Query 041428
Match_columns 322
No_of_seqs 159 out of 1514
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 11:30:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041428.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041428hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h7u_A Aldo-keto reductase; st 100.0 1.7E-68 5.8E-73 496.1 31.9 308 11-321 23-334 (335)
2 3h7r_A Aldo-keto reductase; st 100.0 2.6E-68 9E-73 493.9 27.5 304 12-322 24-331 (331)
3 3ln3_A Dihydrodiol dehydrogena 100.0 3.4E-66 1.2E-70 479.2 33.1 300 12-313 5-322 (324)
4 1qwk_A Aldose reductase, aldo- 100.0 1.7E-65 5.8E-70 472.9 32.1 293 13-313 5-314 (317)
5 3o3r_A Aldo-keto reductase fam 100.0 2.8E-65 9.4E-70 471.5 32.7 299 13-313 2-314 (316)
6 1us0_A Aldose reductase; oxido 100.0 4.9E-65 1.7E-69 469.8 33.8 297 14-312 3-313 (316)
7 2wzm_A Aldo-keto reductase; ox 100.0 2.2E-65 7.6E-70 464.5 29.5 273 1-296 1-273 (283)
8 1afs_A 3-alpha-HSD, 3-alpha-hy 100.0 4.5E-65 1.5E-69 471.3 32.1 300 12-313 4-321 (323)
9 4gie_A Prostaglandin F synthas 100.0 4.4E-65 1.5E-69 464.4 31.1 267 11-297 11-278 (290)
10 3buv_A 3-OXO-5-beta-steroid 4- 100.0 1.1E-64 3.6E-69 469.4 33.1 300 11-312 5-323 (326)
11 2bgs_A Aldose reductase; holoe 100.0 5.7E-65 1.9E-69 473.2 31.0 304 13-321 36-343 (344)
12 3o0k_A Aldo/keto reductase; ss 100.0 5E-65 1.7E-69 462.0 28.4 259 11-290 24-282 (283)
13 3f7j_A YVGN protein; aldo-keto 100.0 1.7E-64 5.8E-69 457.4 31.1 263 11-296 4-267 (276)
14 1s1p_A Aldo-keto reductase fam 100.0 2.5E-64 8.7E-69 467.7 31.7 299 12-312 4-320 (331)
15 1vbj_A Prostaglandin F synthas 100.0 5.5E-64 1.9E-68 454.9 31.7 264 10-296 6-270 (281)
16 1mi3_A Xylose reductase, XR; a 100.0 4.8E-64 1.7E-68 464.3 31.8 285 11-296 3-309 (322)
17 1zgd_A Chalcone reductase; pol 100.0 4E-64 1.4E-68 462.8 30.9 299 11-320 4-312 (312)
18 1hw6_A 2,5-diketo-D-gluconic a 100.0 3.3E-64 1.1E-68 456.0 29.4 264 12-294 2-265 (278)
19 4f40_A Prostaglandin F2-alpha 100.0 4.3E-64 1.5E-68 457.5 30.1 270 13-297 10-280 (288)
20 4gac_A Alcohol dehydrogenase [ 100.0 8.7E-64 3E-68 463.2 31.4 284 13-297 2-298 (324)
21 3b3e_A YVGN protein; aldo-keto 100.0 8.7E-64 3E-68 459.0 30.7 262 12-296 39-301 (310)
22 3up8_A Putative 2,5-diketo-D-g 100.0 3.2E-64 1.1E-68 459.5 27.5 260 10-292 21-281 (298)
23 1mzr_A 2,5-diketo-D-gluconate 100.0 4.1E-63 1.4E-67 451.7 29.9 265 11-296 23-287 (296)
24 3b3d_A YTBE protein, putative 100.0 2.1E-62 7E-67 451.4 30.1 266 12-297 39-306 (314)
25 1vp5_A 2,5-diketo-D-gluconic a 100.0 9E-62 3.1E-66 443.3 29.3 262 14-294 16-278 (298)
26 3krb_A Aldose reductase; ssgci 100.0 1.1E-61 3.6E-66 450.5 27.0 279 19-299 20-324 (334)
27 1ur3_M Hypothetical oxidoreduc 100.0 1.3E-60 4.3E-65 440.4 27.9 262 12-295 22-317 (319)
28 3eau_A Voltage-gated potassium 100.0 1.8E-60 6.3E-65 441.4 28.6 265 12-295 2-325 (327)
29 3lut_A Voltage-gated potassium 100.0 3E-60 1E-64 446.3 27.5 266 11-296 36-360 (367)
30 3n6q_A YGHZ aldo-keto reductas 100.0 1.2E-59 4.2E-64 439.0 30.0 266 9-293 9-334 (346)
31 1pyf_A IOLS protein; beta-alph 100.0 5.3E-60 1.8E-64 435.6 26.0 257 13-292 1-310 (312)
32 3erp_A Putative oxidoreductase 100.0 1.6E-59 5.5E-64 439.0 29.3 268 7-292 28-350 (353)
33 3v0s_A Perakine reductase; AKR 100.0 3.7E-60 1.3E-64 440.8 23.6 268 13-305 1-321 (337)
34 1pz1_A GSP69, general stress p 100.0 4.7E-60 1.6E-64 439.5 24.2 260 13-294 1-313 (333)
35 3n2t_A Putative oxidoreductase 100.0 1E-59 3.5E-64 439.6 25.2 277 5-306 9-344 (348)
36 1ynp_A Oxidoreductase, AKR11C1 100.0 3.3E-59 1.1E-63 430.7 26.3 267 4-296 12-312 (317)
37 1lqa_A TAS protein; TIM barrel 100.0 1.5E-58 5E-63 431.8 27.8 275 13-293 1-340 (346)
38 4exb_A Putative uncharacterize 100.0 7.5E-58 2.6E-62 416.8 22.7 242 5-282 22-292 (292)
39 1gve_A Aflatoxin B1 aldehyde r 100.0 1E-56 3.4E-61 416.3 22.4 255 23-296 4-320 (327)
40 2bp1_A Aflatoxin B1 aldehyde r 100.0 1.8E-56 6E-61 419.4 22.6 259 19-296 33-353 (360)
41 3cf4_A Acetyl-COA decarboxylas 98.2 2E-07 7E-12 94.6 -0.0 131 103-268 231-384 (807)
42 2ovl_A Putative racemase; stru 82.0 29 0.00099 31.3 14.7 149 34-215 145-300 (371)
43 3gd6_A Muconate cycloisomerase 80.5 20 0.00069 32.8 12.2 154 34-219 141-300 (391)
44 1mdl_A Mandelate racemase; iso 80.4 32 0.0011 30.8 14.4 147 35-214 144-297 (359)
45 2oz8_A MLL7089 protein; struct 76.4 45 0.0015 30.3 15.5 152 34-214 144-296 (389)
46 2o56_A Putative mandelate race 75.8 47 0.0016 30.3 15.0 150 35-217 152-326 (407)
47 2hzg_A Mandelate racemase/muco 75.8 47 0.0016 30.3 13.5 148 34-214 144-304 (401)
48 3rr1_A GALD, putative D-galact 74.5 53 0.0018 30.2 13.2 147 34-216 124-288 (405)
49 2og9_A Mandelate racemase/muco 74.3 34 0.0012 31.2 11.9 147 35-215 162-316 (393)
50 2gl5_A Putative dehydratase pr 74.0 53 0.0018 30.0 15.1 150 35-217 150-329 (410)
51 2qq6_A Mandelate racemase/muco 73.8 42 0.0014 30.7 12.4 150 35-217 149-321 (410)
52 2q5c_A NTRC family transcripti 73.5 19 0.00066 29.5 9.0 67 142-213 78-147 (196)
53 2nql_A AGR_PAT_674P, isomerase 73.3 54 0.0018 29.7 14.0 152 35-219 164-320 (388)
54 2p8b_A Mandelate racemase/muco 73.3 44 0.0015 30.0 12.2 151 35-218 141-298 (369)
55 2pgw_A Muconate cycloisomerase 72.5 56 0.0019 29.5 14.8 150 35-217 147-301 (384)
56 3mwc_A Mandelate racemase/muco 72.3 59 0.002 29.7 13.0 149 36-218 164-316 (400)
57 2qgy_A Enolase from the enviro 71.3 60 0.0021 29.4 15.4 150 34-216 148-304 (391)
58 2pp0_A L-talarate/galactarate 71.0 47 0.0016 30.3 12.0 146 35-214 175-328 (398)
59 2rdx_A Mandelate racemase/muco 70.8 60 0.0021 29.2 14.5 150 35-218 145-298 (379)
60 2ox4_A Putative mandelate race 69.6 66 0.0023 29.2 14.0 150 35-217 146-320 (403)
61 2qde_A Mandelate racemase/muco 67.0 75 0.0026 28.9 12.6 150 35-219 145-302 (397)
62 1nu5_A Chloromuconate cycloiso 66.3 73 0.0025 28.5 15.1 152 35-219 142-301 (370)
63 1r0m_A N-acylamino acid racema 65.1 78 0.0027 28.4 13.3 147 35-217 148-299 (375)
64 2poz_A Putative dehydratase; o 64.8 82 0.0028 28.5 14.7 151 34-217 136-310 (392)
65 2hxt_A L-fuconate dehydratase; 64.0 91 0.0031 28.8 13.3 147 34-214 197-351 (441)
66 3ozy_A Putative mandelate race 63.4 88 0.003 28.4 15.4 150 33-215 149-305 (389)
67 1tzz_A Hypothetical protein L1 61.4 94 0.0032 28.1 12.8 150 35-215 165-326 (392)
68 2zc8_A N-acylamino acid racema 61.1 90 0.0031 27.9 11.7 147 35-217 141-292 (369)
69 3bjs_A Mandelate racemase/muco 60.9 1E+02 0.0035 28.3 12.7 147 34-214 183-338 (428)
70 2pju_A Propionate catabolism o 60.4 28 0.00094 29.3 7.5 69 142-213 90-159 (225)
71 2zad_A Muconate cycloisomerase 60.1 92 0.0031 27.6 14.1 151 35-218 139-295 (345)
72 3jva_A Dipeptide epimerase; en 59.9 95 0.0033 27.7 13.8 150 35-217 139-294 (354)
73 1rvk_A Isomerase/lactonizing e 57.9 1.1E+02 0.0036 27.6 14.0 148 34-214 148-309 (382)
74 2r14_A Morphinone reductase; H 57.2 54 0.0018 29.8 9.4 40 148-189 288-327 (377)
75 3q45_A Mandelate racemase/muco 57.2 1.1E+02 0.0037 27.5 14.9 153 34-219 139-297 (368)
76 4djd_D C/Fe-SP, corrinoid/iron 55.3 46 0.0016 29.6 8.3 92 108-217 91-189 (323)
77 3iix_A Biotin synthetase, puta 53.4 77 0.0026 27.8 9.7 120 142-272 84-214 (348)
78 3eez_A Putative mandelate race 51.9 1.3E+02 0.0046 27.0 13.5 152 34-219 144-299 (378)
79 1vyr_A Pentaerythritol tetrani 51.3 1.3E+02 0.0046 26.9 11.0 39 149-189 284-322 (364)
80 1tkk_A Similar to chloromucona 50.1 1.4E+02 0.0047 26.6 14.3 153 35-218 140-299 (366)
81 2h9a_B CO dehydrogenase/acetyl 50.0 97 0.0033 27.3 9.5 89 109-216 85-181 (310)
82 1sjd_A N-acylamino acid racema 50.0 1.4E+02 0.0048 26.6 14.7 148 35-217 141-293 (368)
83 2qgq_A Protein TM_1862; alpha- 49.4 1.2E+02 0.004 26.3 10.1 123 142-273 33-178 (304)
84 2xvc_A ESCRT-III, SSO0910; cel 48.9 13 0.00044 24.1 2.6 21 142-162 37-57 (59)
85 3stp_A Galactonate dehydratase 48.5 75 0.0026 29.2 9.0 149 34-215 178-339 (412)
86 1z41_A YQJM, probable NADH-dep 48.5 1.4E+02 0.0049 26.3 11.4 132 38-189 145-306 (338)
87 3szu_A ISPH, 4-hydroxy-3-methy 46.4 21 0.00072 31.9 4.6 107 158-272 171-290 (328)
88 3ddm_A Putative mandelate race 46.4 1.4E+02 0.0047 27.1 10.4 148 36-215 156-309 (392)
89 1ydn_A Hydroxymethylglutaryl-C 46.1 77 0.0026 27.4 8.3 99 97-214 25-139 (295)
90 4a35_A Mitochondrial enolase s 46.0 1.8E+02 0.0063 26.8 12.8 148 34-214 200-356 (441)
91 3r0u_A Enzyme of enolase super 45.7 1.7E+02 0.0058 26.4 14.7 153 35-219 142-301 (379)
92 2gou_A Oxidoreductase, FMN-bin 45.7 1.7E+02 0.0057 26.3 11.5 40 149-190 283-322 (365)
93 1vpq_A Hypothetical protein TM 45.7 71 0.0024 27.6 7.9 78 41-125 39-130 (273)
94 3ro6_B Putative chloromuconate 45.6 1.3E+02 0.0044 26.8 9.9 151 35-218 140-297 (356)
95 3qy7_A Tyrosine-protein phosph 45.4 93 0.0032 26.5 8.6 183 34-246 17-223 (262)
96 1x87_A Urocanase protein; stru 45.0 55 0.0019 30.9 7.2 84 78-191 159-262 (551)
97 4dwd_A Mandelate racemase/muco 44.4 1.8E+02 0.0062 26.3 13.6 149 34-216 138-300 (393)
98 1uwk_A Urocanate hydratase; hy 44.0 55 0.0019 31.0 7.0 126 41-191 116-267 (557)
99 3l5l_A Xenobiotic reductase A; 43.5 1.8E+02 0.0062 26.0 10.7 38 150-189 286-324 (363)
100 1icp_A OPR1, 12-oxophytodienoa 43.2 92 0.0031 28.2 8.6 37 151-189 293-329 (376)
101 3my9_A Muconate cycloisomerase 42.5 1.3E+02 0.0046 26.9 9.6 152 35-219 146-304 (377)
102 3r4e_A Mandelate racemase/muco 42.3 2E+02 0.0069 26.2 11.3 151 34-217 142-331 (418)
103 3qld_A Mandelate racemase/muco 42.2 1.9E+02 0.0067 26.0 13.7 150 35-219 149-302 (388)
104 3i4k_A Muconate lactonizing en 42.1 1.9E+02 0.0066 25.9 15.5 152 35-219 148-307 (383)
105 1t57_A Conserved protein MTH16 40.9 1.5E+02 0.0052 24.4 9.5 93 145-247 37-135 (206)
106 2gdq_A YITF; mandelate racemas 40.6 2E+02 0.0069 25.7 12.6 145 37-214 141-293 (382)
107 1vpy_A Protein (hypothetical p 40.6 1.8E+02 0.0062 25.2 10.3 95 25-126 14-125 (289)
108 1wa3_A 2-keto-3-deoxy-6-phosph 40.6 1.4E+02 0.0048 23.9 8.7 46 161-213 63-109 (205)
109 3l23_A Sugar phosphate isomera 39.0 1.7E+02 0.0056 25.1 9.4 48 26-73 14-71 (303)
110 4djd_C C/Fe-SP, corrinoid/iron 39.0 1.8E+02 0.0062 27.0 9.8 168 41-241 26-226 (446)
111 3i6e_A Muconate cycloisomerase 38.0 2.2E+02 0.0077 25.5 14.7 151 35-219 148-305 (385)
112 1nvm_A HOA, 4-hydroxy-2-oxoval 37.8 1E+02 0.0035 27.4 7.9 108 93-215 26-140 (345)
113 3ec1_A YQEH GTPase; atnos1, at 37.8 2.2E+02 0.0075 25.4 11.0 117 34-173 56-178 (369)
114 2akz_A Gamma enolase, neural; 37.7 1.5E+02 0.0052 27.4 9.3 94 95-214 271-369 (439)
115 2bas_A YKUI protein; EAL domai 37.5 47 0.0016 30.6 5.8 115 81-215 105-234 (431)
116 2fkn_A Urocanate hydratase; ro 37.1 1E+02 0.0034 29.2 7.6 126 41-191 112-263 (552)
117 3dnf_A ISPH, LYTB, 4-hydroxy-3 36.9 13 0.00045 32.8 1.7 108 156-272 155-274 (297)
118 3qtp_A Enolase 1; glycolysis, 36.7 2.5E+02 0.0086 26.0 10.4 94 95-214 280-379 (441)
119 3gr7_A NADPH dehydrogenase; fl 36.3 2.3E+02 0.0078 25.1 11.2 93 82-190 209-307 (340)
120 3tj4_A Mandelate racemase; eno 36.2 2.4E+02 0.008 25.2 13.7 149 34-215 150-306 (372)
121 3dg3_A Muconate cycloisomerase 35.9 2.4E+02 0.0081 25.1 13.1 152 35-219 139-297 (367)
122 2ps2_A Putative mandelate race 35.5 2.4E+02 0.0081 25.1 13.6 151 35-219 146-301 (371)
123 3fv9_G Mandelate racemase/muco 34.5 2.6E+02 0.0088 25.2 13.2 153 34-219 144-305 (386)
124 2ftp_A Hydroxymethylglutaryl-C 34.3 1.4E+02 0.0046 26.0 8.0 99 97-214 29-143 (302)
125 2hsa_B 12-oxophytodienoate red 34.2 2.7E+02 0.0092 25.3 12.7 42 147-190 307-348 (402)
126 3k13_A 5-methyltetrahydrofolat 34.1 1.6E+02 0.0054 25.8 8.3 101 95-216 35-141 (300)
127 1vp8_A Hypothetical protein AF 34.0 1.9E+02 0.0067 23.6 11.1 93 145-247 29-128 (201)
128 1tx2_A DHPS, dihydropteroate s 33.1 2.5E+02 0.0084 24.5 9.7 64 147-216 103-167 (297)
129 2r6o_A Putative diguanylate cy 32.5 2E+02 0.0068 24.8 8.8 113 81-213 113-238 (294)
130 3sjn_A Mandelate racemase/muco 31.7 2.8E+02 0.0095 24.7 11.3 147 37-216 148-304 (374)
131 4h1z_A Enolase Q92ZS5; dehydra 31.6 3E+02 0.01 25.0 12.2 153 34-219 187-344 (412)
132 3ik4_A Mandelate racemase/muco 31.5 2.8E+02 0.0095 24.7 15.3 154 34-219 142-301 (365)
133 2ph5_A Homospermidine synthase 31.4 23 0.00078 33.5 2.5 22 37-58 94-115 (480)
134 2yci_X 5-methyltetrahydrofolat 31.2 2.5E+02 0.0085 24.0 9.5 99 95-216 32-133 (271)
135 3l8a_A METC, putative aminotra 31.1 2.8E+02 0.0096 24.6 12.5 144 36-217 76-236 (421)
136 3g8r_A Probable spore coat pol 30.3 2.8E+02 0.0095 24.8 9.3 133 34-194 75-229 (350)
137 3t7v_A Methylornithine synthas 30.2 2E+02 0.0067 25.3 8.5 122 142-273 91-224 (350)
138 1o94_A Tmadh, trimethylamine d 29.9 3.3E+02 0.011 26.8 10.8 35 148-182 280-315 (729)
139 3noy_A 4-hydroxy-3-methylbut-2 29.7 2.2E+02 0.0076 25.6 8.5 89 96-213 45-138 (366)
140 3hgj_A Chromate reductase; TIM 29.7 2.9E+02 0.01 24.4 12.3 94 81-189 218-317 (349)
141 3p3b_A Mandelate racemase/muco 29.6 1.4E+02 0.0048 27.0 7.5 64 148-214 240-311 (392)
142 3en0_A Cyanophycinase; serine 29.4 1.8E+02 0.0063 25.2 7.9 21 146-166 132-152 (291)
143 2al1_A Enolase 1, 2-phospho-D- 29.1 2.3E+02 0.0078 26.2 8.9 94 95-214 274-372 (436)
144 4hnl_A Mandelate racemase/muco 28.8 3.3E+02 0.011 24.7 11.9 151 34-217 152-332 (421)
145 1ps9_A 2,4-dienoyl-COA reducta 28.7 4.1E+02 0.014 25.7 12.9 74 38-117 142-247 (671)
146 3sbf_A Mandelate racemase / mu 28.6 3.3E+02 0.011 24.6 13.0 151 34-217 132-312 (401)
147 3v7e_A Ribosome-associated pro 27.7 41 0.0014 23.2 2.7 58 151-215 3-60 (82)
148 3toy_A Mandelate racemase/muco 27.5 3.4E+02 0.011 24.3 11.6 147 34-213 166-320 (383)
149 3p6l_A Sugar phosphate isomera 27.5 1.4E+02 0.0049 24.6 6.8 33 26-58 11-43 (262)
150 1ydo_A HMG-COA lyase; TIM-barr 26.9 1.9E+02 0.0067 25.2 7.7 99 97-214 27-141 (307)
151 3u9i_A Mandelate racemase/muco 26.7 1.5E+02 0.0052 26.9 7.2 70 148-219 259-331 (393)
152 2dqw_A Dihydropteroate synthas 26.2 2.5E+02 0.0086 24.4 8.2 67 143-216 88-154 (294)
153 3ijw_A Aminoglycoside N3-acety 25.8 82 0.0028 27.2 4.8 53 99-161 16-69 (268)
154 3l52_A Orotidine 5'-phosphate 25.7 3.3E+02 0.011 23.6 10.3 156 93-267 42-212 (284)
155 4e5t_A Mandelate racemase / mu 25.6 3.7E+02 0.013 24.2 14.2 148 35-215 151-317 (404)
156 3dxi_A Putative aldolase; TIM 25.4 3.4E+02 0.012 23.8 9.0 106 97-214 23-133 (320)
157 3ekg_A Mandelate racemase/muco 25.4 1.7E+02 0.0058 26.8 7.2 64 148-213 250-319 (404)
158 2qdd_A Mandelate racemase/muco 25.4 3.6E+02 0.012 23.9 15.2 147 35-218 145-298 (378)
159 3k30_A Histamine dehydrogenase 25.0 4.6E+02 0.016 25.4 10.9 18 39-56 158-175 (690)
160 3sma_A FRBF; N-acetyl transfer 24.7 1.2E+02 0.004 26.5 5.6 58 98-165 22-80 (286)
161 3t6c_A RSPA, putative MAND fam 24.3 4.1E+02 0.014 24.3 12.0 68 148-217 280-351 (440)
162 4dxk_A Mandelate racemase / mu 24.2 1.8E+02 0.0061 26.4 7.2 67 149-217 251-321 (400)
163 3kru_A NADH:flavin oxidoreduct 24.2 3.7E+02 0.013 23.7 11.7 40 148-189 266-306 (343)
164 3qc0_A Sugar isomerase; TIM ba 24.2 3E+02 0.01 22.6 9.3 52 22-73 2-57 (275)
165 3s83_A Ggdef family protein; s 23.5 3.1E+02 0.011 22.6 8.4 113 82-213 90-214 (259)
166 1wuf_A Hypothetical protein LI 23.3 4E+02 0.014 23.8 12.0 148 35-219 161-314 (393)
167 3no3_A Glycerophosphodiester p 23.1 96 0.0033 25.9 4.7 66 151-216 121-204 (238)
168 3s5s_A Mandelate racemase/muco 22.7 4.2E+02 0.014 23.8 15.5 154 34-219 143-302 (389)
169 4e4u_A Mandalate racemase/muco 22.6 4.3E+02 0.015 23.9 14.7 149 34-215 143-310 (412)
170 3ks6_A Glycerophosphoryl diest 22.6 1.6E+02 0.0056 24.6 6.2 29 152-180 124-152 (250)
171 3dip_A Enolase; structural gen 22.5 2.1E+02 0.0072 26.0 7.3 67 148-216 254-324 (410)
172 2cw6_A Hydroxymethylglutaryl-C 22.4 2.3E+02 0.0079 24.4 7.3 101 94-214 24-140 (298)
173 2lbw_A H/ACA ribonucleoprotein 22.4 2.4E+02 0.0081 20.8 6.4 64 145-214 6-69 (121)
174 1r30_A Biotin synthase; SAM ra 22.4 2.9E+02 0.0098 24.4 8.1 119 142-273 99-230 (369)
175 3ugv_A Enolase; enzyme functio 22.3 4.3E+02 0.015 23.7 9.8 147 35-214 171-327 (390)
176 3mkc_A Racemase; metabolic pro 22.3 2.2E+02 0.0076 25.7 7.4 66 148-215 246-315 (394)
177 3tji_A Mandelate racemase/muco 22.0 4.5E+02 0.015 23.9 11.9 151 34-217 153-333 (422)
178 1kko_A 3-methylaspartate ammon 21.9 4.5E+02 0.015 23.8 10.8 71 145-217 282-361 (413)
179 3vcn_A Mannonate dehydratase; 21.9 4.5E+02 0.015 23.9 12.4 151 34-217 149-338 (425)
180 2uyg_A 3-dehydroquinate dehydr 21.8 1.5E+02 0.0051 23.1 5.1 80 94-197 24-106 (149)
181 3mqt_A Mandelate racemase/muco 21.7 2.3E+02 0.0079 25.5 7.4 146 38-216 155-311 (394)
182 1vhn_A Putative flavin oxidore 21.5 1.3E+02 0.0044 26.3 5.5 131 34-191 68-214 (318)
183 3guv_A Site-specific recombina 21.2 1.1E+02 0.0037 23.8 4.4 51 100-165 59-111 (167)
184 3ngj_A Deoxyribose-phosphate a 21.2 95 0.0032 26.3 4.2 29 33-61 153-181 (239)
185 4hb7_A Dihydropteroate synthas 20.4 3.8E+02 0.013 23.0 7.9 66 145-216 68-133 (270)
186 2jrt_A Uncharacterized protein 20.3 66 0.0022 23.0 2.6 63 15-77 11-77 (95)
187 4f3h_A Fimxeal, putative uncha 20.2 3.6E+02 0.012 22.0 9.0 113 82-213 94-218 (250)
No 1
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=100.00 E-value=1.7e-68 Score=496.14 Aligned_cols=308 Identities=45% Similarity=0.873 Sum_probs=277.2
Q ss_pred CCcceEEcCCCCccCcceeecccCChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcC-CCCCcEEEEecC
Q 041428 11 HKAESFKLLSGHTIPAVGLGTWKSGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTG-IQRKDLFVTSKL 89 (322)
Q Consensus 11 ~~m~~~~l~tg~~vs~lglG~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~-~~R~~~~i~tK~ 89 (322)
..|+|++|+||.+||+||||||+.+.+++.++|++|+++|||+||||+.||+|+.+|++|++.++.+ ++|+++||+||+
T Consensus 23 ~~m~~~~L~tg~~v~~lglGt~~~~~~~~~~~v~~Al~~Gi~~~DTA~~YgsE~~lG~al~~~~~~g~~~R~~v~I~TK~ 102 (335)
T 3h7u_A 23 NAITFFKLNTGAKFPSVGLGTWQASPGLVGDAVAAAVKIGYRHIDCAQIYGNEKEIGAVLKKLFEDRVVKREDLFITSKL 102 (335)
T ss_dssp -CCCEEECTTSCEEESBCEECTTCCHHHHHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHHHHHTTSCCGGGCEEEEEE
T ss_pred cCCceEEcCCCCEecceeEeCCcCCHHHHHHHHHHHHHcCCCEEECCcccCCHHHHHHHHHHHHhcCCCCcceeEEEeee
Confidence 3799999999999999999999999999999999999999999999999999999999999877767 489999999999
Q ss_pred CCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCC
Q 041428 90 WCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFT 169 (322)
Q Consensus 90 ~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~ 169 (322)
|..+.+++.+++++++||++||+||||+|+||||++..++..++ ........+..++|++|++|+++||||+||||||+
T Consensus 103 ~~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~-~~~~~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~ 181 (335)
T 3h7u_A 103 WCTDHDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGSVGI-KPENLLPVDIPSTWKAMEALYDSGKARAIGVSNFS 181 (335)
T ss_dssp CGGGCSTTHHHHHHHHHHHHHTCSCBSEEEECSSCEECSSCSSC-CGGGEECCCHHHHHHHHHHHHHTTSBSSEEEESCC
T ss_pred CCCCCCHHHHHHHHHHHHHHcCCCceeEEEEcCCCccccccccc-cccccccCCHHHHHHHHHHHHHcCCccEEEecCCC
Confidence 98888999999999999999999999999999997654321111 11112235689999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCC---CCCCCCHHHHHHHHhcCCCHHHH
Q 041428 170 LKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAG---RDLIHDPTVERIAKKLNKSPGQI 246 (322)
Q Consensus 170 ~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l---~~~~~~~~l~~la~~~~~s~~ql 246 (322)
+++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||+++|.. ...+..+.+.++|+++|+|++|+
T Consensus 182 ~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~sPL~~g~~~~~~~~~~~~~~l~~iA~~~g~t~aqv 261 (335)
T 3h7u_A 182 TKKLADLLELARVPPAVNQVECHPSWRQTKLQEFCKSKGVHLSAYSPLGSPGTTWLKSDVLKNPILNMVAEKLGKSPAQV 261 (335)
T ss_dssp HHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTCCTTCTTSCCCGGGCHHHHHHHHHHTCCHHHH
T ss_pred HHHHHHHHHhCCCCeEEEecccccccCCHHHHHHHHHCCCEEEEeccCcCCCCCCCCccccccHHHHHHHHHHCcCHHHH
Confidence 999999999999999999999999999999999999999999999999873322 23455789999999999999999
Q ss_pred HHHHhhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCcccccccccccCCCCCccccccCCCCC
Q 041428 247 LLKWGIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRLLHGEILFVNSSAGPFRCVADLWDHE 321 (322)
Q Consensus 247 al~~~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 321 (322)
||+|++++|++||||+++++|+++|+++++++||++++++|+++.++ +.+.| +.|++++++||++++++|+.+
T Consensus 262 aL~w~l~~~~~vI~g~~~~~~l~enl~a~~~~L~~e~~~~i~~l~~~-~~~~~-~~~~~~~~~p~~~~~~~~~~~ 334 (335)
T 3h7u_A 262 ALRWGLQMGHSVLPKSTNEGRIKENFNVFDWSIPDYMFAKFAEIEQA-RLVTG-SFLVHETLSPYKSIEELWDGE 334 (335)
T ss_dssp HHHHHHHTTCEECCBCSCHHHHHHHHCCSSCCCCHHHHHHGGGSCCC-CSCCC-GGGBCTTTSSBSSHHHHTTTC
T ss_pred HHHHHHHCCCEEEeCCCCHHHHHHHHhhCCCCcCHHHHHHHHhHhhc-Ccccc-ceeccCCCCCccccccccccc
Confidence 99999999999999999999999999999999999999999999875 44578 889999999999999999976
No 2
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=100.00 E-value=2.6e-68 Score=493.90 Aligned_cols=304 Identities=41% Similarity=0.795 Sum_probs=271.9
Q ss_pred CcceEEcCCCCccCcceeecccCChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcC-CCCCcEEEEecCC
Q 041428 12 KAESFKLLSGHTIPAVGLGTWKSGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTG-IQRKDLFVTSKLW 90 (322)
Q Consensus 12 ~m~~~~l~tg~~vs~lglG~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~-~~R~~~~i~tK~~ 90 (322)
.|++++|+||.+||+||||||+ ++.++|++|+++|||+||||+.||+|+.+|++|++.+..| ++|+++||+||+|
T Consensus 24 ~m~~~~L~tg~~vs~lglGt~~----~~~~~v~~Al~~Gi~~~DTA~~YgsE~~lG~al~~~~~~g~~~R~~v~I~TK~~ 99 (331)
T 3h7r_A 24 PIRFFELNTGAKLPCVGLGTYA----MVATAIEQAIKIGYRHIDCASIYGNEKEIGGVLKKLIGDGFVKREELFITSKLW 99 (331)
T ss_dssp -CCEEECTTSCEEESBEEECTT----CCHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHHHHHTTSSCGGGCEEEEEEC
T ss_pred CCcEEECCCCCEecCEeeccHH----HHHHHHHHHHHcCCCEEECccccCCHHHHHHHHHHHhhcCCCCchhEEEEEeeC
Confidence 7999999999999999999997 6679999999999999999999999999999999877667 4899999999999
Q ss_pred CCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCCH
Q 041428 91 CADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFTL 170 (322)
Q Consensus 91 ~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~ 170 (322)
..+.+++.+++++++||++||+||||+|++|||++...+..++ ........+..++|++|++|+++||||+||||||++
T Consensus 100 ~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~-~~~~~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~ 178 (331)
T 3h7r_A 100 SNDHLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKESLMP-TPEMLTKPDITSTWKAMEALYDSGKARAIGVSNFSS 178 (331)
T ss_dssp GGGCSTTHHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCSSC-CGGGEECCCHHHHHHHHHHHHHTTSBSSEEEESCCH
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCeeEEEEEecCcccccccccc-cccccccCCHHHHHHHHHHHHHcCCCcEEEecCCCH
Confidence 8888999999999999999999999999999997653321111 111122356899999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCC---CCCCCCHHHHHHHHhcCCCHHHHH
Q 041428 171 KKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAG---RDLIHDPTVERIAKKLNKSPGQIL 247 (322)
Q Consensus 171 ~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l---~~~~~~~~l~~la~~~~~s~~qla 247 (322)
++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||+++|.. ...+..+.+.++|+++|+|++|+|
T Consensus 179 ~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~g~~~~~~~~~~~~~~l~~iA~~~g~t~aqva 258 (331)
T 3h7r_A 179 KKLTDLLNVARVTPAVNQVECHPVWQQQGLHELCKSKGVHLSGYSPLGSQSKGEVRLKVLQNPIVTEVAEKLGKTTAQVA 258 (331)
T ss_dssp HHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTSCSCTTTTTHHHHTCHHHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHhcCCCceeEEeecccccCCHHHHHHHHHCCCEEEEeCCCCCCCCCCCccchhcCHHHHHHHHHHCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999873321 123456889999999999999999
Q ss_pred HHHhhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCcccccccccccCCCCCccccccCCCCCC
Q 041428 248 LKWGIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRLLHGEILFVNSSAGPFRCVADLWDHED 322 (322)
Q Consensus 248 l~~~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 322 (322)
|+|++++|++||||+++++|+++|+++++++||+++++.|+++.++ +.+.| |.|++..++||++++++|+++.
T Consensus 259 L~w~l~~~~~vI~g~~~~~~l~en~~a~~~~L~~ee~~~l~~l~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 331 (331)
T 3h7r_A 259 LRWGLQTGHSVLPKSSSGARLKENLDVFDWSIPEDLFTKFSNIPQE-KFCRA-TEFAHETHGFYKTIEELWDGEI 331 (331)
T ss_dssp HHHHHHTTCEECCCCSCHHHHHHHTCCSSCCCCHHHHGGGGGSCCC-CSCCC-GGGCCTTTCSSCSHHHHTTTCC
T ss_pred HHHHHHCCCEEEeCCCCHHHHHHHHhhCCCCcCHHHHHHHHHhhhc-CcccC-cccccCCCCccccchhhccccC
Confidence 9999999999999999999999999999999999999999999875 55688 8999999999999999999873
No 3
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=100.00 E-value=3.4e-66 Score=479.18 Aligned_cols=300 Identities=33% Similarity=0.612 Sum_probs=269.2
Q ss_pred CcceEEcCCCCccCcceeeccc---CChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcC-CCCCcEEEEe
Q 041428 12 KAESFKLLSGHTIPAVGLGTWK---SGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTG-IQRKDLFVTS 87 (322)
Q Consensus 12 ~m~~~~l~tg~~vs~lglG~~~---~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~-~~R~~~~i~t 87 (322)
.|+|++|+||.+||+||||||+ .+.+++.++|++|+++|||+||||+.||+|+.+|++|++.++++ ++|+++||+|
T Consensus 5 ~m~~~~L~tg~~v~~lglGt~~~~~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~~~~~~~~R~~~~I~T 84 (324)
T 3ln3_A 5 XQHCVXLNDGHLIPALGFGTYXPXEVPXSXSLEAACLALDVGYRHVDTAYAYQVEEEIGQAIQSXIXAGVVXREDLFVTT 84 (324)
T ss_dssp -CCEEECTTSCEEESSEEECCCCTTSCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGCEEEE
T ss_pred CCceEECCCCCCcCCeeecCCcccCCChHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHhhccCCcccceeEEEe
Confidence 5999999999999999999999 67889999999999999999999999999999999999877766 6899999999
Q ss_pred cCCCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCC-CCCCC-C--ccccccHHHHHHHHHHHHHcCCccEE
Q 041428 88 KLWCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGAS-RPPKD-G--EVLEFDMEGVWREMEKLVKDGLVRDV 163 (322)
Q Consensus 88 K~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~-~~~~~-~--~~~~~~~~~~~~~L~~l~~~Gkir~i 163 (322)
|+|....+++.+++++++||++||+||||+|++|||++..++.. ++.+. + .....+..++|++|++|+++||||+|
T Consensus 85 K~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~i 164 (324)
T 3ln3_A 85 KLWCTCFRPELVXPALEXSLXXLQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDFCDTWERLEECXDAGLVXSI 164 (324)
T ss_dssp EECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHTTSEEEE
T ss_pred eeCCccCCHHHHHHHHHHHHHHhCCCcceEEEEecCccccccccccccccccccccccCCHHHHHHHHHHHHhcCCeeEE
Confidence 99988889999999999999999999999999999987543221 11110 0 11235789999999999999999999
Q ss_pred EecCCCHHHHHHHHhhcCCC--CceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCCC--------CCCCHHHH
Q 041428 164 GVCNFTLKKLNKLLNFAKTK--PSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGRD--------LIHDPTVE 233 (322)
Q Consensus 164 Gvs~~~~~~l~~~~~~~~~~--~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~~--------~~~~~~l~ 233 (322)
|||||++++++++++.+.++ |.++|++||++.++.+++++|+++||++++|+||++ |.+.. ++..+.+.
T Consensus 165 GvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-g~~~~~~~~~~~~~~~~~~l~ 243 (324)
T 3ln3_A 165 GVSNFNHRQLERILNXPGLXYXPVCNQVECHLYLNQRXLLDYCESXDIVLVAYGALGT-QRYXEWVDQNSPVLLNDPVLC 243 (324)
T ss_dssp EEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTSC-CCCTTTSCTTSCCGGGCHHHH
T ss_pred EecCCcHHHHHHHHHhcCccCCceeeEeeeCcccchHHHHHHHHHcCCEEEEecCCCC-CCcccccccCCcchhcCHHHH
Confidence 99999999999999988776 899999999999999999999999999999999998 75321 34567999
Q ss_pred HHHHhcCCCHHHHHHHHhhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCcccccccccccCCCCCccc
Q 041428 234 RIAKKLNKSPGQILLKWGIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRLLHGEILFVNSSAGPFRC 313 (322)
Q Consensus 234 ~la~~~~~s~~qlal~~~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 313 (322)
++|+++|+|++|+||+|++++|++||||+++++|+++|+++++++||+++++.|+++.++.|.+.+ ..|.+++.+||..
T Consensus 244 ~ia~~~g~t~aqvaL~w~l~~~~~~I~g~~~~~~l~en~~~~~~~L~~e~~~~l~~l~~~~r~~~~-~~~~~~~~~p~~~ 322 (324)
T 3ln3_A 244 DVAXXNXRSPALIALRYLIQRGIVPLAQSFXENEMRENLQVFGFQLSPEDMXTLDGLNXNFRYLPA-EFLVDHPEYPFVE 322 (324)
T ss_dssp HHHHHHTSCHHHHHHHHHHHTTCEEEECCSSHHHHHHHGGGGGCCCCHHHHHHHHTTCCCCCSCCC-GGGCSSTTCTTSS
T ss_pred HHHHhhCCCHHHHHHHHHHhCCCEEEeCCCCHHHHHHHHhhCCCCcCHHHHHHHHhcccCCcccCc-hhhhcCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999888 7788889999954
No 4
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=100.00 E-value=1.7e-65 Score=472.95 Aligned_cols=293 Identities=34% Similarity=0.649 Sum_probs=264.5
Q ss_pred cceEEcCCCCccCcceeecccCChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcC-CCCCcEEEEecCCC
Q 041428 13 AESFKLLSGHTIPAVGLGTWKSGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTG-IQRKDLFVTSKLWC 91 (322)
Q Consensus 13 m~~~~l~tg~~vs~lglG~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~-~~R~~~~i~tK~~~ 91 (322)
+++++|+||.+||+||||||+.+.+++.++|+.|++.|||+||||+.||+|+.+|++|+..++.| ++|+++||+||+|.
T Consensus 5 ~~~~~l~~g~~vs~lglGt~~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~~~~~~~~R~~~~i~TK~~~ 84 (317)
T 1qwk_A 5 TASIKLSNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKELLEEGVVKREELFITTKAWT 84 (317)
T ss_dssp CCEEECTTSCEEESBCEECTTCCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHHTSCCGGGCEEEEEECT
T ss_pred cceEECCCCCEeCCeeEECCcCCHHHHHHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHhhcCCCChhheEEEeeeCC
Confidence 37889999999999999999999999999999999999999999999999999999999865556 68999999999988
Q ss_pred CCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCCHH
Q 041428 92 ADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFTLK 171 (322)
Q Consensus 92 ~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~ 171 (322)
.+.+++.+++++++||++||+||||+|++|||+....+.. .....+..++|++|++|+++||||+||||||+++
T Consensus 85 ~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~------~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~ 158 (317)
T 1qwk_A 85 HELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMS------EHIASPVEDVWRQFDAVYKAGLAKAVGVSNWNND 158 (317)
T ss_dssp TTSSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTTSC------SEECCCHHHHHHHHHHHHHTTSBSSEEEESCCHH
T ss_pred CcCCHHHHHHHHHHHHHHhCCCceeEEEEeccCccccccc------cccCCCHHHHHHHHHHHHHcCCeeEEEecCCCHH
Confidence 7888999999999999999999999999999976322100 0002467899999999999999999999999999
Q ss_pred HHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCC----------------CCCCCHHHHHH
Q 041428 172 KLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGR----------------DLIHDPTVERI 235 (322)
Q Consensus 172 ~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~----------------~~~~~~~l~~l 235 (322)
+++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |.+. .++..+.+.++
T Consensus 159 ~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~~~~~~~~~~~~~~~~l~~i 237 (317)
T 1qwk_A 159 QISRALALGLTPVHNSQVELHLYFPQHDHVDFCKKHNISVTSYATLGS-PGRVNFTLPTGQKLDWAPAPSDLQDQNVLAL 237 (317)
T ss_dssp HHHHHHTTCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCS-CCEECCBCTTCCBCCCEECSSGGGCHHHHHH
T ss_pred HHHHHHHhcCCccceecceeccccCcHHHHHHHHHcCCEEEEecCccC-CCcccccccccccccccccchhhccHHHHHH
Confidence 999999998888999999999999999999999999999999999998 7431 23446899999
Q ss_pred HHhcCCCHHHHHHHHhhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCcccccccccccCCCCCccc
Q 041428 236 AKKLNKSPGQILLKWGIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRLLHGEILFVNSSAGPFRC 313 (322)
Q Consensus 236 a~~~~~s~~qlal~~~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 313 (322)
|+++|+|++|+||+|++++|+++|||+++++|+++|+++++++||+++++.|+++.++.+.+.+ ..+++++.+||..
T Consensus 238 a~~~g~s~aqvaL~w~l~~~~~vI~g~~~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~ 314 (317)
T 1qwk_A 238 AEKTHKTPAQVLLRYALDRGCAILPKSIQENRIKENFEVFDFSLTEEDIAKLEESKNSQRLFLQ-DFMTGHPEDAFAA 314 (317)
T ss_dssp HHHHTCCHHHHHHHHHHHTTCEEECCCCSHHHHHHHHCCSSCCCCHHHHHHHTTTCCCCCSCCC-GGGTTCTTCTTGG
T ss_pred HHHHCcCHHHHHHHHHHhCCCeEEeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHHhhcCccccc-hhccCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999988888888 7778888788865
No 5
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=100.00 E-value=2.8e-65 Score=471.46 Aligned_cols=299 Identities=36% Similarity=0.645 Sum_probs=265.5
Q ss_pred cceEEcCCCCccCcceeecccCChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcC-CCCCcEEEEecCCC
Q 041428 13 AESFKLLSGHTIPAVGLGTWKSGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTG-IQRKDLFVTSKLWC 91 (322)
Q Consensus 13 m~~~~l~tg~~vs~lglG~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~-~~R~~~~i~tK~~~ 91 (322)
|++++|+||.+||+||||||+.+.+++.++|++|+++|||+||||+.||+|+.+|++|++.+..+ ++|+++||+||+|.
T Consensus 2 ~~~~~l~tg~~v~~lglGt~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~~~~~~~~R~~v~I~TK~~~ 81 (316)
T 3o3r_A 2 TTFVKLRTKAKMPLVGLGTWKSPPGQVKEAVKAAIDAGYRHFDCAYVYQNESEVGEAIQEKIKEKAVRREDLFIVSKLWS 81 (316)
T ss_dssp CCEEECTTSCEEESBEEBCTTCCTTHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHHHTTSCCGGGCEEEEEECG
T ss_pred CCeEECCCCCEeCCeeeECCcCCcHHHHHHHHHHHHcCCCEEEccCccCCHHHHHHHHHHHHhhCCCChHHcEEEeeeCC
Confidence 46789999999999999999998899999999999999999999999999999999999876655 68999999999998
Q ss_pred CCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCC-CCCCC-Cc--cccccHHHHHHHHHHHHHcCCccEEEecC
Q 041428 92 ADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGAS-RPPKD-GE--VLEFDMEGVWREMEKLVKDGLVRDVGVCN 167 (322)
Q Consensus 92 ~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~-~~~~~-~~--~~~~~~~~~~~~L~~l~~~Gkir~iGvs~ 167 (322)
...+++.+++++++||++||+||||+|+||||+...++.. ++.+. +. ....+..++|++|++|+++||||+|||||
T Consensus 82 ~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn 161 (316)
T 3o3r_A 82 TFFEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLDAWEGMEELVDQGLVKALGVSN 161 (316)
T ss_dssp GGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSSCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred CcCCHHHHHHHHHHHHHHcCCCeeeEEEEcCCccccCcccccccccccccccccccHHHHHHHHHHHHHcCCCcEEEEec
Confidence 8889999999999999999999999999999985443221 11110 10 12357899999999999999999999999
Q ss_pred CCHHHHHHHHhhcCC--CCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCC-------CCCCCCHHHHHHHHh
Q 041428 168 FTLKKLNKLLNFAKT--KPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAG-------RDLIHDPTVERIAKK 238 (322)
Q Consensus 168 ~~~~~l~~~~~~~~~--~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l-------~~~~~~~~l~~la~~ 238 (322)
|+.++++++++.+.+ +|.++|++||++.++.+++++|+++||++++|+||++ |.. +.++..+.+.++|++
T Consensus 162 ~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~~~~~~~~~~~~~~~~~l~~ia~~ 240 (316)
T 3o3r_A 162 FNHFQIERLLNKPGLKHKPVTNQVECHPYLTQEKLIQYCHSKGIAVIAYSPLGS-PDRPYAKPEDPVVLEIPKIKEIAAK 240 (316)
T ss_dssp CCHHHHHHHHTCTTCCSCCCEEEEECBTTBCCHHHHHHHHTTTCEEEEECTTCC-TTCTTCCTTSCCSTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCCCCceEeeccCCcccchHHHHHHHHHcCCEEEEecccCC-CCCccccccchhhhcCHHHHHHHHH
Confidence 999999999988765 4899999999999999999999999999999999998 632 134567899999999
Q ss_pred cCCCHHHHHHHHhhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCcccccccccccCCCCCccc
Q 041428 239 LNKSPGQILLKWGIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRLLHGEILFVNSSAGPFRC 313 (322)
Q Consensus 239 ~~~s~~qlal~~~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 313 (322)
+|+|++|+||+|++++|.+||||+++++|+++|+++++++||++|++.|+++.++.|.+.. ..+-+++++||..
T Consensus 241 ~g~t~aqvaL~w~l~~~~~vi~g~~~~~~l~en~~a~~~~L~~ee~~~l~~l~~~~r~~~~-~~~~~~~~~pf~~ 314 (316)
T 3o3r_A 241 HKKTIAQVLIRFHVQRNVAVIPKSVTLSHIKENIQVFDFQLSEEDMAAILSLNRNWRACGL-FVTSDEEDFPFHE 314 (316)
T ss_dssp HTCCHHHHHHHHHHTTTCEECCBCCSHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCCCSC-GGGTTSTTCGGGS
T ss_pred hCCCHHHHHHHHHHhCCCEEeCCCCCHHHHHHHHhhCCCCcCHHHHHHHHccccCCccccc-cccccCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999888877 5666788889863
No 6
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=100.00 E-value=4.9e-65 Score=469.77 Aligned_cols=297 Identities=38% Similarity=0.705 Sum_probs=264.5
Q ss_pred ceEEcCCCCccCcceeecccCChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcC-CCCCcEEEEecCCCC
Q 041428 14 ESFKLLSGHTIPAVGLGTWKSGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTG-IQRKDLFVTSKLWCA 92 (322)
Q Consensus 14 ~~~~l~tg~~vs~lglG~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~-~~R~~~~i~tK~~~~ 92 (322)
++++|+||.+||+||||||+.+.+++.++|+.|+++|||+||||+.||+|+.+|++|+..++.| ++|+++||+||+|..
T Consensus 3 ~~~~l~tg~~v~~lglGt~~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~~~~I~TK~~~~ 82 (316)
T 1us0_A 3 SRILLNNGAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCT 82 (316)
T ss_dssp SEEECTTSCEEESBCEECTTCCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSSCGGGCEEEEEECGG
T ss_pred ceEECCCCCEECCEeEECCcCCHHHHHHHHHHHHHcCCCEEEcccccCCHHHHHHHHHHHHhcCCCChhHeEEEEeeCCC
Confidence 4788999999999999999999999999999999999999999999999999999999876666 689999999999887
Q ss_pred CCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCC-CCCCC-Cc--cccccHHHHHHHHHHHHHcCCccEEEecCC
Q 041428 93 DLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGAS-RPPKD-GE--VLEFDMEGVWREMEKLVKDGLVRDVGVCNF 168 (322)
Q Consensus 93 ~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~-~~~~~-~~--~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~ 168 (322)
+.+++.+++++++||++||+||||+|++|||+...++.. ++.+. +. ....+..++|++|++|+++||||+||||||
T Consensus 83 ~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~ 162 (316)
T 1us0_A 83 YHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNF 162 (316)
T ss_dssp GCSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTSBSCEEEESC
T ss_pred cCCHHHHHHHHHHHHHHhCCCceeeEEEecCccccccccccccccccccccccccHHHHHHHHHHHHHCCCccEEEEecC
Confidence 889999999999999999999999999999976432111 00000 00 002467899999999999999999999999
Q ss_pred CHHHHHHHHhhcCC--CCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCC-------CCCCCCHHHHHHHHhc
Q 041428 169 TLKKLNKLLNFAKT--KPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAG-------RDLIHDPTVERIAKKL 239 (322)
Q Consensus 169 ~~~~l~~~~~~~~~--~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l-------~~~~~~~~l~~la~~~ 239 (322)
++++++++++.+.+ +|+++|++||++.++.+++++|+++||++++|+||++ |.+ +.++..+.+.++|+++
T Consensus 163 ~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~~~~~~~l~~ia~~~ 241 (316)
T 1us0_A 163 NHLQVEMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGS-PDRPWAKPEDPSLLEDPRIKAIAAKH 241 (316)
T ss_dssp CHHHHHHHHTCTTCCSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC-TTCTTCCTTSCCTTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHhCcccCCceeeehhcCCccCCHHHHHHHHHcCCEEEEeccccc-CccccccCCCcccccCHHHHHHHHHh
Confidence 99999999999888 8999999999999989999999999999999999998 753 2355678999999999
Q ss_pred CCCHHHHHHHHhhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCcccccccccccCCCCCcc
Q 041428 240 NKSPGQILLKWGIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRLLHGEILFVNSSAGPFR 312 (322)
Q Consensus 240 ~~s~~qlal~~~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 312 (322)
|+|++|+||+|++++|+++|||+++++|+++|+++++++||+++++.|+++.++.+.+.+ ..+++++.+||.
T Consensus 242 g~s~aqvaL~w~l~~~~~~I~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~ 313 (316)
T 1us0_A 242 NKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCAL-LSCTSHKDYPFH 313 (316)
T ss_dssp TCCHHHHHHHHHHHTTCEECCBCCCHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCSCCC-GGGTTSTTCCCC
T ss_pred CCCHHHHHHHHHHHCCCEEEeCCCCHHHHHHHhhhcCCCCCHHHHHHHHhhccCCccccc-hhccCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999988888877 667777777876
No 7
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=100.00 E-value=2.2e-65 Score=464.49 Aligned_cols=273 Identities=34% Similarity=0.629 Sum_probs=248.1
Q ss_pred CCCCCCCCCCCCcceEEcCCCCccCcceeecccCChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcCCCC
Q 041428 1 MAQSNIEPTNHKAESFKLLSGHTIPAVGLGTWKSGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTGIQR 80 (322)
Q Consensus 1 ~~~~~~~~~~~~m~~~~l~tg~~vs~lglG~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~~~R 80 (322)
|.-|+..+ ..|++++|+||.+||+||||||+.+.+++.++|+.|++.|||+||||+.||+|+.+|++|++. +.+|
T Consensus 1 ~~~~~~~~--~~m~~~~l~~g~~v~~lglGt~~~~~~~~~~~v~~Al~~Gi~~iDTA~~Yg~E~~lG~al~~~---~~~R 75 (283)
T 2wzm_A 1 MTASHGQA--AAIPTVTLNDDNTLPVVGIGVGELSDSEAERSVSAALEAGYRLIDTAAAYGNEAAVGRAIAAS---GIPR 75 (283)
T ss_dssp -----------CCCEEECTTSCEEESEEEECTTCCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHT---CCCG
T ss_pred CCCCCCCC--CCCceEECCCCCEEcceeEECCCCChHHHHHHHHHHHHcCCCEEECCCcccCHHHHHHHHHhc---CCCc
Confidence 55565554 469999999999999999999998888999999999999999999999999999999999974 6789
Q ss_pred CcEEEEecCCCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCc
Q 041428 81 KDLFVTSKLWCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLV 160 (322)
Q Consensus 81 ~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gki 160 (322)
+++||+||+|..+.+++.+++++++||++||+||||+|++|||++. ..+..++|++|++|+++|||
T Consensus 76 ~~v~i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~--------------~~~~~e~~~al~~l~~~Gki 141 (283)
T 2wzm_A 76 DEIYVTTKLATPDQGFTSSQAAARASLERLGLDYVDLYLIHWPGGD--------------TSKYVDSWGGLMKVKEDGIA 141 (283)
T ss_dssp GGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCTTC--------------HHHHHHHHHHHHHHHHTTSE
T ss_pred ccEEEEeccCCCCCCHHHHHHHHHHHHHHhCCCCEeEEEEcCCCCC--------------CCCHHHHHHHHHHHHHcCCc
Confidence 9999999998878899999999999999999999999999999753 13468999999999999999
Q ss_pred cEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCCCCCCCHHHHHHHHhcC
Q 041428 161 RDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGRDLIHDPTVERIAKKLN 240 (322)
Q Consensus 161 r~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~~~~~~~~l~~la~~~~ 240 (322)
|+||||||++++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ | .++..+.+.++|+++|
T Consensus 142 r~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G---~l~~~~~l~~ia~~~g 217 (283)
T 2wzm_A 142 RSIGVCNFGAEDLETIVSLTYFTPAVNQIELHPLLNQAALREVNAGYNIVTEAYGPLGV-G---RLLDHPAVTAIAEAHG 217 (283)
T ss_dssp EEEEEESCCHHHHHHHHHHHCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEECTTTT-T---GGGGCHHHHHHHHHHT
T ss_pred cEEEEcCCCHHHHHHHHHhcCCCcccccccCCcccCCHHHHHHHHHCCCEEEEecCCCC-C---cccchHHHHHHHHHhC
Confidence 99999999999999999998889999999999999999999999999999999999998 7 4567789999999999
Q ss_pred CCHHHHHHHHhhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCcc
Q 041428 241 KSPGQILLKWGIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRL 296 (322)
Q Consensus 241 ~s~~qlal~~~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~ 296 (322)
+|++|+||+|++++++++|||+++++|+++|+++++++|++++++.|+++..+.+.
