb|EFA86491.1| hypothetical protein PPL_00285 [Polysphondylium pallidum PN500]
          Length = 1074

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 25/135 (18%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDLFCTG 120
           +EST+ L      VL +     SD I  +K KI          + K  +    + L   G
Sbjct: 215 KESTLHL------VLRLRGVEGSDTIENVKTKI----------QDKEGIPPDQQRLIFAG 258

Query: 121 MKLKDCKTLACYGVK 135
            +L+D +TL+ Y ++
Sbjct: 259 KQLEDGRTLSDYNIQ 273


>gi|224321|prf||1101405A ubiquitin precursor
          Length = 191

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 49  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 100

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 101 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 144

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 145 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 176


>gi|290974051|ref|XP_002669760.1| polyubiquitin [Naegleria gruberi]
 gi|284083311|gb|EFC37016.1| polyubiquitin [Naegleria gruberi]
          Length = 274

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE ++TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 132 KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 183

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 184 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESNDTIENVKSKI 227

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 228 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 259



 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 57/182 (31%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE ++TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSI---------SVKAPSDD-------------------ILKLK-- 90
           +EST+ L     K +++         +VK PS                     +L+L+  
Sbjct: 63  KESTLHLTLTG-KTITLEVESNDTIENVKYPSRSTKIDLSLVSNWKMESTLHLVLRLRGG 121

Query: 91  VKIFVKMLTEEIVKLKVKVLLTIRD-----------------LFCTGMKLKDCKTLACYG 133
           ++IFVK LT + + L+V+   TI +                 L   G +L+D +TL+ Y 
Sbjct: 122 MQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 181

Query: 134 VK 135
           ++
Sbjct: 182 IQ 183


>gi|340059193|emb|CCC53576.1| putative polyubiquitin [Trypanosoma vivax Y486]
          Length = 282

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 40/153 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        LA  N+++
Sbjct: 48  KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLADYNIQK 100

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 101 ESTLHLVLR----------------LRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQ 144

Query: 116 -----------LFCTGMKLKDCKTLACYGVKDD 137
                      L   G +L++ +TLA Y ++ +
Sbjct: 145 DKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKE 177



 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 7/79 (8%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        LA  N+++
Sbjct: 200 KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLADYNIQK 252

Query: 62  ESTMQLLFCAIKVLSISVK 80
           EST+ L+      + I VK
Sbjct: 253 ESTLHLVLRLRGGMQIFVK 271


>gi|219118861|ref|XP_002180197.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|219118863|ref|XP_002180198.1| ubiquitin extension protein 4 [Phaeodactylum tricornutum CCAP
           1055/1]
 gi|217408454|gb|EEC48388.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408455|gb|EEC48389.1| ubiquitin extension protein 4 [Phaeodactylum tricornutum CCAP
           1055/1]
          Length = 381

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|154275270|ref|XP_001538486.1| polyubiquitin [Ajellomyces capsulatus NAm1]
 gi|150414926|gb|EDN10288.1| polyubiquitin [Ajellomyces capsulatus NAm1]
          Length = 305

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVENSDTIDNVKSKI 182

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214



 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE ++TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVESADTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 291 KESTLHLVL 299


>gi|320162850|gb|EFW39749.1| polyubiquitin 5 [Capsaspora owczarzaki ATCC 30864]
          Length = 218

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI +     
Sbjct: 63  KESTLHLVL----------------RLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|217074596|gb|ACJ85658.1| unknown [Medicago truncatula]
          Length = 228

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTIILEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLVFAGKQLEDGRTLADYNIQ 138



 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 23/112 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 87  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLVFAGKQLEDGR-------TLADYNIQK 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 140 ESTLHLVLR----------------LRGGMQIFVKALTGKTITLEVESSDTI 175



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 8/67 (11%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG+ L  G         L+   +++
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNLRMG--------GLSLIYIQK 214

Query: 62  ESTMQLL 68
           EST+ L+
Sbjct: 215 ESTLHLV 221


>gi|2209091|gb|AAB61405.1| ubiquitin [Tetrahymena vorax]
          Length = 153

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +G       + L+  N+++
Sbjct: 11  KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-------ITLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TL+ Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 139 KESTLHLVL 147


>gi|60417384|emb|CAI59819.1| ubiquitin [Nyctotherus ovalis]
          Length = 208

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE ++TI+ +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 1   KTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 53

Query: 62  ESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+      + I VK            P+D I ++K KI          + K  + 
Sbjct: 54  ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPNDTIEQVKAKI----------QDKEGIP 103

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L+D +TLA Y ++
Sbjct: 104 PDQQRLIFAGKQLEDGRTLADYNIQ 128



 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 7/63 (11%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE ++TI+ +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 153 KTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 205

Query: 62  EST 64
           EST
Sbjct: 206 EST 208


>gi|367006115|ref|XP_003687789.1| hypothetical protein TPHA_0K02250 [Tetrapisispora phaffii CBS 4417]
 gi|357526094|emb|CCE65355.1| hypothetical protein TPHA_0K02250 [Tetrapisispora phaffii CBS 4417]
          Length = 153

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|340504493|gb|EGR30931.1| ubiquitin family protein, putative [Ichthyophthirius multifiliis]
          Length = 329

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 35  KTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 86

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   +I +     
Sbjct: 87  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDSIENVKAKI 130

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 131 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 162



 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 187 KTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 238

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L V+   +I +     
Sbjct: 239 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDSIENVKAKI 282

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 283 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 314


>gi|328864943|gb|EGG13329.1| hypothetical protein DFA_11090 [Dictyostelium fasciculatum]
          Length = 356

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 33/135 (24%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDLFCTG 120
           +EST+ L+                  L+  ++IFVK LT         +    + L   G
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLT--------GIPPDQQRLIFAG 250

Query: 121 MKLKDCKTLACYGVK 135
            +L+D +TL+ Y ++
Sbjct: 251 KQLEDGRTLSDYNIQ 265



 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 290 KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 341

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 342 KESTLHLVL 350


>gi|290987764|ref|XP_002676592.1| polyubiquitin [Naegleria gruberi]
 gi|290995460|ref|XP_002680313.1| polyubiquitin [Naegleria gruberi]
 gi|284090195|gb|EFC43848.1| polyubiquitin [Naegleria gruberi]
 gi|284093933|gb|EFC47569.1| polyubiquitin [Naegleria gruberi]
          Length = 305

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE ++TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESNDTIENVKSKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE ++TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESNDTIENVKSKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|290984061|ref|XP_002674746.1| polyubiquitin [Naegleria gruberi]
 gi|284088338|gb|EFC42002.1| polyubiquitin [Naegleria gruberi]
          Length = 229

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE ++TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESNDTIENVKSKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE ++TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|323451976|gb|EGB07851.1| ubiquitin [Aureococcus anophagefferens]
          Length = 153

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 30/146 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K KI          + K  +
Sbjct: 63  KESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKI----------QDKEGI 112

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVK 135
               + L   G +L+D +TL+ Y ++
Sbjct: 113 PPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|239788927|dbj|BAH71116.1| ACYPI006410 [Acyrthosiphon pisum]
          Length = 154

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDSIENVKAKI 106

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|92790176|emb|CAI83757.1| Polyubiqutin 4 [Polyplastron multivesiculatum]
          Length = 177

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L + R        LA  N+++
Sbjct: 35  KTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNR-------TLADYNIQK 87

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 88  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQ 131

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 132 DKEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 162


>gi|330790588|ref|XP_003283378.1| ubiquitin [Dictyostelium purpureum]
 gi|325086643|gb|EGC40029.1| ubiquitin [Dictyostelium purpureum]
 gi|328867190|gb|EGG15573.1| ubiquitin [Dictyostelium fasciculatum]
          Length = 381

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|82568440|dbj|BAE48510.1| polyubiquitin [Raphidiophrys contractilis]
          Length = 173

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 4   KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 55

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 56  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDSIENVKAKI 99

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 100 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 131


>gi|28436474|gb|AAO43304.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 325

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KE    D Q L FAG +L +GR        LA  N+++
Sbjct: 182 KTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 234

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 235 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQ 278

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 279 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 309



 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 40/146 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 31  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 83

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 84  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 127

Query: 114 ---------RDLFCTGMKLKDCKTLA 130
                    + L   G +L+D +TLA
Sbjct: 128 DKEGIPPDQQRLIFAGKQLEDGRTLA 153



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 258 KTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 310

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 311 ESTLHLVL 318


>gi|302595947|sp|P0CG73.1|UBI1P_CANAL RecName: Full=Polyubiquitin; Contains: RecName:
           Full=Ubiquitin-related; Contains: RecName:
           Full=Ubiquitin; Flags: Precursor
 gi|1143188|gb|AAA84868.1| ubiquitin precursor [Candida albicans]
          Length = 229

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+  +                +  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLRS----------------RGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|336271700|ref|XP_003350608.1| hypothetical protein SMAC_07925 [Sordaria macrospora k-hell]
 gi|380089527|emb|CCC12626.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 229

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|330797961|ref|XP_003287025.1| ubiquitin [Dictyostelium purpureum]
 gi|325082988|gb|EGC36453.1| ubiquitin [Dictyostelium purpureum]
          Length = 365

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 26/136 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDLFCTG 120
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++    
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKI 258

Query: 121 M-KLKDCKTLACYGVK 135
             K +D +TL+ Y ++
Sbjct: 259 QDKEEDGRTLSDYNIQ 274



 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 299 KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 350

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 351 KESTLHLVL 359


>gi|193627304|ref|XP_001947010.1| PREDICTED: polyubiquitin-G-like [Acyrthosiphon pisum]
          Length = 381

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDSIENVKAKI 106

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDSIENVKAKI 258

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|85091236|ref|XP_958803.1| polyubiquitin [Neurospora crassa OR74A]
 gi|302595953|sp|P0CG70.1|UBI4P_NEUCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|295930|emb|CAA31530.1| ubiquitin [Neurospora crassa]
 gi|28920189|gb|EAA29567.1| polyubiquitin [Neurospora crassa OR74A]
 gi|336466506|gb|EGO54671.1| polyubiquitin [Neurospora tetrasperma FGSC 2508]
 gi|350286609|gb|EGZ67856.1| polyubiquitin [Neurospora tetrasperma FGSC 2509]
          Length = 305

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|330805713|ref|XP_003290823.1| hypothetical protein DICPUDRAFT_92560 [Dictyostelium purpureum]
 gi|325079033|gb|EGC32654.1| hypothetical protein DICPUDRAFT_92560 [Dictyostelium purpureum]
          Length = 229

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|193678764|ref|XP_001950434.1| PREDICTED: polyubiquitin-A-like [Acyrthosiphon pisum]
          Length = 686

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDSIENVKAKI 106

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDSIENVKAKI 258

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDSIENVKAKI 410

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDSIENVKAKI 562

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594



 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 619 KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 670

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 671 KESTLHLVL 679


>gi|239788925|dbj|BAH71115.1| ACYPI006410 [Acyrthosiphon pisum]
          Length = 230

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDSIENVKAKI 106

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +E T+ L+ 
Sbjct: 215 KEFTLHLVL 223


>gi|302496049|ref|XP_003010029.1| polyubiquitin UbiD/Ubi4, putative [Arthroderma benhamiae CBS
           112371]
 gi|315043104|ref|XP_003170928.1| ubiquitin [Arthroderma gypseum CBS 118893]
 gi|327295188|ref|XP_003232289.1| polyubiquitin [Trichophyton rubrum CBS 118892]
 gi|291173564|gb|EFE29389.1| polyubiquitin UbiD/Ubi4, putative [Arthroderma benhamiae CBS
           112371]
 gi|311344717|gb|EFR03920.1| ubiquitin [Arthroderma gypseum CBS 118893]
 gi|326465461|gb|EGD90914.1| polyubiquitin [Trichophyton rubrum CBS 118892]
 gi|326473983|gb|EGD97992.1| polyubiquitin [Trichophyton tonsurans CBS 112818]
 gi|326480982|gb|EGE04992.1| ubiquitin [Trichophyton equinum CBS 127.97]
          Length = 229

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|353238378|emb|CCA70326.1| related to UBI4-Ubiquitin [Piriformospora indica DSM 11827]
          Length = 222

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 80  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 131

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 132 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKI 175

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 176 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 207



 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 42/151 (27%)

Query: 3   TVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKR 61
           T+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N+++
Sbjct: 5   TITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQK 56

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 57  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 100

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TL+ Y ++
Sbjct: 101 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 131


>gi|281211832|gb|EFA85994.1| hypothetical protein PPL_01227 [Polysphondylium pallidum PN500]
          Length = 385

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 166 KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 217

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 218 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKI 261

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G +L+D +TL+ Y ++ +
Sbjct: 262 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 295



 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 45/157 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKI 106

Query: 116 ---------------LFCTGMKLKDCKTLACYGVKDD 137
                          L   G +L+D +TL+ Y ++ +
Sbjct: 107 QGYRARMVFHPINQRLIFAGKQLEDGRTLSDYNIQKE 143



 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 318 KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 369

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 370 KESTLHLVL 378


>gi|75858833|gb|ABA28993.1| polyubiquitin [Symbiodinium sp. C3]
          Length = 176

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 30/146 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDSIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K KI          + K  +
Sbjct: 63  KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKTKI----------QDKEGI 112

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVK 135
               + L   G +L+D +TL+ Y ++
Sbjct: 113 PPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|239799385|dbj|BAH70616.1| ACYPI007765 [Acyrthosiphon pisum]
          Length = 153

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDSIENVKAKI 106

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|358370809|dbj|GAA87419.1| polyubiquitin [Aspergillus kawachii IFO 4308]
          Length = 305

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKNKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVESSDTIDNVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 291 KESTLHLVL 299


>gi|4589760|dbj|BAA76889.1| ubiquitin [Trichophyton mentagrophytes]
 gi|6539532|dbj|BAA88168.1| ubiquitin [Arthroderma otae]
          Length = 153

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|443900281|dbj|GAC77607.1| ubiquitin and ubiquitin-like proteins [Pseudozyma antarctica T-34]
          Length = 228

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVL----------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVKDD 137
                     + L   G +L+D +TL+ Y ++ +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140


>gi|164510092|emb|CAJ32650.1| ubiquitin [Mytilus edulis]
          Length = 228

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 30/146 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +G  L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQLEDGSTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K KI          + K  +
Sbjct: 63  KESTLHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI----------QDKEGI 112

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVK 135
               + L   G +L+D  TL+ Y ++
Sbjct: 113 PPDQQSLIFAGKQLEDGSTLSDYNIQ 138



 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +G  L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLMFAGKQLEDGSTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|119192382|ref|XP_001246797.1| polyubiquitin [Coccidioides immitis RS]
 gi|145258352|ref|XP_001402015.1| ubiquitin [Aspergillus niger CBS 513.88]
 gi|258573789|ref|XP_002541076.1| ubiquitin [Uncinocarpus reesii 1704]
 gi|296808323|ref|XP_002844500.1| polyubiquitin [Arthroderma otae CBS 113480]
 gi|303312875|ref|XP_003066449.1| polyubiquitin, putative [Coccidioides posadasii C735 delta SOWgp]
 gi|134074621|emb|CAK44654.1| unnamed protein product [Aspergillus niger]
 gi|237901342|gb|EEP75743.1| ubiquitin [Uncinocarpus reesii 1704]
 gi|238843983|gb|EEQ33645.1| polyubiquitin [Arthroderma otae CBS 113480]
 gi|240106111|gb|EER24304.1| polyubiquitin, putative [Coccidioides posadasii C735 delta SOWgp]
 gi|350632449|gb|EHA20817.1| hypothetical protein ASPNIDRAFT_214265 [Aspergillus niger ATCC
           1015]
 gi|392863964|gb|EJB10724.1| polyubiquitin [Coccidioides immitis RS]
          Length = 305

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|392569339|gb|EIW62512.1| ubiquitin-domain-containing protein [Trametes versicolor FP-101664
           SS1]
          Length = 769

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 44/164 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 134 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 186

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 187 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNSKAK 228

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDDRGVACFISD 146
                        L   G +L+D +TL+ Y ++ +  +    SD
Sbjct: 229 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVWSD 272



 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 9/92 (9%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           KT+ L  + S+TI+N+K M+H+KEG + + Q L FAG +L + R + DY        N++
Sbjct: 391 KTIALEADSSDTIENVKAMIHDKEGVAPNQQRLIFAGKQLDSRRTVSDY--------NMR 442

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVK 92
           + ST+ L+F  +  + ISVK  S   + L+VK
Sbjct: 443 KGSTVFLIFRVLDGMQISVKTLSGKTITLEVK 474



 Score = 52.8 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 7/71 (9%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KTVTL  E  +T++N+K  +H+KEG   D+Q L FAG +L++GR        L+  ++  
Sbjct: 686 KTVTLEAEPFDTVENVKAKIHDKEGCPPDLQRLIFAGKQLVDGR-------TLSDYSIPN 738

Query: 62  ESTMQLLFCAI 72
            ST+ L++ +I
Sbjct: 739 NSTLHLVYRSI 749



 Score = 52.0 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 52/160 (32%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTS-------EDIQDLFFAGDRLMNGRLIDYEDMAL 54
           KT+TL VE S+TI N+K  + +KEGT         D Q L FAG +L +GR        L
Sbjct: 56  KTITLEVESSDTIDNVKAKIQDKEGTDIPSASLPPDQQRLIFAGKQLEDGR-------TL 108

Query: 55  ASPNVKRESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIR 114
           +  ++++EST+ L                       ++IFVK LT + + L+V+   TI 
Sbjct: 109 SDYSIQKESTLHL---------------------GGMQIFVKTLTGKTITLEVESSDTID 147

Query: 115 D-----------------LFCTGMKLKDCKTLACYGVKDD 137
           +                 L   G +L+D +TL+ Y ++ +
Sbjct: 148 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 187



 Score = 45.4 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 30/117 (25%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL V+  +TI ++K  +  KEGT  D Q + FA D L   R L+DY        N++
Sbjct: 467 KTITLEVKPLDTIGSIKTKIQAKEGTPPDQQCVKFADDELEEDRTLLDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVK-MLTEEIVKLKVKVLLTIRDL 116
             ST+QL+                     + +IFVK  LT E   L+VK   TI+D+
Sbjct: 519 WNSTLQLVG--------------------RFQIFVKRALTRETTPLEVKSSDTIKDV 555



 Score = 43.1 bits (100), Expect = 0.035,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 17/102 (16%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           +T  L V+ S+TIK++K    +KEG +   Q L FAG  L +G         L+   +++
Sbjct: 540 ETTPLEVKSSDTIKDVKEKYQDKEGVAPAHQRLIFAGKLLQDG-------CVLSDCGIQK 592

Query: 62  EST---------MQLLFCAIKVLSISVKA-PSDDILKLKVKI 93
           EST         MQ+   +    +I++KA PSD I +++ KI
Sbjct: 593 ESTLHLVIRLPGMQIFVKSFTGKTITIKAKPSDTIGRVREKI 634


>gi|395536787|ref|XP_003770393.1| PREDICTED: polyubiquitin-C-like, partial [Sarcophilus harrisii]
          Length = 243

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 42/150 (28%)

Query: 4   VTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRE 62
           +TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N+++E
Sbjct: 66  ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKE 117

Query: 63  STMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------- 115
           ST+ L+                  L+  ++IFVK LT + + L+V+   TI +       
Sbjct: 118 STLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 161

Query: 116 ----------LFCTGMKLKDCKTLACYGVK 135
                     L   G +L+D +TL+ Y ++
Sbjct: 162 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 191



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 25/108 (23%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 140 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 191

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK 108
           +EST+ L+                  L+  ++IFVK LT + + L+V+
Sbjct: 192 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVE 223


>gi|388857763|emb|CCF48657.1| probable polyubiquitin [Ustilago hordei]
          Length = 228

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVL----------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 139 KESTLHLVL 147


>gi|145530712|ref|XP_001451128.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418772|emb|CAK83731.1| unnamed protein product [Paramecium tetraurelia]
          Length = 169

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 36/146 (24%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIDATRKGI 106

Query: 114 ----RDLFCTGMKLKDCKTLACYGVK 135
               + L   G +L+D +TL+ Y ++
Sbjct: 107 PPDQQRLIFAGKQLEDGRTLSDYNIQ 132


>gi|28436472|gb|AAO43303.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 325

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KE    D Q L FAG +L +GR        LA  N+++
Sbjct: 182 KTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 234

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 235 ESTLHLVLR----------------LRGGMQIFVKNLTGKTITLEVESSGTIDNVKAKIQ 278

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 279 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 309



 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 40/146 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 31  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 83

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 84  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 127

Query: 114 ---------RDLFCTGMKLKDCKTLA 130
                    + L   G +L+D +TLA
Sbjct: 128 DKEGIPPDQQRLIFAGKQLEDGRTLA 153



 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 258 KTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 310

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 311 ESTLHLVL 318


>gi|312380774|gb|EFR26677.1| hypothetical protein AND_07080 [Anopheles darlingi]
          Length = 567

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 153 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 205

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 206 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 247

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 248 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 282



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 46/166 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           KT+TL+V  +ET+ ++K  + E+EG   D Q + FAG +L NGR+I DY        N++
Sbjct: 11  KTITLDVVPTETVLDIKSKIEEREGIDPDQQRIIFAGKQLENGRIISDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD--- 115
             STM L                  +L+LK  ++IFV+MLT + + +  +   T+     
Sbjct: 63  HGSTMHL------------------VLRLKGGMQIFVRMLTGKTIAIDTEPEATVESVKK 104

Query: 116 --------------LFCTGMKLKDCKTLACYGVKDDRGVACFISDI 147
                         +   G +L+D +TL  Y +     +  F+  +
Sbjct: 105 QIDEREEIPPNQQRMIFAGKQLEDGRTLEEYSIIKATNMQIFVKTL 150


>gi|281205784|gb|EFA79973.1| ubiquitin [Polysphondylium pallidum PN500]
          Length = 306

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  +++FVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQVFVKTLTGKTITLEVEGSDTIENVKTKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  +++FVK LT + + L+V+   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQVFVKTLTGKTITLEVEGSDTIENVKTKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|392569336|gb|EIW62509.1| ubiquitin [Trametes versicolor FP-101664 SS1]
          Length = 397

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 69/116 (59%), Gaps = 25/116 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           KT+TL V+ S+TI+N+K M+H+KEG + + Q L FAG +L + R + DY        N++
Sbjct: 12  KTITLEVDSSDTIENVKAMIHDKEGVAPNQQRLIFAGKQLDSHRTVSDY--------NLR 63

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           + ST+ L+F   +VL               ++IFVK L+ + + L+VK L TIR++
Sbjct: 64  KGSTVFLMF---RVLD-------------GMQIFVKTLSGKTITLEVKPLDTIRNI 103



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 10/87 (11%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KTVTL  E  +T++N+K  + +K+G     Q L FAG +L++GR L DY        N++
Sbjct: 306 KTVTLEAESFDTVENVKAKIQDKDGNPPHKQCLIFAGKQLVDGRTLSDY--------NIQ 357

Query: 61  RESTMQLLFCAIKVLSISVKA-PSDDI 86
           +EST+ +++     +  SV   PS+ I
Sbjct: 358 KESTLHVVWRQFGGMQPSVGTLPSEPI 384



 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 46/157 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL V+  +TI+N+K  +  KEG   D Q + FA ++L + R L DY        N++
Sbjct: 88  KTITLEVKPLDTIRNIKAKIQAKEGNPPDQQRIKFAEEQLEDDRTLSDY--------NIQ 139

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
             ST+QL+                     + +IFVK +  E   L+V    TI+D     
Sbjct: 140 WNSTLQLVG--------------------RFQIFVKTVAGETTPLEVVSSDTIKDVKEKY 179

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDDRGV 140
                       L   G +L+D   L+ YG++ D  V
Sbjct: 180 RDKEGAVPAQQRLIFAGKELEDDCILSDYGIQKDSTV 216


>gi|357132045|ref|XP_003567643.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Brachypodium
           distachyon]
          Length = 218

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 40/153 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE  +TI ++K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESRDTIDSVKAKIQDKEGIPPDQQRLIFAGKQLDDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+ K++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRAKMQIFVKTLTGKTITLEVESSDTIDNVKAKIH 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVKDD 137
                    + L   G +L+D +TLA Y ++ +
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 140



 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  +H+KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 87  KTITLEVESSDTIDNVKAKIHDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 139

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 140 ESTLHLVL 147


>gi|16552475|dbj|BAB71316.1| unnamed protein product [Homo sapiens]
          Length = 388

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 42/147 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 209 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 260

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 261 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 304

Query: 116 ------------LFCTGMKLKDCKTLA 130
                       L   G +L+D +TL+
Sbjct: 305 QDKEGIPPDQQRLIFAGKQLEDGRTLS 331



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 40/174 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALAS---P 57
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY      S    
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEPSDTIE 70

Query: 58  NVKRE--------STMQLLFCAIKVL---------SISVKAPSDDILKLK--VKIFVKML 98
           NVK +           Q L  A K L         +I  ++    +L+L+  ++IFVK L
Sbjct: 71  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 130

Query: 99  TEEIVKLKVKVLLTIRD-----------------LFCTGMKLKDCKTLACYGVK 135
           T + + L+V+   TI +                 L   G +L+D +TL+ Y ++
Sbjct: 131 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 184



 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 9/60 (15%)

Query: 11  SETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQLLF 69
           S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N+++EST+ L+ 
Sbjct: 331 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKESTLHLVL 382


>gi|27734329|gb|AAM51193.1| polyubiquitin [Haynesina germanica]
          Length = 175

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 41/152 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE ++TI+N+K  + +KEG   + Q L FAG +L +GR L DY        N++
Sbjct: 4   KTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDY--------NIQ 55

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L      VL +   A         ++IFVK LT + + L V+   TI++     
Sbjct: 56  KESTLHL------VLRLRGGA---------MQIFVKTLTGKTITLDVEPNDTIQNVKAKI 100

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 101 QDKEGIPPEQQRLIFAGKQLEDGRTLSDYNIQ 132


>gi|118370592|ref|XP_001018497.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300264|gb|EAR98252.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 384

