BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041427
(158 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 90/143 (62%), Gaps = 10/143 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFKDDETLDRGNEISSELSKAIEESNVSIV 79
YDVFLSFRGEDTR FT HL+ L G F+DD+ L+ G I EL KAIEES +IV
Sbjct: 12 YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIV 71
Query: 80 ILSKNYASSPWCLDELAKIVECGNKRNDRKVFAVFYGVDPTD---------RVFAKYEEE 130
+ S+NYA+S WCL+EL KI+EC R + V +FY VDP+ + F ++E +
Sbjct: 72 VFSENYATSRWCLNELVKIMEC-KTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETK 130
Query: 131 FKENHEKVLKWRAALTRVASLAG 153
+K++ E + +WR AL A+L G
Sbjct: 131 YKDDVEGIQRWRIALNEAANLKG 153
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 9/147 (6%)
Query: 19 KYDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFKDDETLDRGNEISSELSKAIEESNVSI 78
+YDVF SFRGED RNNF HL G V F+DD + R + I EL AI ES +S+
Sbjct: 10 RYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDH-IKRSHTIGHELRAAIRESKISV 68
Query: 79 VILSKNYASSPWCLDELAKIVECGNKRNDRKVFAVFYGVDPTD--RVFAKYEEEFKE--- 133
V+ S+NYASS WCLDEL +I++C ++ KV VFY VDP+D + K+ F E
Sbjct: 69 VLFSENYASSSWCLDELIEIMKCKEEQG-LKVMPVFYKVDPSDIRKQTGKFGMSFLETCC 127
Query: 134 --NHEKVLKWRAALTRVASLAGWHLQN 158
E+ WR ALT A++ G H QN
Sbjct: 128 GKTEERQHNWRRALTDAANILGDHPQN 154
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 103 bits (257), Expect = 4e-22, Method: Composition-based stats.
Identities = 62/148 (41%), Positives = 87/148 (58%), Gaps = 14/148 (9%)
Query: 19 KYDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFKDDETLDRGNEISSELSKAIEESNVSI 78
+YDVF SFRGED R++F HL + +R + F DDE ++R I EL AI+ES ++I
Sbjct: 11 RYDVFPSFRGEDVRDSFLSHL-LKELRGKAITFIDDE-IERSRSIGPELLSAIKESRIAI 68
Query: 79 VILSKNYASSPWCLDELAKIVECGNKRNDRKVFAVFYGVDPTDRVFAKYEEEFKENHEKV 138
VI SKNYASS WCL+EL +I +C N + V +F+ VD ++ K EF + E+
Sbjct: 69 VIFSKNYASSTWCLNELVEIHKCYTNLN-QMVIPIFFHVDASE--VKKQTGEFGKVFEET 125
Query: 139 LK---------WRAALTRVASLAGWHLQ 157
K W+ AL VA +AG+ L+
Sbjct: 126 CKAKSEDEKQSWKQALAAVAVMAGYDLR 153
>sp|Q9FHE9|P2A08_ARATH Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8
PE=2 SV=1
Length = 354
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 84/159 (52%), Gaps = 14/159 (8%)
Query: 8 SSSTHHQILQTKYDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFKD-DETLDRGNEISSE 66
++S+ + T VF++FRG+D RN F L A+ F D DE + G ++ +
Sbjct: 2 AASSSVRPTPTGPQVFINFRGKDLRNGFLSFLEPAMREANINVFIDKDEVV--GTDLVN- 58
Query: 67 LSKAIEESNVSIVILSKNYASSPWCLDELAKIVECGNKRNDRKVFAVFYGVDPTDRV--- 123
L I+ES V++VI SK+Y SS WCLDELA+I +C N + +FY + P+ +
Sbjct: 59 LFVRIQESRVAVVIFSKDYTSSEWCLDELAEIKDCIN-QGGLNAIPIFYKLAPSSVLELK 117
Query: 124 ------FAKYEEEFKENHEKVLKWRAALTRVASLAGWHL 156
F +E++K + E+ KW+ AL + L G L
Sbjct: 118 GGFGDTFRVLKEKYKNDPERTQKWQEALESIPKLKGLRL 156
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 12/159 (7%)
Query: 4 SHTSSSSTHHQILQTKYDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFKDDETLDRGNEI 63