T Consensus 218 ~s~aqvaL~w~l~~~~~~I~g~~~~~~l~en~~~~~~~L~~~~~~~l~~~~~~~~~ 273 (283)
T 2wzm_A 218 RTAAQVLLRWSIQLGNVVISRSANPERIASNLDVFGFELTADEMETLNGLDDGTRF 273 (283)
T ss_dssp CCHHHHHHHHHHHTTCEEEECCSSHHHHHHHHCCSSCCCCHHHHHHHHTCCCCCCS
T ss_pred CCHHHHHHHHHHHCCCEEEeCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHhhcCCc
Confidence 99999999999999999999999999999999999999999999999999875443
No 8
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=100.00 E-value=4.5e-65 Score=471.33 Aligned_cols=300 Identities=33% Similarity=0.601 Sum_probs=264.1
Q ss_pred CcceEEcCCCCccCcceeecc---cCChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcC-CCCCcEEEEe
Q 041428 12 KAESFKLLSGHTIPAVGLGTW---KSGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTG-IQRKDLFVTS 87 (322)
Q Consensus 12 ~m~~~~l~tg~~vs~lglG~~---~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~-~~R~~~~i~t 87 (322)
.|++++|+||.+||+|||||| +.+.+++.++|+.|+++|||+||||+.||+|+.+|++|+..+++| ++|+++||+|
T Consensus 4 ~~~~~~L~tg~~v~~lglGt~~~g~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~~~~I~T 83 (323)
T 1afs_A 4 ISLRVALNDGNFIPVLGFGTTVPEKVAKDEVIKATKIAIDNGFRHFDSAYLYEVEEEVGQAIRSKIEDGTVKREDIFYTS 83 (323)
T ss_dssp GGCEEECTTSCEEESSEEECCCCTTSCTTHHHHHHHHHHHTTCCEEECCTTTTCHHHHHHHHHHHHHTTSCCGGGCEEEE
T ss_pred CCceEECCCCCeECCeeEecccCCCCCHHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHHHhcCCCChHHeEEEE
Confidence 588999999999999999999 567788999999999999999999999999999999999876666 6899999999
Q ss_pred cCCCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCC-CCCCC-Cc--cccccHHHHHHHHHHHHHcCCccEE
Q 041428 88 KLWCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGAS-RPPKD-GE--VLEFDMEGVWREMEKLVKDGLVRDV 163 (322)
Q Consensus 88 K~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~-~~~~~-~~--~~~~~~~~~~~~L~~l~~~Gkir~i 163 (322)
|+|....+++.+++++++||++||+||||+|+||||....++.. ++.+. +. ....+..++|++|++|+++||||+|
T Consensus 84 K~~~~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~~~~~~~~~~~~e~~~ale~l~~~Gkir~i 163 (323)
T 1afs_A 84 KLWSTFHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSI 163 (323)
T ss_dssp EECGGGCSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCCHHHHHHHHHHHHHTTSEEEE
T ss_pred ecCCCcCCHHHHHHHHHHHHHHhCCCceeEEEecCcCcCCCCcccCcccccccccccCCCHHHHHHHHHHHHHcCCcCEE
Confidence 99877788999999999999999999999999999965322110 00000 00 0024678999999999999999999
Q ss_pred EecCCCHHHHHHHHhhcCC--CCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCC--------CCCCCHHHH
Q 041428 164 GVCNFTLKKLNKLLNFAKT--KPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGR--------DLIHDPTVE 233 (322)
Q Consensus 164 Gvs~~~~~~l~~~~~~~~~--~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~--------~~~~~~~l~ 233 (322)
|||||++++++++++.+.+ +|+++|++||++.++.+++++|+++||++++|+||++ |.+. .++..+.+.
T Consensus 164 GvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~~~~~~~~l~ 242 (323)
T 1afs_A 164 GVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQSKMLDYCKSKDIILVSYCTLGS-SRDKTWVDQKSPVLLDDPVLC 242 (323)
T ss_dssp EEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTSC-CCCTTTSCTTSCCGGGCHHHH
T ss_pred EeeCCCHHHHHHHHHhcCcCCCCEEEeeccccccchHHHHHHHHHcCCEEEEecCccC-CccccccccCCcchhcCHHHH
Confidence 9999999999999998888 8999999999999999999999999999999999998 7652 234578999
Q ss_pred HHHHhcCCCHHHHHHHHhhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCcccccccccccCCCCCccc
Q 041428 234 RIAKKLNKSPGQILLKWGIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRLLHGEILFVNSSAGPFRC 313 (322)
Q Consensus 234 ~la~~~~~s~~qlal~~~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 313 (322)
++|+++|+|++|+||+|++++|+++|||+++++|+++|+++++++||+++++.|+++.++.+.+.+ ..+++++.+||..
T Consensus 243 ~ia~~~g~s~aqvaL~w~l~~~~~vI~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~ 321 (323)
T 1afs_A 243 AIAKKYKQTPALVALRYQLQRGVVPLIRSFNAKRIKELTQVFEFQLASEDMKALDGLNRNFRYNNA-KYFDDHPNHPFTD 321 (323)
T ss_dssp HHHHHTTCCHHHHHHHHHHHTTCEEEECCSCHHHHHHHTTTTSCCCCHHHHHHHHTTCCCCCSCCC-GGGTTCTTCCC--
T ss_pred HHHHHhCCCHHHHHHHHHHhCCCEEeeCCCCHHHHHHHHhhccCCCCHHHHHHHHhhcccCCccch-hhccCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999988888887 6677777778754
No 9
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=100.00 E-value=4.4e-65 Score=464.40 Aligned_cols=267 Identities=34% Similarity=0.695 Sum_probs=252.2
Q ss_pred CCcceEEcCCCCccCcceeecccC-ChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcCCCCCcEEEEecC
Q 041428 11 HKAESFKLLSGHTIPAVGLGTWKS-GDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTGIQRKDLFVTSKL 89 (322)
Q Consensus 11 ~~m~~~~l~tg~~vs~lglG~~~~-~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~~~R~~~~i~tK~ 89 (322)
..|+|++|+||++||.||||||+. +.+++.++|++|+++|||+||||+.||+|+.+|++++.. +.+|++++|+||+
T Consensus 11 ~~~~~v~Ln~G~~ip~lGlGtw~~~d~~e~~~~v~~Al~~Gin~~DTA~~YgsE~~vG~~l~~~---~~~r~~~~i~tk~ 87 (290)
T 4gie_A 11 CNYNCVTLHNSVRMPQLGLGVWRAQDGAETANAVRWAIEAGYRHIDTAYIYSNERGVGQGIRES---GVPREEVWVTTKV 87 (290)
T ss_dssp SSSCEEECTTSCEEESBCEECTTCCTTHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHH---CCCGGGSEEEEEE
T ss_pred CCCCEEEcCCCCCccceeEECCCCCCHHHHHHHHHHHHHcCCCEEecccccCCHHHHHHHHHhc---CCcchhccccccc
Confidence 369999999999999999999985 467899999999999999999999999999999999987 7789999999999
Q ss_pred CCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCC
Q 041428 90 WCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFT 169 (322)
Q Consensus 90 ~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~ 169 (322)
+....+++.++.++++||+|||+||||+|++|||+. .+..++|++|++|+++||||+||||||+
T Consensus 88 ~~~~~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~----------------~~~~e~~~al~~l~~~Gkir~iGvSn~~ 151 (290)
T 4gie_A 88 WNSDQGYEKTLAAFERSRELLGLEYIDLYLIHWPGK----------------KKFVDTWKALEKLYEEKKVRAIGVSNFE 151 (290)
T ss_dssp CGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCS----------------SSHHHHHHHHHHHHHTTSEEEEEEESCC
T ss_pred cccCCChHHHHHHHHHHHHHhCCCceeeEEecCCCC----------------CcchHHHHHHHHHHHCCCcceeeecCCC
Confidence 988889999999999999999999999999999865 3568999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCCCCCCCHHHHHHHHhcCCCHHHHHHH
Q 041428 170 LKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGRDLIHDPTVERIAKKLNKSPGQILLK 249 (322)
Q Consensus 170 ~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~~~~~~~~l~~la~~~~~s~~qlal~ 249 (322)
++++.++.+.+.+++.++|+++++..+..+++++|+++||++++|+||++ |.+......+.+.++|+++|+|++|+||+
T Consensus 152 ~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~l~~~~~~~gi~~~a~spl~~-G~l~~~~~~~~l~~iA~~~g~t~aqvaL~ 230 (290)
T 4gie_A 152 PHHLTELFKSCKIRPMVNQVELHPLFQQRTLREFCKQHNIAITAWSPLGS-GEEAGILKNHVLGEIAKKHNKSPAQVVIR 230 (290)
T ss_dssp HHHHHHHHTTCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCS-SGGGCGGGCHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHhccCCCceeeEeccccchhHHHHHHHHHcCceEeeeccccc-ccccccchhHHHHHHHHHhCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998 87766677889999999999999999999
Q ss_pred HhhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCccc
Q 041428 250 WGIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRLL 297 (322)
Q Consensus 250 ~~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~~ 297 (322)
|++++|.++|||++|++|+++|+++++++||+||+++|+++.++.|.+
T Consensus 231 w~l~~~~v~I~G~~~~~~l~eNl~a~~~~Ls~ee~~~ld~l~~~~r~~ 278 (290)
T 4gie_A 231 WDIQHGIVTIPKSTNKGRIQENFNVWDFKLTEEEMRQIDELNEDKRIG 278 (290)
T ss_dssp HHHHTTCEECCBCCSHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCCS
T ss_pred HHHhCCCEEEECCCCHHHHHHHHhhcCCCCCHHHHHHHhccCCCCCcC
Confidence 999999999999999999999999999999999999999998877763
No 10
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=100.00 E-value=1.1e-64 Score=469.40 Aligned_cols=300 Identities=34% Similarity=0.661 Sum_probs=265.6
Q ss_pred CCcceEEcCCCCccCcceeeccc----CChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcC-CCCCcEEE
Q 041428 11 HKAESFKLLSGHTIPAVGLGTWK----SGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTG-IQRKDLFV 85 (322)
Q Consensus 11 ~~m~~~~l~tg~~vs~lglG~~~----~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~-~~R~~~~i 85 (322)
..|++++|+||.+||+||||||+ .+.+++.++|+.|++.|||+||||+.||+|+.+|++|+..++.| ++|+++||
T Consensus 5 ~~~~~~~L~tg~~v~~lglGt~~~g~~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~~~~i 84 (326)
T 3buv_A 5 AASHRIPLSDGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKVRREDIFY 84 (326)
T ss_dssp SSCCEEECTTSCEEESBCEECCCCGGGCCTTHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGCEE
T ss_pred CCCCeEECCCCCeeCCeeEcccCCCCCCCHHHHHHHHHHHHHcCCCEEECccccCCHHHHHHHHHHHHhcCCCChhHeEE
Confidence 35789999999999999999998 67788999999999999999999999999999999999876666 68999999
Q ss_pred EecCCCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCC-CCCCC-Cc--cccccHHHHHHHHHHHHHcCCcc
Q 041428 86 TSKLWCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGAS-RPPKD-GE--VLEFDMEGVWREMEKLVKDGLVR 161 (322)
Q Consensus 86 ~tK~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~-~~~~~-~~--~~~~~~~~~~~~L~~l~~~Gkir 161 (322)
+||+|..+.+++.+++++++||++||+||||+|+||||+...++.. ++.+. +. ....+..++|++|++|+++||||
T Consensus 85 ~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir 164 (326)
T 3buv_A 85 CGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVK 164 (326)
T ss_dssp EEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHTTSEE
T ss_pred EeeeCCCcCCHHHHHHHHHHHHHHhCCCceeEEEEccCCccCCccccCccccccccccccccHHHHHHHHHHHHHcCCcc
Confidence 9999887889999999999999999999999999999976432111 00000 00 00246789999999999999999
Q ss_pred EEEecCCCHHHHHHHHhhcCCC--CceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCC--------CCCCCHH
Q 041428 162 DVGVCNFTLKKLNKLLNFAKTK--PSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGR--------DLIHDPT 231 (322)
Q Consensus 162 ~iGvs~~~~~~l~~~~~~~~~~--~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~--------~~~~~~~ 231 (322)
+||||||+.++++++++.+.++ |.++|++||++.++.+++++|+++||++++|+||++ |.+. .++..+.
T Consensus 165 ~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~~~~~~~~ 243 (326)
T 3buv_A 165 SLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQPKLLKFCQQHDIVITAYSPLGT-SRNPIWVNVSSPPLLKDAL 243 (326)
T ss_dssp EEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC-CCCTTTSCTTSCCGGGCHH
T ss_pred EEEEeCCCHHHHHHHHHhCCCCCCCeeeeeecccccCcHHHHHHHHHcCCEEEEeccccC-CccccccccCCccccccHH
Confidence 9999999999999999988887 999999999999989999999999999999999998 7652 2345689
Q ss_pred HHHHHHhcCCCHHHHHHHHhhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCcccccccccccCCCCCc
Q 041428 232 VERIAKKLNKSPGQILLKWGIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRLLHGEILFVNSSAGPF 311 (322)
Q Consensus 232 l~~la~~~~~s~~qlal~~~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~~~g~~~~~~~~~~~~ 311 (322)
+.++|+++|+|++|+||+|++++|+++|||+++++|+++|+++++++||+++++.|+++.++.+.|.+ ..+++++.+||
T Consensus 244 l~~ia~~~g~s~aqvaL~w~l~~~~~~I~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~~~~~-~~~~~~~~~~~ 322 (326)
T 3buv_A 244 LNSLGKRYNKTAAQIVLRFNIQRGVVVIPKSFNLERIKENFQIFDFSLTEEEMKDIEALNKNVRFVEL-LMWRDHPEYPF 322 (326)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHTTCEECCBCCSHHHHHHHHCCSSCCCCHHHHHHHHTTCCSCCSCCC-GGGTTSTTCSS
T ss_pred HHHHHHHhCCCHHHHHHHHHHhCCCEEEeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhccCCccccc-hhccCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999988888877 66777777787
Q ss_pred c
Q 041428 312 R 312 (322)
Q Consensus 312 ~ 312 (322)
.
T Consensus 323 ~ 323 (326)
T 3buv_A 323 H 323 (326)
T ss_dssp S
T ss_pred C
Confidence 6
No 11
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=100.00 E-value=5.7e-65 Score=473.22 Aligned_cols=304 Identities=64% Similarity=1.206 Sum_probs=268.1
Q ss_pred c-ceEEcCCCCccCcceeecccCChhHHHHHHHHHHH-cCCCeEecCCCcCCHHHHHHHHHHHHhcCCCCCcEEEEecCC
Q 041428 13 A-ESFKLLSGHTIPAVGLGTWKSGDEAFKSVFTAIVE-GGYRHIDTAKQYGVQENIGLALKEAMQTGIQRKDLFVTSKLW 90 (322)
Q Consensus 13 m-~~~~l~tg~~vs~lglG~~~~~~~~~~~~l~~Al~-~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~~~R~~~~i~tK~~ 90 (322)
| ++++|+||..||+||||||+.+ +++.++|+.|++ .|||+||||+.||+|+.+|++|+..++.|++|+++||+||+|
T Consensus 36 m~~~~~L~tg~~vp~lglGt~~~~-~~~~~~l~~Al~~~Gi~~iDTA~~Yg~E~~vG~al~~~~~~g~~R~~v~I~TK~~ 114 (344)
T 2bgs_A 36 EQDHFVLKSGHAMPAVGLGTWRAG-SDTAHSVRTAITEAGYRHVDTAAEYGVEKEVGKGLKAAMEAGIDRKDLFVTSKIW 114 (344)
T ss_dssp -CCEEECTTSCEEESBCEECTTCG-GGHHHHHHHHHHTTCCCEEECCGGGTCHHHHHHHHHHHHHTTCCGGGCEEEEEEC
T ss_pred CCceEECCCCCccCCeeEeCCCCc-HHHHHHHHHHHHhcCCCEEECCCccCCHHHHHHHHHHhhhcCCCcccEEEEeccC
Confidence 6 4889999999999999999987 889999999999 999999999999999999999998666677899999999998
Q ss_pred CCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCC-CCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCC
Q 041428 91 CADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGAS-RPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFT 169 (322)
Q Consensus 91 ~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~ 169 (322)
....+++.+++++++||++||+||||+|+||||+....+.. ++..++ ....+..++|++|++|+++||||+||||||+
T Consensus 115 ~~~~~~~~v~~ale~SL~rLg~dyIDl~llH~p~~~~~~~~~~~~~~~-~~~~~~~e~~~aLe~l~~~GkIr~iGvSn~~ 193 (344)
T 2bgs_A 115 CTNLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGE-VLEFDMEGVWKEMENLVKDGLVKDIGVCNYT 193 (344)
T ss_dssp GGGCSHHHHHHHHHHHHHHHTCSCEEEEEESSSCEECTTCCSSCCTTC-EECCCHHHHHHHHHHHHHTTSEEEEEEESCC
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCcccccccccccccc-ccCCCHHHHHHHHHHHHHcCCccEEEEecCC
Confidence 87889999999999999999999999999999975322110 000000 0124678999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCCCCCCCHHHHHHHHhcCCCHHHHHHH
Q 041428 170 LKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGRDLIHDPTVERIAKKLNKSPGQILLK 249 (322)
Q Consensus 170 ~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~~~~~~~~l~~la~~~~~s~~qlal~ 249 (322)
+++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |- +.++..+.+.++|+++|+|++|+||+
T Consensus 194 ~~~l~~~~~~~~i~p~v~Q~e~~~~~~~~~ll~~~~~~gI~v~a~spL~~-G~-~~~~~~~~l~~iA~~~g~s~aqvaL~ 271 (344)
T 2bgs_A 194 VTKLNRLLRSAKIPPAVCQMEMHPGWKNDKIFEACKKHGIHITAYSPLGS-SE-KNLAHDPVVEKVANKLNKTPGQVLIK 271 (344)
T ss_dssp HHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCT-TT-TCCTTCHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHhcCCCceeeecccCcccCcHHHHHHHHHCCCEEEEeCcccC-CC-chhhccHHHHHHHHHhCCCHHHHHHH
Confidence 99999999999888999999999999989999999999999999999988 41 34567789999999999999999999
Q ss_pred HhhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCccccccc-ccccCCCCCccccccCCCCC
Q 041428 250 WGIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRLLHGEI-LFVNSSAGPFRCVADLWDHE 321 (322)
Q Consensus 250 ~~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~ 321 (322)
|++++|++||||+++++|+++|+++++++||+++++.|+++.++.+.|.+ . .+..+.++||....++|+.|
T Consensus 272 w~l~~~~~vI~gs~~~~~l~eNl~a~~~~Ls~ee~~~l~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
T 2bgs_A 272 WALQRGTSVIPKSSKDERIKENIQVFGWEIPEEDFKVLCSIKDEKRVLTG-EELFVNKTHGPYRSARDVWDHE 343 (344)
T ss_dssp HHHHHTCEECCBCSSHHHHHHTTCCSSCCCCHHHHHHHHHSCTTCCSCCC-HHHHBCTTTCSBCSHHHHTTTC
T ss_pred HHHhCCCeEEECCCCHHHHHHHHHhcCCCCCHHHHHHHHHHhhcCCccch-hhhhcCCcCCCCCchhhcccCC
Confidence 99999999999999999999999999999999999999999988888877 4 44444337999888899876
No 12
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=100.00 E-value=5e-65 Score=461.99 Aligned_cols=259 Identities=39% Similarity=0.716 Sum_probs=244.7
Q ss_pred CCcceEEcCCCCccCcceeecccCChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcCCCCCcEEEEecCC
Q 041428 11 HKAESFKLLSGHTIPAVGLGTWKSGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTGIQRKDLFVTSKLW 90 (322)
Q Consensus 11 ~~m~~~~l~tg~~vs~lglG~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~~~R~~~~i~tK~~ 90 (322)
..|+|++|++|.+||+||||||+.+.+++.++|+.|++.|||+||||+.||+|+.+|++|++. +++|+++||+||++
T Consensus 24 ~~m~~~~L~~g~~v~~lglGt~~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~---~~~R~~~~i~TK~~ 100 (283)
T 3o0k_A 24 MTVPTVKLNDGNHIPQLGYGVWQISNDEAVSAVSEALKAGYRHIDTATIYGNEEGVGKAINGS---GIARADIFLTTKLW 100 (283)
T ss_dssp CCCCEEECTTSCEEESBCEECCSCCHHHHHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHTS---SSCGGGCEEEEEEC
T ss_pred CCCceEECCCCCEECCeeEECccCCHHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHc---CCCcccEEEEEccC
Confidence 369999999999999999999999999999999999999999999999999999999999865 67899999999999
Q ss_pred CCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCCH
Q 041428 91 CADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFTL 170 (322)
Q Consensus 91 ~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~ 170 (322)
..+.+++.+++++++||++||+||||+|++|||++.. .+..++|++|++|+++||||+||||||++
T Consensus 101 ~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~--------------~~~~e~~~al~~l~~~Gkir~iGvSn~~~ 166 (283)
T 3o0k_A 101 NSDQGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSK--------------DLFMETWRAFIKLKEEGRVKSIGVSNFRT 166 (283)
T ss_dssp GGGCSHHHHHHHHHHHHHHHTSSCEEEEEECCSCSCH--------------HHHHHHHHHHHHHHHTTSEEEEEEESCCH
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCceeEEEECCCCCCc--------------ccHHHHHHHHHHHHHCCCcceEEeccCcH
Confidence 8888899999999999999999999999999997631 24689999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCCCCCCCHHHHHHHHhcCCCHHHHHHHH
Q 041428 171 KKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGRDLIHDPTVERIAKKLNKSPGQILLKW 250 (322)
Q Consensus 171 ~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~~~~~~~~l~~la~~~~~s~~qlal~~ 250 (322)
++++++++.+.++|.++|++||++.++.+++++|+++||++++|+||++ | .++..+.+.++|+++|+|++|+||+|
T Consensus 167 ~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G---~l~~~~~l~~ia~~~g~t~aqvaL~w 242 (283)
T 3o0k_A 167 ADLERLIKESGVTPVLNQIELHPQFQQDELRLFHGKHDIATEAWSPLGQ-G---KLLEDPTLKSIAEKHAKSVAQIILRW 242 (283)
T ss_dssp HHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC-C----CTTCHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEeecCcccCcHHHHHHHHHCCcEEEEecCCCC-C---ccccchHHHHHHHHhCCCHHHHHHHH
Confidence 9999999988888999999999999999999999999999999999998 7 45678999999999999999999999
Q ss_pred hhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHcc
Q 041428 251 GIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSM 290 (322)
Q Consensus 251 ~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~ 290 (322)
++++|.++|||+++++|+++|+++++++||++|++.|+++
T Consensus 243 ~l~~~~v~I~g~~~~~~l~en~~a~~~~Ls~ee~~~i~~l 282 (283)
T 3o0k_A 243 HIETGNIVIPKSITPARIKENFDIFDFTLNGTDHDAITKL 282 (283)
T ss_dssp HHHHTCEECCCCCSHHHHHHHHCCSSCCCCHHHHHHHHTT
T ss_pred HHHCCCEEEeCCCCHHHHHHHHHhCCCCCCHHHHHHHhcc
Confidence 9999988999999999999999999999999999999986
No 13
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=100.00 E-value=1.7e-64 Score=457.43 Aligned_cols=263 Identities=39% Similarity=0.724 Sum_probs=248.3
Q ss_pred CCcceEEcCCCCccCcceeecccCC-hhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcCCCCCcEEEEecC
Q 041428 11 HKAESFKLLSGHTIPAVGLGTWKSG-DEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTGIQRKDLFVTSKL 89 (322)
Q Consensus 11 ~~m~~~~l~tg~~vs~lglG~~~~~-~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~~~R~~~~i~tK~ 89 (322)
..|+|++|+||.+||+||||||+.+ .+++.++|+.|+++|||+||||+.||+|+.+|++|++. +.+|+++||+||+
T Consensus 4 ~~m~~~~L~~g~~v~~lglGt~~~~~~~~~~~~l~~Al~~G~~~~DTA~~Yg~E~~lG~al~~~---~~~R~~~~i~TK~ 80 (276)
T 3f7j_A 4 SLKDTVKLHNGVEMPWFGLGVFKVENGNEATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKES---GVAREELFITSKV 80 (276)
T ss_dssp STTCEEECTTSCEEESBCEECTTCCTTHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHH---CSCGGGCEEEEEE
T ss_pred CCcceEECCCCCEecceeecCCcCCCHHHHHHHHHHHHHcCCCEEECcCcccCHHHHHHHHhhc---CCCcccEEEEEee
Confidence 4599999999999999999999964 58899999999999999999999999999999999976 6789999999999
Q ss_pred CCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCC
Q 041428 90 WCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFT 169 (322)
Q Consensus 90 ~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~ 169 (322)
+..+.+++.+++++++||++||+||||+|++|||++. ...++|++|++|+++||||+||||||+
T Consensus 81 ~~~~~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~~~----------------~~~~~~~~l~~l~~~Gkir~iGvSn~~ 144 (276)
T 3f7j_A 81 WNEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKD----------------KYKDTWRALEKLYKDGKIRAIGVSNFQ 144 (276)
T ss_dssp CGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSS----------------SHHHHHHHHHHHHHTTSEEEEEEESCC
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCeeEEEEEecCCCC----------------cHHHHHHHHHHHHHcCCccEEEeccCC
Confidence 9888899999999999999999999999999999763 268999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCCCCCCCHHHHHHHHhcCCCHHHHHHH
Q 041428 170 LKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGRDLIHDPTVERIAKKLNKSPGQILLK 249 (322)
Q Consensus 170 ~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~~~~~~~~l~~la~~~~~s~~qlal~ 249 (322)
+++++++++.+.++|.++|++||++.++.+++++|+++||++++|+||++ |. ++..+.+.++|+++|+|++|+||+
T Consensus 145 ~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~---l~~~~~l~~ia~~~g~t~aqval~ 220 (276)
T 3f7j_A 145 VHHLEELLKDAEIKPMVNQVEFHPRLTQKELRDYCKGQGIQLEAWSPLMQ-GQ---LLDNEVLTQIAEKHNKSVAQVILR 220 (276)
T ss_dssp HHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGG-GT---TTTCHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHhcCCCceeeeeeeccccCCHHHHHHHHHCCCEEEEecCCCC-Cc---cCCCHHHHHHHHHhCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998 73 567799999999999999999999
Q ss_pred HhhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCcc
Q 041428 250 WGIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRL 296 (322)
Q Consensus 250 ~~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~ 296 (322)
|++++|.++|||+++++|+++|+++++++||++|++.|+++.++.|.
T Consensus 221 w~l~~~~v~i~g~~~~~~l~en~~a~~~~L~~e~~~~l~~l~~~~r~ 267 (276)
T 3f7j_A 221 WDLQHGVVTIPKSIKEHRIIENADIFDFELSQEDMDKIDALNKDERV 267 (276)
T ss_dssp HHHHTTCEECCBCCSHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCS
T ss_pred HHHhCCCEEeeCCCCHHHHHHHHhhCCCCCCHHHHHHHHhhccCCcc
Confidence 99999999999999999999999999999999999999999886665
No 14
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=100.00 E-value=2.5e-64 Score=467.65 Aligned_cols=299 Identities=35% Similarity=0.656 Sum_probs=262.4
Q ss_pred CcceEEcCCCCccCcceeecc---cCChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcC-CCCCcEEEEe
Q 041428 12 KAESFKLLSGHTIPAVGLGTW---KSGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTG-IQRKDLFVTS 87 (322)
Q Consensus 12 ~m~~~~l~tg~~vs~lglG~~---~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~-~~R~~~~i~t 87 (322)
.+++++|+||.+||+|||||| +.+.+++.++|+.|++.|||+||||+.||+|+.+|++|+..++.| ++|+++||+|
T Consensus 4 ~~~~~~L~tg~~v~~lglGt~~~~~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~~~~~R~~~~I~T 83 (331)
T 1s1p_A 4 KQQCVKLNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTS 83 (331)
T ss_dssp --CEEECTTSCEEESEEEECCCCTTSCTTHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGCEEEE
T ss_pred CCCeEECCCCCEeCCeeEcCccCCCCCHHHHHHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHHhcCCCCchheEEEe
Confidence 467899999999999999999 567788999999999999999999999999999999999876666 6899999999
Q ss_pred cCCCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCC-CCCCC-Cc--cccccHHHHHHHHHHHHHcCCccEE
Q 041428 88 KLWCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGAS-RPPKD-GE--VLEFDMEGVWREMEKLVKDGLVRDV 163 (322)
Q Consensus 88 K~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~-~~~~~-~~--~~~~~~~~~~~~L~~l~~~Gkir~i 163 (322)
|+|....+++.+++++++||++||+||||+|+||||....++.. ++.+. +. ....+..++|++|++|+++||||+|
T Consensus 84 K~~~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~ale~l~~~Gkir~i 163 (331)
T 1s1p_A 84 KLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSI 163 (331)
T ss_dssp EECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCCHHHHHHHHHHHHHTTSEEEE
T ss_pred ccCCccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCcccCCCcccCCccccccccccccCHHHHHHHHHHHHHcCCccEE
Confidence 99887889999999999999999999999999999965422111 00000 00 0124678999999999999999999
Q ss_pred EecCCCHHHHHHHHhhcCC--CCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCC--------CCCCCHHHH
Q 041428 164 GVCNFTLKKLNKLLNFAKT--KPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGR--------DLIHDPTVE 233 (322)
Q Consensus 164 Gvs~~~~~~l~~~~~~~~~--~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~--------~~~~~~~l~ 233 (322)
|||||++++++++++.+.+ +|+++|++||++.++.+++++|+++||++++|+||++ |.+. .++..+.+.
T Consensus 164 GvSn~~~~~l~~~~~~~~~~~~p~v~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~~~~~~~~l~ 242 (331)
T 1s1p_A 164 GVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGS-QRDKRWVDPNSPVLLEDPVLC 242 (331)
T ss_dssp EEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTSC-CCCTTTSCTTSCCGGGCHHHH
T ss_pred EEeCCCHHHHHHHHHhcCccCCCceeeeecCCCcChHHHHHHHHHcCCEEEEeccccC-CcccccccCCCcccccCHHHH
Confidence 9999999999999999888 8999999999999999999999999999999999998 7652 234568999
Q ss_pred HHHHhcCCCHHHHHHHHhhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCcccccccccccCCCCCcc
Q 041428 234 RIAKKLNKSPGQILLKWGIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRLLHGEILFVNSSAGPFR 312 (322)
Q Consensus 234 ~la~~~~~s~~qlal~~~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 312 (322)
++|+++|+|++|+||+|++++|+++|||+++++|+++|+++++++||+++++.|+++.++.+.+++ ..+++.+.+||.
T Consensus 243 ~ia~~~g~s~aqvaL~w~l~~~~~vI~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~ 320 (331)
T 1s1p_A 243 ALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTAEDMKAIDGLDRNLHYFNS-DSFASHPNYPYS 320 (331)
T ss_dssp HHHHHHTSCHHHHHHHHHHHTTCEEEEECCSHHHHHHHGGGGGCCCCHHHHHHHHTTCCCCCSCCC-HHHHTSTTCCCC
T ss_pred HHHHHhCCCHHHHHHHHHHhCCCEEeeCCCCHHHHHHHhhhcCCCcCHHHHHHHHHHhcCCcccch-hhccCCCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999988788777 667777666664
No 15
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=5.5e-64 Score=454.88 Aligned_cols=264 Identities=39% Similarity=0.686 Sum_probs=246.9
Q ss_pred CCCcceEEcCCCCccCcceeecccCCh-hHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcCCCCCcEEEEec
Q 041428 10 NHKAESFKLLSGHTIPAVGLGTWKSGD-EAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTGIQRKDLFVTSK 88 (322)
Q Consensus 10 ~~~m~~~~l~tg~~vs~lglG~~~~~~-~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~~~R~~~~i~tK 88 (322)
-..|++++|+||.+||+||||||+.+. +++.++|+.|++.|||+||||+.||+|+.+|++|+.. +++|+++||+||
T Consensus 6 ~~~m~~~~l~~g~~v~~lglGt~~~~~~~~~~~~v~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~---~~~R~~~~i~TK 82 (281)
T 1vbj_A 6 MALTQSLKLSNGVMMPVLGFGMWKLQDGNEAETATMWAIKSGYRHIDTAAIYKNEESAGRAIASC---GVPREELFVTTK 82 (281)
T ss_dssp TCCCCEEECTTSCEEESBCEECTTCCTTHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHS---SSCGGGCEEEEE
T ss_pred CCCCceEECCCCCeecCeeEECCcCCCHHHHHHHHHHHHHcCCCEEECCcccCCHHHHHHHHHhc---CCChhHEEEEec
Confidence 346999999999999999999999754 7889999999999999999999999999999999974 668999999999
Q ss_pred CCCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCC
Q 041428 89 LWCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNF 168 (322)
Q Consensus 89 ~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~ 168 (322)
++..+.+++.+++++++||++||+||||+|++|||+ . .+..++|++|++|+++||||+||||||
T Consensus 83 ~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~-~---------------~~~~~~~~al~~l~~~Gkir~iGvSn~ 146 (281)
T 1vbj_A 83 LWNSDQGYESTLSAFEKSIKKLGLEYVDLYLIHWPG-K---------------DKFIDTWKAFEKLYADKKVRAIGVSNF 146 (281)
T ss_dssp ECGGGCSHHHHHHHHHHHHHHHTCSCBSEEEESCCC-S---------------SCHHHHHHHHHHHHHTTSBSCEEEESC
T ss_pred cCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-C---------------CCHHHHHHHHHHHHHCCCccEEEeeCC
Confidence 988788899999999999999999999999999997 2 357899999999999999999999999
Q ss_pred CHHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCCCCCCCHHHHHHHHhcCCCHHHHHH
Q 041428 169 TLKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGRDLIHDPTVERIAKKLNKSPGQILL 248 (322)
Q Consensus 169 ~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~~~~~~~~l~~la~~~~~s~~qlal 248 (322)
++++++++++.+.++|.++|++||++.++.+++++|+++||++++|+||++ | .++..+.+.++|+++|+|++|+||
T Consensus 147 ~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G---~~~~~~~l~~ia~~~g~s~aqvaL 222 (281)
T 1vbj_A 147 HEHHIEELLKHCKVAPMVNQIELHPLLNQKALCEYCKSKNIAVTAWSPLGQ-G---HLVEDARLKAIGGKYGKTAAQVML 222 (281)
T ss_dssp CHHHHHHHHTSCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTGG-G---TTTTCHHHHHHHHTTTCCHHHHHH
T ss_pred CHHHHHHHHHhCCCCceeeeEEeccccCCHHHHHHHHHcCCEEEEecCCcC-C---CCCCCHHHHHHHHHhCCCHHHHHH
Confidence 999999999988888999999999999999999999999999999999998 7 356788999999999999999999
Q ss_pred HHhhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCcc
Q 041428 249 KWGIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRL 296 (322)
Q Consensus 249 ~~~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~ 296 (322)
+|++++++++|||+++++|+++|+++++++||+++++.|+++..+.+.
T Consensus 223 ~w~l~~~~~~I~g~~~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~~~ 270 (281)
T 1vbj_A 223 RWEIQAGVITIPKSGNEARIKENGNIFDFELTAEDIQVIDGMNAGHRY 270 (281)
T ss_dssp HHHHHTTCEECCBCSCHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCS
T ss_pred HHHHHCCCEEecCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhccCCc
Confidence 999999999999999999999999999999999999999999875443
No 16
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=100.00 E-value=4.8e-64 Score=464.31 Aligned_cols=285 Identities=35% Similarity=0.666 Sum_probs=253.4
Q ss_pred CCcceEEcCCCCccCcceeecccCChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcC-CCCCcEEEEecC
Q 041428 11 HKAESFKLLSGHTIPAVGLGTWKSGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTG-IQRKDLFVTSKL 89 (322)
Q Consensus 11 ~~m~~~~l~tg~~vs~lglG~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~-~~R~~~~i~tK~ 89 (322)
..|++++|+||.+||+||||||+.+.+++.++|+.|++.|||+||||+.||+|+.+|++|+..++.| ++|+++||+||+
T Consensus 3 ~~m~~~~L~tg~~v~~lglGt~~~~~~~~~~~v~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~~~~i~TK~ 82 (322)
T 1mi3_A 3 ASIPDIKLSSGHLMPSIGFGCWKLANATAGEQVYQAIKAGYRLFDGAEDYGNEKEVGDGVKRAIDEGLVKREEIFLTSKL 82 (322)
T ss_dssp -CCCEEECTTSCEEESBCEECTTCCHHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHHHTTSCCGGGCEEEEEE
T ss_pred CCCceEECCCCCEECCeeeeCCcCCHHHHHHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHhhcCCCChhhEEEEEee
Confidence 3589999999999999999999999999999999999999999999999999999999999876666 689999999999
Q ss_pred CCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCC--CCCC-CCCC-----CCcc--ccccHHHHHHHHHHHHHcCC
Q 041428 90 WCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLK--EGAS-RPPK-----DGEV--LEFDMEGVWREMEKLVKDGL 159 (322)
Q Consensus 90 ~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~--~~~~-~~~~-----~~~~--~~~~~~~~~~~L~~l~~~Gk 159 (322)
|....+++.+++++++||++||+||||+|++|||.... .+.. ++.+ ++.. ...+..++|++|++|+++||
T Consensus 83 ~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gk 162 (322)
T 1mi3_A 83 WNNYHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGK 162 (322)
T ss_dssp CGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCCBCCCCHHHHHHHHHHHHHTTS
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCeeeEEEecCcccccCcccccccccccccccccccccCCCHHHHHHHHHHHHHcCC
Confidence 88788999999999999999999999999999996532 1110 0000 0000 02467899999999999999
Q ss_pred ccEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCC-----------CCCCCC
Q 041428 160 VRDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGA-----------GRDLIH 228 (322)
Q Consensus 160 ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~-----------l~~~~~ 228 (322)
||+||||||+.++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |. .+.++.
T Consensus 163 ir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~~~~~~~~~~~~~~~~~~ 241 (322)
T 1mi3_A 163 IKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQPKLIEFAQKAGVTITAYSSFGP-QSFVEMNQGRALNTPTLFA 241 (322)
T ss_dssp EEEEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEECTTTT-HHHHTTTCHHHHTSCCTTS
T ss_pred cCEEEEcCCCHHHHHHHHHhCCCCceEeecccCcCcCcHHHHHHHHHcCCEEEEECCCCC-CCcccccccccccCccccc
Confidence 999999999999999999998888999999999999989999999999999999999997 61 234566
Q ss_pred CHHHHHHHHhcCCCHHHHHHHHhhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCcc
Q 041428 229 DPTVERIAKKLNKSPGQILLKWGIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRL 296 (322)
Q Consensus 229 ~~~l~~la~~~~~s~~qlal~~~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~ 296 (322)
.+.+.++|+++|+|++|+||+|++++|+++|||+++++|+++|+++++++||+++++.|+++.++.+.
T Consensus 242 ~~~l~~iA~~~g~t~aqvaL~w~l~~~~~vI~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~~ 309 (322)
T 1mi3_A 242 HDTIKAIAAKYNKTPAEVLLRWAAQRGIAVIPKSNLPERLVQNRSFNTFDLTKEDFEEIAKLDIGLRF 309 (322)
T ss_dssp CHHHHHHHHHHTCCHHHHHHHHHHTTTCEECCCCCSHHHHHHTTSCCSSCCCHHHHHHHHTTCCCCCS
T ss_pred CHHHHHHHHHcCCCHHHHHHHHHHhCCCEEEcCCCCHHHHHHHHhhcCCCcCHHHHHHHHhhcccCcc
Confidence 78999999999999999999999999999999999999999999999999999999999999876554
No 17
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=100.00 E-value=4e-64 Score=462.82 Aligned_cols=299 Identities=37% Similarity=0.702 Sum_probs=259.7
Q ss_pred CCcceEE-cCC--CCccCcceeec--ccCChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcC-CCCCcEE
Q 041428 11 HKAESFK-LLS--GHTIPAVGLGT--WKSGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTG-IQRKDLF 84 (322)
Q Consensus 11 ~~m~~~~-l~t--g~~vs~lglG~--~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~-~~R~~~~ 84 (322)
..|++++ |++ |.+||+||||| |+.+.+++.++|+.|++.|||+||||+.||+|+.+|++|+..++.| ++|+++|
T Consensus 4 ~~m~~~~~l~~~tg~~v~~lglGt~~~~~~~~~~~~~v~~Al~~G~~~iDTA~~YgsE~~vG~al~~~~~~g~~~R~~~~ 83 (312)
T 1zgd_A 4 VEIPTKVLTNTSSQLKMPVVGMGSAPDFTCKKDTKDAIIEAIKQGYRHFDTAAAYGSEQALGEALKEAIELGLVTRDDLF 83 (312)
T ss_dssp -CCCEEECTTSTTCCEEESBCBCCSCCTTCCSCHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGCE
T ss_pred CCCchhhhcCCCCCCCCCceeEcCcccCCCHHHHHHHHHHHHHcCCCEEECccccCCHHHHHHHHHHHHhcCCCcchheE
Confidence 3589999 865 99999999999 8887788999999999999999999999999999999999866666 5899999
Q ss_pred EEecCCCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCC-CCCCCCccccccHHHHHHHHHHHHHcCCccEE
Q 041428 85 VTSKLWCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGAS-RPPKDGEVLEFDMEGVWREMEKLVKDGLVRDV 163 (322)
Q Consensus 85 i~tK~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~i 163 (322)
|+||+|..+.+++.+++++++||++||+||||+|++|||+...++.. ++.........+..++|++|++|+++||||+|
T Consensus 84 i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~i 163 (312)
T 1zgd_A 84 VTSKLWVTENHPHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFDVKGVWESMEESLKLGLTKAI 163 (312)
T ss_dssp EEEEECGGGCSGGGHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCCCSSEEGGGEECCCHHHHHHHHHHHHHTTSBSCE
T ss_pred EEeccCCCCCCHHHHHHHHHHHHHHhCCCceeEEEEeccCcccCccccccccccccccccHHHHHHHHHHHHHcCCCCEE
Confidence 99999887888999999999999999999999999999976432110 00000011124678999999999999999999
Q ss_pred EecCCCHHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCC---CCCCCCHHHHHHHHhcC
Q 041428 164 GVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAG---RDLIHDPTVERIAKKLN 240 (322)
Q Consensus 164 Gvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l---~~~~~~~~l~~la~~~~ 240 (322)
|||||+.++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |.+ +.++..+.+.++|+++|
T Consensus 164 GvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~~~~~~~~~~~~~l~~ia~~~g 242 (312)
T 1zgd_A 164 GVSNFSVKKLENLLSVATVLPAVNQVEMNLAWQQKKLREFCNAHGIVLTAFSPVRK-GASRGPNEVMENDMLKEIADAHG 242 (312)
T ss_dssp EEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTTT-TTTTSSCTTTTCHHHHHHHHHHT
T ss_pred EEeCCCHHHHHHHHHhCCCCceEEeeecCcccCCHHHHHHHHHcCCEEEEecCCCC-CCCCCCccccccHHHHHHHHHcC
Confidence 99999999999999998888999999999999999999999999999999999997 743 24566789999999999
Q ss_pred CCHHHHHHHHhhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCcccccccccccCCCCCccccccCCCC
Q 041428 241 KSPGQILLKWGIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRLLHGEILFVNSSAGPFRCVADLWDH 320 (322)
Q Consensus 241 ~s~~qlal~~~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 320 (322)
+|++|+||+|++++++++|||+++++|+++|+++++++||+++++.|+++..+.+. .| .+ +| +-+++|||
T Consensus 243 ~s~aqvaL~w~l~~~~~~I~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~~-~~-~~------~~--~~~~~~~~ 312 (312)
T 1zgd_A 243 KSVAQISLRWLYEQGVTFVPKSYDKERMNQNLRIFDWSLTKEDHEKIAQIKQNRLI-PG-PT------KP--GLNDLYDD 312 (312)
T ss_dssp SCHHHHHHHHHHHTTCEECCCCCSHHHHHHTTCCSSCCCCHHHHHHHTTSCCCCSC-CC-SE------ES--CCTTTTCC
T ss_pred CCHHHHHHHHHHHCCCEEEeCCCCHHHHHHHHHhccCCCCHHHHHHHHHHhccCcc-CC-CC------CC--ChHHhccC
Confidence 99999999999999999999999999999999999999999999999999876444 55 22 12 44578876
No 18
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=100.00 E-value=3.3e-64 Score=455.99 Aligned_cols=264 Identities=32% Similarity=0.630 Sum_probs=242.2
Q ss_pred CcceEEcCCCCccCcceeecccCChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcCCCCCcEEEEecCCC
Q 041428 12 KAESFKLLSGHTIPAVGLGTWKSGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTGIQRKDLFVTSKLWC 91 (322)
Q Consensus 12 ~m~~~~l~tg~~vs~lglG~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~ 91 (322)
.|+|++|+||.+||+||||||+.+.+++.++|+.|++.|||+||||+.||+|+.+|++|+.. +++|+++||+||+|.
T Consensus 2 ~M~~~~l~~g~~v~~lglGt~~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~---~~~R~~~~i~TK~~~ 78 (278)
T 1hw6_A 2 TVPSIVLNDGNSIPQLGYGVFKVPPADTQRAVEEALEVGYRHIDTAAIYGNEEGVGAAIAAS---GIARDDLFITTKLWN 78 (278)
T ss_dssp CCCEEECTTSCEEESBCEECCSCCGGGHHHHHHHHHHHTCCEEECGGGTTCCHHHHHHHHHH---CCCGGGCEEEEEECC
T ss_pred CCceEECCCCCccCCeeEECCcCChHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHc---CCChhhEEEEEeeCC
Confidence 38999999999999999999998888999999999999999999999999999999999975 678999999999998
Q ss_pred CCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCCHH
Q 041428 92 ADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFTLK 171 (322)
Q Consensus 92 ~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~ 171 (322)
.+.+++.+++++++||++||+||||+|++|||++. ..+..++|++|++|+++||||+||||||+++
T Consensus 79 ~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~--------------~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~ 144 (278)
T 1hw6_A 79 DRHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPA--------------ADNYVHAWEKMIELRAAGLTRSIGVSNHLVP 144 (278)
T ss_dssp C-----CHHHHHHHHHHHHTCSCEEEEEECCCCTT--------------CSSHHHHHHHHHHHHHTTSEEEEEEESCCHH
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCEEEEEEcCCCCC--------------CCCHHHHHHHHHHHHHcCCccEEEecCCCHH
Confidence 88889999999999999999999999999999763 1357899999999999999999999999999
Q ss_pred HHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCCCCCCCHHHHHHHHhcCCCHHHHHHHHh
Q 041428 172 KLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGRDLIHDPTVERIAKKLNKSPGQILLKWG 251 (322)
Q Consensus 172 ~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~~~~~~~~l~~la~~~~~s~~qlal~~~ 251 (322)
+++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |. ..++..+.+.++|+++|+|++|+||+|+
T Consensus 145 ~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~-~~~~~~~~l~~ia~~~g~s~aqvaL~w~ 222 (278)
T 1hw6_A 145 HLERIVAATGVVPAVNQIELHPAYQQREITDWAAAHDVKIESWGPLGQ-GK-YDLFGAEPVTAAAAAHGKTPAQAVLRWH 222 (278)
T ss_dssp HHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTGG-GS-SCCTTSHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHhcCCCceeEEEEeCcccCCHHHHHHHHHcCCEEEEeccccC-CC-ccccccHHHHHHHHHhCCCHHHHHHHHH
Confidence 999999998888999999999999999999999999999999999997 63 2356789999999999999999999999
Q ss_pred hhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCC
Q 041428 252 IHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQK 294 (322)
Q Consensus 252 l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~ 294 (322)
+++++++|||+++++|+++|+++++++||+++++.|+++..+.
T Consensus 223 l~~~v~~I~g~~~~~~l~en~~~~~~~L~~~~~~~l~~~~~~~ 265 (278)
T 1hw6_A 223 LQKGFVVFPKSVRRERLEENLDVFDFDLTDTEIAAIDAMDPGD 265 (278)
T ss_dssp HHTTCBBCCCCCSHHHHHHHHCCSSCCCCHHHHHHHHTTCC--
T ss_pred HHCCCEEEcCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhccC
Confidence 9999999999999999999999999999999999999997643
No 19
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=100.00 E-value=4.3e-64 Score=457.52 Aligned_cols=270 Identities=34% Similarity=0.641 Sum_probs=246.6
Q ss_pred cceEEcCCCCccCcceeecccCC-hhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcCCCCCcEEEEecCCC
Q 041428 13 AESFKLLSGHTIPAVGLGTWKSG-DEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTGIQRKDLFVTSKLWC 91 (322)
Q Consensus 13 m~~~~l~tg~~vs~lglG~~~~~-~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~ 91 (322)
+++++|+||.+||+||||||+.+ .+++.++|+.|+++|||+||||+.||+|+.+|++|+.. +++|+++||+||++.