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           KTVTL++E S+TI+N+K  + +KEG   D Q L FAG +L +GR + DY        N++
Sbjct: 163 KTVTLDIEASDTIENIKAKIQDKEGIPPDQQRLIFAGKQLDDGRTVQDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + V L +    TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTVTLDLDPCDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L D +TL+ Y ++
Sbjct: 259 QDKERIPPDQQRLIFAGKQLDDSRTLSDYNIQ 290



 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TLN E S++I+++K  + +KEG   D Q L FAG +L +GR       +L+  N+++
Sbjct: 11  KTITLNTEVSDSIQDVKAKIQDKEGIPPDQQRLIFAGKQLDDGR-------SLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + V L ++   T+ +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTVTLDLEPCDTVENVKAKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L D +TL+ Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLDDSRTLSDYNIQ 138



 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 25/113 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KTVTL+++  +TI+N+K  + +KE    D Q L FAG +L + R L DY        N++
Sbjct: 239 KTVTLDLDPCDTIENVKAKIQDKERIPPDQQRLIFAGKQLDDSRTLSDY--------NIQ 290

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           REST+ L+                  L+  ++IFVK LT + + L V+   TI
Sbjct: 291 RESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVESSDTI 327



 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L F+G  L + R L DY        N++
Sbjct: 315 KTITLDVESSDTIDNVKAKIQDKEGIPPDQQRLIFSGKCLEDTRKLTDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|27734369|gb|AAM51213.1| polyubiquitin [Cercomonas sp. ATCC 50316]
          Length = 177

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 46/155 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+ +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 4   KTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 56

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK----VKIFVKMLTEEIVKLKVKVLLTI---- 113
           EST+ L                  +L+L+    ++IFVK LT + + L V+   TI    
Sbjct: 57  ESTLHL------------------VLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVK 98

Query: 114 -------------RDLFCTGMKLKDCKTLACYGVK 135
                        + L   G +L+D +TLA Y ++
Sbjct: 99  QKIQDKEGIPPDQQRLIFAGRQLEDGRTLADYNIQ 133


>gi|198424689|ref|XP_002119546.1| PREDICTED: similar to ubiquitin isoform 2 [Ciona intestinalis]
 gi|198424691|ref|XP_002119309.1| PREDICTED: similar to ubiquitin isoform 1 [Ciona intestinalis]
          Length = 229

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKI 106

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|27734387|gb|AAM51222.1| polyubiquitin [Euglypha rotunda]
          Length = 177

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 48/155 (30%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        NV 
Sbjct: 4   KTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NVT 55

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK----VKIFVKMLTEEIVKLKVKVLLTIRD- 115
           +E+T+ L                  +L+L+    ++IFVK LT + + L V+   TI + 
Sbjct: 56  KEATLHL------------------VLRLRGGSGMQIFVKTLTGKTITLDVEASDTIENV 97

Query: 116 ----------------LFCTGMKLKDCKTLACYGV 134
                           L   G +L+D +TL+ Y V
Sbjct: 98  KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNV 132


>gi|118370588|ref|XP_001018495.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300262|gb|EAR98250.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 854

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 637 KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 689

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L V+   TI +    
Sbjct: 690 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAK 731

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 732 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 766



 Score = 61.6 bits (148), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S++I+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 561 KTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 613

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L V+   TI +    
Sbjct: 614 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAK 655

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 656 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 690



 Score = 55.8 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 789 KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 841

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 842 ESTLHLVL 849


>gi|148905774|gb|ABR16051.1| unknown [Picea sitchensis]
 gi|148906367|gb|ABR16338.1| unknown [Picea sitchensis]
 gi|148906448|gb|ABR16377.1| unknown [Picea sitchensis]
          Length = 153

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLDVESSDTIDNIKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+      +SI VK            P D I ++K ++  K   E I  ++ +  
Sbjct: 64  ESTLHLVLRLRGGISIKVKTLTGKEVEIDIEPHDTIERIKQRVEEK---EGIPPIQQR-- 118

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
                L   G ++ D KT   Y ++
Sbjct: 119 -----LIYGGKQMNDDKTAREYNIE 138


>gi|323716602|gb|ADY05179.1| ubiquitin [Acipenser persicus]
          Length = 132

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 42/149 (28%)

Query: 5   TLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRES 63
           TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N+++ES
Sbjct: 1   TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKES 52

Query: 64  TMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD-------- 115
           T+ L+                  L+  ++IFVK LT + + L+V+   TI +        
Sbjct: 53  TLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK 96

Query: 116 ---------LFCTGMKLKDCKTLACYGVK 135
                    L   G +L+D +TL+ Y ++
Sbjct: 97  EGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 125



 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 9/67 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 74  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 125

Query: 61  RESTMQL 67
           +ESTM L
Sbjct: 126 KESTMHL 132


>gi|290979754|ref|XP_002672598.1| polyubiquitin [Naegleria gruberi]
 gi|284086176|gb|EFC39854.1| polyubiquitin [Naegleria gruberi]
          Length = 154

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 47/155 (30%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE ++TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK---VKIFVKMLTEEIVKLKVKVLLTIRD-- 115
           +EST+ L                  +L+L+   ++IFVK LT + + L+V+   TI +  
Sbjct: 63  KESTLHL------------------VLRLRGGGMQIFVKTLTGKTITLEVESNDTIENVK 104

Query: 116 ---------------LFCTGMKLKDCKTLACYGVK 135
                          L   G +L+D +TL+ Y ++
Sbjct: 105 SKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 139


>gi|18398638|ref|NP_566357.1| polyubiquitin 8 [Arabidopsis thaliana]
 gi|75101960|sp|Q39256.1|UBQ8_ARATH RecName: Full=Polyubiquitin 8; Contains: RecName:
           Full=Ubiquitin-related 1; Contains: RecName:
           Full=Ubiquitin-related 2; Contains: RecName:
           Full=Ubiquitin-related 3; Contains: RecName:
           Full=Ubiquitin-related 4; Contains: RecName:
           Full=Ubiquitin-related 5; Contains: RecName:
           Full=Ubiquitin-related 6; Contains: RecName:
           Full=Ubiquitin-related 7; Contains: RecName:
           Full=Ubiquitin-related 8; Flags: Precursor
 gi|6681339|gb|AAF23256.1|AC015985_14 polyubiquitin (ubq8) [Arabidopsis thaliana]
 gi|6682255|gb|AAF23307.1|AC016661_32 polyubiquitin [Arabidopsis thaliana]
 gi|870794|gb|AAA68879.1| polyubiquitin [Arabidopsis thaliana]
 gi|332641292|gb|AEE74813.1| polyubiquitin 8 [Arabidopsis thaliana]
          Length = 631

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 14/138 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S++I N+K  +  KEG   D Q L FAG +L +G       + LA  N+++
Sbjct: 13  KTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDG-------LTLADYNIQK 65

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK----VLLTIRDLF 117
           EST+ L+      + I V+  +   + L+VK      T + VK K++    +L   + L 
Sbjct: 66  ESTLHLVLRLRGGMQIFVQTLTGKTITLEVK---SSDTIDNVKAKIQDKEGILPRQQRLI 122

Query: 118 CTGMKLKDCKTLACYGVK 135
             G +L+D +TLA Y ++
Sbjct: 123 FAGKQLEDGRTLADYNIQ 140



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 80/153 (52%), Gaps = 22/153 (14%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL V+ S+TI N+K  + +KEG     Q L FAG +L +GR        LA  N+++
Sbjct: 89  KTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGR-------TLADYNIQK 141

Query: 62  ESTMQLL--FCA---IKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD- 115
           EST+ L+   C    I V + S K  + D L LKV+      T E VK K++    +R  
Sbjct: 142 ESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVE---SSDTIENVKAKIQDREGLRPD 198

Query: 116 ---LFCTGMKL--KDCKTLACYGVKDDRGVACF 143
              L   G +L  +D +TLA YG++ +R   C 
Sbjct: 199 HQRLIFHGEELFTEDNRTLADYGIR-NRSTLCL 230



 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 67/152 (44%), Gaps = 35/152 (23%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           K +TL V  S+TIK++K  + +K G+  D Q L F G +L +GR        L   N++ 
Sbjct: 403 KIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGR-------TLGDYNIRN 455

Query: 62  ESTMQLLF-------CAIKVLSISVKAP-----------SDDILKLKVKIFVKMLTEEIV 103
           EST+ L F         +K  S S + P           SD I  +KVKI          
Sbjct: 456 ESTLHLFFHIRHGMQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKI---------- 505

Query: 104 KLKVKVLLTIRDLFCTGMKLKDCKTLACYGVK 135
           + KV + L  + L   G  L   +TL  Y ++
Sbjct: 506 QHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQ 537



 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 46/161 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEG--TSEDIQDLFFAGDRLMNGRLIDYEDMALASPNV 59
           K + L VE  +TI+N+K MV +KEG     ++Q L F G  L +G         LA  ++
Sbjct: 329 KRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDG-------CTLADYSI 381

Query: 60  KRESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           ++EST+ L+                    L ++IFVK+   +I+ L+V    TI+     
Sbjct: 382 QKESTLHLV--------------------LGMQIFVKLFGGKIITLEVLSSDTIKSVKAK 421

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDDRGVACF 143
                        L   G +L+D +TL  Y ++++  +  F
Sbjct: 422 IQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRNESTLHLF 462



 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 42/149 (28%)

Query: 6   LNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKRESTM 65
           L VE S+TI N+K  + +KE    D+  L FAG  L  GR        LA  N+++ ST+
Sbjct: 257 LEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGR-------TLAHYNIQKGSTL 309

Query: 66  QLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD---------- 115
            L+                   +  ++IFVK LT + + L+V+   TI +          
Sbjct: 310 YLVTR----------------FRCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEG 353

Query: 116 ---------LFCTGMKLKDCKTLACYGVK 135
                    L   G +LKD  TLA Y ++
Sbjct: 354 IQPQPNLQRLIFLGKELKDGCTLADYSIQ 382



 Score = 38.9 bits (89), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI N+K  +  KEG   D Q L F G +L +G       + L   ++ +
Sbjct: 562 KTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDG-------VTLGDYDIHK 614

Query: 62  ESTMQLLF 69
           +ST+ L+ 
Sbjct: 615 KSTLYLVL 622


>gi|3789940|gb|AAC67551.1| tetra-ubiquitin [Saccharum hybrid cultivar H32-8560]
          Length = 305

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 14/138 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N++ 
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQX 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK----VLLTIRDLF 117
           ES   L+      + I VK  +   + L+V+      T + VK K++    +    + L 
Sbjct: 140 ESXXHLVLRXRGGMQIFVKTXTGKTITLEVE---SSDTXDNVKXKIQDKEGIPPDQQRLI 196

Query: 118 CTGMKLKDCKTLACYGVK 135
             G +L+D +TLA Y ++
Sbjct: 197 FAGKQLEDGRTLADYNIQ 214



 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+ I  +   + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDXIDXVXAKIQDKEGIPPDQQRLIFAGKQLEDGRTLXDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST  L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTXHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TLA Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 291

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 292 ESTLHLVL 299


>gi|301096555|ref|XP_002897374.1| ubiquitin family protein, putative [Phytophthora infestans T30-4]
 gi|262107065|gb|EEY65117.1| ubiquitin family protein, putative [Phytophthora infestans T30-4]
 gi|348684366|gb|EGZ24181.1| hypothetical protein PHYSODRAFT_353926 [Phytophthora sojae]
          Length = 305

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 30/146 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S++I N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K KI          + K  +
Sbjct: 63  KESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKI----------QDKEGI 112

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVK 135
               + L   G +L+D +TL+ Y ++
Sbjct: 113 PPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 30/146 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S++I N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K KI          + K  +
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKI----------QDKEGI 264

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVK 135
               + L   G +L+D +TL+ Y ++
Sbjct: 265 PPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|302393786|sp|P22589.2|UBIQP_PHYIN RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|3176|emb|CAA39250.1| ubiquitin [Phytophthora infestans]
 gi|348684114|gb|EGZ23929.1| hypothetical protein PHYSODRAFT_284823 [Phytophthora sojae]
          Length = 229

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 30/146 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S++I N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K KI          + K  +
Sbjct: 63  KESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKI----------QDKEGI 112

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVK 135
               + L   G +L+D +TL+ Y ++
Sbjct: 113 PPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S++I N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|240254322|ref|NP_176714.4| ubiquitin 13 [Arabidopsis thaliana]
 gi|332196241|gb|AEE34362.1| ubiquitin 13 [Arabidopsis thaliana]
          Length = 319

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 40/146 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLA 130
                    + L   G +L+D +TLA
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLA 133



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 23/112 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KE    D Q L FAG +L +GR        LA  N+++
Sbjct: 162 KTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 214

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 215 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSGTI 250



 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 7/75 (9%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRL------MNGRLIDYEDMA-L 54
           KT+TL VE S TI N+K  + +KEG   D Q L FAG +L        G     E +A L
Sbjct: 238 KTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGGPGGGGGHFQKAEALAFL 297

Query: 55  ASPNVKRESTMQLLF 69
           A  N+++EST+ L+ 
Sbjct: 298 ADYNIQKESTLHLVL 312


>gi|27734383|gb|AAM51220.1| polyubiquitin [Euglypha rotunda]
 gi|27734385|gb|AAM51221.1| polyubiquitin [Euglypha rotunda]
          Length = 177

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 48/155 (30%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        NV 
Sbjct: 4   KTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NVT 55

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK----VKIFVKMLTEEIVKLKVKVLLTIRD- 115
           +E+T+ L                  +L+L+    ++IFVK LT + + L V+   TI + 
Sbjct: 56  KEATLHL------------------VLRLRGGSGMQIFVKTLTGKTITLDVEASDTIENV 97

Query: 116 ----------------LFCTGMKLKDCKTLACYGV 134
                           L   G +L+D +TL+ Y V
Sbjct: 98  KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNV 132


>gi|27734371|gb|AAM51214.1| polyubiquitin [Cercomonas sp. ATCC 50316]
 gi|27734373|gb|AAM51215.1| polyubiquitin [Cercomonas sp. ATCC 50316]
          Length = 177

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 46/155 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+ +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 4   KTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 56

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK----VKIFVKMLTEEIVKLKVKVLLTI---- 113
           EST+ L                  +L+L+    ++IFVK LT + + L V+   TI    
Sbjct: 57  ESTLHL------------------VLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVK 98

Query: 114 -------------RDLFCTGMKLKDCKTLACYGVK 135
                        + L   G +L+D +TLA Y ++
Sbjct: 99  QKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 133


>gi|27734375|gb|AAM51216.1| polyubiquitin [Cercomonas sp. ATCC 50316]
          Length = 255

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 46/155 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+ +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 4   KTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 56

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK----VKIFVKMLTEEIVKLKVKVLLTI---- 113
           EST+ L                  +L+L+    ++IFVK LT + + L V+   TI    
Sbjct: 57  ESTLHL------------------VLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVK 98

Query: 114 -------------RDLFCTGMKLKDCKTLACYGVK 135
                        + L   G +L+D +TLA Y ++
Sbjct: 99  QKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 133



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 29/116 (25%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+ +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 160 KTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 212

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK----VKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L                  +L+L+    ++IFVK LT + + L V+   TI
Sbjct: 213 ESTLHL------------------VLRLRGGSGMQIFVKTLTGKTITLDVESSDTI 250


>gi|380016682|ref|XP_003692305.1| PREDICTED: uncharacterized protein LOC100871808 [Apis florea]
          Length = 377

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 25/116 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++
Sbjct: 63  KESTLHLVL----------------RLRGGMQIFVKTLTGKTITLEVEASDTIENV 102



 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 6/74 (8%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR------LIDYEDMALA 55
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR      L+        
Sbjct: 87  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRVLGDCPLVQAPQWGRV 146

Query: 56  SPNVKRESTMQLLF 69
              V ++ T+Q ++
Sbjct: 147 RERVLKDGTLQTVY 160


>gi|7439572|pir||T02358 ubiquitin homolog T8F5.13 - Arabidopsis thaliana
 gi|3335355|gb|AAC27157.1| Match to polyubiquitin DNA gb|L05401 from A. thaliana. Contains
           insertion of mitochondrial NADH dehydrogenase gb|X82618
           and gb|X98301. May be a pseudogene with an expressed
           insert. EST gb|AA586248 comes from this region
           [Arabidopsis thaliana]
          Length = 324

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 40/146 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLA 130
                    + L   G +L+D +TLA
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLA 133



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 23/112 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KE    D Q L FAG +L +GR        LA  N+++
Sbjct: 162 KTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 214

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 215 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSGTI 250



 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 12/80 (15%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRL-----------MNGRLIDYE 50
           KT+TL VE S TI N+K  + +KEG   D Q L FAG +L            +      E
Sbjct: 238 KTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGGPGGGGGSRASRHFQKAE 297

Query: 51  DMA-LASPNVKRESTMQLLF 69
            +A LA  N+++EST+ L+ 
Sbjct: 298 ALAFLADYNIQKESTLHLVL 317


>gi|195337251|ref|XP_002035242.1| GM14032 [Drosophila sechellia]
 gi|194128335|gb|EDW50378.1| GM14032 [Drosophila sechellia]
          Length = 915

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG S D Q L FAG +L +GR        L+  N+++
Sbjct: 771 KTITLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGR-------TLSDYNIQK 823

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 824 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 865

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 866 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 900



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTINLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 671

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 672 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 713

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 714 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 748


>gi|116783396|gb|ABK22925.1| unknown [Picea sitchensis]
          Length = 262

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT++L VE S+ I NLK  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTISLEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D + LA Y ++
Sbjct: 108 DKEGILPDQQSLIFAGKQLEDGRNLADYNIQ 138



 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 72/152 (47%), Gaps = 38/152 (25%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGILPDQQSLIFAGKQLEDGRNLADY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+      +    I V+  SD      + IFV  LT E + L V    TI D     
Sbjct: 139 KESTI------LGTSFIRVRLTSD------MLIFVITLTGEAITLVVATSDTIYDVKAKI 186

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D + LA Y ++
Sbjct: 187 QGKKGIPPFRQRLIFAGKQLEDRRNLAYYNIQ 218


>gi|428164090|gb|EKX33130.1| ubiquitin [Guillardia theta CCMP2712]
          Length = 153

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI  +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDMVKSKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138


>gi|32564339|ref|NP_741158.2| Protein UBQ-1, isoform c [Caenorhabditis elegans]
 gi|373219553|emb|CCD68780.1| Protein UBQ-1, isoform c [Caenorhabditis elegans]
          Length = 538

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 62.8 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK L  + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 42.4 bits (98), Expect = 0.061,   Method: Composition-based stats.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAG 38
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG
Sbjct: 467 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503


>gi|441630341|ref|XP_004089535.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
          Length = 590

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 68  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 120

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 121 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 162

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 163 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 197



 Score = 62.8 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 220 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 272

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 273 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 314

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 315 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 349



 Score = 62.8 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 372 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 424

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 425 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 466

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 467 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 501



 Score = 55.5 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 524 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 576

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 577 ESTLHLVL 584


>gi|145498417|ref|XP_001435196.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402326|emb|CAK67799.1| unnamed protein product [Paramecium tetraurelia]
          Length = 369

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 151 KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 202

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI       
Sbjct: 203 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKI 246

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 247 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 278



 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 25/113 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTI 99



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 303 KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 354

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 355 KESTLHLVL 363



 Score = 42.0 bits (97), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 22/136 (16%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPN--V 59
           KT+TL+VE S+TI  +K  + +KEG   D Q L FA     + ++I  +     S    +
Sbjct: 87  KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFA----EHSQIITIQRGINPSLGFKI 142

Query: 60  KRESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDLFCT 119
           KR +T+       K +++ V+ PSD I  +K KI          + K  +    + L   
Sbjct: 143 KRRNTL-----TGKTITLDVE-PSDTIDAVKAKI----------QDKEGIPPDQQRLIFA 186

Query: 120 GMKLKDCKTLACYGVK 135
           G +L+D +TL+ Y ++
Sbjct: 187 GKQLEDGRTLSDYNIQ 202


>gi|384493519|gb|EIE84010.1| polyubiquitin [Rhizopus delemar RA 99-880]
          Length = 305

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   +I +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDSIENVKQKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   +I +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDSIENVKQKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|384496533|gb|EIE87024.1| polyubiquitin [Rhizopus delemar RA 99-880]
          Length = 229

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   +I +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDSIENVKQKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|66811838|ref|XP_640098.1| hypothetical protein DDB_G0282369 [Dictyostelium discoideum AX4]
 gi|302595961|sp|P0CG79.1|UBIQG_DICDI RecName: Full=Polyubiquitin-G; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|167949|gb|AAA33268.1| ubiquitin [Dictyostelium discoideum]
 gi|60468034|gb|EAL66044.1| hypothetical protein DDB_G0282369 [Dictyostelium discoideum AX4]
          Length = 381

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKI 106

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKI 258

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|27734306|gb|AAM50044.1| polyubiquitin 7 [Cercomonas sp. ATCC 50316]
          Length = 177

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 46/155 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+ +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 4   KTITLDVESSDTIETVKQKIRDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 56

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK----VKIFVKMLTEEIVKLKVKVLLTI---- 113
           EST+ L                  +L+L+    ++IFVK LT + + L V+   TI    
Sbjct: 57  ESTLHL------------------VLRLRGGSAMQIFVKTLTGKTITLDVESSDTIETVK 98

Query: 114 -------------RDLFCTGMKLKDCKTLACYGVK 135
                        + L   G +L+D +TLA Y ++
Sbjct: 99  QKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 133


>gi|301094179|ref|XP_002997933.1| ubiquitin, putative [Phytophthora infestans T30-4]
 gi|262109719|gb|EEY67771.1| ubiquitin, putative [Phytophthora infestans T30-4]
          Length = 175

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 30/146 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S++I N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEPSDSIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K KI          + K  +
Sbjct: 63  KESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKI----------QDKEGI 112

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVK 135
               + L   G +L+D +TL+ Y ++
Sbjct: 113 PPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|119569495|gb|EAW49110.1| hCG1993742 [Homo sapiens]
          Length = 148

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 25/116 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENV 102


>gi|66802284|ref|XP_629924.1| hypothetical protein DDB_G0291928 [Dictyostelium discoideum AX4]
 gi|66825263|ref|XP_645986.1| hypothetical protein DDB_G0269458 [Dictyostelium discoideum AX4]
 gi|302595963|sp|P0CG80.1|UBIQI_DICDI RecName: Full=Polyubiquitin-I; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595964|sp|P0CG88.1|UBIQJ_DICDI RecName: Full=Polyubiquitin-J; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|60463302|gb|EAL61494.1| hypothetical protein DDB_G0291928 [Dictyostelium discoideum AX4]
 gi|60474142|gb|EAL72079.1| hypothetical protein DDB_G0269458 [Dictyostelium discoideum AX4]
          Length = 305

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKI 106

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKI 258

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|148908993|gb|ABR17600.1| unknown [Picea sitchensis]
          Length = 252

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT++L VE S+ I NLK  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTISLEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D + LA Y ++
Sbjct: 108 DKEGILPDQQSLIFAGKQLEDGRNLADYNIQ 138



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 73/153 (47%), Gaps = 40/153 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGILPDQQSLIFAGKQLEDGRNLADY--------NIQ 138

Query: 61  REST-MQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           +EST +   F  +++ S        D+L     IFV  LT E + L V    TI D    
Sbjct: 139 KESTILGTSFIRVRLTS--------DML-----IFVITLTGEAITLVVATSDTIYDVKAK 185

Query: 116 -------------LFCTGMKLKDCKTLACYGVK 135
                        L   G +L+D + LA Y ++
Sbjct: 186 IQGKKGIPPFRQRLIFAGKQLEDRRNLAYYNIQ 218


>gi|428175943|gb|EKX44830.1| ubiquitin [Guillardia theta CCMP2712]
          Length = 229

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI  +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDMVKSKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138



 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI  +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 163 KTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 215

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 216 ESTLHLVL 223


>gi|167945|gb|AAA33266.1| ubiquitin [Dictyostelium discoideum]
          Length = 229

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKI 182

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 42/151 (27%)

Query: 3   TVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKR 61
           T+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR L DY        N+++
Sbjct: 12  TITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTIR 114
           EST+ L+                  L+  ++IFVK LT + + L+V+       V   I+
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQ 107

Query: 115 D----------LFCTGMKLKDCKTLACYGVK 135
           D          L   G +L+D +TL+ Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|66807485|ref|XP_637465.1| hypothetical protein DDB_G0286907 [Dictyostelium discoideum AX4]
 gi|302595959|sp|P0CG77.1|UBIQD_DICDI RecName: Full=Polyubiquitin-D; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|167943|gb|AAA33265.1| ubiquitin [Dictyostelium discoideum]
 gi|167953|gb|AAA33270.1| ubiquitin [Dictyostelium discoideum]
 gi|60465881|gb|EAL63951.1| hypothetical protein DDB_G0286907 [Dictyostelium discoideum AX4]
          Length = 229

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKI 106

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|66814762|ref|XP_641560.1| hypothetical protein DDB_G0279721 [Dictyostelium discoideum AX4]
 gi|302595962|sp|P0CG81.1|UBIQH_DICDI RecName: Full=Polyubiquitin-H; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-like
 gi|60469646|gb|EAL67635.1| hypothetical protein DDB_G0279721 [Dictyostelium discoideum AX4]
          Length = 381

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKI 106

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKI 258

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLEVECSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 367 KESTLHLVL 375


>gi|66812158|ref|XP_640258.1| hypothetical protein DDB_G0282295 [Dictyostelium discoideum AX4]
 gi|302595958|sp|P0CG76.1|UBIQA_DICDI RecName: Full=Polyubiquitin-A; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related 1; Flags:
           Precursor
 gi|167937|gb|AAA33262.1| ubiquitin [Dictyostelium discoideum]
 gi|167951|gb|AAA33269.1| ubiquitin [Dictyostelium discoideum]
 gi|60468260|gb|EAL66269.1| hypothetical protein DDB_G0282295 [Dictyostelium discoideum AX4]
          Length = 381

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKI 106

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 291 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKI 334

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 335 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 366



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKI 258

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|167935|gb|AAA33261.1| ubiquitin, partial [Dictyostelium discoideum]
          Length = 381

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKI 106

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKI 258

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 291 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKI 334

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +TL  Y ++
Sbjct: 335 QDKEGIPPDQQRLIFAGKQLEDGRTLFDYNIQ 366