S+ +SS+ H I +Y VF++FRG++ RN+F L A+ F D+ L RG +
Sbjct: 342 SNAASSTDDHGITLPQYQVFINFRGDELRNSFVGFLVKAMRLEKINVFTDEVEL-RGTNL 400
Query: 64 SSELSKAIEESNVSIVILSKNYASSPWCLDELAKIVECGNKRNDRKVFAVFYGVDPT--D 121
+ L + IEES V++ I S+ Y S WCLDEL K+ E ++ V VFY ++ T
Sbjct: 401 NY-LFRRIEESRVAVAIFSERYTESCWCLDELVKMKE-QMEQGKLVVVPVFYRLNATACK 458
Query: 122 RVFAKY-------EEEFKENHEKVLKWRAALTRVASLAG 153
R + E E++ E++ KW+ AL+ V S G
Sbjct: 459 RFMGAFGDNLRNLEWEYRSEPERIQKWKEALSSVFSNIG 497
>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5
PE=2 SV=1
Length = 411
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 14/147 (9%)
Query: 15 ILQTKYDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFKDDETLDRGNEISSELSKAIEES 74
++ T VF++FRG+D R F L AL + F D++ +RG + S L I ES
Sbjct: 17 LIPTGPQVFINFRGKDLRKGFMSFLKPALKKEKINVFIDEQE-ERGKYLIS-LFDTIGES 74
Query: 75 NVSIVILSKNYASSPWCLDELAKIVECGNKRNDRKVFAVFYGVDPTDRV----------F 124
+++VI S+ Y S WC+DEL KI E + +N + +FY +D D V F
Sbjct: 75 KIALVIFSEGYCESHWCMDELVKIKEYMD-QNRLIIIPIFYRLD-LDVVKDLTGKFGDNF 132
Query: 125 AKYEEEFKENHEKVLKWRAALTRVASL 151
++++ +K+ KW AL V L
Sbjct: 133 WDLVDKYQPEPKKLHKWTEALFSVCEL 159
>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6
PE=2 SV=1
Length = 392
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 7 SSSSTHHQILQTKYDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFKDDETLDRGNEISSE 66
+SSS+ + T VF+ FRG D R +F L AL F D+ G+E+++
Sbjct: 2 ASSSSVVKPTPTGPQVFICFRGADVRKHFISFLVPALREANINVFIDENEF-LGSEMANL 60
Query: 67 LSKAIEESNVSIVILSKNYASSPWCLDELAKIVECGNKRNDRK---VFAVFYGVDPTDRV 123
L++ IEES +++VI S ++ S CL+ELAKI E R D+ V +FY V P+
Sbjct: 61 LTR-IEESELALVIFSVDFTRSHRCLNELAKIKE----RKDQGRLIVIPIFYKVKPSAVK 115
Query: 124 F--AKYEEEFK---ENHEKVL----KWRAALTRVASLAGWHL 156
F K+ + F+ N+ +L KW+ AL + G L
Sbjct: 116 FLEGKFGDNFRALERNNRHMLPITQKWKEALESIPGSIGMPL 157
>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana
GN=WRKY19 PE=2 SV=1
Length = 1895
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 22/142 (15%)
Query: 20 YDVFLSFRGEDTRN-NFTDHLHVALIRNGFVAFKDDETLDRGNEISSELSKAIEESNVSI 78
YDV + + D N +F HL +L R G + ++ NE+ A+ + V I
Sbjct: 668 YDVVIRYGRADISNEDFISHLRASLCRRGISVY------EKFNEVD-----ALPKCRVLI 716
Query: 79 VILSKNYASSPWCLDELAKIVECGNKRNDRKVFAVFYGVDPTDRVF--AKYEEEFKENHE 136
++L+ Y S L I+E DR V+ +FY + P D V YE + ++
Sbjct: 717 IVLTSTYVPS-----NLLNILE-HQHTEDRVVYPIFYRLSPYDFVCNSKNYERFYLQDEP 770
Query: 137 KVLKWRAALTRVASLAGWHLQN 158
K KW+AAL + + G+ L +
Sbjct: 771 K--KWQAALKEITQMPGYTLTD 790
>sp|Q9FL92|WRK16_ARATH Probable WRKY transcription factor 16 OS=Arabidopsis thaliana
GN=WRKY16 PE=2 SV=1
Length = 1372
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 29 EDTRNNFTDHLHVALIRNGFVAFKDDETLDRGNEISSELSKAIEESNVSIVILSKNYASS 88
E+ R +F HL AL R G +D +D + +S+E +E + VS++IL N S
Sbjct: 14 EEVRYSFVSHLSKALQRKGV----NDVFIDSDDSLSNESQSMVERARVSVMILPGNRTVS 69
Query: 89 PWCLDELAKIVECGNKRNDRKVFAVFYGV 117