T Consensus 10 ~~~~~l~~g~~v~~lglGt~~~~~~~~~~~~v~~Al~~G~~~~DTA~~Yg~E~~vG~al~~~---~~~R~~~~I~TK~~~ 86 (288)
T 4f40_A 10 KAMVTLSNGVKMPQFGLGVWQSPAGEVTENAVKWALCAGYRHIDTAAIYKNEESVGAGLRAS---GVPREDVFITTKLWN 86 (288)
T ss_dssp TCEEECTTSCEEESBCEECTTCCTTHHHHHHHHHHHHTTCCEEECCGGGTCHHHHHHHHHHH---TCCGGGCEEEEEECG
T ss_pred CCeEECCCCCeecceeEECCcCCCcHHHHHHHHHHHHcCCCeEECcccccCHHHHHHHHHhc---CCChhhEEEEEecCC
Confidence 67899999999999999999976 48899999999999999999999999999999999976 678999999999998
Q ss_pred CCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCCHH
Q 041428 92 ADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFTLK 171 (322)
Q Consensus 92 ~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~ 171 (322)
.+.+++.+++++++||++||+||||+|++|||+..... .....+..++|++|++|+++||||+||||||+++
T Consensus 87 ~~~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~~~~~~--------~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~ 158 (288)
T 4f40_A 87 TEQGYESTLAAFEESRQKLGVDYIDLYLIHWPRGKDIL--------SKEGKKYLDSWRAFEQLYKEKKVRAIGVSNFHIH 158 (288)
T ss_dssp GGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCCHHHH--------HHHCCHHHHHHHHHHHHHHTTSEEEEEEESCCHH
T ss_pred CcCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCCCccc--------ccccccHHHHHHHHHHHHHcCCccEEEeccCCHH
Confidence 88899999999999999999999999999999753100 0001356899999999999999999999999999
Q ss_pred HHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCCCCCCCHHHHHHHHhcCCCHHHHHHHHh
Q 041428 172 KLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGRDLIHDPTVERIAKKLNKSPGQILLKWG 251 (322)
Q Consensus 172 ~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~~~~~~~~l~~la~~~~~s~~qlal~~~ 251 (322)
+++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ | .++..+.+.++|+++|+|++|+||+|+
T Consensus 159 ~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G---~l~~~~~l~~ia~~~g~t~aqvaL~w~ 234 (288)
T 4f40_A 159 HLEDVLAMCTVTPMVNQVELHPLNNQADLRAFCDAKQIKVEAWSPLGQ-G---KLLSNPILSAIGAKYNKTAAQVILRWN 234 (288)
T ss_dssp HHHHHHTTCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTC------CGGGCHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHhCCCCCeEEeccCccccCCHHHHHHHHHCCCEEEEecCCCC-C---cccccHHHHHHHHHhCCCHHHHHHHHH
Confidence 999999998888999999999999999999999999999999999998 7 356678999999999999999999999
Q ss_pred hhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCccc
Q 041428 252 IHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRLL 297 (322)
Q Consensus 252 l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~~ 297 (322)
+++|+++|||+++++|+++|+++++++||++|++.|+++.++.+.+
T Consensus 235 l~~~~~~i~g~~~~~~l~en~~~~~~~L~~ee~~~i~~l~~~~r~~ 280 (288)
T 4f40_A 235 IQKNLITIPKSVHRERIEENADIFDFELGAEDVMSIDALNTNSRYG 280 (288)
T ss_dssp HHTTCEECCBCSSHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCSS
T ss_pred HhCCCeEeeCCCCHHHHHHHhhhcCCCCCHHHHHHHHhhccCCccc
Confidence 9999999999999999999999999999999999999998866653
No 20
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=100.00 E-value=8.7e-64 Score=463.18 Aligned_cols=284 Identities=39% Similarity=0.750 Sum_probs=255.8
Q ss_pred cceEEcCCCCccCcceeecccCChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcC--CCCCcEEEEecCC
Q 041428 13 AESFKLLSGHTIPAVGLGTWKSGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTG--IQRKDLFVTSKLW 90 (322)
Q Consensus 13 m~~~~l~tg~~vs~lglG~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~--~~R~~~~i~tK~~ 90 (322)
.++++|+||.+||.||||||+.+.+++.++|++|+++|||+||||+.||+|+.+|++|++....+ +.|+++++.+|++
T Consensus 2 ~~~v~LntG~~vp~iGlGtw~~~~~~a~~~i~~Al~~Gin~~DTA~~YgsE~~vG~al~~~~~~~~~~~r~~~~~~~~~~ 81 (324)
T 4gac_A 2 ASSVLLHTGQKMPLIGLGTWKSEPGQVKAAIKHALSAGYRHIDCASVYGNETEIGEALKESVGSGKAVPREELFVTSKLW 81 (324)
T ss_dssp CCEEECTTSCEEESBCEECTTCCHHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHBSTTSSBCGGGCEEEEEEC
T ss_pred CCeEECCCCCEeccceeECCCCCHHHHHHHHHHHHHcCCCEEECCcccCCHHHHHHHHHhhhcccceecccccccccccC
Confidence 46789999999999999999999999999999999999999999999999999999999865443 6799999999999
Q ss_pred CCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCC-CCC-C--CCccccccHHHHHHHHHHHHHcCCccEEEec
Q 041428 91 CADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGAS-RPP-K--DGEVLEFDMEGVWREMEKLVKDGLVRDVGVC 166 (322)
Q Consensus 91 ~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~-~~~-~--~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs 166 (322)
..+.+++.+++++++||+|||+||||+|++|||++...+.. +.. . .......+.+++|++|++|+++||||+||||
T Consensus 82 ~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvS 161 (324)
T 4gac_A 82 NTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTHYKETWKALEVLVAKGLVKALGLS 161 (324)
T ss_dssp GGGCSHHHHHHHHHHHHHHHTCSCBSEEEESCSSEECSSSCSSCBCTTSCBCEECCCHHHHHHHHHHHHHTTSBSCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCccceeeeccCcccccccccccccccCccccCCCCHHHHHHHHHHHHHCCCeeEecCC
Confidence 88899999999999999999999999999999986543222 110 1 1122346789999999999999999999999
Q ss_pred CCCHHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCC-------CCCCCCHHHHHHHHhc
Q 041428 167 NFTLKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAG-------RDLIHDPTVERIAKKL 239 (322)
Q Consensus 167 ~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l-------~~~~~~~~l~~la~~~ 239 (322)
||++++++++...+.+.+.++|++++++.++.+++++|+++||.+++|+||++ |.+ +.+...+.+.++|+++
T Consensus 162 n~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~l~~~~~~~gi~~~a~spL~~-g~~~~~~~~~~~~~~~~~l~~iA~~~ 240 (324)
T 4gac_A 162 NFNSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCHARGLEVTAYSPLGS-SDRAWRHPDEPVLLEEPVVLALAEKH 240 (324)
T ss_dssp SCCHHHHHHHHHHCSSCCCEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTCC-GGGGGGSTTSCCGGGCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCCCcceeeeccCchhhHHHHHHHHHHhceeeeecCCccc-CccccCCCCCcchhhHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999998 755 2344568899999999
Q ss_pred CCCHHHHHHHHhhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCccc
Q 041428 240 NKSPGQILLKWGIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRLL 297 (322)
Q Consensus 240 ~~s~~qlal~~~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~~ 297 (322)
|+|++|+||+|++++|.+||||+++++|+++|++++++.||+||+++|+++.++.|.+
T Consensus 241 g~t~aqvaL~w~l~~~~v~I~G~~~~~~l~eN~~a~~~~Ls~ee~~~id~l~~~~R~~ 298 (324)
T 4gac_A 241 GRSPAQILLRWQVQRKVICIPKSINPSRILQNIQVFDFTFSPEEMKQLDALNKNWRYI 298 (324)
T ss_dssp TCCHHHHHHHHHHHTTCEECCBCCCHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCCC
T ss_pred CCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHhhCCCCCCHHHHHHHhccCcCCCcc
Confidence 9999999999999999999999999999999999999999999999999999887764
No 21
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=100.00 E-value=8.7e-64 Score=459.01 Aligned_cols=262 Identities=39% Similarity=0.729 Sum_probs=247.6
Q ss_pred CcceEEcCCCCccCcceeecccC-ChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcCCCCCcEEEEecCC
Q 041428 12 KAESFKLLSGHTIPAVGLGTWKS-GDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTGIQRKDLFVTSKLW 90 (322)
Q Consensus 12 ~m~~~~l~tg~~vs~lglG~~~~-~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~~~R~~~~i~tK~~ 90 (322)
.|+|++|+||.+||+||||||+. +.+++.++|++|++.|||+||||+.||+|+.+|++|++. +++|+++||+||+|
T Consensus 39 ~m~~~~L~~g~~v~~lglGt~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~---~~~R~~v~I~TK~~ 115 (310)
T 3b3e_A 39 LKDTVKLHNGVEMPWFGLGVFKVENGNEATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKES---GVAREELFITSKVW 115 (310)
T ss_dssp TTCEEECTTSCEEESBCEECTTCCTTHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHS---SSCGGGCEEEEEEC
T ss_pred ccceEECCCCCeeCceeeeCCcCCCHHHHHHHHHHHHHcCCCEEECCCccCCHHHHHHHHHhc---CCCcceEEEEEeCC
Confidence 59999999999999999999996 458899999999999999999999999999999999975 67899999999999
Q ss_pred CCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCCH
Q 041428 91 CADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFTL 170 (322)
Q Consensus 91 ~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~ 170 (322)
..+.+++.+++++++||++||+||||+|++|||++. ...++|++|++|+++||||+||||||++
T Consensus 116 ~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~----------------~~~e~~~al~~l~~~Gkir~iGvSn~~~ 179 (310)
T 3b3e_A 116 NEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKD----------------KYKDTWRALEKLYKDGKIRAIGVSNFQV 179 (310)
T ss_dssp GGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSS----------------CHHHHHHHHHHHHHTTSEEEEEEESCCH
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCeeEEEEeeCCCcc----------------cHHHHHHHHHHHHHcCCcceEeecCCCH
Confidence 888899999999999999999999999999999763 2689999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCCCCCCCHHHHHHHHhcCCCHHHHHHHH
Q 041428 171 KKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGRDLIHDPTVERIAKKLNKSPGQILLKW 250 (322)
Q Consensus 171 ~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~~~~~~~~l~~la~~~~~s~~qlal~~ 250 (322)
++++++++.+.++|.++|++||++.++.+++++|+++||++++|+||++ |. ++..+.+.++|+++|+|++|+||+|
T Consensus 180 ~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~---l~~~~~l~~iA~~~g~t~aqvaL~w 255 (310)
T 3b3e_A 180 HHLEELLKDAEIKPMVNQVEFHPRLTQKELRDYCKGQGIQLEAWSPLMQ-GQ---LLDNEVLTQIAEKHNKSVAQVILRW 255 (310)
T ss_dssp HHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGG-GT---TTTCHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHhcCCCcceeeeeccCccCCHHHHHHHHHcCCEEEEeccccC-CC---cCCCHHHHHHHHHhCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998 73 5667999999999999999999999
Q ss_pred hhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCcc
Q 041428 251 GIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRL 296 (322)
Q Consensus 251 ~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~ 296 (322)
++++|.++|||+++++|+++|+++++++||++|++.|+++.++.+.
T Consensus 256 ~l~~~~v~I~gs~~~~~l~en~~a~~~~Ls~ee~~~l~~l~~~~r~ 301 (310)
T 3b3e_A 256 DLQHGVVTIPKSIKEHRIIENADIFDFELSQEDMDKIDALNKDERV 301 (310)
T ss_dssp HHHTTCEECCBCCSHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCS
T ss_pred HHcCCCeEEeCCCCHHHHHHHHHhccCCCCHHHHHHHHhhhhCCcc
Confidence 9999999999999999999999999999999999999999886655
No 22
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.2e-64 Score=459.48 Aligned_cols=260 Identities=25% Similarity=0.544 Sum_probs=246.0
Q ss_pred CCCcceEEcCCCCccCcceeecccCChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcCCCCCcEEEEecC
Q 041428 10 NHKAESFKLLSGHTIPAVGLGTWKSGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTGIQRKDLFVTSKL 89 (322)
Q Consensus 10 ~~~m~~~~l~tg~~vs~lglG~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~~~R~~~~i~tK~ 89 (322)
.+.|+|++|+ |.+||+||||||+.+.+++.++|+.|++.|||+||||+.||+|+.+|++|++. +++|+++||+||+
T Consensus 21 ~~~m~~~~l~-g~~v~~lglGt~~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~---~~~R~~v~I~TK~ 96 (298)
T 3up8_A 21 QSMMHAVSSN-GANIPALGFGTFRMSGAEVLRILPQALKLGFRHVDTAQIYGNEAEVGEAIQKS---GIPRADVFLTTKV 96 (298)
T ss_dssp GGSCCEECCT-TCCEESEEEECTTCCHHHHHHHHHHHHHHTCCEEECCTTTTCHHHHHHHHHHH---TCCGGGCEEEEEE
T ss_pred hccCceEEeC-CeecCCeeEECCcCCHHHHHHHHHHHHHcCCCEEECCCcccCHHHHHHHHHHc---CCChHHEEEEecc
Confidence 3468999999 99999999999999999999999999999999999999999999999999986 7789999999999
Q ss_pred CCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCC
Q 041428 90 WCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFT 169 (322)
Q Consensus 90 ~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~ 169 (322)
+..+.+++.+++++++||++||+||||+|++|||++. .+..++|++|++|+++||||+||||||+
T Consensus 97 ~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~---------------~~~~e~~~al~~l~~~Gkir~iGvSn~~ 161 (298)
T 3up8_A 97 WVDNYRHDAFIASVDESLRKLRTDHVDLLLLHWPGSD---------------VPMAERIGALNEVRNAGKVRHIGISNFN 161 (298)
T ss_dssp CGGGCSHHHHHHHHHHHHHHHTSSCEEEEEESCSCCS---------------SCHHHHHHHHHHHHHTTSEEEEEEESCC
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCCCC---------------CCHHHHHHHHHHHHHcCCccEEEEcCCC
Confidence 9888899999999999999999999999999999874 4578999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCCCCCCCHHHHHHHHhcCCCHHHHHHH
Q 041428 170 LKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGRDLIHDPTVERIAKKLNKSPGQILLK 249 (322)
Q Consensus 170 ~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~~~~~~~~l~~la~~~~~s~~qlal~ 249 (322)
+++++++++.++++|+++|++||++.++.+++++|+++||++++|+||++ | .++..+.+.++|+++|+|++|+||+
T Consensus 162 ~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G---~l~~~~~l~~ia~~~g~s~aqvaL~ 237 (298)
T 3up8_A 162 TTQMEEAARLSDAPIATNQVEYHPYLDQTKVLQTARRLGMSLTSYYAMAN-G---KVPADPLLTEIGGRHGKTAAQVALR 237 (298)
T ss_dssp HHHHHHHHHHCSSCEEEEEEECBTTBCCHHHHHHHHHHTCEEEEECTTGG-G---HHHHCHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHhCCCCceEEEEecccccccHHHHHHHHHCCCEEEEECCCcC-C---cccccchHHHHHHHcCCCHHHHHHH
Confidence 99999999998888999999999999999999999999999999999998 7 3456789999999999999999999
Q ss_pred HhhhcC-CEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHcccc
Q 041428 250 WGIHRG-TSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTD 292 (322)
Q Consensus 250 ~~l~~~-~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~ 292 (322)
|++++| +++|||+++++|+++|+++++++||++|++.|+++.+
T Consensus 238 w~l~~p~v~~I~g~~~~~~l~en~~a~~~~L~~ee~~~l~~l~~ 281 (298)
T 3up8_A 238 WLVQQQDVIVLSKTATEARLKENFAIFDFALTREEMAAVRELAR 281 (298)
T ss_dssp HHHTSTTEEEEECCCSHHHHHHHHCCSSCCCCHHHHHHHHTTCC
T ss_pred HHHHCCCcEEEECCCCHHHHHHHHHhCCCCCCHHHHHHHHHHhc
Confidence 999995 7899999999999999999999999999999999944
No 23
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=4.1e-63 Score=451.72 Aligned_cols=265 Identities=35% Similarity=0.711 Sum_probs=246.1
Q ss_pred CCcceEEcCCCCccCcceeecccCChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcCCCCCcEEEEecCC
Q 041428 11 HKAESFKLLSGHTIPAVGLGTWKSGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTGIQRKDLFVTSKLW 90 (322)
Q Consensus 11 ~~m~~~~l~tg~~vs~lglG~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~~~R~~~~i~tK~~ 90 (322)
..|++++|+||.+||+||||||+.+.+++.++|+.|++.|||+||||+.||+|+.+|++|++. +.+|+++||+||++
T Consensus 23 ~~~~~~~L~tg~~vs~lglGt~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~---~~~R~~v~I~TK~~ 99 (296)
T 1mzr_A 23 ANPTVIKLQDGNVMPQLGLGVWQASNEEVITAIQKALEVGYRSIDTAAAYKNEEGVGKALKNA---SVNREELFITTKLW 99 (296)
T ss_dssp CCCCEEECTTSCEEESBCEECCSCCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHS---CSCGGGCEEEEEEC
T ss_pred CCCceEECCCCCeeCCEeEECCCCCHHHHHHHHHHHHHcCCCEEECCccccCHHHHHHHHHhc---CCCcccEEEEeccC
Confidence 379999999999999999999999889999999999999999999999999999999999974 67899999999998
Q ss_pred CCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCCH
Q 041428 91 CADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFTL 170 (322)
Q Consensus 91 ~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~ 170 (322)
..+. +.+++++++||++||+||||+|++|||++. ..+..++|++|++|+++||||+||||||++
T Consensus 100 ~~~~--~~v~~~~e~SL~rLg~dyiDl~llH~p~~~--------------~~~~~e~~~al~~l~~~Gkir~iGvSn~~~ 163 (296)
T 1mzr_A 100 NDDH--KRPREALLDSLKKLQLDYIDLYLMHWPVPA--------------IDHYVEAWKGMIELQKEGLIKSIGVCNFQI 163 (296)
T ss_dssp GGGT--TCHHHHHHHHHHHHTCSCEEEEEESCCCTT--------------TCCHHHHHHHHHHHHHTTSEEEEEEESCCH
T ss_pred CCcH--HHHHHHHHHHHHHhCCCcEEEEEEccCCCC--------------cCCHHHHHHHHHHHHHCCCcCEEEEeCCCH
Confidence 6554 899999999999999999999999999753 135789999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCCCCCCCHHHHHHHHhcCCCHHHHHHHH
Q 041428 171 KKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGRDLIHDPTVERIAKKLNKSPGQILLKW 250 (322)
Q Consensus 171 ~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~~~~~~~~l~~la~~~~~s~~qlal~~ 250 (322)
++++++++.+.++|.++|++||++.++.+++++|+++||++++|+||++ |.+ .++..+.+.++|+++|+|++|+||+|
T Consensus 164 ~~l~~~~~~~~~~p~v~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~~-~~l~~~~l~~ia~~~g~s~aqvaL~w 241 (296)
T 1mzr_A 164 HHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQ-GGK-GVFDQKVIRDLADKYGKTPAQIVIRW 241 (296)
T ss_dssp HHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTTT-TCT-TTTTSHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHhcCCCceEEeeecccccCCHHHHHHHHHCCCeEEEeccccC-Ccc-hhcChHHHHHHHHHhCCCHHHHHHHH
Confidence 9999999988888999999999999999999999999999999999998 743 35677899999999999999999999
Q ss_pred hhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCcc
Q 041428 251 GIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRL 296 (322)
Q Consensus 251 ~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~ 296 (322)
+++++++||||+++++|+++|+++++++||+++++.|+++....+.
T Consensus 242 ~l~~~v~vI~g~~~~~~l~enl~a~~~~Ls~e~~~~l~~~~~~~~~ 287 (296)
T 1mzr_A 242 HLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKRL 287 (296)
T ss_dssp HHHTTCEECCBCCCHHHHHHTTCCSSCCCCHHHHHHHHTTCCCCCC
T ss_pred HHhCCCEEEeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhhcCCc
Confidence 9999999999999999999999999999999999999999875443
No 24
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=2.1e-62 Score=451.41 Aligned_cols=266 Identities=37% Similarity=0.714 Sum_probs=248.4
Q ss_pred CcceEEcCCCCccCcceeecccC-ChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhc-CCCCCcEEEEecC
Q 041428 12 KAESFKLLSGHTIPAVGLGTWKS-GDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQT-GIQRKDLFVTSKL 89 (322)
Q Consensus 12 ~m~~~~l~tg~~vs~lglG~~~~-~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~-~~~R~~~~i~tK~ 89 (322)
.-.+++|+||.+||.||||||+. +.+++.++|++|+++|||+||||+.||+|+.+|++++..+.. ++.|+++++.||+
T Consensus 39 ~~~~~TLn~G~~ip~lGlGt~~~~d~~e~~~~v~~Al~~Gi~~~DTA~~YgnE~~vG~~l~~~~~~~~i~r~~~~i~~k~ 118 (314)
T 3b3d_A 39 LQAKATLHNGVEMPWFGLGVFQVEEGSELVNAVKTAIVHGYRSIDTAAIYGNEAGVGEGIREGIEEAGISREDLFITSKV 118 (314)
T ss_dssp TTCEEECTTSCEEESBCEECCSCCCSHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHHHTCCGGGCEEEEEE
T ss_pred cCCcEECCCcCcccceeEECCCCCCHHHHHHHHHHHHHcCCCEEECccccCChHHHHHHHHHHHHHhCCCcccccccccC
Confidence 44678999999999999999996 457899999999999999999999999999999999876543 5899999999999
Q ss_pred CCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCC
Q 041428 90 WCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFT 169 (322)
Q Consensus 90 ~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~ 169 (322)
+..+.+++.+++++++||+|||+||||+|++|||++ ....++|++|++|+++||||+||||||+
T Consensus 119 ~~~~~~~~~~~~~~e~SL~rL~~dyiDL~~~H~~~~----------------~~~~e~~~al~~l~~~Gkir~iGvSn~~ 182 (314)
T 3b3d_A 119 WNADLGYEETLAAFETSLSKLGLDYLDLYLIHWPVE----------------GKYKEAWRALETLYKEGRIKAIGVSNFQ 182 (314)
T ss_dssp CGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESSCCT----------------TTHHHHHHHHHHHHHTTSEEEEEEESCC
T ss_pred cCCCCCHHHHHHHHHHHHHHhCCCcccccccccccc----------------cchhHHHHHHHHHHHCCCEeEEEecCCc
Confidence 998999999999999999999999999999999875 3568999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCCCCCCCHHHHHHHHhcCCCHHHHHHH
Q 041428 170 LKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGRDLIHDPTVERIAKKLNKSPGQILLK 249 (322)
Q Consensus 170 ~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~~~~~~~~l~~la~~~~~s~~qlal~ 249 (322)
.++++++++.+.+++.++|+++++...+.+++++|+++||++++|+||++ | .+.....+.++|+++|+|++|+||+
T Consensus 183 ~~~l~~~~~~~~i~~~~nq~~~~~~~~~~~ll~~c~~~gI~v~a~sPL~~-G---~L~~~~~~~~ia~~~g~t~aqvaL~ 258 (314)
T 3b3d_A 183 IHHLEDLMTAAEIKPMINQVEFHPRLTQKELIRYCQNQGIQMEAWSPLMQ-G---QLLDHPVLADIAQTYNKSVAQIILR 258 (314)
T ss_dssp HHHHHHHTTTCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGG-G---TTTTCHHHHHHHHHTTCCHHHHHHH
T ss_pred hHHHHHHHHhcCCCeEEEEeccccccchHHHHHHHHHcCCEEEEeccccC-C---cccCchhhHHHHHHcCCCHHHHHHH
Confidence 99999999999999999999999888889999999999999999999998 7 4567789999999999999999999
Q ss_pred HhhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCccc
Q 041428 250 WGIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKRLL 297 (322)
Q Consensus 250 ~~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~~~ 297 (322)
|++++|.++|||+++++|+++|+++++++||+||+++|+++.++.|.+
T Consensus 259 w~l~~~~v~I~G~~~~~~l~eNl~a~~~~Ls~ee~~~ld~l~~~~r~~ 306 (314)
T 3b3d_A 259 WDLQHGIITIPKSTKEHRIKENASVFDFELTQDDMNRIDALNENLRVG 306 (314)
T ss_dssp HHHHTTCEECCBCCCHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCCS
T ss_pred HHHhCCCEEEECCCCHHHHHHHHHhcCCCCCHHHHHHHhccCCCCCCC
Confidence 999999999999999999999999999999999999999999877764
No 25
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=100.00 E-value=9e-62 Score=443.28 Aligned_cols=262 Identities=34% Similarity=0.681 Sum_probs=243.0
Q ss_pred ceEEcCCCCccCcceeecccCChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcC-CCCCcEEEEecCCCC
Q 041428 14 ESFKLLSGHTIPAVGLGTWKSGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTG-IQRKDLFVTSKLWCA 92 (322)
Q Consensus 14 ~~~~l~tg~~vs~lglG~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~-~~R~~~~i~tK~~~~ 92 (322)
+++.++||.+||+||||||+.+.+++.++|+.|++.|||+||||+.||+|+.+|++|++.++.+ ++|+++||+||++..
T Consensus 16 ~~~~~~tg~~v~~lglGt~~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~~~~~~~~R~~v~I~TK~~~~ 95 (298)
T 1vp5_A 16 PKVTLNNGVEMPILGYGVFQIPPEKTEECVYEAIKVGYRLIDTAASYMNEEGVGRAIKRAIDEGIVRREELFVTTKLWVS 95 (298)
T ss_dssp CEEECTTSCEEESBCEECTTCCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG
T ss_pred ceEeCCCCCCccCeeEeCCcCChHHHHHHHHHHHHcCCCEEECCCcccCHHHHHHHHHHhhhccCCChhhEEEEeccCCC
Confidence 3445599999999999999998889999999999999999999999999999999999755443 689999999999877
Q ss_pred CCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCCHHH
Q 041428 93 DLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFTLKK 172 (322)
Q Consensus 93 ~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~ 172 (322)
+.+++.+++++++||++||+||||+|++|||++ +..++|++|++|+++||||+||||||++++
T Consensus 96 ~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~-----------------~~~e~~~al~~l~~~Gkir~iGvSn~~~~~ 158 (298)
T 1vp5_A 96 DVGYESTKKAFEKSLKKLQLEYIDLYLIHQPFG-----------------DVHCAWKAMEEMYKDGLVRAIGVSNFYPDR 158 (298)
T ss_dssp GCSSHHHHHHHHHHHHHHTCSCEEEEEECSSCS-----------------CHHHHHHHHHHHHHTTSEEEEEEESCCHHH
T ss_pred CCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCC-----------------CHHHHHHHHHHHHHcCCccEEEecCCCHHH
Confidence 788999999999999999999999999999864 257999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCCCCCCCHHHHHHHHhcCCCHHHHHHHHhh
Q 041428 173 LNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGRDLIHDPTVERIAKKLNKSPGQILLKWGI 252 (322)
Q Consensus 173 l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~~~~~~~~l~~la~~~~~s~~qlal~~~l 252 (322)
++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |. ..++..+.+.++|+++|+|++|+||+|++
T Consensus 159 l~~~~~~~~~~p~v~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~-~~~l~~~~l~~ia~~~g~s~aqvaL~w~l 236 (298)
T 1vp5_A 159 LMDLMVHHEIVPAVNQIEIHPFYQRQEEIEFMRNYNIQPEAWGPFAE-GR-KNIFQNGVLRSIAEKYGKTVAQVILRWLT 236 (298)
T ss_dssp HHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTGG-GG-GGGGGCHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHhCCCCceEEEEecccccCCHHHHHHHHHCCCEEEEeccccc-CC-ccccCcHHHHHHHHHhCCCHHHHHHHHHH
Confidence 99999998889999999999999999999999999999999999987 62 13556789999999999999999999999
Q ss_pred hcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCC
Q 041428 253 HRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQK 294 (322)
Q Consensus 253 ~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~ 294 (322)
++++++|||+++++|+++|+++++++||+++++.|+++.+..
T Consensus 237 ~~~v~vI~g~~~~~~l~enl~a~~~~Ls~e~~~~l~~~~~~~ 278 (298)
T 1vp5_A 237 QKGIVAIPKTVRRERMKENISIFDFELTQEDMEKIATLDEGQ 278 (298)
T ss_dssp HTTCEECCCCSCHHHHHHHHCCSSCCCCHHHHHHHHTTCCSS
T ss_pred hCCCEEEeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhccc
Confidence 999999999999999999999999999999999999997754
No 26
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=100.00 E-value=1.1e-61 Score=450.46 Aligned_cols=279 Identities=38% Similarity=0.664 Sum_probs=247.8
Q ss_pred CCCCccCcceeecccCChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhc---CCCCCcEEEEecCCCCCCC
Q 041428 19 LSGHTIPAVGLGTWKSGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQT---GIQRKDLFVTSKLWCADLS 95 (322)
Q Consensus 19 ~tg~~vs~lglG~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~---~~~R~~~~i~tK~~~~~~~ 95 (322)
+||..||+||||||+.+.+++.++|+.|++.|||+||||+.||+|+.+|++|++.++. |++|+++||+||++..+.+
T Consensus 20 ~tg~~vp~lGlGt~~~~~~~~~~~v~~Al~~Gi~~~DTA~~YgsE~~vG~al~~~~~~~~~g~~R~~v~I~TK~~~~~~~ 99 (334)
T 3krb_A 20 GSMQYPPRLGFGTWQAPPEAVQTAVETALMTGYRHIDCAYVYQNEEAIGRAFGKIFKDASSGIKREDVWITSKLWNYNHR 99 (334)
T ss_dssp -CCSSCCSBCEECTTCCHHHHHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHHHHHCTTSSCCGGGCEEEEEECGGGCS
T ss_pred CCCCccCCeeeeCCCCCHHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHHhhhccCCCChhhEEEEeeeCCCCCC
Confidence 7899999999999999999999999999999999999999999999999999987777 7799999999999988889
Q ss_pred hHHHHHHHHHHHHHhCCCccceeEeecCCCCC--CCCC-CCCCC---CccccccHHHHHHHHHHHHHcCCccEEEecCCC
Q 041428 96 PDRVRSALNNTLQELQLDYLDLYLIHWPFRLK--EGAS-RPPKD---GEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFT 169 (322)
Q Consensus 96 ~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~--~~~~-~~~~~---~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~ 169 (322)
++.+++++++||++||+||||+|++|||.... ++.. .+.+. ......+..++|++|++|+++||||+||||||+
T Consensus 100 ~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~ 179 (334)
T 3krb_A 100 PELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLADTWRAMEQLVEEGLVKHIGVSNYT 179 (334)
T ss_dssp GGGHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCTTCCSSCBCTTSCBCBCCCCHHHHHHHHHHHHHHTSEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHcCCCceeEEEEccccccccccccccCcccccccccccCCCHHHHHHHHHHHHHcCCccEEEEecCC
Confidence 99999999999999999999999999996642 1111 01010 011125689999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCC----------CCCCCHHHHHHHHhc
Q 041428 170 LKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGR----------DLIHDPTVERIAKKL 239 (322)
Q Consensus 170 ~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~----------~~~~~~~l~~la~~~ 239 (322)
+++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |+|. .++..+.+.++|+++
T Consensus 180 ~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~c~~~gI~v~ayspL~~-G~L~~~~~~~~~~~~~~~~~~l~~iA~~~ 258 (334)
T 3krb_A 180 VPLLADLLNYAKIKPLVNQIEIHPWHPNDATVKFCLDNGIGVTAYSPMGG-SYADPRDPSGTQKNVILECKTLKAIADAK 258 (334)
T ss_dssp HHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC-SBC-------CCBCGGGGCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCceEEeeeecCcccccHHHHHHHHHcCCEEEEEecCCC-CcccCCCCCCCcccchhccHHHHHHHHHh
Confidence 99999999999889999999999999999999999999999999999998 7652 345578999999999
Q ss_pred CCCHHHHHH-----HHhhhcCCEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCC--ccccc
Q 041428 240 NKSPGQILL-----KWGIHRGTSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQK--RLLHG 299 (322)
Q Consensus 240 ~~s~~qlal-----~~~l~~~~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~--~~~~g 299 (322)
|+|++|+|| +|+++ +++||||++|++|+++|+++++++||++|++.|+++.++. |.|..
T Consensus 259 g~s~aqvaLaw~~~~w~l~-~~~vI~gs~~~~~l~en~~a~~~~Ls~ee~~~l~~l~~~~~~r~~~~ 324 (334)
T 3krb_A 259 GTSPHCVALAWHVKKWNTS-MYSVIPKSQTPARIEANFKCTEVQLSDDDMDAINNIHLNKRIRFCDP 324 (334)
T ss_dssp TSCHHHHHHHHHHHHSCST-TEEECCBCSSHHHHHHHGGGGGCCCCHHHHHHHHHHHHHCCCCCSCH
T ss_pred CcCHHHhHHhhHhhhhhcC-CeEEeeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCcccCCC
Confidence 999999999 88888 8899999999999999999999999999999999998765 55444
No 27
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=100.00 E-value=1.3e-60 Score=440.42 Aligned_cols=262 Identities=23% Similarity=0.299 Sum_probs=238.9
Q ss_pred CcceEEc-CCCCccCcceeecccC-----ChhHHHHHHHHHHHcCCCeEecCCCcC---CHHHHHHHHHHHHhcCCCCCc
Q 041428 12 KAESFKL-LSGHTIPAVGLGTWKS-----GDEAFKSVFTAIVEGGYRHIDTAKQYG---VQENIGLALKEAMQTGIQRKD 82 (322)
Q Consensus 12 ~m~~~~l-~tg~~vs~lglG~~~~-----~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~e~~lG~~l~~~~~~~~~R~~ 82 (322)
-|++++| ++|.+||+||||||++ +.+++.++|+.|++.|||+||||+.|| ||+.+|++|++. +.+|++
T Consensus 22 ~M~~~~Lg~~~~~vs~lglGt~~~g~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~~~R~~ 98 (319)
T 1ur3_M 22 LVQRITIAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLA---PHLRER 98 (319)
T ss_dssp CCCEEECSTTCCEEESSEEECTTTTTTTCCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHC---GGGTTT
T ss_pred hCceEECCCCCcccccccEeccccCCCCCCHHHHHHHHHHHHHcCCCeEEcccccCCCcHHHHHHHHHHhC---CCCCCe
Confidence 4899999 6778999999999985 578899999999999999999999999 899999999974 457999
Q ss_pred EEEEecCCC------------CCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHH
Q 041428 83 LFVTSKLWC------------ADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWRE 150 (322)
Q Consensus 83 ~~i~tK~~~------------~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (322)
+||+||++. .+.+++.+++++++||++||+||||+|++|||++. .+..++|++
T Consensus 99 v~I~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~---------------~~~~e~~~a 163 (319)
T 1ur3_M 99 MEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPL---------------MDADEVADA 163 (319)
T ss_dssp CEEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTT---------------CCHHHHHHH
T ss_pred EEEEEeeccCCCCCcccccccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCC---------------CCHHHHHHH
Confidence 999999963 15789999999999999999999999999999764 457899999
Q ss_pred HHHHHHcCCccEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCCcH---HHHHHHHHcCceEEEeccCCCCCCCCCCC
Q 041428 151 MEKLVKDGLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWRND---KILEACKKNGIHVTAYSPLGSQGAGRDLI 227 (322)
Q Consensus 151 L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~---~ll~~~~~~gi~via~~pl~~~G~l~~~~ 227 (322)
|++|+++||||+||||||++++++++.+.++.+|+++|++||+++++. +++++|+++||++++|+||++ |.| +
T Consensus 164 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~ll~~~~~~gi~v~a~spL~~-G~L---~ 239 (319)
T 1ur3_M 164 FKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGG-GRL---F 239 (319)
T ss_dssp HHHHHHTTSBCCEEEESCCHHHHHHHHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHTCCCEEECCCTT-TCS---S
T ss_pred HHHHHHCCCccEEEecCCCHHHHHHHHHhcCCCcEEEEccCchhhCchhhHHHHHHHHHcCCeEEEeccccC-ccc---c
Confidence 999999999999999999999999999988778999999999999873 499999999999999999998 754 2
Q ss_pred CC-------HHHHHHHHhcCCCH-HHHHHHHhhhcC--CEEecCCCCHHHHHHhHhccCCCCCHHHHHHHHccccCCc
Q 041428 228 HD-------PTVERIAKKLNKSP-GQILLKWGIHRG--TSVIPKSTHPDRIKENIKAFGWEIPEHDFQTLCSMTDQKR 295 (322)
Q Consensus 228 ~~-------~~l~~la~~~~~s~-~qlal~~~l~~~--~~~i~g~~~~~~l~~nl~a~~~~L~~ee~~~l~~~~~~~~ 295 (322)
.. +.+.++|+++|+|+ +|+||+|++++| ++||||+++++|+++|+++++++||++++++|+++..+.+
T Consensus 240 ~~~~~~~~~~~l~~ia~~~g~t~~aqvaL~w~l~~~~~~~~I~G~~~~~~l~en~~a~~~~Ls~ee~~~l~~~~~~~~ 317 (319)
T 1ur3_M 240 NDDYFQPLRDELAVVAEELNAGSIEQVVNAWVLRLPSQPLPIIGSGKIERVRAAVEAETLKMTRQQWFRIRKAALGYD 317 (319)
T ss_dssp SCGGGHHHHHHHHHHHHHTTCSCHHHHHHHHHHTSTTCCEEEECCSCHHHHHHHHGGGGCCCCHHHHHHHHHHHHSSC
T ss_pred CCchhHHHHHHHHHHHHHcCCChHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhccCCCCHHHHHHHHHHhcCCC
Confidence 22 78999999999999 999999999997 7999999999999999999999999999999999877544
No 28
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=100.00 E-value=1.8e-60 Score=441.40 Aligned_cols=265 Identities=25% Similarity=0.370 Sum_probs=237.2
Q ss_pred CcceEEc-CCCCccCcceeecc-----cCChhHHHHHHHHHHHcCCCeEecCCCcC---CHHHHHHHHHHHHhcCCCCCc
Q 041428 12 KAESFKL-LSGHTIPAVGLGTW-----KSGDEAFKSVFTAIVEGGYRHIDTAKQYG---VQENIGLALKEAMQTGIQRKD 82 (322)
Q Consensus 12 ~m~~~~l-~tg~~vs~lglG~~-----~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~e~~lG~~l~~~~~~~~~R~~ 82 (322)
.|.|++| +||++||+|||||| ..+.+++.++|++|+++|||+||||+.|| +|+.+|++|+.. +.+|++
T Consensus 2 ~m~yr~lG~tg~~vs~iglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~~~R~~ 78 (327)
T 3eau_A 2 LQFYRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKK---GWRRSS 78 (327)
T ss_dssp CCSEEESTTSSCEEESEEEECTTCCCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHH---TCCGGG
T ss_pred cchhcccCCCCCcccceeecCccccCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHHhc---CCccCe
Confidence 5999999 89999999999998 35778899999999999999999999997 499999999986 678999
Q ss_pred EEEEecCCC-------CCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHH
Q 041428 83 LFVTSKLWC-------ADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLV 155 (322)
Q Consensus 83 ~~i~tK~~~-------~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~ 155 (322)
+||+||++. .+.+++.+++++++||++||+||||+|++|||++. .+.+++|++|++|+
T Consensus 79 v~I~TK~~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~---------------~~~~e~~~al~~l~ 143 (327)
T 3eau_A 79 LVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPN---------------TPMEETVRAMTHVI 143 (327)
T ss_dssp CEEEEEESBCCSSGGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTT---------------SCHHHHHHHHHHHH
T ss_pred EEEEEeecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEEeCCCCC---------------CCHHHHHHHHHHHH
Confidence 999999842 13578999999999999999999999999999864 56889999999999
Q ss_pred HcCCccEEEecCCCHHHHHHHHhhc----CCCCceeceeeCCCCCc---HHHHHHHHHcCceEEEeccCCCCCCCCCCCC
Q 041428 156 KDGLVRDVGVCNFTLKKLNKLLNFA----KTKPSVCQMEMHPGWRN---DKILEACKKNGIHVTAYSPLGSQGAGRDLIH 228 (322)
Q Consensus 156 ~~Gkir~iGvs~~~~~~l~~~~~~~----~~~~~~~q~~~~~~~~~---~~ll~~~~~~gi~via~~pl~~~G~l~~~~~ 228 (322)
++||||+||||||++++++++...+ .++|+++|++||++++. .+++++|+++||++++|+||++ |+|..-+.
T Consensus 144 ~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~Ltg~~~ 222 (327)
T 3eau_A 144 NQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLAC-GIVSGKYD 222 (327)
T ss_dssp HTTSEEEEEEESCCHHHHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEEECTTGG-GGGGTTTT
T ss_pred HcCCeeEEeecCCCHHHHHHHHHHHHHcCCCCceeecccccccccchhHhhHHHHHHHcCCeEEEeccccC-ceecCccc
Confidence 9999999999999999999988764 36789999999999886 3699999999999999999998 87611100
Q ss_pred --------------------------------CHHHHHHHHhcCCCHHHHHHHHhhhcC--CEEecCCCCHHHHHHhHhc
Q 041428 229 --------------------------------DPTVERIAKKLNKSPGQILLKWGIHRG--TSVIPKSTHPDRIKENIKA 274 (322)
Q Consensus 229 --------------------------------~~~l~~la~~~~~s~~qlal~~~l~~~--~~~i~g~~~~~~l~~nl~a 274 (322)
.+.+.++|+++|+|++|+||+|+++++ .+||||+++++|+++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~a 302 (327)
T 3eau_A 223 SGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGA 302 (327)
T ss_dssp TSCCTTSGGGSTTCHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHSSTTCCEEEECCSSHHHHHHHHGG
T ss_pred CCCCCCcccccccccccccccccchhHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHhCCCCceEEeCCCCHHHHHHHHHH
Confidence 157889999999999999999999996 5799999999999999999
Q ss_pred cCC--CCCHHHHHHHHccccCCc
Q 041428 275 FGW--EIPEHDFQTLCSMTDQKR 295 (322)
Q Consensus 275 ~~~--~L~~ee~~~l~~~~~~~~ 295 (322)
+++ +||+++++.|+++.++.+
T Consensus 303 ~~~~~~L~~e~~~~i~~~~~~~p 325 (327)
T 3eau_A 303 IQVLPKLSSSIVHEIDSILGNKP 325 (327)
T ss_dssp GGGGGGCCHHHHHHHHHHHCCCC
T ss_pred hccCCCCCHHHHHHHHHHhhccC
Confidence 998 999999999999987543
No 29
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=100.00 E-value=3e-60 Score=446.28 Aligned_cols=266 Identities=24% Similarity=0.384 Sum_probs=238.3
Q ss_pred CCcceEEc-CCCCccCcceeecc-----cCChhHHHHHHHHHHHcCCCeEecCCCcC---CHHHHHHHHHHHHhcCCCCC
Q 041428 11 HKAESFKL-LSGHTIPAVGLGTW-----KSGDEAFKSVFTAIVEGGYRHIDTAKQYG---VQENIGLALKEAMQTGIQRK 81 (322)
Q Consensus 11 ~~m~~~~l-~tg~~vs~lglG~~-----~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~e~~lG~~l~~~~~~~~~R~ 81 (322)
..| |++| +||++||+|||||| ..+.+++.++|++|+++|||+||||+.|| +|+.||++|+.. +++|+
T Consensus 36 ~~m-yr~lG~tg~~vs~iglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~~~R~ 111 (367)
T 3lut_A 36 LQF-YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKK---GWRRS 111 (367)
T ss_dssp CCS-EEESTTSSCEEESEEEECTTCCCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHH---TCCGG
T ss_pred hhc-eeecCCCCCcccceeECCccccCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHHhC---CCCCc
Confidence 469 9999 89999999999998 35778899999999999999999999998 499999999986 67899
Q ss_pred cEEEEecCCC-------CCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHH
Q 041428 82 DLFVTSKLWC-------ADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKL 154 (322)
Q Consensus 82 ~~~i~tK~~~-------~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l 154 (322)
++||+||++. .+.+++.+++++++||++||+||||+|++|||++. .+.+++|++|++|
T Consensus 112 ~v~I~TK~~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~---------------~~~~e~~~al~~l 176 (367)
T 3lut_A 112 SLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPN---------------TPMEETVRAMTHV 176 (367)
T ss_dssp GCEEEEEESBCCSSGGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTT---------------SCHHHHHHHHHHH
T ss_pred eEEEEeccccCCCCccCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCC---------------CCHHHHHHHHHHH
Confidence 9999999842 23578999999999999999999999999999764 5689999999999
Q ss_pred HHcCCccEEEecCCCHHHHHHHHhhcC----CCCceeceeeCCCCCcH---HHHHHHHHcCceEEEeccCCCCCCCCCCC
Q 041428 155 VKDGLVRDVGVCNFTLKKLNKLLNFAK----TKPSVCQMEMHPGWRND---KILEACKKNGIHVTAYSPLGSQGAGRDLI 227 (322)
Q Consensus 155 ~~~Gkir~iGvs~~~~~~l~~~~~~~~----~~~~~~q~~~~~~~~~~---~ll~~~~~~gi~via~~pl~~~G~l~~~~ 227 (322)
+++||||+||||||+++++++++..+. ++|+++|++||+++++. +++++|+++||++++|+||++ |+|...+
T Consensus 177 ~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~Ltgk~ 255 (367)
T 3lut_A 177 INQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLAC-GIVSGKY 255 (367)
T ss_dssp HHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCHHHHTHHHHHHHHHCCEEEEECTTGG-GGGGTTT
T ss_pred HHcCCeeEEEecCCCHHHHHHHHHHHHHcCCCCceeeeccccceecchhHhHHHHHHHHcCCeEEEeccccc-ccccCCc
Confidence 999999999999999999999887643 68899999999999974 899999999999999999998 8661110
Q ss_pred --------------------------------CCHHHHHHHHhcCCCHHHHHHHHhhhcC--CEEecCCCCHHHHHHhHh
Q 041428 228 --------------------------------HDPTVERIAKKLNKSPGQILLKWGIHRG--TSVIPKSTHPDRIKENIK 273 (322)
Q Consensus 228 --------------------------------~~~~l~~la~~~~~s~~qlal~~~l~~~--~~~i~g~~~~~~l~~nl~ 273 (322)
..+.+.++|+++|+|++|+||+|+++++ .+||||+++++|+++|++
T Consensus 256 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~ 335 (367)
T 3lut_A 256 DSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIG 335 (367)
T ss_dssp TTSCCTTSGGGSTTCHHHHHHHTSHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHTSTTEEEEEECCSSHHHHHHHHT
T ss_pred CCCCCCcccccccccccccccccchhhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCcEEecCCCCHHHHHHHHH
Confidence 0147889999999999999999999986 479999999999999999
Q ss_pred ccCC--CCCHHHHHHHHccccCCcc
Q 041428 274 AFGW--EIPEHDFQTLCSMTDQKRL 296 (322)
Q Consensus 274 a~~~--~L~~ee~~~l~~~~~~~~~ 296 (322)
++++ +|++++++.|+++.++.+.
T Consensus 336 a~~~~~~Ls~e~~~~i~~~~~~~~~ 360 (367)
T 3lut_A 336 AIQVLPKLSSSIVHEIDSILGNKPY 360 (367)
T ss_dssp HHHHGGGCCHHHHHHHHHHHCCCCC
T ss_pred hhcccCCCCHHHHHHHHHHHhcCCC
Confidence 9986 8999999999999987665
No 30
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=100.00 E-value=1.2e-59 Score=438.99 Aligned_cols=266 Identities=21% Similarity=0.358 Sum_probs=234.2
Q ss_pred CCCCcceEEc-CCCCccCcceeeccc-----CChhHHHHHHHHHHHcCCCeEecCCCcCC-----HHHHHHHHHHHHhcC
Q 041428 9 TNHKAESFKL-LSGHTIPAVGLGTWK-----SGDEAFKSVFTAIVEGGYRHIDTAKQYGV-----QENIGLALKEAMQTG 77 (322)
Q Consensus 9 ~~~~m~~~~l-~tg~~vs~lglG~~~-----~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~-----e~~lG~~l~~~~~~~ 77 (322)
....|+|++| +||.+||+||||||+ .+.+++.++|+.|++.|||+||||+.||+ |+.+|++|++. +
T Consensus 9 ~~~~M~~r~lg~tg~~vs~lglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~---~ 85 (346)
T 3n6q_A 9 RYGQMQYRYCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLRED---F 85 (346)
T ss_dssp TTSSCCEEECTTSSCEEESEEEECSSSCSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHH---C
T ss_pred cccCceeEecCCCCCeecCeeecCccccCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCCCcHHHHHHHHHHhh---c
Confidence 3446999999 899999999999986 35688999999999999999999999996 99999999975 3
Q ss_pred CC-CCcEEEEecCCC----C----CCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHH
Q 041428 78 IQ-RKDLFVTSKLWC----A----DLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVW 148 (322)
Q Consensus 78 ~~-R~~~~i~tK~~~----~----~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (322)
.+ |+++||+||++. . +.+++.+++++++||++||+||||+|+||||++. .+.+++|
T Consensus 86 ~~~R~~~~I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rL~~dyiDl~~lH~p~~~---------------~~~~e~~ 150 (346)
T 3n6q_A 86 AAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDEN---------------TPMEETA 150 (346)
T ss_dssp TTTGGGCEEEEEECSCCSSSTTSSSSCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTT---------------SCHHHHH
T ss_pred ccccccEEEEEEecccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEEeCCCCC---------------CCHHHHH
Confidence 34 999999999732 1 2278999999999999999999999999999864 5689999
Q ss_pred HHHHHHHHcCCccEEEecCCCHHHHHHHHhh---cCCCCceeceeeCCCCCc--H-HHHHHHHHcCceEEEeccCCCCCC
Q 041428 149 REMEKLVKDGLVRDVGVCNFTLKKLNKLLNF---AKTKPSVCQMEMHPGWRN--D-KILEACKKNGIHVTAYSPLGSQGA 222 (322)
Q Consensus 149 ~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~---~~~~~~~~q~~~~~~~~~--~-~ll~~~~~~gi~via~~pl~~~G~ 222 (322)
++|++|+++||||+||||||++++++++++. ...+++++|++||++++. . +++++|+++||++++|+||++ |+
T Consensus 151 ~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~ 229 (346)
T 3n6q_A 151 SALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQ-GL 229 (346)
T ss_dssp HHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHTTTCCCCEEECBCBTTBCHHHHTTHHHHHHHHTCEEEEBSTTGG-GG
T ss_pred HHHHHHHHcCCeeEEEeCCCCHHHHHHHHHHHHHcCCCeEEEeccCchhhcCcchhhHHHHHHHcCCeEEEeccccC-ee
Confidence 9999999999999999999999999887654 346789999999999987 3 799999999999999999998 86
Q ss_pred CCCC--------------------CCC-----------HHHHHHHHhcCCCHHHHHHHHhhhcC--CEEecCCCCHHHHH
Q 041428 223 GRDL--------------------IHD-----------PTVERIAKKLNKSPGQILLKWGIHRG--TSVIPKSTHPDRIK 269 (322)
Q Consensus 223 l~~~--------------------~~~-----------~~l~~la~~~~~s~~qlal~~~l~~~--~~~i~g~~~~~~l~ 269 (322)
|..- +.. +.+.++|+++|+|++|+||+|++++| ++||||+++++|++
T Consensus 230 L~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~~I~g~~~~~~l~ 309 (346)
T 3n6q_A 230 LTGKYLNGIPQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLE 309 (346)
T ss_dssp GGTSCC-----------------------CCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSSTTCSEEEECCSSHHHHH
T ss_pred cCCCccCCCCCccccccccccccccchhhhhHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHhCCCCcEEEcCCCCHHHHH
Confidence 5211 111 27899999999999999999999998 78999999999999
Q ss_pred HhHhcc-CCCCCHHHHHHHHccccC
Q 041428 270 ENIKAF-GWEIPEHDFQTLCSMTDQ 293 (322)
Q Consensus 270 ~nl~a~-~~~L~~ee~~~l~~~~~~ 293 (322)
+|++++ +++||+++++.|+++.++
T Consensus 310 en~~a~~~~~Ls~e~~~~i~~~~~~ 334 (346)
T 3n6q_A 310 ENVQALNNLTFSTKELAQIDQHIAD 334 (346)
T ss_dssp HHHGGGGCCCCCHHHHHHHHHHHHH
T ss_pred HHHhhccCCCCCHHHHHHHHHHHhc
Confidence 999998 689999999999999764
No 31
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=100.00 E-value=5.3e-60 Score=435.58 Aligned_cols=257 Identities=28% Similarity=0.391 Sum_probs=231.2
Q ss_pred cceEEc-CCCCccCcceeecccC---------ChhHHHHHHHHHHHcCCCeEecCCCcC---CHHHHHHHHHHHHhcCCC
Q 041428 13 AESFKL-LSGHTIPAVGLGTWKS---------GDEAFKSVFTAIVEGGYRHIDTAKQYG---VQENIGLALKEAMQTGIQ 79 (322)
Q Consensus 13 m~~~~l-~tg~~vs~lglG~~~~---------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~e~~lG~~l~~~~~~~~~ 79 (322)
|+|++| +||.+||+||||||++ +.+++.++|+.|+++|||+||||+.|| ||+.+|++|+.. +
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~-----~ 75 (312)
T 1pyf_A 1 MKKAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREF-----N 75 (312)
T ss_dssp -CCEECTTSCCEECSBCEECTTSSCTTTCSSCCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTS-----C
T ss_pred CCeeecCCCCCcccCEeEeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHhhhc-----C
Confidence 789999 8999999999999974 357889999999999999999999999 899999999852 6
Q ss_pred CCcEEEEecCC--C------CCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHH
Q 041428 80 RKDLFVTSKLW--C------ADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREM 151 (322)
Q Consensus 80 R~~~~i~tK~~--~------~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L 151 (322)
|+++||+||++ . .+.+++.+++++++||++||+||||+|++|||++. .+.+++|++|
T Consensus 76 R~~~~i~TK~g~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~---------------~~~~e~~~al 140 (312)
T 1pyf_A 76 REDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEH---------------TPKDEAVNAL 140 (312)
T ss_dssp GGGCEEEEEECEEEETTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSS---------------SCHHHHHHHH
T ss_pred CCeEEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCC---------------CCHHHHHHHH
Confidence 99999999963 2 46789999999999999999999999999999764 4578999999
Q ss_pred HHHHHcCCccEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCCcH--HHHHHHHHcCceEEEeccCCCCCCCCCCCC-
Q 041428 152 EKLVKDGLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWRND--KILEACKKNGIHVTAYSPLGSQGAGRDLIH- 228 (322)
Q Consensus 152 ~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~--~ll~~~~~~gi~via~~pl~~~G~l~~~~~- 228 (322)
++|+++||||+||||||++++++++++. .+|+++|++||+++++. +++++|+++||++++|+||++ |+|...+.
T Consensus 141 ~~l~~~Gkir~iGvSn~~~~~l~~~~~~--~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~L~~~~~~ 217 (312)
T 1pyf_A 141 NEMKKAGKIRSIGVSNFSLEQLKEANKD--GLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVS-GLLAGKYTE 217 (312)
T ss_dssp HHHHHTTSBSCEEEESCCHHHHHHHTTT--SCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTTT-TGGGTCCCT
T ss_pred HHHHHCCCcCEEEecCCCHHHHHHHHhh--CCceEEeccCCccccchHHHHHHHHHHcCCeEEEeccccc-ccccCCCCC
Confidence 9999999999999999999999999886 45799999999999984 599999999999999999998 76521110
Q ss_pred ---------------------------CHHHHHHHHhcCCCHHHHHHHHhhhcC--CEEecCCCCHHHHHHhHhccCCCC
Q 041428 229 ---------------------------DPTVERIAKKLNKSPGQILLKWGIHRG--TSVIPKSTHPDRIKENIKAFGWEI 279 (322)
Q Consensus 229 ---------------------------~~~l~~la~~~~~s~~qlal~~~l~~~--~~~i~g~~~~~~l~~nl~a~~~~L 279 (322)
.+.+.++|+++|+|++|+||+|++++| ++||||+++++|+++|+++++++|
T Consensus 218 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~~I~g~~~~~~l~en~~a~~~~L 297 (312)
T 1pyf_A 218 DTTFPEGDLRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIKTADVTL 297 (312)
T ss_dssp TCCCCTTCGGGGSGGGSHHHHHHHHHHHHTTHHHHHHTTSCHHHHHHHHHHHSTTCCCBCCCCSSHHHHHHHHGGGGCCC
T ss_pred CCCCCCcccccccccccchhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHhhccCCC
Confidence 146789999999999999999999998 789999999999999999999999
Q ss_pred CHHHHHHHHcccc
Q 041428 280 PEHDFQTLCSMTD 292 (322)
Q Consensus 280 ~~ee~~~l~~~~~ 292 (322)
|+++++.|+++..
T Consensus 298 ~~~~~~~l~~~~~ 310 (312)
T 1pyf_A 298 SQEDISFIDKLFA 310 (312)
T ss_dssp CHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhc
Confidence 9999999998864
No 32
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=100.00 E-value=1.6e-59 Score=439.03 Aligned_cols=268 Identities=22% Similarity=0.375 Sum_probs=235.9
Q ss_pred CCCCCCcceEEc-CCCCccCcceeeccc-----CChhHHHHHHHHHHHcCCCeEecCCCcCC-----HHHHHHHHHHHHh
Q 041428 7 EPTNHKAESFKL-LSGHTIPAVGLGTWK-----SGDEAFKSVFTAIVEGGYRHIDTAKQYGV-----QENIGLALKEAMQ 75 (322)
Q Consensus 7 ~~~~~~m~~~~l-~tg~~vs~lglG~~~-----~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~-----e~~lG~~l~~~~~ 75 (322)
+.....|+|++| +||++||+||||||+ .+.+++.++|+.|++.|||+||||+.||+ |+.+|++|++.+.