>gi|413949281|gb|AFW81930.1| hypothetical protein ZEAMMB73_693456 [Zea mays]
          Length = 153

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI N+K  + +KEG S D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLDVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ +  + 
Sbjct: 64  ESTLPLVLRLKGGTMIKVKTLTRKEIEINIEPNDTIDRIK----------EHVEEREGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQLADDKTAKDYNIE 138


>gi|218198733|gb|EEC81160.1| hypothetical protein OsI_24083 [Oryza sativa Indica Group]
 gi|222636075|gb|EEE66207.1| hypothetical protein OsJ_22339 [Oryza sativa Japonica Group]
          Length = 240

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 64  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY--------NIQ 115

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L V+       V   I
Sbjct: 116 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLAVESSDKIDNVKAKI 159

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L     +L+D +TLA Y ++
Sbjct: 160 QDKEGIPPDQQRLIFADKQLEDGRTLADYNIQ 191


>gi|15284030|dbj|BAB63443.1| ubiquitin 2 [Physarum polycephalum]
 gi|19909902|dbj|BAB87824.1| polyubiquitin [Physarum polycephalum]
          Length = 229

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+++K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIESVKTKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+++K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|225711930|gb|ACO11811.1| Ubiquitin [Lepeophtheirus salmonis]
          Length = 229

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +E T+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KEPTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+  +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEGGRTLSDYNIQ 138



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|324522667|gb|ADY48104.1| Polyubiquitin-A [Ascaris suum]
          Length = 194

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 66/118 (55%), Gaps = 29/118 (24%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 19  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 70

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI ++
Sbjct: 71  KESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 110



 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/39 (53%), Positives = 27/39 (69%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDR 40
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG R
Sbjct: 95  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKR 133


>gi|310693627|gb|ADP05114.1| polyubiquitin 10 [Aponogeton madagascariensis]
          Length = 221

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 70/145 (48%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 5   KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 57

Query: 62  ESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+      + I VK             SD I  +K KI          + K  + 
Sbjct: 58  ESTLHLVLRLRGGMQIFVKTLTGETTTLEVESSDTIDNVKAKI----------QDKEGIP 107

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L+D +TLA Y ++
Sbjct: 108 PDQQRLIFAGKQLEDGRTLADYNIQ 132



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 157 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 209

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 210 ESTLHLVL 217


>gi|299470074|emb|CBN79251.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 380

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 162 KTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 213

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI       
Sbjct: 214 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKI 257

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 258 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 289



 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 314 KTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 365

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 366 KESTLHLVL 374



 Score = 52.4 bits (124), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 29/138 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI  +K  + +KEG   D Q L FAG +L +GR L DY           
Sbjct: 11  KTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY----------- 59

Query: 61  RESTMQLLFCAI---KVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDLF 117
               +Q +F      K +++ V+ PSD I  +K KI          + K  +    + L 
Sbjct: 60  ---NIQKIFVKTLTGKTITLDVE-PSDTIDGVKQKI----------QDKEGIPPDQQRLI 105

Query: 118 CTGMKLKDCKTLACYGVK 135
             G +L+D +TL+ Y ++
Sbjct: 106 FAGKQLEDGRTLSDYNIQ 123


>gi|353237461|emb|CCA69433.1| related to UBI4-Ubiquitin [Piriformospora indica DSM 11827]
          Length = 195

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 52/178 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  REST----------MQLLFCAIKVLSISVKAPSDDIL----------------KLKVKIF 94
           +EST          MQ+    +   +I+++  S D +                + +++IF
Sbjct: 63  KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRMQIF 122

Query: 95  VKMLTEEIVKLKVKVLLTI-----------------RDLFCTGMKLKDCKTLACYGVK 135
           VK LT + + L+V+   TI                 + L   G +L+D +TL+ Y ++
Sbjct: 123 VKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 180


>gi|15284034|dbj|BAB63445.1| ubiquitin 4 [Physarum polycephalum]
 gi|19909906|dbj|BAB87826.1| polyubiquitin [Physarum polycephalum]
          Length = 305

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+++K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIESVKTKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+++K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIESVKTKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|15284032|dbj|BAB63444.1| ubiquitin 3 [Physarum polycephalum]
 gi|19909904|dbj|BAB87825.1| polyubiquitin [Physarum polycephalum]
          Length = 305

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+++K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIESVKTKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+++K  + +KEG   D Q L FAG +L +GR L DY        N+ 
Sbjct: 11  KTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIH 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIESVKTKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|393218664|gb|EJD04152.1| polyubiquitin [Fomitiporia mediterranea MF3/22]
          Length = 321

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDTVKNKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDTVKNKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|297606280|ref|NP_001058221.2| Os06g0650100 [Oryza sativa Japonica Group]
 gi|255677281|dbj|BAF20135.2| Os06g0650100, partial [Oryza sativa Japonica Group]
          Length = 177

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 35  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 87

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 88  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIK----------ERVEEKEGIP 137

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 138 PVQQRLIYAGKQLADDKTAKDYNIE 162


>gi|297823361|ref|XP_002879563.1| hypothetical protein ARALYDRAFT_482524 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297325402|gb|EFH55822.1| hypothetical protein ARALYDRAFT_482524 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 152

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIK----------ERVEEKEGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQLADDKTAKDYAIE 138


>gi|164510220|emb|CAJ41450.1| ubiquitin [Alvinella caudata]
          Length = 152

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLGDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+             P    L+  ++IFVK LT + + L+V+    I +     
Sbjct: 63  KESTLHLV-------------PR---LRGGMQIFVKTLTGKTITLEVEASDNIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +TL  Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLGDYNIQ 138


>gi|444434925|dbj|BAM77037.1| ubiquitin C [Homo sapiens]
          Length = 685

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 291

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V++  TI +    
Sbjct: 292 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVELSDTIENVKAK 333

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 334 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 368



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 391 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 443

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 444 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 485

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 486 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 520



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 543 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 595

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 596 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 637

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 638 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 672



 Score = 56.2 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q   FAG +L +GR        L+  ++++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGR-------TLSDYSIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292


>gi|357494497|ref|XP_003617537.1| Bi-ubiquitin [Medicago truncatula]
 gi|355518872|gb|AET00496.1| Bi-ubiquitin [Medicago truncatula]
 gi|388497058|gb|AFK36595.1| unknown [Medicago truncatula]
          Length = 153

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIK----------ERVEEKEGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQLADDKTAKEYNIE 138


>gi|346466265|gb|AEO32977.1| hypothetical protein [Amblyomma maculatum]
          Length = 168

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 26  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 78

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 79  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIK----------ERVEEKEGIP 128

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 129 PVQQRLIYAGKQLADDKTAKEYNIE 153


>gi|388508634|gb|AFK42383.1| unknown [Medicago truncatula]
          Length = 153

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K ++  K   E I  ++ +V+
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEK---EGIPPVQQRVI 120

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
                    G +L D KT   Y ++
Sbjct: 121 -------YAGKQLADDKTAKEYNIE 138


>gi|298710587|emb|CBJ32017.1| similar to ubiquitin [Ectocarpus siliculosus]
          Length = 609

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI       
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKI 258

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290



 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 315 KTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI       
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKI 410

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442



 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 467 KTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 518

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI       
Sbjct: 519 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKI 562

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594


>gi|356525758|ref|XP_003531490.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
 gi|356556999|ref|XP_003546806.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
 gi|255627501|gb|ACU14095.1| unknown [Glycine max]
          Length = 154

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIK----------ERVEEKEGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQLADDKTAKEYNIE 138


>gi|182407852|gb|ACB87917.1| polyubiquitin 2 [Malus x domestica]
          Length = 177

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 40/145 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 56  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 108

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 109 ESTLHLVLR----------------LRRGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 152

Query: 114 ---------RDLFCTGMKLKDCKTL 129
                    + L   G +L+D +TL
Sbjct: 153 DKDGIPPDQQTLIFAGKQLEDGRTL 177



 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 50/149 (33%)

Query: 23  EKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKRESTMQLLFCAIKVLSISVKAP 82
           +KEG   D Q L FAG +L +GR        LA  N+++EST+ L+              
Sbjct: 1   DKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQKESTLHLVLR------------ 41

Query: 83  SDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-----------------RDLFCTGMKLKD 125
               L+  ++IFVK LT + + L+V+   TI                 + L   G +L+D
Sbjct: 42  ----LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 97

Query: 126 CKTLACYGVKDD----------RGVACFI 144
            +TLA Y ++ +          RG+  F+
Sbjct: 98  GRTLADYNIQKESTLHLVLRLRRGMQIFV 126


>gi|242093754|ref|XP_002437367.1| hypothetical protein SORBIDRAFT_10g025670 [Sorghum bicolor]
 gi|357123249|ref|XP_003563324.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Brachypodium
           distachyon]
 gi|302393766|sp|P0C031.2|RUB2_ORYSJ RecName: Full=Ubiquitin-NEDD8-like protein RUB2; Contains: RecName:
           Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
           protein RUB2; AltName: Full=OsRUB2; AltName:
           Full=Ubiquitin-related protein 2; Flags: Precursor
 gi|51534981|dbj|BAD38105.1| polyubiquitin 2 [Oryza sativa Japonica Group]
 gi|215692861|dbj|BAG88281.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218186299|gb|EEC68726.1| hypothetical protein OsI_37226 [Oryza sativa Indica Group]
 gi|218198663|gb|EEC81090.1| hypothetical protein OsI_23921 [Oryza sativa Indica Group]
 gi|241915590|gb|EER88734.1| hypothetical protein SORBIDRAFT_10g025670 [Sorghum bicolor]
          Length = 153

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIK----------ERVEEKEGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQLADDKTAKDYNIE 138


>gi|10719701|gb|AAG22093.1| ubiquitin [Scyliorhinus torazame]
          Length = 173

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 30/146 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+T  VE S+TI+N+K  +  KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 35  KTITXEVEPSDTIENVKAKIQXKEGIPPDQQRLIFAGKQLXDGRTLSDY--------NIQ 86

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K KI          + K  +
Sbjct: 87  KESTLHLVLRLRGGMQIFVKTLTGKTITXEVEPSDTIENVKAKI----------QXKEGI 136

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVK 135
               + L   G +L++ +TL+ Y ++
Sbjct: 137 PPDQQRLIFAGKQLEEXRTLSDYNIQ 162


>gi|290760636|gb|ADD59903.1| ubiquitin [Hemiscyllium ocellatum]
          Length = 102

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/107 (40%), Positives = 56/107 (52%), Gaps = 20/107 (18%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 2   KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 53

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVK 96
            ESTM L+      + I VK            PSD I  +K KI  K
Sbjct: 54  XESTMHLVLRLRGGMQIFVKTLTGKTITLXVEPSDTIENVKAKIQXK 100


>gi|18403909|ref|NP_565812.1| NEDD8-like protein RUB2 [Arabidopsis thaliana]
 gi|302393809|sp|Q8RUC6.3|RUB2_ARATH RecName: Full=Ubiquitin-NEDD8-like protein RUB2; Contains: RecName:
           Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
           protein RUB2; AltName: Full=Ubiquitin-related protein 2;
           Short=AtRUB2; Flags: Precursor
 gi|18650605|gb|AAL75902.1| At1g31340/T19E23_4 [Arabidopsis thaliana]
 gi|20147417|gb|AAM10418.1| At1g31340/T19E23_4 [Arabidopsis thaliana]
 gi|20197530|gb|AAM15116.1| ubiquitin-like UBQ7/AtRUB2, putative [Arabidopsis thaliana]
 gi|26452375|dbj|BAC43273.1| ubiquitin-like protein [Arabidopsis thaliana]
 gi|330254040|gb|AEC09134.1| NEDD8-like protein RUB2 [Arabidopsis thaliana]
          Length = 154

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIK----------ERVEEKEGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQLADDKTAKDYAIE 138


>gi|397527146|ref|XP_003833462.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-like [Pan paniscus]
          Length = 153

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNG-RLIDYEDMALASPNVK 60
           K +TL VE S TI+N+K  + +KEG   D Q L FAG +L +G  L DY        N++
Sbjct: 11  KIITLEVEPSATIENVKAKIQDKEGNPHDQQKLIFAGKQLEDGCSLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G KL+D +TL+ Y ++ +
Sbjct: 107 QDEEGIPPDQQRLIFAGKKLEDGRTLSDYSIQKE 140



 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + ++EG   D Q L FAG +L +GR L DY        +++
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDEEGIPPDQQRLIFAGKKLEDGRTLSDY--------SIQ 138

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 139 KESTLHLVL 147


>gi|115479211|ref|NP_001063199.1| Os09g0420800 [Oryza sativa Japonica Group]
 gi|242044708|ref|XP_002460225.1| hypothetical protein SORBIDRAFT_02g024880 [Sorghum bicolor]
 gi|357158453|ref|XP_003578133.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Brachypodium
           distachyon]
 gi|302393765|sp|P0C030.2|RUB1_ORYSJ RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName:
           Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
           protein RUB1; AltName: Full=OsRUB1; AltName:
           Full=Ubiquitin-related protein 1; Flags: Precursor
 gi|50725971|dbj|BAD33498.1| polyubiquitin 2 [Oryza sativa Japonica Group]
 gi|50726105|dbj|BAD33626.1| polyubiquitin 2 [Oryza sativa Japonica Group]
 gi|113631432|dbj|BAF25113.1| Os09g0420800 [Oryza sativa Japonica Group]
 gi|125563747|gb|EAZ09127.1| hypothetical protein OsI_31396 [Oryza sativa Indica Group]
 gi|215704536|dbj|BAG94169.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|241923602|gb|EER96746.1| hypothetical protein SORBIDRAFT_02g024880 [Sorghum bicolor]
 gi|326513616|dbj|BAJ87827.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 153

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIK----------ERVEEKEGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQLADDKTAKDYNIE 138


>gi|358060688|dbj|GAA93627.1| hypothetical protein E5Q_00271 [Mixia osmundae IAM 14324]
          Length = 1022

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 46/156 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 269 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIR 320

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD--- 115
           R                    PS  +L+L+  ++IFVK LT + + L+V+   TI +   
Sbjct: 321 RS------------------LPSTLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 362

Query: 116 --------------LFCTGMKLKDCKTLACYGVKDD 137
                         L   G +L+D +TL+ Y ++ +
Sbjct: 363 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 398


>gi|313237647|emb|CBY12791.1| unnamed protein product [Oikopleura dioica]
          Length = 112

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 25/116 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENV 102


>gi|224284138|gb|ACN39806.1| unknown [Picea sitchensis]
          Length = 252

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT++L VE S+ I NLK  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTISLEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVK 135
                    + L   G +L D + LA Y ++
Sbjct: 108 DKEGILPDQQSLIFAGKQLGDGRNLADYNIQ 138



 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 73/153 (47%), Gaps = 40/153 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGILPDQQSLIFAGKQLGDGRNLADY--------NIQ 138

Query: 61  REST-MQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           +EST +   F  +++ S        D+L     IFV  LT E + L V    TI D    
Sbjct: 139 KESTILGTSFIRVRLTS--------DML-----IFVITLTGEAITLVVATSDTIYDVKAK 185

Query: 116 -------------LFCTGMKLKDCKTLACYGVK 135
                        L   G +L+D + LA Y ++
Sbjct: 186 IQGKKGIPPFRQRLIFAGKQLEDRRNLAYYNIQ 218


>gi|226532866|ref|NP_001148606.1| LOC100282222 [Zea mays]
 gi|194700092|gb|ACF84130.1| unknown [Zea mays]
 gi|195619630|gb|ACG31645.1| polyubiquitin 2 [Zea mays]
 gi|195620202|gb|ACG31931.1| polyubiquitin 2 [Zea mays]
 gi|195620238|gb|ACG31949.1| polyubiquitin 2 [Zea mays]
 gi|195620732|gb|ACG32196.1| polyubiquitin 2 [Zea mays]
 gi|195620942|gb|ACG32301.1| polyubiquitin 2 [Zea mays]
 gi|195628320|gb|ACG35990.1| polyubiquitin 2 [Zea mays]
 gi|414885492|tpg|DAA61506.1| TPA: polyubiquitin 2 isoform 1 [Zea mays]
 gi|414885493|tpg|DAA61507.1| TPA: polyubiquitin 2 isoform 2 [Zea mays]
          Length = 153

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+T+ N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDSIDRIK----------ERVEEKEGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQLADDKTAKDYNIE 138


>gi|222635996|gb|EEE66128.1| hypothetical protein OsJ_22175 [Oryza sativa Japonica Group]
          Length = 208

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIK----------ERVEEKEGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQLADDKTAKDYNIE 138


>gi|341879718|gb|EGT35653.1| hypothetical protein CAEBREN_32771 [Caenorhabditis brenneri]
          Length = 970

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 67  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 119

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 120 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAK 161

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 162 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 196



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 219 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 271

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 272 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAK 313

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 314 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 348



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 371 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 423

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 424 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAK 465

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 466 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 500



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 523 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 575

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 576 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAK 617

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 618 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 652



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 675 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 727

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 728 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAK 769

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 770 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 804



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 827 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 879

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 880 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAK 921

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 922 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 956


>gi|379771652|gb|AFD18177.1| ubiquitin C, partial [Mylabris cichorii]
          Length = 204

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 25/116 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 71  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 122

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++
Sbjct: 123 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENV 162



 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 42/146 (28%)

Query: 8   VEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQ 66
           VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N+++EST+ 
Sbjct: 1   VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKESTLH 52

Query: 67  LLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----------- 115
           L+                  L+  ++IFVK LT + + L+V+   TI +           
Sbjct: 53  LVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 96

Query: 116 ------LFCTGMKLKDCKTLACYGVK 135
                 L   G +L+D +TL+ Y ++
Sbjct: 97  PPDQQRLIFAGKQLEDGRTLSDYNIQ 122



 Score = 35.4 bits (80), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFA 37
           KT+TL VE S+TI+N++  + +KEG   D Q L   
Sbjct: 147 KTITLEVEPSDTIENVEAKIQDKEGIPPDQQRLILP 182


>gi|145498050|ref|XP_001435013.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402142|emb|CAK67616.1| unnamed protein product [Paramecium tetraurelia]
          Length = 153

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 30/146 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K KI          + K  +
Sbjct: 63  KESTLHLVLRLRGGMQIFVKTLTGKNITLDVEPSDTIDAVKAKI----------QDKEGI 112

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVK 135
               + L   G +L+D +TL+ Y ++
Sbjct: 113 PPDQQRLIFAGKQLEDGRTLSDYNIQ 138


>gi|361584485|gb|AEW12065.1| polyubiquitin, partial [Drosophila melanogaster]
 gi|361584487|gb|AEW12066.1| polyubiquitin, partial [Drosophila melanogaster]
 gi|361584489|gb|AEW12067.1| polyubiquitin, partial [Drosophila melanogaster]
 gi|361584501|gb|AEW12073.1| polyubiquitin, partial [Drosophila melanogaster]
          Length = 231

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 30/148 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KE    + Q L FAG  L NGR L DY        N++
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFAGKHLENGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K +I  K   E I   + + 
Sbjct: 139 KESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDK---EGIPPDQQR- 194

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVKDD 137
                 L   G +L+D +TL+ Y ++ +
Sbjct: 195 ------LIFAGKQLEDGRTLSDYNIQKE 216



 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  +H+KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223



 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KE    + Q L F G  L NGR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTIYLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G  L++ +TL+ Y ++ +
Sbjct: 107 QDKEENPPEHQRLIFAGKHLENGRTLSDYNIQKE 140


>gi|297846540|ref|XP_002891151.1| hypothetical protein ARALYDRAFT_473638 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336993|gb|EFH67410.1| hypothetical protein ARALYDRAFT_473638 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 156

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIK----------ERVEEKEGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQLADDKTAKDYAIE 138


>gi|302393764|sp|P0C073.2|RUB1_DESAN RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName:
           Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
           protein RUB1; AltName: Full=DaRUB1; AltName:
           Full=Ubiquitin-related protein 1; Flags: Precursor
 gi|20562909|gb|AAM22748.1| polyubiquitin 2 [Deschampsia antarctica]
          Length = 153

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVK----------ERVEEKEGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQLADDKTAKDYNIE 138


>gi|27734379|gb|AAM51218.1| polyubiquitin [Cercomonas sp. ATCC 50316]
          Length = 177

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 46/155 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+ E S+TI+ +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 4   KTITLDAESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 56

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK----VKIFVKMLTEEIVKLKVKVLLTI---- 113
           EST+ L                  +L+L+    ++IFVK LT + + L V+   TI    
Sbjct: 57  ESTLHL------------------VLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVK 98

Query: 114 -------------RDLFCTGMKLKDCKTLACYGVK 135
                        + L   G +L+D +TLA Y ++
Sbjct: 99  QKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 133



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 29/116 (25%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+ +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 82  KTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 134

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK----VKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L                  +L+L+    ++IFVK LT + + L V+   TI
Sbjct: 135 ESTLHL------------------VLRLRGGSGMQIFVKTLTGKTITLDVESSDTI 172


>gi|385881402|gb|AFI98422.1| polyubiquitin-B, partial [Antricola delacruzi]
          Length = 156

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 43/153 (28%)

Query: 2   KTVTLNVEK-SETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNV 59
           KT+TL VE  S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N+
Sbjct: 13  KTITLEVEPGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NI 64

Query: 60  KRESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           ++EST+ L+                  L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 65  QKESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 108

Query: 116 -------------LFCTGMKLKDCKTLACYGVK 135
                        L   G +L+D +TL+ Y ++
Sbjct: 109 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 141



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 90  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 141

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 142 KESTLHLVL 150


>gi|119624910|gb|EAX04505.1| ubiquitin B, isoform CRA_d [Homo sapiens]
          Length = 116

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 25/115 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIEN 101


>gi|225465030|ref|XP_002265864.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2 [Vitis vinifera]
 gi|297736166|emb|CBI24204.3| unnamed protein product [Vitis vinifera]
          Length = 155

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIK----------ERVEEKEGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQLGDDKTARDYNIE 138


>gi|449444274|ref|XP_004139900.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Cucumis sativus]
 gi|449532435|ref|XP_004173186.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Cucumis sativus]
          Length = 154

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIK----------ERVEEKEGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQLGDDKTAKDYNIE 138


>gi|444434919|dbj|BAM77034.1| ubiquitin C [Homo sapiens]
          Length = 533

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  V +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 239 KTITLEVEPSDTIENVKAKVQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 291

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 292 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 333

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 334 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 368



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 14/140 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI----RDLF 117
           EST+ L+      + I VK  +   + L+V+      T E VK KV+    I    + L 
Sbjct: 216 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVE---PSDTIENVKAKVQDKEGIPPDQQRLI 272

Query: 118 CTGMKLKDCKTLACYGVKDD 137
             G +L+D +TL+ Y ++ +
Sbjct: 273 FAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 59.3 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           K +TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 391 KAITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 443

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 444 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 485

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 486 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 520



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 520 ESTLHLVL 527


>gi|367029699|ref|XP_003664133.1| hypothetical protein MYCTH_2315548 [Myceliophthora thermophila ATCC
           42464]
 gi|347011403|gb|AEO58888.1| hypothetical protein MYCTH_2315548 [Myceliophthora thermophila ATCC
           42464]
          Length = 305

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE ++TI+ +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 139 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESADTIETVKNKI 182

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214



 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE +++I+ +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESADSIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESADTIETVKNKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 52.4 bits (124), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE ++TI+ +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 239 KTITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 290

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 291 KESTLHLVL 299


>gi|30692436|ref|NP_564379.2| NEDD8-like protein RUB1 [Arabidopsis thaliana]
 gi|302393813|sp|Q9SHE7.3|RUB1_ARATH RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName:
           Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
           protein RUB1; AltName: Full=Ubiquitin-related protein 1;
           Short=AtRUB1; Flags: Precursor
 gi|6692129|gb|AAF24594.1|AC007654_10 T19E23.13 [Arabidopsis thaliana]
 gi|28973676|gb|AAO64156.1| putative ubiquitin (AtRUB1) [Arabidopsis thaliana]
 gi|29824269|gb|AAP04095.1| putative ubiquitin (AtRUB1) [Arabidopsis thaliana]
 gi|110737109|dbj|BAF00506.1| putative ubiquitin [Arabidopsis thaliana]
 gi|312283039|dbj|BAJ34385.1| unnamed protein product [Thellungiella halophila]
 gi|332193223|gb|AEE31344.1| NEDD8-like protein RUB1 [Arabidopsis thaliana]
          Length = 156

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIK----------ERVEEKEGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQLADDKTAKDYNIE 138


>gi|297606344|ref|NP_001058338.2| Os06g0673500 [Oryza sativa Japonica Group]
 gi|52077254|dbj|BAD46297.1| pentameric polyubiquitin-like [Oryza sativa Japonica Group]
 gi|52077458|dbj|BAD46688.1| pentameric polyubiquitin-like [Oryza sativa Japonica Group]
 gi|255677314|dbj|BAF20252.2| Os06g0673500 [Oryza sativa Japonica Group]
          Length = 187

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTIR 114
           EST+ L+                  L+  ++IFVK LT + + L V+       V   I+
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLAVESSDKIDNVKAKIQ 107

Query: 115 D----------LFCTGMKLKDCKTLACYGVK 135
           D          L     +L+D +TLA Y ++
Sbjct: 108 DKEGIPPDQQRLIFADKQLEDGRTLADYNIQ 138


>gi|336111806|gb|AEI16563.1| poly ubiquitin [Chelon labrosus]
          Length = 107

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 25/115 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 10  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 61

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +
Sbjct: 62  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIEN 100


>gi|118370598|ref|XP_001018500.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300267|gb|EAR98255.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 547

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 16/139 (11%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KTVTL+ E S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTVTLDFEASDTIENIKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLQDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK----VLLTIRDL 116
           +EST+ L+      + I VK  +   + L ++ F    T E VK K++    +    + L
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTVTLDLEPFD---TVENVKAKIQDKEGIPPDQQRL 195

Query: 117 FCTGMKLKDCKTLACYGVK 135
              G +L D +T+  Y ++
Sbjct: 196 IFAGKQLDDGRTVQDYNIQ 214



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           KTVTL+ E S+TI+N+K  + +KEG   D Q L FAG +L +GR + DY        N++
Sbjct: 315 KTVTLDFEASDTIENIKAKIQDKEGIPPDQQRLIFAGKQLDDGRTVQDY--------NIQ 366