LD+L K+++C K D+ V V YGV
Sbjct: 70 ---LDKLVKVLDC-QKNKDQVVVPVLYGV 94
>sp|Q9FH83|WRK52_ARATH Probable WRKY transcription factor 52 OS=Arabidopsis thaliana
GN=WRKY52 PE=2 SV=3
Length = 1288
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 29 EDTRNNFTDHLHVALIRNGFVAFKDDETLDRGNEISSELSKAIEESNVSIVILSKNYASS 88
E+ R +F HL AL R G D + + E IE++ VS+++L N S
Sbjct: 17 EEVRYSFVSHLSEALRRKGINNVVVDVD--IDDLLFKESQAKIEKAGVSVMVLPGNCDPS 74
Query: 89 PWCLDELAKIVECGNKRNDRKVFAVFYG 116
LD+ AK++EC D+ V +V YG
Sbjct: 75 EVWLDKFAKVLECQRNNKDQAVVSVLYG 102
>sp|Q9FKN7|DAR4_ARATH Protein DA1-related 4 OS=Arabidopsis thaliana GN=DAR4 PE=1 SV=2
Length = 1613
Score = 36.2 bits (82), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 29 EDTRNNFTDHLHVALIRNGFVAFKDDETLDRGNEISSELSKAIEE-SNVSIVILSKNYA- 86
E ++ HL AL R G F D L S + ++ + + + V +V++S
Sbjct: 26 ETVLHSLVSHLSAALRREGISVFVDACGLQETKFFSIKQNQPLTDGARVLVVVISDEVEF 85
Query: 87 SSPWCLDELAKIVECGNKRNDRKVFAVFYGVDPTDRVFA 125
PW + K+++ G + N V VFYGVD RV+
Sbjct: 86 YDPW-FPKFLKVIQ-GWQNNGHVVVPVFYGVDSLTRVYG 122
>sp|Q9JLZ8|SIGIR_MOUSE Single Ig IL-1-related receptor OS=Mus musculus GN=Sigirr PE=1 SV=2
Length = 409
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 10/103 (9%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALI--RNGFVAFKDDETLDRGNEISSELSKAIEESNVS 77
YD ++S+ F + + + R G+ F +D L E S++L +
Sbjct: 164 YDAYVSYSDCPEDRKFVNFILKPQLERRRGYKLFLEDRDLLPRAEPSADLLVNLSRCRRL 223
Query: 78 IVILSKNYASSPWC----LDELAKIVECGNKRNDRKVFAVFYG 116
IV+LS + S PWC + L +++E R +F F G
Sbjct: 224 IVVLSDAFLSRPWCSQSFREGLCRLLEL----TRRPIFITFEG 262
>sp|Q9QUN7|TLR2_MOUSE Toll-like receptor 2 OS=Mus musculus GN=Tlr2 PE=1 SV=1
Length = 784
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ +D+ ++ ++L V + N FK G I + +IE+S+
Sbjct: 641 YDAFVSYSEQDS--HWVENLMVQQLENSDPPFKLCLHKRDFVPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
++ +LS+N+ S WC EL
Sbjct: 699 TVFVLSENFVRSEWCKYEL 717
>sp|Q4V892|SIGIR_RAT Single Ig IL-1-related receptor OS=Rattus norvegicus GN=Sigirr PE=2
SV=1
Length = 409
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 10/103 (9%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALI--RNGFVAFKDDETLDRGNEISSELSKAIEESNVS 77
YD ++S+ F + + + R G+ F +D L E S++L +
Sbjct: 164 YDAYVSYSDRPEDRKFVNFILKPQLERRRGYKLFLEDRDLLPRAEPSADLLVNLSRCRRL 223
Query: 78 IVILSKNYASSPWC----LDELAKIVECGNKRNDRKVFAVFYG 116
IV+LS + PWC + L +++E R +F F G
Sbjct: 224 IVVLSDAFLRRPWCSQSFREGLCRLLEL----TRRPIFITFEG 262
>sp|A4FK76|IDI_SACEN Isopentenyl-diphosphate Delta-isomerase OS=Saccharopolyspora
erythraea (strain NRRL 23338) GN=idi PE=3 SV=1
Length = 194
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 48 FVAFKDDETLDRGNEISSELSKAIEESNVSIVILSKNYASSPWCLDELAKIVECGNKRND 107
F AF DDE E++ + + S S +L+ SPWC ++A++VE G
Sbjct: 119 FAAFTDDEPAPNREEVAG--TAWADWSGFSAEVLAGTTDISPWCRQQVAELVELGANP-- 174
Query: 108 RKVFAVFYGVDPTD 121
A + DP D
Sbjct: 175 ----AEWPAADPAD 184