T Consensus 28 ~~~~~~M~~r~lg~tg~~vs~lglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~ 107 (353)
T 3erp_A 28 ENRYHTMEYRRCGRSGVKLPAISLGLWHNFGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFL 107 (353)
T ss_dssp TTTTTSCCEEECSSSSCEEESEEEECSSSCSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHTG
T ss_pred CCccccceeeecCCCCCccCCeeecChhhcCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhcc
Confidence 445557999999 899999999999994 36788999999999999999999999996 9999999986311
Q ss_pred cCCCCCcEEEEecCCCC--------CCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHH
Q 041428 76 TGIQRKDLFVTSKLWCA--------DLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGV 147 (322)
Q Consensus 76 ~~~~R~~~~i~tK~~~~--------~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~ 147 (322)
..|+++||+||++.. ..+++.+++++++||++||+||||+|+||||++. .+.+++
T Consensus 108 --~~R~~v~I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~---------------~~~~e~ 170 (353)
T 3erp_A 108 --PWRDELIISTKAGYTMWDGPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPE---------------TPLKET 170 (353)
T ss_dssp --GGGGGCEEEEEESSCCSSSTTSSTTCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTT---------------SCHHHH
T ss_pred --CCCCeEEEEeeeccCCCCCcccCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCC---------------CCHHHH
Confidence 139999999998421 2378999999999999999999999999999764 567899
Q ss_pred HHHHHHHHHcCCccEEEecCCCHHHHHHHHhhc---CCCCceeceeeCCCCCc--HHHHHHHHHcCceEEEeccCCCCCC
Q 041428 148 WREMEKLVKDGLVRDVGVCNFTLKKLNKLLNFA---KTKPSVCQMEMHPGWRN--DKILEACKKNGIHVTAYSPLGSQGA 222 (322)
Q Consensus 148 ~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~---~~~~~~~q~~~~~~~~~--~~ll~~~~~~gi~via~~pl~~~G~ 222 (322)
|++|++|+++||||+||||||++++++++++.+ +++|+++|++||++++. .+++++|+++||++++|+||++ |+
T Consensus 171 ~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~~~~~~~e~~ll~~~~~~gI~v~a~spL~~-G~ 249 (353)
T 3erp_A 171 MKALDHLVRHGKALYVGISNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAG-GQ 249 (353)
T ss_dssp HHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCEEEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBSTTGG-GT
T ss_pred HHHHHHHHHCCCccEEEecCCCHHHHHHHHHHHHHcCCCeEEeeccccccccchhhHHHHHHHHcCCeEEEeccccc-cc
Confidence 999999999999999999999999999888754 37889999999999985 5799999999999999999998 86
Q ss_pred CCC-----------------CCCC-----------HHHHHHHHhcCCCHHHHHHHHhhhcC--CEEecCCCCHHHHHHhH
Q 041428 223 GRD-----------------LIHD-----------PTVERIAKKLNKSPGQILLKWGIHRG--TSVIPKSTHPDRIKENI 272 (322)
Q Consensus 223 l~~-----------------~~~~-----------~~l~~la~~~~~s~~qlal~~~l~~~--~~~i~g~~~~~~l~~nl 272 (322)
|.. .+.. +.+.++|+++|+|++|+||+|++++| ++||||+++++|+++|+
T Consensus 250 Ltg~~~~~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~vI~G~~~~~~l~enl 329 (353)
T 3erp_A 250 LTDRYLNGIPEDSRAASGSRFLKPEQITADKLEKVRRLNELAARRGQKLSQMALAWVLRNDNVTSVLIGASKPSQIEDAV 329 (353)
T ss_dssp SSGGGTC-------------------CCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTSCCCEEEECCSSHHHHHHHH
T ss_pred cCCCccCCCCCcccccccccccccccccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCcEEEeCCCCHHHHHHHH
Confidence 621 0111 37899999999999999999999998 67999999999999999
Q ss_pred hcc-CCCCCHHHHHHHHcccc
Q 041428 273 KAF-GWEIPEHDFQTLCSMTD 292 (322)
Q Consensus 273 ~a~-~~~L~~ee~~~l~~~~~ 292 (322)
+++ +++||++|++.|+++.+
T Consensus 330 ~a~~~~~Ls~ee~~~i~~~~~ 350 (353)
T 3erp_A 330 GMLANRRFSAAECAEIDAILE 350 (353)
T ss_dssp HGGGGCCCCHHHHHHHHHHHH
T ss_pred HHhccCCCCHHHHHHHHHHHh
Confidence 999 78999999999999863
No 33
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=100.00 E-value=3.7e-60 Score=440.83 Aligned_cols=268 Identities=25% Similarity=0.396 Sum_probs=233.8
Q ss_pred cceEEc-CCCCccCcceeecccC--------ChhHHHHHHHHHHHcCCCeEecCCCcC----CHHHHHHHHHHHHhcCCC
Q 041428 13 AESFKL-LSGHTIPAVGLGTWKS--------GDEAFKSVFTAIVEGGYRHIDTAKQYG----VQENIGLALKEAMQTGIQ 79 (322)
Q Consensus 13 m~~~~l-~tg~~vs~lglG~~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg----~e~~lG~~l~~~~~~~~~ 79 (322)
|+|++| +||++||+||||||++ +.+++.++|++|+++|||+||||+.|| ||+.+|++|+.. +
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~G~sE~~lG~al~~~-----~ 75 (337)
T 3v0s_A 1 MPRVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQL-----P 75 (337)
T ss_dssp CCEEECSSSSCEEESSCEECGGGC-------CHHHHHHHHHHHHHTTCCEEECCTTSSSTTHHHHHHHHHHTTS-----C
T ss_pred CCeeecCCCCceecCeeecccccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCcHHHHHHHHHhhc-----C
Confidence 899999 8999999999999863 567889999999999999999999999 899999999852 7
Q ss_pred CCcEEEEecCCCC---------CCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHH
Q 041428 80 RKDLFVTSKLWCA---------DLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWRE 150 (322)
Q Consensus 80 R~~~~i~tK~~~~---------~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (322)
|+++||+||++.. +.+++.+++++++||++||+||||+|++|||++. .+.+++|++
T Consensus 76 R~~~~i~TK~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~---------------~~~~e~~~a 140 (337)
T 3v0s_A 76 REXIQVGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTT---------------VPIEITMGE 140 (337)
T ss_dssp GGGCEEEEEECEEEEETTEEEECCCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTT---------------SCHHHHHHH
T ss_pred CcceEEEeeeccccCCCCcccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCC---------------CCHHHHHHH
Confidence 9999999999753 5688999999999999999999999999999774 467899999
Q ss_pred HHHHHHcCCccEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCCc--HHHHHHHHHcCceEEEeccCCCCCCCC----
Q 041428 151 MEKLVKDGLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWRN--DKILEACKKNGIHVTAYSPLGSQGAGR---- 224 (322)
Q Consensus 151 L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~--~~ll~~~~~~gi~via~~pl~~~G~l~---- 224 (322)
|++|+++||||+||||||++++++++++.. +++++|++||++.+. .+++++|+++||++++|+||++ |+|.
T Consensus 141 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~--~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~L~g~~~ 217 (337)
T 3v0s_A 141 LXXLVEEGKIXYVGLSEASPDTIRRAHAVH--PVTALQIEYSLWTRDIEDEIVPLCRQLGIGIVPYSPIGR-GLFWGKAI 217 (337)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHS--CCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTHH-HHHHHHHH
T ss_pred HHHHHHCCCeeEEeccCCCHHHHHHHhccC--CceEEEeeccccccchhHHHHHHHHHcCceEEEeccccC-cccCCCCC
Confidence 999999999999999999999999998874 568999999999987 5799999999999999999987 7540
Q ss_pred --C---------------------CCCCHHHHHHHHhcCCCHHHHHHHHhhhcC--CEEecCCCCHHHHHHhHhccCCCC
Q 041428 225 --D---------------------LIHDPTVERIAKKLNKSPGQILLKWGIHRG--TSVIPKSTHPDRIKENIKAFGWEI 279 (322)
Q Consensus 225 --~---------------------~~~~~~l~~la~~~~~s~~qlal~~~l~~~--~~~i~g~~~~~~l~~nl~a~~~~L 279 (322)
. ....+.+.++|+++|+|++|+||+|++++| ++||||++|++|+++|+++++++|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~t~aqvaL~w~l~~~~v~~~I~g~~~~~~l~en~~a~~~~L 297 (337)
T 3v0s_A 218 KESLPENSVLTSHPRFVGENLEKNKQIYYRIEALSQKHGCTPVQLALAWVLHQGEDVVPIPGTTKIKNLHNNVGALKVXL 297 (337)
T ss_dssp HC-------------------------CHHHHHHHHHTTSCHHHHHHHHHHTTCTTBCCCCCCSCHHHHHHHHHGGGCCC
T ss_pred CCCCCCcchhhcccccchhhhhhHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCeEEEcCCCCHHHHHHHHHHhccCC
Confidence 0 011258999999999999999999999998 789999999999999999999999
Q ss_pred CHHHHHHHHccccCCccccccccccc
Q 041428 280 PEHDFQTLCSMTDQKRLLHGEILFVN 305 (322)
Q Consensus 280 ~~ee~~~l~~~~~~~~~~~g~~~~~~ 305 (322)
|+++++.|+++.+..+. .| .+|-.
T Consensus 298 ~~e~~~~l~~~~~~~~~-~g-~~~~~ 321 (337)
T 3v0s_A 298 TKEDLKEISDAVPLDEV-AG-ESIHE 321 (337)
T ss_dssp CHHHHHHHHHTCC-------------
T ss_pred CHHHHHHHHHhhcccCC-CC-CCchH
Confidence 99999999999887655 45 44443
No 34
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=100.00 E-value=4.7e-60 Score=439.46 Aligned_cols=260 Identities=24% Similarity=0.413 Sum_probs=237.1
Q ss_pred cceEEc-CCCCccCcceeecccC--------ChhHHHHHHHHHHHcCCCeEecCCCcC---CHHHHHHHHHHHHhcCCCC
Q 041428 13 AESFKL-LSGHTIPAVGLGTWKS--------GDEAFKSVFTAIVEGGYRHIDTAKQYG---VQENIGLALKEAMQTGIQR 80 (322)
Q Consensus 13 m~~~~l-~tg~~vs~lglG~~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~e~~lG~~l~~~~~~~~~R 80 (322)
|+|++| +||.+||+||||||++ +.+++.++|++|+++|||+||||+.|| ||+.+|++|+.. + +|
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~g~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~-~R 76 (333)
T 1pz1_A 1 MEYTSIADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEY---M-KR 76 (333)
T ss_dssp CCEEECTTSSCEEESEEEECTGGGCTTTTCCCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHH---T-CG
T ss_pred CCceecCCCCCcccCEeEechhhcCCcCCCCCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcC---C-Cc
Confidence 789999 8999999999999974 357899999999999999999999999 999999999975 5 79
Q ss_pred CcEEEEecCC---CC-----CCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHH
Q 041428 81 KDLFVTSKLW---CA-----DLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREME 152 (322)
Q Consensus 81 ~~~~i~tK~~---~~-----~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 152 (322)
+++||+||++ .. +.+++.+++++++||++||+||||+|++|||++. .+.+++|++|+
T Consensus 77 ~~~~i~TK~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~---------------~~~~e~~~al~ 141 (333)
T 1pz1_A 77 DQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPL---------------VPIEETAEVMK 141 (333)
T ss_dssp GGCEEEEEECEEESSSCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTT---------------SCHHHHHHHHH
T ss_pred CeEEEEEeeCccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCC---------------CCHHHHHHHHH
Confidence 9999999996 21 5689999999999999999999999999999764 45789999999
Q ss_pred HHHHcCCccEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCCc--HHHHHHHHHcCceEEEeccCCCCCCCCC-----
Q 041428 153 KLVKDGLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWRN--DKILEACKKNGIHVTAYSPLGSQGAGRD----- 225 (322)
Q Consensus 153 ~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~--~~ll~~~~~~gi~via~~pl~~~G~l~~----- 225 (322)
+|+++||||+||||||++++++++++. .+|+++|++||++++. .+++++|+++||++++|+||++ |+|..
T Consensus 142 ~l~~~Gkir~iGvSn~~~~~l~~~~~~--~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~Ltg~~~~~ 218 (333)
T 1pz1_A 142 ELYDAGKIRAIGVSNFSIEQMDTFRAV--APLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCR-GLLTGKMTEE 218 (333)
T ss_dssp HHHHTTSBSCEEECSCCHHHHHHHHTT--SCCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEEBCTTGG-GTTSSCCCTT
T ss_pred HHHHCCcCCEEEecCCCHHHHHHHHhc--CCcEEEeccccCccCchHHHHHHHHHHcCceEEEeecccC-CccCCCcccc
Confidence 999999999999999999999999987 5689999999999998 6899999999999999999998 86521
Q ss_pred -------------CCCC----------HHHHHHHHhcCC-CHHHHHHHHhhhcC--CEEecCCCCHHHHHHhHhccCCCC
Q 041428 226 -------------LIHD----------PTVERIAKKLNK-SPGQILLKWGIHRG--TSVIPKSTHPDRIKENIKAFGWEI 279 (322)
Q Consensus 226 -------------~~~~----------~~l~~la~~~~~-s~~qlal~~~l~~~--~~~i~g~~~~~~l~~nl~a~~~~L 279 (322)
.+.. +.+.++|+++|+ |++|+||+|++++| +++|||+++++|+++|+++++++|
T Consensus 219 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~~s~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~a~~~~L 298 (333)
T 1pz1_A 219 YTFEGDDLRNHDPKFQKPRFKEYLSAVNQLDKLAKTRYGKSVIHLAVRWILDQPGADIALWGARKPGQLEALSEITGWTL 298 (333)
T ss_dssp CCCCTTCGGGSCGGGSTTTHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHTSTTCCEEEEECCSGGGGTTCTTSSSCCC
T ss_pred ccCCCccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhcCCCC
Confidence 1222 688999999999 99999999999998 799999999999999999999999
Q ss_pred CHHHHHHHHccccCC
Q 041428 280 PEHDFQTLCSMTDQK 294 (322)
Q Consensus 280 ~~ee~~~l~~~~~~~ 294 (322)
|+++++.|+++....
T Consensus 299 ~~e~~~~l~~~~~~~ 313 (333)
T 1pz1_A 299 NSEDQKDINTILENT 313 (333)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhc
Confidence 999999999997744
No 35
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=100.00 E-value=1e-59 Score=439.59 Aligned_cols=277 Identities=25% Similarity=0.417 Sum_probs=239.4
Q ss_pred CCCCCCC--CcceEEc-CCCCccCcceeecccC--------ChhHHHHHHHHHHHcCCCeEecCCCcC---CHHHHHHHH
Q 041428 5 NIEPTNH--KAESFKL-LSGHTIPAVGLGTWKS--------GDEAFKSVFTAIVEGGYRHIDTAKQYG---VQENIGLAL 70 (322)
Q Consensus 5 ~~~~~~~--~m~~~~l-~tg~~vs~lglG~~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~e~~lG~~l 70 (322)
+.-|+.. .|+|++| +||++||+||||||++ +.+++.++|+.|+++|||+||||+.|| +|+.+|++|
T Consensus 9 ~~~~~~~~m~M~~~~lg~tg~~vs~lglGt~~~g~~~~g~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al 88 (348)
T 3n2t_A 9 GLVPRGSHMASDTIRIPGIDTPLSRVALGTWAIGGWMWGGPDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRAL 88 (348)
T ss_dssp --------CTTSEECCTTCSSCEESEEEECTTSSCSSSCSTTHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHH
T ss_pred CccCCCCCCCceeeecCCCCCccCCEeEeCccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhcCCChHHHHHHHHH
Confidence 3344443 4789999 8999999999999974 367899999999999999999999999 899999999
Q ss_pred HHHHhcCCCCCcEEEEecCCC-----C--------CCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCC
Q 041428 71 KEAMQTGIQRKDLFVTSKLWC-----A--------DLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDG 137 (322)
Q Consensus 71 ~~~~~~~~~R~~~~i~tK~~~-----~--------~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~ 137 (322)
+. +|+++||+||++. . +.+++.+++++++||++||+||||+|++|||++.
T Consensus 89 ~~------~R~~v~I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~----------- 151 (348)
T 3n2t_A 89 AE------KPNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDK----------- 151 (348)
T ss_dssp HH------SCCCCEEEEEECEEEESSSTTTCEEEECCCHHHHHHHHHHHHHHHTCSSEEEEEESSCCTT-----------
T ss_pred hh------CCCeEEEEEeecCCCcCCCcccccccCCCCHHHHHHHHHHHHHHhCCCcEEEEEecCCCCC-----------
Confidence 84 6999999999932 1 3689999999999999999999999999999874
Q ss_pred ccccccHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCCc--HHHHHHHHHcCceEEEec
Q 041428 138 EVLEFDMEGVWREMEKLVKDGLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWRN--DKILEACKKNGIHVTAYS 215 (322)
Q Consensus 138 ~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~--~~ll~~~~~~gi~via~~ 215 (322)
.+..++|++|++|+++||||+||||||++++++++++.+ +|+++|++||++++. .+++++|+++||++++|+
T Consensus 152 ----~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~--~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~s 225 (348)
T 3n2t_A 152 ----TPIDESARELQKLHQDGKIRALGVSNFSPEQMDIFREVA--PLATIQPPLNLFERTIEKDILPYAEKHNAVVLAYG 225 (348)
T ss_dssp ----SCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHS--CCCEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBC
T ss_pred ----CCHHHHHHHHHHHHHhCcceEEecCCCCHHHHHHHHHhC--CccEEEeeecCccCchHHHHHHHHHHcCCeEEEee
Confidence 568999999999999999999999999999999999986 579999999999987 689999999999999999
Q ss_pred cCCCCCCCCC-C-----------------CC----------CHHHHHHHHhcCCCHHHHHHHHhhhcC-CEEecCCCCHH
Q 041428 216 PLGSQGAGRD-L-----------------IH----------DPTVERIAKKLNKSPGQILLKWGIHRG-TSVIPKSTHPD 266 (322)
Q Consensus 216 pl~~~G~l~~-~-----------------~~----------~~~l~~la~~~~~s~~qlal~~~l~~~-~~~i~g~~~~~ 266 (322)
||++ |+|.. + +. .+.+.++|+++|+|++|+||+|+++++ +++|||+++++
T Consensus 226 pL~~-G~Ltg~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~v~~~I~g~~~~~ 304 (348)
T 3n2t_A 226 ALCR-GLLTGKMNRDTTFPKDDLRSNDPKFQKPNFEKYLAAMDEFEKLAEKRGKSVMAFAVRWVLDQGPVIALWGARKPG 304 (348)
T ss_dssp TTGG-GGGGTCCCTTCCCCTTSGGGGCGGGSTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTTTTEEEEEECSSGG
T ss_pred cccC-ccccCCccCCCCCCCcchhhcccccchhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHCCCcEEEeCCCCHH
Confidence 9998 86511 1 11 147899999999999999999999998 49999999999
Q ss_pred HHHHhHhccCCCCCHHHHHHHHccccCCc-ccccccccccC
Q 041428 267 RIKENIKAFGWEIPEHDFQTLCSMTDQKR-LLHGEILFVNS 306 (322)
Q Consensus 267 ~l~~nl~a~~~~L~~ee~~~l~~~~~~~~-~~~g~~~~~~~ 306 (322)
|+++|+++++++||+++++.|+++.+... ...| ..|..+
T Consensus 305 ~l~enl~a~~~~L~~e~~~~l~~~~~~~~~~~~g-~~~~~~ 344 (348)
T 3n2t_A 305 QVSGVKDVFGWSLTDEEKKAVDDILARHVPNPID-PTFMAP 344 (348)
T ss_dssp GGTTHHHHSSCCCCHHHHHHHHHHHHHHSCCCCC-SSCCC-
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHhccCCCC-ccccCC
Confidence 99999999999999999999999988642 2345 555544
No 36
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=100.00 E-value=3.3e-59 Score=430.75 Aligned_cols=267 Identities=19% Similarity=0.323 Sum_probs=229.7
Q ss_pred CCCCCCCCCcceEEc-CCCCccCcceeecccCC--hhHHHHHHHHHHHcCCCeEecCCCcC---CHHHHHHHHHHHHhcC
Q 041428 4 SNIEPTNHKAESFKL-LSGHTIPAVGLGTWKSG--DEAFKSVFTAIVEGGYRHIDTAKQYG---VQENIGLALKEAMQTG 77 (322)
Q Consensus 4 ~~~~~~~~~m~~~~l-~tg~~vs~lglG~~~~~--~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~e~~lG~~l~~~~~~~ 77 (322)
|+.+.....|+|++| +||.+||+||||||+++ .+++.++|+.|++.|||+||||+.|| +|+.+|++|+.
T Consensus 12 ~~~~~~~~~M~~r~lg~tg~~vs~lglGt~~~g~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~----- 86 (317)
T 1ynp_A 12 SGLVPRGSHMKKRQLGTSDLHVSELGFGCMSLGTDETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKG----- 86 (317)
T ss_dssp --------CCCEEECTTSSCEEESBCBCSCCCCSCHHHHHHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTT-----
T ss_pred cCCccccCCcceeecCCCCCcccCEeEcCcccCCCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhc-----
Confidence 344555568999999 89999999999999865 37889999999999999999999998 99999999974
Q ss_pred CCCCcEEEEecCCC----------CCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHH
Q 041428 78 IQRKDLFVTSKLWC----------ADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGV 147 (322)
Q Consensus 78 ~~R~~~~i~tK~~~----------~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~ 147 (322)
+|+++||+||++. .+.+++.+++++++||++||+||||+|+||||+.. .+..++
T Consensus 87 -~R~~v~I~TK~~~~~~~~~~~~~~~~~~~~v~~~~e~SL~rL~~dyiDl~llH~p~~~---------------~~~~e~ 150 (317)
T 1ynp_A 87 -RRQDIILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHGGTID---------------DPIDET 150 (317)
T ss_dssp -CGGGCEEEEEC---------------CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTT---------------SCHHHH
T ss_pred -CCCeEEEEeeeCCCcCCCCccccCCCCHHHHHHHHHHHHHHHCCCcEeEEEecCCCCC---------------CChHHH
Confidence 6999999999964 25688999999999999999999999999999763 457899
Q ss_pred HHHHHHHHHcCCccEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCCcH-HHHHHHHHcCceEEEeccCCCCCCCCCC
Q 041428 148 WREMEKLVKDGLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWRND-KILEACKKNGIHVTAYSPLGSQGAGRDL 226 (322)
Q Consensus 148 ~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~-~ll~~~~~~gi~via~~pl~~~G~l~~~ 226 (322)
|++|++|+++||||+||||||++++++++++... ++++|++||++.+.. .++++|+++||++++|+||++ |.|..-
T Consensus 151 ~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~--~~~~Q~~~nl~~~~~e~l~~~~~~~gI~v~a~spL~~-G~L~~~ 227 (317)
T 1ynp_A 151 IEAFEELKQEGVIRYYGISSIRPNVIKEYLKRSN--IVSIMMQYSILDRRPEEWFPLIQEHGVSVVVRGPVAR-GLLSRR 227 (317)
T ss_dssp HHHHHHHHHHTSEEEEEEECCCHHHHHHHHHHSC--CCEEEEECBTTBCGGGGGHHHHHHTTCEEEEECTTGG-GTTSSS
T ss_pred HHHHHHHHhCCceEEEEecCCCHHHHHHHHhcCC--CEEEeccCCchhCCHHHHHHHHHHcCCeEEEecCccC-cccCCC
Confidence 9999999999999999999999999999998854 699999999999874 499999999999999999998 765221
Q ss_pred --------CC------CHHHHHHHHhcCCCHHHHHHHHhhhcC--CEEecCCCCHHHHHHhHhccC-CCCCHHHHHHHHc
Q 041428 227 --------IH------DPTVERIAKKLNKSPGQILLKWGIHRG--TSVIPKSTHPDRIKENIKAFG-WEIPEHDFQTLCS 289 (322)
Q Consensus 227 --------~~------~~~l~~la~~~~~s~~qlal~~~l~~~--~~~i~g~~~~~~l~~nl~a~~-~~L~~ee~~~l~~ 289 (322)
+. .+.+.++|+ |+|++|+||+|++++| ++||||+++++|+++|+++++ ++||+++++.|++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~l~~ia~--g~s~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~a~~~~~Ls~ee~~~l~~ 305 (317)
T 1ynp_A 228 PLPEGEGYLNYRYDELKLLRESLPT--DRPLHELALQYCLAHDVVATVAAGASSIDQVKANVQAVEATPLTAEERQHIQK 305 (317)
T ss_dssp CCCTTCCBTTBCHHHHHHHHHHSCS--SSCHHHHHHHHHHTSTTEEEEECCCSSHHHHHHHHHHHTSCCCCHHHHHHHHH
T ss_pred CCccccccccccHHHHHHHHHHHHc--CCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhccCCCCCHHHHHHHHH
Confidence 00 156777777 9999999999999999 789999999999999999999 8999999999999
Q ss_pred cccCCcc
Q 041428 290 MTDQKRL 296 (322)
Q Consensus 290 ~~~~~~~ 296 (322)
+.+..+.
T Consensus 306 ~~~~~~~ 312 (317)
T 1ynp_A 306 LAKAAVY 312 (317)
T ss_dssp HSCCCCC
T ss_pred HHhhhcc
Confidence 9775443
No 37
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=1.5e-58 Score=431.83 Aligned_cols=275 Identities=25% Similarity=0.371 Sum_probs=233.6
Q ss_pred cceEEc-CCCCccCcceeecccC----ChhHHHHHHHHHHHcCCCeEecCCCc---------C-CHHHHHHHHHHHHhcC
Q 041428 13 AESFKL-LSGHTIPAVGLGTWKS----GDEAFKSVFTAIVEGGYRHIDTAKQY---------G-VQENIGLALKEAMQTG 77 (322)
Q Consensus 13 m~~~~l-~tg~~vs~lglG~~~~----~~~~~~~~l~~Al~~Gi~~~DTA~~Y---------g-~e~~lG~~l~~~~~~~ 77 (322)
|+|++| +||..||+||||||+. +.+++.++|+.|+++|||+||||+.| | +|+.||++|++. +
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~---~ 77 (346)
T 1lqa_A 1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKH---G 77 (346)
T ss_dssp CCEEECTTSSCEEESEEEECTTBTTTBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHH---C
T ss_pred CCeeecCCCCCeecCeeEEccccCCCCCHHHHHHHHHHHHHcCCCEEEChhhcCCCccCCCCCccHHHHHHHHhhc---C
Confidence 789999 6999999999999763 56789999999999999999999999 3 899999999975 5
Q ss_pred CCCCcEEEEecCCCC------------CCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCC--CCC-CCCCCCccccc
Q 041428 78 IQRKDLFVTSKLWCA------------DLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKE--GAS-RPPKDGEVLEF 142 (322)
Q Consensus 78 ~~R~~~~i~tK~~~~------------~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~--~~~-~~~~~~~~~~~ 142 (322)
+|+++||+||++.. +.+++.+++++++||++||+||||+|+||||..... +.. +...+.. ...
T Consensus 78 -~R~~~~i~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~d~~-~~~ 155 (346)
T 1lqa_A 78 -SREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSA-PAV 155 (346)
T ss_dssp -CGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSC-CSS
T ss_pred -CCceEEEEEeECCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCccccccccccccccccccc-cCC
Confidence 79999999999642 368899999999999999999999999999964211 000 0000000 024
Q ss_pred cHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHhhc---C-CCCceeceeeCCCCCc--HHHHHHHHHcCceEEEecc
Q 041428 143 DMEGVWREMEKLVKDGLVRDVGVCNFTLKKLNKLLNFA---K-TKPSVCQMEMHPGWRN--DKILEACKKNGIHVTAYSP 216 (322)
Q Consensus 143 ~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~---~-~~~~~~q~~~~~~~~~--~~ll~~~~~~gi~via~~p 216 (322)
+..++|++|++|+++||||+||||||+.++++++++.+ . .+|+++|++||++++. .+++++|+++||++++|+|
T Consensus 156 ~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~a~sp 235 (346)
T 1lqa_A 156 SLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSC 235 (346)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEEECT
T ss_pred CHHHHHHHHHHHHHcCCeEEEEecCCCHHHHHHHHHHHHHcCCCCceEEeccCChhhchhHHHHHHHHHHcCCeEEEecc
Confidence 67899999999999999999999999999888776653 2 5689999999999987 6899999999999999999
Q ss_pred CCCCCCCCC-C-------------------CCC-------HHHHHHHHhcCCCHHHHHHHHhhhcC--CEEecCCCCHHH
Q 041428 217 LGSQGAGRD-L-------------------IHD-------PTVERIAKKLNKSPGQILLKWGIHRG--TSVIPKSTHPDR 267 (322)
Q Consensus 217 l~~~G~l~~-~-------------------~~~-------~~l~~la~~~~~s~~qlal~~~l~~~--~~~i~g~~~~~~ 267 (322)
|++ |+|.. + ... +.+.++|+++|+|++|+||+|++++| ++||||+++++|
T Consensus 236 L~~-G~L~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~~I~g~~~~~~ 314 (346)
T 1lqa_A 236 LGF-GTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQ 314 (346)
T ss_dssp TGG-GGGGTTTGGGCCCTTCHHHHCTTCCTTCSHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTCTTEEEEEECCSSHHH
T ss_pred hhh-hhhcCccccccCCCcchhhcchhhcccccHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHhCCCCeEEEeCCCCHHH
Confidence 998 76521 0 011 26889999999999999999999999 579999999999
Q ss_pred HHHhHhccCCCCCHHHHHHHHccccC
Q 041428 268 IKENIKAFGWEIPEHDFQTLCSMTDQ 293 (322)
Q Consensus 268 l~~nl~a~~~~L~~ee~~~l~~~~~~ 293 (322)
+++|+++++++||+++++.|+++.++
T Consensus 315 l~enl~a~~~~L~~e~~~~l~~~~~~ 340 (346)
T 1lqa_A 315 LKTNIESLHLELSEDVLAEIEAVHQV 340 (346)
T ss_dssp HHHHHGGGGCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHhh
Confidence 99999999999999999999998763
No 38
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=100.00 E-value=7.5e-58 Score=416.81 Aligned_cols=242 Identities=20% Similarity=0.269 Sum_probs=212.1
Q ss_pred CCCCCCCCcceEEc-CCCCccCcceeecccCC---------------hhHHHHHHHHHHHcCCCeEecCCCcC-CHHHHH
Q 041428 5 NIEPTNHKAESFKL-LSGHTIPAVGLGTWKSG---------------DEAFKSVFTAIVEGGYRHIDTAKQYG-VQENIG 67 (322)
Q Consensus 5 ~~~~~~~~m~~~~l-~tg~~vs~lglG~~~~~---------------~~~~~~~l~~Al~~Gi~~~DTA~~Yg-~e~~lG 67 (322)
.|+++...|+|++| +||.+||+||||||+.+ .+++.++|+.|++.|||+||||+.|| +|+.+|
T Consensus 22 ~~~~~~~~m~~r~Lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~sE~~lG 101 (292)
T 4exb_A 22 SMIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFTIPDDREAADLLALARDLGINLIDTAPAYGRSEERLG 101 (292)
T ss_dssp CCCCSCSTTCCEECTTSSCEECSEEEECSTTTCC---------CCCCHHHHHHHHHHHHHTTCCEEECCTTSTTHHHHHH
T ss_pred cccCCCCCceeeecCCCCCccCCEeEcccccCCCcccccccccCCCCHHHHHHHHHHHHHcCCCEEEcCCccchHHHHHH
Confidence 46666678999999 89999999999999743 57899999999999999999999999 999999
Q ss_pred HHHHHHHhcCCCCCcEEEEecCCC--------CCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCcc
Q 041428 68 LALKEAMQTGIQRKDLFVTSKLWC--------ADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEV 139 (322)
Q Consensus 68 ~~l~~~~~~~~~R~~~~i~tK~~~--------~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~ 139 (322)
++|+. +|+++||+||++. .+.+++.+++++++||++||+||||+|++|||....
T Consensus 102 ~al~~------~R~~v~I~TK~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~d~------------ 163 (292)
T 4exb_A 102 PLLRG------QREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDL------------ 163 (292)
T ss_dssp HHHTT------TGGGCEEEEEESBC--CCSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEECCSCHH------------
T ss_pred HHhcc------CCCcEEEEEeeccccCCCCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEecCCCCc------------
Confidence 99984 6999999999973 256899999999999999999999999999993210
Q ss_pred ccccHH-HHHHHHHHHHHcCCccEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCCcH-HHHHHHHHcCceEEEeccC
Q 041428 140 LEFDME-GVWREMEKLVKDGLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWRND-KILEACKKNGIHVTAYSPL 217 (322)
Q Consensus 140 ~~~~~~-~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~-~ll~~~~~~gi~via~~pl 217 (322)
..+.. ++|++|++|+++||||+||||||++++++++++. |+++|++||+++++. +++++|+++||++++|+||
T Consensus 164 -~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~----~~~~Q~~~~~~~~~~~~l~~~~~~~gi~v~a~spL 238 (292)
T 4exb_A 164 -DILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALRE----GDCAMVTYNLNERAERPVIEYAAAHAKGILVKKAL 238 (292)
T ss_dssp -HHHHHSSHHHHHHHHHHTTSEEEEEEECSSHHHHHHHHHH----SSEEEEECSSSCCTTHHHHHHHHHTTCEEEEECCS
T ss_pred -cccchHHHHHHHHHHHHCCCceEEEeCCCCHHHHHHHHHh----hcEEeeccccccCCHHHHHHHHHHCCcEEEEeccc
Confidence 13344 8999999999999999999999999999999987 799999999999985 9999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHhcCCCHHHHHHHHhhhcC--CEEecCCCCHHHHHHhHhccCCCCCHH
Q 041428 218 GSQGAGRDLIHDPTVERIAKKLNKSPGQILLKWGIHRG--TSVIPKSTHPDRIKENIKAFGWEIPEH 282 (322)
Q Consensus 218 ~~~G~l~~~~~~~~l~~la~~~~~s~~qlal~~~l~~~--~~~i~g~~~~~~l~~nl~a~~~~L~~e 282 (322)
++ |+| +.++|+|++|+||+|++++| ++||||++|++|+++|++++++.||+|
T Consensus 239 ~~-G~L------------~~~~g~t~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~a~~~~Ls~~ 292 (292)
T 4exb_A 239 AS-GHA------------CLGAGQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAAQALKKA 292 (292)
T ss_dssp CC---------------------CCHHHHHHHHHHHSTTCCEEEECCCCHHHHHHHHHHHHHHHC--
T ss_pred cC-Ccc------------CCCCCCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHHhhccCCCC
Confidence 98 743 34589999999999999998 899999999999999999999998875
No 39
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=100.00 E-value=1e-56 Score=416.30 Aligned_cols=255 Identities=20% Similarity=0.257 Sum_probs=226.1
Q ss_pred ccCcceeecccC----ChhHHHHHHHHHHHcCCCeEecCCCcC---CHHHHHHHHHHHHhcCCCCCcEEEEecCCCC---
Q 041428 23 TIPAVGLGTWKS----GDEAFKSVFTAIVEGGYRHIDTAKQYG---VQENIGLALKEAMQTGIQRKDLFVTSKLWCA--- 92 (322)
Q Consensus 23 ~vs~lglG~~~~----~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~--- 92 (322)
.+|+||||||++ +.+++.++|+.|+++|||+||||+.|| ||+.+|++|+.. +..|+++||+||++..
T Consensus 4 ~~~~lglGt~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~~~r~~~~i~TK~~~~~~~ 80 (327)
T 1gve_A 4 ARPATVLGAMEMGRRMDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGL---GRSGCKVKIATKAAPMFGK 80 (327)
T ss_dssp CCCEEEEECTTBTTTBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHTTSCCCT---TSTTCCSEEEEEECSCTTC
T ss_pred CCCCeEEcccccCCCCCHHHHHHHHHHHHHcCCCEEEchhhcCCCchHHHHHHHHhhc---CCCCCeEEEEEEECCCCCC
Confidence 579999999985 678899999999999999999999994 899999999642 3347889999999765
Q ss_pred CCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCCHHH
Q 041428 93 DLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFTLKK 172 (322)
Q Consensus 93 ~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~ 172 (322)
+.+++.+++++++||++||+||||+|+||||+.. .+..++|++|++|+++||||+||||||+.++
T Consensus 81 ~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~---------------~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~ 145 (327)
T 1gve_A 81 TLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHG---------------TPIEETLQACHQLHQEGKFVELGLSNYVSWE 145 (327)
T ss_dssp CSSHHHHHHHHHHHHHHTTCSCEEEEEECSCCTT---------------SCHHHHHHHHHHHHHTTSEEEEEEESCCHHH
T ss_pred CCCHHHHHHHHHHHHHHHCCCeEeEEEecCCCCC---------------CCHHHHHHHHHHHHhCCceeEEEecCCCHHH
Confidence 6789999999999999999999999999999764 4578999999999999999999999999999
Q ss_pred HHHHHhhcC----CCCceeceeeCCCCCc--HHHHHHHHHcCceEEEeccCCCCCCCC-C-------------CCCC---
Q 041428 173 LNKLLNFAK----TKPSVCQMEMHPGWRN--DKILEACKKNGIHVTAYSPLGSQGAGR-D-------------LIHD--- 229 (322)
Q Consensus 173 l~~~~~~~~----~~~~~~q~~~~~~~~~--~~ll~~~~~~gi~via~~pl~~~G~l~-~-------------~~~~--- 229 (322)
++++++.+. ++|+++|++||++++. .+++++|+++||++++|+||++ |+|. + .+..
T Consensus 146 l~~~~~~~~~~g~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~Ltg~~~~~~~~~~~~~~~~~~~~~ 224 (327)
T 1gve_A 146 VAEICTLCKKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAG-GLLTGRYKYQDKDGKNPESRFFGNPF 224 (327)
T ss_dssp HHHHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGG-GGGGTCCCGGGGGSCCCSSSSSSCTT
T ss_pred HHHHHHHHHHcCCCCeEEEeccCcceecccHHHHHHHHHHcCCeEEEeccccc-ccccCcccCCCccccCCCcccccccc
Confidence 999887654 7789999999999987 6899999999999999999998 7651 1 1111
Q ss_pred -----------------HHHHHHHHh----cCCCHHHHHHHHhhhcC-------CEEecCCCCHHHHHHhHhccCC-CCC
Q 041428 230 -----------------PTVERIAKK----LNKSPGQILLKWGIHRG-------TSVIPKSTHPDRIKENIKAFGW-EIP 280 (322)
Q Consensus 230 -----------------~~l~~la~~----~~~s~~qlal~~~l~~~-------~~~i~g~~~~~~l~~nl~a~~~-~L~ 280 (322)
+.+.++|++ +|+|++|+||+|+++++ ++||||+++++|+++|++++++ +|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~l~~ia~~~~~~~g~s~aqvaL~w~l~~~~v~~~~g~~~I~g~~~~~~l~en~~a~~~~~L~ 304 (327)
T 1gve_A 225 SQLYMDRYWKEEHFNGIALVEKALKTTYGPTAPSMISAAVRWMYHHSQLKGTQGDAVILGMSSLEQLEQNLALVEEGPLE 304 (327)
T ss_dssp HHHHHHHHCSHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHTSSCCGGGTCEEEECCSSHHHHHHHHHHTTCCCCC
T ss_pred chhhhhcccChHHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHhCCCccccCCCeEEECCCCHHHHHHHHHhcCCCCCC
Confidence 578899999 99999999999999976 5799999999999999999987 899
Q ss_pred HHHHHHHHccccCCcc
Q 041428 281 EHDFQTLCSMTDQKRL 296 (322)
Q Consensus 281 ~ee~~~l~~~~~~~~~ 296 (322)
+++++.|+++.+..+.
T Consensus 305 ~e~~~~l~~~~~~~~~ 320 (327)
T 1gve_A 305 PAVVDAFDQAWNLVAH 320 (327)
T ss_dssp HHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHhccC
Confidence 9999999999775443
No 40
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=100.00 E-value=1.8e-56 Score=419.38 Aligned_cols=259 Identities=21% Similarity=0.253 Sum_probs=224.5
Q ss_pred CCCCccCcceeecccC----ChhHHHHHHHHHHHcCCCeEecCCCcC---CHHHHHHHHHHHHhcCCCCCcEEEEecCCC
Q 041428 19 LSGHTIPAVGLGTWKS----GDEAFKSVFTAIVEGGYRHIDTAKQYG---VQENIGLALKEAMQTGIQRKDLFVTSKLWC 91 (322)
Q Consensus 19 ~tg~~vs~lglG~~~~----~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~ 91 (322)
.++..+|+||||||++ +.+++.++|+.|+++|||+||||+.|| +|+.||++|++. .+ .|+++||+||++.
T Consensus 33 ~~~~~ip~lglGt~~~g~~~~~~~~~~~l~~Al~~Gin~~DTA~~Yg~G~sE~~lG~al~~~--~~-~r~~v~I~TK~~~ 109 (360)
T 2bp1_A 33 RPPPPRVASVLGTMEMGRRMDAPASAAAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGL--GG-GDCRVKIATKANP 109 (360)
T ss_dssp -----CCEEEEECTTBTTTBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHTSCCCT--TS-TTCCCEEEEEECC
T ss_pred CCCCCCCCEEECchhhCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHhhc--cC-CCCeEEEEeeecC
Confidence 4478899999999985 678899999999999999999999994 899999999631 02 3557999999976
Q ss_pred C---CCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCC
Q 041428 92 A---DLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNF 168 (322)
Q Consensus 92 ~---~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~ 168 (322)
. +.+++.+++++++||++||+||||+|+||||+.. .+.+++|++|++|+++||||+||||||
T Consensus 110 ~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~---------------~~~~e~~~aL~~l~~~Gkir~iGvSn~ 174 (360)
T 2bp1_A 110 WDGKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHG---------------TPVEETLHACQRLHQEGKFVELGLSNY 174 (360)
T ss_dssp CTTCCSSHHHHHHHHHHHHHHHTCSCEEEEEECSCCTT---------------SCHHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCC---------------CCHHHHHHHHHHHHHCCCccEEEEeCC
Confidence 5 6789999999999999999999999999999764 457899999999999999999999999
Q ss_pred CHHHHHHHHhhcC----CCCceeceeeCCCCCc--HHHHHHHHHcCceEEEeccCCCCCCCC-C-------------CCC
Q 041428 169 TLKKLNKLLNFAK----TKPSVCQMEMHPGWRN--DKILEACKKNGIHVTAYSPLGSQGAGR-D-------------LIH 228 (322)
Q Consensus 169 ~~~~l~~~~~~~~----~~~~~~q~~~~~~~~~--~~ll~~~~~~gi~via~~pl~~~G~l~-~-------------~~~ 228 (322)
+.++++++++.+. ++|+++|++||++++. .+++++|+++||++++|+||++ |+|. + .+.
T Consensus 175 ~~~~l~~~~~~~~~~g~~~~~~~Q~~yn~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~Ltg~~~~~~~~~~~~~~~~~ 253 (360)
T 2bp1_A 175 ASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNPLAG-GLLTGKYKYEDKDGKQPVGRFF 253 (360)
T ss_dssp CHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGG-GGGGTCCCGGGGTTTCCSBTTB
T ss_pred CHHHHHHHHHHHHHcCCCCceEEeeccchhhccchhhHHHHHHHcCCeEEEeccccc-CcccCCccCcCccccccccccc
Confidence 9999998887654 6789999999999987 6899999999999999999998 8652 1 111
Q ss_pred --------------------CHHHHHHHHh----cCCCHHHHHHHHhhhcC-------CEEecCCCCHHHHHHhHhccCC
Q 041428 229 --------------------DPTVERIAKK----LNKSPGQILLKWGIHRG-------TSVIPKSTHPDRIKENIKAFGW 277 (322)
Q Consensus 229 --------------------~~~l~~la~~----~~~s~~qlal~~~l~~~-------~~~i~g~~~~~~l~~nl~a~~~ 277 (322)
.+.+.++|++ +|+|++|+||+|+++++ +++|||+++++|+++|++++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~~~~~g~s~aqvaL~w~l~~~~v~~~~g~~vI~G~~~~~~l~enl~a~~~ 333 (360)
T 2bp1_A 254 GNSWAETYRNRFWKEHHFEAIALVEKALQAAYGASAPSVTSAALRWMYHHSQLQGAHGDAVILGMSSLEQLEQNLAATEE 333 (360)
T ss_dssp SSTTHHHHHHHHCCHHHHHHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHSSCCGGGTCEEEECCSSHHHHHHHHHHHTS
T ss_pred ccccchhhhhcccchhHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCcccccCCCeEEECCCCHHHHHHHHHhcCC
Confidence 1578889999 99999999999999875 5899999999999999999987
Q ss_pred -CCCHHHHHHHHccccCCcc
Q 041428 278 -EIPEHDFQTLCSMTDQKRL 296 (322)
Q Consensus 278 -~L~~ee~~~l~~~~~~~~~ 296 (322)
+|++++++.|+++.+..+.
T Consensus 334 ~~L~~e~~~~l~~~~~~~~~ 353 (360)
T 2bp1_A 334 GPLEPAVVDAFNQAWHLVAH 353 (360)
T ss_dssp CCCCHHHHHHHHHHHHHHGG
T ss_pred CCCCHHHHHHHHHHHHhccC
Confidence 8999999999999775443
No 41
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=98.18 E-value=2e-07 Score=94.61 Aligned_cols=131 Identities=14% Similarity=0.006 Sum_probs=94.2
Q ss_pred HHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEe--cCCCH---H------
Q 041428 103 LNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGV--CNFTL---K------ 171 (322)
Q Consensus 103 ~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGv--s~~~~---~------ 171 (322)
++.||++|++|++|++ +|..+. ....++++++++...+|+|+++|+ |++.. +
T Consensus 231 ~e~sL~~L~~d~vdI~-I~Ghn~----------------~~~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~~ 293 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFLC-VIGHNV----------------AGVTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRRP 293 (807)
T ss_dssp EEESGGGSCTTSCEEE-EESSCC----------------HHHHHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCCC
T ss_pred eeccccccCCCCceEE-EECCcC----------------ccHHHHHHHHHHCCCCCCCcEEeeccCCCchhhcccccccc
Confidence 4567888999999995 765333 224689999999999999999954 44433 1
Q ss_pred ----------HHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCCCCCCCHHHHHHHHhcCC
Q 041428 172 ----------KLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGRDLIHDPTVERIAKKLNK 241 (322)
Q Consensus 172 ----------~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~~~~~~~~l~~la~~~~~ 241 (322)
...+.++.+. ++++++.|+...+ ++++.|.+.|++|++++|..+.|.+ .. .+
T Consensus 294 ~~~pv~G~~~~~~~~i~tGa--~dv~vV~~n~i~~--~ll~~a~~~Gm~Vit~sp~~~~Grp---d~----------~d- 355 (807)
T 3cf4_A 294 PYAKVIGSMSKELKVIRSGM--PDVIVVDEQCVRG--DIVPEAQKLKIPVIASNPKIMYGLP---NR----------TD- 355 (807)
T ss_dssp CCSEEEESGGGHHHHHHHTC--CSEEEECSSSCCT--THHHHHHHTTCCEEECSTTCCTTCC---BC----------TT-
T ss_pred ccccccccHHHHHHHhhcCC--CeEEEEEecCCCh--HHHHHHHHCCCEEEEechhhhcCCC---cc----------cc-
Confidence 2344455433 5888888887763 7889999999999999999864532 11 01
Q ss_pred CHHHHHHHHhhhcC--CEEecCCCCHHHH
Q 041428 242 SPGQILLKWGIHRG--TSVIPKSTHPDRI 268 (322)
Q Consensus 242 s~~qlal~~~l~~~--~~~i~g~~~~~~l 268 (322)
.+.+.+++|+++++ .++++|+.+++++
T Consensus 356 ~~~~~~le~LLs~~~~~~l~~g~~~~~el 384 (807)
T 3cf4_A 356 ADVDETMEELKSGKIPGCVMLDYDKLGEL 384 (807)
T ss_dssp SCHHHHHHHHHTTSSSEEECCCHHHHHHH
T ss_pred chHHHHHHHHHhCCCCCceeeCCccHHHH
Confidence 23889999999987 4666777777765
No 42
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=82.04 E-value=29 Score=31.33 Aligned_cols=149 Identities=14% Similarity=0.080 Sum_probs=88.1
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCCCcCC---HHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHh
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAKQYGV---QENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQEL 110 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~---e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~L 110 (322)
.+.++..+....+.+.|++.|..=-..++ ...+=+++++.+ .+++-|..+.. ..++.+...+-++ .|+.+
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~-----G~d~~l~vDan-~~~~~~~a~~~~~-~l~~~ 217 (371)
T 2ovl_A 145 LPVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHL-----GDSFPLMVDAN-MKWTVDGAIRAAR-ALAPF 217 (371)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHH-----CTTSCEEEECT-TCSCHHHHHHHHH-HHGGG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHh-----CCCCeEEEECC-CCCCHHHHHHHHH-HHHhc
Confidence 35677777888889999999885322222 111224455442 23444555552 2445555444333 35655
Q ss_pred CCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEec-CCCHHHHHHHHhhcCCCCceece
Q 041428 111 QLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVC-NFTLKKLNKLLNFAKTKPSVCQM 189 (322)
Q Consensus 111 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs-~~~~~~l~~~~~~~~~~~~~~q~ 189 (322)
+++ ++..|-+. +-++.+.++++.-.|-=++-- -++.+.++++++.... +++|+
T Consensus 218 ~i~-----~iEqP~~~-------------------~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~--d~v~i 271 (371)
T 2ovl_A 218 DLH-----WIEEPTIP-------------------DDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSL--TLPEP 271 (371)
T ss_dssp CCS-----EEECCSCT-------------------TCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCC--SEECC
T ss_pred CCC-----EEECCCCc-------------------ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCC--CEEee
Confidence 544 34444321 225556666665455544443 3468899999887654 77888
Q ss_pred eeCCCCCc---HHHHHHHHHcCceEEEec
Q 041428 190 EMHPGWRN---DKILEACKKNGIHVTAYS 215 (322)
Q Consensus 190 ~~~~~~~~---~~ll~~~~~~gi~via~~ 215 (322)
..+..-.- ..+..+|+++|+.++.++
T Consensus 272 k~~~~GGi~~~~~i~~~A~~~gi~~~~h~ 300 (371)
T 2ovl_A 272 DVSNIGGYTTFRKVAALAEANNMLLTSHG 300 (371)
T ss_dssp CTTTTTSHHHHHHHHHHHHHTTCCEEECS
T ss_pred CccccCCHHHHHHHHHHHHHcCCeEcccc
Confidence 76554322 678999999999998853
No 43
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=80.55 E-value=20 Score=32.76 Aligned_cols=154 Identities=12% Similarity=0.017 Sum_probs=93.6
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCCCcCC--HHHHHHHHHHHHhcCCCCCcEEEE-ecCCCCCCChHHHHHHHHHHHHHh
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAKQYGV--QENIGLALKEAMQTGIQRKDLFVT-SKLWCADLSPDRVRSALNNTLQEL 110 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~--e~~lG~~l~~~~~~~~~R~~~~i~-tK~~~~~~~~~~i~~~~~~SL~~L 110 (322)
.+.++..+..+.+++.|++.|..=-.... +...=+++++.+ .+++-|. .... ..++.+... +.++.|
T Consensus 141 ~~~e~~~~~a~~~~~~G~~~~KiKvG~~~~~d~~~v~avR~a~-----g~~~~l~~vDan-~~~~~~~A~----~~~~~l 210 (391)
T 3gd6_A 141 EEVESNLDVVRQKLEQGFDVFRLYVGKNLDADEEFLSRVKEEF-----GSRVRIKSYDFS-HLLNWKDAH----RAIKRL 210 (391)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHH-----GGGCEEEEEECT-TCSCHHHHH----HHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeCCCHHHHHHHHHHHHHHc-----CCCCcEEEecCC-CCcCHHHHH----HHHHHH
Confidence 34566777778889999999875321121 112234555542 2345555 5542 234443322 233444
Q ss_pred CCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHhhcCCCCceecee
Q 041428 111 QLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQME 190 (322)
Q Consensus 111 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~ 190 (322)
.--.+++.++..|-+. +-++.+.++++.-.|.= |=+-++.+.+.++++.... +++|+.
T Consensus 211 ~~~~i~~~~iEqP~~~-------------------~d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~~~~--d~v~~k 268 (391)
T 3gd6_A 211 TKYDLGLEMIESPAPR-------------------NDFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKKDAI--DIFNIS 268 (391)
T ss_dssp TTCCSSCCEEECCSCT-------------------TCHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHHTCC--SEEEEC
T ss_pred HhcCCCcceecCCCCh-------------------hhHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHcCCC--CEEEEC
Confidence 3212333677766432 22566778887766655 8888999999999987654 777776
Q ss_pred eCCCC---CcHHHHHHHHHcCceEEEeccCCC
Q 041428 191 MHPGW---RNDKILEACKKNGIHVTAYSPLGS 219 (322)
Q Consensus 191 ~~~~~---~~~~ll~~~~~~gi~via~~pl~~ 219 (322)
.+..- ....+..+|+++|+.++..+.+.+
T Consensus 269 ~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 300 (391)
T 3gd6_A 269 PVFIGGLTSAKKAAYAAEVASKDVVLGTTQEL 300 (391)
T ss_dssp HHHHTSHHHHHHHHHHHHHTTCEEEECCCCCC
T ss_pred chhcCCHHHHHHHHHHHHHcCCEEEecCCCcc
Confidence 54432 226799999999999998766543
No 44
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=80.42 E-value=32 Score=30.81 Aligned_cols=147 Identities=12% Similarity=0.068 Sum_probs=90.1
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcCC---HHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYGV---QENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQ 111 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~---e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg 111 (322)
+.++..+....+.+.|++.|..=-..++ ...+=+++++.+ .+++-|..+.. ..++.+...+-++. |+.++
T Consensus 144 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~-----g~~~~l~vDan-~~~~~~~a~~~~~~-l~~~~ 216 (359)
T 1mdl_A 144 GVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQAV-----GDDFGIMVDYN-QSLDVPAAIKRSQA-LQQEG 216 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHH-----CSSSEEEEECT-TCSCHHHHHHHHHH-HHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHh-----CCCCEEEEECC-CCCCHHHHHHHHHH-HHHhC
Confidence 3455667778888999999985221122 111223444432 23555666653 34555555544443 77777
Q ss_pred CCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecC-CCHHHHHHHHhhcCCCCceecee
Q 041428 112 LDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCN-FTLKKLNKLLNFAKTKPSVCQME 190 (322)
Q Consensus 112 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~-~~~~~l~~~~~~~~~~~~~~q~~ 190 (322)
+++| ..|-+ .+-++.+.++++.-.|-=++--+ ++++.++++++.... +++|+.