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + V L ++   T+ +     
Sbjct: 367 KESTLHLVLR----------------LRGGMQIFVKTLTGKTVTLDLEPCDTVENVKAKI 410

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L D +T++ Y ++
Sbjct: 411 QDKEGIPPDQQRLIFAGKQLDDSRTISDYNIQ 442



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KTVTL+ E S+TI+N+K  + +KEG   D Q L FAG +L + R L DY        N++
Sbjct: 239 KTVTLDFEASDTIENIKAKIQDKEGIPPDQQRLIFAGKQLDDSRTLSDY--------NIQ 290

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + V L  +   TI +     
Sbjct: 291 KESTLHLVLR----------------LRGGMQIFVKTLTGKTVTLDFEASDTIENIKAKI 334

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L D +T+  Y ++
Sbjct: 335 QDKEGIPPDQQRLIFAGKQLDDGRTVQDYNIQ 366



 Score = 55.1 bits (131), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+ E S+TI+++K  + +KEG   D Q L FAG +L + R L DY        N++
Sbjct: 11  KTITLDFEVSDTIEDVKAKIQDKEGIPPDQQRLIFAGKQLDDSRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + V L  +   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTVTLDFEASDTIENIKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L D +TL  Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLDDGRTLQDYNIQ 138



 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL++E S+TI+N+K  + +KEG   D Q L F+G  L + R L DY        N++
Sbjct: 467 KTITLDLEASDTIENVKSKIQDKEGIPPDQQRLIFSGKCLEDFRTLSDY--------NIQ 518

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 519 KESTLHLVL 527


>gi|255544634|ref|XP_002513378.1| ubiquitin, putative [Ricinus communis]
 gi|223547286|gb|EEF48781.1| ubiquitin, putative [Ricinus communis]
          Length = 154

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIK----------ERVEEKEGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQLGDDKTARDYNIE 138


>gi|223646766|gb|ACN10141.1| Ubiquitin [Salmo salar]
 gi|223649344|gb|ACN11430.1| Ubiquitin [Salmo salar]
 gi|223672621|gb|ACN12492.1| Ubiquitin [Salmo salar]
          Length = 457

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444


>gi|384495224|gb|EIE85715.1| polyubiquitin [Rhizopus delemar RA 99-880]
          Length = 230

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVL----------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 139 KESTLHLVL 147


>gi|290986589|ref|XP_002676006.1| polyubiquitin [Naegleria gruberi]
 gi|284089606|gb|EFC43262.1| polyubiquitin [Naegleria gruberi]
          Length = 153

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 32/156 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           KT+TL VE +++I+N+K  + EKEG S D Q L F G +L +GR I DY        N++
Sbjct: 11  KTITLEVESNDSIENVKSKIQEKEGISPDQQRLIFGGKQLEDGRTINDY--------NIQ 62

Query: 61  RESTMQL---------LFCAI---KVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK 108
           ++ST+ L         LF      K ++I ++A +D I  +K KIF K   E I   + +
Sbjct: 63  KDSTLHLVLRLRGGMQLFVKTLTGKTITIEMEA-NDTIENMKQKIFDK---EGIPSDQQR 118

Query: 109 VLLTIRDLFCTGMKLKDCKTLACYGVKDDRGVACFI 144
                  L   G +L+D +T++ Y ++ D  V   +
Sbjct: 119 -------LIYAGKQLEDGRTISDYNLQKDSTVHLVL 147


>gi|225704224|gb|ACO07958.1| Ubiquitin [Oncorhynchus mykiss]
          Length = 104

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 25/116 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENV 102


>gi|408776165|gb|AFU90137.1| polyubiquitin, partial [Paeonia lactiflora]
          Length = 169

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 23/112 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 68  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 120

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 121 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 156



 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 40/142 (28%)

Query: 11  SETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKRESTMQLLFC 70
           S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++EST+ L+  
Sbjct: 1   SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQKESTLHLVLR 53

Query: 71  AIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI----------------- 113
                           L+  ++IFVK LT + + L+V+   TI                 
Sbjct: 54  ----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 97

Query: 114 RDLFCTGMKLKDCKTLACYGVK 135
           + L   G +L+D +TLA Y ++
Sbjct: 98  QRLIFAGKQLEDGRTLADYNIQ 119


>gi|27734341|gb|AAM51199.1| polyubiquitin [Lotharella amoeboformis]
          Length = 175

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 45/154 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+V+ S+TI  +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 4   KTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 56

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK---VKIFVKMLTEEIVKLKVKVLLTI----- 113
           EST+ L                  +L+L+   ++IFVK LT + + L V    TI     
Sbjct: 57  ESTLHL------------------VLRLRGGAMQIFVKTLTGKTITLDVDSSDTINTVKQ 98

Query: 114 ------------RDLFCTGMKLKDCKTLACYGVK 135
                       + L   G +L+D +TLA Y ++
Sbjct: 99  KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 132


>gi|67191208|ref|NP_066289.2| polyubiquitin-C [Homo sapiens]
          Length = 685

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 671

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 672 ESTLHLVL 679


>gi|340375318|ref|XP_003386183.1| PREDICTED: polyubiquitin-like [Amphimedon queenslandica]
          Length = 968

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 17/153 (11%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+T++N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 87  KTITLEVEPSDTMENIKAKIQDKEGIPPDQQRLIFAGRQLEDGR-------TLSDYNIQK 139

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI----RDLF 117
           EST+ L+      + I VK  +   + L+V+      T E VK K++    I    + L 
Sbjct: 140 ESTLHLVLRRRGGMQIFVKTLTGKTITLEVE---PSDTIENVKAKIQDKEGIPPDQQRLI 196

Query: 118 CTGMKLKDCKTLACYGVKDDRG---VACFISDI 147
             G  L+D +TL+ Y ++ +     V CF  D+
Sbjct: 197 FAGKILEDGRTLSDYNIQKESTLHLVLCFRHDM 229



 Score = 53.1 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 74/140 (52%), Gaps = 14/140 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           ++++L VE S+T++++K  + +KEG   D Q L F G +L NGR        L+  N++ 
Sbjct: 11  ESLSLEVEASDTVESVKEKIQDKEGIPPDQQRLIFVGKQLENGR-------TLSDYNIQN 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI----RDLF 117
           EST+ L+      + I VK  +   + L+V+      T E +K K++    I    + L 
Sbjct: 64  ESTLHLVLRLRGGMQIFVKTLTGKTITLEVE---PSDTMENIKAKIQDKEGIPPDQQRLI 120

Query: 118 CTGMKLKDCKTLACYGVKDD 137
             G +L+D +TL+ Y ++ +
Sbjct: 121 FAGRQLEDGRTLSDYNIQKE 140



 Score = 47.8 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 10/70 (14%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR--LIDYEDMALASPNV 59
           K + L VE S TI+N+K  + +KE    D Q L FAG +L NG   L+DY         +
Sbjct: 243 KIIFLQVEPSNTIENVKAKIQDKERIPPDQQKLIFAGKQLENGHYTLLDY--------GI 294

Query: 60  KRESTMQLLF 69
           +REST+ LL 
Sbjct: 295 QRESTLDLLL 304



 Score = 47.4 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 7/66 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           +T+TL VE S+TI+N+K  + +KEG   D Q L FAG  L+       +D  L+  N+K 
Sbjct: 638 RTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKVLV-------DDRTLSDYNIKT 690

Query: 62  ESTMQL 67
           + T+ L
Sbjct: 691 KDTIDL 696


>gi|426247174|ref|XP_004017361.1| PREDICTED: polyubiquitin-C-like isoform 1 [Ovis aries]
          Length = 462

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + EKEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKVKIQEKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444


>gi|1167510|dbj|BAA09096.1| TI-225 [Mus musculus]
          Length = 126

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 34/144 (23%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRDLFC 118
           +EST+ L                  +L+L+  ++IFVK LT + + L V+  +T + +  
Sbjct: 63  KESTLHL------------------VLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKV-- 102

Query: 119 TGMKLKDCKTLACYGVKDDRGVAC 142
              K +D +T      K     AC
Sbjct: 103 ---KQEDRRTFLTTVSKKSPPCAC 123


>gi|224066593|ref|XP_002302153.1| predicted protein [Populus trichocarpa]
 gi|224082516|ref|XP_002306725.1| predicted protein [Populus trichocarpa]
 gi|118485172|gb|ABK94447.1| unknown [Populus trichocarpa]
 gi|222843879|gb|EEE81426.1| predicted protein [Populus trichocarpa]
 gi|222856174|gb|EEE93721.1| predicted protein [Populus trichocarpa]
          Length = 154

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIK----------ERVEEKEGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQLGDDKTARDYNIE 138


>gi|62089150|dbj|BAD93019.1| ubiquitin C variant [Homo sapiens]
          Length = 1309

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 27  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 79

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 80  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 121

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 122 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 156



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 179 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 231

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 232 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 273

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 274 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 308



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 331 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 383

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 384 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 425

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 426 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 460



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 483 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 535

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 536 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 577

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 578 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 612



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 635 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 687

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 688 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 729

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 730 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 764



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 787 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 839

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 840 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 881

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 882 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 916



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2    KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
            KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 939  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 991

Query: 62   ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
            EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 992  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 1033

Query: 116  -------------LFCTGMKLKDCKTLACYGVKDD 137
                         L   G +L+D +TL+ Y ++ +
Sbjct: 1034 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 1068



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2    KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
            KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 1091 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 1143

Query: 62   ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
            EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 1144 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 1185

Query: 116  -------------LFCTGMKLKDCKTLACYGVKDD 137
                         L   G +L+D +TL+ Y ++ +
Sbjct: 1186 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 1220



 Score = 56.2 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2    KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
            KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L NGR        L+  N+++
Sbjct: 1243 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLENGR-------TLSDYNIQK 1295

Query: 62   ESTMQLLF 69
            EST+ L+ 
Sbjct: 1296 ESTLHLVL 1303


>gi|297735960|emb|CBI23934.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 23/113 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 110 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 162

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIR 114
           EST+ L+                  L+  ++IFVK LT + + L+  + L +R
Sbjct: 163 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLESTLHLVLR 199



 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 40/144 (27%)

Query: 9   EKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKRESTMQLL 68
           + S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++EST+ L+
Sbjct: 41  QSSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQKESTLHLV 93

Query: 69  FCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI--------------- 113
                             L+  ++IFVK LT + + L+V+   TI               
Sbjct: 94  LR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP 137

Query: 114 --RDLFCTGMKLKDCKTLACYGVK 135
             + L   G +L+D +TLA Y ++
Sbjct: 138 DQQRLIFAGKQLEDGRTLADYNIQ 161


>gi|195399337|ref|XP_002058277.1| GJ16000 [Drosophila virilis]
 gi|194150701|gb|EDW66385.1| GJ16000 [Drosophila virilis]
          Length = 457

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444


>gi|27734398|gb|AAM51223.1| polyubiquitin [Bigelowiella natans]
 gi|27734402|gb|AAM51224.1| polyubiquitin [Bigelowiella natans]
          Length = 306

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 45/154 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+V+ S+TI  +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 13  KTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 65

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK---VKIFVKMLTEEIVKLKVKVLLTI----- 113
           EST+ L                  +L+L+   ++IFVK LT + + L V    TI     
Sbjct: 66  ESTLHL------------------VLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQ 107

Query: 114 ------------RDLFCTGMKLKDCKTLACYGVK 135
                       + L   G +L+D +TLA Y ++
Sbjct: 108 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 141



 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 45/154 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+V+ S+TI  +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 167 KTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 219

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK---VKIFVKMLTEEIVKLKVKVLLTI----- 113
           EST+ L                  +L+L+   ++IFVK LT + + L V    TI     
Sbjct: 220 ESTLHL------------------VLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQ 261

Query: 114 ------------RDLFCTGMKLKDCKTLACYGVK 135
                       + L   G +L+D +TLA Y ++
Sbjct: 262 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 295


>gi|3158372|gb|AAC39466.1| polyubiquitin [Arabidopsis thaliana]
          Length = 137

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 23/112 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 39  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 91

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 92  ESTLHLVLR----------------LRGGMQIFVKTLTGKTISLEVESSDTI 127


>gi|224079387|ref|XP_002305847.1| predicted protein [Populus trichocarpa]
 gi|222848811|gb|EEE86358.1| predicted protein [Populus trichocarpa]
          Length = 369

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 10/132 (7%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           K+V +     +T++ +K ++ EKE       +L +AG+ L +       D +LAS N++ 
Sbjct: 86  KSVVVEARTYDTVQKIKAVILEKEQILPHQYNLVYAGEVLED-------DRSLASLNLQS 138

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTE--EIVKLKVKVLLTIRDLFCT 119
           E T+ L+F    +LS SV  P+ + +KLKVK F+  ++E   I+   + V ++  DL   
Sbjct: 139 EPTLHLIFNPKDLLSFSVITPAGETVKLKVK-FLYSVSEVKAIIGGVIGVPVSDYDLIYQ 197

Query: 120 GMKLKDCKTLAC 131
           G KL+D  +LAC
Sbjct: 198 GKKLEDSNSLAC 209



 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 75/141 (53%), Gaps = 13/141 (9%)

Query: 1   MKTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLM-NGRLIDYEDMALASPNV 59
           MKT T+ V++S+TI  +K    EKEG  +  Q+LFF GDRL  + R++DY         +
Sbjct: 8   MKTSTMKVQRSDTIGTIKSAFCEKEGIPKSFQELFFNGDRLKDDQRVVDY--------GI 59

Query: 60  KRESTMQLLFCAIKVLSISVKAPSDD---ILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
            +++T+ ++  +   + + V  PS     +++ +    V+ +   I++ K ++L    +L
Sbjct: 60  PKDATLHMILQSSVGVKLLVVIPSRQKSVVVEARTYDTVQKIKAVILE-KEQILPHQYNL 118

Query: 117 FCTGMKLKDCKTLACYGVKDD 137
              G  L+D ++LA   ++ +
Sbjct: 119 VYAGEVLEDDRSLASLNLQSE 139



 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 7/70 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TLNV + +T++++K  + +K G     Q + F+G RL         ++ LA  N+++
Sbjct: 235 KTITLNVHQRDTVEDVKDKIFQKLGGPSYCQSIVFSGKRLE-------ANLDLAYYNIRK 287

Query: 62  ESTMQLLFCA 71
            +T+ ++F  
Sbjct: 288 NATLHMVFSP 297


>gi|444434921|dbj|BAM77035.1| ubiquitin C [Homo sapiens]
          Length = 685

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/141 (34%), Positives = 77/141 (54%), Gaps = 16/141 (11%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-----RDL 116
           EST+ L+      + I VK  +   + L+V+      T E VK K++    I     R +
Sbjct: 64  ESTLHLVLRLRGGMQIFVKTLTGKTITLEVE---PSDTIENVKAKIQDKEGIPPDQQRSI 120

Query: 117 FCTGMKLKDCKTLACYGVKDD 137
           F  G +L+D +TL+ Y ++ +
Sbjct: 121 F-AGKQLEDGRTLSDYNIQKE 140



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 671

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 672 ESTLHLVL 679


>gi|443688720|gb|ELT91320.1| hypothetical protein CAPTEDRAFT_162204 [Capitella teleta]
          Length = 457

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444


>gi|432899994|ref|XP_004076672.1| PREDICTED: polyubiquitin-C-like [Oryzias latipes]
          Length = 533

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 520 ESTLHLVL 527


>gi|24657014|ref|NP_728908.1| Ubiquitin-63E, isoform A [Drosophila melanogaster]
 gi|24657019|ref|NP_523909.2| Ubiquitin-63E, isoform B [Drosophila melanogaster]
 gi|45552935|ref|NP_995994.1| Ubiquitin-63E, isoform C [Drosophila melanogaster]
 gi|442630045|ref|NP_001261383.1| Ubiquitin-63E, isoform D [Drosophila melanogaster]
 gi|302595965|sp|P0CG69.1|UBIQP_DROME RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|23092947|gb|AAF47806.3| Ubiquitin-63E, isoform A [Drosophila melanogaster]
 gi|23092948|gb|AAG22241.2| Ubiquitin-63E, isoform B [Drosophila melanogaster]
 gi|45445791|gb|AAS64964.1| Ubiquitin-63E, isoform C [Drosophila melanogaster]
 gi|440215267|gb|AGB94078.1| Ubiquitin-63E, isoform D [Drosophila melanogaster]
          Length = 763

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 671

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 672 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 713

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 714 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 748


>gi|24640086|ref|NP_727078.1| Ubiquitin-5E [Drosophila melanogaster]
 gi|194896187|ref|XP_001978429.1| GG17684 [Drosophila erecta]
 gi|22831806|gb|AAF46142.3| Ubiquitin-5E [Drosophila melanogaster]
 gi|190650078|gb|EDV47356.1| GG17684 [Drosophila erecta]
 gi|208879484|gb|ACI31287.1| GH17761p [Drosophila melanogaster]
          Length = 534

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 520 ESTLHLVL 527


>gi|46359622|dbj|BAD15290.1| polyubiquitin [Crassostrea gigas]
          Length = 685

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 671

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 672 ESTLHLVL 679


>gi|347966903|ref|XP_550846.3| AGAP001971-PA [Anopheles gambiae str. PEST]
 gi|333469848|gb|EAL38503.3| AGAP001971-PA [Anopheles gambiae str. PEST]
          Length = 1065

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 671

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 672 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 713

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 714 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 748



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 771 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 823

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 824 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 865

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 866 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 900



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2    KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
            KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 923  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 975

Query: 62   ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
            EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 976  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 1017

Query: 116  -------------LFCTGMKLKDCKTLACYGVKDD 137
                         L   G +L+D +TL+ Y ++ +
Sbjct: 1018 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 1052


>gi|270010560|gb|EFA07008.1| hypothetical protein TcasGA2_TC009978 [Tribolium castaneum]
          Length = 685

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 671

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 672 ESTLHLVL 679


>gi|195042539|ref|XP_001991451.1| GH12661 [Drosophila grimshawi]
 gi|193901209|gb|EDW00076.1| GH12661 [Drosophila grimshawi]
          Length = 699

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596


>gi|194866181|ref|XP_001971796.1| GG14240 [Drosophila erecta]
 gi|190653579|gb|EDV50822.1| GG14240 [Drosophila erecta]
          Length = 991

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 671

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 672 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 713

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 714 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 748



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 771 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 823

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 824 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 865

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 866 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 900



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 923 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 975

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 976 ESTLHLVL 983


>gi|170034793|ref|XP_001845257.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167876387|gb|EDS39770.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 1065

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 671

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 672 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 713

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 714 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 748



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 771 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 823

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 824 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 865

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 866 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 900



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2    KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
            KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 923  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 975

Query: 62   ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
            EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 976  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 1017

Query: 116  -------------LFCTGMKLKDCKTLACYGVKDD 137
                         L   G +L+D +TL+ Y ++ +
Sbjct: 1018 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 1052


>gi|157138587|ref|XP_001664266.1| ubiquitin [Aedes aegypti]
 gi|108880554|gb|EAT44779.1| AAEL003877-PA [Aedes aegypti]
          Length = 761

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 671

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 672 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 713

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 714 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 748


>gi|157138589|ref|XP_001664267.1| ubiquitin [Aedes aegypti]
 gi|241694258|ref|XP_002402192.1| ubiquitin/40S ribosomal protein S27A fusion, putative [Ixodes
           scapularis]
 gi|108880555|gb|EAT44780.1| AAEL003877-PB [Aedes aegypti]
 gi|215504684|gb|EEC14178.1| ubiquitin/40S ribosomal protein S27A fusion, putative [Ixodes
           scapularis]
          Length = 609

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596


>gi|21429768|gb|AAM50562.1| AT20865p [Drosophila melanogaster]
          Length = 1067

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 671

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 672 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 713

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 714 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 748



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 771 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 823

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 824 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 865

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 866 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 900



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2    KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
            KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 923  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 975

Query: 62   ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
            EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 976  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 1017

Query: 116  -------------LFCTGMKLKDCKTLACYGVKDD 137
                         L   G +L+D +TL+ Y ++ +
Sbjct: 1018 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 1052


>gi|2627129|dbj|BAA23486.1| polyubiquitin [Homo sapiens]
          Length = 609

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 58.9 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+T  VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITXEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 543 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 595

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 596 ESTLHLVL 603


>gi|27734407|gb|AAM51225.1| polyubiquitin [Bigelowiella natans]
          Length = 320

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 45/154 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+V+ S+TI  +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 13  KTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 65

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK---VKIFVKMLTEEIVKLKVKVLLTI----- 113
           EST+ L                  +L+L+   ++IFVK LT + + L V    TI     
Sbjct: 66  ESTLHL------------------VLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQ 107

Query: 114 ------------RDLFCTGMKLKDCKTLACYGVK 135
                       + L   G +L+D +TLA Y ++
Sbjct: 108 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 141



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 45/154 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+V+ S+TI  +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 167 KTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 219

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK---VKIFVKMLTEEIVKLKVKVLLTI----- 113
           EST+ L                  +L+L+   ++IFVK LT + + L V    TI     
Sbjct: 220 ESTLHL------------------VLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQ 261

Query: 114 ------------RDLFCTGMKLKDCKTLACYGVK 135
                       + L   G +L+D +TLA Y ++
Sbjct: 262 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 295


>gi|321469467|gb|EFX80447.1| hypothetical protein DAPPUDRAFT_243700 [Daphnia pulex]
          Length = 764

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 671

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 672 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 713

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 714 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 748


>gi|195448336|ref|XP_002071613.1| GK10077 [Drosophila willistoni]
 gi|194167698|gb|EDW82599.1| GK10077 [Drosophila willistoni]
          Length = 610

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596


>gi|195125345|ref|XP_002007139.1| GI12770 [Drosophila mojavensis]
 gi|193918748|gb|EDW17615.1| GI12770 [Drosophila mojavensis]
          Length = 991

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 671

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 672 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 713

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 714 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 748



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 771 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 823

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 824 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 865

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 866 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 900



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 923 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 975

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 976 ESTLHLVL 983


>gi|195132655|ref|XP_002010758.1| GI21526 [Drosophila mojavensis]
 gi|260830119|ref|XP_002610009.1| hypothetical protein BRAFLDRAFT_131116 [Branchiostoma floridae]
 gi|193907546|gb|EDW06413.1| GI21526 [Drosophila mojavensis]
 gi|229295371|gb|EEN66019.1| hypothetical protein BRAFLDRAFT_131116 [Branchiostoma floridae]
          Length = 609

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596


>gi|194762588|ref|XP_001963416.1| GF20300 [Drosophila ananassae]
 gi|190629075|gb|EDV44492.1| GF20300 [Drosophila ananassae]
 gi|389610665|dbj|BAM18944.1| ubiquitin [Papilio polytes]
          Length = 610

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596


>gi|158256510|dbj|BAF84228.1| unnamed protein product [Homo sapiens]
          Length = 609

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSATIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 543 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 595

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 596 ESTLHLVL 603


>gi|156358687|ref|XP_001624647.1| predicted protein [Nematostella vectensis]
 gi|170055263|ref|XP_001863505.1| polyubiquitin [Culex quinquefasciatus]
 gi|156211440|gb|EDO32547.1| predicted protein [Nematostella vectensis]
 gi|167875249|gb|EDS38632.1| polyubiquitin [Culex quinquefasciatus]
          Length = 533

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 520 ESTLHLVL 527


>gi|86515356|ref|NP_001034506.1| polyubiquitin [Tribolium castaneum]
 gi|21314343|gb|AAM46898.1|AF506022_1 polyubiquitin [Tribolium castaneum]
          Length = 685

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/141 (34%), Positives = 77/141 (54%), Gaps = 16/141 (11%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-----RDL 116
           EST+ L+      + I VK  +   + L+V+      T E VK K++    I     R +
Sbjct: 368 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVE---PSDTIENVKAKIQDKEGIPPDQQRSI 424

Query: 117 FCTGMKLKDCKTLACYGVKDD 137
           F  G +L+D +TL+ Y ++ +
Sbjct: 425 F-AGKQLEDGRTLSDYNIQKE 444



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 671

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 672 ESTLHLVL 679


>gi|1304128|dbj|BAA09860.1| polyubiquitin [Homo sapiens]
          Length = 611

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 58.9 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 28/147 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+      + I VK            PSD I  +K KI          + K  + 
Sbjct: 368 ESTLHLVLRLRGGMQIFVKTLTGKTITLEGEPSDTIENVKAKI----------QDKEGIP 417

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVKDD 137
              + L   G +L+D +TL+ Y ++ +
Sbjct: 418 PDQQRLIFAGKQLEDGRTLSDYNIQKE 444


>gi|301617753|ref|XP_002938291.1| PREDICTED: ubiquitin-like [Xenopus (Silurana) tropicalis]
          Length = 153

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L + R       +LA  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDCR-------SLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------ 115
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI +      
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQ 107

Query: 116 -----------LFCTGMKLKDCKTLACYGVK 135
                      L   G +L+D +TL  Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLCDYNIQ 138



 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLCDY--------NIQ 138

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 139 KESTLHLVL 147


>gi|79677329|emb|CAI77899.1| polyubiquitine protein [Collozoum inerme]
          Length = 112

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 25/113 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTI 99


>gi|391358178|sp|P0CG48.3|UBC_HUMAN RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|340068|gb|AAA36789.1| ubiquitin [Homo sapiens]
 gi|2647408|dbj|BAA23632.1| polyubiquitin UbC [Homo sapiens]
 gi|24657522|gb|AAH39193.1| Ubiquitin C [Homo sapiens]
 gi|28316336|dbj|BAC56951.1| polyubiquitin C [Homo sapiens]
 gi|440903539|gb|ELR54183.1| Polyubiquitin-C, partial [Bos grunniens mutus]
          Length = 685