>sp|Q9R1F8|TLR2_CRIGR Toll-like receptor 2 OS=Cricetulus griseus GN=TLR2 PE=2 SV=2
Length = 784
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ +D+ + ++L V + N FK G I + +IE+S+
Sbjct: 641 YDAFVSYSEQDSY--WVENLMVQQLENSEPPFKLCLHKRDFVPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
++ +LS+N+ S WC EL
Sbjct: 699 TLFVLSENFVRSEWCKYEL 717
>sp|P22354|RM20_YEAST 54S ribosomal protein L20, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MRPL20 PE=1
SV=2
Length = 195
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 36 TDHLHVALIRNGFVAFKDDETLDRGNEISSELSKAIEESNVSI---VILSKNYASSPWCL 92
T ++ I F+A D RG ++ + +KA + NV + + K Y P +
Sbjct: 63 TGSVNSETIPRSFMAASDPR---RGLDMPVQSTKAKQCPNVLVGKSTVNGKTYHLGPQEI 119
Query: 93 DELAKIVECGNKRNDRKVFAVFYGVDPTDRVFAKYEEEFKENHEKVLKWR 142
DE+ K+ ++ RK A YG+ P +F + E H ++++ R
Sbjct: 120 DEIRKLRLDNPQKYTRKFLAAKYGISP---LFVSMVSKPSEQHVQIMESR 166
>sp|Q15399|TLR1_HUMAN Toll-like receptor 1 OS=Homo sapiens GN=TLR1 PE=1 SV=3
Length = 786
Score = 32.7 bits (73), Expect = 0.90, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 7/80 (8%)
Query: 19 KYDVFLSFRGEDT---RNNFTDHLHVALIRNGFVAFKDDETLDRGNEISSELSKAIEESN 75
++ F+S+ G D+ +N +L + G + G I + IE+S
Sbjct: 636 QFHAFISYSGHDSFWVKNELLPNLE----KEGMQICLHERNFVPGKSIVENIITCIEKSY 691
Query: 76 VSIVILSKNYASSPWCLDEL 95
SI +LS N+ S WC EL
Sbjct: 692 KSIFVLSPNFVQSEWCHYEL 711
>sp|A4J7I8|SFSA_DESRM Sugar fermentation stimulation protein homolog OS=Desulfotomaculum
reducens (strain MI-1) GN=sfsA PE=3 SV=1
Length = 239
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 14/96 (14%)
Query: 17 QTKYDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFKDDETLDRGNEISSELSKAIEESNV 76
++++D++L +GE R F + V L+ G F D + +RG++ SEL++A+ E
Sbjct: 123 ESRFDIYL--KGEAGRC-FIEVKSVTLVDEGVAKFPDAPS-ERGSKHLSELTRAVGEGYR 178
Query: 77 SIVI----------LSKNYASSPWCLDELAKIVECG 102
S VI S N + P L++ +E G
Sbjct: 179 SAVIFIIQRDDARSFSPNSITDPVFSQTLSQAIEAG 214
>sp|Q13478|IL18R_HUMAN Interleukin-18 receptor 1 OS=Homo sapiens GN=IL18R1 PE=1 SV=1
Length = 541
Score = 32.7 bits (73), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 16/134 (11%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALIRN-------GFVAFKDDETLDRGNEISSELSKAIE 72
YD F+S+ E N +H I G+ + + G + E+ IE
Sbjct: 375 YDAFVSYLKECRPENGEEHTFAVEILPRVLEKHFGYKLCIFERDVVPGGAVVDEIHSLIE 434
Query: 73 ESNVSIVILSKNYASSPWCLDELAKIVECG--NKRNDRKVFAVFYGVDP-TDRVFAKYEE 129
+S I++LSK+Y S +E+ +E G +RK+ + P TD F
Sbjct: 435 KSRRLIIVLSKSYMS-----NEVRYELESGLHEALVERKIKIILIEFTPVTDFTFLPQSL 489
Query: 130 EFKENHEKVLKWRA 143
+ ++H +VLKW+A
Sbjct: 490 KLLKSH-RVLKWKA 502
>sp|Q9DGB6|TLR22_CHICK Toll-like receptor 2 type-2 OS=Gallus gallus GN=TLR2-2 PE=2 SV=1
Length = 781
Score = 32.3 bits (72), Expect = 1.1, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D+ N+ +++ V + F+ G I + +IE+S+
Sbjct: 638 YDAFVSYSENDS--NWVENIMVQQLEQACPPFRLCLHKRDFVPGKWIVDNIIDSIEKSHK 695
Query: 77 SIVILSKNYASSPWCLDEL 95
++ +LS+++ S WC EL