T Consensus 217 i~~i-----E~P~~-------------------~~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~--d~v~ik 270 (359)
T 1mdl_A 217 VTWI-----EEPTL-------------------QHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGAC--RLAMPD 270 (359)
T ss_dssp CSCE-----ECCSC-------------------TTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCC--SEECCB
T ss_pred CCeE-----ECCCC-------------------hhhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCC--CEEeec
Confidence 6654 33322 13366778888876666555444 468888988887554 778877
Q ss_pred eCCCCC---cHHHHHHHHHcCceEEEe
Q 041428 191 MHPGWR---NDKILEACKKNGIHVTAY 214 (322)
Q Consensus 191 ~~~~~~---~~~ll~~~~~~gi~via~ 214 (322)
.+..-. ...+..+|+++|+.++.+
T Consensus 271 ~~~~GGi~~~~~i~~~A~~~g~~~~~~ 297 (359)
T 1mdl_A 271 AMKIGGVTGWIRASALAQQFGIPMSSH 297 (359)
T ss_dssp TTTTTHHHHHHHHHHHHHHTTCCBCCB
T ss_pred chhhCCHHHHHHHHHHHHHcCCeEeec
Confidence 655432 267899999999998776
No 45
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=76.36 E-value=45 Score=30.28 Aligned_cols=152 Identities=14% Similarity=0.032 Sum_probs=89.2
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhCCC
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQLD 113 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~d 113 (322)
.+.++..+....+.+.|++.|..=-..++-+..-+.++.. ++.+ .+++-|..... ..++.+...+-++. |+..|
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~av-R~a~-G~~~~l~vDan-~~~~~~~a~~~~~~-l~~~g-- 217 (389)
T 2oz8_A 144 LDDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELL-KTCV-PAGSKVMIDPN-EAWTSKEALTKLVA-IREAG-- 217 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHH-HTTS-CTTCEEEEECT-TCBCHHHHHHHHHH-HHHTT--
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHH-HHhh-CCCCeEEEECC-CCCCHHHHHHHHHH-HHhcC--
Confidence 3667777788888999999987422112211111223221 1112 23555555552 34455555444433 66622
Q ss_pred ccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcC-CccEEEecCCCHHHHHHHHhhcCCCCceeceeeC
Q 041428 114 YLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDG-LVRDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMH 192 (322)
Q Consensus 114 ~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~G-kir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~ 192 (322)
.++.++..|-+. +-++.+.++++.- .|-=.+--+.+.+.++++++.... +++|+. .
T Consensus 218 -~~i~~iEqP~~~-------------------~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~~~--d~v~ik-G 274 (389)
T 2oz8_A 218 -HDLLWVEDPILR-------------------HDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAHAA--DILNVH-G 274 (389)
T ss_dssp -CCCSEEESCBCT-------------------TCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTTCC--SEEEEC-S
T ss_pred -CCceEEeCCCCC-------------------cCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcCCC--CEEEEC-c
Confidence 234455555321 2356677787764 555444434478888888887554 778887 3
Q ss_pred CCCCcHHHHHHHHHcCceEEEe
Q 041428 193 PGWRNDKILEACKKNGIHVTAY 214 (322)
Q Consensus 193 ~~~~~~~ll~~~~~~gi~via~ 214 (322)
-+.....+..+|+++|+.++..
T Consensus 275 Git~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 275 QVTDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEC
T ss_pred CHHHHHHHHHHHHHcCCeEeec
Confidence 3333368999999999999988
No 46
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=75.85 E-value=47 Score=30.28 Aligned_cols=150 Identities=14% Similarity=0.038 Sum_probs=89.6
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCC----CcCC-----------HH------HHHHHHHHHHhcCCCCCcEEEEecCCCCC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAK----QYGV-----------QE------NIGLALKEAMQTGIQRKDLFVTSKLWCAD 93 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~----~Yg~-----------e~------~lG~~l~~~~~~~~~R~~~~i~tK~~~~~ 93 (322)
+.++..+...++.+.|++.|-.=. .+|. +. .+=+++++.+ .+++-|..... ..
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~-----G~d~~l~vDan-~~ 225 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAV-----GPDVDIIAEMH-AF 225 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHH-----CTTSEEEEECT-TC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhc-----CCCCEEEEECC-CC
Confidence 567777788888999999987532 1231 11 1122334331 23566666653 34
Q ss_pred CChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCC-CHHH
Q 041428 94 LSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNF-TLKK 172 (322)
Q Consensus 94 ~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~-~~~~ 172 (322)
++.+...+-++. |+.++++ ++..|-+. +-++.+.++++.-.|-=.+--+. +++.
T Consensus 226 ~~~~~a~~~~~~-l~~~~i~-----~iE~P~~~-------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~ 280 (407)
T 2o56_A 226 TDTTSAIQFGRM-IEELGIF-----YYEEPVMP-------------------LNPAQMKQVADKVNIPLAAGERIYWRWG 280 (407)
T ss_dssp SCHHHHHHHHHH-HGGGCCS-----CEECSSCS-------------------SSHHHHHHHHHHCCSCEEECTTCCHHHH
T ss_pred CCHHHHHHHHHH-HHhcCCC-----EEeCCCCh-------------------hhHHHHHHHHHhCCCCEEeCCCcCCHHH
Confidence 455555444443 6666554 34444321 23566777777656655554443 5788
Q ss_pred HHHHHhhcCCCCceeceeeCCCCC---cHHHHHHHHHcCceEEEeccC
Q 041428 173 LNKLLNFAKTKPSVCQMEMHPGWR---NDKILEACKKNGIHVTAYSPL 217 (322)
Q Consensus 173 l~~~~~~~~~~~~~~q~~~~~~~~---~~~ll~~~~~~gi~via~~pl 217 (322)
++++++.... +++|+..+..-. ...+..+|+++|+.++.++..
T Consensus 281 ~~~~i~~~~~--d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 326 (407)
T 2o56_A 281 YRPFLENGSL--SVIQPDICTCGGITEVKKICDMAHVYDKTVQIHVCG 326 (407)
T ss_dssp HHHHHHTTCC--SEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred HHHHHHcCCC--CEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 8888876544 777877654322 267999999999999887664
No 47
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=75.80 E-value=47 Score=30.26 Aligned_cols=148 Identities=14% Similarity=0.151 Sum_probs=88.7
Q ss_pred CChhHHHHHHHHHHHcCCCeEecC-CCcC-CH-HH---HHHHHHHHHhcCCCCCcEEEEecCCCCCC--ChHHHHHHHHH
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTA-KQYG-VQ-EN---IGLALKEAMQTGIQRKDLFVTSKLWCADL--SPDRVRSALNN 105 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA-~~Yg-~e-~~---lG~~l~~~~~~~~~R~~~~i~tK~~~~~~--~~~~i~~~~~~ 105 (322)
.+.++..+....+.+.|++.|..= ...| +- +. +=+++++.+ .+++-|..+.. ..+ +.+...+-++.
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~spvG~~~~~~~~e~v~avr~a~-----G~d~~l~vDan-~~~~~~~~~a~~~~~~ 217 (401)
T 2hzg_A 144 DTPQETLERARAARRDGFAAVKFGWGPIGRGTVAADADQIMAAREGL-----GPDGDLMVDVG-QIFGEDVEAAAARLPT 217 (401)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEESTTTTSSCHHHHHHHHHHHHHHH-----CSSSEEEEECT-TTTTTCHHHHHTTHHH
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEcCCCCCCCHHHHHHHHHHHHHHHh-----CCCCeEEEECC-CCCCCCHHHHHHHHHH
Confidence 356677777888899999998852 0023 21 22 222334331 23556666663 234 55554444433
Q ss_pred HHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHH-cCCccEEEecC-CCHHHHHHHHhhcCCC
Q 041428 106 TLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVK-DGLVRDVGVCN-FTLKKLNKLLNFAKTK 183 (322)
Q Consensus 106 SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~-~Gkir~iGvs~-~~~~~l~~~~~~~~~~ 183 (322)
|+.+++++ +..|-+ .+-++.+.++++ .-.|-=++--+ ++.+.++++++....
T Consensus 218 -l~~~~i~~-----iEqP~~-------------------~~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~- 271 (401)
T 2hzg_A 218 -LDAAGVLW-----LEEPFD-------------------AGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRI- 271 (401)
T ss_dssp -HHHTTCSE-----EECCSC-------------------TTCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCC-
T ss_pred -HHhcCCCE-----EECCCC-------------------ccCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCC-
Confidence 67666553 444432 123667778877 65555444433 468888988887554
Q ss_pred CceeceeeCCCC---CcHHHHHHHHHcCceEEEe
Q 041428 184 PSVCQMEMHPGW---RNDKILEACKKNGIHVTAY 214 (322)
Q Consensus 184 ~~~~q~~~~~~~---~~~~ll~~~~~~gi~via~ 214 (322)
+++|+..+..- ....+..+|+++|+.++.+
T Consensus 272 -d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 272 -GFIQIDCGRIGGLGPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp -SEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred -CEEEeCcchhCCHHHHHHHHHHHHHcCCEEecC
Confidence 77777654322 2267999999999999876
No 48
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=74.51 E-value=53 Score=30.15 Aligned_cols=147 Identities=13% Similarity=0.128 Sum_probs=89.8
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCCCcCC--------H------HHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHH
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAKQYGV--------Q------ENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRV 99 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~--------e------~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i 99 (322)
.+.++..+.++.+++.|++.|-. -|. . ...=+++|+. -.+++-|..... ..++.+..
T Consensus 124 ~~~e~~~~~a~~~~~~G~~~iKl---~G~~~~~~~~~~~~~~~d~e~v~avR~a-----vG~d~~L~vDaN-~~~~~~~A 194 (405)
T 3rr1_A 124 DRPADVIAGMKALQAGGFDHFKL---NGCEEMGIIDTSRAVDAAVARVAEIRSA-----FGNTVEFGLDFH-GRVSAPMA 194 (405)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEE---ESCCSSSCBCSHHHHHHHHHHHHHHHHT-----TGGGSEEEEECC-SCBCHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEE---ecCCcccccccchhHHHHHHHHHHHHHH-----hCCCceEEEECC-CCCCHHHH
Confidence 45677788888999999999987 221 1 1122344443 224555555542 23444433
Q ss_pred HHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEE-ecCCCHHHHHHHHh
Q 041428 100 RSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVG-VCNFTLKKLNKLLN 178 (322)
Q Consensus 100 ~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iG-vs~~~~~~l~~~~~ 178 (322)
.+ +-+.|+.+++ .++..|-+. +-++.+.++++.-.|--.+ =+-++...+.++++
T Consensus 195 ~~-~~~~L~~~~i-----~~iEeP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~ 249 (405)
T 3rr1_A 195 KV-LIKELEPYRP-----LFIEEPVLA-------------------EQAETYARLAAHTHLPIAAGERMFSRFDFKRVLE 249 (405)
T ss_dssp HH-HHHHHGGGCC-----SCEECSSCC-------------------SSTHHHHHHHTTCSSCEEECTTCCSHHHHHHHHH
T ss_pred HH-HHHHHHhcCC-----CEEECCCCc-------------------ccHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHH
Confidence 32 2334555554 445555432 1245677888776665443 35567889999988
Q ss_pred hcCCCCceeceeeCCCCC---cHHHHHHHHHcCceEEEecc
Q 041428 179 FAKTKPSVCQMEMHPGWR---NDKILEACKKNGIHVTAYSP 216 (322)
Q Consensus 179 ~~~~~~~~~q~~~~~~~~---~~~ll~~~~~~gi~via~~p 216 (322)
.... +++|+...-.-. ...+..+|+++|+.++.++.
T Consensus 250 ~~a~--d~v~~d~~~~GGitea~kia~lA~~~gi~v~~h~~ 288 (405)
T 3rr1_A 250 AGGV--SILQPDLSHAGGITECVKIAAMAEAYDVALAPHCP 288 (405)
T ss_dssp HCCC--SEECCBTTTTTHHHHHHHHHHHHHTTTCEECCBCC
T ss_pred HhCC--CeEEEChhhcCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence 7654 788887655422 26799999999999988754
No 49
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=74.31 E-value=34 Score=31.17 Aligned_cols=147 Identities=8% Similarity=-0.042 Sum_probs=87.7
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcCC----HHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHh
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYGV----QENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQEL 110 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~----e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~L 110 (322)
+.++..+....+.+.|++.|..=-..++ .+.+ +++++.+ .+++-|..... ..++.+...+-++. |+.+
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v-~avR~av-----g~d~~l~vDan-~~~~~~~a~~~~~~-l~~~ 233 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQPDGALDIARV-TAVRKHL-----GDAVPLMVDAN-QQWDRPTAQRMCRI-FEPF 233 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHH-HHHHHHH-----CTTSCEEEECT-TCCCHHHHHHHHHH-HGGG
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHH-HHHHHHc-----CCCCEEEEECC-CCCCHHHHHHHHHH-HHhh
Confidence 6677778888899999998875211122 2222 4555542 23344444542 34566555544433 6666
Q ss_pred CCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEec-CCCHHHHHHHHhhcCCCCceece
Q 041428 111 QLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVC-NFTLKKLNKLLNFAKTKPSVCQM 189 (322)
Q Consensus 111 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs-~~~~~~l~~~~~~~~~~~~~~q~ 189 (322)
++++| ..|-+. +-++.+.++++.-.|-=++-- -++++.++++++.... +++|+
T Consensus 234 ~i~~i-----E~P~~~-------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~v~i 287 (393)
T 2og9_A 234 NLVWI-----EEPLDA-------------------YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAA--DYLMP 287 (393)
T ss_dssp CCSCE-----ECCSCT-------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC--SEECC
T ss_pred CCCEE-----ECCCCc-------------------ccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCC--CEEee
Confidence 65543 344221 235667777776556544443 3478889999887554 67777
Q ss_pred eeCCC---CCcHHHHHHHHHcCceEEEec
Q 041428 190 EMHPG---WRNDKILEACKKNGIHVTAYS 215 (322)
Q Consensus 190 ~~~~~---~~~~~ll~~~~~~gi~via~~ 215 (322)
..+-. .....+..+|+++|+.++.++
T Consensus 288 k~~~~GGit~~~~i~~~A~~~gi~~~~h~ 316 (393)
T 2og9_A 288 DAPRVGGITPFLKIASLAEHAGLMLAPHF 316 (393)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCEECCCS
T ss_pred CccccCCHHHHHHHHHHHHHcCCEEeccC
Confidence 65432 222679999999999988543
No 50
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=74.01 E-value=53 Score=29.98 Aligned_cols=150 Identities=16% Similarity=0.148 Sum_probs=88.9
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCC------C-----------cC-C--H---H---HHHHHHHHHHhcCCCCCcEEEEec
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAK------Q-----------YG-V--Q---E---NIGLALKEAMQTGIQRKDLFVTSK 88 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~------~-----------Yg-~--e---~---~lG~~l~~~~~~~~~R~~~~i~tK 88 (322)
+.++..+...++.+.|++.|..=. . || + + + .+=+++++.+ .+++-|...
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~-----G~d~~l~vD 224 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAM-----GDDADIIVE 224 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHH-----CSSSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhc-----CCCCEEEEE
Confidence 567777888888999999987432 2 22 1 1 1 1122333321 235556656
Q ss_pred CCCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecC-
Q 041428 89 LWCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCN- 167 (322)
Q Consensus 89 ~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~- 167 (322)
.. ..++.+...+-++. |+.+ ++.++..|-+. +-++.+.++++.-.|-=++--+
T Consensus 225 an-~~~~~~~ai~~~~~-l~~~-----~i~~iE~P~~~-------------------~~~~~~~~l~~~~~iPIa~dE~~ 278 (410)
T 2gl5_A 225 IH-SLLGTNSAIQFAKA-IEKY-----RIFLYEEPIHP-------------------LNSDNMQKVSRSTTIPIATGERS 278 (410)
T ss_dssp CT-TCSCHHHHHHHHHH-HGGG-----CEEEEECSSCS-------------------SCHHHHHHHHHHCSSCEEECTTC
T ss_pred CC-CCCCHHHHHHHHHH-HHhc-----CCCeEECCCCh-------------------hhHHHHHHHHhhCCCCEEecCCc
Confidence 53 24455444433322 4444 45566665331 2256677777765665554433
Q ss_pred CCHHHHHHHHhhcCCCCceeceeeCCCCC---cHHHHHHHHHcCceEEEeccC
Q 041428 168 FTLKKLNKLLNFAKTKPSVCQMEMHPGWR---NDKILEACKKNGIHVTAYSPL 217 (322)
Q Consensus 168 ~~~~~l~~~~~~~~~~~~~~q~~~~~~~~---~~~ll~~~~~~gi~via~~pl 217 (322)
++++.++++++.... +++|+..+..-. ...+..+|+++|+.++.++..
T Consensus 279 ~~~~~~~~~i~~~~~--d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 329 (410)
T 2gl5_A 279 YTRWGYRELLEKQSI--AVAQPDLCLCGGITEGKKICDYANIYDTTVQVHVCG 329 (410)
T ss_dssp CTTHHHHHHHHTTCC--SEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred CCHHHHHHHHHcCCC--CEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 467888888876544 777876654322 267999999999999887653
No 51
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=73.82 E-value=42 Score=30.74 Aligned_cols=150 Identities=11% Similarity=0.072 Sum_probs=88.0
Q ss_pred ChhHHHHHHHHHHHcCCCeEec--CCCcCC-----------HH------HHHHHHHHHHhcCCCCCcEEEEecCCCCCCC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDT--AKQYGV-----------QE------NIGLALKEAMQTGIQRKDLFVTSKLWCADLS 95 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DT--A~~Yg~-----------e~------~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~ 95 (322)
+.++..+...++.+.|++.|-. +..||. +. .+=+++++.+ .+++-|..... ..++
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~-----G~d~~l~vDan-~~~~ 222 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREAV-----GPEVEVAIDMH-GRFD 222 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHH-----CSSSEEEEECT-TCCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHhc-----CCCCEEEEECC-CCCC
Confidence 4566667778888999998764 222332 01 1123344431 23555666653 3445
Q ss_pred hHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEec-CCCHHHHH
Q 041428 96 PDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVC-NFTLKKLN 174 (322)
Q Consensus 96 ~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs-~~~~~~l~ 174 (322)
.+...+-++ .|+.++++ ++..|-+. +-++.+.++++.-.|-=.+-- -++.+.++
T Consensus 223 ~~~a~~~~~-~l~~~~i~-----~iEeP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~ 277 (410)
T 2qq6_A 223 IPSSIRFAR-AMEPFGLL-----WLEEPTPP-------------------ENLDALAEVRRSTSTPICAGENVYTRFDFR 277 (410)
T ss_dssp HHHHHHHHH-HHGGGCCS-----EEECCSCT-------------------TCHHHHHHHHTTCSSCEEECTTCCSHHHHH
T ss_pred HHHHHHHHH-HHhhcCCC-----eEECCCCh-------------------hhHHHHHHHHhhCCCCEEeCCCcCCHHHHH
Confidence 555444333 35555543 45555321 236667777776666544443 34688899
Q ss_pred HHHhhcCCCCceeceeeCCC---CCcHHHHHHHHHcCceEEEeccC
Q 041428 175 KLLNFAKTKPSVCQMEMHPG---WRNDKILEACKKNGIHVTAYSPL 217 (322)
Q Consensus 175 ~~~~~~~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~via~~pl 217 (322)
++++.... +++|+..+-. .....+..+|+++|+.++.++..
T Consensus 278 ~~i~~~~~--d~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~~~ 321 (410)
T 2qq6_A 278 ELFAKRAV--DYVMPDVAKCGGLAEAKRIANLAELDYIPFAPHNVS 321 (410)
T ss_dssp HHHHTTCC--SEECCBHHHHTHHHHHHHHHHHHHTTTCCBCCBCCS
T ss_pred HHHHcCCC--CEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 99876544 6777765432 12267889999999998887664
No 52
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=73.47 E-value=19 Score=29.48 Aligned_cols=67 Identities=6% Similarity=0.042 Sum_probs=47.3
Q ss_pred ccHHHHHHHHHHHHHc-CCccEEEecCCC--HHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEE
Q 041428 142 FDMEGVWREMEKLVKD-GLVRDVGVCNFT--LKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTA 213 (322)
Q Consensus 142 ~~~~~~~~~L~~l~~~-Gkir~iGvs~~~--~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via 213 (322)
...-+++++|.++++. +||..+|..|.. ...+..++. . .+.+..|+-...-...+..+++.|+.++.
T Consensus 78 ~s~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~---~--~i~~~~~~~~~e~~~~i~~l~~~G~~vvV 147 (196)
T 2q5c_A 78 VTRFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLG---V--KIKEFLFSSEDEITTLISKVKTENIKIVV 147 (196)
T ss_dssp CCHHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHT---C--EEEEEEECSGGGHHHHHHHHHHTTCCEEE
T ss_pred CCHhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhC---C--ceEEEEeCCHHHHHHHHHHHHHCCCeEEE
Confidence 4467999999999986 457777777664 344555543 3 56666664444447899999999999976
No 53
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=73.33 E-value=54 Score=29.73 Aligned_cols=152 Identities=14% Similarity=0.081 Sum_probs=91.4
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCc-CCH-HHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhCC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQY-GVQ-ENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQL 112 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Y-g~e-~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~ 112 (322)
+.++..+....+.+.|++.|..=-.- ..+ ..+=+++++.+ .+++-|..+.. ..++.+...+-++ .|+.+++
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v~avr~a~-----g~d~~l~vDan-~~~~~~~a~~~~~-~l~~~~i 236 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPVADDGPAAEIANLRQVL-----GPQAKIAADMH-WNQTPERALELIA-EMQPFDP 236 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHHHHHHHHH-----CTTSEEEEECC-SCSCHHHHHHHHH-HHGGGCC
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCCChHHHHHHHHHHHHh-----CCCCEEEEECC-CCCCHHHHHHHHH-HHhhcCC
Confidence 56777778888899999998741110 011 12223445432 23555666653 3455555544443 3666665
Q ss_pred CccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecC-CCHHHHHHHHhhcCCCCceeceee
Q 041428 113 DYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCN-FTLKKLNKLLNFAKTKPSVCQMEM 191 (322)
Q Consensus 113 d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~-~~~~~l~~~~~~~~~~~~~~q~~~ 191 (322)
++| ..|-+ .+-++.+.++++.-.|-=++--+ ++++.++++++.... +++|+..
T Consensus 237 ~~i-----EqP~~-------------------~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~--d~v~ik~ 290 (388)
T 2nql_A 237 WFA-----EAPVW-------------------TEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRI--AIVQPEM 290 (388)
T ss_dssp SCE-----ECCSC-------------------TTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCC--SEECCCH
T ss_pred CEE-----ECCCC-------------------hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCC--CEEEecC
Confidence 543 33322 13366778888776666555444 368889988876554 7777765
Q ss_pred CC--CCCcHHHHHHHHHcCceEEEeccCCC
Q 041428 192 HP--GWRNDKILEACKKNGIHVTAYSPLGS 219 (322)
Q Consensus 192 ~~--~~~~~~ll~~~~~~gi~via~~pl~~ 219 (322)
+. +.....+..+|+++|+.++.++.+.+
T Consensus 291 ~~GGit~~~~i~~~A~~~g~~~~~h~~~es 320 (388)
T 2nql_A 291 GHKGITNFIRIGALAAEHGIDVIPHATVGA 320 (388)
T ss_dssp HHHCHHHHHHHHHHHHHHTCEECCCCCSSC
T ss_pred CCCCHHHHHHHHHHHHHcCCeEEeecCCCc
Confidence 44 11126788999999999988765533
No 54
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=73.29 E-value=44 Score=30.03 Aligned_cols=151 Identities=12% Similarity=0.118 Sum_probs=86.3
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcCCH--HHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHH-HHHHHHHHHhC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYGVQ--ENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVR-SALNNTLQELQ 111 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e--~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~-~~~~~SL~~Lg 111 (322)
+.++..+....+.+.|++.|..=-....+ ..+=+++++.+ .+++-|..+.. ..++.+... +-++ .|+.++
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a~-----g~~~~l~vDan-~~~~~~~a~~~~~~-~l~~~~ 213 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGTNVKEDVKRIEAVRERV-----GNDIAIRVDVN-QGWKNSANTLTALR-SLGHLN 213 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHHHH-----CTTSEEEEECT-TTTBSHHHHHHHHH-TSTTSC
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCCCHHHHHHHHHHHHHHh-----CCCCeEEEECC-CCCCHHHHHHHHHH-HHHhCC
Confidence 45666777788889999999852111111 11223444432 23455555552 233444333 2222 233333
Q ss_pred CCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEec-CCCHHHHHHHHhhcCCCCceecee
Q 041428 112 LDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVC-NFTLKKLNKLLNFAKTKPSVCQME 190 (322)
Q Consensus 112 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs-~~~~~~l~~~~~~~~~~~~~~q~~ 190 (322)
+.++..|-+ .+-++.+.++++.-.|-=.+-- -++++.+.++++.... +++|+.
T Consensus 214 -----i~~iEqP~~-------------------~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~--d~v~ik 267 (369)
T 2p8b_A 214 -----IDWIEQPVI-------------------ADDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAA--DKVNIK 267 (369)
T ss_dssp -----CSCEECCBC-------------------TTCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCC--SEEEEC
T ss_pred -----CcEEECCCC-------------------cccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCC--CEEEee
Confidence 334555432 1236667788877666544433 3578889998887554 677776
Q ss_pred eCCCC---CcHHHHHHHHHcCceEEEeccCC
Q 041428 191 MHPGW---RNDKILEACKKNGIHVTAYSPLG 218 (322)
Q Consensus 191 ~~~~~---~~~~ll~~~~~~gi~via~~pl~ 218 (322)
.+..- ....+..+|+++|+.++..+.+.
T Consensus 268 ~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 298 (369)
T 2p8b_A 268 LMKCGGIYPAVKLAHQAEMAGIECQVGSMVE 298 (369)
T ss_dssp HHHHTSHHHHHHHHHHHHHTTCEEEECCSSC
T ss_pred cchhCCHHHHHHHHHHHHHcCCcEEecCCCc
Confidence 54322 22678999999999998877553
No 55
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=72.45 E-value=56 Score=29.54 Aligned_cols=150 Identities=12% Similarity=0.010 Sum_probs=89.1
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcC-CHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhCCC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYG-VQENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQLD 113 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg-~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~d 113 (322)
+.++..+....+.+.|++.|.. ..| .-+..-+.++.. ++.+. ++-|..+.. ..++.+...+- -+.|+.++++
T Consensus 147 ~~e~~~~~a~~~~~~Gf~~iKi--k~g~~~~~~~e~v~av-r~a~g--d~~l~vD~n-~~~~~~~a~~~-~~~l~~~~i~ 219 (384)
T 2pgw_A 147 TAEELARDAAVGHAQGERVFYL--KVGRGEKLDLEITAAV-RGEIG--DARLRLDAN-EGWSVHDAINM-CRKLEKYDIE 219 (384)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEE--ECCSCHHHHHHHHHHH-HTTST--TCEEEEECT-TCCCHHHHHHH-HHHHGGGCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--CcCCCHHHHHHHHHHH-HHHcC--CcEEEEecC-CCCCHHHHHHH-HHHHHhcCCC
Confidence 4566677778888999999985 223 222222223221 11223 555555652 34455554433 3356666655
Q ss_pred ccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecC-CCHHHHHHHHhhcCCCCceeceeeC
Q 041428 114 YLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCN-FTLKKLNKLLNFAKTKPSVCQMEMH 192 (322)
Q Consensus 114 ~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~-~~~~~l~~~~~~~~~~~~~~q~~~~ 192 (322)
+ +..|-+ .+-|+.+.++++.-.|-=++--+ ++++.++++++.... +++|+..+
T Consensus 220 ~-----iEqP~~-------------------~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~--d~v~ik~~ 273 (384)
T 2pgw_A 220 F-----IEQPTV-------------------SWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAA--DMICIGPR 273 (384)
T ss_dssp E-----EECCSC-------------------TTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCC--SEEEECHH
T ss_pred E-----EeCCCC-------------------hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCC--CEEEEcch
Confidence 3 444432 12356677777765665555444 468899999887554 77777654
Q ss_pred CCC---CcHHHHHHHHHcCceEEEeccC
Q 041428 193 PGW---RNDKILEACKKNGIHVTAYSPL 217 (322)
Q Consensus 193 ~~~---~~~~ll~~~~~~gi~via~~pl 217 (322)
..- ....+..+|+++|+.++..+.+
T Consensus 274 ~~GGit~~~~i~~~A~~~g~~~~~~~~~ 301 (384)
T 2pgw_A 274 EIGGIQPMMKAAAVAEAAGLKICIHSSF 301 (384)
T ss_dssp HHTSHHHHHHHHHHHHHTTCCEEECCCS
T ss_pred hhCCHHHHHHHHHHHHHCCCeEeeccCc
Confidence 332 2267999999999999988644
No 56
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=72.32 E-value=59 Score=29.74 Aligned_cols=149 Identities=10% Similarity=0.075 Sum_probs=89.4
Q ss_pred hhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhCCCcc
Q 041428 36 DEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQLDYL 115 (322)
Q Consensus 36 ~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~d~i 115 (322)
.++..+..+.+++.|++.|..=-.-+.+...=+++++.+ .+++-|..... ..++.+. . .+-+.|+.++++
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv~~~~d~~~v~avR~a~-----G~~~~L~vDaN-~~w~~~~-~-~~~~~l~~~~i~-- 233 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKIKPGWDVEPLQETRRAV-----GDHFPLWTDAN-SSFELDQ-W-ETFKAMDAAKCL-- 233 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEECBTTBSHHHHHHHHHHH-----CTTSCEEEECT-TCCCGGG-H-HHHHHHGGGCCS--
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCcchHHHHHHHHHHhc-----CCCCEEEEeCC-CCCCHHH-H-HHHHHHHhcCCC--
Confidence 677778888889999998864221122222334566552 12333444442 3445555 3 333556666544
Q ss_pred ceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHhhcCCCCceeceeeCCC
Q 041428 116 DLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVR-DVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPG 194 (322)
Q Consensus 116 Dl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~ 194 (322)
++..|-+. +-++.+.+|++.-.|- ..|=+-++...+.++++.... +++|+.....
T Consensus 234 ---~iEqP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~--d~v~~k~~~~ 289 (400)
T 3mwc_A 234 ---FHEQPLHY-------------------EALLDLKELGERIETPICLDESLISSRVAEFVAKLGIS--NIWNIKIQRV 289 (400)
T ss_dssp ---CEESCSCT-------------------TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCC--SEEEECHHHH
T ss_pred ---EEeCCCCh-------------------hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCC--CEEEEcchhh
Confidence 34454321 2356677777765554 334456678889999877554 7777765433
Q ss_pred ---CCcHHHHHHHHHcCceEEEeccCC
Q 041428 195 ---WRNDKILEACKKNGIHVTAYSPLG 218 (322)
Q Consensus 195 ---~~~~~ll~~~~~~gi~via~~pl~ 218 (322)
.....+..+|+++|+.++..+.+.
T Consensus 290 GGit~~~~ia~~A~~~gi~~~~~~~~e 316 (400)
T 3mwc_A 290 GGLLEAIKIYKIATDNGIKLWGGTMPE 316 (400)
T ss_dssp TSHHHHHHHHHHHHHTTCEEEECCSCC
T ss_pred CCHHHHHHHHHHHHHcCCEEEecCCCC
Confidence 222679999999999998876554
No 57
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=71.27 E-value=60 Score=29.44 Aligned_cols=150 Identities=11% Similarity=0.049 Sum_probs=89.6
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCCCcCC-HH--HHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHh
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAKQYGV-QE--NIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQEL 110 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~-e~--~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~L 110 (322)
.+.++..+...++.+.|++.|..=-...+ +. .+=+++++.+ .+++-|..+.. ..++.+...+-++. |+.+
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~-----G~d~~l~vDan-~~~~~~~a~~~~~~-l~~~ 220 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREIV-----GDELPLMLDLA-VPEDLDQTKSFLKE-VSSF 220 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHHH-----CSSSCEEEECC-CCSCHHHHHHHHHH-HGGG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHHh-----CCCCEEEEEcC-CCCCHHHHHHHHHH-HHhc
Confidence 45677777888889999999875221211 11 1223444432 23455555653 24455554444333 6666
Q ss_pred CCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecC-CCHHHHHHHHhhcCCCCceece
Q 041428 111 QLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCN-FTLKKLNKLLNFAKTKPSVCQM 189 (322)
Q Consensus 111 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~-~~~~~l~~~~~~~~~~~~~~q~ 189 (322)
+++ ++..|-+. +-++.+.++++.-.|-=++--+ ++++.++++++.... +++|+
T Consensus 221 ~i~-----~iEqP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~v~i 274 (391)
T 2qgy_A 221 NPY-----WIEEPVDG-------------------ENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAA--DIFNP 274 (391)
T ss_dssp CCS-----EEECSSCT-------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC--SEECC
T ss_pred CCC-----eEeCCCCh-------------------hhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCC--CEEEE
Confidence 654 34444221 2366677777765665454433 468889998877554 77887
Q ss_pred eeCCCCCc---HHHHHHHHHcCceEEEecc
Q 041428 190 EMHPGWRN---DKILEACKKNGIHVTAYSP 216 (322)
Q Consensus 190 ~~~~~~~~---~~ll~~~~~~gi~via~~p 216 (322)
..+..-.- ..+..+|+++|+.++..+.
T Consensus 275 k~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 275 DISGMGGLIDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp BTTTSSCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred CcchhCCHHHHHHHHHHHHHCCCEEeccCC
Confidence 66543322 6799999999999988765
No 58
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=70.97 E-value=47 Score=30.28 Aligned_cols=146 Identities=11% Similarity=0.011 Sum_probs=86.8
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcCC----HHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHh
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYGV----QENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQEL 110 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~----e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~L 110 (322)
+.++..+....+.+.|++.|..--.-++ .+.+ +++++.+ .+++-|..... ..++.+...+-++. |+.+
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v-~avR~av-----G~d~~l~vDan-~~~~~~~ai~~~~~-l~~~ 246 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQPNCAEDIRRL-TAVREAL-----GDEFPLMVDAN-QQWDRETAIRMGRK-MEQF 246 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHH-HHHHHHH-----CSSSCEEEECT-TCSCHHHHHHHHHH-HGGG
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCCCCHHHHHHHH-HHHHHHc-----CCCCeEEEECC-CCCCHHHHHHHHHH-HHHc
Confidence 6677777888889999998875211112 2222 4555542 23444444542 34455555444443 6666
Q ss_pred CCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEec-CCCHHHHHHHHhhcCCCCceece
Q 041428 111 QLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVC-NFTLKKLNKLLNFAKTKPSVCQM 189 (322)
Q Consensus 111 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs-~~~~~~l~~~~~~~~~~~~~~q~ 189 (322)
++++ +..|-+. +-++.+.++++.-.|-=.+-- -++++.++++++.... +++|+
T Consensus 247 ~i~~-----iEqP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~v~i 300 (398)
T 2pp0_A 247 NLIW-----IEEPLDA-------------------YDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNAS--DFVQP 300 (398)
T ss_dssp TCSC-----EECCSCT-------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC--SEECC
T ss_pred CCce-----eeCCCCh-------------------hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCC--CEEEe
Confidence 6543 4444321 235667777776556544433 3468889998877554 67777
Q ss_pred eeCCC---CCcHHHHHHHHHcCceEEEe
Q 041428 190 EMHPG---WRNDKILEACKKNGIHVTAY 214 (322)
Q Consensus 190 ~~~~~---~~~~~ll~~~~~~gi~via~ 214 (322)
..+-. .....+..+|+++|+.++.+
T Consensus 301 k~~~~GGite~~~i~~~A~~~gi~~~~h 328 (398)
T 2pp0_A 301 DAPRVGGISPFLKIMDLAAKHGRKLAPH 328 (398)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCEECCC
T ss_pred CccccCCHHHHHHHHHHHHHcCCeEeec
Confidence 65432 22267999999999998854
No 59
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=70.78 E-value=60 Score=29.25 Aligned_cols=150 Identities=9% Similarity=0.030 Sum_probs=89.2
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhCCCc
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQLDY 114 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~d~ 114 (322)
+.++..+...++.+.|++.|..=-.. +-+..-+.++.. ++.+ .+++-|..+.. ..++.+...+ -++.|. .
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~av-r~a~-g~d~~l~vDan-~~~~~~~a~~----~~~~l~--~ 214 (379)
T 2rdx_A 145 SEAETRAELARHRAAGYRQFQIKVGA-DWQSDIDRIRAC-LPLL-EPGEKAMADAN-QGWRVDNAIR----LARATR--D 214 (379)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHH-GGGS-CTTCEEEEECT-TCSCHHHHHH----HHHHTT--T
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccC-CHHHHHHHHHHH-HHhc-CCCCEEEEECC-CCCCHHHHHH----HHHHHH--h
Confidence 45667777888899999998852111 222222233322 1111 23566666663 2344443332 334443 2
Q ss_pred cceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecC-CCHHHHHHHHhhcCCCCceeceeeCC
Q 041428 115 LDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCN-FTLKKLNKLLNFAKTKPSVCQMEMHP 193 (322)
Q Consensus 115 iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~-~~~~~l~~~~~~~~~~~~~~q~~~~~ 193 (322)
.++ ++..| .+ -++.+.++++.-.|-=++--+ ++++.++++++.... +++|+..+.
T Consensus 215 ~~i-~iE~P------------------~~---~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~--d~v~ik~~~ 270 (379)
T 2rdx_A 215 LDY-ILEQP------------------CR---SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGA--EICCLKISN 270 (379)
T ss_dssp SCC-EEECC------------------SS---SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCC--SEEEEETTT
T ss_pred CCe-EEeCC------------------cC---CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCC--CEEEEeccc
Confidence 344 45433 22 467788888776665555443 468889999887654 788887665
Q ss_pred CCCc---HHHHHHHHHcCceEEEeccCC
Q 041428 194 GWRN---DKILEACKKNGIHVTAYSPLG 218 (322)
Q Consensus 194 ~~~~---~~ll~~~~~~gi~via~~pl~ 218 (322)
.-.- ..+..+|+++|+.++..+.+.
T Consensus 271 ~GGit~~~~i~~~A~~~g~~~~~~~~~e 298 (379)
T 2rdx_A 271 LGGLSKARRTRDFLIDNRMPVVAEDSWG 298 (379)
T ss_dssp TTSHHHHHHHHHHHHHTTCCEEEECSBC
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEeeccC
Confidence 4332 678999999999999986553
No 60
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=69.64 E-value=66 Score=29.24 Aligned_cols=150 Identities=13% Similarity=0.028 Sum_probs=89.0
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCC----CcCC-----------HHH------HHHHHHHHHhcCCCCCcEEEEecCCCCC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAK----QYGV-----------QEN------IGLALKEAMQTGIQRKDLFVTSKLWCAD 93 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~----~Yg~-----------e~~------lG~~l~~~~~~~~~R~~~~i~tK~~~~~ 93 (322)
+.++..+...++.+.|++.|..=. .+|. +.. +=+++++.+ .+++-|..... ..
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~av-----G~d~~l~vDan-~~ 219 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAV-----GPDVDIIVENH-GH 219 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHH-----CTTSEEEEECT-TC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHh-----CCCCeEEEECC-CC
Confidence 567777788888999999987532 1231 111 122334331 23566666653 34
Q ss_pred CChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCC-CHHH
Q 041428 94 LSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNF-TLKK 172 (322)
Q Consensus 94 ~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~-~~~~ 172 (322)
++.+...+-++. |+.+ ++.++..|-+. +-++.+.++++.-.|-=.+--++ +++.
T Consensus 220 ~~~~~ai~~~~~-l~~~-----~i~~iE~P~~~-------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~ 274 (403)
T 2ox4_A 220 TDLVSAIQFAKA-IEEF-----NIFFYEEINTP-------------------LNPRLLKEAKKKIDIPLASGERIYSRWG 274 (403)
T ss_dssp SCHHHHHHHHHH-HGGG-----CEEEEECCSCT-------------------TSTHHHHHHHHTCCSCEEECTTCCHHHH
T ss_pred CCHHHHHHHHHH-HHhh-----CCCEEeCCCCh-------------------hhHHHHHHHHHhCCCCEEecCCcCCHHH
Confidence 455544433332 4444 45556655331 23566777787766665554444 5788
Q ss_pred HHHHHhhcCCCCceeceeeCCC---CCcHHHHHHHHHcCceEEEeccC
Q 041428 173 LNKLLNFAKTKPSVCQMEMHPG---WRNDKILEACKKNGIHVTAYSPL 217 (322)
Q Consensus 173 l~~~~~~~~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~via~~pl 217 (322)
++++++.... +++|+..+.. .....+..+|+++|+.++.++..
T Consensus 275 ~~~~i~~~~~--d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 320 (403)
T 2ox4_A 275 FLPFLEDRSI--DVIQPDLGTCGGFTEFKKIADMAHIFEVTVQAHVAG 320 (403)
T ss_dssp HHHHHHTTCC--SEECCCHHHHTHHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred HHHHHHcCCC--CEEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 8888876544 6777765432 12267999999999999887664
No 61
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=67.00 E-value=75 Score=28.85 Aligned_cols=150 Identities=14% Similarity=0.147 Sum_probs=89.2
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcCC----HHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHh
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYGV----QENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQEL 110 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~----e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~L 110 (322)
+.++..+....+.+.|++.|..--. ++ .+.+ +++++.+ .+++-|..... ..++.+...+-+ +.|+.+
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~vKik~g-~~~~~~~e~v-~avR~a~-----g~d~~l~vDan-~~~~~~~a~~~~-~~l~~~ 215 (397)
T 2qde_A 145 EPEAVAEEALAVLREGFHFVKLKAG-GPLKADIAMV-AEVRRAV-----GDDVDLFIDIN-GAWTYDQALTTI-RALEKY 215 (397)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECC-SCHHHHHHHH-HHHHHHH-----CTTSCEEEECT-TCCCHHHHHHHH-HHHGGG
T ss_pred CHHHHHHHHHHHHHhhhhheeeccc-CCHHHHHHHH-HHHHHhh-----CCCCEEEEECC-CCCCHHHHHHHH-HHHHhC
Confidence 4566677778888999998874211 12 2222 4555542 23444444542 344555544433 346666
Q ss_pred CCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEec-CCCHHHHHHHHhhcCCCCceece
Q 041428 111 QLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVC-NFTLKKLNKLLNFAKTKPSVCQM 189 (322)
Q Consensus 111 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs-~~~~~~l~~~~~~~~~~~~~~q~ 189 (322)
++++ +..|-+. +-++.+.++++.-.|--.+-- -++.+.++++++.... +++|+
T Consensus 216 ~i~~-----iEqP~~~-------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~v~i 269 (397)
T 2qde_A 216 NLSK-----IEQPLPA-------------------WDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAA--DGLMI 269 (397)
T ss_dssp CCSC-----EECCSCT-------------------TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCC--SEEEE
T ss_pred CCCE-----EECCCCh-------------------hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCC--CEEEE
Confidence 5543 4444321 236667777776655544433 3468889998887554 77777
Q ss_pred eeCCC---CCcHHHHHHHHHcCceEEEeccCCC
Q 041428 190 EMHPG---WRNDKILEACKKNGIHVTAYSPLGS 219 (322)
Q Consensus 190 ~~~~~---~~~~~ll~~~~~~gi~via~~pl~~ 219 (322)
..+.. .....+..+|+++|+.++..+-+.+
T Consensus 270 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 302 (397)
T 2qde_A 270 KTQKAGGLLKAQRWLTLARLANLPVICGCMVGS 302 (397)
T ss_dssp CHHHHTSHHHHHHHHHHHHHHTCCEEECCCSCC
T ss_pred eccccCCHHHHHHHHHHHHHcCCeEEEecCccc
Confidence 65432 2226799999999999999865543
No 62
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=66.29 E-value=73 Score=28.51 Aligned_cols=152 Identities=10% Similarity=0.019 Sum_probs=91.3
Q ss_pred ChhHHHHHHHHHHH-cCCCeEecCCCcCC---HHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHh
Q 041428 35 GDEAFKSVFTAIVE-GGYRHIDTAKQYGV---QENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQEL 110 (322)
Q Consensus 35 ~~~~~~~~l~~Al~-~Gi~~~DTA~~Yg~---e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~L 110 (322)
+.++..+....+++ .|++.|..--.-++ ...+=+++++.+ .+++-|..+.. ..++.+...+-+ +.|+.+
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~-----g~~~~l~vDan-~~~~~~~a~~~~-~~l~~~ 214 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAV-----GDRASVRVDVN-QGWDEQTASIWI-PRLEEA 214 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH-----GGGCEEEEECT-TCCCHHHHHHHH-HHHHHH
T ss_pred CHHHHHHHHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhc-----CCCCEEEEECC-CCCCHHHHHHHH-HHHHhc
Confidence 45666677788888 99999885322222 112233455432 23455666653 345555554433 357777
Q ss_pred CCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEe-cCCCHHHHHHHHhhcCCCCceece
Q 041428 111 QLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGV-CNFTLKKLNKLLNFAKTKPSVCQM 189 (322)
Q Consensus 111 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~~~q~ 189 (322)
++++ +..|-+. +-++.+.++++.-.|-=.+- +-++.+.+.++++.... +++|+
T Consensus 215 ~i~~-----iEqP~~~-------------------~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~--d~v~i 268 (370)
T 1nu5_A 215 GVEL-----VEQPVPR-------------------ANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAV--DAFSL 268 (370)
T ss_dssp TCCE-----EECCSCT-------------------TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCC--SEEEE
T ss_pred Ccce-----EeCCCCc-------------------ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCC--CEEEE
Confidence 7553 4444321 23566777777655543333 34578889998887554 77777
Q ss_pred eeCCCC---CcHHHHHHHHHcCceEEEeccCCC
Q 041428 190 EMHPGW---RNDKILEACKKNGIHVTAYSPLGS 219 (322)
Q Consensus 190 ~~~~~~---~~~~ll~~~~~~gi~via~~pl~~ 219 (322)
..+..- ....+..+|+++|+.++..+.+.+
T Consensus 269 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 301 (370)
T 1nu5_A 269 KLCNMGGIANTLKVAAVAEAAGISSYGGTMLDS 301 (370)
T ss_dssp CHHHHTSHHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred chhhcCCHHHHHHHHHHHHHcCCcEEecCCcch
Confidence 654322 226799999999999998876543
No 63
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=65.11 E-value=78 Score=28.41 Aligned_cols=147 Identities=17% Similarity=0.135 Sum_probs=85.1
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcC-CHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhCCC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYG-VQENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQLD 113 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg-~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~d 113 (322)
+.++..+...++++.|++.|..=-.-. ..+.+ +++++. + +++-|..... ..++.+. .+- -+.|+.++
T Consensus 148 ~~~~~~~~a~~~~~~G~~~iKik~~~~~d~~~v-~avr~a----~--~~~~l~vDan-~~~~~~~-~~~-~~~l~~~~-- 215 (375)
T 1r0m_A 148 DEQATVDLVRRHVEQGYRRIKLKIKPGWDVQPV-RATREA----F--PDIRLTVDAN-SAYTLAD-AGR-LRQLDEYD-- 215 (375)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEECBTTBSHHHH-HHHHHH----C--TTSCEEEECT-TCCCGGG-HHH-HHTTGGGC--
T ss_pred CHHHHHHHHHHHHHhcccEEEEecChHHHHHHH-HHHHHH----c--CCCeEEEeCC-CCCCHHH-HHH-HHHHHhCC--
Confidence 556666777888899999876421101 22333 556654 2 3444454442 3445555 332 22355554
Q ss_pred ccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEE-ecCCCHHHHHHHHhhcCCCCceeceeeC
Q 041428 114 YLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVG-VCNFTLKKLNKLLNFAKTKPSVCQMEMH 192 (322)
Q Consensus 114 ~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iG-vs~~~~~~l~~~~~~~~~~~~~~q~~~~ 192 (322)
+.++..|-+. +-++.+.+++++-.|--.+ =+-++.+.+.++++.... +++|+..+
T Consensus 216 ---i~~iEqP~~~-------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~--d~v~ik~~ 271 (375)
T 1r0m_A 216 ---LTYIEQPLAW-------------------DDLVDHAELARRIRTPLCLDESVASASDARKALALGAG--GVINLKVA 271 (375)
T ss_dssp ---CSCEECCSCT-------------------TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSC--SEEEECTT
T ss_pred ---CcEEECCCCc-------------------ccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCC--CEEEECcc
Confidence 4445555321 2244566666654443333 334578899999887554 77888665
Q ss_pred CCCC---cHHHHHHHHHcCceEEEeccC
Q 041428 193 PGWR---NDKILEACKKNGIHVTAYSPL 217 (322)
Q Consensus 193 ~~~~---~~~ll~~~~~~gi~via~~pl 217 (322)
..-. ...+..+|+++|+.+++..-+
T Consensus 272 ~~GGit~~~~i~~~A~~~g~~~~~~~~~ 299 (375)
T 1r0m_A 272 RVGGHAESRRVHDVAQSFGAPVWCGGML 299 (375)
T ss_dssp TTTSHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred hhcCHHHHHHHHHHHHHcCCcEEecCcc
Confidence 5432 267999999999997664444
No 64
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=64.79 E-value=82 Score=28.51 Aligned_cols=151 Identities=13% Similarity=0.107 Sum_probs=89.0
Q ss_pred CChhHHHHHHHHHHHcCCCeEec--CC----------CcC--CHHHHH------HHHHHHHhcCCCCCcEEEEecCCCCC
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDT--AK----------QYG--VQENIG------LALKEAMQTGIQRKDLFVTSKLWCAD 93 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DT--A~----------~Yg--~e~~lG------~~l~~~~~~~~~R~~~~i~tK~~~~~ 93 (322)
.+.++..+....+.+.|++.|.. +. .|| .+..+. +++++.+ .+++-|..... ..
T Consensus 136 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~-----G~d~~l~vD~n-~~ 209 (392)
T 2poz_A 136 DTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAA-----GPEIELMVDLS-GG 209 (392)
T ss_dssp CSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHH-----CTTSEEEEECT-TC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhc-----CCCCEEEEECC-CC
Confidence 35667777788889999998874 21 133 112222 2333321 23555665653 23
Q ss_pred CChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCC-CHHH
Q 041428 94 LSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNF-TLKK 172 (322)
Q Consensus 94 ~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~-~~~~ 172 (322)
++.+...+-++. |+.+ ++.++..|-+. +-++.+.++++.-.|-=.+--++ +++.
T Consensus 210 ~~~~~a~~~~~~-l~~~-----~i~~iE~P~~~-------------------~~~~~~~~l~~~~~ipIa~dE~~~~~~~ 264 (392)
T 2poz_A 210 LTTDETIRFCRK-IGEL-----DICFVEEPCDP-------------------FDNGALKVISEQIPLPIAVGERVYTRFG 264 (392)
T ss_dssp SCHHHHHHHHHH-HGGG-----CEEEEECCSCT-------------------TCHHHHHHHHHHCSSCEEECTTCCHHHH
T ss_pred CCHHHHHHHHHH-HHhc-----CCCEEECCCCc-------------------ccHHHHHHHHhhCCCCEEecCCcCCHHH
Confidence 455444333332 4443 45566665331 23566777777666665554444 5788
Q ss_pred HHHHHhhcCCCCceeceeeCCCCC---cHHHHHHHHHcCceEEEeccC
Q 041428 173 LNKLLNFAKTKPSVCQMEMHPGWR---NDKILEACKKNGIHVTAYSPL 217 (322)
Q Consensus 173 l~~~~~~~~~~~~~~q~~~~~~~~---~~~ll~~~~~~gi~via~~pl 217 (322)
++++++.... +++|+..+..-. ...+..+|+++|+.++.++..