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 671

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 672 ESTLHLVL 679


>gi|55742507|ref|NP_001006688.1| ubiquitin C [Xenopus (Silurana) tropicalis]
 gi|297693402|ref|XP_002824008.1| PREDICTED: polyubiquitin-C isoform 1 [Pongo abelii]
 gi|297693404|ref|XP_002824009.1| PREDICTED: polyubiquitin-C isoform 2 [Pongo abelii]
 gi|297693406|ref|XP_002824010.1| PREDICTED: polyubiquitin-C isoform 3 [Pongo abelii]
 gi|297693408|ref|XP_002824011.1| PREDICTED: polyubiquitin-C isoform 4 [Pongo abelii]
 gi|297693416|ref|XP_002824015.1| PREDICTED: polyubiquitin-C isoform 8 [Pongo abelii]
 gi|297693418|ref|XP_002824016.1| PREDICTED: polyubiquitin-C isoform 9 [Pongo abelii]
 gi|297693420|ref|XP_002824017.1| PREDICTED: polyubiquitin-C isoform 10 [Pongo abelii]
 gi|395745069|ref|XP_003778208.1| PREDICTED: polyubiquitin-C [Pongo abelii]
 gi|302595941|sp|P0CG66.1|UBC_GORGO RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|28316340|dbj|BAC56953.1| polyubiquitin C [Gorilla gorilla]
 gi|49257812|gb|AAH74652.1| ubiquitin C [Xenopus (Silurana) tropicalis]
 gi|89271842|emb|CAJ82066.1| novel protein [Xenopus (Silurana) tropicalis]
 gi|444434923|dbj|BAM77036.1| ubiquitin C [Homo sapiens]
          Length = 609

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596


>gi|194749344|ref|XP_001957099.1| GF10254 [Drosophila ananassae]
 gi|190624381|gb|EDV39905.1| GF10254 [Drosophila ananassae]
          Length = 837

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 671

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 672 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 713

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 714 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 748



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 771 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 823

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 824 ESTLHLVL 831


>gi|145046250|ref|NP_001013290.2| ubiquitin [Danio rerio]
          Length = 610

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596


>gi|213982779|ref|NP_001135561.1| uncharacterized protein LOC100216108 [Xenopus (Silurana)
           tropicalis]
 gi|126323857|ref|XP_001366753.1| PREDICTED: polyubiquitin [Monodelphis domestica]
 gi|332254371|ref|XP_003276301.1| PREDICTED: polyubiquitin-C isoform 1 [Nomascus leucogenys]
 gi|332254373|ref|XP_003276302.1| PREDICTED: polyubiquitin-C isoform 2 [Nomascus leucogenys]
 gi|332254377|ref|XP_003276304.1| PREDICTED: polyubiquitin-C isoform 4 [Nomascus leucogenys]
 gi|332254379|ref|XP_003276305.1| PREDICTED: polyubiquitin-C isoform 5 [Nomascus leucogenys]
 gi|441630332|ref|XP_004089532.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630335|ref|XP_004089533.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630338|ref|XP_004089534.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630344|ref|XP_004089536.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630354|ref|XP_004089537.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630357|ref|XP_004089538.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630362|ref|XP_004089539.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630365|ref|XP_004089540.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|119618869|gb|EAW98463.1| ubiquitin C, isoform CRA_a [Homo sapiens]
 gi|119618870|gb|EAW98464.1| ubiquitin C, isoform CRA_a [Homo sapiens]
 gi|119618871|gb|EAW98465.1| ubiquitin C, isoform CRA_a [Homo sapiens]
 gi|119618872|gb|EAW98466.1| ubiquitin C, isoform CRA_a [Homo sapiens]
 gi|195539774|gb|AAI68051.1| Unknown (protein for MGC:185560) [Xenopus (Silurana) tropicalis]
 gi|444434915|dbj|BAM77032.1| ubiquitin C [Homo sapiens]
          Length = 533

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 520 ESTLHLVL 527


>gi|148235355|ref|NP_001080865.1| ubiquitin C [Xenopus laevis]
 gi|32766481|gb|AAH54976.1| Ubc-prov protein [Xenopus laevis]
          Length = 609

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596


>gi|208022675|ref|NP_001129078.1| polyubiquitin-C [Pan troglodytes]
 gi|302595944|sp|P0CG64.1|UBC_PANTR RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595946|sp|P0CG61.1|UBC_PONPY RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|28316338|dbj|BAC56952.1| polyubiquitin C [Pan troglodytes]
 gi|28316342|dbj|BAC56954.1| polyubiquitin C [Pongo pygmaeus]
          Length = 761

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 671

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 672 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 713

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 714 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 748


>gi|297263833|ref|XP_002798871.1| PREDICTED: hypothetical protein LOC712934 isoform 2 [Macaca
           mulatta]
 gi|297263835|ref|XP_001102090.2| PREDICTED: hypothetical protein LOC712934 isoform 1 [Macaca
           mulatta]
 gi|297263839|ref|XP_002798873.1| PREDICTED: hypothetical protein LOC712934 isoform 4 [Macaca
           mulatta]
 gi|297263841|ref|XP_002798874.1| PREDICTED: hypothetical protein LOC712934 isoform 5 [Macaca
           mulatta]
 gi|297263843|ref|XP_002798875.1| PREDICTED: hypothetical protein LOC712934 isoform 6 [Macaca
           mulatta]
 gi|297263845|ref|XP_002798876.1| PREDICTED: hypothetical protein LOC712934 isoform 7 [Macaca
           mulatta]
 gi|297263847|ref|XP_002798877.1| PREDICTED: hypothetical protein LOC712934 isoform 8 [Macaca
           mulatta]
 gi|297263849|ref|XP_002798878.1| PREDICTED: hypothetical protein LOC712934 isoform 9 [Macaca
           mulatta]
 gi|402888093|ref|XP_003907411.1| PREDICTED: polyubiquitin-C isoform 1 [Papio anubis]
 gi|402888095|ref|XP_003907412.1| PREDICTED: polyubiquitin-C isoform 2 [Papio anubis]
 gi|402888097|ref|XP_003907413.1| PREDICTED: polyubiquitin-C isoform 3 [Papio anubis]
 gi|402888099|ref|XP_003907414.1| PREDICTED: polyubiquitin-C isoform 4 [Papio anubis]
 gi|402888101|ref|XP_003907415.1| PREDICTED: polyubiquitin-C isoform 5 [Papio anubis]
 gi|402888103|ref|XP_003907416.1| PREDICTED: polyubiquitin-C isoform 6 [Papio anubis]
 gi|402888105|ref|XP_003907417.1| PREDICTED: polyubiquitin-C isoform 7 [Papio anubis]
 gi|402888107|ref|XP_003907418.1| PREDICTED: polyubiquitin-C isoform 8 [Papio anubis]
 gi|402888109|ref|XP_003907419.1| PREDICTED: polyubiquitin-C isoform 9 [Papio anubis]
 gi|402888111|ref|XP_003907420.1| PREDICTED: polyubiquitin-C isoform 10 [Papio anubis]
 gi|441630368|ref|XP_004089541.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630371|ref|XP_004089542.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
          Length = 457

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444


>gi|189441656|gb|AAI67447.1| Zgc:172187 protein [Danio rerio]
          Length = 458

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444


>gi|56753927|gb|AAW25156.1| SJCHGC00176 protein [Schistosoma japonicum]
          Length = 457

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444


>gi|510473|emb|CAA52416.1| polyubiquitin [Artemia franciscana]
          Length = 697

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKQGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 671

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 672 ESTLHLVL 679


>gi|4586594|dbj|BAA76429.1| polyubiquitin [Cicer arietinum]
          Length = 108

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 23/112 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 99


>gi|226473058|emb|CAX71215.1| ubiquitin C [Schistosoma japonicum]
          Length = 456

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLTFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 391 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 443

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 444 ESTLHLVL 451


>gi|159472951|ref|XP_001694608.1| bi-ubiquitin [Chlamydomonas reinhardtii]
 gi|158276832|gb|EDP02603.1| bi-ubiquitin [Chlamydomonas reinhardtii]
 gi|300720946|gb|ADK33602.1| bi-ubiquitin [Chlamydomonas reinhardtii]
          Length = 153

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 18/103 (17%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKI 93
           EST+ L+        IKV +++ K       PSD I ++K ++
Sbjct: 64  ESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPSDTIERIKERV 106


>gi|578551|emb|CAA80337.1| ubiquitin [Tetrahymena pyriformis]
          Length = 379

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 42/151 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           KT+TL+V+ SE I+N+K  + +KEG   D Q L FAG +L +GR + DY        N++
Sbjct: 239 KTITLDVDSSENIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDY--------NIQ 290

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKV-------KVLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L V        V   I
Sbjct: 291 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVNSTDNIENVKAKI 334

Query: 114 RD----------LFCTGMKLKDCKTLACYGV 134
           +D          L   G +L+D ++L+ Y +
Sbjct: 335 QDKEGIPPDQQRLIFAGKQLEDGRSLSDYNI 365



 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           KT+TL V+ S+ I+N+K  + +KEG   D Q L FAG +L +GR I DY        N++
Sbjct: 87  KTITLEVDSSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTISDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKV-------KVLLTI 113
           +EST+ L+                  L+  + +FVK LT + + L V       KV   I
Sbjct: 139 KESTLHLVLR----------------LRGGIYLFVKTLTGKTITLDVEYNDTIEKVKAKI 182

Query: 114 RD----------LFCTGMKLKDCKTLACYGVKDD 137
           +D          L   G +L+D +T++ Y ++ D
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTVSDYNLQKD 216



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KTVTL+V ++++++N+K  + +KEG   D Q L FAG +L + R L DY        N++
Sbjct: 11  KTVTLDVAQTDSVENIKQKIQDKEGIPPDQQRLIFAGKQLEDARTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKV-------KVLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V        V   I
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVDSSDNIENVKAKI 106

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +T++ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTISDYNIQ 138


>gi|323714263|ref|NP_001071272.2| ubuquitin c [Danio rerio]
          Length = 533

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 520 ESTLHLVL 527


>gi|290991538|ref|XP_002678392.1| polyubiquitin [Naegleria gruberi]
 gi|284092004|gb|EFC45648.1| polyubiquitin [Naegleria gruberi]
          Length = 152

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 30/155 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           +T+TL VE +++I+N+K  V +KEG S D Q L FAG +L +GR I DY        N++
Sbjct: 11  RTITLEVESNDSIENVKQKVQDKEGISPDQQRLIFAGKQLEDGRTINDY--------NIQ 62

Query: 61  REST----------MQLLFCAIKVLSISVKAPSDDILK-LKVKIFVKMLTEEIVKLKVKV 109
           ++ST          MQL    +   +I+++  S+D ++ +K KIF K   E I   + + 
Sbjct: 63  KDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDK---EGIPSDQQR- 118

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVKDDRGVACFI 144
                 L   G +L+D +T+  Y ++ D  V   +
Sbjct: 119 ------LIYAGKQLEDGRTIGDYNLQKDSTVHLVL 147


>gi|326504848|dbj|BAK06715.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 153

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+T+ N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIK----------ERVEEKEGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQLADDKTAKDYNIE 138


>gi|384497521|gb|EIE88012.1| polyubiquitin [Rhizopus delemar RA 99-880]
          Length = 231

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KESTLHLVL----------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVKDD 137
                     + L   G +L+D +TL+ Y ++ +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 138

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 139 KESTLHLVL 147


>gi|401412470|ref|XP_003885682.1| Ubiquitin, related [Neospora caninum Liverpool]
 gi|325120102|emb|CBZ55656.1| Ubiquitin, related [Neospora caninum Liverpool]
          Length = 535

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 54.7 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 520 ESTLHLVL 527


>gi|17016983|gb|AAL33551.1|AF436850_1 polyubiquitin [Cucumis melo]
          Length = 143

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 23/112 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 50  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 102

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 103 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 138



 Score = 40.0 bits (92), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 40/123 (32%)

Query: 30  DIQDLFFAGDRLMNGRLIDYEDMALASPNVKRESTMQLLFCAIKVLSISVKAPSDDILKL 89
           D Q L FAG +L +GR        LA  N+++EST+ L+                  L+ 
Sbjct: 2   DQQRLIFAGKQLEDGR-------TLADYNIQKESTLHLVLR----------------LRG 38

Query: 90  KVKIFVKMLTEEIVKLKVKVLLTI-----------------RDLFCTGMKLKDCKTLACY 132
            ++IFVK LT + + L+V+   TI                 + L   G +L+D +TLA Y
Sbjct: 39  GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 98

Query: 133 GVK 135
            ++
Sbjct: 99  NIQ 101


>gi|60598636|gb|AAX25867.1| unknown [Schistosoma japonicum]
          Length = 183

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 30/147 (20%)

Query: 3   TVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKR 61
           T+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N+++
Sbjct: 12  TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+      + I VK            PSD I  +K KI  K   E I  ++ +  
Sbjct: 64  ESTLHLVLRLRGGMHIFVKTSTGKTITLEVEPSDTIENVKAKIQDK---EGIPPVQHR-- 118

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVKDD 137
                L   G + +D +T + Y ++ +
Sbjct: 119 -----LISAGKQSEDGRTSSDYTIQKE 140



 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRL-IDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG       L  AG +  +GR   DY         ++
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDKEGIPPVQHRLISAGKQSEDGRTSSDY--------TIQ 138

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 139 KESTLHLVL 147


>gi|224083970|ref|XP_002307191.1| predicted protein [Populus trichocarpa]
 gi|118481405|gb|ABK92645.1| unknown [Populus trichocarpa]
 gi|118486039|gb|ABK94863.1| unknown [Populus trichocarpa]
 gi|222856640|gb|EEE94187.1| predicted protein [Populus trichocarpa]
          Length = 157

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVK----------ERVEEKEGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQLGDDKTARDYNIE 138


>gi|196016942|ref|XP_002118320.1| hypothetical protein TRIADDRAFT_64418 [Trichoplax adhaerens]
 gi|190579096|gb|EDV19200.1| hypothetical protein TRIADDRAFT_64418 [Trichoplax adhaerens]
          Length = 457

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444


>gi|899115|gb|AAA96951.1| polyubiquitin, partial [Solanum tuberosum]
          Length = 99

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 23/107 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK 108
           EST+ L+                  L+  ++IFVK LT + + L+V+
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVE 94


>gi|387604502|gb|AFJ93197.1| ubiquitin, partial [Eremosparton songoricum]
          Length = 142

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 23/112 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 31  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 83

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 84  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 119



 Score = 39.3 bits (90), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFA 37
           KT+TL VE S+TI N+K  + +KEG   D Q L FA
Sbjct: 107 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFA 142


>gi|300422605|dbj|BAJ10868.1| ubiquitin C [Callithrix jacchus]
          Length = 99

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 25/113 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTI 99


>gi|58414947|gb|AAW73076.1| polyubiquitin [Sphaerozoum italicum]
          Length = 108

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 25/113 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTI 99


>gi|111140007|gb|ABH06365.1| ubiquitin [Sorbus aucuparia]
          Length = 141

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 23/112 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 29  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 81

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 82  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 117



 Score = 42.4 bits (98), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 25/37 (67%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAG 38
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG
Sbjct: 105 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 141


>gi|1050930|emb|CAA63349.1| polyubiquitin [Rattus norvegicus]
          Length = 100

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 25/113 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTI 99


>gi|58414945|gb|AAW73075.1| polyubiquitin [Collozoum sp. DDM-2005]
          Length = 112

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 25/113 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L V+   TI
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEASDTI 99


>gi|317056635|ref|YP_004105102.1| ubiquitin [Ruminococcus albus 7]
 gi|315448904|gb|ADU22468.1| ubiquitin [Ruminococcus albus 7]
          Length = 243

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 9/75 (12%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+T++N+K  + +KEG + D Q L FAG +L N + L DY        N++
Sbjct: 37  KTITLDVEPSDTVENVKAKIQDKEGVAPDAQRLIFAGKQLENNKTLADY--------NIQ 88

Query: 61  RESTMQLLFCAIKVL 75
           +EST+ ++F   +++
Sbjct: 89  KESTLHIIFNLTQIV 103


>gi|290971589|ref|XP_002668572.1| polyubiquitin [Naegleria gruberi]
 gi|290973569|ref|XP_002669520.1| polyubiquitin [Naegleria gruberi]
 gi|290982657|ref|XP_002674046.1| polyubiquitin [Naegleria gruberi]
 gi|290987245|ref|XP_002676333.1| polyubiquitin [Naegleria gruberi]
 gi|290987329|ref|XP_002676375.1| polyubiquitin [Naegleria gruberi]
 gi|290997377|ref|XP_002681258.1| polyubiquitin [Naegleria gruberi]
 gi|284082037|gb|EFC35828.1| polyubiquitin [Naegleria gruberi]
 gi|284083069|gb|EFC36776.1| polyubiquitin [Naegleria gruberi]
 gi|284087634|gb|EFC41302.1| polyubiquitin [Naegleria gruberi]
 gi|284089935|gb|EFC43589.1| polyubiquitin [Naegleria gruberi]
 gi|284089977|gb|EFC43631.1| polyubiquitin [Naegleria gruberi]
 gi|284094881|gb|EFC48514.1| polyubiquitin [Naegleria gruberi]
          Length = 152

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 30/155 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           +T+TL VE +++I+N+K  V +KEG S D Q L FAG +L +GR I DY        N++
Sbjct: 11  RTITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDY--------NIQ 62

Query: 61  REST----------MQLLFCAIKVLSISVKAPSDDILK-LKVKIFVKMLTEEIVKLKVKV 109
           ++ST          MQL    +   +I+++  S+D ++ +K KIF K   E I   + + 
Sbjct: 63  KDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDK---EGIPSDQQR- 118

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVKDDRGVACFI 144
                 L   G +L+D +T+  Y ++ D  V   +
Sbjct: 119 ------LIYAGKQLEDGRTIGDYNLQKDSTVHLVL 147


>gi|324539232|gb|ADY49558.1| Polyubiquitin-C, partial [Ascaris suum]
          Length = 148

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 25/116 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L+DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIENV 102



 Score = 43.5 bits (101), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAG 38
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG
Sbjct: 87  KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAG 123


>gi|328835774|dbj|BAK19068.1| ubiquitin [Ipomoea nil]
          Length = 121

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 23/112 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 21  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 73

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 74  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 109


>gi|195164961|ref|XP_002023314.1| GL20619 [Drosophila persimilis]
 gi|194105419|gb|EDW27462.1| GL20619 [Drosophila persimilis]
          Length = 231

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 43/153 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDLF--- 117
           +EST+ L+                  L+  ++IFVK L  +    + + L   R+ F   
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLDWQDHHPRGRALGHHRESFKAK 106

Query: 118 ---------------CTGMKLKDCKTLACYGVK 135
                            G +L+D +TL+ Y ++
Sbjct: 107 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 139



 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 164 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 215

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 216 KESTLHLVL 224



 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 42/139 (30%)

Query: 15  KNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQLLFCAIK 73
           ++ K  + +KEG   D Q L FAG +L +GR L DY        N+++EST+ L+     
Sbjct: 101 ESFKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKESTLHLVLR--- 149

Query: 74  VLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD-----------------L 116
                        L+  ++IFVK LT + + L+V+   TI +                 L
Sbjct: 150 -------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 196

Query: 117 FCTGMKLKDCKTLACYGVK 135
              G +L+D +TL+ Y ++
Sbjct: 197 IFAGKQLEDGRTLSDYNIQ 215


>gi|89114278|gb|ABD61727.1| polyubiquitin [Lupinus albus]
          Length = 132

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 23/107 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 45  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 97

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK 108
           EST+ L+                  L+  ++IFVK LT + + L+V+
Sbjct: 98  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVE 128


>gi|74024980|ref|XP_829056.1| polyubiquitin [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
 gi|70834442|gb|EAN79944.1| polyubiquitin, putative [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
          Length = 685

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        LA  N+++
Sbjct: 11  KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TLA Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKE 140



 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        LA  N+++
Sbjct: 163 KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TLA Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKE 292



 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        LA  N+++
Sbjct: 315 KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TLA Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKE 444



 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        LA  N+++
Sbjct: 467 KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLADYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TLA Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKE 596



 Score = 53.1 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        LA  N+++
Sbjct: 619 KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLADYNIQK 671

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 672 ESTLHLVL 679


>gi|77994697|gb|ABB13626.1| polyubiquitin [Aurigamonas solis]
          Length = 112

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 28/118 (23%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLDVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK---VKIFVKMLTEEIVKLKVKVLLTIRDL 116
           EST+ L                  +L+L+   ++IFVK LT + + L V+   TI ++
Sbjct: 64  ESTLHL------------------VLRLRGGSMQIFVKTLTGKTITLDVEPSDTIENV 103


>gi|342186084|emb|CCC95569.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 961

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        LA  N+++
Sbjct: 11  KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TLA Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKE 140



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        LA  N+++
Sbjct: 163 KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLADYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TLA Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKE 292



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        LA  N+++
Sbjct: 315 KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLADYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TLA Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKE 444



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        LA  N+++
Sbjct: 467 KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLADYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TLA Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKE 596



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        LA  N+++
Sbjct: 619 KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLADYNIQK 671

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 672 ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAK 713

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TLA Y ++ +
Sbjct: 714 IQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKE 748



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        LA  N+++
Sbjct: 771 KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLADYNIQK 823

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 824 ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAK 865

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TLA Y ++ +
Sbjct: 866 IQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKE 900


>gi|79677334|emb|CAI77900.1| polyubiquitine protein [Collozoum inerme]
          Length = 112

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 23/115 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           EST+ L+                  L+  ++IF K LT + + L V+   TI ++
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFAKTLTGKTITLDVESSDTISNV 102


>gi|281210011|gb|EFA84179.1| ubiquitin [Polysphondylium pallidum PN500]
          Length = 155

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 16/141 (11%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR L DY        N+ 
Sbjct: 11  KTITLEVEGSDSIENVKIKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIL 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLL----TIRDL 116
           +EST+ L+      + + V+  +  I+ L+V+   +  T E VK KV   L    T ++L
Sbjct: 63  KESTLHLVLRLRGGMQVFVETLNGKIITLEVE---ESDTIENVKAKVTEKLGYPPTQQNL 119

Query: 117 FCTGMKLKDCKTLACYGVKDD 137
            C   KL++ +TL  Y ++ +
Sbjct: 120 ICNKKKLENGRTLFDYNIQKE 140


>gi|149063235|gb|EDM13558.1| rCG21224 [Rattus norvegicus]
          Length = 163

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 25/108 (23%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 48  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 99

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK 108
           +EST+ L+                  L+  ++IFVK LT + + L V+
Sbjct: 100 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVE 131


>gi|27734349|gb|AAM51203.1| polyubiquitin [Cercomonas edax]
 gi|27734353|gb|AAM51205.1| polyubiquitin [Cercomonas edax]
 gi|27734355|gb|AAM51206.1| polyubiquitin [Cercomonas edax]
 gi|27734359|gb|AAM51208.1| polyubiquitin [Cercomonas edax]
 gi|27734363|gb|AAM51210.1| polyubiquitin [Cercomonas edax]
 gi|27734365|gb|AAM51211.1| polyubiquitin [Cercomonas edax]
          Length = 99

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 29/119 (24%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 4   KTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 56

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK----VKIFVKMLTEEIVKLKVKVLLTIRDL 116
           EST+ L                  +L+L+    ++IFVK LT + + L V+   TI ++
Sbjct: 57  ESTLHL------------------VLRLRGGSGMQIFVKTLTGKTITLDVESSDTIENV 97


>gi|27734377|gb|AAM51217.1| polyubiquitin [Cercomonas sp. ATCC 50316]
          Length = 177

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 46/155 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+ I+ +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 4   KTITLDVESSDMIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 56

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK----VKIFVKMLTEEIVKLKVKVLLTI---- 113
           EST+ L                  +L+L+    ++IFVK LT + + L V+   TI    
Sbjct: 57  ESTLHL------------------VLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVK 98

Query: 114 -------------RDLFCTGMKLKDCKTLACYGVK 135
                        + L   G +L+D +TLA Y ++
Sbjct: 99  QKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 133



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 29/116 (25%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+ +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 82  KTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 134

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK----VKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L                  +L+L+    ++IFVK LT + + L V+   TI
Sbjct: 135 ESTLHL------------------VLRLRGGSGMQIFVKTLTGKTITLDVESSDTI 172


>gi|145503723|ref|XP_001437835.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124404993|emb|CAK70438.1| unnamed protein product [Paramecium tetraurelia]
          Length = 271

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 44/159 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI  +K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTI------ 113
           EST+ L                  +L+L+  ++IF+K LT  ++ L V+   ++      
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFIKTLTGRLINLDVESTDSVESLKKQ 105

Query: 114 -----------RDLFCTGMKLKDCKTLACYGVKDDRGVA 141
                      + L  +G +L+D KTL  Y V+++  + 
Sbjct: 106 IQDKEGIPPNQQRLIFSGHQLEDEKTLLEYNVENESTIH 144


>gi|40647160|gb|AAR88386.1| polyubiquitin 1, partial [Plasmodiophora brassicae]
 gi|40647162|gb|AAR88387.1| polyubiquitin 2, partial [Plasmodiophora brassicae]
          Length = 175

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 45/154 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+V+  +TI+ +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 4   KTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 56

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK---VKIFVKMLTEEIVKLKVKVLLTI----- 113
           EST+ L                  +L+L+   ++IFVK LT + + L V    TI     
Sbjct: 57  ESTLHL------------------VLRLRGGTMQIFVKTLTGKTITLDVDSGDTIETVKA 98

Query: 114 ------------RDLFCTGMKLKDCKTLACYGVK 135
                       + L   G +L+D +TLA Y ++
Sbjct: 99  KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 132


>gi|296221018|ref|XP_002756700.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like, partial
          [Callithrix jacchus]
          Length = 138

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 9/70 (12%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 22 KTITLEVEPSDTIENVKPKIQDKEGIPPDQQHLIFAGKQLEDGRTLSDY--------NIQ 73

Query: 61 RESTMQLLFC 70
          +EST+ L+ C
Sbjct: 74 KESTLHLVLC 83


>gi|361584495|gb|AEW12070.1| polyubiquitin, partial [Drosophila melanogaster]
          Length = 231

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 30/148 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KE    + Q L F G  L NGR L DY        N++
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K +I  K   E I   + + 
Sbjct: 139 KESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDK---EGIPPDQQR- 194

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVKDD 137
                 L   G +L+D +TL+ Y ++ +
Sbjct: 195 ------LIFAGKQLEDGRTLSDYNIQKE 216



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  +H+KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223



 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KE    + Q L F G  L NGR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTIYLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G  L++ +TL+ Y ++ +
Sbjct: 107 QDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKE 140