Sbjct: 696 TLFVLSEHFVQSEWCKYEL 714
>sp|Q6IA17|SIGIR_HUMAN Single Ig IL-1-related receptor OS=Homo sapiens GN=SIGIRR PE=1 SV=3
Length = 410
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 10/103 (9%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALI--RNGFVAFKDDETLDRGNEISSELSKAIEESNVS 77
YD ++S+ F + + + R G+ F DD L E S++L +
Sbjct: 165 YDAYVSYSDCPEDRKFVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRL 224
Query: 78 IVILSKNYASSPWC----LDELAKIVECGNKRNDRKVFAVFYG 116
IV+LS + S WC + L +++E R +F F G
Sbjct: 225 IVVLSDAFLSRAWCSHSFREGLCRLLEL----TRRPIFITFEG 263
>sp|P08953|TOLL_DROME Protein toll OS=Drosophila melanogaster GN=Tl PE=1 SV=1
Length = 1097
Score = 32.0 bits (71), Expect = 1.6, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 10/128 (7%)
Query: 19 KYDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFK---DDETLDRGNEISSELSKAIEESN 75
K+D F+S+ +D +F + V + +G F+ + G I + +++ +S
Sbjct: 858 KFDAFISYSHKD--QSFIEDYLVPQLEHGPQKFQLCVHERDWLVGGHIPENIMRSVADSR 915
Query: 76 VSIVILSKNYASSPWCLDELAKIVECGNKRNDRKVFAVFYGVDPTDRVFAKYEEEFKE-- 133
+I++LS+N+ S W E ++ + Y D D K +EE K
Sbjct: 916 RTIIVLSQNFIKSEWARLEFRAAHRSALNEGRSRIIVIIYS-DIGD--VEKLDEELKAYL 972
Query: 134 NHEKVLKW 141
LKW
Sbjct: 973 KMNTYLKW 980
>sp|Q9BXR5|TLR10_HUMAN Toll-like receptor 10 OS=Homo sapiens GN=TLR10 PE=1 SV=2
Length = 811
Score = 31.6 bits (70), Expect = 1.9, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 57 LDRGNEISSELSKAIEESNVSIVILSKNYASSPWC 91
D G IS + IE+S SI +LS N+ + WC
Sbjct: 672 FDPGKSISENIVSFIEKSYKSIFVLSPNFVQNEWC 706
>sp|Q6A163|K1C39_HUMAN Keratin, type I cytoskeletal 39 OS=Homo sapiens GN=KRT39 PE=1 SV=2
Length = 491
Score = 31.6 bits (70), Expect = 1.9, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 68 SKAIEESNVSIVILSKNYASSPWCLDELAKIVECGNKRNDRKVFAVFYGVDPTDRVFAKY 127
SK EESN + +L +Y S ++EL + + C N R V + D + AKY
Sbjct: 126 SKIQEESNKELPVLCPDYLSYYTTIEELQQKILCTKAENSRLVSQIDNTKLTADDLRAKY 185
Query: 128 EEE 130
E E
Sbjct: 186 EAE 188
>sp|O61443|MK14B_DROME Mitogen-activated protein kinase 14B OS=Drosophila melanogaster
GN=p38b PE=1 SV=1
Length = 365
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 16/118 (13%)
Query: 36 TDHLHVALIRNGFVAFKDDETLDRGNEISSELSKAIEESNVSIVILSKNY-----ASSPW 90
TDH+H + + DE + R ISSE ++ S V+ +N+ ++P
Sbjct: 229 TDHIHQLNLIMEVLGTPADEFMSR---ISSESARNYIRS--LPVMPRRNFRDIFRGANPL 283
Query: 91 CLDELAKIVEC-GNKR-NDRKVFAVFYGV---DPTD-RVFAKYEEEFKENHEKVLKWR 142
+D L K++E +KR + A Y DPTD + A Y++ F+EN V KWR
Sbjct: 284 AIDLLEKMLELDADKRITAEQALAHPYMEKYHDPTDEQTAALYDQSFEENELPVEKWR 341
>sp|P38959|VPS41_YEAST Vacuolar protein sorting-associated protein 41 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS41 PE=1
SV=2
Length = 992
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 18/114 (15%)
Query: 26 FRG-EDTRNNFTDHLHVALIRNGFVAFKDDETLDRGNEISSELSKAIEESNVSIVILSKN 84
FRG D + H V+++ G +FKDD+ L G +I E I+E KN