T Consensus 265 ~~~~i~~~~~--d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~~~ 310 (392)
T 2poz_A 265 FRKIFELQAC--GIIQPDIGTAGGLMETKKICAMAEAYNMRVAPHVCG 310 (392)
T ss_dssp HHHHHTTTCC--SEECCCTTTSSCHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred HHHHHHcCCC--CEEecCccccCCHHHHHHHHHHHHHcCCeEecCCCC
Confidence 8888876543 777876654322 267999999999999887654
No 65
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=63.97 E-value=91 Score=28.77 Aligned_cols=147 Identities=16% Similarity=0.101 Sum_probs=84.0
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCCCcCCHH---HHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHh
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAKQYGVQE---NIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQEL 110 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~---~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~L 110 (322)
.+.++..+....+.+.|++.|-.--. ++-+ ..=+++++.+ .+++-|..... ..++.+...+-++. |+.+
T Consensus 197 ~~~e~~~~~a~~~~~~Gf~~vKik~g-~~~~~d~e~v~avR~a~-----G~d~~l~vDan-~~~~~~~a~~~~~~-l~~~ 268 (441)
T 2hxt_A 197 YSDEKLVRLAKEAVADGFRTIKLKVG-ANVQDDIRRCRLARAAI-----GPDIAMAVDAN-QRWDVGPAIDWMRQ-LAEF 268 (441)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECC-SCHHHHHHHHHHHHHHH-----CSSSEEEEECT-TCCCHHHHHHHHHT-TGGG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccC-CCHHHHHHHHHHHHHhc-----CCCCeEEEECC-CCCCHHHHHHHHHH-HHhc
Confidence 46677778888899999999874211 1211 1224455532 23444554442 24455444333333 5555
Q ss_pred CCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHc-CCcc-EEEecCCCHHHHHHHHhhcCCCCceec
Q 041428 111 QLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKD-GLVR-DVGVCNFTLKKLNKLLNFAKTKPSVCQ 188 (322)
Q Consensus 111 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~-Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q 188 (322)
+++ ++..|-+. +-++.+.++++. +.|- ..|=+-+++..+.++++.... +++|
T Consensus 269 ~i~-----~iEqP~~~-------------------~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~v~ 322 (441)
T 2hxt_A 269 DIA-----WIEEPTSP-------------------DDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAV--DLIQ 322 (441)
T ss_dssp CCS-----CEECCSCT-------------------TCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCC--SEEC
T ss_pred CCC-----eeeCCCCH-------------------HHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCC--CEEE
Confidence 544 44555321 234556666665 2232 334455678999999887554 7777
Q ss_pred eeeCCCCC---cHHHHHHHHHcCceEEEe
Q 041428 189 MEMHPGWR---NDKILEACKKNGIHVTAY 214 (322)
Q Consensus 189 ~~~~~~~~---~~~ll~~~~~~gi~via~ 214 (322)
+..+-.-. ...+..+|+++|+.+..+
T Consensus 323 ik~~~~GGite~~~ia~~A~~~g~~~~~h 351 (441)
T 2hxt_A 323 IDAARVGGVNENLAILLLAAKFGVRVFPH 351 (441)
T ss_dssp CCTTTSSHHHHHHHHHHHHHHTTCEECCC
T ss_pred eCcceeCCHHHHHHHHHHHHHcCCeEEEe
Confidence 76654322 257899999999998543
No 66
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=63.38 E-value=88 Score=28.38 Aligned_cols=150 Identities=11% Similarity=0.031 Sum_probs=90.3
Q ss_pred cCChhHHHHHHHHHHHcCCCeEecCCCcCC--HHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHh
Q 041428 33 KSGDEAFKSVFTAIVEGGYRHIDTAKQYGV--QENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQEL 110 (322)
Q Consensus 33 ~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~--e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~L 110 (322)
..+.++..+..+.+++.|++.|..=-.-.. ...+=+++++.+ .+++-|..+.. ..++.+...+ +-+.|+.+
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~iKiKvG~~~~~d~~~v~avR~a~-----g~d~~l~vDan-~~~~~~~A~~-~~~~l~~~ 221 (389)
T 3ozy_A 149 DLTPDQAADELAGWVEQGFTAAKLKVGRAPRKDAANLRAMRQRV-----GADVEILVDAN-QSLGRHDALA-MLRILDEA 221 (389)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH-----CTTSEEEEECT-TCCCHHHHHH-HHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHCCCCEEeeccCCCHHHHHHHHHHHHHHc-----CCCceEEEECC-CCcCHHHHHH-HHHHHHhc
Confidence 456777888888999999999985321111 112234555542 23455666653 2445444332 33456666
Q ss_pred CCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHH-HcCCccEEEe-cCCCHHHHHHHHhhcCCCCceec
Q 041428 111 QLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLV-KDGLVRDVGV-CNFTLKKLNKLLNFAKTKPSVCQ 188 (322)
Q Consensus 111 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~-~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~~~q 188 (322)
+++ ++..|-+. +-++.+.+++ +.-.|-=.+- +-++.+.+.++++.... +++|
T Consensus 222 ~i~-----~iEqP~~~-------------------~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~--d~v~ 275 (389)
T 3ozy_A 222 GCY-----WFEEPLSI-------------------DDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAI--DVLQ 275 (389)
T ss_dssp TCS-----EEESCSCT-------------------TCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCC--SEEC
T ss_pred CCC-----EEECCCCc-------------------ccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCC--CEEE
Confidence 644 34554321 2255677787 6655543333 33467888888876554 7888
Q ss_pred eeeCCCCC---cHHHHHHHHHcCceEEEec
Q 041428 189 MEMHPGWR---NDKILEACKKNGIHVTAYS 215 (322)
Q Consensus 189 ~~~~~~~~---~~~ll~~~~~~gi~via~~ 215 (322)
+.....-. ...+..+|+++|+.++.++
T Consensus 276 ik~~~~GGit~~~~ia~~A~~~gi~~~~h~ 305 (389)
T 3ozy_A 276 ADASRAGGITEALAISASAASAHLAWNPHT 305 (389)
T ss_dssp CCTTTSSCHHHHHHHHHHHHHTTCEECCCC
T ss_pred eCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 87655432 2679999999999998774
No 67
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=61.42 E-value=94 Score=28.10 Aligned_cols=150 Identities=13% Similarity=0.057 Sum_probs=86.1
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcCC---HHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYGV---QENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQ 111 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~---e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg 111 (322)
+.++..+....+++.|++.|..=-.-++ ...+=+++++.+ .+++.|..... ..++.+...+-++. |+.++
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~-----g~~~~l~vDan-~~~~~~~a~~~~~~-l~~~~ 237 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEI-----GKDAQLAVDAN-GRFNLETGIAYAKM-LRDYP 237 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHH-----TTTCEEEEECT-TCCCHHHHHHHHHH-HTTSC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhc-----CCCCeEEEECC-CCCCHHHHHHHHHH-HHHcC
Confidence 5667777778888999998874211122 111223444432 23455555552 23454444333322 44444
Q ss_pred CCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecC-CCHHHHHHHHhhcCC--CCceec
Q 041428 112 LDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCN-FTLKKLNKLLNFAKT--KPSVCQ 188 (322)
Q Consensus 112 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~-~~~~~l~~~~~~~~~--~~~~~q 188 (322)
+ .++..|-+. +-++.+.++++.-.|-=.+--+ ++.+.++++++.... ..+++|
T Consensus 238 i-----~~iEqP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ 293 (392)
T 1tzz_A 238 L-----FWYEEVGDP-------------------LDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQ 293 (392)
T ss_dssp C-----SEEECCSCT-------------------TCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEEC
T ss_pred C-----CeecCCCCh-------------------hhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEE
Confidence 3 345555321 3366677777766665444333 468889999887621 236777
Q ss_pred eeeCCCCC---cHHHHHHHHHcCce---EEEec
Q 041428 189 MEMHPGWR---NDKILEACKKNGIH---VTAYS 215 (322)
Q Consensus 189 ~~~~~~~~---~~~ll~~~~~~gi~---via~~ 215 (322)
+..+..-. ...+..+|+++|+. ++.++
T Consensus 294 ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~~~ 326 (392)
T 1tzz_A 294 FDCALSYGLCEYQRTLEVLKTHGWSPSRCIPHG 326 (392)
T ss_dssp CCTTTTTCHHHHHHHHHHHHHTTCCGGGBCCSC
T ss_pred ECccccCCHHHHHHHHHHHHHCCCCCceEeecH
Confidence 76544322 26799999999999 87764
No 68
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=61.07 E-value=90 Score=27.88 Aligned_cols=147 Identities=19% Similarity=0.119 Sum_probs=83.8
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcC-CHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhCCC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYG-VQENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQLD 113 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg-~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~d 113 (322)
+.++..+...++++.|++.|..=-.-. ..+.+ +++++. + +++-|..... ..++.+. .+ +-+.|+.++
T Consensus 141 ~~~~~~~~a~~~~~~G~~~iKik~~~~~d~~~v-~avr~a----~--~~~~l~vDan-~~~~~~~-~~-~~~~l~~~~-- 208 (369)
T 2zc8_A 141 SVEDTLRVVERHLEEGYRRIKLKIKPGWDYEVL-KAVREA----F--PEATLTADAN-SAYSLAN-LA-QLKRLDELR-- 208 (369)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEECBTTBSHHHH-HHHHHH----C--TTSCEEEECT-TCCCGGG-HH-HHHGGGGGC--
T ss_pred CHHHHHHHHHHHHHhhhheeeeecChhHHHHHH-HHHHHH----c--CCCeEEEecC-CCCCHHH-HH-HHHHHHhCC--
Confidence 456666777888899999876421101 22333 566665 2 3333443432 2345555 33 333355554
Q ss_pred ccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEE-ecCCCHHHHHHHHhhcCCCCceeceeeC
Q 041428 114 YLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVG-VCNFTLKKLNKLLNFAKTKPSVCQMEMH 192 (322)
Q Consensus 114 ~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iG-vs~~~~~~l~~~~~~~~~~~~~~q~~~~ 192 (322)
+.++..|-+. +-++.+.+++++-.|--.+ =+-++...+.++++.... +++|+..+
T Consensus 209 ---i~~iEqP~~~-------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~--d~v~ik~~ 264 (369)
T 2zc8_A 209 ---LDYIEQPLAY-------------------DDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAG--RVFNVKPA 264 (369)
T ss_dssp ---CSCEECCSCT-------------------TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCC--SEEEECHH
T ss_pred ---CcEEECCCCc-------------------ccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCC--CEEEEchh
Confidence 4445555331 2244566666655554333 344578899999887554 77777654
Q ss_pred CC---CCcHHHHHHHHHcCceEEEeccC
Q 041428 193 PG---WRNDKILEACKKNGIHVTAYSPL 217 (322)
Q Consensus 193 ~~---~~~~~ll~~~~~~gi~via~~pl 217 (322)
.. .....+..+|+++|+.+++..-+
T Consensus 265 ~~GGit~~~~i~~~A~~~g~~~~~~~~~ 292 (369)
T 2zc8_A 265 RLGGHGESLRVHALAESAGIPLWMGGML 292 (369)
T ss_dssp HHTSHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred hhCCHHHHHHHHHHHHHcCCcEEecCcc
Confidence 32 22267999999999997664444
No 69
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=60.95 E-value=1e+02 Score=28.35 Aligned_cols=147 Identities=14% Similarity=0.148 Sum_probs=87.5
Q ss_pred CCh-hHHHHHHHHHHHcCCCeEecCCCcC---CHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHH
Q 041428 34 SGD-EAFKSVFTAIVEGGYRHIDTAKQYG---VQENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQE 109 (322)
Q Consensus 34 ~~~-~~~~~~l~~Al~~Gi~~~DTA~~Yg---~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~ 109 (322)
.+. ++..+...++.+.|++.|..=-... ..+.+ +++++.+ .+++-|..... ..++.+...+-++. |+.
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v-~avR~av-----G~d~~l~vDan-~~~~~~eai~~~~~-L~~ 254 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGDAARVDIERV-RHVRKVL-----GDEVDILTDAN-TAYTMADARRVLPV-LAE 254 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCSCHHHHHHHH-HHHHHHH-----CTTSEEEEECT-TCCCHHHHHHHHHH-HHH
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH-HHHHHhc-----CCCCEEEEECC-CCCCHHHHHHHHHH-HHh
Confidence 345 6667777888899999887521111 11222 3455432 23455555552 34566665554443 777
Q ss_pred hCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCC-ccEEEe-cCCCHHHHHHHHhhcCCCCcee
Q 041428 110 LQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGL-VRDVGV-CNFTLKKLNKLLNFAKTKPSVC 187 (322)
Q Consensus 110 Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gk-ir~iGv-s~~~~~~l~~~~~~~~~~~~~~ 187 (322)
+++++ +..|-+. +-++.+.+++++-. |-=.+- +-++.+.++++++... .+++
T Consensus 255 ~~i~~-----iEqP~~~-------------------~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~--~d~v 308 (428)
T 3bjs_A 255 IQAGW-----LEEPFAC-------------------NDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGA--VQVW 308 (428)
T ss_dssp TTCSC-----EECCSCT-------------------TCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCC--EEEE
T ss_pred cCCCE-----EECCCCc-------------------cCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCC--CCEE
Confidence 77654 3444321 23566777776544 544443 3346888888887644 3777
Q ss_pred ceeeCCCCC---cHHHHHHHHHcCceEEEe
Q 041428 188 QMEMHPGWR---NDKILEACKKNGIHVTAY 214 (322)
Q Consensus 188 q~~~~~~~~---~~~ll~~~~~~gi~via~ 214 (322)
|+..+..-. ...+..+|+++|+.++..
T Consensus 309 ~ik~~~~GGitea~~ia~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 309 QPDLSKCGGITEGIRIAAMASAYRIPINAH 338 (428)
T ss_dssp CCBTTTSSCHHHHHHHHHHHHHTTCCBCCB
T ss_pred EeCccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 776654322 267999999999998887
No 70
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=60.38 E-value=28 Score=29.33 Aligned_cols=69 Identities=13% Similarity=-0.072 Sum_probs=46.5
Q ss_pred ccHHHHHHHHHHHHHc-CCccEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEE
Q 041428 142 FDMEGVWREMEKLVKD-GLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTA 213 (322)
Q Consensus 142 ~~~~~~~~~L~~l~~~-Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via 213 (322)
...-+++++|.++++. ++|..+|..+... .+..+.+..+. .+.+..|.-...-...+..+++.|+.++.
T Consensus 90 vs~~Dil~aL~~a~~~~~kIavVg~~~~~~-~~~~i~~ll~~--~i~~~~~~~~ee~~~~i~~l~~~G~~vVV 159 (225)
T 2pju_A 90 PSGYDVLQFLAKAGKLTSSIGVVTYQETIP-ALVAFQKTFNL--RLDQRSYITEEDARGQINELKANGTEAVV 159 (225)
T ss_dssp CCHHHHHHHHHHTTCTTSCEEEEEESSCCH-HHHHHHHHHTC--CEEEEEESSHHHHHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHHHHHhhCCcEEEEeCchhhh-HHHHHHHHhCC--ceEEEEeCCHHHHHHHHHHHHHCCCCEEE
Confidence 3467899999999876 5677777777753 23444444333 45555554333337799999999999976
No 71
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=60.14 E-value=92 Score=27.55 Aligned_cols=151 Identities=10% Similarity=0.014 Sum_probs=88.6
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcCC---HHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYGV---QENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQ 111 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~---e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg 111 (322)
+.++..+...++.+.|++.|-.=-.... .+.+ +++++. | +++-|..-.. ..++.+...+-+ +.|+.++
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~d~~~v-~avr~~---g---~~~~l~vDan-~~~~~~~a~~~~-~~l~~~~ 209 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAV-EEIAKV---T---RGAKYIVDAN-MGYTQKEAVEFA-RAVYQKG 209 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHH-HHHHHH---S---TTCEEEEECT-TCSCHHHHHHHH-HHHHHTT
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecCCHHHHHHHH-HHHHhh---C---CCCeEEEECC-CCCCHHHHHHHH-HHHHhcC
Confidence 4566667778888999999874211111 1222 445543 2 3343433332 345555555444 3367766
Q ss_pred CCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEe-cCCCHHHHHHHHhhcCCCCceecee
Q 041428 112 LDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGV-CNFTLKKLNKLLNFAKTKPSVCQME 190 (322)
Q Consensus 112 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~~~q~~ 190 (322)
++ ..++..|-+. +-++.+.++++.-.|--.+- +-++.+.+.++++.... +++|+.
T Consensus 210 i~---~~~iE~P~~~-------------------~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~--d~v~ik 265 (345)
T 2zad_A 210 ID---IAVYEQPVRR-------------------EDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAV--DYVNIK 265 (345)
T ss_dssp CC---CSEEECCSCT-------------------TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCC--SEEEEC
T ss_pred CC---eeeeeCCCCc-------------------ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCC--CEEEEe
Confidence 54 1245555321 23556777777655554443 34578889999887554 777775
Q ss_pred eCC--CCCcHHHHHHHHHcCceEEEeccCC
Q 041428 191 MHP--GWRNDKILEACKKNGIHVTAYSPLG 218 (322)
Q Consensus 191 ~~~--~~~~~~ll~~~~~~gi~via~~pl~ 218 (322)
.+- +.....+...|+++|+.++.++.+.
T Consensus 266 ~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 295 (345)
T 2zad_A 266 LMKSGISDALAIVEIAESSGLKLMIGCMGE 295 (345)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEECCSSC
T ss_pred cccccHHHHHHHHHHHHHcCCeEEEecCcc
Confidence 443 2222678999999999999887653
No 72
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=59.92 E-value=95 Score=27.66 Aligned_cols=150 Identities=13% Similarity=0.127 Sum_probs=90.6
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcCC--HHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhCC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYGV--QENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQL 112 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~--e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~ 112 (322)
+.++..+..+.+++.|++.|-.=-.-.. +...=+++++.+ .+++-|..... ..++.+.. .+-++.|.
T Consensus 139 ~~~~~~~~a~~~~~~G~~~~K~K~g~~~~~d~~~v~avR~a~-----g~~~~l~vDan-~~~~~~~a----~~~~~~L~- 207 (354)
T 3jva_A 139 EPNVMAQKAVEKVKLGFDTLKIKVGTGIEADIARVKAIREAV-----GFDIKLRLDAN-QAWTPKDA----VKAIQALA- 207 (354)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH-----CTTSEEEEECT-TCSCHHHH----HHHHHHTT-
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHHHHHc-----CCCCeEEEECC-CCCCHHHH----HHHHHHHH-
Confidence 5566777778888999999875322111 222334555542 24455555552 23343332 23344443
Q ss_pred CccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEE-EecCCCHHHHHHHHhhcCCCCceeceee
Q 041428 113 DYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDV-GVCNFTLKKLNKLLNFAKTKPSVCQMEM 191 (322)
Q Consensus 113 d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~i-Gvs~~~~~~l~~~~~~~~~~~~~~q~~~ 191 (322)
..++.++..|-+. +-++.+.+++++-.|-=. |=+-++.+.+.++++.... +++|+..
T Consensus 208 -~~~i~~iEqP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~--d~v~~k~ 265 (354)
T 3jva_A 208 -DYQIELVEQPVKR-------------------RDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTV--DVINIKL 265 (354)
T ss_dssp -TSCEEEEECCSCT-------------------TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCC--SEEEECH
T ss_pred -hcCCCEEECCCCh-------------------hhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCC--CEEEECc
Confidence 3567777766432 125667777776555333 3345678888888887554 6777765
Q ss_pred CCCC---CcHHHHHHHHHcCceEEEeccC
Q 041428 192 HPGW---RNDKILEACKKNGIHVTAYSPL 217 (322)
Q Consensus 192 ~~~~---~~~~ll~~~~~~gi~via~~pl 217 (322)
+..- ....+..+|+++|+.++..+.+
T Consensus 266 ~~~GGit~~~~i~~~A~~~gi~~~~~~~~ 294 (354)
T 3jva_A 266 MKCGGIHEALKINQICETAGIECMIGCMA 294 (354)
T ss_dssp HHHTSHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred hhcCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 4332 2267999999999999988777
No 73
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=57.92 E-value=1.1e+02 Score=27.56 Aligned_cols=148 Identities=14% Similarity=0.082 Sum_probs=88.2
Q ss_pred CChhHHHHHHHHHHHcCCCeEec--CCC-cC---C-H--HHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHH
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDT--AKQ-YG---V-Q--ENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALN 104 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DT--A~~-Yg---~-e--~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~ 104 (322)
.+.++..+...++.+.|++.|.. +.. |+ . + ..+=+++++.+ .+++-|..+.. ..++.+...+-+
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~-----g~d~~l~vDan-~~~~~~~a~~~~- 220 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAV-----GPDIRLMIDAF-HWYSRTDALALG- 220 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHH-----CTTSEEEEECC-TTCCHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHh-----CCCCeEEEECC-CCCCHHHHHHHH-
Confidence 35566777788888999999873 322 22 1 1 11223444432 23555666653 344555544433
Q ss_pred HHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEec-CCC-HHHHHHHHhhcCC
Q 041428 105 NTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVC-NFT-LKKLNKLLNFAKT 182 (322)
Q Consensus 105 ~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs-~~~-~~~l~~~~~~~~~ 182 (322)
+.|+.++++ ++..|-+. +-++.+.++++.-.|-=.+-- -++ ++.++++++....
T Consensus 221 ~~l~~~~i~-----~iE~P~~~-------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~ 276 (382)
T 1rvk_A 221 RGLEKLGFD-----WIEEPMDE-------------------QSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGAC 276 (382)
T ss_dssp HHHHTTTCS-----EEECCSCT-------------------TCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCC
T ss_pred HHHHhcCCC-----EEeCCCCh-------------------hhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCC
Confidence 346655544 44555321 235667777776555544443 346 7889999887554
Q ss_pred CCceeceeeCCC---CCcHHHHHHHHHcCceEEEe
Q 041428 183 KPSVCQMEMHPG---WRNDKILEACKKNGIHVTAY 214 (322)
Q Consensus 183 ~~~~~q~~~~~~---~~~~~ll~~~~~~gi~via~ 214 (322)
+++|+..+.. .....+..+|+++|+.++.+
T Consensus 277 --d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 277 --DILRTGVNDVGGITPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp --SEEEECHHHHTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred --CEEeeCchhcCCHHHHHHHHHHHHHcCCeEeec
Confidence 7777765432 22267999999999999987
No 74
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=57.23 E-value=54 Score=29.79 Aligned_cols=40 Identities=8% Similarity=-0.097 Sum_probs=28.7
Q ss_pred HHHHHHHHHcCCccEEEecCCCHHHHHHHHhhcCCCCceece
Q 041428 148 WREMEKLVKDGLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQM 189 (322)
Q Consensus 148 ~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~ 189 (322)
++.+.++++.=.+--|+...++++..+++++.+.. +.+++
T Consensus 288 ~~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l~~g~a--D~V~i 327 (377)
T 2r14_A 288 EGFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTA--DAVAF 327 (377)
T ss_dssp TTHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSC--SEEEE
T ss_pred HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCc--eEEee
Confidence 34455666665677788888889999999987654 55555
No 75
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=57.22 E-value=1.1e+02 Score=27.47 Aligned_cols=153 Identities=9% Similarity=0.057 Sum_probs=89.8
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCCCcC--CHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhC
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAKQYG--VQENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQ 111 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg--~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg 111 (322)
.+.++..+..+.+++.|++.|-.=-... .+...=+++++.+ .+++-|..... ..++.+...+ +-+.|+.++
T Consensus 139 ~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~d~~~v~avR~~~-----g~~~~l~vDaN-~~~~~~~A~~-~~~~l~~~~ 211 (368)
T 3q45_A 139 DEPHKMAADAVQIKKNGFEIIKVKVGGSKELDVERIRMIREAA-----GDSITLRIDAN-QGWSVETAIE-TLTLLEPYN 211 (368)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH-----CSSSEEEEECT-TCBCHHHHHH-HHHHHGGGC
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecCCHHHHHHHHHHHHHHh-----CCCCeEEEECC-CCCChHHHHH-HHHHHhhcC
Confidence 3567777777888899999986432211 1222334555542 23444555542 3344443322 333445544
Q ss_pred CCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEE-EecCCCHHHHHHHHhhcCCCCceecee
Q 041428 112 LDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDV-GVCNFTLKKLNKLLNFAKTKPSVCQME 190 (322)
Q Consensus 112 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~i-Gvs~~~~~~l~~~~~~~~~~~~~~q~~ 190 (322)
+ .++..|-+. +-++.+.++++.-.|--. |=+-++...+.++++.... +++|+.
T Consensus 212 i-----~~iEqP~~~-------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~--d~v~~k 265 (368)
T 3q45_A 212 I-----QHCEEPVSR-------------------NLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQAC--DSFNLK 265 (368)
T ss_dssp C-----SCEECCBCG-------------------GGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCC--SEEEEC
T ss_pred C-----CEEECCCCh-------------------hHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCC--CeEEec
Confidence 4 344444331 234557777776555433 3355678899999886544 788887
Q ss_pred eCCCCC---cHHHHHHHHHcCceEEEeccCCC
Q 041428 191 MHPGWR---NDKILEACKKNGIHVTAYSPLGS 219 (322)
Q Consensus 191 ~~~~~~---~~~ll~~~~~~gi~via~~pl~~ 219 (322)
....-. ...+..+|+++|+.++..+.+.+
T Consensus 266 ~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 297 (368)
T 3q45_A 266 LSKSAGITNALNIIRLAEQAHMPVQVGGFLES 297 (368)
T ss_dssp TTTTTSHHHHHHHHHHHHHTTCCEEECCSSCC
T ss_pred hhhcCCHHHHHHHHHHHHHcCCcEEecCcccc
Confidence 655432 26799999999999998766543
No 76
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=55.28 E-value=46 Score=29.64 Aligned_cols=92 Identities=17% Similarity=0.137 Sum_probs=61.5
Q ss_pred HHhCCCccceeEe-ecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEec-----CCCHHHHHHHHhhcC
Q 041428 108 QELQLDYLDLYLI-HWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVC-----NFTLKKLNKLLNFAK 181 (322)
Q Consensus 108 ~~Lg~d~iDl~~l-H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs-----~~~~~~l~~~~~~~~ 181 (322)
+..|.|.||+-.- -.|... +...++..+.++.+++.-.+ -|.|- +++++.++++++.+.
T Consensus 91 ~~~GAdiIDIg~eStrP~~~--------------~vs~ee~~~~V~~v~~~~~v-PlsIDg~~~~T~~~eV~eaAleaga 155 (323)
T 4djd_D 91 AEYGADLIYLKLDGADPEGA--------------NHSVDQCVATVKEVLQAVGV-PLVVVGCGDVEKDHEVLEAVAEAAA 155 (323)
T ss_dssp HTTCCSEEEEECGGGCTTTT--------------CCCHHHHHHHHHHHHHHCCS-CEEEECCSCHHHHHHHHHHHHHHTT
T ss_pred HHcCCCEEEEcCccCCCCCC--------------CCCHHHHHHHHHHHHhhCCc-eEEEECCCCCCCCHHHHHHHHHhcC
Confidence 7789888887432 223211 24456667777777765222 36666 777899999999875
Q ss_pred C-CCceeceeeCCCCCcHHHHHHHHHcCceEEEeccC
Q 041428 182 T-KPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPL 217 (322)
Q Consensus 182 ~-~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl 217 (322)
. ++.++-+... +-.++++.++++|..|+++.|.
T Consensus 156 g~~~lINsv~~~---~~~~m~~laa~~g~~vVlmh~~ 189 (323)
T 4djd_D 156 GENLLLGNAEQE---NYKSLTAACMVHKHNIIARSPL 189 (323)
T ss_dssp TSCCEEEEEBTT---BCHHHHHHHHHHTCEEEEECSS
T ss_pred CCCCeEEECCcc---cHHHHHHHHHHhCCeEEEEccc
Confidence 3 4455544332 2368999999999999998863
No 77
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=53.35 E-value=77 Score=27.83 Aligned_cols=120 Identities=9% Similarity=0.005 Sum_probs=67.8
Q ss_pred ccHHHHHHHHHHHHHcCCccEEEecCCC-----HHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEecc
Q 041428 142 FDMEGVWREMEKLVKDGLVRDVGVCNFT-----LKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSP 216 (322)
Q Consensus 142 ~~~~~~~~~L~~l~~~Gkir~iGvs~~~-----~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~p 216 (322)
.+.+++.+.++++++.| ++.|-+++-. .+.+.++++...-. -+.+..+......+.++..++.|+..+..+.
T Consensus 84 ls~eei~~~i~~~~~~g-~~~i~~~gGe~p~~~~~~~~~li~~i~~~--~~~i~~s~g~l~~e~l~~L~~ag~~~v~i~l 160 (348)
T 3iix_A 84 MTPEEIVERARLAVQFG-AKTIVLQSGEDPYXMPDVISDIVKEIKKM--GVAVTLSLGEWPREYYEKWKEAGADRYLLRH 160 (348)
T ss_dssp CCHHHHHHHHHHHHHTT-CSEEEEEESCCGGGTTHHHHHHHHHHHTT--SCEEEEECCCCCHHHHHHHHHHTCCEEECCC
T ss_pred CCHHHHHHHHHHHHHCC-CCEEEEEeCCCCCccHHHHHHHHHHHHhc--CceEEEecCCCCHHHHHHHHHhCCCEEeeee
Confidence 46789999999999887 5566555332 24555555543321 1233345555567889999999987776432
Q ss_pred CCCCCCCCCCCCCHHHHHHHHhcCCCHHHHHHHHhhhcC----CEEecCC--CCHHHHHHhH
Q 041428 217 LGSQGAGRDLIHDPTVERIAKKLNKSPGQILLKWGIHRG----TSVIPKS--THPDRIKENI 272 (322)
Q Consensus 217 l~~~G~l~~~~~~~~l~~la~~~~~s~~qlal~~~l~~~----~~~i~g~--~~~~~l~~nl 272 (322)
= -...+..+.+.......-.--+++++...| ..+++|. .+.+++.+.+
T Consensus 161 e--------t~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~et~e~~~~~~ 214 (348)
T 3iix_A 161 E--------TANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDL 214 (348)
T ss_dssp B--------CSCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEECBEESCTTCCHHHHHHHH
T ss_pred e--------eCCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeeccceEEeCCCCCHHHHHHHH
Confidence 2 223344444443331112223455555555 3456666 6777766554
No 78
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=51.91 E-value=1.3e+02 Score=26.97 Aligned_cols=152 Identities=12% Similarity=0.137 Sum_probs=89.0
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhCCC
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQLD 113 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~d 113 (322)
.+.++..+..+.+++.|++.|..=-.-..+..+ +.++.. ++.+ .+++-|..+.. ..++.+... +.++.|.
T Consensus 144 ~~~e~~~~~a~~~~~~G~~~iKiK~G~~~~~d~-~~v~av-R~a~-g~~~~l~vDan-~~~~~~~a~----~~~~~l~-- 213 (378)
T 3eez_A 144 KSVEETRAVIDRYRQRGYVAHSVKIGGDVERDI-ARIRDV-EDIR-EPGEIVLYDVN-RGWTRQQAL----RVMRATE-- 213 (378)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCSCHHHHH-HHHHHH-TTSC-CTTCEEEEECT-TCCCHHHHH----HHHHHTG--
T ss_pred CCHHHHHHHHHHHHhCCCCEEEeccCCCHHHHH-HHHHHH-HHHc-CCCceEEEECC-CCCCHHHHH----HHHHHhc--
Confidence 456777778888899999999853221111211 122221 1111 24566666663 234444322 2333332
Q ss_pred ccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEE-EecCCCHHHHHHHHhhcCCCCceeceeeC
Q 041428 114 YLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDV-GVCNFTLKKLNKLLNFAKTKPSVCQMEMH 192 (322)
Q Consensus 114 ~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~i-Gvs~~~~~~l~~~~~~~~~~~~~~q~~~~ 192 (322)
..++ ++..|- + -++.+.++++.-.|--. |=+-++.+.+.++++.... +++|+...
T Consensus 214 ~~~i-~iEqP~------------------~---~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~--d~v~ik~~ 269 (378)
T 3eez_A 214 DLHV-MFEQPG------------------E---TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLA--EVFGIKLN 269 (378)
T ss_dssp GGTC-CEECCS------------------S---SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCC--SEEEEEHH
T ss_pred cCCe-EEecCC------------------C---CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCC--CEEEeCch
Confidence 2345 555442 2 35667778777665433 3345678889999887554 77888654
Q ss_pred CCC---CcHHHHHHHHHcCceEEEeccCCC
Q 041428 193 PGW---RNDKILEACKKNGIHVTAYSPLGS 219 (322)
Q Consensus 193 ~~~---~~~~ll~~~~~~gi~via~~pl~~ 219 (322)
..- ....+..+|+++|+.++..+.+.+
T Consensus 270 ~~GGit~~~~ia~~A~~~g~~~~~~~~~es 299 (378)
T 3eez_A 270 RVGGLTRAARMRDIALTHGIDMFVMATGGS 299 (378)
T ss_dssp HHTSHHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred hcCCHHHHHHHHHHHHHcCCEEEcCCCCCC
Confidence 432 226799999999999998877654
No 79
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=51.27 E-value=1.3e+02 Score=26.92 Aligned_cols=39 Identities=13% Similarity=0.049 Sum_probs=29.3
Q ss_pred HHHHHHHHcCCccEEEecCCCHHHHHHHHhhcCCCCceece
Q 041428 149 REMEKLVKDGLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQM 189 (322)
Q Consensus 149 ~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~ 189 (322)
+.+.++++.=.+--|+...++++..+++++.+.. +.+++
T Consensus 284 ~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~a--D~V~~ 322 (364)
T 1vyr_A 284 AFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLI--DAVAF 322 (364)
T ss_dssp HHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSC--SEEEE
T ss_pred HHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCc--cEEEE
Confidence 4566677766777888888899999999987654 55555
No 80
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=50.13 E-value=1.4e+02 Score=26.58 Aligned_cols=153 Identities=10% Similarity=0.108 Sum_probs=89.8
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcCCH---HHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYGVQ---ENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQ 111 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e---~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg 111 (322)
+.++..+....+.+.|++.|..=-.-++- ...=+++++.+ .+++-|..+.. ..++.+...+-++. |+..+
T Consensus 140 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a~-----g~~~~l~vDan-~~~~~~~a~~~~~~-l~~~~ 212 (366)
T 1tkk_A 140 SPEEMAADAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRV-----GSAVKLRLDAN-QGWRPKEAVTAIRK-MEDAG 212 (366)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHHH-----CSSSEEEEECT-TCSCHHHHHHHHHH-HHHTT
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHHh-----CCCCeEEEECC-CCCCHHHHHHHHHH-HhhcC
Confidence 45666677788889999998852111121 11223444432 23455666653 34455554444333 55511
Q ss_pred CCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEe-cCCCHHHHHHHHhhcCCCCceecee
Q 041428 112 LDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGV-CNFTLKKLNKLLNFAKTKPSVCQME 190 (322)
Q Consensus 112 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~~~q~~ 190 (322)
.++.++..|-+. +-++.+.++++.-.|--.+- +-++.+.+.++++.... +++|+.
T Consensus 213 ---~~i~~iEqP~~~-------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~--d~v~ik 268 (366)
T 1tkk_A 213 ---LGIELVEQPVHK-------------------DDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSA--DLINIK 268 (366)
T ss_dssp ---CCEEEEECCSCT-------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCC--SEEEEC
T ss_pred ---CCceEEECCCCc-------------------ccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCC--CEEEee
Confidence 345566665321 23566777776655544433 44578888988877554 777776
Q ss_pred eCCCC---CcHHHHHHHHHcCceEEEeccCC
Q 041428 191 MHPGW---RNDKILEACKKNGIHVTAYSPLG 218 (322)
Q Consensus 191 ~~~~~---~~~~ll~~~~~~gi~via~~pl~ 218 (322)
.+..- ....+..+|+++|+.++..+.+.
T Consensus 269 ~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 299 (366)
T 1tkk_A 269 LMKAGGISGAEKINAMAEACGVECMVGSMIE 299 (366)
T ss_dssp HHHHTSHHHHHHHHHHHHHHTCCEEECCSSC
T ss_pred hhhhcCHHHHHHHHHHHHHcCCcEEecCccc
Confidence 54322 22678999999999998877653
No 81
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=50.05 E-value=97 Score=27.35 Aligned_cols=89 Identities=12% Similarity=0.089 Sum_probs=61.9
Q ss_pred HhCCCccceeEee-cCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHc-CCccEEEe-cC----CCHHHHHHHHhhcC
Q 041428 109 ELQLDYLDLYLIH-WPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKD-GLVRDVGV-CN----FTLKKLNKLLNFAK 181 (322)
Q Consensus 109 ~Lg~d~iDl~~lH-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~-Gkir~iGv-s~----~~~~~l~~~~~~~~ 181 (322)
..|.|.||+=.-- .|... +.+.++.++.++.+++. +. -|.| .+ ++++.++++++.+.
T Consensus 85 ~~GAdiIDIg~~StrP~~~--------------~vs~eee~~vV~~v~~~~~v--plsI~DT~~~~~~~~V~eaal~aga 148 (310)
T 2h9a_B 85 EYGADIVALRLVSAHPDGQ--------------NRSGAELAEVCKAVADAIDV--PLMIIGCGVEEKDAEIFPVIGEALS 148 (310)
T ss_dssp HTTCSEEEEECGGGCTTTT--------------CCCHHHHHHHHHHHHHHCSS--CEEEECCSCHHHHHHHHHHHHHHTT
T ss_pred HcCCcEEEEeCccCCCCCC--------------CCCHHHHHHHHHHHHHhCCc--eEEEECCCCCCCCHHHHHHHHHhCC
Confidence 7888888886531 12211 24567777788888876 33 3677 77 88999999999875
Q ss_pred C-CCceeceeeCCCCCcHHHHHHHHHcCceEEEecc
Q 041428 182 T-KPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSP 216 (322)
Q Consensus 182 ~-~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~p 216 (322)
. ++.++-+.- . +..++++.|+++|..++.+.+
T Consensus 149 ~~k~iINdvs~--~-~~~~~~~~aa~~g~~vv~m~~ 181 (310)
T 2h9a_B 149 GRNCLLSSATK--D-NYKPIVATCMVHGHSVVASAP 181 (310)
T ss_dssp TSCCEEEEECT--T-THHHHHHHHHHHTCEEEEECS
T ss_pred CCCCEEEECCC--C-ccHHHHHHHHHhCCCEEEECh
Confidence 3 455555433 2 347899999999999999775
No 82
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=50.03 E-value=1.4e+02 Score=26.58 Aligned_cols=148 Identities=14% Similarity=0.130 Sum_probs=85.9
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcC-CHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhCCC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYG-VQENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQLD 113 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg-~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~d 113 (322)
+.++..+....+.+.|++.|-.=-.-. ..+.+ +++++.+ | +++-|..... ..++.+. .+ +-+.|+.++++
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~e~v-~avr~~~--g---~~~~l~vDan-~~~~~~~-~~-~~~~l~~~~i~ 211 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEGYVRIKLKIEPGWDVEPV-RAVRERF--G---DDVLLQVDAN-TAYTLGD-AP-QLARLDPFGLL 211 (368)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECBTTBSHHHH-HHHHHHH--C---TTSEEEEECT-TCCCGGG-HH-HHHTTGGGCCS
T ss_pred CHHHHHHHHHHHHHhCccEEEEecCchhHHHHH-HHHHHhc--C---CCceEEEecc-CCCCHHH-HH-HHHHHHhcCCC
Confidence 556667777888899999876411101 23333 3555542 2 2333444432 3445555 33 33335555544
Q ss_pred ccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEe-cCCCHHHHHHHHhhcCCCCceeceeeC
Q 041428 114 YLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGV-CNFTLKKLNKLLNFAKTKPSVCQMEMH 192 (322)
Q Consensus 114 ~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~~~q~~~~ 192 (322)
++..|-+. +-++.+.+++++-.|-=.+- +-++++.++++++.... +++|+..+
T Consensus 212 -----~iE~P~~~-------------------~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~--d~v~ik~~ 265 (368)
T 1sjd_A 212 -----LIEQPLEE-------------------EDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAV--QIVNIKPG 265 (368)
T ss_dssp -----EEECCSCT-------------------TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCC--SEEEECTT
T ss_pred -----eEeCCCCh-------------------hhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCC--CEEEeccc
Confidence 45555321 23566777777655544433 34578889998877554 77888665
Q ss_pred CCCC---cHHHHHHHHHcCceEEEeccC
Q 041428 193 PGWR---NDKILEACKKNGIHVTAYSPL 217 (322)
Q Consensus 193 ~~~~---~~~ll~~~~~~gi~via~~pl 217 (322)
..-. ...+..+|+++|+.++...-+
T Consensus 266 ~~GGit~~~~i~~~A~~~g~~~~~~~~~ 293 (368)
T 1sjd_A 266 RVGGYLEARRVHDVCAAHGIPVWCGGMI 293 (368)
T ss_dssp TTTSHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred ccCCHHHHHHHHHHHHHcCCcEEeCCcc
Confidence 4322 267999999999997664444
No 83
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=49.36 E-value=1.2e+02 Score=26.33 Aligned_cols=123 Identities=17% Similarity=0.208 Sum_probs=63.9
Q ss_pred ccHHHHHHHHHHHHHcCCccEEEecC-----CC-----HHHHHHHHhhcC-C-CCceece-eeCCCCCcHHHHHHHHHcC
Q 041428 142 FDMEGVWREMEKLVKDGLVRDVGVCN-----FT-----LKKLNKLLNFAK-T-KPSVCQM-EMHPGWRNDKILEACKKNG 208 (322)
Q Consensus 142 ~~~~~~~~~L~~l~~~Gkir~iGvs~-----~~-----~~~l~~~~~~~~-~-~~~~~q~-~~~~~~~~~~ll~~~~~~g 208 (322)
.+.+++.+.++.+.+.| ++.|-++. |. ...+.++++... . ....+.+ ..++..-..++++..++.|
T Consensus 33 r~~e~i~~ei~~l~~~G-~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~~gi~~ir~~~~~p~~l~~e~l~~l~~~g 111 (304)
T 2qgq_A 33 RSIEDITREVEDLLKEG-KKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVMYLHPDHLTEEIISAMLELD 111 (304)
T ss_dssp CCHHHHHHHHHHHHHTT-CCEEEEECTTGGGTTHHHHSSCCHHHHHHHHHTSSSSCEEEECCCCGGGCCHHHHHHHHHCT
T ss_pred eCHHHHHHHHHHHHHCC-CcEEEEEeEcccccCCCCCcHHHHHHHHHHHHhcCCCcEEEEeeeecccCCHHHHHHHHhCC
Confidence 56789999999999987 45554432 21 123444444321 1 1111211 1233333478999999988
Q ss_pred --ceEEEeccCCCCCCCCCCCCCHHHHHHHHhcCCCHHHHHHHHhhh--cC----CEEecCC--CCHHHHHHhHh
Q 041428 209 --IHVTAYSPLGSQGAGRDLIHDPTVERIAKKLNKSPGQILLKWGIH--RG----TSVIPKS--THPDRIKENIK 273 (322)
Q Consensus 209 --i~via~~pl~~~G~l~~~~~~~~l~~la~~~~~s~~qlal~~~l~--~~----~~~i~g~--~~~~~l~~nl~ 273 (322)
+..+..+.= + | ..+.++.+.+.+...-..-+++.+.. .+ ..+|+|. .+.+++.+.++
T Consensus 112 ~~~~~l~i~lq-s-~------s~~vl~~m~r~~t~e~~~~~i~~l~~~~~gi~i~~~~IvG~PgEt~ed~~~t~~ 178 (304)
T 2qgq_A 112 KVVKYFDVPVQ-H-G------SDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQ 178 (304)
T ss_dssp TBCCEEECCCB-C-S------CHHHHHHTTCCSCHHHHHHHHHHHHHHCTTCEEEEEEEECCTTCCHHHHHHHHH
T ss_pred CCccEEEEecc-c-C------CHHHHHHhCCCCCHHHHHHHHHHHHhhCCCCEEEEEEEEeCCCCCHHHHHHHHH
Confidence 555554332 2 2 34555554333222122234555555 33 2456765 57777766654
No 84
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=48.89 E-value=13 Score=24.14 Aligned_cols=21 Identities=24% Similarity=0.363 Sum_probs=18.5
Q ss_pred ccHHHHHHHHHHHHHcCCccE
Q 041428 142 FDMEGVWREMEKLVKDGLVRD 162 (322)
Q Consensus 142 ~~~~~~~~~L~~l~~~Gkir~ 162 (322)
.+.+++++.|.+|.++|+|+-
T Consensus 37 V~kdeV~~~LrrLe~KGLI~l 57 (59)
T 2xvc_A 37 VEKQEVVKLLEALKNKGLIAV 57 (59)
T ss_dssp CCHHHHHHHHHHHHHTTSEEE
T ss_pred CCHHHHHHHHHHHHHCCCeec
Confidence 457899999999999999973
No 85
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=48.54 E-value=75 Score=29.19 Aligned_cols=149 Identities=18% Similarity=0.161 Sum_probs=88.7
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCCCcCC-------HH--HHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHH
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAKQYGV-------QE--NIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALN 104 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~-------e~--~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~ 104 (322)
.+.++..+..+.+++.|++.|..=-.+|. +. ..=+++|+.+ .+++-|..... ..++.+...+ +-
T Consensus 178 ~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReav-----G~d~~L~vDaN-~~~~~~~Ai~-~~ 250 (412)
T 3stp_A 178 GSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVI-----GYDNDLMLECY-MGWNLDYAKR-ML 250 (412)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHH-----CSSSEEEEECT-TCSCHHHHHH-HH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHc-----CCCCeEEEECC-CCCCHHHHHH-HH
Confidence 35677778888899999999886433321 11 1223445432 24455555653 2345444332 22
Q ss_pred HHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEE-EecCCCHHHHHHHHhhcCCC
Q 041428 105 NTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDV-GVCNFTLKKLNKLLNFAKTK 183 (322)
Q Consensus 105 ~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~i-Gvs~~~~~~l~~~~~~~~~~ 183 (322)
+.|+.++ +.++..|-+. +-++.+.++++.-.|--. |=+-++.+.+.++++....
T Consensus 251 ~~Le~~~-----i~~iEeP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~- 305 (412)
T 3stp_A 251 PKLAPYE-----PRWLEEPVIA-------------------DDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKAV- 305 (412)
T ss_dssp HHHGGGC-----CSEEECCSCT-------------------TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCC-
T ss_pred HHHHhcC-----CCEEECCCCc-------------------ccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCC-
Confidence 3445554 4455555331 235667888887666433 3345678899999887554
Q ss_pred CceeceeeCCCC---CcHHHHHHHHHcCceEEEec
Q 041428 184 PSVCQMEMHPGW---RNDKILEACKKNGIHVTAYS 215 (322)
Q Consensus 184 ~~~~q~~~~~~~---~~~~ll~~~~~~gi~via~~ 215 (322)
+++|+...-.- ....+..+|+++|+.++..+
T Consensus 306 -D~v~ik~~~~GGit~a~kia~~A~a~gi~v~~h~ 339 (412)
T 3stp_A 306 -SVLQYDTNRVGGITAAQKINAIAEAAQIPVIPHA 339 (412)
T ss_dssp -SEECCCHHHHTHHHHHHHHHHHHHHHTCCBCCSS
T ss_pred -CEEecChhhcCCHHHHHHHHHHHHHcCCEEEecc
Confidence 77777654322 22678999999999987655
No 86
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=48.46 E-value=1.4e+02 Score=26.29 Aligned_cols=132 Identities=14% Similarity=0.092 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHcCCCeEec--C-----------------CCcC-C----HHHHHHHHHHHHhcCCCCCcEEEEecCCCC-
Q 041428 38 AFKSVFTAIVEGGYRHIDT--A-----------------KQYG-V----QENIGLALKEAMQTGIQRKDLFVTSKLWCA- 92 (322)
Q Consensus 38 ~~~~~l~~Al~~Gi~~~DT--A-----------------~~Yg-~----e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~- 92 (322)
+..+.-+.|.++|+..++. + +.|| + -+.+-+.++.. .+.+ ++-|..|+...
T Consensus 145 ~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~av-r~~v---~~pv~vris~~~ 220 (338)
T 1z41_A 145 EFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEV-KQVW---DGPLFVRVSASD 220 (338)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHH-HHHC---CSCEEEEEECCC
T ss_pred HHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHH-HHHc---CCcEEEEecCcc
Confidence 3445556778899998872 3 2365 2 12223333322 1112 45577777432
Q ss_pred ----CCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCC
Q 041428 93 ----DLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNF 168 (322)
Q Consensus 93 ----~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~ 168 (322)
..+.+. ...+-+.|+..|.++|++ |......... + ......++.+.++++.=.+--++...+
T Consensus 221 ~~~~g~~~~~-~~~~a~~l~~~Gvd~i~v---~~~~~~~~~~--~--------~~~~~~~~~~~~ir~~~~iPVi~~Ggi 286 (338)
T 1z41_A 221 YTDKGLDIAD-HIGFAKWMKEQGVDLIDC---SSGALVHADI--N--------VFPGYQVSFAEKIREQADMATGAVGMI 286 (338)
T ss_dssp CSTTSCCHHH-HHHHHHHHHHTTCCEEEE---ECCCSSCCCC--C--------CCTTTTHHHHHHHHHHHCCEEEECSSC
T ss_pred cCCCCCCHHH-HHHHHHHHHHcCCCEEEE---ecCccccCCC--C--------CCccchHHHHHHHHHHCCCCEEEECCC
Confidence 233333 334556677788666655 4432110000 0 000012344455555446677888887
Q ss_pred -CHHHHHHHHhhcCCCCceece
Q 041428 169 -TLKKLNKLLNFAKTKPSVCQM 189 (322)
Q Consensus 169 -~~~~l~~~~~~~~~~~~~~q~ 189 (322)
+++..+++++.+.. +.+++
T Consensus 287 ~s~~~a~~~l~~G~a--D~V~i 306 (338)
T 1z41_A 287 TDGSMAEEILQNGRA--DLIFI 306 (338)
T ss_dssp CSHHHHHHHHHTTSC--SEEEE
T ss_pred CCHHHHHHHHHcCCc--eEEee
Confidence 78999999987654 55554
No 87
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=46.43 E-value=21 Score=31.92 Aligned_cols=107 Identities=10% Similarity=0.155 Sum_probs=71.4
Q ss_pred CCccEEEecCCCHHHHHHHHhhcCCCCceecee-eCCCC-----CcHHHHHHHHHcCceEEEeccCCCCCCCCCCCCCHH
Q 041428 158 GLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQME-MHPGW-----RNDKILEACKKNGIHVTAYSPLGSQGAGRDLIHDPT 231 (322)
Q Consensus 158 Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~-~~~~~-----~~~~ll~~~~~~gi~via~~pl~~~G~l~~~~~~~~ 231 (322)
.++-.+-=++.+.+...++.+...-++.-+..+ ++-.+ ++..+.+++++.++-++.-++-.+ +..+
T Consensus 171 ~kv~~vsQTT~s~~~~~~iv~~L~~r~p~i~~~~~ntIC~AT~~RQ~av~~lA~~vD~miVVGg~nSS--------NT~r 242 (328)
T 3szu_A 171 EKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSS--------NSNR 242 (328)
T ss_dssp TSEEEEECTTSCHHHHHHHHHHHHHHCTTCBCCSSCSCCHHHHHHHHHHHHHHHHCSEEEEECCTTCH--------HHHH
T ss_pred CeEEEEEecCCcHHHHHHHHHHHHHhCcccccCCCCCcCHHHHHHHHHHHHHHHhCCEEEEeCCCCCc--------hHHH
Confidence 567677777778777766665533111111211 22222 347788999998888877444332 3478
Q ss_pred HHHHHHhcCC------CHHHHHHHHhhhcC-CEEecCCCCHHHHHHhH
Q 041428 232 VERIAKKLNK------SPGQILLKWGIHRG-TSVIPKSTHPDRIKENI 272 (322)
Q Consensus 232 l~~la~~~~~------s~~qlal~~~l~~~-~~~i~g~~~~~~l~~nl 272 (322)
|.++|++.|. +..++-..|+-... +.+..|+|+|+.+.+.+
T Consensus 243 L~eia~~~g~~ty~Ie~~~el~~~wl~g~~~VGITAGASTP~~lieeV 290 (328)
T 3szu_A 243 LAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNV 290 (328)
T ss_dssp HHHHHHHTTCEEEEESSGGGCCHHHHTTCSEEEEEECTTCCHHHHHHH
T ss_pred HHHHHHHhCCCEEEeCChHHCCHHHhCCCCEEEEeecCCCCHHHHHHH
Confidence 9999999884 67888889986555 77889999999876554
No 88
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=46.37 E-value=1.4e+02 Score=27.08 Aligned_cols=148 Identities=15% Similarity=0.089 Sum_probs=84.8
Q ss_pred hhHHHHHHHHHHHcCCCeEecCCCcCCH--HHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhCCC
Q 041428 36 DEAFKSVFTAIVEGGYRHIDTAKQYGVQ--ENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQLD 113 (322)
Q Consensus 36 ~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e--~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~d 113 (322)
.++..+..+.+++.|++.|-.=-..+.+ ...=+++|+.+ .+++-|..... ..++.+...+ +-+.|+.++
T Consensus 156 ~e~~~~~a~~~~~~G~~~iKlK~g~~~~~d~~~v~avR~a~-----g~~~~l~vDaN-~~~~~~~A~~-~~~~L~~~~-- 226 (392)
T 3ddm_A 156 PENPEDVVARKAAEGYRAFKLKVGFDDARDVRNALHVRELL-----GAATPLMADAN-QGWDLPRARQ-MAQRLGPAQ-- 226 (392)
T ss_dssp SSSHHHHHHHHHHHTCCCEEEECSSCHHHHHHHHHHHHHHH-----CSSSCEEEECT-TCCCHHHHHH-HHHHHGGGC--
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCHHHHHHHHHHHHHhc-----CCCceEEEeCC-CCCCHHHHHH-HHHHHHHhC--
Confidence 4667778888899999998753222211 12234555542 23333444442 2344443322 233445544
Q ss_pred ccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccE-EEecCCCHHHHHHHHhhcCCCCceeceeeC
Q 041428 114 YLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRD-VGVCNFTLKKLNKLLNFAKTKPSVCQMEMH 192 (322)
Q Consensus 114 ~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~-iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~ 192 (322)
+.++..|-+. ...++.+.++++.-.|-- .|=+-++...+.++++.... +++|+...
T Consensus 227 ---i~~iEeP~~~------------------~d~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~--d~v~~k~~ 283 (392)
T 3ddm_A 227 ---LDWLEEPLRA------------------DRPAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSL--RVMQPDLA 283 (392)
T ss_dssp ---CSEEECCSCT------------------TSCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCE--EEECCCTT
T ss_pred ---CCEEECCCCc------------------cchHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCC--CEEEeCcc
Confidence 4445555331 011566777877655543 34455678899998876543 77777654
Q ss_pred CCC---CcHHHHHHHHHcCceEEEec
Q 041428 193 PGW---RNDKILEACKKNGIHVTAYS 215 (322)
Q Consensus 193 ~~~---~~~~ll~~~~~~gi~via~~ 215 (322)
-.- ....+..+|+++|+.++.+.
T Consensus 284 ~~GGit~~~~ia~~A~~~gi~~~~h~ 309 (392)
T 3ddm_A 284 KWGGFSGCLPVARAVVAAGLRYCPHY 309 (392)
T ss_dssp TTTHHHHHHHHHHHHHHTTCEECCEE
T ss_pred hhCCHHHHHHHHHHHHHcCCEEEecC
Confidence 432 22679999999999996554
No 89
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=46.13 E-value=77 Score=27.42 Aligned_cols=99 Identities=12% Similarity=0.104 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHH
Q 041428 97 DRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFTLKKLNKL 176 (322)
Q Consensus 97 ~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~ 176 (322)
..-+.++-+.|..+|+++|.+-..-.+... ....+.++.+..+.+...++...+. -+...++++
T Consensus 25 ~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~---------------p~~~~~~e~~~~i~~~~~~~v~~l~-~n~~~i~~a 88 (295)
T 1ydn_A 25 TADKIALINRLSDCGYARIEATSFVSPKWV---------------PQLADSREVMAGIRRADGVRYSVLV-PNMKGYEAA 88 (295)
T ss_dssp HHHHHHHHHHHTTTTCSEEEEEECSCTTTC---------------GGGTTHHHHHHHSCCCSSSEEEEEC-SSHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcCEEEEccCcCcccc---------------ccccCHHHHHHHHHhCCCCEEEEEe-CCHHHHHHH
Confidence 345566677788899888887643222211 0112556667777665566666665 567777777
Q ss_pred HhhcCCCCceeceeeCC---------CCC-c------HHHHHHHHHcCceEEEe
Q 041428 177 LNFAKTKPSVCQMEMHP---------GWR-N------DKILEACKKNGIHVTAY 214 (322)
Q Consensus 177 ~~~~~~~~~~~q~~~~~---------~~~-~------~~ll~~~~~~gi~via~ 214 (322)
.+.+ + ..+++.... ... + .+.+++|+++|+.|.++
T Consensus 89 ~~~G-~--~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~ 139 (295)
T 1ydn_A 89 AAAH-A--DEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGY 139 (295)
T ss_dssp HHTT-C--SEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHCC-C--CEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 7753 3 344444211 111 1 56789999999999754
No 90
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=46.03 E-value=1.8e+02 Score=26.81 Aligned_cols=148 Identities=13% Similarity=0.085 Sum_probs=86.0
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCCCcCCHHH--HHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhC
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAKQYGVQEN--IGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQ 111 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~--lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg 111 (322)
.+.++..+..+.+++.|++.|-.=-.-..+.- .=+++++.+ .+++-|..... ..++++... +.+++|.