>gi|254540256|gb|ACT66230.1| polyubiquitin protein [Piriformospora indica]
          Length = 196

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           + +TL VE S+T+ N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 2   RGITLEVESSDTMDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 53

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 54  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKI 97

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL+ Y ++
Sbjct: 98  QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 129



 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 25/113 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 78  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 129

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 130 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 166



 Score = 42.0 bits (97), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 25/37 (67%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAG 38
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG
Sbjct: 154 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAG 190


>gi|208891|gb|AAA72503.1| beta-galactosidase/ubiquitin fusion protein, partial [synthetic
           construct]
          Length = 116

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 25/114 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 19  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 70

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIR 114
           +EST+ L+                  L+  ++IFVK LT + + L V+  +T +
Sbjct: 71  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEPSVTTK 108


>gi|380030823|ref|XP_003699040.1| PREDICTED: polyubiquitin-A-like, partial [Apis florea]
          Length = 98

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 25/109 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+                  L+  ++IFVK LT + + L+V+ 
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEA 95


>gi|357116845|ref|XP_003560187.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60S ribosomal protein
           L40-like [Brachypodium distachyon]
          Length = 213

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 40/153 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+ I N+K  + +KEG   + Q L FAG +L NGR        LA  N+++
Sbjct: 11  KTITLEVESSDIIDNVKTKIQDKEGIPPEQQRLIFAGKQLDNGR-------TLADCNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI-------- 113
           EST+ L+                  L+ ++ IFVK LT + + L+V+   TI        
Sbjct: 64  ESTLHLVL----------------RLQGRMXIFVKTLTGKTITLEVESSDTIDNVKAKIQ 107

Query: 114 ---------RDLFCTGMKLKDCKTLACYGVKDD 137
                    + L   G +L D +TLA Y ++ +
Sbjct: 108 DKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKE 140



 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGR-------TLADYNIQK 139

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 140 ESTLHLVL 147


>gi|302407856|ref|XP_003001763.1| ubiquitin [Verticillium albo-atrum VaMs.102]
 gi|261359484|gb|EEY21912.1| ubiquitin [Verticillium albo-atrum VaMs.102]
          Length = 126

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 25/113 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           +EST+ L                   L+  ++IFVK LT + + L+V+   TI
Sbjct: 63  KESTLHLGLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 99


>gi|361584493|gb|AEW12069.1| polyubiquitin, partial [Drosophila melanogaster]
 gi|361584497|gb|AEW12071.1| polyubiquitin, partial [Drosophila melanogaster]
          Length = 231

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 30/148 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KE    + Q L F G  L NGR L DY        N++
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K +I  K   E I   + + 
Sbjct: 139 KESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDK---EGIPPDQQR- 194

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVKDD 137
                 L   G +L+D +TL+ Y ++ +
Sbjct: 195 ------LIFAGKQLEDGRTLSDYNIQKE 216



 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TIKN+K  + +KE    + Q L F G  L NGR L DY        N++
Sbjct: 11  KTITLEVEPSDTIKNVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTIYLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G  L++ +TL+ Y ++ +
Sbjct: 107 QDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKE 140



 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  +H+KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|148905884|gb|ABR16104.1| unknown [Picea sitchensis]
 gi|224286933|gb|ACN41169.1| unknown [Picea sitchensis]
          Length = 153

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR       +LA  N+++
Sbjct: 11  KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLDDGR-------SLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           ES++ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 64  ESSLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIERIK----------ERVEEKEGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G ++ D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQMNDDKTARDYNIE 138


>gi|361584491|gb|AEW12068.1| polyubiquitin, partial [Drosophila melanogaster]
          Length = 231

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 30/148 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KE    + Q L F G  L NGR L DY        N++
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+      + I VK            PSD I  +K +I  K   E I   + + 
Sbjct: 139 KESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDK---EGIPPDQQR- 194

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVKDD 137
                 L   G +L+D +TL+ Y ++ +
Sbjct: 195 ------LIFAGKQLEDGRTLSDYNIQKE 216



 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TIKN+K  + +KE    + Q L F G  L NGR L DY        N++
Sbjct: 11  KTITLEVEPSDTIKNVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTIYLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G  L++ +TL+ Y ++ +
Sbjct: 107 QDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKE 140



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++I+N+K  +H+KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|350426996|ref|XP_003494613.1| PREDICTED: polyubiquitin-A-like, partial [Bombus impatiens]
          Length = 136

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 25/116 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q + FAG +L +GR L DY        N++
Sbjct: 42  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRVIFAGKQLEDGRTLSDY--------NIQ 93

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++
Sbjct: 94  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEASDTIENV 133


>gi|40365361|gb|AAR85354.1| ubiquitin [Schistosoma mansoni]
          Length = 103

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 25/109 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+                  L+  ++IFVK LT + + L+V+ 
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEA 95


>gi|578549|emb|CAA80335.1| ubiquitin [Tetrahymena pyriformis]
          Length = 303

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 42/151 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           KT+TL+++ S+ I+N+K  + +KEG   D Q L FAG +L +GR + DY        N++
Sbjct: 163 KTITLDIDSSDNIENVKAKIQDKEGIPADQQRLIFAGKQLEDGRTVTDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKV-------KVLLTI 113
           +EST+ L+                  L+  ++IF+K LT + + L V       KV   I
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFMKTLTGKTITLDVNSADNIEKVKAQI 258

Query: 114 RD----------LFCTGMKLKDCKTLACYGV 134
           +D          L   G +L+D KT++ Y +
Sbjct: 259 QDKEGIPVDQQRLIFAGKQLEDGKTVSDYNI 289



 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           KT+TL+V +++ I+N+K  + +KEG   D Q L FAG +L + R + DY        N++
Sbjct: 87  KTITLDVAQTDNIENIKAKIQDKEGIPSDQQRLIFAGKQLEDERTVSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKV-------KVLLTI 113
           +EST+ L+                  L+  +++FVK LT + + L +        V   I
Sbjct: 139 KESTLHLVLR----------------LRGGMQVFVKTLTGKTITLDIDSSDNIENVKAKI 182

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +T+  Y ++
Sbjct: 183 QDKEGIPADQQRLIFAGKQLEDGRTVTDYNIQ 214



 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           KTV L+V  ++ I  +K  +++KEG   D Q L FAG +L +GR + DY        N++
Sbjct: 11  KTVALDVSSTDNIDTIKQKIYDKEGIPSDQQRLIFAGKQLEDGRTVSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKV-------KVLLTI 113
           +EST+ L+                  L+  +++FVK LT + + L V        +   I
Sbjct: 63  KESTVHLVLR----------------LRGGMQVFVKTLTGKTITLDVAQTDNIENIKAKI 106

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +T++ Y ++
Sbjct: 107 QDKEGIPSDQQRLIFAGKQLEDERTVSDYNIQ 138


>gi|323347583|gb|EGA81850.1| Ubi4p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 123

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 25/113 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 99


>gi|84337|pir||JT0492 ubiquitin 2 - Tetrahymena pyriformis (fragment)
 gi|598403|gb|AAA56862.1| ubiquitin, partial [Tetrahymena pyriformis]
          Length = 95

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 25/109 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+                  L+  ++IFVK LT + + L V+ 
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEA 95


>gi|40647164|gb|AAR88388.1| polyubiquitin 3, partial [Plasmodiophora brassicae]
          Length = 175

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 45/154 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+V+  +TI+ +K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 4   KTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 56

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK---VKIFVKMLTEEIVKLKV-------KVLL 111
           EST+ L                  +L+L+   ++IFVK LT + + L V        V  
Sbjct: 57  ESTLHL------------------VLRLRGGTMQIFVKTLTGKTITLDVDSGDAIETVKA 98

Query: 112 TIRD----------LFCTGMKLKDCKTLACYGVK 135
            I+D          L   G +L+D +TLA Y ++
Sbjct: 99  KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 132


>gi|426198671|gb|EKV48597.1| hypothetical protein AGABI2DRAFT_192160 [Agaricus bisporus var.
          bisporus H97]
          Length = 144

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 9/76 (11%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLFCAIKVLS 76
          +EST+ L+  ++ V S
Sbjct: 63 KESTLHLVLLSVAVSS 78


>gi|149063233|gb|EDM13556.1| rCG21222, isoform CRA_b [Rattus norvegicus]
          Length = 179

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 25/108 (23%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 64  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 115

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK 108
           +EST+ L+                  L+  ++IFVK LT + + L V+
Sbjct: 116 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVE 147



 Score = 43.1 bits (100), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 42/132 (31%)

Query: 24  KEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQLLFCAIKVLSISVKAP 82
           +EG   D Q L FAG +L +GR L DY        N+++EST+ L+              
Sbjct: 10  REGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKESTLHLVLR------------ 49

Query: 83  SDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD-----------------LFCTGMKLKD 125
               L+  ++IFVK LT + + L+V+   TI +                 L   G +L+D
Sbjct: 50  ----LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 105

Query: 126 CKTLACYGVKDD 137
            +TL+ Y ++ +
Sbjct: 106 GRTLSDYNIQKE 117


>gi|145524136|ref|XP_001447898.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415426|emb|CAK80501.1| unnamed protein product [Paramecium tetraurelia]
          Length = 637

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 9/138 (6%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI  +K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 127 KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 179

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK--VLLTIRDLFCT 119
           EST+ L+      + I VK  +   + L V+    +LT   ++++ K  +    + L   
Sbjct: 180 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSSTLLTLSRLQIQDKEGIPPDQQRLIFA 239

Query: 120 GMKLKDCKTLACYGVKDD 137
           G +L+D +TL+ Y ++ +
Sbjct: 240 GKQLEDGRTLSDYNIQKE 257



 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI  +K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 351 KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 403

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTI------ 113
           EST+ L                  +L+L+  ++IFVK LT + + L V+   TI      
Sbjct: 404 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAK 445

Query: 114 -----------RDLFCTGMKLKDCKTLACYGVKDD 137
                      + L   G +L+D +TL+ Y ++ +
Sbjct: 446 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 480



 Score = 52.0 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI  +K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 571 KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 623

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 624 ESTLHLVL 631



 Score = 41.6 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 18/138 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI  +K  + +KEG   D Q L FAG +L + + I     +  S  ++R
Sbjct: 503 KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAG-KLQHLKGIH----SPLSFEIER 557

Query: 62  ESTMQLLFCAI--KVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDLFCT 119
              +Q+    +  K +++ V+ PSD I  +K KI          + K  +    + L   
Sbjct: 558 WLRLQIFVKTLTGKTITLDVE-PSDTIDAVKAKI----------QDKEGIPPDQQRLIFA 606

Query: 120 GMKLKDCKTLACYGVKDD 137
           G +L+D +TL+ Y ++ +
Sbjct: 607 GKQLEDGRTLSDYNIQKE 624



 Score = 40.4 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 53/155 (34%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI  +K  + +KEG   D Q   F  +                  N+++
Sbjct: 60  KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQKTHFLQENY----------------NIQK 103

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTI------ 113
           EST+ L                  +L+L+  ++IFVK LT + + L V+   TI      
Sbjct: 104 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAK 145

Query: 114 -----------RDLFCTGMKLKDCKTLACYGVKDD 137
                      + L   G +L+D +TL+ Y ++ +
Sbjct: 146 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 180


>gi|323353866|gb|EGA85719.1| Ubi4p [Saccharomyces cerevisiae VL3]
          Length = 123

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 25/113 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 99



 Score = 35.8 bits (81), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 22/35 (62%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFF 36
           KT+TL VE S+TI N+K  + +KEG   D Q L  
Sbjct: 87  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIL 121


>gi|290760502|gb|ADD59803.1| polyubiquitin, partial [Cercozoa sp. CC005-Boundary Bay]
          Length = 114

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 29/119 (24%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK----VKIFVKMLTEEIVKLKVKVLLTIRDL 116
           EST+ L                  +L+L+    ++IFVK LT + + L V+   TI ++
Sbjct: 64  ESTLHL------------------VLRLRGGSGMQIFVKTLTGKTITLDVESSDTIENV 104


>gi|27734351|gb|AAM51204.1| polyubiquitin [Cercomonas edax]
          Length = 99

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 29/116 (25%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 4   KTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 56

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK----VKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L                  +L+L+    ++IFVK LT + + L V+   TI
Sbjct: 57  ESTLHL------------------VLRLRGGSGMQIFVKTLTGKTITLDVESSDTI 94


>gi|578545|emb|CAA84813.1| ubiquitin [Tetrahymena pyriformis]
          Length = 379

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 42/151 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           KT+TL+V+ S+ I+N+K  + +KEG   D Q L FAG +L +GR + DY        N++
Sbjct: 239 KTITLDVDSSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDY--------NIQ 290

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKV-------KVLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L V        V   I
Sbjct: 291 KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVNSTDNIENVKAKI 334

Query: 114 RD----------LFCTGMKLKDCKTLACYGV 134
           +D          L   G +L+D +++A Y +
Sbjct: 335 QDKEGIPPDQQRLIFAGKQLEDGRSIADYNI 365



 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           KT+TL+V+ ++ I+N+K  + +KEG   D Q L FAG +L +GR + DY        N++
Sbjct: 163 KTITLDVDSADNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKV-------KVLLTI 113
           +EST+ L+                  L+  +++FVK LT + + L V        V   I
Sbjct: 215 KESTLHLVLR----------------LRGGMQVFVKTLTGKTITLDVDSSDNIENVKAKI 258

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +T++ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTVSDYNIQ 290



 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           KTVTL+V  ++ I+N+K  + +KEG   D Q L FAG +L +GR + DY        N++
Sbjct: 11  KTVTLDVASTDNIENIKQKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  +++FVK LT + + L V     I +     
Sbjct: 63  KESTVHLVLR----------------LRGGMQVFVKTLTGKTITLDVAQTDNIENIKQKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVK 135
                       L   G +L+D +T++ Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTVSDYNIQ 138


>gi|290983078|ref|XP_002674256.1| polyubiquitin [Naegleria gruberi]
 gi|284087845|gb|EFC41512.1| polyubiquitin [Naegleria gruberi]
          Length = 152

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 42/161 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           +T+TL VE +++I+N+K  V +KEG S D Q L FAG +L +GR I DY        N++
Sbjct: 11  RTITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           ++ST+ L+                  L+  +++FVK LT + + ++++ + T+ +     
Sbjct: 63  KDSTLHLVLR----------------LRGGMQLFVKTLTGKTITIEMESIDTVENMKQKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDDRGVACFI 144
                       L   G +L+D +T++ Y ++ D  V   +
Sbjct: 107 FDKEGIPSDQQRLIYAGKQLEDGRTISDYNLQKDSTVHLVL 147


>gi|395846810|ref|XP_003796086.1| PREDICTED: polyubiquitin-C [Otolemur garnettii]
          Length = 100

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 10/93 (10%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLFCAIKVLSISVKAPSDDILKLKVKI 93
          +EST+ L+      + I    PSD    +K KI
Sbjct: 63 KESTLHLVLRLRGGMQI-FDEPSDTTENVKAKI 94


>gi|290974830|ref|XP_002670147.1| ubiquitin [Naegleria gruberi]
 gi|284083703|gb|EFC37403.1| ubiquitin [Naegleria gruberi]
          Length = 152

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 30/155 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           +T+TL VE +++I+N+K  V +KEG S D Q L FAG +L +GR I DY        N++
Sbjct: 11  RTITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDY--------NIQ 62

Query: 61  REST----------MQLLFCAIKVLSISVKAPSDDILK-LKVKIFVKMLTEEIVKLKVKV 109
           ++ST          MQL    +   +I+++  S+D ++ +K KIF K   E I   + + 
Sbjct: 63  KDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDK---EGIPSDQQR- 118

Query: 110 LLTIRDLFCTGMKLKDCKTLACYGVKDDRGVACFI 144
                 L   G +L+D +T+  Y ++ D  V   +
Sbjct: 119 ------LIYAGKQLEDGRTINDYNLQKDSTVHLVL 147


>gi|2654141|gb|AAB87694.1| polyubiquitin [Amoeba proteus]
          Length = 382

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE  ++I N+K  + +KEG   D Q L FAG +L +GR       +L+  N+++
Sbjct: 11  KTITLEVEPGDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------SLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTIR 114
           EST+ L+                  L+  ++IFVK LT + + L+V+       V   I+
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPGDSIDNVKQKIQ 107

Query: 115 D----------LFCTGMKLKDCKTLACYGVK 135
           D          L   G +L+D ++L+ Y ++
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQ 138



 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 40/151 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE  ++I N+K  + +KEG   D Q L FAG +L +GR       +L+  N+++
Sbjct: 239 KTITLEVEPGDSIDNVKEKIQDKEGIPPDQQRLIFAGKQLEDGR-------SLSDYNIQK 291

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTIR 114
           EST+ L+                  L+  ++IFVK LT + + L+V+       V   I+
Sbjct: 292 ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPGDSIDNVKQKIQ 335

Query: 115 D----------LFCTGMKLKDCKTLACYGVK 135
           D          L   G +L+D ++L+ Y ++
Sbjct: 336 DKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQ 366



 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMN-GRLIDYEDMALASPNVK 60
           KT+TL VE  ++I N+K  + +KEG   D Q L FAG +L + G L DY        N++
Sbjct: 163 KTITLEVEPGDSIDNVKQKIQDKEGIPPDGQGLIFAGKQLEDGGSLSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IF+K LT + + L+V+       V   I
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFIKTLTGKTITLEVEPGDSIDNVKEKI 258

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D ++L+ Y ++
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQ 290


>gi|237874153|ref|NP_001153849.1| ubiquitin C-like [Acyrthosiphon pisum]
 gi|239790549|dbj|BAH71829.1| hypothetical protein [Acyrthosiphon pisum]
          Length = 147

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 40/152 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S++I+N+  M+ +KEG   D Q L FA ++L   R        L++ N+  
Sbjct: 7   KTITLEVESSDSIENVMAMIQDKEGIPPDQQLLIFASNQLEKRR-------TLSNYNIHN 59

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDLFC--- 118
            ST+ L+             P DDI     +IF+K L  ++ K KVK   +I +L     
Sbjct: 60  GSTLHLVL-----------RPRDDI-----QIFIKELNGKMTKFKVKTSDSIENLRAKIH 103

Query: 119 --------------TGMKLKDCKTLACYGVKD 136
                          G +L++ +TL+ Y + D
Sbjct: 104 DKLGIIPDKHRLIFAGRQLENGRTLSSYKIHD 135


>gi|334361906|gb|AEG78310.1| ubiquitin, partial [Cucurbita pepo]
          Length = 141

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 23/112 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 30  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 82

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           E+T+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 83  ETTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 118



 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFA 37
           KT+TL VE S+TI N+K  + +KEG   D Q L FA
Sbjct: 106 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 141


>gi|115438809|ref|NP_001043684.1| Os01g0641200 [Oryza sativa Japonica Group]
 gi|302393767|sp|P0C032.2|RUB3_ORYSJ RecName: Full=Ubiquitin-like protein-NEDD8-like protein RUB3;
          Contains: RecName: Full=Ubiquitin-like protein;
          Contains: RecName: Full=NEDD8-like protein RUB3;
          AltName: Full=OsRUB3; AltName: Full=Ubiquitin-related
          protein 3; Flags: Precursor
 gi|20161535|dbj|BAB90457.1| putative polyubiquitin 2 [Oryza sativa Japonica Group]
 gi|20805124|dbj|BAB92795.1| putative polyubiquitin 2 [Oryza sativa Japonica Group]
 gi|113533215|dbj|BAF05598.1| Os01g0641200 [Oryza sativa Japonica Group]
 gi|125527016|gb|EAY75130.1| hypothetical protein OsI_03024 [Oryza sativa Indica Group]
 gi|125571348|gb|EAZ12863.1| hypothetical protein OsJ_02783 [Oryza sativa Japonica Group]
          Length = 154

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 7/79 (8%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
          KT+TL VE S+TI+N+K  V +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11 KTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62 ESTMQLLFCAIKVLSISVK 80
          EST+ L+      L++ V+
Sbjct: 64 ESTLHLVLRLRGGLNVKVR 82


>gi|6650740|gb|AAF21992.1| polyubiquitin [Lilium longiflorum]
          Length = 153

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 23/112 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + ++EG   D Q L FAG +L +GR        LA  N+ +
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDREGIPPDQQRLIFAGKQLEDGR-------TLADYNIHK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 64  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 99



 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 9/68 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  +H+KEG     + L FAG       L DY        N+++
Sbjct: 87  KTITLEVESSDTIDNVKAKIHDKEGIPPTTR-LIFAGTAEDGRTLADY--------NIQK 137

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 138 ESTLHLVL 145


>gi|403275421|ref|XP_003929446.1| PREDICTED: polyubiquitin-C-like, partial [Saimiri boliviensis
           boliviensis]
          Length = 113

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 25/116 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +G  L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGHTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENV 102


>gi|324546817|gb|ADY49718.1| Polyubiquitin-A, partial [Ascaris suum]
          Length = 119

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 25/108 (23%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK 108
           +EST+ L+                  L+  ++IFVK LT + + L+V+
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVE 94


>gi|290980934|ref|XP_002673186.1| polyubiquitin [Naegleria gruberi]
 gi|284086768|gb|EFC40442.1| polyubiquitin [Naegleria gruberi]
          Length = 152

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 30/154 (19%)

Query: 3   TVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVKR 61
           T+TL VE +++I+N+K  V +KEG S D Q L FAG +L +GR I DY        N+++
Sbjct: 12  TITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDY--------NIQK 63

Query: 62  EST----------MQLLFCAIKVLSISVKAPSDDILK-LKVKIFVKMLTEEIVKLKVKVL 110
           +ST          MQL    +   +I+++  S+D ++ +K KIF K   E I   + +  
Sbjct: 64  DSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDK---EGIPSDQQR-- 118

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVKDDRGVACFI 144
                L   G +L+D +T+  Y ++ D  V   +
Sbjct: 119 -----LIYAGKQLEDGRTIGDYNLQKDSTVHLVL 147



 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           KT+T+ +E ++T++N+K  + +KEG   D Q L +AG +L +GR I DY        N++
Sbjct: 87  KTITIEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRTIGDY--------NLQ 138

Query: 61  RESTMQLLF 69
           ++ST+ L+ 
Sbjct: 139 KDSTVHLVL 147


>gi|58414953|gb|AAW73079.1| polyubiquitin [Thaumatomonas sp. DDM-2005]
          Length = 102

 Score = 59.3 bits (142), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 29/116 (25%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK----VKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L                  +L+L+    ++IFVK LT + + L V+   TI
Sbjct: 64  ESTLHL------------------VLRLRGGSGMQIFVKTLTGKTITLDVESSDTI 101


>gi|443924531|gb|ELU43531.1| phosphomannomutase [Rhizoctonia solani AG-1 IA]
          Length = 446

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 9/70 (12%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 370 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 421

Query: 61  RESTMQLLFC 70
           +EST+ L  C
Sbjct: 422 KESTLHLDLC 431


>gi|290760492|gb|ADD59798.1| polyubiquitin, partial [Cercozoa sp. Brady Beach 2007]
          Length = 114

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 29/116 (25%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK----VKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L                  +L+L+    ++IFVK LT + + L V+   TI
Sbjct: 64  ESTLHL------------------VLRLRGGSGMQIFVKTLTGKTITLDVESSDTI 101


>gi|157093351|gb|ABV22330.1| ubiquitin [Noctiluca scintillans]
          Length = 95

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 25/109 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKV 109
           +EST+ L+                  L+  ++IFVK LT + + L V+ 
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLDVEA 95


>gi|443917299|gb|ELU38056.1| ubiquitin domain-containing protein [Rhizoctonia solani AG-1 IA]
          Length = 179

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 10/82 (12%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLFCAIKVL-SISVKA 81
          +EST+ L+   + V+ S+S+++
Sbjct: 63 KESTLHLVLRYVSVVESLSLRS 84


>gi|7862066|gb|AAF70460.1|AF240445_1 polyubiquitin [Populus tremula x Populus tremuloides]
          Length = 154

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+ I N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDAIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIK----------ERVEEKEGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQLGDDKTARDYNIE 138


>gi|339232996|ref|XP_003381615.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979549|gb|EFV62331.1| ubiquitin family protein [Trichinella spiralis]
          Length = 189

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+KG + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 85  KTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 136

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 137 KESTLHLVL 145



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 42/148 (28%)

Query: 8   VEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQ 66
           V  S++I+N KG + +KEG   D Q L FAG +L +GR L DY        N+++EST+ 
Sbjct: 15  VHPSDSIENEKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKESTLH 66

Query: 67  LLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----------- 115
           L+                  L+  ++IFVK LT + + L+V+   TI +           
Sbjct: 67  LVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGI 110

Query: 116 ------LFCTGMKLKDCKTLACYGVKDD 137
                 L   G +L+D +TL+ Y ++ +
Sbjct: 111 PPDQQRLIFAGKQLEDGRTLSDYNIQKE 138


>gi|1353757|gb|AAB01784.1| ubiquitin, partial [Naegleria fowleri]
          Length = 121

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 25/116 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE ++TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 10  KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 61

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI ++
Sbjct: 62  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESNDTIENV 101



 Score = 38.9 bits (89), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 25/36 (69%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFA 37
           KT+TL VE ++TI+N+K  + +KEG   D Q L FA
Sbjct: 86  KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFA 121


>gi|170034791|ref|XP_001845256.1| ubiquitin [Culex quinquefasciatus]
 gi|167876386|gb|EDS39769.1| ubiquitin [Culex quinquefasciatus]
          Length = 154

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 41/151 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE  +TI+N+KG + +KEG   D Q L FAG +L +GR       AL+  NV++
Sbjct: 11  KTITLDVEPVDTIQNIKGKIEDKEGIPPDQQRLIFAGKQLEDGR-------ALSDYNVQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLT-----------EEIVKLKVKVL 110
            ST+ L+                  L+   +IFVKMLT           + +  LK +V 
Sbjct: 64  GSTLHLVLR----------------LRGGFQIFVKMLTGRCFTVDIEQEDTVDTLKQRVS 107

Query: 111 LTIRD-------LFCTGMKLKDCKTLACYGV 134
             + +       L   G +L+D +T+  Y V
Sbjct: 108 ERLEEMPANQCRLIFAGKQLEDGRTVGEYSV 138