Sbjct: 373 FRGTPDKKVELECHFTVSMLITGLASFKDDQLLCLGFDIDIEEEATIDEDMKE----GKN 428
Query: 85 YASSPWCLDELAKIVECGNKRNDRKVFAVFYGVDPTDRVFAKYEEEFKENHEKV 138
++ P L LAK GN + K+ +F G D ++ +E +N+EK+
Sbjct: 429 FSKRPENL--LAK----GNAP-ELKIVDLFNG----DEIYN--DEVIMKNYEKL 469
>sp|Q2PZH4|TLR2_BUBBU Toll-like receptor 2 OS=Bubalus bubalis GN=TLR2 PE=2 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ +D+ + ++L V + + FK G I + +IE+S+
Sbjct: 641 YDAFVSYSEQDSY--WVENLMVQELEHFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
+I +LS+N+ S WC EL
Sbjct: 699 TIFVLSENFVKSEWCKYEL 717
>sp|P58753|TIRAP_HUMAN Toll/interleukin-1 receptor domain-containing adapter protein
OS=Homo sapiens GN=TIRAP PE=1 SV=2
Length = 221
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 20 YDVFLSFRGED--TRNNFTDHLH--VALIRNGFVAFKDDETLDRGNEISSELSKAIEESN 75
YDV + ED + +L A +R F+ +D G I SEL +A+ S+
Sbjct: 86 YDVCVCHSEEDLVAAQDLVSYLEGSTASLRC-FLQLRDATP---GGAIVSELCQALSSSH 141
Query: 76 VSIVILSKNYASSPWC 91
+++++ + PWC
Sbjct: 142 CRVLLITPGFLQDPWC 157
>sp|B3Y618|TLR2_MACMU Toll-like receptor 2 OS=Macaca mulatta GN=TLR2 PE=2 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D + ++L V + N FK G I + +IE+S+
Sbjct: 641 YDAFVSYSERDAY--WVENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
++ +LS+N+ S WC EL
Sbjct: 699 TVFVLSENFVKSEWCKYEL 717
>sp|Q9Y2C9|TLR6_HUMAN Toll-like receptor 6 OS=Homo sapiens GN=TLR6 PE=1 SV=2
Length = 796
Score = 30.8 bits (68), Expect = 3.3, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 60 GNEISSELSKAIEESNVSIVILSKNYASSPWCLDEL 95
G I + IE+S SI +LS N+ S WC EL
Sbjct: 681 GKSIVENIINCIEKSYKSIFVLSPNFVQSEWCHYEL 716
>sp|B3Y613|TLR2_PANTR Toll-like receptor 2 OS=Pan troglodytes GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D + ++L V + N FK G I + +IE+S+
Sbjct: 641 YDAFVSYSERDAY--WVENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
++ +LS+N+ S WC EL
Sbjct: 699 TVFVLSENFVKSEWCKYEL 717
>sp|Q95M53|TLR2_MACFA Toll-like receptor 2 OS=Macaca fascicularis GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D + ++L V + N FK G I + +IE+S+
Sbjct: 641 YDAFVSYSERDAY--WVENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
++ +LS+N+ S WC EL
Sbjct: 699 TVFVLSENFVKSEWCKYEL 717
>sp|O60603|TLR2_HUMAN Toll-like receptor 2 OS=Homo sapiens GN=TLR2 PE=1 SV=1
Length = 784
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D + ++L V + N FK G I + +IE+S+
Sbjct: 641 YDAFVSYSERDAY--WVENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
++ +LS+N+ S WC EL
Sbjct: 699 TVFVLSENFVKSEWCKYEL 717
>sp|B3Y615|TLR2_GORGO Toll-like receptor 2 OS=Gorilla gorilla gorilla GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D + ++L V + N FK G I + +IE+S+
Sbjct: 641 YDAFVSYSERDAY--WVENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
++ +LS+N+ S WC EL
Sbjct: 699 TVFVLSENFVKSEWCKYEL 717
>sp|B3Y614|TLR2_PANPA Toll-like receptor 2 OS=Pan paniscus GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D + ++L V + N FK G I + +IE+S+