T Consensus 200 ~~~e~~~~~a~~~~~~Gf~~~KlKvG~~~~~d~~~v~avR~a~-----G~~~~l~vDaN-~~~~~~~A~----~~~~~L~ 269 (441)
T 4a35_A 200 YSDDTLKQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDMI-----GPEKTLMMDAN-QRWDVPEAV----EWMSKLA 269 (441)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHH-----CTTSEEEEECT-TCCCHHHHH----HHHHHHG
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCCCHHHHHHHHHHHHHHh-----CCCCeEEEECC-CCCCHHHHH----HHHHhhc
Confidence 46777888888899999998864221111111 223455542 23444555542 234443322 2333442
Q ss_pred CCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHc----CCccEEEecCCCHHHHHHHHhhcCCCCcee
Q 041428 112 LDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKD----GLVRDVGVCNFTLKKLNKLLNFAKTKPSVC 187 (322)
Q Consensus 112 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~----Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~ 187 (322)
..+++++..|-+. +-++.+.+|++. +.=-+.|=+.++...+..+++...+ +++
T Consensus 270 --~~~~~~iEeP~~~-------------------~d~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~--div 326 (441)
T 4a35_A 270 --KFKPLWIEEPTSP-------------------DDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKAL--QFL 326 (441)
T ss_dssp --GGCCSEEECCSCT-------------------TCHHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCC--SEE
T ss_pred --ccCccEEeCCCCc-------------------ccHHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCC--CEE
Confidence 3467777776442 113345555542 3333556667788889888876554 778
Q ss_pred ceeeCCCCC---cHHHHHHHHHcCceEEEe
Q 041428 188 QMEMHPGWR---NDKILEACKKNGIHVTAY 214 (322)
Q Consensus 188 q~~~~~~~~---~~~ll~~~~~~gi~via~ 214 (322)
|+...-.-. ...+..+|+++|+.+..+
T Consensus 327 ~~d~~~~GGit~~~kia~lA~~~gv~v~~H 356 (441)
T 4a35_A 327 QIDSCRLGSVNENLSVLLMAKKFEIPVCPH 356 (441)
T ss_dssp CCCTTTSSHHHHHHHHHHHHHHTTCCBCCC
T ss_pred EECccccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 887654432 267999999999998654
No 91
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=45.74 E-value=1.7e+02 Score=26.35 Aligned_cols=153 Identities=13% Similarity=0.134 Sum_probs=90.3
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcCC--HHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhCC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYGV--QENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQL 112 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~--e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~ 112 (322)
+.++..+.++.+++.|++.|-.=-.... +...=+++++. -.+++-|..... ..++.+... +-++.|.-
T Consensus 142 ~~e~~~~~a~~~~~~Gf~~~KlK~g~~~~~d~~~v~avR~a-----~g~~~~L~vDaN-~~w~~~~A~----~~~~~l~~ 211 (379)
T 3r0u_A 142 NVAETIQNIQNGVEANFTAIKVKTGADFNRDIQLLKALDNE-----FSKNIKFRFDAN-QGWNLAQTK----QFIEEINK 211 (379)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHH-----CCTTSEEEEECT-TCCCHHHHH----HHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEeeecCCCHHHHHHHHHHHHHh-----cCCCCeEEEeCC-CCcCHHHHH----HHHHHHhh
Confidence 4566777788888999998875322221 22223455554 223444544442 234443322 23334431
Q ss_pred Cc-cceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHhhcCCCCceecee
Q 041428 113 DY-LDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVR-DVGVCNFTLKKLNKLLNFAKTKPSVCQME 190 (322)
Q Consensus 113 d~-iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~ 190 (322)
+ .++.++..|-+. +-++.+.++++.-.+- ..|=+-++...+.++++.... +++|+.
T Consensus 212 -~~~~l~~iEeP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~--d~v~~k 269 (379)
T 3r0u_A 212 -YSLNVEIIEQPVKY-------------------YDIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQAC--NMINIK 269 (379)
T ss_dssp -SCCCEEEEECCSCT-------------------TCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCC--SEEEEC
T ss_pred -cCCCcEEEECCCCc-------------------ccHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCC--CEEEEC
Confidence 2 567777766432 1245567777654443 445566788889988886544 777776
Q ss_pred eCCCC---CcHHHHHHHHHcCceEEEeccCCC
Q 041428 191 MHPGW---RNDKILEACKKNGIHVTAYSPLGS 219 (322)
Q Consensus 191 ~~~~~---~~~~ll~~~~~~gi~via~~pl~~ 219 (322)
....- ....+..+|+++|+.++..+.+.+
T Consensus 270 ~~~~GGi~~~~~ia~~A~~~gi~~~~~~~~es 301 (379)
T 3r0u_A 270 LAKTGGILEAQKIKKLADSAGISCMVGCMMES 301 (379)
T ss_dssp HHHHTSHHHHHHHHHHHHHTTCEEEECCCSCC
T ss_pred ccccCCHHHHHHHHHHHHHcCCEEEEeCCCcc
Confidence 54322 226799999999999998776643
No 92
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=45.73 E-value=1.7e+02 Score=26.28 Aligned_cols=40 Identities=8% Similarity=-0.075 Sum_probs=29.0
Q ss_pred HHHHHHHHcCCccEEEecCCCHHHHHHHHhhcCCCCceecee
Q 041428 149 REMEKLVKDGLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQME 190 (322)
Q Consensus 149 ~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~ 190 (322)
+.+.++++.=.+--|++..++++..+++++.+.. +.+++-
T Consensus 283 ~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~a--D~V~ig 322 (365)
T 2gou_A 283 SFKRALREAYQGVLIYAGRYNAEKAEQAINDGLA--DMIGFG 322 (365)
T ss_dssp HHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSC--SEEECC
T ss_pred HHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCCCc--ceehhc
Confidence 3455666665677889999999999999987654 566553
No 93
>1vpq_A Hypothetical protein TM1631; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.1.32.1
Probab=45.71 E-value=71 Score=27.60 Aligned_cols=78 Identities=17% Similarity=0.256 Sum_probs=49.4
Q ss_pred HHHHHHHH-cCCCeEec-CCCcC--CHHHHHHHHHHHHhcCCCCCcEEEEecCCC---CC-----CChHHHHHHHHHHHH
Q 041428 41 SVFTAIVE-GGYRHIDT-AKQYG--VQENIGLALKEAMQTGIQRKDLFVTSKLWC---AD-----LSPDRVRSALNNTLQ 108 (322)
Q Consensus 41 ~~l~~Al~-~Gi~~~DT-A~~Yg--~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~---~~-----~~~~~i~~~~~~SL~ 108 (322)
+-|....+ -..+.+.. +..|+ +++.+-++.++ ..+++..+.|+.. +. ...+...+.+-++++
T Consensus 39 ~~L~~Ya~~~~F~tVEiNsTFY~~p~~~t~~~W~~~------tP~~F~F~vKa~r~iTh~~~~~~~~~~~~~~~F~~~~~ 112 (273)
T 1vpq_A 39 QFLKYYWAVLGFRIVELNFTYYTQPSWRSFVQMLRK------TPPDFYFTVKTPGSVTHVLWKEGKDPKEDMENFTRQIE 112 (273)
T ss_dssp GHHHHHHHTSCCCEEEECCCSSSSSCHHHHHHHHTT------SCTTCEEEEECCHHHHHTHHHHTCCSHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCeEEECccccCCCCHHHHHHHHHh------CCCCeEEEEEeChhhcccccccccchHHHHHHHHHHHH
Confidence 34444433 15666665 55687 78888888775 3789999999842 11 111333445556777
Q ss_pred Hh--CCCccceeEeecCCC
Q 041428 109 EL--QLDYLDLYLIHWPFR 125 (322)
Q Consensus 109 ~L--g~d~iDl~~lH~p~~ 125 (322)
-| | +++..+++.-|..
T Consensus 113 pL~~~-~kLG~vL~Q~Pps 130 (273)
T 1vpq_A 113 PLIEE-QRLKMTLAQFPFS 130 (273)
T ss_dssp HHHHT-TCEEEEEEECCTT
T ss_pred hhccC-CCEEEEEEEcCCC
Confidence 77 6 7888888888754
No 94
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=45.58 E-value=1.3e+02 Score=26.83 Aligned_cols=151 Identities=14% Similarity=0.045 Sum_probs=87.3
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcC--CHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhCC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYG--VQENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQL 112 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg--~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~ 112 (322)
+.++..+..+.+++.|++.|..=-.-. .+...=+++++.+ .+++-|..... ..++.+... .+-+.|+.+++
T Consensus 140 ~~~~~~~~a~~~~~~G~~~~K~K~G~~~~~d~~~v~avR~~~-----g~~~~l~vDan-~~~~~~~a~-~~~~~l~~~~i 212 (356)
T 3ro6_B 140 PVEETLAEAREHLALGFRVLKVKLCGDEEQDFERLRRLHETL-----AGRAVVRVDPN-QSYDRDGLL-RLDRLVQELGI 212 (356)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHHHH-----TTSSEEEEECT-TCCCHHHHH-HHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHHh-----CCCCEEEEeCC-CCCCHHHHH-HHHHHHHhcCC
Confidence 456677777888899999987532211 1222234555542 23455555552 234544433 23355666665
Q ss_pred CccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHhhc-CCCCceecee
Q 041428 113 DYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVR-DVGVCNFTLKKLNKLLNFA-KTKPSVCQME 190 (322)
Q Consensus 113 d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~-~~~~~~~q~~ 190 (322)
++| ..|-+. +-++.+.+++++-.|- ..|=+-++...+.++++.. . .+++|+.
T Consensus 213 ~~i-----EqP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~--~d~v~~k 266 (356)
T 3ro6_B 213 EFI-----EQPFPA-------------------GRTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAA--CGIFNIK 266 (356)
T ss_dssp CCE-----ECCSCT-------------------TCHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCS--CSEEEEC
T ss_pred CEE-----ECCCCC-------------------CcHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCc--CCEEEEc
Confidence 544 344321 1245566665543343 2344556788888888764 3 3777776
Q ss_pred eCCCC---CcHHHHHHHHHcCceEEEeccCC
Q 041428 191 MHPGW---RNDKILEACKKNGIHVTAYSPLG 218 (322)
Q Consensus 191 ~~~~~---~~~~ll~~~~~~gi~via~~pl~ 218 (322)
.+..- ....+..+|+++|+.++..+.+.
T Consensus 267 ~~~~GGit~~~~i~~~a~~~gi~~~~~~~~e 297 (356)
T 3ro6_B 267 LMKCGGLAPARRIATIAETAGIDLMWGCMDE 297 (356)
T ss_dssp HHHHCSHHHHHHHHHHHHHHTCEEEECCCSC
T ss_pred ccccCCHHHHHHHHHHHHHcCCEEEecCCcc
Confidence 54322 22679999999999999876654
No 95
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=45.35 E-value=93 Score=26.55 Aligned_cols=183 Identities=13% Similarity=0.053 Sum_probs=98.4
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCCCcC------CHHHHHHHH---HHHHhcCCCCCcEE--EEecCCCCCCChHHHHHH
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAKQYG------VQENIGLAL---KEAMQTGIQRKDLF--VTSKLWCADLSPDRVRSA 102 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg------~e~~lG~~l---~~~~~~~~~R~~~~--i~tK~~~~~~~~~~i~~~ 102 (322)
.+.+++.+++++|.+.|++.|=.++++- +.+.+-+.+ ++..+. ...++. ...-+ +..++ +...
T Consensus 17 ~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~--~~~~i~I~~G~Ev---~~~~~-~~~~ 90 (262)
T 3qy7_A 17 GDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIK--EDIPLHVLPGQEI---RIYGE-VEQD 90 (262)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHH--TTCCCEEECCCEE---ECCTT-HHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHh--cCCCCEEecCeEE---ecchh-HHHH
Confidence 3457778899999999999999888873 222333332 222110 011222 22222 23332 2233
Q ss_pred HHH-HHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecC------CCHHHHHH
Q 041428 103 LNN-TLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCN------FTLKKLNK 175 (322)
Q Consensus 103 ~~~-SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~------~~~~~l~~ 175 (322)
+++ ++-.|+ --|.+++..|... ....+.+.+..+.+.|.+--||=-. ...+.+.+
T Consensus 91 l~~~~~~~l~--~~~~vl~e~~~~~----------------~~~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~~ 152 (262)
T 3qy7_A 91 LAKRQLLSLN--DTKYILIEFPFDH----------------VPRYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYH 152 (262)
T ss_dssp HHTTCSCCGG--GSSEEEEECCTTC----------------CCTTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHHH
T ss_pred HhcCCCcEEC--CceEEEEeCCCcc----------------CHHHHHHHHHHHHHCCCcEEEECCCccccccccHHHHHH
Confidence 333 232332 1245666554321 1246777888999999876666321 12345566
Q ss_pred HHhhcCCCCceeceeeCCCCC-----cHHHHHHHHHcCceEEEeccCCCCCCCCCCCC-CHHHHHHHHhcCCCHHHH
Q 041428 176 LLNFAKTKPSVCQMEMHPGWR-----NDKILEACKKNGIHVTAYSPLGSQGAGRDLIH-DPTVERIAKKLNKSPGQI 246 (322)
Q Consensus 176 ~~~~~~~~~~~~q~~~~~~~~-----~~~ll~~~~~~gi~via~~pl~~~G~l~~~~~-~~~l~~la~~~~~s~~ql 246 (322)
+.+.+ ..+|++.+.+.. .......+.+.|+.++.-|-..+.. ..... .+.+..+.+++|...+..
T Consensus 153 l~~~G----~~iEiN~~s~~g~~g~~~~~~~~~~~~~gl~~~igSDaH~~~--~r~~~~~~a~~~l~~~~G~~~a~~ 223 (262)
T 3qy7_A 153 LVEKG----AASQITSGSLAGIFGKQLKAFSLRLVEANLIHFVASDAHNVK--TRNFHTQEALYVLEKEFGSELPYM 223 (262)
T ss_dssp HHHTT----CEEEEEHHHHHTTTCHHHHHHHHHHHHTTCCCEEECCBCSSS--SSCCCHHHHHHHHHHHHCSHHHHH
T ss_pred HHHCC----CEEEEECCccCcccchHHHHHHHHHHhCCCeEEEEccCCCCC--CCCchHHHHHHHHHHHhCHHHHHH
Confidence 65543 356776554432 1457778888999888766665411 01111 234455555688766554
No 96
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=44.99 E-value=55 Score=30.93 Aligned_cols=84 Identities=14% Similarity=0.206 Sum_probs=62.8
Q ss_pred CCCCcEEEEecCCCC------------------CCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCcc
Q 041428 78 IQRKDLFVTSKLWCA------------------DLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEV 139 (322)
Q Consensus 78 ~~R~~~~i~tK~~~~------------------~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~ 139 (322)
-.+-++|+++-++.. +.++. +.-+|+.+.|+|-+.
T Consensus 159 ~L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~Evd~~-------ri~~R~~~gyld~~~-------------------- 211 (551)
T 1x87_A 159 TLAGTITLTAGLGGMGGAQPLAVTMNGGVCLAIEVDPA-------RIQRRIDTNYLDTMT-------------------- 211 (551)
T ss_dssp CCTTCEEEEECCSTTGGGHHHHHHHTTCEEEEEESCHH-------HHHHHHHTTSCSEEE--------------------
T ss_pred CCCceEEEEecCCccchhhHHHHHHcCceEEEEEECHH-------HHHHHHhCCCceeEc--------------------
Confidence 356678888887431 22333 344678889999863
Q ss_pred ccccHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHhhcCCCCce--eceee
Q 041428 140 LEFDMEGVWREMEKLVKDGLVRDVGVCNFTLKKLNKLLNFAKTKPSV--CQMEM 191 (322)
Q Consensus 140 ~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~--~q~~~ 191 (322)
.+.+++++...+.+++|+...||+-.--++.++++++.. +.|++ -|...
T Consensus 212 --~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~-i~~DlvtDQTSa 262 (551)
T 1x87_A 212 --DSLDAALEMAKQAKEEKKALSIGLVGNAAEVLPRLVETG-FVPDVLTDQTSA 262 (551)
T ss_dssp --SCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTT-CCCSEECCCSCT
T ss_pred --CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCC-CCCCCCCCCccc
Confidence 357899999999999999999999999899999999874 55554 35544
No 97
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=44.38 E-value=1.8e+02 Score=26.30 Aligned_cols=149 Identities=10% Similarity=0.041 Sum_probs=88.4
Q ss_pred CChhHHHHHH-HHHHHcCCCeEecCCCc-------CCH--HHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHH
Q 041428 34 SGDEAFKSVF-TAIVEGGYRHIDTAKQY-------GVQ--ENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSAL 103 (322)
Q Consensus 34 ~~~~~~~~~l-~~Al~~Gi~~~DTA~~Y-------g~e--~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~ 103 (322)
.+.++..+.+ +.+++.|++.|-.=-.. ..+ ...=+++|+.+ .+++-|..... ..++.+...+ +
T Consensus 138 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~-----g~~~~l~vDaN-~~~~~~~A~~-~ 210 (393)
T 4dwd_A 138 RSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELL-----GPDAVIGFDAN-NGYSVGGAIR-V 210 (393)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHH-----CTTCCEEEECT-TCCCHHHHHH-H
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHh-----CCCCeEEEECC-CCCCHHHHHH-H
Confidence 4566777777 88899999998752211 111 12234555542 23444444542 2345444332 3
Q ss_pred HHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEE-EecCCCHHHHHHHHhhcCC
Q 041428 104 NNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDV-GVCNFTLKKLNKLLNFAKT 182 (322)
Q Consensus 104 ~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~i-Gvs~~~~~~l~~~~~~~~~ 182 (322)
-+.|+.++++ ++..|-+. +-++.+.++++.-.|--. |=+-++...+.++++.. .
T Consensus 211 ~~~L~~~~i~-----~iEqP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~ 265 (393)
T 4dwd_A 211 GRALEDLGYS-----WFEEPVQH-------------------YHVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG-V 265 (393)
T ss_dssp HHHHHHTTCS-----EEECCSCT-------------------TCHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT-C
T ss_pred HHHHHhhCCC-----EEECCCCc-------------------ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-C
Confidence 3456666644 44444321 125667777776555322 33456788898888875 4
Q ss_pred CCceeceeeCCCCC---cHHHHHHHHHcCceEEEecc
Q 041428 183 KPSVCQMEMHPGWR---NDKILEACKKNGIHVTAYSP 216 (322)
Q Consensus 183 ~~~~~q~~~~~~~~---~~~ll~~~~~~gi~via~~p 216 (322)
+++|+.....-. ...+..+|+++|+.++.++.
T Consensus 266 --d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 266 --RMVQPDIVKMGGITGMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp --CEECCCTTTTTHHHHHHHHHHHHHHHTCEECCCCC
T ss_pred --CEEEeCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 888887655432 26799999999999988776
No 98
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=43.99 E-value=55 Score=30.96 Aligned_cols=126 Identities=17% Similarity=0.181 Sum_probs=81.3
Q ss_pred HHHHHHHHcCCCeEe--cCCCc---CC-------HHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHH---------
Q 041428 41 SVFTAIVEGGYRHID--TAKQY---GV-------QENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRV--------- 99 (322)
Q Consensus 41 ~~l~~Al~~Gi~~~D--TA~~Y---g~-------e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i--------- 99 (322)
+-.+..-..|+..+= ||.+| |+ -+.+..+-++.+. +-.+-++|+++-++.... ....
T Consensus 116 e~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~g-g~L~G~~~lTaGLGGMgG-AQplA~~mag~v~ 193 (557)
T 1uwk_A 116 EHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYG-GSLKGKWVLTAGLGGMGG-AQPLAATLAGACS 193 (557)
T ss_dssp HHHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHTS-SCCTTCEEEEECCSTTTT-HHHHHHHHTTCEE
T ss_pred HHHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcC-CCCCceEEEEecCCccch-hhHHHHHHcCceE
Confidence 445666778886553 66665 23 3333444444322 235678899888753211 0000
Q ss_pred ---HHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHH
Q 041428 100 ---RSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFTLKKLNKL 176 (322)
Q Consensus 100 ---~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~ 176 (322)
.-.-.+.-+|+.+.|+|-+. .+.+++++...+.+++|+...||+-.--++.++++
T Consensus 194 i~~Evd~~ri~~R~~~gyld~~~----------------------~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l 251 (557)
T 1uwk_A 194 LNIESQQSRIDFRLETRYVDEQA----------------------TDLDDALVRIAKYTAEGKAISIALHGNAAEILPEL 251 (557)
T ss_dssp EEEESCHHHHHHHHHTTSCCEEC----------------------SSHHHHHHHHHHHHHTTCCCEEEEESCHHHHHHHH
T ss_pred EEEEECHHHHHHHHhCCCceeEc----------------------CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHH
Confidence 00123344678889999863 35789999999999999999999999989999999
Q ss_pred HhhcCCCCce--eceee
Q 041428 177 LNFAKTKPSV--CQMEM 191 (322)
Q Consensus 177 ~~~~~~~~~~--~q~~~ 191 (322)
++.. +.|++ -|...
T Consensus 252 ~~~~-i~~DlvtDQTSa 267 (557)
T 1uwk_A 252 VKRG-VRPDMVTDQTSA 267 (557)
T ss_dssp HHHT-CCCSEECCCSCT
T ss_pred HHCC-CCCCCCCCCccc
Confidence 9874 44554 35544
No 99
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=43.55 E-value=1.8e+02 Score=26.01 Aligned_cols=38 Identities=11% Similarity=0.138 Sum_probs=23.8
Q ss_pred HHHHHHHcCCccEEEecCC-CHHHHHHHHhhcCCCCceece
Q 041428 150 EMEKLVKDGLVRDVGVCNF-TLKKLNKLLNFAKTKPSVCQM 189 (322)
Q Consensus 150 ~L~~l~~~Gkir~iGvs~~-~~~~l~~~~~~~~~~~~~~q~ 189 (322)
.+..+++.-.+--|++..+ +++..+++++.+.. +.+++
T Consensus 286 ~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~a--D~V~i 324 (363)
T 3l5l_A 286 IAERVRREAKLPVTSAWGFGTPQLAEAALQANQL--DLVSV 324 (363)
T ss_dssp HHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSC--SEEEC
T ss_pred HHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCc--cEEEe
Confidence 3444444435667787776 58888888887643 44444
No 100
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=43.21 E-value=92 Score=28.20 Aligned_cols=37 Identities=8% Similarity=-0.034 Sum_probs=25.7
Q ss_pred HHHHHHcCCccEEEecCCCHHHHHHHHhhcCCCCceece
Q 041428 151 MEKLVKDGLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQM 189 (322)
Q Consensus 151 L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~ 189 (322)
+.++++.=.+--|+...++++..+++++.+.. +++++
T Consensus 293 ~~~vr~~~~iPvi~~G~i~~~~a~~~l~~g~a--D~V~~ 329 (376)
T 1icp_A 293 LVPMRKAYKGTFIVAGGYDREDGNRALIEDRA--DLVAY 329 (376)
T ss_dssp SHHHHHHCCSCEEEESSCCHHHHHHHHHTTSC--SEEEE
T ss_pred HHHHHHHcCCCEEEeCCCCHHHHHHHHHCCCC--cEEee
Confidence 44555554567788888888888888887654 55555
No 101
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=42.49 E-value=1.3e+02 Score=26.92 Aligned_cols=152 Identities=9% Similarity=0.049 Sum_probs=85.8
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcCC---HHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYGV---QENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQ 111 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~---e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg 111 (322)
+.++..+..+.+++.|++.|-.=-.-.. +...=+++++.+ .+++-|..... ..++.+...+ +-+.|+.++
T Consensus 146 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~-----g~~~~l~vDan-~~~~~~~A~~-~~~~l~~~~ 218 (377)
T 3my9_A 146 DFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEF-----GERIDLRLDFN-QALTPFGAMK-ILRDVDAFR 218 (377)
T ss_dssp SHHHHHHHHHHHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHH-----GGGSEEEEECT-TCCCTTTHHH-HHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHh-----CCCCeEEEeCC-CCcCHHHHHH-HHHHHhhcC
Confidence 4455556667778889998875322111 122234555542 24445555542 2334333322 334555555
Q ss_pred CCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEE-EecCCCHHHHHHHHhhcCCCCceecee
Q 041428 112 LDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDV-GVCNFTLKKLNKLLNFAKTKPSVCQME 190 (322)
Q Consensus 112 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~i-Gvs~~~~~~l~~~~~~~~~~~~~~q~~ 190 (322)
+++ +..|-+. +-++.+.++++.-.|.-. |=+-++...+.++++.... +++|+.
T Consensus 219 i~~-----iEqP~~~-------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~--d~v~~k 272 (377)
T 3my9_A 219 PTF-----IEQPVPR-------------------RHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAA--DAISVK 272 (377)
T ss_dssp CSC-----EECCSCT-------------------TCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCC--SEEECC
T ss_pred CCE-----EECCCCc-------------------cCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCC--CEEEec
Confidence 443 4444321 225667777776444333 3455678889888887654 677776
Q ss_pred eCCC---CCcHHHHHHHHHcCceEEEeccCCC
Q 041428 191 MHPG---WRNDKILEACKKNGIHVTAYSPLGS 219 (322)
Q Consensus 191 ~~~~---~~~~~ll~~~~~~gi~via~~pl~~ 219 (322)
.... .....+..+|+++|+.++..+.+.+
T Consensus 273 ~~~~GGit~~~~i~~~a~~~gi~~~~~~~~es 304 (377)
T 3my9_A 273 IMKCGGLMKAQSLMAIADTAGLPGYGGTLWEG 304 (377)
T ss_dssp HHHHTSHHHHHHHHHHHHHHTCCEECCEECCS
T ss_pred ccccCCHHHHHHHHHHHHHcCCeEecCCCCCc
Confidence 5332 2226789999999999977555543
No 102
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=42.32 E-value=2e+02 Score=26.23 Aligned_cols=151 Identities=12% Similarity=0.081 Sum_probs=88.1
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCC-------CcCC--------------------------H--HHHHHHHHHHHhcCC
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAK-------QYGV--------------------------Q--ENIGLALKEAMQTGI 78 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~-------~Yg~--------------------------e--~~lG~~l~~~~~~~~ 78 (322)
.+.++..+.++.+++.|++.|-.=- .||. + ..+=+++|+.+
T Consensus 142 ~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~avR~a~---- 217 (418)
T 3r4e_A 142 SDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFEELRKTY---- 217 (418)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHHHHHHHH----
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHc----
Confidence 4567778888899999999876411 1221 0 11223455442
Q ss_pred CCCcEEEEecCCCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcC
Q 041428 79 QRKDLFVTSKLWCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDG 158 (322)
Q Consensus 79 ~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~G 158 (322)
.+++-|..... ..++.+...+ +-+.|+.++ +.++..|-+. +-++.+.++++.-
T Consensus 218 -G~d~~l~vDaN-~~~~~~~A~~-~~~~L~~~~-----i~~iEqP~~~-------------------~d~~~~~~l~~~~ 270 (418)
T 3r4e_A 218 -GFDHHLLHDGH-HRYTPQEAAN-LGKMLEPYQ-----LFWLEDCTPA-------------------ENQEAFRLVRQHT 270 (418)
T ss_dssp -CSSSEEEEECT-TCSCHHHHHH-HHHHHGGGC-----CSEEESCSCC-------------------SSGGGGHHHHHHC
T ss_pred -CCCCeEEEeCC-CCCCHHHHHH-HHHHHHhhC-----CCEEECCCCc-------------------cCHHHHHHHHhcC
Confidence 23455555552 2344443332 223445444 4455655432 1133466777765
Q ss_pred CccEEE-ecCCCHHHHHHHHhhcCCCCceeceeeCCCCC---cHHHHHHHHHcCceEEEeccC
Q 041428 159 LVRDVG-VCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWR---NDKILEACKKNGIHVTAYSPL 217 (322)
Q Consensus 159 kir~iG-vs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~---~~~ll~~~~~~gi~via~~pl 217 (322)
.|--.+ =+-++.+.+.++++.... +++|+.....-. ...+..+|+++|+.++.++.+
T Consensus 271 ~iPIa~dE~~~~~~~~~~~l~~~a~--d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 331 (418)
T 3r4e_A 271 VTPLAVGEIFNTIWDAKDLIQNQLI--DYIRATVVGAGGLTHLRRIADLASLYQVRTGCHGPT 331 (418)
T ss_dssp CSCEEECTTCCSGGGTHHHHHTTCC--SEECCCTTTTTHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred CCCEEEcCCcCCHHHHHHHHHcCCC--CeEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 554333 344578888898887554 778887655432 267999999999999998875
No 103
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=42.20 E-value=1.9e+02 Score=26.02 Aligned_cols=150 Identities=15% Similarity=0.161 Sum_probs=89.4
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhCCCc
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQLDY 114 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~d~ 114 (322)
+.++..+.++.+++.|++.|=.=-..+.+...=+++++. + .++-|..-.. ..++++... + ++.|. .
T Consensus 149 ~~e~~~~~~~~~~~~G~~~~K~Kv~~~~d~~~v~avR~~----~--~~~~l~vDaN-~~~~~~~A~----~-~~~l~--~ 214 (388)
T 3qld_A 149 SLDVLIQSVDAAVEQGFRRVKLKIAPGRDRAAIKAVRLR----Y--PDLAIAADAN-GSYRPEDAP----V-LRQLD--A 214 (388)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECBTTBSHHHHHHHHHH----C--TTSEEEEECT-TCCCGGGHH----H-HHHGG--G
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCcHHHHHHHHHHHHH----C--CCCeEEEECC-CCCChHHHH----H-HHHHh--h
Confidence 367777888888999999864321112222233456655 2 2344443332 244555543 2 34443 3
Q ss_pred cceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHhhcCCCCceeceeeCC
Q 041428 115 LDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVR-DVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHP 193 (322)
Q Consensus 115 iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~ 193 (322)
.++.++-.|-+. +-++.+.+|.+.-.|. +.|=+-++...+.++++.... +++|+..+.
T Consensus 215 ~~i~~iEeP~~~-------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~--d~v~~k~~~ 273 (388)
T 3qld_A 215 YDLQFIEQPLPE-------------------DDWFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAA--RVLNVKPGR 273 (388)
T ss_dssp GCCSCEECCSCT-------------------TCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCC--SEEEECHHH
T ss_pred CCCcEEECCCCc-------------------ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCC--CEEEECchh
Confidence 466777776542 1245566676654443 445566788889888877544 777776543
Q ss_pred CC---CcHHHHHHHHHcCceEEEeccCCC
Q 041428 194 GW---RNDKILEACKKNGIHVTAYSPLGS 219 (322)
Q Consensus 194 ~~---~~~~ll~~~~~~gi~via~~pl~~ 219 (322)
.- ....+..+|+++|+.++..+.+.+
T Consensus 274 ~GGit~~~~ia~~A~~~gi~~~~~~~~es 302 (388)
T 3qld_A 274 LGGFGATLRALDVAGEAGMAAWVGGMYET 302 (388)
T ss_dssp HTSHHHHHHHHHHHHHTTCEEEECCCCCC
T ss_pred hCCHHHHHHHHHHHHHCCCeEEecCccch
Confidence 32 226799999999999987766543
No 104
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=42.11 E-value=1.9e+02 Score=25.94 Aligned_cols=152 Identities=11% Similarity=0.053 Sum_probs=88.8
Q ss_pred ChhHHHHHHHHHHHc-CCCeEecCCCc-C--CHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHh
Q 041428 35 GDEAFKSVFTAIVEG-GYRHIDTAKQY-G--VQENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQEL 110 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~-Gi~~~DTA~~Y-g--~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~L 110 (322)
+.++..+....+++. |++.|-.=-.- . .+...=+++|+. -.+++-|..... ..++.+... .+-+.|+.+
T Consensus 148 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a-----~g~~~~l~vDan-~~~~~~~A~-~~~~~l~~~ 220 (383)
T 3i4k_A 148 PLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELARE-----VGDRVSLRIDIN-ARWDRRTAL-HYLPILAEA 220 (383)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHT-----TTTTSEEEEECT-TCSCHHHHH-HHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHH-----cCCCCEEEEECC-CCCCHHHHH-HHHHHHHhc
Confidence 456666667777887 99998753211 1 111223445543 234555666652 244544433 234566666
Q ss_pred CCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHhhcCCCCceece
Q 041428 111 QLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVR-DVGVCNFTLKKLNKLLNFAKTKPSVCQM 189 (322)
Q Consensus 111 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~ 189 (322)
+++ ++..|-+. +-++.+.++++.-.|. ..|=+-++.+.+.++++.... +++|+
T Consensus 221 ~i~-----~iEqP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~v~~ 274 (383)
T 3i4k_A 221 GVE-----LFEQPTPA-------------------DDLETLREITRRTNVSVMADESVWTPAEALAVVKAQAA--DVIAL 274 (383)
T ss_dssp TCC-----EEESCSCT-------------------TCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCC--SEEEE
T ss_pred CCC-----EEECCCCh-------------------hhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCC--CEEEE
Confidence 644 44444331 2245566666654443 233345678899999887554 78888
Q ss_pred eeCCCCC---cHHHHHHHHHcCceEEEeccCCC
Q 041428 190 EMHPGWR---NDKILEACKKNGIHVTAYSPLGS 219 (322)
Q Consensus 190 ~~~~~~~---~~~ll~~~~~~gi~via~~pl~~ 219 (322)
.....-. -..+..+|+++|+.++..+.+.+
T Consensus 275 k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 307 (383)
T 3i4k_A 275 KTTKHGGLLESKKIAAIAEAGGLACHGATSLEG 307 (383)
T ss_dssp CTTTTTSHHHHHHHHHHHHHTTCEEEECCSCCC
T ss_pred cccccCCHHHHHHHHHHHHHcCCeEEeCCCCcc
Confidence 7655432 26789999999999988776643
No 105
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=40.87 E-value=1.5e+02 Score=24.36 Aligned_cols=93 Identities=17% Similarity=0.135 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCC-----cHHHHHHHHHcCceEEEeccCCC
Q 041428 145 EGVWREMEKLVKDGLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWR-----NDKILEACKKNGIHVTAYSPLGS 219 (322)
Q Consensus 145 ~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~-----~~~ll~~~~~~gi~via~~pl~~ 219 (322)
+++++...+-.++.-|++|=|.+.+.+...++++...-+..++-..+....+ +.+..+..++.|+.|+.-+=+-+
T Consensus 37 ~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~tH~ls 116 (206)
T 1t57_A 37 ERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEGNIVSVTHHAGFREKGQLELEDEARDALLERGVNVYAGSHALS 116 (206)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCSEEEEECCCTTSSSTTCCSSCHHHHHHHHHHTCEEECCSCTTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccCCEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEeecccc
Confidence 5565554444445459999999999888888887541122333222222222 27899999999999988654444
Q ss_pred CCCCCCCCCCHHHHHHHHhcC-CCHHHHH
Q 041428 220 QGAGRDLIHDPTVERIAKKLN-KSPGQIL 247 (322)
Q Consensus 220 ~G~l~~~~~~~~l~~la~~~~-~s~~qla 247 (322)
| .=+.+..++| .+|.++.
T Consensus 117 -G---------~eR~is~kfGG~~p~eii 135 (206)
T 1t57_A 117 -G---------VGRGISNRFGGVTPVEIM 135 (206)
T ss_dssp -T---------HHHHHHHHHCSCCHHHHH
T ss_pred -c---------hhHHHHHhcCCCCHHHHH
Confidence 3 3355666664 6776643
No 106
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=40.65 E-value=2e+02 Score=25.75 Aligned_cols=145 Identities=11% Similarity=-0.027 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHHcCCCeEecCCCcCCHH---HHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhCCC
Q 041428 37 EAFKSVFTAIVEGGYRHIDTAKQYGVQE---NIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQLD 113 (322)
Q Consensus 37 ~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~---~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~d 113 (322)
++..+....+.+.|++.|..=-.-++-+ .+=+++++.+ .+++-|..... ..++.+...+- ++.|.
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~-----G~d~~l~vDan-~~~~~~~a~~~----~~~l~-- 208 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTA-----GSSITMILDAN-QSYDAAAAFKW----ERYFS-- 208 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHH-----CTTSEEEEECT-TCCCHHHHHTT----HHHHT--
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhh-----CCCCEEEEECC-CCCCHHHHHHH----HHHHh--
Confidence 6666777888899999887421112211 1223444432 23455555552 23444443332 33343
Q ss_pred cc-ceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEe-cCCCHHHHHHHHhhcCCCCceeceee
Q 041428 114 YL-DLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGV-CNFTLKKLNKLLNFAKTKPSVCQMEM 191 (322)
Q Consensus 114 ~i-Dl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~~~q~~~ 191 (322)
.. ++.++..|-+. +-++.+.++++.-.|--.+- +-++++.++++++.... +++|+..
T Consensus 209 ~~~~i~~iEqP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~v~ik~ 267 (382)
T 2gdq_A 209 EWTNIGWLEEPLPF-------------------DQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCL--DIIQPDV 267 (382)
T ss_dssp TCSCEEEEECCSCS-------------------SCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCC--SEECCCT
T ss_pred hccCCeEEECCCCc-------------------ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCC--CEEecCc
Confidence 23 45566665331 23566777777666554443 33468888988876544 7777766
Q ss_pred CCCCC---cHHHHHHHHHcCceEEEe
Q 041428 192 HPGWR---NDKILEACKKNGIHVTAY 214 (322)
Q Consensus 192 ~~~~~---~~~ll~~~~~~gi~via~ 214 (322)
+..-. ...+..+|+++|+.++..
T Consensus 268 ~~~GGit~~~~i~~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 268 MHVNGIDEFRDCLQLARYFGVRASAH 293 (382)
T ss_dssp TTTTHHHHHHHHHHHHHHHTCEECCC
T ss_pred cccCCHHHHHHHHHHHHHcCCEEeec
Confidence 54322 267999999999999887
No 107
>1vpy_A Protein (hypothetical protein EF0366); TIM alpha/beta barrel fold, structural genomics, joint cente structural genomics, JCSG; 2.52A {Enterococcus faecalis} SCOP: c.1.32.1 PDB: 1ztv_A
Probab=40.64 E-value=1.8e+02 Score=25.19 Aligned_cols=95 Identities=14% Similarity=0.242 Sum_probs=55.7
Q ss_pred CcceeecccCCh---hHHHHHHHHHHHcCCCeEec-CCCcC--CHHHHHHHHHHHHhcCCCCCcEEEEecCCC---CC--
Q 041428 25 PAVGLGTWKSGD---EAFKSVFTAIVEGGYRHIDT-AKQYG--VQENIGLALKEAMQTGIQRKDLFVTSKLWC---AD-- 93 (322)
Q Consensus 25 s~lglG~~~~~~---~~~~~~l~~Al~~Gi~~~DT-A~~Yg--~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~---~~-- 93 (322)
=.||.++|+... -...+-|..... -.+.+.. +..|. +++.+-++.++. .+++..+.|+.. +.
T Consensus 14 i~iG~sgWs~~~w~~~~~~~~L~~Ya~-~F~tVEiNsTFY~~p~~~t~~~W~~~t------P~~F~F~vKa~r~iTH~~r 86 (289)
T 1vpy_A 14 IRLGLTSFSEHDYLTGKKRSTLYEYAS-HLPLVEMDTAYYGIPPKERVAEWVKAV------PENFRFVMKVYSGISCQGE 86 (289)
T ss_dssp EEEEESTTC----------CCHHHHHH-HCSEEEECHHHHSCCCHHHHHHHHHTS------CTTCEEEEECCTTTTTCSC
T ss_pred EEEecCCCCChhhcCCChhhHHHHHHh-hCCEEEECccccCCCCHHHHHHHHHhC------CCCcEEEEEechheecccc
Confidence 356777776321 111223333333 2555443 34577 788888888753 789999999843 11
Q ss_pred C----Ch-HHHHHHHHHHHHHhC-CCccceeEeecCCCC
Q 041428 94 L----SP-DRVRSALNNTLQELQ-LDYLDLYLIHWPFRL 126 (322)
Q Consensus 94 ~----~~-~~i~~~~~~SL~~Lg-~d~iDl~~lH~p~~~ 126 (322)
. .. +.+-+.+.++++-|+ -+++..+++.-|...
T Consensus 87 l~~~~~~~~~~~~~F~~~~~pL~~~~kLG~vL~Q~Ppsf 125 (289)
T 1vpy_A 87 WQTYYASEEEMITAFLESMAPLIESKKLFAFLVQFSGTF 125 (289)
T ss_dssp GGGTCSSHHHHHHHHHHHTHHHHTTTCEEEEEEECCTTC
T ss_pred cCCccchhHHHHHHHHHHHHhhccCCCEEEEEEEcCCCC
Confidence 1 11 334467777888883 278999999887543
No 108
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=40.62 E-value=1.4e+02 Score=23.88 Aligned_cols=46 Identities=15% Similarity=0.341 Sum_probs=32.3
Q ss_pred cEEEecC-CCHHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEE
Q 041428 161 RDVGVCN-FTLKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTA 213 (322)
Q Consensus 161 r~iGvs~-~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via 213 (322)
..||+++ .++++++.+.+.+- +++ +++.. ..++++.|++.|+.++.
T Consensus 63 ~~ig~~~v~~~~~~~~a~~~Ga---d~i---v~~~~-~~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 63 AIIGAGTVTSVEQCRKAVESGA---EFI---VSPHL-DEEISQFCKEKGVFYMP 109 (205)
T ss_dssp CEEEEESCCSHHHHHHHHHHTC---SEE---ECSSC-CHHHHHHHHHHTCEEEC
T ss_pred cEEEecccCCHHHHHHHHHcCC---CEE---EcCCC-CHHHHHHHHHcCCcEEC
Confidence 3588844 78888888877543 444 22222 26799999999999986
No 109
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=39.03 E-value=1.7e+02 Score=25.12 Aligned_cols=48 Identities=17% Similarity=0.279 Sum_probs=34.1
Q ss_pred cceeecccCChh----HHHHHHHHHHHcCCCeEecCC-----CcC-CHHHHHHHHHHH
Q 041428 26 AVGLGTWKSGDE----AFKSVFTAIVEGGYRHIDTAK-----QYG-VQENIGLALKEA 73 (322)
Q Consensus 26 ~lglG~~~~~~~----~~~~~l~~Al~~Gi~~~DTA~-----~Yg-~e~~lG~~l~~~ 73 (322)
++|+-+|.+... ...+.++.|-+.|++.++... .|+ .-+.+.+.+++.
T Consensus 14 ~~g~~~~s~~~~~~~~~~~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~ 71 (303)
T 3l23_A 14 EIGLQIYSLSQELYKGDVAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDA 71 (303)
T ss_dssp CCEEEGGGGGGGGGSSCHHHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHT
T ss_pred ceEEEEEEchhhhccCCHHHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHc
Confidence 578877775443 567899999999999999875 344 344456666654
No 110
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=38.97 E-value=1.8e+02 Score=27.03 Aligned_cols=168 Identities=11% Similarity=0.062 Sum_probs=96.0
Q ss_pred HHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcCCCCCcEEEEecC-----C------C----------------CC
Q 041428 41 SVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTGIQRKDLFVTSKL-----W------C----------------AD 93 (322)
Q Consensus 41 ~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~~~R~~~~i~tK~-----~------~----------------~~ 93 (322)
..+..|+-.|---++-.+.++.+. -+.|.+.++. +-..+.|.+.- + + ..
T Consensus 26 ~~fA~ai~~G~a~~~~Cp~~~~~~--~~~la~~lap--pI~~V~iG~G~~~v~iGGEtvL~rhE~tf~n~p~ia~~V~D~ 101 (446)
T 4djd_C 26 LAFAMNLASGKASLDSCPYVSDAA--REALDAAAAP--PIAKVVLGAGPTAVEMGDETELFRHDKRFYHETAIAIQVSDN 101 (446)
T ss_dssp HHHHHHHHHTCSCGGGCSCSCHHH--HHHHHHTTSC--SSCEEEESSTTSCEEEECCCCSSGGGSCCCSCCEEEEEEETT
T ss_pred HHHHHHHHcCCCCcccCCCCcHHH--HHHHHhhccC--CceeEEecCCcEEEEECCeeeEEeCCcCCCCCCeEEEEEeCC
Confidence 455667777877777777776432 3345554322 34455555432 1 0 12
Q ss_pred CChHHHHHHHHHHHH----HhCC-CccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCC
Q 041428 94 LSPDRVRSALNNTLQ----ELQL-DYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNF 168 (322)
Q Consensus 94 ~~~~~i~~~~~~SL~----~Lg~-d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~ 168 (322)
.+.+.+...++..-+ +-|- -.+|++.|+.-... .+.....++.+++. -=--+-|.++
T Consensus 102 ~~e~~~~~~~~~~~~~~~~rvg~~~~~D~ial~~~s~d-----------------pe~~~~vVk~V~e~-~dvPL~IDS~ 163 (446)
T 4djd_C 102 LSSEELKAKVEAINGLNFDRVGQHYTIQAIAIRHDADD-----------------PAAFKAAVASVAAA-TQLNLVLMAD 163 (446)
T ss_dssp SCHHHHHHHHHHHTTCCEEETTEEECCCEEEEECCSSS-----------------THHHHHHHHHHHTT-CCSEEEEECS
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhccCcEEEEEeCCCC-----------------HHHHHHHHHHHHHh-CCCCEEEecC
Confidence 233445555444321 2231 16889999875321 24444445444443 2235788899
Q ss_pred CHHHHHHHHhhcC-CCCceeceeeCCCCCcHHHHHHHHHcCceEEEeccCCCCCCCCCCCCCHHHHHHHHhcCC
Q 041428 169 TLKKLNKLLNFAK-TKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSPLGSQGAGRDLIHDPTVERIAKKLNK 241 (322)
Q Consensus 169 ~~~~l~~~~~~~~-~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~pl~~~G~l~~~~~~~~l~~la~~~~~ 241 (322)
+++.+++.++.+. .++.++-.. .++-+.+.+.++++|..++++++ . +-..+.+.+.+.+.|+
T Consensus 164 dpevleaALea~a~~~plI~sat---~dn~e~m~~lAa~y~~pVi~~~~--d------l~~lkelv~~a~~~GI 226 (446)
T 4djd_C 164 DPDVLKEALAGVADRKPLLYAAT---GANYEAMTALAKENNCPLAVYGN--G------LEELAELVDKIVALGH 226 (446)
T ss_dssp CHHHHHHHHGGGGGGCCEEEEEC---TTTHHHHHHHHHHTTCCEEEECS--S------HHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHhhcCcCCeeEecc---hhhHHHHHHHHHHcCCcEEEEec--c------HHHHHHHHHHHHHCCC
Confidence 9999999999874 445444433 11226899999999999999876 1 1112445555666665
No 111
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=38.01 E-value=2.2e+02 Score=25.53 Aligned_cols=151 Identities=11% Similarity=0.038 Sum_probs=88.9
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcCC---HHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYGV---QENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQ 111 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~---e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg 111 (322)
+.++..+..+.+++.|++.|-.=-.... +...=+++|+. - +++-|..... ..++.+...+ +-+.|+.++
T Consensus 148 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a-----~-~~~~l~vDan-~~~~~~~A~~-~~~~L~~~~ 219 (385)
T 3i6e_A 148 DFDADIALMERLRADGVGLIKLKTGFRDHAFDIMRLELIARD-----F-PEFRVRVDYN-QGLEIDEAVP-RVLDVAQFQ 219 (385)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECSSSCHHHHHHHHHHHHHH-----C-TTSEEEEECT-TCCCGGGHHH-HHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHh-----C-CCCeEEEECC-CCCCHHHHHH-HHHHHHhcC
Confidence 4555566677888899999875322211 22223455554 2 4555555552 2344444332 334555555
Q ss_pred CCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHhhcCCCCceecee
Q 041428 112 LDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVR-DVGVCNFTLKKLNKLLNFAKTKPSVCQME 190 (322)
Q Consensus 112 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~ 190 (322)
+++ +..|-+. +-++.+.+|+++-.|. ..|=+-++...+.++++.... +++|+.
T Consensus 220 i~~-----iEqP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~--d~v~~k 273 (385)
T 3i6e_A 220 PDF-----IEQPVRA-------------------HHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGIC--DGVSIK 273 (385)
T ss_dssp CSC-----EECCSCT-------------------TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCC--SEEEEC
T ss_pred CCE-----EECCCCc-------------------ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCC--CEEEec
Confidence 443 4444321 2256677888765554 334455678889888887554 777776
Q ss_pred eCCC---CCcHHHHHHHHHcCceEEEeccCCC
Q 041428 191 MHPG---WRNDKILEACKKNGIHVTAYSPLGS 219 (322)
Q Consensus 191 ~~~~---~~~~~ll~~~~~~gi~via~~pl~~ 219 (322)
.... .....+..+|+++|+.++..+.+.+
T Consensus 274 ~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 305 (385)
T 3i6e_A 274 IMKSGGLTRAQTVARIAAAHGLMAYGGDMFEA 305 (385)
T ss_dssp HHHHTSHHHHHHHHHHHHHTTCEEEECCCSCC
T ss_pred ccccCCHHHHHHHHHHHHHcCCEEEeCCCCcc
Confidence 5432 2226799999999999987655543
No 112
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=37.84 E-value=1e+02 Score=27.44 Aligned_cols=108 Identities=10% Similarity=0.117 Sum_probs=56.7
Q ss_pred CCChHHHHHHHHHHHHHhCCCccceeEee-cCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHc-CCccEEEec--CC
Q 041428 93 DLSPDRVRSALNNTLQELQLDYLDLYLIH-WPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKD-GLVRDVGVC--NF 168 (322)
Q Consensus 93 ~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~-Gkir~iGvs--~~ 168 (322)
.++.+ -+..+-+.|.++|+++|.+=+.- +|..+.. .+ ......|+.++++++. ..++...+. +.
T Consensus 26 ~~~~e-~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~-------~g----~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~ 93 (345)
T 1nvm_A 26 QYTLD-DVRAIARALDKAKVDSIEVAHGDGLQGSSFN-------YG----FGRHTDLEYIEAVAGEISHAQIATLLLPGI 93 (345)
T ss_dssp CCCHH-HHHHHHHHHHHHTCSEEECSCTTSTTCCBTT-------TB----CCSSCHHHHHHHHHTTCSSSEEEEEECBTT
T ss_pred CCCHH-HHHHHHHHHHHcCCCEEEEecCCCCCCCCCc-------cc----CCCCCHHHHHHHHHhhCCCCEEEEEecCCc
Confidence 34433 34455567788998887773110 2211100 00 1112345566666654 245555552 22
Q ss_pred -CHHHHHHHHhhcCCCCceecee--eCCCCCcHHHHHHHHHcCceEEEec
Q 041428 169 -TLKKLNKLLNFAKTKPSVCQME--MHPGWRNDKILEACKKNGIHVTAYS 215 (322)
Q Consensus 169 -~~~~l~~~~~~~~~~~~~~q~~--~~~~~~~~~ll~~~~~~gi~via~~ 215 (322)
....++++.+. ++ +.+.+. .+....-.+.+++|+++|+.++.+-
T Consensus 94 ~~~~~i~~a~~a-Gv--d~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~ 140 (345)
T 1nvm_A 94 GSVHDLKNAYQA-GA--RVVRVATHCTEADVSKQHIEYARNLGMDTVGFL 140 (345)
T ss_dssp BCHHHHHHHHHH-TC--CEEEEEEETTCGGGGHHHHHHHHHHTCEEEEEE
T ss_pred ccHHHHHHHHhC-Cc--CEEEEEEeccHHHHHHHHHHHHHHCCCEEEEEE
Confidence 35666666665 33 333333 3333333789999999999887763
No 113
>3ec1_A YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase, signaling protein; HET: GDP; 2.36A {Geobacillus stearothermophilus}
Probab=37.81 E-value=2.2e+02 Score=25.38 Aligned_cols=117 Identities=19% Similarity=0.153 Sum_probs=71.3
Q ss_pred CChhHHHHHHHHHHHcC---CCeEecCCCcCC-HHHHHHHHHHHHhcCCCCCcEEEEecCC--CCCCChHHHHHHHHHHH
Q 041428 34 SGDEAFKSVFTAIVEGG---YRHIDTAKQYGV-QENIGLALKEAMQTGIQRKDLFVTSKLW--CADLSPDRVRSALNNTL 107 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~G---i~~~DTA~~Yg~-e~~lG~~l~~~~~~~~~R~~~~i~tK~~--~~~~~~~~i~~~~~~SL 107 (322)
.+.+...+++....+.- +-.+|.++..++ ...+-+.+. .+.-++|.+|.- ......+.+.+.+.+.+
T Consensus 56 ~~~e~f~~~L~~~~~~~~lil~VvD~~d~~~s~~~~l~~~l~-------~~piilV~NK~DLl~~~~~~~~~~~~l~~~~ 128 (369)
T 3ec1_A 56 LDDDDFLSMLHRIGESKALVVNIVDIFDFNGSFIPGLPRFAA-------DNPILLVGNKADLLPRSVKYPKLLRWMRRMA 128 (369)
T ss_dssp ---CHHHHHHHHHHHHCCEEEEEEETTCSGGGCCSSHHHHCT-------TSCEEEEEECGGGSCTTCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhccCcEEEEEEECCCCCCchhhHHHHHhC-------CCCEEEEEEChhcCCCccCHHHHHHHHHHHH
Confidence 34566777887775442 346887765541 111222221 356788999982 22223456667777777
Q ss_pred HHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCCHHHH
Q 041428 108 QELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFTLKKL 173 (322)
Q Consensus 108 ~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l 173 (322)
+.+|....+++.+-.-. .....++++.+.++.+...|--+|-+|..-..+
T Consensus 129 ~~~g~~~~~v~~iSA~~----------------g~gi~~L~~~I~~~~~~~~i~~vG~~nvGKStl 178 (369)
T 3ec1_A 129 EELGLCPVDVCLVSAAK----------------GIGMAKVMEAINRYREGGDVYVVGCTNVGKSTF 178 (369)
T ss_dssp HTTTCCCSEEEECBTTT----------------TBTHHHHHHHHHHHHTTSCEEEECCTTSSHHHH
T ss_pred HHcCCCcccEEEEECCC----------------CCCHHHHHHHHHhhcccCcEEEEcCCCCchHHH
Confidence 88886444555442211 134788999999888888899999999975544
No 114
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=37.65 E-value=1.5e+02 Score=27.40 Aligned_cols=94 Identities=13% Similarity=0.150 Sum_probs=62.9
Q ss_pred ChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecC--CCHHH
Q 041428 95 SPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCN--FTLKK 172 (322)
Q Consensus 95 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~--~~~~~ 172 (322)
+++.+...+.+.++.+ +++++-.|-+. +-|+.+.+|.+..+|-=.|=-. ++++.