>gi|149260017|ref|XP_985698.2| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Mus musculus]
          Length = 203

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TIKN+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 88  KTITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 139

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 140 KESTLHLVL 148


>gi|118484809|gb|ABK94272.1| unknown [Populus trichocarpa]
          Length = 154

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 28/145 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+        IKV +++ K       P+D I ++K          E V+ K  + 
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIK----------ERVEEKEGIP 113

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVK 135
              + L   G +L D KT   Y ++
Sbjct: 114 PVQQRLIYAGKQLGDDKTARDYNIE 138


>gi|339263786|ref|XP_003366981.1| putative ubiquitin family protein [Trichinella spiralis]
 gi|316954189|gb|EFV46183.1| putative ubiquitin family protein [Trichinella spiralis]
          Length = 81

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 25/105 (23%)

Query: 4   VTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRE 62
           +TL VE S+TI+N+KG + +KEG   D Q L FAG +L +GR L DY        N+++E
Sbjct: 1   ITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKE 52

Query: 63  STMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKV 107
           ST+ L+                  L+  ++IFVK LT + + L+V
Sbjct: 53  STLHLVLR----------------LRGGMQIFVKTLTGKTITLEV 81


>gi|390334818|ref|XP_003724023.1| PREDICTED: uncharacterized protein LOC754856 [Strongylocentrotus
           purpuratus]
          Length = 1673

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVK-------VLLT 112
           EST+ L                  +L+L+  ++IFVK LT + + L+V+       V   
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAK 257

Query: 113 IRD----------LFCTGMKLKDCKTLACYGVKDD 137
           I+D          L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVK-------VLLT 112
           EST+ L                  +L+L+  ++IFVK LT + + L+V+       V   
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAK 409

Query: 113 IRD----------LFCTGMKLKDCKTLACYGVKDD 137
           I+D          L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVK-------VLLT 112
           EST+ L                  +L+L+  ++IFVK LT + + L+V+       V   
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAK 561

Query: 113 IRD----------LFCTGMKLKDCKTLACYGVKDD 137
           I+D          L   G +L+D +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596



 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 619 KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 671

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVK-------VLLT 112
           EST+ L                  +L+L+  ++IFVK LT + + L+V+       V   
Sbjct: 672 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAK 713

Query: 113 IRD----------LFCTGMKLKDCKTLACYGVKDD 137
           I+D          L   G +L+D +TL+ Y ++ +
Sbjct: 714 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 748



 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 771 KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 823

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVK-------VLLT 112
           EST+ L                  +L+L+  ++IFVK LT + + L+V+       V   
Sbjct: 824 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAK 865

Query: 113 IRD----------LFCTGMKLKDCKTLACYGVKDD 137
           I+D          L   G +L+D +TL+ Y ++ +
Sbjct: 866 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 900



 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 44/155 (28%)

Query: 2    KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
            KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 923  KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 975

Query: 62   ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVK-------VLLT 112
            EST+ L                  +L+L+  ++IFVK LT + + L+V+       V   
Sbjct: 976  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAK 1017

Query: 113  IRD----------LFCTGMKLKDCKTLACYGVKDD 137
            I+D          L   G +L+D +TL+ Y ++ +
Sbjct: 1018 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 1052



 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 44/155 (28%)

Query: 2    KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
            KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 1075 KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 1127

Query: 62   ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVK-------VLLT 112
            EST+ L                  +L+L+  ++IFVK LT + + L+V+       V   
Sbjct: 1128 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAK 1169

Query: 113  IRD----------LFCTGMKLKDCKTLACYGVKDD 137
            I+D          L   G +L+D +TL+ Y ++ +
Sbjct: 1170 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 1204



 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 44/155 (28%)

Query: 2    KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
            KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 1227 KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 1279

Query: 62   ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVK-------VLLT 112
            EST+ L                  +L+L+  ++IFVK LT + + L+V+       V   
Sbjct: 1280 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAK 1321

Query: 113  IRD----------LFCTGMKLKDCKTLACYGVKDD 137
            I+D          L   G +L+D +TL+ Y ++ +
Sbjct: 1322 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 1356



 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 44/155 (28%)

Query: 2    KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
            KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 1379 KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 1431

Query: 62   ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVK-------VLLT 112
            EST+ L                  +L+L+  ++IFVK LT + + L+V+       V   
Sbjct: 1432 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAK 1473

Query: 113  IRD----------LFCTGMKLKDCKTLACYGVKDD 137
            I+D          L   G +L+D +TL+ Y ++ +
Sbjct: 1474 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 1508



 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 44/155 (28%)

Query: 2    KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
            KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 1531 KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 1583

Query: 62   ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVK-------VLLT 112
            EST+ L                  +L+L+  ++IFVK LT + + L+V+       V   
Sbjct: 1584 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAK 1625

Query: 113  IRD----------LFCTGMKLKDCKTLACYGVKDD 137
            I+D          L   G +L+D +TL+ Y ++ +
Sbjct: 1626 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 1660



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 40/153 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S++I+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTIR 114
             T    +                 L++ ++IFVK LT + + L+V+       V   I+
Sbjct: 64  XQTFLFFYS----------------LQVNMQIFVKTLTGKTITLEVEPSDSIENVKAKIQ 107

Query: 115 D----------LFCTGMKLKDCKTLACYGVKDD 137
           D          L   G +L+D +TL+ Y ++ +
Sbjct: 108 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140


>gi|333466063|gb|AEF33800.1| Ubi-gD2tr [synthetic construct]
          Length = 383

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|302655191|ref|XP_003019389.1| hypothetical protein TRV_06592 [Trichophyton verrucosum HKI 0517]
 gi|291183107|gb|EFE38744.1| hypothetical protein TRV_06592 [Trichophyton verrucosum HKI 0517]
          Length = 438

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 28/148 (18%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 15  KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 66

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFV-KMLTEEI--------VKLKVK--- 108
           +EST+ L      VL +  +  ++ I +  VK    K +T E+        VK K++   
Sbjct: 67  KESTLHL------VLRLRGETTTNTISQPVVKTLTGKTITLEVESSDTIDNVKTKIQDKE 120

Query: 109 -VLLTIRDLFCTGMKLKDCKTLACYGVK 135
            +    + L   G +L+D +TL+ Y ++
Sbjct: 121 GIPPDQQRLIFAGKQLEDGRTLSDYNIQ 148



 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 31/46 (67%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI 47
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR +
Sbjct: 173 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTL 218


>gi|323308175|gb|EGA61425.1| Ubi4p [Saccharomyces cerevisiae FostersO]
          Length = 131

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 25/113 (22%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 34  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 85

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 86  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 122


>gi|46811235|gb|AAT01911.1| 40S ribosomal protein S27A [Pseudopleuronectes americanus]
          Length = 116

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR + Y        N+++
Sbjct: 23 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSYY-------NIQK 75

Query: 62 ESTMQLLF 69
          EST+ L+ 
Sbjct: 76 ESTLHLVL 83


>gi|161281|gb|AAA29989.1| ubiquitin, partial [Spodoptera frugiperda]
          Length = 76

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLGDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+F
Sbjct: 63 KESTLHLVF 71


>gi|309266537|ref|XP_003086791.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Mus musculus]
          Length = 203

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TIKN+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 88  KTITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 139

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 140 KESTLHLVL 148


>gi|70780322|gb|AAZ08412.1| polyubiquitin [Populus alba]
          Length = 139

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 23/112 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 44  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 96

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           EST  L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 97  ESTPHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 132


>gi|357111457|ref|XP_003557529.1| PREDICTED: polyubiquitin 3-like [Brachypodium distachyon]
          Length = 151

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 15/148 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLADGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAP-SDDILKLKVKIFVKMLTEEIVKLKVKVLLTI----RDL 116
           EST+ L+      + I V+   S   + L+V+    + T +IVK K++  + I    + L
Sbjct: 64  ESTLHLVLRLRGGMQIIVQHYVSMTTITLEVE---PLYTIDIVKAKIQDTVGIPAGEQRL 120

Query: 117 FCTGMKLKDCKTLACYGVKDDRGVACFI 144
              G +++D  TLA   ++++  +   I
Sbjct: 121 IFAGRQVEDGCTLADCSIQNESTLTLII 148


>gi|578546|emb|CAA84814.1| ubiquitin [Tetrahymena pyriformis]
          Length = 379

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 16/138 (11%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           KT+TL+V+ S+ I+N+K  + +KEG   D Q L FAG +L +GR + DY        N++
Sbjct: 239 KTITLDVDSSDNIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTVSDY--------NIQ 290

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK----VLLTIRDL 116
           +EST+ L+      + I VK  +   L L +     +   E VK K++    +    + L
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTLTLDINSTDNI---ENVKAKIQDKEGIPTDQQRL 347

Query: 117 FCTGMKLKDCKTLACYGV 134
              G +L+D +T++ Y +
Sbjct: 348 IFAGKQLEDGRTVSDYNI 365



 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           KT+TL+V +++ I+N+K  + +KEG   D Q L FAG +L +GR + DY        N++
Sbjct: 87  KTITLDVAQTDNIENIKAKIQDKEGIPSDQQRLIFAGKQLEDGRTVSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  +++FVK LT + + L+V        +   I
Sbjct: 139 KESTLHLVLR----------------LRGGMQVFVKTLTGKTITLEVNSSDNIESIKSKI 182

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D + ++ Y ++
Sbjct: 183 QDKEGIPSDQQRLIFAGKQLEDGRNISDYNIQ 214



 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           KTVTL+V  ++ I+N+K  + +KEG   D Q L FAG +L  GR + DY        N++
Sbjct: 11  KTVTLDVASTDNIENIKQKIQDKEGIPSDQQRLIFAGKQLEEGRTVSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKV-------KVLLTI 113
           +EST+ L+                  L+  +++FVK LT + + L V        +   I
Sbjct: 63  KESTVHLVLR----------------LRGGMQVFVKTLTGKTITLDVAQTDNIENIKAKI 106

Query: 114 RD----------LFCTGMKLKDCKTLACYGVK 135
           +D          L   G +L+D +T++ Y ++
Sbjct: 107 QDKEGIPSDQQRLIFAGKQLEDGRTVSDYNIQ 138


>gi|118370604|ref|XP_001018503.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300270|gb|EAR98258.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 384

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 42/151 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           KT+TL++E S+TI+N+K  + +KEG   D Q L FAG +L +G+++ DY        N++
Sbjct: 163 KTITLDLEVSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLDDGKILSDY--------NIQ 214

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + V L ++   TI +     
Sbjct: 215 KESTLHLVLR----------------LRGGMQIFVKTLTGKTVTLDLESCDTIENVKAKI 258

Query: 116 ------------LFCTGMKLKDCKTLACYGV 134
                       L   G +L D KT++ Y +
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLDDSKTISDYNI 289



 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 42/151 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL +E S+TI+ +K  + +KEG   D Q L FAG +L +G+ L DY        N++
Sbjct: 11  KTITLGLEVSDTIEGIKAKIQDKEGIPPDQQRLIFAGKQLDDGKTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + V L ++   TI +     
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTVTLDLEPCDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGV 134
                       L   G +L D KT++ Y +
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLDDSKTISDYNI 137



 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL++E S+TI+N+K  + +KEG   D Q L F+G  L + R L DY        N++
Sbjct: 315 KTITLDLEASDTIENVKSKIQDKEGIPPDQQRLIFSGKCLEDTRTLSDY--------NIQ 366

Query: 61  RESTMQLLF 69
           +E T+ L+ 
Sbjct: 367 KEQTLHLVL 375


>gi|361584499|gb|AEW12072.1| polyubiquitin, partial [Drosophila melanogaster]
          Length = 231

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KE    + Q L F G  L NGR L DY        N++
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDY--------NIQ 138

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK-------VLLTI 113
           +EST+ L+                  L+  ++IFVK LT + + L+V+       V   I
Sbjct: 139 KESTIYLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDSLENVKARI 182

Query: 114 RD----------LFCTGMKLKDCKTLACYGVKDD 137
            D          L   G +L+D +TL+ Y ++ +
Sbjct: 183 HDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 216



 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 42/154 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KE    + Q L F G  L NGR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD----- 115
           +EST+ L+                  L+  ++IFVK LT + + L+V+   TI +     
Sbjct: 63  KESTIYLVLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106

Query: 116 ------------LFCTGMKLKDCKTLACYGVKDD 137
                       L   G  L++ +TL+ Y ++ +
Sbjct: 107 QDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKE 140



 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S++++N+K  +H+KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVEPSDSLENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|308480326|ref|XP_003102370.1| hypothetical protein CRE_04940 [Caenorhabditis remanei]
 gi|308262036|gb|EFP05989.1| hypothetical protein CRE_04940 [Caenorhabditis remanei]
          Length = 194

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 25/116 (21%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 86  KTITLEVEASDTIENVKAKIQDKEGIPADQQRLIFAGKQLEDGRTLSDY--------NIQ 137

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L+                  L+  +++FVK LT + + L V+   TI ++
Sbjct: 138 KESTLHLVLR----------------LRGGMQMFVKTLTGKTITLDVEASDTIENV 177


>gi|221122833|ref|XP_002155023.1| PREDICTED: polyubiquitin-C, partial [Hydra magnipapillata]
          Length = 530

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 28/154 (18%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE ++TI+N+K  + +K+G   D Q L FAG  L + R + Y        NV++
Sbjct: 310 KTITLEVELADTIENVKARIQDKKGFLPDQQRLIFAGKELEDDRTLSYY-------NVQK 362

Query: 62  ESTMQLLFCAIKVLSISVKA-----------PSDDILKLKVKIFVKMLTEEIVKLKVKVL 110
           EST+ L+      ++I VK            P+D I  +K KI  K            V 
Sbjct: 363 ESTLHLVLRLRGSMNIFVKTLTGKTITLEVEPADTIDNVKAKIHDKE----------GVP 412

Query: 111 LTIRDLFCTGMKLKDCKTLACYGVKDDRGVACFI 144
           L  + LF  G +L++ +TL+ Y ++    +  F+
Sbjct: 413 LDQQSLFFAGKELENERTLSDYNIQKKYTLDLFL 446



 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 16/141 (11%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE ++TI N+K  +H+KEG   D Q LFFAG  L N R L DY        N++
Sbjct: 386 KTITLEVEPADTIDNVKAKIHDKEGVPLDQQSLFFAGKELENERTLSDY--------NIQ 437

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVK----VLLTIRDL 116
           ++ T+ L       + I+VK  +  I+ L+V       T   +K K+     +L     L
Sbjct: 438 KKYTLDLFLRIEGGMRINVKTLTRKIITLEVN---PANTINNIKAKISDMDCILPDQHVL 494

Query: 117 FCTGMKLKDCKTLACYGVKDD 137
              G +L + ++L+ Y ++ +
Sbjct: 495 TFNGQQLDNERSLSSYNIESE 515



 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 27/114 (23%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE ++TI+N+K  + +KEG   D Q L FAG  L + R + Y        NV++
Sbjct: 159 KTITLEVEPADTIENVKAKIQDKEGFLPDQQRLIFAGKELEDDRTLSYY-------NVQK 211

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L                  +L+L+  ++IFVK LT +   L+V+   TI
Sbjct: 212 ESTLHL------------------VLRLRGGMQIFVKTLTGKTFTLEVEPANTI 247



 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 20/138 (14%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           K +TL VE ++TIK  K  + +KEG     Q L FA  +L +GR L+DY        N++
Sbjct: 11  KIMTLEVEPADTIK--KAKIQDKEGIPPAYQHLIFANKKLEDGRTLVDY--------NIQ 60

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI----RDL 116
           + S + L+   I    I +K  +  I+ L+V+   ++ T E VK  +KV   +    + L
Sbjct: 61  KNSCLYLVEVGIG--QIHIKTLTSKIISLEVE---RINTIEDVKENIKVREGVPPDQQRL 115

Query: 117 FCTGMKLKDCKTLACYGV 134
           F  G  LKD +TL+ Y +
Sbjct: 116 FFAGNILKDERTLSDYNI 133



 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 45/153 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT TL VE + TI  +K  + +KEG   D Q L F G        I  ED  L+  NV++
Sbjct: 235 KTFTLEVEPANTIDEVKAKICDKEGVPPDQQRLIFHG--------ILLEDATLSDCNVQK 286

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           +S +QL                  +L+L+  ++IFVK LT + + L+V++  TI +    
Sbjct: 287 KSVLQL------------------VLRLRGGMQIFVKTLTGKTITLEVELADTIENVKAR 328

Query: 116 -------------LFCTGMKLKDCKTLACYGVK 135
                        L   G +L+D +TL+ Y V+
Sbjct: 329 IQDKKGFLPDQQRLIFAGKELEDDRTLSYYNVQ 361



 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 46/154 (29%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           K ++L VE+  TI+++K  +  +EG   D Q LFFAG+ L + R L DY        N+ 
Sbjct: 83  KIISLEVERINTIEDVKENIKVREGVPPDQQRLFFAGNILKDERTLSDY--------NIL 134

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD--- 115
           +ES +Q                   +L+L+  +KIFVK LT + + L+V+   TI +   
Sbjct: 135 KESILQ------------------HVLRLEGDMKIFVKTLTGKTITLEVEPADTIENVKA 176

Query: 116 --------------LFCTGMKLKDCKTLACYGVK 135
                         L   G +L+D +TL+ Y V+
Sbjct: 177 KIQDKEGFLPDQQRLIFAGKELEDDRTLSYYNVQ 210


>gi|48375058|gb|AAT42196.1| polyubiquitin [Gromia oviformis]
          Length = 113

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 28/118 (23%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+V  S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLDVNSSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK---VKIFVKMLTEEIVKLKVKVLLTIRDL 116
           EST+ L                  +L+L+   ++IFVK LT + + L V    TI ++
Sbjct: 64  ESTLHL------------------VLRLRGGSMQIFVKTLTGKTITLDVNSSDTIENV 103


>gi|224159432|ref|XP_002338082.1| predicted protein [Populus trichocarpa]
 gi|222870685|gb|EEF07816.1| predicted protein [Populus trichocarpa]
          Length = 118

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 18/103 (17%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLF-----CAIKVLSISVK------APSDDILKLKVKI 93
           EST+ L+        IKV +++ K       P+D I ++K ++
Sbjct: 64  ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERV 106


>gi|110589533|gb|ABG77272.1| ubiquitin-53aa extension protein [Pieris rapae]
          Length = 129

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEGT  D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEASDTIENVKAKIQDKEGTPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|82792659|gb|ABB91375.1| ubiquitin-53aa extension protein [Helicoverpa assulta]
          Length = 129

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEGT  D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEASDTIENVKAKIQDKEGTPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|56684130|gb|AAW22168.1| polyubiquitin [Monocercomonoides sp. PA203]
          Length = 229

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE ++TI+++K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVENADTIESVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLQDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI------- 113
           +E+T+ L+                  L+  ++IFVK LT + + L+V+   TI       
Sbjct: 63  KEATLHLVLR----------------LRGGMQIFVKTLTGKTITLEVENADTIESVKQKI 106

Query: 114 ----------RDLFCTGMKLKDCKTLACYGVK 135
                     + L   G +L+D +TL  Y ++
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLQDYNIQ 138



 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE ++TI+++K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVENADTIESVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLQDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +E+T+ L+ 
Sbjct: 215 KEATLHLVL 223


>gi|224503947|gb|ACN53545.1| polyubiquitin-like protein [Piriformospora indica]
          Length = 229

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 42/152 (27%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI ++K  + +KEG   D Q L FAG +L +GR L DY        +++
Sbjct: 11  KTITLEVESSDTIDDVKTNIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------DIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRDL---- 116
           +EST+ L+                  L+  ++IF+K LT + + L+V+   TI D+    
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFLKTLTGKTITLEVESSDTIDDVKTKI 106

Query: 117 -------------FCTGMKLKDCKTLACYGVK 135
                           G +L+D +TL+ Y ++
Sbjct: 107 QDKEGIPPDQQRWIFAGKQLEDGRTLSDYNIQ 138



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 163 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 214

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 215 KESTLHLVL 223


>gi|327276048|ref|XP_003222783.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Anolis
          carolinensis]
          Length = 77

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + EKEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEPSDTIENVKAKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|290995512|ref|XP_002680339.1| polyubiquitin [Naegleria gruberi]
 gi|284093959|gb|EFC47595.1| polyubiquitin [Naegleria gruberi]
          Length = 152

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 80/146 (54%), Gaps = 12/146 (8%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLI-DYEDMALASPNVK 60
           +T+TL VE +++I+N+K   H+KEG   D Q L FAG +L +GR I DY        N++
Sbjct: 11  RTITLEVESNDSIENVKRKAHDKEGILPDQQRLIFAGKQLEDGRTINDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVK--IFVKMLTEEIVKLKVKVLLTIRDLFC 118
           ++ST+ L++  I  + + VK  +   + ++++    V+ + ++I   K  +    + L  
Sbjct: 63  KDSTLHLVWRLIGGMQLFVKTLTGKTITIEMESNATVENMKQKIFD-KEGIPSDQQRLIY 121

Query: 119 TGMKLKDCKTLACYGVKDDRGVACFI 144
            G +L+D +T+  Y ++ D  V   +
Sbjct: 122 AGKQLEDGRTIGDYNLQKDSTVHLVL 147


>gi|183013800|gb|ACC38419.1| ubiquitin [Plutella xylostella]
          Length = 76

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 9/70 (12%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE ++TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEPADTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLFC 70
          +EST+ L+F 
Sbjct: 63 KESTLHLVFS 72


>gi|70934446|ref|XP_738448.1| ubiquitin/ribosomal fusion protein Uba52 [Plasmodium chabaudi
          chabaudi]
 gi|56514677|emb|CAH75434.1| ubiquitin/ribosomal fusion protein uba52 homologue, putative
          [Plasmodium chabaudi chabaudi]
          Length = 76

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 9/72 (12%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLFCAI 72
          +EST+ L+   I
Sbjct: 63 KESTLHLVIYLI 74


>gi|383807048|ref|ZP_09962609.1| hypothetical protein IMCC13023_05710 [Candidatus Aquiluna sp.
          IMCC13023]
 gi|383299478|gb|EIC92092.1| hypothetical protein IMCC13023_05710 [Candidatus Aquiluna sp.
          IMCC13023]
          Length = 244

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 18/93 (19%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          +T+TL VE S+++ N+K  + +KEG + D Q L FAG  L +GR L DY        N++
Sbjct: 11 RTITLEVEPSDSVDNVKAKIQDKEGIAPDQQSLIFAGKALEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLL---------FCAIKVLSISVKAPSD 84
          +EST+ L+         +   + LS+S  AP++
Sbjct: 63 KESTLHLVLKISSVARPYVGPRSLSVSKSAPAN 95


>gi|27734327|gb|AAM51192.1| polyubiquitin [Reticulomyxa filosa]
 gi|27734331|gb|AAM51194.1| polyubiquitin [Haynesina germanica]
 gi|82568438|dbj|BAE48509.1| polyubiquitin [Planoglabratella opercularis]
          Length = 98

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 30/119 (25%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE ++TI+N+K  + +KEG   + Q L FAG +L +GR L DY        N++
Sbjct: 4   KTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDY--------NIQ 55

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK---VKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L                  +L+L+   ++IFVK LT + + L V+   TI+++
Sbjct: 56  KESTLHL------------------VLRLRGGAMQIFVKTLTGKTITLDVEPNDTIQNV 96


>gi|66804955|ref|XP_636210.1| hypothetical protein DDB_G0289449 [Dictyostelium discoideum AX4]
 gi|302595960|sp|P0CG78.1|UBIQF_DICDI RecName: Full=Polyubiquitin-F; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|167947|gb|AAA33267.1| ubiquitin [Dictyostelium discoideum]
 gi|60464567|gb|EAL62704.1| hypothetical protein DDB_G0289449 [Dictyostelium discoideum AX4]
          Length = 533

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 11  KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVK-------VLLT 112
           EST+ L                  +L+L+  ++IFVK LT + + L+V+       V   
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAK 105

Query: 113 IRD----------LFCTGMKLKDCKTLACYGVKDD 137
           I+D          L   G +L+D +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140



 Score = 58.5 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 163 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVK-------VLLT 112
           EST+ L                  +L+L+  ++IFVK LT + + L+V+       V   
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAK 257

Query: 113 IRD----------LFCTGMKLKDCKTLACYGVKDD 137
           I+D          L   G +L+D +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292



 Score = 58.5 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 315 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVK-------VLLT 112
           EST+ L                  +L+L+  ++IFVK LT + + L+V+       V   
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAK 409

Query: 113 IRD----------LFCTGMKLKDCKTLACYGVKDD 137
           I+D          L   G +L+D +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444



 Score = 52.4 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+ I+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 467 KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 519

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 520 ESTLHLVL 527


>gi|158148903|dbj|BAF81986.1| polyubiquitin [Glehnia littoralis]
          Length = 141

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 23/112 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL VE S+TI N+K    +KEG   D Q L FAG +L  GR        LA  N+++
Sbjct: 35  KTITLEVESSDTIDNVKAKTQDKEGIPPDQQWLIFAGKQLEAGR-------TLADYNIQK 87

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           EST+ L+                  L+  ++IFVK LT + + L+V+   TI
Sbjct: 88  ESTLHLVLR----------------LRGGMQIFVKTLTGKTITLEVESSDTI 123


>gi|145524134|ref|XP_001447897.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415425|emb|CAK80500.1| unnamed protein product [Paramecium tetraurelia]
          Length = 358

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 26/142 (18%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 60  KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 111

Query: 61  RESTMQLLFCAIKVLSISVK-------APSDDILKLKVKIFVKMLTEEIVKLKVKVLLTI 113
           +EST+ L+      + ++ K        PSD I  +K KI          + K  +    
Sbjct: 112 KESTLHLVLRLRGGILLTWKNHAALDVEPSDTIDAVKAKI----------QDKEGIPPDQ 161

Query: 114 RDLFCTGMKLKDCKTLACYGVK 135
           + L   G +L+D +TL+ Y ++
Sbjct: 162 QRLIFAGKQLEDGRTLSDYNIQ 183



 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 29/110 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI  +K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 208 KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 259

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVK 108
           +EST+ L                  +L+L+  + IFV + T  I+ + VK
Sbjct: 260 KESTLHL------------------VLRLRGGIMIFVSIFTSFILYIHVK 291