Sbjct: 641 YDAFVSYSERDAY--WVENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
++ +LS+N+ S WC EL
Sbjct: 699 TVFVLSENFVKSEWCKYEL 717
>sp|Q0GC71|TLR2_CAPHI Toll-like receptor 2 OS=Capra hircus GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 19/86 (22%)
Query: 20 YDVFLSFRGEDTR----------NNFTDHLHVALIRNGFVAFKDDETLDRGNEISSELSK 69
YD F+S+ +D+ +F + L + FV G I +
Sbjct: 641 YDAFVSYSEQDSYWVENLMVQELEHFNPPFKLCLHKRDFVP---------GKWIIDNIID 691
Query: 70 AIEESNVSIVILSKNYASSPWCLDEL 95
+IE+S +I +LS+N+ S WC EL
Sbjct: 692 SIEKSRKTIFVLSENFVRSEWCKYEL 717
>sp|B2LT62|TLR2_CAPIB Toll-like receptor 2 OS=Capra ibex GN=TLR2 PE=3 SV=1
Length = 784
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 19/86 (22%)
Query: 20 YDVFLSFRGEDTR----------NNFTDHLHVALIRNGFVAFKDDETLDRGNEISSELSK 69
YD F+S+ +D+ +F + L + FV G I +
Sbjct: 641 YDAFVSYSEQDSYWVENLMVQELEHFNPPFKLCLHKRDFVP---------GKWIIDNIID 691
Query: 70 AIEESNVSIVILSKNYASSPWCLDEL 95
+IE+S +I +LS+N+ S WC EL
Sbjct: 692 SIEKSRKTIFVLSENFVRSEWCKYEL 717
>sp|Q8W4S5|Y5371_ARATH Probable LRR receptor-like serine/threonine-protein kinase
At5g63710 OS=Arabidopsis thaliana GN=At5g63710 PE=2 SV=1
Length = 614
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 12 HHQILQTKYDVFLSFRGEDTR 32
HH++ +TKYD+F GED R
Sbjct: 247 HHRVRRTKYDIFFDVAGEDDR 267
>sp|Q99LH1|NOG2_MOUSE Nucleolar GTP-binding protein 2 OS=Mus musculus GN=Gnl2 PE=2 SV=2
Length = 728
Score = 30.8 bits (68), Expect = 4.0, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 92 LDE-LAKIVECGNKRNDRKVFAVFYGVDPTDRVFAKYEEEFKENHE--------KVLKWR 142
LDE +AK NK +K AV D +++VFAKY+EE K + E K KW
Sbjct: 600 LDEKIAKYQRFLNKAKAKKFSAVRISKDLSEKVFAKYKEEKKTSAEDSDAAPTKKARKWD 659
Query: 143 AAL 145
A +
Sbjct: 660 AQM 662
>sp|Q9DD78|TLR21_CHICK Toll-like receptor 2 type-1 OS=Gallus gallus GN=TLR2-1 PE=2 SV=1
Length = 793
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D+ N+ +++ V + F+ G I + +IE+S+
Sbjct: 650 YDAFVSYSENDS--NWVENIMVQQLEQACPPFRLCLHKRDFVPGKWIVDNIIDSIEKSHK 707
Query: 77 SIVILSKNYASSPWCLDEL 95
++ +LS+++ S WC EL
Sbjct: 708 TLFVLSEHFVQSEWCKYEL 726
>sp|B5T267|TLR2_BOSIN Toll-like receptor 2 OS=Bos indicus GN=TLR2 PE=3 SV=1
Length = 784
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D+ + ++L V + FK G I + +IE+S+
Sbjct: 641 YDAFVSYSERDSY--WVENLMVQELEQFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
+I +LS+N+ S WC EL
Sbjct: 699 TIFVLSENFVKSEWCKYEL 717
>sp|Q9EPQ1|TLR1_MOUSE Toll-like receptor 1 OS=Mus musculus GN=Tlr1 PE=1 SV=1
Length = 795
Score = 30.4 bits (67), Expect = 5.0, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 17/85 (20%)
Query: 19 KYDVFLSFRGEDTR--------NNFTDHLHVALIRNGFVAFKDDETLDRGNEISSELSKA 70
++ F+S+ G D+ N D + + L FV G I +
Sbjct: 639 QFHAFVSYSGHDSAWVKNELLPNLEKDDIQICLHERNFVP---------GKSIVENIINF 689
Query: 71 IEESNVSIVILSKNYASSPWCLDEL 95
IE+S SI +LS ++ S WC EL
Sbjct: 690 IEKSYKSIFVLSPHFIQSEWCHYEL 714