 Score = 43.5 bits (101), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 46/135 (34%)

Query: 21  VHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQLLFCAIKVLSISV 79
           + +KEG   D Q L FAG +L +GR L DY        N+++EST+ L            
Sbjct: 3   IQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKESTLHL------------ 42

Query: 80  KAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTI-----------------RDLFCTG 120
                 +L+L+  ++IFVK LT + + L V+   TI                 + L   G
Sbjct: 43  ------VLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAG 96

Query: 121 MKLKDCKTLACYGVK 135
            +L+D +TL+ Y ++
Sbjct: 97  KQLEDGRTLSDYNIQ 111


>gi|197725012|pdb|2ZNV|B Chain B, Crystal Structure Of Human Amsh-Lp Dub Domain In Complex
          With Lys63-Linked Ubiquitin Dimer
 gi|197725015|pdb|2ZNV|E Chain E, Crystal Structure Of Human Amsh-Lp Dub Domain In Complex
          With Lys63-Linked Ubiquitin Dimer
 gi|254574782|pdb|3A1Q|B Chain B, Crystal Structure Of The Mouse Rap80 Uims In Complex
          With Lys63-Linked Di-Ubiquitin
 gi|254574785|pdb|3A1Q|E Chain E, Crystal Structure Of The Mouse Rap80 Uims In Complex
          With Lys63-Linked Di-Ubiquitin
 gi|259090227|pdb|3H7P|A Chain A, Crystal Structure Of K63-Linked Di-Ubiquitin
 gi|262118711|pdb|3JSV|A Chain A, Crystal Structure Of Mouse Nemo Cozi In Complex With
          Lys63- Linked Di-Ubiquitin
 gi|270346451|pdb|3A9J|A Chain A, Crystal Structure Of The Mouse Tab2-Nzf In Complex With
          Lys63-Linked Di-Ubiquitin
 gi|270346454|pdb|3A9K|A Chain A, Crystal Structure Of The Mouse Tab3-Nzf In Complex With
          Lys63-Linked Di-Ubiquitin
 gi|71040793|gb|AAZ20310.1| ubiquitin [Musca domestica]
          Length = 76

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          REST+ L+ 
Sbjct: 63 RESTLHLVL 71


>gi|116263802|gb|ABJ91202.1| ubiquitin K63R [synthetic construct]
          Length = 76

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
          KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N++R
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQR 63

Query: 62 ESTMQLLF 69
          EST+ L+ 
Sbjct: 64 ESTLHLVL 71


>gi|345784346|ref|XP_852338.2| PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Canis lupus
          familiaris]
          Length = 74

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNG-RLIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+KG + EKEG   D Q L FAG +L +G  L DY        N++
Sbjct: 11 KTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGCTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|134105063|pdb|2O6V|B Chain B, Crystal Structure And Solution Nmr Studies Of
          Lys48-Linked Tetraubiquitin At Neutral Ph
 gi|134105067|pdb|2O6V|F Chain F, Crystal Structure And Solution Nmr Studies Of
          Lys48-Linked Tetraubiquitin At Neutral Ph
          Length = 76

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGXQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          REST+ L+ 
Sbjct: 63 RESTLHLVL 71


>gi|449479671|ref|XP_004155670.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-40S ribosomal protein
          S27a-like [Cucumis sativus]
          Length = 228

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 7/83 (8%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
          KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62 ESTMQLLFCAIKVLSISVKAPSD 84
          EST+ L+      + I VK  +D
Sbjct: 64 ESTLHLVLRLRGGMQIFVKTLTD 86


>gi|340959957|gb|EGS21138.1| putative ribosomal protein [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 720

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 603 KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 654

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 655 KESTLHLVL 663


>gi|312077797|ref|XP_003141460.1| ubiquitin/ribosomal fusion protein [Loa loa]
          Length = 702

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 536 KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 587

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 588 KESTLHLVL 596


>gi|331229396|ref|XP_003327364.1| ubiquitin-60S ribosomal protein L40 fusion protein [Puccinia
           graminis f. sp. tritici CRL 75-36-700-3]
 gi|309306354|gb|EFP82945.1| large subunit ribosomal protein L40e [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
          Length = 204

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 87  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY--------NIQ 138

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 139 KESTLHLVL 147


>gi|302393716|sp|P46575.2|RL40_EIMBO RecName: Full=Ubiquitin-60S ribosomal protein L40; AltName:
          Full=Ubiquitin A-52 residue ribosomal protein fusion
          product 1; Contains: RecName: Full=Ubiquitin; Contains:
          RecName: Full=60S ribosomal protein L40; AltName:
          Full=CEP52; AltName: Full=CEP53; Flags: Precursor
          Length = 129

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|148688761|gb|EDL20708.1| mCG1048340 [Mus musculus]
          Length = 91

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 25/105 (23%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKL 105
           +EST+ L+                  L+  ++IFVK LT + + L
Sbjct: 63  KESTLHLVLR----------------LRGGMQIFVKTLTGKTITL 91


>gi|134105065|pdb|2O6V|D Chain D, Crystal Structure And Solution Nmr Studies Of
          Lys48-Linked Tetraubiquitin At Neutral Ph
 gi|134105069|pdb|2O6V|H Chain H, Crystal Structure And Solution Nmr Studies Of
          Lys48-Linked Tetraubiquitin At Neutral Ph
          Length = 76

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGRQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          REST+ L+ 
Sbjct: 63 RESTLHLVL 71


>gi|208435645|pdb|3DVG|Y Chain Y, Crystal Structure Of K63-Specific Fab Apu.3a8 Bound To
          K63-Linked Di- Ubiquitin
 gi|208435649|pdb|3DVN|Y Chain Y, Crystal Structure Of K63-specific Fab Apu2.16 Bound To
          K63-linked Di- Ubiquitin
 gi|208435653|pdb|3DVN|V Chain V, Crystal Structure Of K63-specific Fab Apu2.16 Bound To
          K63-linked Di- Ubiquitin
          Length = 79

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 14 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 65

Query: 61 RESTMQLLF 69
          REST+ L+ 
Sbjct: 66 RESTLHLVL 74


>gi|452113248|gb|AGG08881.1| ubiquitin, partial [Rana clamitans]
          Length = 126

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 42/145 (28%)

Query: 9   EKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQL 67
           E S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N+++EST+ L
Sbjct: 1   EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKESTLHL 52

Query: 68  LFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD------------ 115
           +                  L+  ++IFVK LT + + L+V+   TI +            
Sbjct: 53  VLR----------------LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 96

Query: 116 -----LFCTGMKLKDCKTLACYGVK 135
                L   G +L+D +TL+ Y ++
Sbjct: 97  PNQQRLIFAGKQLEDGRTLSDYNIQ 121



 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 9/65 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI+N+K  + +KEG   + Q L FAG +L +GR L DY        N++
Sbjct: 70  KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY--------NIQ 121

Query: 61  RESTM 65
           +EST+
Sbjct: 122 KESTL 126


>gi|148698174|gb|EDL30121.1| mCG16273 [Mus musculus]
          Length = 118

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 9/70 (12%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K    +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEPSDTIENVKAKTQDKEGLPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLFC 70
          REST+ L+  
Sbjct: 63 RESTLHLVLS 72


>gi|154346116|ref|XP_001568995.1| putative polyubiquitin [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134066337|emb|CAM44128.1| putative polyubiquitin [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 992

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        L+  N+++
Sbjct: 467 KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKE 596



 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        L+  N+++
Sbjct: 163 KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKE 292



 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        L+  N+++
Sbjct: 619 KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLSDYNIQK 671

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 672 ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAK 713

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TL+ Y ++ +
Sbjct: 714 IQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKE 748



 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        L+  N+++
Sbjct: 771 KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLSDYNIQK 823

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 824 ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAK 865

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TL+ Y ++ +
Sbjct: 866 IQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKE 900



 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        L+  N+++
Sbjct: 11  KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKE 140



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        L+  N+++
Sbjct: 315 KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKE 444



 Score = 52.0 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        L+  N+++
Sbjct: 923 KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLSDYNIQK 975

Query: 62  ESTMQLLF 69
           EST+ L+ 
Sbjct: 976 ESTLHLVL 983


>gi|154339611|ref|XP_001562497.1| polyubiquitin, putative [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134063080|emb|CAM39530.1| polyubiquitin, putative [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 1068

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        L+  N+++
Sbjct: 163 KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLSDYNIQK 215

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 216 ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAK 257

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TL+ Y ++ +
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKE 292



 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        L+  N+++
Sbjct: 315 KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLSDYNIQK 367

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 368 ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAK 409

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TL+ Y ++ +
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKE 444



 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        L+  N+++
Sbjct: 467 KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLSDYNIQK 519

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 520 ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAK 561

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TL+ Y ++ +
Sbjct: 562 IQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKE 596



 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        L+  N+++
Sbjct: 771 KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLSDYNIQK 823

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 824 ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAK 865

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TL+ Y ++ +
Sbjct: 866 IQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKE 900



 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        L+  N+++
Sbjct: 11  KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLSDYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 64  ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAK 105

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TL+ Y ++ +
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKE 140



 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        L+  N+++
Sbjct: 619 KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLSDYNIQK 671

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
           EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 672 ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAK 713

Query: 116 -------------LFCTGMKLKDCKTLACYGVKDD 137
                        L   G +L++ +TL+ Y ++ +
Sbjct: 714 IQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKE 748



 Score = 57.0 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 44/155 (28%)

Query: 2    KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
            KT+ L VE S+TI+N+K  + +KEG   D Q L FAG +L  GR        L+  N+++
Sbjct: 923  KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGR-------TLSDYNIQK 975

Query: 62   ESTMQLLFCAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD---- 115
            EST+ L                  +L+L+  ++IFVK LT + + L+V+   TI +    
Sbjct: 976  ESTLHL------------------VLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAK 1017

Query: 116  -------------LFCTGMKLKDCKTLACYGVKDD 137
                         L   G +L++ +TL+ Y ++ +
Sbjct: 1018 IQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKE 1052


>gi|209730830|gb|ACI66284.1| Ubiquitin [Salmo salar]
          Length = 127

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        NV+
Sbjct: 11 KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NVQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|237838205|ref|XP_002368400.1| ubiquitin / ribosomal protein CEP52 fusion protein, putative
          [Toxoplasma gondii ME49]
 gi|401402053|ref|XP_003881158.1| putative ubiquitin / ribosomal protein CEP52 fusion protein
          [Neospora caninum Liverpool]
 gi|211966064|gb|EEB01260.1| ubiquitin / ribosomal protein CEP52 fusion protein, putative
          [Toxoplasma gondii ME49]
 gi|221484327|gb|EEE22623.1| ubiquitin / ribosomal protein CEP52 fusion protein, putative
          [Toxoplasma gondii GT1]
 gi|221505694|gb|EEE31339.1| ubiquitin / ribosomal protein CEP52 fusion protein, putative
          [Toxoplasma gondii VEG]
 gi|314998875|gb|ADT65351.1| 10 kDa excretory-secretory antigen [Toxoplasma gondii]
 gi|325115570|emb|CBZ51125.1| putative ubiquitin / ribosomal protein CEP52 fusion protein
          [Neospora caninum Liverpool]
          Length = 129

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|83317838|ref|XP_731337.1| ubiquitin [Plasmodium yoelii yoelii 17XNL]
 gi|23491342|gb|EAA22902.1| ubiquitin [Plasmodium yoelii yoelii]
          Length = 162

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 7/71 (9%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        L+  N+++
Sbjct: 46  KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLSDYNIQK 98

Query: 62  ESTMQLLFCAI 72
           EST+ L+   I
Sbjct: 99  ESTLHLVIYLI 109


>gi|164510086|emb|CAJ32647.1| ubiquitin [Chorocaris chacei]
          Length = 76

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 9/70 (12%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLFC 70
          +EST+ L+  
Sbjct: 63 KESTLHLVLS 72


>gi|27734381|gb|AAM51219.1| polyubiquitin [Cercomonas sp. ATCC 50318]
          Length = 99

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 29/111 (26%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S++I+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 4   KTITLDVESSDSIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 56

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLK----VKIFVKMLTEEIVKLKVK 108
           EST+ L                  +L+L+    ++IFVK LT + + L V+
Sbjct: 57  ESTLHL------------------VLRLRGGSGMQIFVKTLTGKTITLDVE 89


>gi|157783445|gb|ABV72530.1| ubiquitin [Heterocapsa triquetra]
          Length = 216

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|13021896|gb|AAK11574.1| humanized ubiquitin/L1 delta/H-2 Db CTL epitope hybrid protein
          [synthetic construct]
          Length = 558

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|11528469|gb|AAG37291.1| humanized L1/ubiqutin hybrid protein [synthetic construct]
          Length = 575

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|403300123|ref|XP_003940807.1| PREDICTED: uncharacterized protein LOC101032377 [Saimiri
          boliviensis boliviensis]
          Length = 458

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|290760504|gb|ADD59804.1| polyubiquitin, partial [Cercozoa sp. CC-2009e]
          Length = 97

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 21/104 (20%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGRLIDYEDMALASPNVKR 61
           KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR        LA  N+++
Sbjct: 11  KTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR-------TLADYNIQK 63

Query: 62  ESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKL 105
           EST+ L+        + ++  S       ++IFVK LT + + L
Sbjct: 64  ESTLHLV--------LRLRGGSG------MQIFVKTLTGKTITL 93


>gi|405113128|gb|AFR90239.1| ubiquitin-L40e ribosomal fusion protein [Sterkiella nova]
          Length = 134

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|238486284|ref|XP_002374380.1| ubiquitin-60S ribosomal protein L40 fusion protein [Aspergillus
          flavus NRRL3357]
 gi|220699259|gb|EED55598.1| ubiquitin UbiA, putative [Aspergillus flavus NRRL3357]
          Length = 156

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 39 KTITLDVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 90

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 91 KESTLHLVL 99


>gi|403371844|gb|EJY85807.1| Ubiquitin [Oxytricha trifallax]
          Length = 134

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|339232958|ref|XP_003381596.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979574|gb|EFV62350.1| ubiquitin family protein [Trichinella spiralis]
          Length = 152

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 42/143 (29%)

Query: 11  SETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQLLF 69
           S+TI+N+KG + +KEG   D Q L FAG +L +GR L DY        N+++EST+ L+ 
Sbjct: 14  SDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKESTLHLVL 65

Query: 70  CAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKLKVKVLLTIRD-------------- 115
                            L+  ++IFVK LT + + L+V+   T+ +              
Sbjct: 66  R----------------LRGGMQIFVKTLTGKTITLEVEPSDTVENVKGKIQDKEGIPPD 109

Query: 116 ---LFCTGMKLKDCKTLACYGVK 135
              L   G +L+D +TL+ Y ++
Sbjct: 110 QQRLIFAGKQLEDSRTLSDYNIQ 132



 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+T++N+KG + +KEG   D Q L FAG +L + R L DY        N++
Sbjct: 81  KTITLEVEPSDTVENVKGKIQDKEGIPPDQQRLIFAGKQLEDSRTLSDY--------NIQ 132

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 133 KESTLHLVL 141


>gi|158187894|gb|ABW23236.1| ribosomal protein rpl40 [Eurythoe complanata]
          Length = 128

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|303287967|ref|XP_003063272.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455104|gb|EEH52408.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 205

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|124514026|ref|XP_001350369.1| 60S ribosomal protein L40/UBI, putative [Plasmodium falciparum
          3D7]
 gi|23615786|emb|CAD52778.1| 60S ribosomal protein L40/UBI, putative [Plasmodium falciparum
          3D7]
          Length = 128

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|323208|gb|AAA42855.1| nonstructural protein; putative helicase/protease; contains
            duplication; contains ubiquitin-coding region; putative,
            partial [Bovine viral diarrhea virus 1]
          Length = 1896

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2    KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
            KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 1000 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 1051

Query: 61   RESTMQLLF 69
            +EST+ L+ 
Sbjct: 1052 KESTLHLVL 1060



 Score = 49.7 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 47/147 (31%)

Query: 12   ETIKNLKGMVHE-KEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVKRESTMQLLF 69
            E ++  KG VH+ KEG   D Q L FAG +L +GR L DY        N+++EST+ L  
Sbjct: 933  ENVEAAKGYVHQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQKESTLHL-- 982

Query: 70   CAIKVLSISVKAPSDDILKLK--VKIFVKMLTEEIVKLKVKVLLTIRD------------ 115
                            +L+L+  ++IFVK LT + + L+V+   TI +            
Sbjct: 983  ----------------VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 1026

Query: 116  -----LFCTGMKLKDCKTLACYGVKDD 137
                 L   G +L+D +TL+ Y ++ +
Sbjct: 1027 PDQQRLIFAGKQLEDGRTLSDYNIQKE 1053


>gi|317145132|ref|XP_001820063.2| ubiquitin-60S ribosomal protein L40 fusion protein [Aspergillus
           oryzae RIB40]
          Length = 166

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 49  KTITLDVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 100

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 101 KESTLHLVL 109


>gi|116204187|ref|XP_001227904.1| ubiquitin [Chaetomium globosum CBS 148.51]
 gi|88176105|gb|EAQ83573.1| ubiquitin [Chaetomium globosum CBS 148.51]
          Length = 91

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 13/87 (14%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQL---LFCAIKVLSI-SVKAPS 83
          +EST+ L   L  A+  LS+ +  AP+
Sbjct: 63 KESTLHLVLRLRGAMARLSVFAASAPT 89


>gi|39725569|dbj|BAD04937.1| poryprotein [Bovine viral diarrhea virus 190cp]
          Length = 3020

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2    KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
            KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 1956 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 2007

Query: 61   RESTMQLLF 69
            +EST+ L+ 
Sbjct: 2008 KESTLHLVL 2016


>gi|79677318|emb|CAI77927.1| polyubiquitine protein [Bathysiphon sp. 3980]
 gi|79677325|emb|CAI77928.1| polyubiquitine protein [Bathysiphon sp. 3980]
          Length = 113

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 30/119 (25%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE ++TI+N+K  + +KEG   + Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVKAPSDDILKLK---VKIFVKMLTEEIVKLKVKVLLTIRDL 116
           +EST+ L                  +L+L+   ++IFVK LT + + L V+   TI+++
Sbjct: 63  KESTLHL------------------VLRLRGGTMQIFVKTLTGKTITLDVEPNDTIQNV 103


>gi|66362872|ref|XP_628402.1| 60S ribosomal protein L40 [Cryptosporidium parvum Iowa II]
 gi|46229800|gb|EAK90618.1| 60S ribosomal protein L40 [Cryptosporidium parvum Iowa II]
          Length = 132

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 15 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 66

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 67 KESTLHLVL 75


>gi|339233028|ref|XP_003381631.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979531|gb|EFV62315.1| ubiquitin family protein [Trichinella spiralis]
          Length = 203

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 58/185 (31%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLM-----------NGRLI--- 47
           KT+TL VE S+TI+N+K  + +KEG   D Q L FAG++ +             RLI   
Sbjct: 34  KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGNKEITILDKEGIPPDQQRLIFAG 93

Query: 48  -DYED-MALASPNVKRESTMQLLFCAIKVLSISVKAPSDDILKLKVKIFVKMLTEEIVKL 105
              ED   L+  N+++EST+ L+                  L+  ++IFVK LT + + L
Sbjct: 94  KQLEDGRTLSDYNIQKESTLHLVLR----------------LRGGMQIFVKTLTGKTITL 137

Query: 106 KVKVLLTIRD-----------------LFCTGMKLKDCKTLACYGVKDD---------RG 139
           +V+   TI +                 L   G +L+D +TL+ Y ++ +         RG
Sbjct: 138 EVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 197

Query: 140 VACFI 144
           V  FI
Sbjct: 198 VCKFI 202


>gi|293347747|ref|XP_002726691.1| PREDICTED: ubiquitin-40S ribosomal protein S27a [Rattus
          norvegicus]
 gi|149024482|gb|EDL80979.1| rCG63019 [Rattus norvegicus]
          Length = 143

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + ++EGT  D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLKVEPSDTIENVKAKIQDEEGTPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|66361226|pdb|1YX5|B Chain B, Solution Structure Of S5a Uim-1UBIQUITIN COMPLEX
 gi|66361228|pdb|1YX6|B Chain B, Solution Structure Of S5a Uim-2UBIQUITIN COMPLEX
          Length = 98

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|320168355|gb|EFW45254.1| ubiquitin/60S ribosomal protein L40 fusion [Capsaspora owczarzaki
          ATCC 30864]
          Length = 128

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|164510088|emb|CAJ32648.1| ubiquitin [Chorocaris chacei]
          Length = 76

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|39725571|dbj|BAD04938.1| poryprotein [Bovine viral diarrhea virus T-20]
          Length = 2420

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2    KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
            KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 1474 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 1525

Query: 61   RESTMQLLF 69
            +EST+ L+ 
Sbjct: 1526 KESTLHLVL 1534


>gi|358372151|dbj|GAA88756.1| RNA polymerase I specific transcription initiation factor Rrn7
           [Aspergillus kawachii IFO 4308]
          Length = 605

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 488 KTITLDVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 539

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 540 KESTLHLVL 548


>gi|156083999|ref|XP_001609483.1| ubiquitin / ribosomal protein CEP52 [Babesia bovis T2Bo]
 gi|154796734|gb|EDO05915.1| ubiquitin / ribosomal protein CEP52 [Babesia bovis]
          Length = 131

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|115390965|ref|XP_001212987.1| 60S ribosomal protein L40 [Aspergillus terreus NIH2624]
 gi|114193911|gb|EAU35611.1| 60S ribosomal protein L40 [Aspergillus terreus NIH2624]
          Length = 422

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL+VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 305 KTITLDVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 356

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 357 KESTLHLVL 365


>gi|336365182|gb|EGN93533.1| hypothetical protein SERLA73DRAFT_63550 [Serpula lacrymans var.
          lacrymans S7.3]
          Length = 101

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 10/72 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQL-LFCA 71
          +EST+ L L CA
Sbjct: 63 KESTLHLVLRCA 74


>gi|67614873|ref|XP_667394.1| ubiquitin / ribosomal protein CEP52 [Cryptosporidium hominis
          TU502]
 gi|54658521|gb|EAL37158.1| ubiquitin / ribosomal protein CEP52 [Cryptosporidium hominis]
 gi|323510495|dbj|BAJ78141.1| cgd7_2280 [Cryptosporidium parvum]
          Length = 128

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|84997964|ref|XP_953703.1| ubiquitin/60S ribosomal fusion protein [Theileria annulata]
 gi|65304700|emb|CAI73025.1| ubiquitin/60S ribosomal fusion protein, putative [Theileria
          annulata]
          Length = 131

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|79677339|emb|CAI77901.1| polyubiquitine protein [Collozoum inerme]
          Length = 112

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 55/104 (52%), Gaps = 20/104 (19%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11  KTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61  RESTMQLLFCAIKVLSISVK-----------APSDDILKLKVKI 93
           +EST+ L+      + I VK            PSD I  +K KI
Sbjct: 63  KESTLHLVLRLRGGMQIFVKTLTGKTTTLEVEPSDTIDNVKAKI 106


>gi|302393730|sp|P33190.2|RL40_TETPY RecName: Full=Ubiquitin-60S ribosomal protein L40; Contains:
          RecName: Full=Ubiquitin; Contains: RecName: Full=60S
          ribosomal protein L40; AltName: Full=CEP52; AltName:
          Full=CEP53; Flags: Precursor
 gi|353678143|sp|P0DJ25.1|RL40_TETTS RecName: Full=Ubiquitin-60S ribosomal protein L40; Contains:
          RecName: Full=Ubiquitin; Contains: RecName: Full=60S
          ribosomal protein L40
 gi|358440120|pdb|4A18|K Chain K, T.Thermophila 60s Ribosomal Subunit In Complex With
          Initiation Factor 6. This File Contains 26s Rrna And
          Proteins Of Molecule 1
 gi|358440166|pdb|4A1B|K Chain K, T.Thermophila 60s Ribosomal Subunit In Complex With
          Initiation Factor 6. This File Contains 26s Rrna And
          Proteins Of Molecule 3.
 gi|358440212|pdb|4A1D|K Chain K, T.Thermophila 60s Ribosomal Subunit In Complex With
          Initiation Factor 6. This File Contains 26s Rrna And
          Proteins Of Molecule 4.
 gi|359807712|pdb|4A19|K Chain K, T.Thermophila 60s Ribosomal Subunit In Complex With
          Initiation Factor 6. This File Contains 26s Rrna And
          Proteins Of Molecule 2.
 gi|374977937|pdb|4ADX|5 Chain 5, The Cryo-Em Structure Of The Archaeal 50s Ribosomal
          Subunit In Complex With Initiation Factor 6
 gi|578552|emb|CAA40021.1| 53aa extension protein [Tetrahymena pyriformis]
 gi|228460|prf||1804335A ubiquitin extension protein
          Length = 129

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL+VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|449017230|dbj|BAM80632.1| ubiquitin with short C-terminal extension [Cyanidioschyzon
          merolae strain 10D]
          Length = 134

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 2  KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
          KT+TL VE S+TI+N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 11 KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--------NIQ 62

Query: 61 RESTMQLLF 69
          +EST+ L+ 
Sbjct: 63 KESTLHLVL 71


>gi|1076678|pir||S42643 ubiquitin / ribosomal protein S27a - potato (fragment)
          Length = 126

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 2   KTVTLNVEKSETIKNLKGMVHEKEGTSEDIQDLFFAGDRLMNGR-LIDYEDMALASPNVK 60
           KT+TL VE S+TI N+K  + +KEG   D Q L FAG +L +GR L DY        N++
Sbjct: 56  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY--------NIQ 107

Query: 61  RESTMQLLF 69
           +EST+ L+ 
Sbjct: 108 KESTLHLVL 116


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.138    0.389 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,949,957,719
Number of Sequences: 23463169
Number of extensions: 67095401
Number of successful extensions: 157616
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2373
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 151836
Number of HSP's gapped (non-prelim): 4188
length of query: 148
length of database: 8,064,228,071
effective HSP length: 111
effective length of query: 37
effective length of database: 9,754,783,608
effective search space: 360926993496
effective search space used: 360926993496
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 71 (32.0 bits)