>sp|Q95LA9|TLR2_BOVIN Toll-like receptor 2 OS=Bos taurus GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D+ + ++L V + + FK G I + +IE+S+
Sbjct: 641 YDAFVSYSERDSY--WVENLMVQELEHFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
+I +LS+N+ S WC EL
Sbjct: 699 TIFVLSENFVKSEWCKYEL 717
>sp|Q704V6|TLR6_BOVIN Toll-like receptor 6 OS=Bos taurus GN=TLR6 PE=2 SV=1
Length = 793
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 60 GNEISSELSKAIEESNVSIVILSKNYASSPWCLDEL 95
G I + IE+S SI +LS N+ S WC EL
Sbjct: 681 GKSIVENIINCIEKSYKSIFVLSPNFVQSEWCHYEL 716
>sp|Q2V897|TLR2_BOSTR Toll-like receptor 2 OS=Boselaphus tragocamelus GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D+ + ++L V + + FK G I + +IE+S+
Sbjct: 641 YDAFVSYSERDSY--WVENLMVQELEHFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
+I +LS+N+ S WC EL
Sbjct: 699 TIFVLSENFVKSEWCKYEL 717
>sp|B2LT61|TLR2_BISBI Toll-like receptor 2 OS=Bison bison GN=TLR2 PE=3 SV=1
Length = 784
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D+ + ++L V + FK G I + +IE+S+
Sbjct: 641 YDAFVSYSERDSY--WVENLMVQELEQFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
+I +LS+N+ S WC EL
Sbjct: 699 TIFVLSENFVXSEWCKYEL 717
>sp|Q6T752|TLR2_HORSE Toll-like receptor 2 OS=Equus caballus GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D+ + ++L V + + FK G I + +IE+S+
Sbjct: 641 YDAFVSYSERDSY--WVENLMVQELEHFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
+I +LS+N+ S WC EL
Sbjct: 699 TIFVLSENFVKSEWCKYEL 717
>sp|B2LT64|TLR2_GIRCA Toll-like receptor 2 OS=Giraffa camelopardalis GN=TLR2 PE=3 SV=1
Length = 784
Score = 30.0 bits (66), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDHLHVALIRNGFVAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D+ + ++L V + + FK G I + +IE+S+
Sbjct: 641 YDAFVSYSERDSY--WVENLMVRELEHFDPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
+I +LS+N+ S WC EL
Sbjct: 699 TIFVLSENFVKSEWCKYEL 717
>sp|A5CW91|SYGB_VESOH Glycine--tRNA ligase beta subunit OS=Vesicomyosocius okutanii
subsp. Calyptogena okutanii (strain HA) GN=glyS PE=3
SV=1
Length = 677
Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 5 HTSSSSTHHQILQTKYDVF-LSFRGEDTRNNFTDHLHVALIRNGFVAFKDDETLDRGNEI 63
H S++ T++ L T++D LS+ ++ F +A++ NG ++++T++R +
Sbjct: 22 HLSNALTYN--LTTEFDKLKLSYSSVES---FATPRRLAVLVNGLQLQQNNQTIERKGPL 76
Query: 64 SSELSKAIE 72
SEL KAIE
Sbjct: 77 ISELDKAIE 85
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.130 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,522,857
Number of Sequences: 539616
Number of extensions: 2117191
Number of successful extensions: 5741
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 5690
Number of HSP's gapped (non-prelim): 65
length of query: 158
length of database: 191,569,459
effective HSP length: 108
effective length of query: 50
effective length of database: 133,290,931
effective search space: 6664546550
effective search space used: 6664546550
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)