T Consensus 271 t~~e~~~~~~~ll~~y-----~i~~IEdPl~~-------------------dD~~g~~~L~~~~~ipI~gDE~~vt~~~~ 326 (439)
T 2akz_A 271 TGDQLGALYQDFVRDY-----PVVSIEDPFDQ-------------------DDWAAWSKFTANVGIQIVGDDLTVTNPKR 326 (439)
T ss_dssp CHHHHHHHHHHHHHHS-----CEEEEECCSCT-------------------TCHHHHHHHHHTCSSEEEESTTTTTCHHH
T ss_pred CHHHHHHHHHHHHHhC-----CCcEEECCCCc-------------------ccHHHHHHHHhCCCCEEEeCCCccCCHHH
Confidence 4455555555555543 57888877542 3377788888888876665443 37899
Q ss_pred HHHHHhhcCCCCceeceeeCCCC---CcHHHHHHHHHcCceEEEe
Q 041428 173 LNKLLNFAKTKPSVCQMEMHPGW---RNDKILEACKKNGIHVTAY 214 (322)
Q Consensus 173 l~~~~~~~~~~~~~~q~~~~~~~---~~~~ll~~~~~~gi~via~ 214 (322)
+.++++.... +++|+..+-.- ...++..+|+++|+.++..
T Consensus 327 ~~~~i~~~a~--d~i~iKv~qiGGitea~~ia~lA~~~g~~~~~s 369 (439)
T 2akz_A 327 IERAVEEKAC--NCLLLKVNQIGSVTEAIQACKLAQENGWGVMVS 369 (439)
T ss_dssp HHHHHHTTCC--SEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHhCCC--CEEEechhhcCCHHHHHHHHHHHHHCCCeEEee
Confidence 9999887544 66777554322 2267999999999997663
No 115
>2bas_A YKUI protein; EAL domain, structural genom protein structure initiative, midwest center for structural genomics, MCSG, signaling protein; 2.61A {Bacillus subtilis} SCOP: c.1.33.1 d.110.6.2 PDB: 2w27_A*
Probab=37.55 E-value=47 Score=30.63 Aligned_cols=115 Identities=16% Similarity=0.159 Sum_probs=62.5
Q ss_pred CcEEEEecCCCCCCChHHHHHH--HHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcC
Q 041428 81 KDLFVTSKLWCADLSPDRVRSA--LNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDG 158 (322)
Q Consensus 81 ~~~~i~tK~~~~~~~~~~i~~~--~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~G 158 (322)
....++..+.........+... +.+.+++.+.. ..-+.+--.+... ......+.+.+..|++.|
T Consensus 105 ~~~~l~iNls~~~l~~~~~~~~~~l~~~l~~~~~~-~~~l~lEItE~~~-------------~~~~~~~~~~l~~Lr~~G 170 (431)
T 2bas_A 105 SDLLIFMNQDANLLMLDHGESFLELLKEYEAKGIE-LHRFVLEITEHNF-------------EGDIEQLYHMLAYYRTYG 170 (431)
T ss_dssp TTCEEEEECCHHHHGGGTTHHHHHHHHHHHHTTCC-GGGEEEEECCTTC-------------CSCHHHHHHHHHHHHTTT
T ss_pred CCCeEEEEECHHHHCCcccccHHHHHHHHHHcCCC-CCeEEEEEECChh-------------hCCHHHHHHHHHHHHHCC
Confidence 3455666653222222233344 67777887764 3334444333211 134578999999999999
Q ss_pred Cc---cEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCC--------c--HHHHHHHHHcCceEEEec
Q 041428 159 LV---RDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWR--------N--DKILEACKKNGIHVTAYS 215 (322)
Q Consensus 159 ki---r~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~--------~--~~ll~~~~~~gi~via~~ 215 (322)
-- ..+|....+...+..+ +++.+-+.-+.... . ..++..|++.|+.|+|=+
T Consensus 171 ~~ialDDFG~g~ssl~~L~~l------~~d~iKID~s~v~~~~~~~~~~~il~~ii~la~~lg~~vvAEG 234 (431)
T 2bas_A 171 IKIAVDNIGKESSNLDRIALL------SPDLLKIDLQALKVSQPSPSYEHVLYSISLLARKIGAALLYED 234 (431)
T ss_dssp CEEEEEEETTTBCCHHHHHHH------CCSEEEEECTTTC----CCHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CEEEEECCCCCcHHHHHHHhC------CCCEEEECHHHHhhhhcCHhHHHHHHHHHHHHHHcCCEEEEEe
Confidence 73 3334333333333332 23444444333321 1 568888999999999843
No 116
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=37.10 E-value=1e+02 Score=29.17 Aligned_cols=126 Identities=16% Similarity=0.119 Sum_probs=81.3
Q ss_pred HHHHHHHHcCCCeEe--cCCCc---CC-------HHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHH---------
Q 041428 41 SVFTAIVEGGYRHID--TAKQY---GV-------QENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRV--------- 99 (322)
Q Consensus 41 ~~l~~Al~~Gi~~~D--TA~~Y---g~-------e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i--------- 99 (322)
+-.+..-..|+..+= ||.+| |+ -+.+..+-++.+. +-.+-++|+++-++.... ....
T Consensus 112 e~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~g-g~L~G~~~lTaGLGGMgG-AQplA~~mag~v~ 189 (552)
T 2fkn_A 112 EHFHELEKKGLMMYGQMTAGSWIYIGSQGILQGTYETFAELARQHFG-GSLKGTLTLTAGLGGMGG-AQPLSVTMNEGVV 189 (552)
T ss_dssp HHHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHSS-SCCTTCEEEEECCSTTTT-HHHHHHHHTTCEE
T ss_pred HHHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcC-CCCCceEEEEecCCccch-hhHHHHHHcCceE
Confidence 445667778886553 66665 23 2333444444321 235667899888753211 0000
Q ss_pred ---HHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHH
Q 041428 100 ---RSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFTLKKLNKL 176 (322)
Q Consensus 100 ---~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~ 176 (322)
.-.-.+.-+|+.+.|+|-+. .+.+++++...+.+++|+...||+-.--++.++++
T Consensus 190 i~~Evd~~ri~~R~~~gyld~~~----------------------~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l 247 (552)
T 2fkn_A 190 IAVEVDEKRIDKRIETKYCDRKT----------------------ASIEEALAWAEEAKLAGKPLSIALLGNAAEVHHTL 247 (552)
T ss_dssp EEEESCHHHHHHHHHTTSCSEEE----------------------SCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHH
T ss_pred EEEEECHHHHHHHHhCCcceeEc----------------------CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHH
Confidence 00123344678889999863 35789999999999999999999999989999999
Q ss_pred HhhcCCCCce--eceee
Q 041428 177 LNFAKTKPSV--CQMEM 191 (322)
Q Consensus 177 ~~~~~~~~~~--~q~~~ 191 (322)
++.. +.|++ -|...
T Consensus 248 ~~~~-i~~DlvtDQTSa 263 (552)
T 2fkn_A 248 LNRG-VKIDIVTDQTSA 263 (552)
T ss_dssp HTTT-CCCSEECCCSCT
T ss_pred HHCC-CCCCCCCCCccc
Confidence 9874 55554 35544
No 117
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=36.86 E-value=13 Score=32.78 Aligned_cols=108 Identities=12% Similarity=0.119 Sum_probs=69.6
Q ss_pred HcCCccEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCC-----CcHHHHHHHHHcCceEEEeccCCCCCCCCCCCCCH
Q 041428 156 KDGLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGW-----RNDKILEACKKNGIHVTAYSPLGSQGAGRDLIHDP 230 (322)
Q Consensus 156 ~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~-----~~~~ll~~~~~~gi~via~~pl~~~G~l~~~~~~~ 230 (322)
...++-.+-=++.+.+...++.+...-++.-+.. ++-.+ ++..+.+++++.++-++.-++-.+ +..
T Consensus 155 ~~~kv~~vsQTT~s~~~~~~iv~~L~~r~p~~~~-~~tIC~AT~~RQ~av~~la~~~D~miVVGg~nSS--------NT~ 225 (297)
T 3dnf_A 155 KHERVGIVAQTTQNEEFFKEVVGEIALWVKEVKV-INTICNATSLRQESVKKLAPEVDVMIIIGGKNSG--------NTR 225 (297)
T ss_dssp GCSEEEEEECTTCCHHHHHHHHHHHHHHSSEEEE-ECCCCSHHHHHHHHHHHHGGGSSEEEEESCTTCH--------HHH
T ss_pred CCCcEEEEEecCCcHHHHHHHHHHHHHhCCCCCC-CCCccHHHHHHHHHHHHHHhhCCEEEEECCCCCc--------hhH
Confidence 4455666666677777666665543321111222 23222 236788888888888876444332 347
Q ss_pred HHHHHHHhcCC------CHHHHHHHHhhhcC-CEEecCCCCHHHHHHhH
Q 041428 231 TVERIAKKLNK------SPGQILLKWGIHRG-TSVIPKSTHPDRIKENI 272 (322)
Q Consensus 231 ~l~~la~~~~~------s~~qlal~~~l~~~-~~~i~g~~~~~~l~~nl 272 (322)
+|.++|++.|. +..++-..|+-... +.+..|+|+|+.+.+.+
T Consensus 226 rL~eia~~~~~~ty~Ie~~~el~~~wl~~~~~VGITAGASTP~~li~eV 274 (297)
T 3dnf_A 226 RLYYISKELNPNTYHIETAEELQPEWFRGVKRVGISAGASTPDWIIEQV 274 (297)
T ss_dssp HHHHHHHHHCSSEEEESSGGGCCGGGGTTCSEEEEEECTTCCHHHHHHH
T ss_pred HHHHHHHhcCCCEEEeCChHHCCHHHhCCCCEEEEeecCCCCHHHHHHH
Confidence 89999999874 56788888887555 77889999999876654
No 118
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=36.73 E-value=2.5e+02 Score=26.04 Aligned_cols=94 Identities=13% Similarity=0.100 Sum_probs=58.4
Q ss_pred ChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcC-CccEEEe--cCCCHH
Q 041428 95 SPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDG-LVRDVGV--CNFTLK 171 (322)
Q Consensus 95 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~G-kir~iGv--s~~~~~ 171 (322)
+++.+..-.++.++.. +++++-.|-+. +-|+.+.+|.+.- +|--+|= ...+++
T Consensus 280 t~~elid~y~~lle~y-----pI~~IEDPl~~-------------------dD~eg~a~Lt~~lg~i~IvGDEl~vTn~~ 335 (441)
T 3qtp_A 280 DVDGLIAEYVDYGKHY-----PIASIEDPFAE-------------------DDWAAWNKFTVEHGNFQIVGDDLLVTNPA 335 (441)
T ss_dssp CHHHHHHHHHHHHHHS-----CEEEEESCSCT-------------------TCHHHHHHHHHHTTTSEEEESTTTTTCHH
T ss_pred CHHHHHHHHHHHhhhc-----ceeeecCCCCh-------------------HHHHHHHHHHHhcCCceEEeccccccCHH
Confidence 4455555555555543 48888877553 2244444444442 5666663 344789
Q ss_pred HHHHHHhhcCCCCceeceeeCCCCC---cHHHHHHHHHcCceEEEe
Q 041428 172 KLNKLLNFAKTKPSVCQMEMHPGWR---NDKILEACKKNGIHVTAY 214 (322)
Q Consensus 172 ~l~~~~~~~~~~~~~~q~~~~~~~~---~~~ll~~~~~~gi~via~ 214 (322)
.+.++++.... +++++..|-.-. ..++..+|+++|+.++..
T Consensus 336 ~i~~~Ie~~a~--n~IlIKvnqiGGITEalkaa~lA~~~G~~vmvs 379 (441)
T 3qtp_A 336 RVQMAMDKNAC--NSVLIKVNQIGTLTETFKTIKMAQEKGWGVMAS 379 (441)
T ss_dssp HHHHHHHHTCC--SEEEECGGGTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHcCCC--CEEEecccccccHHHHHHHHHHHHHcCCeEEEe
Confidence 99999887544 666666554332 257889999999998763
No 119
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=36.34 E-value=2.3e+02 Score=25.09 Aligned_cols=93 Identities=10% Similarity=0.031 Sum_probs=49.6
Q ss_pred cEEEEecCCCCC-----CChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHH
Q 041428 82 DLFVTSKLWCAD-----LSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVK 156 (322)
Q Consensus 82 ~~~i~tK~~~~~-----~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~ 156 (322)
++-|..|+...+ .+.+.. ..+-+.|+..|+|+|++ |......... . ....-.++...++++
T Consensus 209 ~~pv~vRls~~~~~~~g~~~~~~-~~la~~L~~~Gvd~i~v---s~g~~~~~~~----~------~~~~~~~~~~~~ik~ 274 (340)
T 3gr7_A 209 DGPLFVRISASDYHPDGLTAKDY-VPYAKRMKEQGVDLVDV---SSGAIVPARM----N------VYPGYQVPFAELIRR 274 (340)
T ss_dssp CSCEEEEEESCCCSTTSCCGGGH-HHHHHHHHHTTCCEEEE---ECCCSSCCCC----C------CCTTTTHHHHHHHHH
T ss_pred CCceEEEeccccccCCCCCHHHH-HHHHHHHHHcCCCEEEE---ecCCccCCCC----C------CCccccHHHHHHHHH
Confidence 455667874432 233332 34566677888665554 4321110000 0 000112344556666
Q ss_pred cCCccEEEecCC-CHHHHHHHHhhcCCCCceecee
Q 041428 157 DGLVRDVGVCNF-TLKKLNKLLNFAKTKPSVCQME 190 (322)
Q Consensus 157 ~Gkir~iGvs~~-~~~~l~~~~~~~~~~~~~~q~~ 190 (322)
.=.+--|+.... +++..+++++.+.. +.+++.
T Consensus 275 ~~~iPVi~~GgI~s~e~a~~~L~~G~a--D~V~iG 307 (340)
T 3gr7_A 275 EADIPTGAVGLITSGWQAEEILQNGRA--DLVFLG 307 (340)
T ss_dssp HTTCCEEEESSCCCHHHHHHHHHTTSC--SEEEEC
T ss_pred HcCCcEEeeCCCCCHHHHHHHHHCCCe--eEEEec
Confidence 556777888876 68889999887644 555553
No 120
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=36.21 E-value=2.4e+02 Score=25.23 Aligned_cols=149 Identities=10% Similarity=0.075 Sum_probs=89.6
Q ss_pred CChhHHHHHHHHHHHc-CCCeEecCCCc-C--CHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHH
Q 041428 34 SGDEAFKSVFTAIVEG-GYRHIDTAKQY-G--VQENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQE 109 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~-Gi~~~DTA~~Y-g--~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~ 109 (322)
.+.++..+..+.+++. |++.|-.=-.- . .....=+++++. -.+++-|..... ..++.+.. .+-++.
T Consensus 150 ~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~-----~g~~~~l~vDan-~~~~~~~a----~~~~~~ 219 (372)
T 3tj4_A 150 FTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRER-----VDSAVRIAIDGN-GKWDLPTC----QRFCAA 219 (372)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHH-----SCTTCEEEEECT-TCCCHHHH----HHHHHH
T ss_pred CCHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHH-----cCCCCcEEeeCC-CCCCHHHH----HHHHHH
Confidence 3667777788888999 99988753221 1 122233455554 224555665652 23443332 233344
Q ss_pred hCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHhhcCCCCceec
Q 041428 110 LQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVR-DVGVCNFTLKKLNKLLNFAKTKPSVCQ 188 (322)
Q Consensus 110 Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q 188 (322)
|. ..++.++..|-+. +-++.+.++++.-.+- ..|=+-++...+.++++.... +++|
T Consensus 220 l~--~~~i~~iEqP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~v~ 276 (372)
T 3tj4_A 220 AK--DLDIYWFEEPLWY-------------------DDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAV--AYVQ 276 (372)
T ss_dssp TT--TSCEEEEESCSCT-------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC--SEEC
T ss_pred Hh--hcCCCEEECCCCc-------------------hhHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCC--CEEE
Confidence 43 3567777766432 2256677777765554 334456678899998887554 7777
Q ss_pred eeeCCCCC---cHHHHHHHHHcCceEEEec
Q 041428 189 MEMHPGWR---NDKILEACKKNGIHVTAYS 215 (322)
Q Consensus 189 ~~~~~~~~---~~~ll~~~~~~gi~via~~ 215 (322)
+..+-.-. ...+..+|+++|+.++.++
T Consensus 277 ~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 306 (372)
T 3tj4_A 277 PDVTRLGGITEYIQVADLALAHRLPVVPHA 306 (372)
T ss_dssp CCTTTTTHHHHHHHHHHHHHHTTCCBCCCC
T ss_pred eCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 76654322 2679999999999987654
No 121
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=35.87 E-value=2.4e+02 Score=25.14 Aligned_cols=152 Identities=10% Similarity=0.003 Sum_probs=88.9
Q ss_pred ChhHHHHHHHHHHHc-CCCeEecCCCcCC---HHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHh
Q 041428 35 GDEAFKSVFTAIVEG-GYRHIDTAKQYGV---QENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQEL 110 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~-Gi~~~DTA~~Yg~---e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~L 110 (322)
+.++..+..+.+++. |++.|-.=-.... +...=+++++.+ .+++-|..... ..++.+.. .+-++.|
T Consensus 139 ~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~-----g~~~~l~vDan-~~~~~~~a----~~~~~~l 208 (367)
T 3dg3_A 139 DPVKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERF-----GDAIELYVDGN-RGWSAAES----LRAMREM 208 (367)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHH-----GGGSEEEEECT-TCSCHHHH----HHHHHHT
T ss_pred CHHHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHh-----CCCCEEEEECC-CCCCHHHH----HHHHHHH
Confidence 456677777888888 9998764322111 122334555542 23444555542 23443332 2233444
Q ss_pred CCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEE-EecCCCHHHHHHHHhhcCCCCceece
Q 041428 111 QLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDV-GVCNFTLKKLNKLLNFAKTKPSVCQM 189 (322)
Q Consensus 111 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~i-Gvs~~~~~~l~~~~~~~~~~~~~~q~ 189 (322)
. ..++.++..|-+. +-++.+.++++.-.|.=. |=+-++.+.+.++++.... +++|+
T Consensus 209 ~--~~~i~~iEqP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~v~~ 265 (367)
T 3dg3_A 209 A--DLDLLFAEELCPA-------------------DDVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSA--TAISI 265 (367)
T ss_dssp T--TSCCSCEESCSCT-------------------TSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSC--SEEEE
T ss_pred H--HhCCCEEECCCCc-------------------ccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCC--CEEEe
Confidence 3 2344556655432 224567777776555443 3345678889988887654 77777
Q ss_pred eeCCC--CCcHHHHHHHHHcCceEEEeccCCC
Q 041428 190 EMHPG--WRNDKILEACKKNGIHVTAYSPLGS 219 (322)
Q Consensus 190 ~~~~~--~~~~~ll~~~~~~gi~via~~pl~~ 219 (322)
...-. .....+..+|+++|+.++..+.+.+
T Consensus 266 k~~~~Git~~~~ia~~A~~~gi~~~~~~~~es 297 (367)
T 3dg3_A 266 KTARTGFTGSTRVHHLAEGLGLDMVMGNQIDG 297 (367)
T ss_dssp CHHHHTTHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred ehhhhhHHHHHHHHHHHHHcCCeEEECCcCCc
Confidence 65543 2226799999999999998776543
No 122
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=35.49 E-value=2.4e+02 Score=25.06 Aligned_cols=151 Identities=18% Similarity=0.182 Sum_probs=89.0
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHh-CCC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQEL-QLD 113 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~L-g~d 113 (322)
+.++..+...++.+.|++.|..=-. ++-+..-+.++.. ++. -.+++-|..+.. ..++.+. ..+-++.| .
T Consensus 146 ~~~~~~~~a~~~~~~Gf~~iKik~g-~~~~~~~e~v~av-r~a-~g~~~~l~vDan-~~~~~~~----a~~~~~~l~~-- 215 (371)
T 2ps2_A 146 EPEDMRARVAKYRAKGYKGQSVKIS-GEPVTDAKRITAA-LAN-QQPDEFFIVDAN-GKLSVET----ALRLLRLLPH-- 215 (371)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECC-SCHHHHHHHHHHH-TTT-CCTTCEEEEECT-TBCCHHH----HHHHHHHSCT--
T ss_pred CHHHHHHHHHHHHHhChheEEeecC-CCHHHHHHHHHHH-HHh-cCCCCEEEEECC-CCcCHHH----HHHHHHHHHh--
Confidence 5566777778888999999874211 1222222333332 111 123566666663 2334332 23344555 3
Q ss_pred ccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecC-CCHHHHHHHHhhcCCCCceeceeeC
Q 041428 114 YLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCN-FTLKKLNKLLNFAKTKPSVCQMEMH 192 (322)
Q Consensus 114 ~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~-~~~~~l~~~~~~~~~~~~~~q~~~~ 192 (322)
..++ ++..| .+ -++.+.++++.-.|-=++--+ ++++.++++++.... +++|+..+
T Consensus 216 ~~~i-~iE~P------------------~~---~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~--d~v~ik~~ 271 (371)
T 2ps2_A 216 GLDF-ALEAP------------------CA---TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAA--EGIDLKIS 271 (371)
T ss_dssp TCCC-EEECC------------------BS---SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCC--SEEEEEHH
T ss_pred hcCC-cCcCC------------------cC---CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCC--CEEEechh
Confidence 2355 55544 12 356778888776665554443 468889999887654 77777654
Q ss_pred CCC---CcHHHHHHHHHcCceEEEeccCCC
Q 041428 193 PGW---RNDKILEACKKNGIHVTAYSPLGS 219 (322)
Q Consensus 193 ~~~---~~~~ll~~~~~~gi~via~~pl~~ 219 (322)
..- ....+..+|+++|+.++..+.+.+
T Consensus 272 ~~GGit~~~~i~~~A~~~g~~~~~~~~~es 301 (371)
T 2ps2_A 272 KAGGLTRGRRQRDICLAAGYSVSVQETCGS 301 (371)
T ss_dssp HHTSHHHHHHHHHHHHHHTCEEEEECSSCC
T ss_pred hcCCHHHHHHHHHHHHHcCCeEEecCCCcC
Confidence 432 226788999999999999887743
No 123
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=34.50 E-value=2.6e+02 Score=25.16 Aligned_cols=153 Identities=12% Similarity=0.076 Sum_probs=90.2
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCCC-c---C-CHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHH
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAKQ-Y---G-VQENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQ 108 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~~-Y---g-~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~ 108 (322)
.+.++..+.++.+++.|++.|-.=-. + + .+..+- .++.. ++.+ .+++-|..... ..++++ ...+-++
T Consensus 144 ~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~~~~~d~~-~v~av-R~a~-G~~~~L~vDaN-~~~~~~----~A~~~~~ 215 (386)
T 3fv9_G 144 DTPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPALDAE-RITAC-LADR-QPGEWYLADAN-NGLTVE----HALRMLS 215 (386)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCCTTTTHHHHHHH-HHHHH-TTTC-CTTCEEEEECT-TCCCHH----HHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeccCCCCCCCHHHHHH-HHHHH-HHHc-CCCCeEEEECC-CCCCHH----HHHHHHH
Confidence 45677777888889999999875221 1 1 111111 12221 1111 24555666652 233433 2334556
Q ss_pred HhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHhhcCCCCcee
Q 041428 109 ELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVR-DVGVCNFTLKKLNKLLNFAKTKPSVC 187 (322)
Q Consensus 109 ~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~ 187 (322)
.|. +..++ ++..|- + -++.+.++++.-.|. ..|=+-++...+.++++.... +++
T Consensus 216 ~l~-~~~~i-~iEeP~------------------~---~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~--d~v 270 (386)
T 3fv9_G 216 LLP-PGLDI-VLEAPC------------------A---SWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLC--DGV 270 (386)
T ss_dssp HSC-SSCCC-EEECCC------------------S---SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCC--SEE
T ss_pred Hhh-ccCCc-EEecCC------------------C---CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCC--CEE
Confidence 663 34566 666542 2 245677777765553 334456678889888876544 778
Q ss_pred ceeeCCCC---CcHHHHHHHHHcCceEEEeccCCC
Q 041428 188 QMEMHPGW---RNDKILEACKKNGIHVTAYSPLGS 219 (322)
Q Consensus 188 q~~~~~~~---~~~~ll~~~~~~gi~via~~pl~~ 219 (322)
|+.....- ....+..+|+++|+.++..+.+.+
T Consensus 271 ~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 305 (386)
T 3fv9_G 271 GLKVSKQGGITPMLRQRAIAAAAGMVMSVQDTVGS 305 (386)
T ss_dssp EEEHHHHTSHHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred EECccccCCHHHHHHHHHHHHHcCCEEEeCCCCCC
Confidence 88654432 236799999999999998776654
No 124
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=34.28 E-value=1.4e+02 Score=26.01 Aligned_cols=99 Identities=16% Similarity=0.145 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHH
Q 041428 97 DRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFTLKKLNKL 176 (322)
Q Consensus 97 ~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~ 176 (322)
..-+..+-+.|.++|+++|..-..-.|... + .. .+.++.+..+.+...++..+.. -+.+.++++
T Consensus 29 ~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~-~------------~~--~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a 92 (302)
T 2ftp_A 29 VADKIRLVDDLSAAGLDYIEVGSFVSPKWV-P------------QM--AGSAEVFAGIRQRPGVTYAALA-PNLKGFEAA 92 (302)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECSCTTTC-G------------GG--TTHHHHHHHSCCCTTSEEEEEC-CSHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcCEEEECCCcCcccc-c------------cc--cCHHHHHHHhhhcCCCEEEEEe-CCHHHHHHH
Confidence 455667777889999999988764333211 0 01 1233444555555566666665 467788888
Q ss_pred HhhcCCCCceeceeeCCCC----------C------cHHHHHHHHHcCceEEEe
Q 041428 177 LNFAKTKPSVCQMEMHPGW----------R------NDKILEACKKNGIHVTAY 214 (322)
Q Consensus 177 ~~~~~~~~~~~q~~~~~~~----------~------~~~ll~~~~~~gi~via~ 214 (322)
++.+ + ..+.+...... . -.+.+++|+++|+.|.++
T Consensus 93 ~~aG-~--~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~ 143 (302)
T 2ftp_A 93 LESG-V--KEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGY 143 (302)
T ss_dssp HHTT-C--CEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HhCC-c--CEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 8753 3 34443222211 1 157899999999998754
No 125
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=34.25 E-value=2.7e+02 Score=25.32 Aligned_cols=42 Identities=10% Similarity=-0.093 Sum_probs=32.6
Q ss_pred HHHHHHHHHHcCCccEEEecCCCHHHHHHHHhhcCCCCceecee
Q 041428 147 VWREMEKLVKDGLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQME 190 (322)
Q Consensus 147 ~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~ 190 (322)
-++...++++.=.+--|+...++++..+++++.+.. +++++-
T Consensus 307 ~~~~~~~vk~~~~iPvi~~G~i~~~~a~~~l~~g~a--D~V~ig 348 (402)
T 2hsa_B 307 EARLMRTLRNAYQGTFICSGGYTRELGIEAVAQGDA--DLVSYG 348 (402)
T ss_dssp HHHHHHHHHHHCSSCEEEESSCCHHHHHHHHHTTSC--SEEEES
T ss_pred hHHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHCCCC--ceeeec
Confidence 466777788777778899999999999999987654 566553
No 126
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=34.10 E-value=1.6e+02 Score=25.80 Aligned_cols=101 Identities=12% Similarity=-0.016 Sum_probs=60.6
Q ss_pred ChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHc--CCc-cEEEecCCCHH
Q 041428 95 SPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKD--GLV-RDVGVCNFTLK 171 (322)
Q Consensus 95 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~--Gki-r~iGvs~~~~~ 171 (322)
+++.+.+..++-. .-|-+.||+=. ... ..+.++.++.+..+++. ... --|.|-++.++
T Consensus 35 ~~~~a~~~A~~~v-~~GAdiIDIg~--g~~----------------~v~~~eem~rvv~~i~~~~~~~~vpisIDT~~~~ 95 (300)
T 3k13_A 35 KYDEALSIARQQV-EDGALVIDVNM--DDG----------------LLDARTEMTTFLNLIMSEPEIARVPVMIDSSKWE 95 (300)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEEEC--CCT----------------TSCHHHHHHHHHHHHHTCHHHHTSCEEEECSCHH
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECC--CCC----------------CCCHHHHHHHHHHHHHHhhhcCCCeEEEeCCCHH
Confidence 3444444444433 56889999865 111 12334444444444432 011 14889999999
Q ss_pred HHHHHHhhcCCCCceeceeeCCCCCc---HHHHHHHHHcCceEEEecc
Q 041428 172 KLNKLLNFAKTKPSVCQMEMHPGWRN---DKILEACKKNGIHVTAYSP 216 (322)
Q Consensus 172 ~l~~~~~~~~~~~~~~q~~~~~~~~~---~~ll~~~~~~gi~via~~p 216 (322)
.+++.++...-...+|-+ +....+ .++++.++++|..++.+.-
T Consensus 96 V~eaaL~~~~Ga~iINdI--s~~~~d~~~~~~~~l~a~~ga~vV~mh~ 141 (300)
T 3k13_A 96 VIEAGLKCLQGKSIVNSI--SLKEGEEVFLEHARIIKQYGAATVVMAF 141 (300)
T ss_dssp HHHHHHHHCSSCCEEEEE--CSTTCHHHHHHHHHHHHHHTCEEEEESE
T ss_pred HHHHHHHhcCCCCEEEeC--CcccCChhHHHHHHHHHHhCCeEEEEee
Confidence 999999963222344444 334323 3799999999999999764
No 127
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=33.97 E-value=1.9e+02 Score=23.62 Aligned_cols=93 Identities=19% Similarity=0.123 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHhhc-CCCCceeceeeCCCCC-----cHHHHHHHHHcCceEEEeccCC
Q 041428 145 EGVWREMEKLVKDGLVRDVGVCNFTLKKLNKLLNFA-KTKPSVCQMEMHPGWR-----NDKILEACKKNGIHVTAYSPLG 218 (322)
Q Consensus 145 ~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~-~~~~~~~q~~~~~~~~-----~~~ll~~~~~~gi~via~~pl~ 218 (322)
+++++...+-.++.-|++|=|.+.+.+...++++.. +++..++-..+....+ +.+..+..++.|+.|+..+=+-
T Consensus 29 ~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~tH~l 108 (201)
T 1vp8_A 29 EETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEELRKRGAKIVRQSHIL 108 (201)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHHHHTTCEEEECCCTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEEeccc
Confidence 556555444444545999999999988887777764 2223333322222222 2789999999999999866554
Q ss_pred CCCCCCCCCCCHHHHHHHHhcC-CCHHHHH
Q 041428 219 SQGAGRDLIHDPTVERIAKKLN-KSPGQIL 247 (322)
Q Consensus 219 ~~G~l~~~~~~~~l~~la~~~~-~s~~qla 247 (322)
+ | .=+.+..++| .+|.++.
T Consensus 109 s-g---------veR~is~kfGG~~p~eii 128 (201)
T 1vp8_A 109 S-G---------LERSISRKLGGVSRTEAI 128 (201)
T ss_dssp T-T---------THHHHHHHTCCCCHHHHH
T ss_pred c-c---------hhHHHHHhcCCCCHHHHH
Confidence 4 4 2244666774 6777643
No 128
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=33.12 E-value=2.5e+02 Score=24.52 Aligned_cols=64 Identities=9% Similarity=0.152 Sum_probs=45.6
Q ss_pred HHHHHHHHHHc-CCccEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEecc
Q 041428 147 VWREMEKLVKD-GLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSP 216 (322)
Q Consensus 147 ~~~~L~~l~~~-Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~p 216 (322)
+...++.++++ +. -|.|-+++++.++++++.+.. .+ ...+......++++.+++.|..++.+..
T Consensus 103 vvpvI~~l~~~~~v--piSIDT~~~~V~~aAl~aGa~--iI--Ndvsg~~~d~~m~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 103 VVPMIQAVSKEVKL--PISIDTYKAEVAKQAIEAGAH--II--NDIWGAKAEPKIAEVAAHYDVPIILMHN 167 (297)
T ss_dssp HHHHHHHHHHHSCS--CEEEECSCHHHHHHHHHHTCC--EE--EETTTTSSCTHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHhcCCc--eEEEeCCCHHHHHHHHHcCCC--EE--EECCCCCCCHHHHHHHHHhCCcEEEEeC
Confidence 44445666654 43 388999999999999998432 22 3444444457899999999999999765
No 129
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=32.49 E-value=2e+02 Score=24.75 Aligned_cols=113 Identities=16% Similarity=0.154 Sum_probs=66.2
Q ss_pred CcEEEEecCCCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCc
Q 041428 81 KDLFVTSKLWCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLV 160 (322)
Q Consensus 81 ~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gki 160 (322)
..+.|+..+.........+...+.+.+++.+... +-+.+--.+... ......+.+.+..|++.|--
T Consensus 113 ~~~~lsiNls~~~l~~~~~~~~l~~~l~~~~~~~-~~l~lEItE~~~-------------~~~~~~~~~~l~~Lr~~G~~ 178 (294)
T 2r6o_A 113 DDLTLSVNISTRQFEGEHLTRAVDRALARSGLRP-DCLELEITENVM-------------LVMTDEVRTCLDALRARGVR 178 (294)
T ss_dssp TTCCEEEEECGGGGGGGHHHHHHHHHHHHHCCCG-GGEEEEEEGGGG-------------GGCCHHHHHHHHHHHHHTCE
T ss_pred CCeEEEEEeCHHHhCCcHHHHHHHHHHHHcCCCc-CEEEEEEeCCch-------------hhChHHHHHHHHHHHHCCCE
Confidence 3456666665555555677888999999888753 333333222210 02236788899999999973
Q ss_pred ---cEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCC---Cc-------HHHHHHHHHcCceEEE
Q 041428 161 ---RDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGW---RN-------DKILEACKKNGIHVTA 213 (322)
Q Consensus 161 ---r~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~---~~-------~~ll~~~~~~gi~via 213 (322)
..+|....+...+. . .+++.+-+.-+... .. ..++..|++.|+.|+|
T Consensus 179 ialDDFGtG~ssl~~L~---~---l~~d~iKID~sfv~~i~~~~~~~~iv~~ii~la~~lg~~vvA 238 (294)
T 2r6o_A 179 LALDDFGTGYSSLSYLS---Q---LPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLGMEVVA 238 (294)
T ss_dssp EEEEEETSSCBCHHHHH---H---SCCCEEEECHHHHTTTTTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEECCCCCchhHHHHH---h---CCCCEEEECHHHHhhhhcChHHHHHHHHHHHHHHHCCCEEEE
Confidence 33343333333332 2 23444444322211 11 5689999999999998
No 130
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=31.72 E-value=2.8e+02 Score=24.74 Aligned_cols=147 Identities=17% Similarity=0.175 Sum_probs=86.0
Q ss_pred hHHHHHHHHHHHcCCCeEecCC-CcC-C-HH--HHHHHHHHHHhcCCCCCcEEEEecCCCCCCC-hHHHHHHHHHHHHHh
Q 041428 37 EAFKSVFTAIVEGGYRHIDTAK-QYG-V-QE--NIGLALKEAMQTGIQRKDLFVTSKLWCADLS-PDRVRSALNNTLQEL 110 (322)
Q Consensus 37 ~~~~~~l~~Al~~Gi~~~DTA~-~Yg-~-e~--~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~-~~~i~~~~~~SL~~L 110 (322)
++..+..+.+++.|++.|..=- .+| + +. ..=+++|+.+ .+++-|..... ..++ .+...+ +-+.|+.+
T Consensus 148 e~~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~-----g~~~~l~vDan-~~~~d~~~A~~-~~~~l~~~ 220 (374)
T 3sjn_A 148 EDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAA-----GPEMEVQIDLA-SKWHTCGHSAM-MAKRLEEF 220 (374)
T ss_dssp GGGHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHH-----CSSSEEEEECT-TTTCSHHHHHH-HHHHSGGG
T ss_pred HHHHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHh-----CCCCeEEEECC-CCCCCHHHHHH-HHHHhhhc
Confidence 6667778889999999988532 232 2 11 1224455442 23455555552 2333 333222 22334444
Q ss_pred CCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEE-EecCCCHHHHHHHHhhcCCCCceece
Q 041428 111 QLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDV-GVCNFTLKKLNKLLNFAKTKPSVCQM 189 (322)
Q Consensus 111 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~i-Gvs~~~~~~l~~~~~~~~~~~~~~q~ 189 (322)
+ +.++..|-+. +-++.+.++++.-.|-=. |=+-++.+.+.++++.... +++|+
T Consensus 221 ~-----i~~iEqP~~~-------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~--d~v~~ 274 (374)
T 3sjn_A 221 N-----LNWIEEPVLA-------------------DSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNA--DIVQP 274 (374)
T ss_dssp C-----CSEEECSSCT-------------------TCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCC--SEECC
T ss_pred C-----ceEEECCCCc-------------------ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCC--CEEEe
Confidence 4 4455555331 235667778776555433 3344567888888877554 77887
Q ss_pred eeCCCCC---cHHHHHHHHHcCceEEEecc
Q 041428 190 EMHPGWR---NDKILEACKKNGIHVTAYSP 216 (322)
Q Consensus 190 ~~~~~~~---~~~ll~~~~~~gi~via~~p 216 (322)
.....-. ...+..+|+++|+.++.++.
T Consensus 275 k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 304 (374)
T 3sjn_A 275 DITRCGGITEMKKIYDIAQMNGTQLIPHGF 304 (374)
T ss_dssp BTTTSSHHHHHHHHHHHHHHHTCEECCBCC
T ss_pred CccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 7655432 26799999999999988765
No 131
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=31.61 E-value=3e+02 Score=25.00 Aligned_cols=153 Identities=12% Similarity=0.071 Sum_probs=89.5
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCCCcCCH--HHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhC
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAKQYGVQ--ENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQ 111 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e--~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg 111 (322)
.+.++..+....+.+.|++.|=.-...+.+ ...=+++++.+ .+++-|..-.. ..++++... +.++.|
T Consensus 187 ~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~v~~vR~~~-----g~~~~l~vDaN-~~~~~~~A~----~~~~~l- 255 (412)
T 4h1z_A 187 DTRAKRAELAAAWQAKGFSSFKFASPVADDGVAKEMEILRERL-----GPAVRIACDMH-WAHTASEAV----ALIKAM- 255 (412)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHHHHHHHHH-----CSSSEEEEECC-SCCCHHHHH----HHHHHH-
T ss_pred CcHHHHHHHHHHHHhcCcceeccccccchhhHHHHHHHHHhcc-----CCeEEEEeccc-cCCCHHHHH----HHHHhh-
Confidence 445666777788889999988654333322 11224555542 23333333321 234444332 223333
Q ss_pred CCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHhhcCCCCceecee
Q 041428 112 LDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVR-DVGVCNFTLKKLNKLLNFAKTKPSVCQME 190 (322)
Q Consensus 112 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~ 190 (322)
+..++.++-.|-+. +-++.+.+|++.-.+. ..|=+-++...+.++++.... +++|..
T Consensus 256 -~~~~l~~iEqP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~--div~~d 313 (412)
T 4h1z_A 256 -EPHGLWFAEAPVRT-------------------EDIDGLARVAASVSTAIAVGEEWRTVHDMVPRVARRAL--AIVQPE 313 (412)
T ss_dssp -GGGCEEEEECCSCT-------------------TCHHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCC--SEECCC
T ss_pred -cccccceecCCCCc-------------------cchHHHHHHHhhcCCccccCCcccchHhHHHHHHcCCC--CEEEec
Confidence 23567788777542 2245577777765542 344566788888888877554 677776
Q ss_pred eCC--CCCcHHHHHHHHHcCceEEEeccCCC
Q 041428 191 MHP--GWRNDKILEACKKNGIHVTAYSPLGS 219 (322)
Q Consensus 191 ~~~--~~~~~~ll~~~~~~gi~via~~pl~~ 219 (322)
..- +.....+...|+.+|+.++.++.+++
T Consensus 314 ~~~GGit~~~kia~~A~~~gi~v~~h~~~~~ 344 (412)
T 4h1z_A 314 MGHKGITQFMRIGAYAHVHHIKVIPHATIGA 344 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCCSSC
T ss_pred CCCCChHHHHHHHHHHHHCCCcEEecCCcch
Confidence 431 11115688899999999998887765
No 132
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=31.52 E-value=2.8e+02 Score=24.67 Aligned_cols=154 Identities=12% Similarity=0.108 Sum_probs=91.5
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCCCcC---CHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHh
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAKQYG---VQENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQEL 110 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~L 110 (322)
.+.++..+.++.+++.|++.|=.=-.-. .+...=+++++. ++.-++.|=.. ..++++.. .+-+++|
T Consensus 142 ~~~e~~~~~a~~~~~~G~~~iK~Kvg~~~~~~d~~~v~avr~~----~~~~~l~vDaN---~~~~~~~A----~~~~~~L 210 (365)
T 3ik4_A 142 GDEVHAAASAKAILARGIKSIKVKTAGVDVAYDLARLRAIHQA----APTAPLIVDGN---CGYDVERA----LAFCAAC 210 (365)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECCSSCHHHHHHHHHHHHHH----SSSCCEEEECT---TCCCHHHH----HHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHHHHHh----CCCCeEEEECC---CCCCHHHH----HHHHHHH
Confidence 4567777778888999999876422111 122223445554 22223433322 23444433 2334555
Q ss_pred CCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHhhcCCCCceece
Q 041428 111 QLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVR-DVGVCNFTLKKLNKLLNFAKTKPSVCQM 189 (322)
Q Consensus 111 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~ 189 (322)
..+..++.++..|-+. +-++.+.+|+++-.+. ..|=+-++...+.++++.... +++|+
T Consensus 211 ~~~~~~i~~iEeP~~~-------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~--d~v~i 269 (365)
T 3ik4_A 211 KAESIPMVLFEQPLPR-------------------EDWAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTA--SVINI 269 (365)
T ss_dssp HHTTCCEEEEECCSCT-------------------TCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCC--SEEEE
T ss_pred hhCCCCceEEECCCCc-------------------ccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCC--CEEEE
Confidence 2134578888877542 2245677777654443 445566788888888877554 77787
Q ss_pred eeCC--CCCcHHHHHHHHHcCceEEEeccCCC
Q 041428 190 EMHP--GWRNDKILEACKKNGIHVTAYSPLGS 219 (322)
Q Consensus 190 ~~~~--~~~~~~ll~~~~~~gi~via~~pl~~ 219 (322)
.... +.....+..+|+++|+.++..+.+.+
T Consensus 270 k~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 301 (365)
T 3ik4_A 270 KLMKAGVAEGLKMIAIAQAAGLGLMIGGMVES 301 (365)
T ss_dssp CHHHHCHHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred cCCccCHHHHHHHHHHHHHcCCeEEecCCccc
Confidence 7654 11126789999999999999877644
No 133
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=31.43 E-value=23 Score=33.48 Aligned_cols=22 Identities=14% Similarity=0.036 Sum_probs=19.4
Q ss_pred hHHHHHHHHHHHcCCCeEecCC
Q 041428 37 EAFKSVFTAIVEGGYRHIDTAK 58 (322)
Q Consensus 37 ~~~~~~l~~Al~~Gi~~~DTA~ 58 (322)
.....++++|+++|+++||||.
T Consensus 94 ~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 94 ISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp SCHHHHHHHHHHHTCEEEESSC
T ss_pred ccCHHHHHHHHHcCCCEEECCC
Confidence 3557899999999999999994
No 134
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=31.20 E-value=2.5e+02 Score=24.02 Aligned_cols=99 Identities=10% Similarity=0.036 Sum_probs=63.6
Q ss_pred ChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHc-CCccEEEecCCCHHHH
Q 041428 95 SPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKD-GLVRDVGVCNFTLKKL 173 (322)
Q Consensus 95 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~-Gkir~iGvs~~~~~~l 173 (322)
+.+.+.+..++-. .-|-+.||+-.--.. ....+.+...++.+++. +. -|.|-+++++.+
T Consensus 32 ~~~~a~~~a~~~v-~~GAdiIDIg~~s~~-----------------~eE~~rv~~vi~~l~~~~~~--pisIDT~~~~v~ 91 (271)
T 2yci_X 32 DPRPIQEWARRQA-EKGAHYLDVNTGPTA-----------------DDPVRVMEWLVKTIQEVVDL--PCCLDSTNPDAI 91 (271)
T ss_dssp CCHHHHHHHHHHH-HTTCSEEEEECCSCS-----------------SCHHHHHHHHHHHHHHHCCC--CEEEECSCHHHH
T ss_pred CHHHHHHHHHHHH-HCCCCEEEEcCCcCc-----------------hhHHHHHHHHHHHHHHhCCC--eEEEeCCCHHHH
Confidence 3455555554444 678888887542211 02345666666666665 32 388999999999
Q ss_pred HHHHhhcCCCCceeceeeCCCCCc--HHHHHHHHHcCceEEEecc
Q 041428 174 NKLLNFAKTKPSVCQMEMHPGWRN--DKILEACKKNGIHVTAYSP 216 (322)
Q Consensus 174 ~~~~~~~~~~~~~~q~~~~~~~~~--~~ll~~~~~~gi~via~~p 216 (322)
+++++...-...+|-+ +... . .++++.++++|..++.+..
T Consensus 92 ~aal~a~~Ga~iINdv--s~~~-d~~~~~~~~~a~~~~~vv~m~~ 133 (271)
T 2yci_X 92 EAGLKVHRGHAMINST--SADQ-WKMDIFFPMAKKYEAAIIGLTM 133 (271)
T ss_dssp HHHHHHCCSCCEEEEE--CSCH-HHHHHHHHHHHHHTCEEEEESC
T ss_pred HHHHHhCCCCCEEEEC--CCCc-cccHHHHHHHHHcCCCEEEEec
Confidence 9999984322233333 3332 3 6799999999999999875
No 135
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=31.13 E-value=2.8e+02 Score=24.60 Aligned_cols=144 Identities=18% Similarity=0.149 Sum_probs=72.7
Q ss_pred hhHHHHHHHHHHHcCCCeEecCCCcC--C---HHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHh
Q 041428 36 DEAFKSVFTAIVEGGYRHIDTAKQYG--V---QENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQEL 110 (322)
Q Consensus 36 ~~~~~~~l~~Al~~Gi~~~DTA~~Yg--~---e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~L 110 (322)
..++.+.+..+++.+.. .|+ . .+.+.+++.+........+++++++= ..++++..++.+
T Consensus 76 ~~~v~~a~~~~~~~~~~------~y~~~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g----------~~ea~~~a~~~~ 139 (421)
T 3l8a_A 76 VPEIKEAIINYGREHIF------GYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDG----------VVPAISIALQAF 139 (421)
T ss_dssp CHHHHHHHHHHHHHCCS------SCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESC----------HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCc------CCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEcCC----------HHHHHHHHHHHh
Confidence 46677888888887642 333 1 23344444433211145666766532 233444444444
Q ss_pred CCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEec------CCCHHHHHHHHhhcCCCC
Q 041428 111 QLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVC------NFTLKKLNKLLNFAKTKP 184 (322)
Q Consensus 111 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs------~~~~~~l~~~~~~~~~~~ 184 (322)
+..=|-+++..|... .....+..+ .+++..+-+. ..+.+.+++.++....+.
T Consensus 140 -~~~gd~Vi~~~~~y~-------------------~~~~~~~~~--g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~ 197 (421)
T 3l8a_A 140 -SEKGDAVLINSPVYY-------------------PFARTIRLN--DHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKI 197 (421)
T ss_dssp -SCTEEEEEEEESCCH-------------------HHHHHHHHT--TEEEEEEECEEETTEEECCHHHHHHHHHHTTEEE
T ss_pred -cCCCCEEEECCCCcH-------------------HHHHHHHHC--CCEEEeccccccCCCeeeCHHHHHHHhhccCCeE
Confidence 233366666655432 222222221 2234444442 147788888876333322
Q ss_pred ceeceeeCCCC---Cc---HHHHHHHHHcCceEEEeccC
Q 041428 185 SVCQMEMHPGW---RN---DKILEACKKNGIHVTAYSPL 217 (322)
Q Consensus 185 ~~~q~~~~~~~---~~---~~ll~~~~~~gi~via~~pl 217 (322)
.++..+-|+.- .. .++.+.|+++|+-++.=...
T Consensus 198 vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~ 236 (421)
T 3l8a_A 198 YLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIH 236 (421)
T ss_dssp EEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred EEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccc
Confidence 23222233321 11 67889999999999884443
No 136
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=30.27 E-value=2.8e+02 Score=24.85 Aligned_cols=133 Identities=12% Similarity=0.089 Sum_probs=74.3
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCCCcCCHHHHH-----------------HHHHHHHhcCCCCCcEEEEecCCCCCCCh
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAKQYGVQENIG-----------------LALKEAMQTGIQRKDLFVTSKLWCADLSP 96 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~lG-----------------~~l~~~~~~~~~R~~~~i~tK~~~~~~~~ 96 (322)
++.+....+.++|-+.|+.+|=|.-...+-..+- ..|+.. +.....++++|=. .+-
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~st~fD~~svd~l~~~~v~~~KI~S~~~~N~pLL~~v---a~~gKPviLstGm----stl 147 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAICTPFDEESVDLIEAHGIEIIKIASCSFTDWPLLERI---ARSDKPVVASTAG----ARR 147 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCCEEEECSSSTTCHHHHHHH---HTSCSCEEEECTT----CCH
T ss_pred CCHHHHHHHHHHHHHcCCcEEeccCCHHHHHHHHHcCCCEEEECcccccCHHHHHHH---HhhCCcEEEECCC----CCH
Confidence 6778888888899999999886654422111111 112222 1134556666654 267
Q ss_pred HHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcC-CccEEEecCCCHH----
Q 041428 97 DRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDG-LVRDVGVCNFTLK---- 171 (322)
Q Consensus 97 ~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~G-kir~iGvs~~~~~---- 171 (322)
+.+..+++-..+. |. ++.++|+...+... ...--+.++..|++.= .+ -||.|+|+..
T Consensus 148 ~Ei~~Ave~i~~~-g~---~viLlhC~s~YPt~-------------~~~~nL~aI~~Lk~~fp~l-pVG~SdHt~g~~~~ 209 (350)
T 3g8r_A 148 EDIDKVVSFMLHR-GK---DLTIMHCVAEYPTP-------------DDHLHLARIKTLRQQYAGV-RIGYSTHEDPDLME 209 (350)
T ss_dssp HHHHHHHHHHHTT-TC---CEEEEECCCCSSCC-------------GGGCCTTHHHHHHHHCTTS-EEEEEECCCSSCCH
T ss_pred HHHHHHHHHHHHc-CC---CEEEEecCCCCCCC-------------cccCCHHHHHHHHHHCCCC-CEEcCCCCCCCccH
Confidence 8888888876654 42 79999986543210 0011133455555431 22 3899999742
Q ss_pred HHHHHHhhcCCCCceeceeeCCC
Q 041428 172 KLNKLLNFAKTKPSVCQMEMHPG 194 (322)
Q Consensus 172 ~l~~~~~~~~~~~~~~q~~~~~~ 194 (322)
....++..+. .++...+++-
T Consensus 210 ~~~AAvAlGA---~vIEkH~tld 229 (350)
T 3g8r_A 210 PIMLAVAQGA---TVFEKHVGLP 229 (350)
T ss_dssp HHHHHHHTTC---CEEEEEBCCC
T ss_pred HHHHHHHcCC---CEEEEecCcc
Confidence 2234444443 3666666554
No 137
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=30.20 E-value=2e+02 Score=25.27 Aligned_cols=122 Identities=11% Similarity=0.164 Sum_probs=69.9
Q ss_pred ccHHHHHHHHHHHHHcCCccEEEecC-CCH------HHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEe
Q 041428 142 FDMEGVWREMEKLVKDGLVRDVGVCN-FTL------KKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAY 214 (322)
Q Consensus 142 ~~~~~~~~~L~~l~~~Gkir~iGvs~-~~~------~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~ 214 (322)
.+.+++.+.++++++.| ++.|.+++ -++ +.+.++++....... +.+..++.....+.+...++.|+..+..
T Consensus 91 ls~eei~~~~~~~~~~G-~~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~-i~i~~s~g~~~~e~l~~L~~aG~~~i~i 168 (350)
T 3t7v_A 91 LTMEEIKETCKTLKGAG-FHMVDLTMGEDPYYYEDPNRFVELVQIVKEELG-LPIMISPGLMDNATLLKAREKGANFLAL 168 (350)
T ss_dssp CCHHHHHHHHHHHTTSC-CSEEEEEECCCHHHHHSTHHHHHHHHHHHHHHC-SCEEEECSSCCHHHHHHHHHTTEEEEEC
T ss_pred CCHHHHHHHHHHHHHCC-CCEEEEeeCCCCccccCHHHHHHHHHHHHhhcC-ceEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 46789999999998887 56665533 223 233444333210000 2334555555688999999999887664
Q ss_pred ccCCCCCCCCCCCCCHHHHHHHHhcCCCHHHHHHHHhhhcC----CEEecCC-CCHHHHHHhHh
Q 041428 215 SPLGSQGAGRDLIHDPTVERIAKKLNKSPGQILLKWGIHRG----TSVIPKS-THPDRIKENIK 273 (322)
Q Consensus 215 ~pl~~~G~l~~~~~~~~l~~la~~~~~s~~qlal~~~l~~~----~~~i~g~-~~~~~l~~nl~ 273 (322)
+ + +-...+.++.+..++...-.--+++++...| ...++|. .+.+++.+.+.
T Consensus 169 ~-l-------Et~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~e~~~~~l~ 224 (350)
T 3t7v_A 169 Y-Q-------ETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVEDGILTGVGNDIESTILSLR 224 (350)
T ss_dssp C-C-------BCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEEEESSSCCHHHHHHHHH
T ss_pred e-e-------ecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEccceEeecCCCHHHHHHHHH
Confidence 2 2 2334556666655332222233566666656 4557776 56666665544
No 138
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=29.85 E-value=3.3e+02 Score=26.79 Aligned_cols=35 Identities=9% Similarity=0.045 Sum_probs=23.0
Q ss_pred HHHHHHHHHcCCccEEEecCC-CHHHHHHHHhhcCC
Q 041428 148 WREMEKLVKDGLVRDVGVCNF-TLKKLNKLLNFAKT 182 (322)
Q Consensus 148 ~~~L~~l~~~Gkir~iGvs~~-~~~~l~~~~~~~~~ 182 (322)
++...++++.=++--|++..+ +++..+++++.+..
T Consensus 280 ~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~a 315 (729)
T 1o94_A 280 IPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYA 315 (729)
T ss_dssp HHHHHHHHTTCSSCEECCSCCCCHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHCCCC
Confidence 344556666656777777777 57777777776543
No 139
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=29.73 E-value=2.2e+02 Score=25.64 Aligned_cols=89 Identities=15% Similarity=0.194 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCCHHHHHH
Q 041428 96 PDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFTLKKLNK 175 (322)
Q Consensus 96 ~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~ 175 (322)
.+...+++. .|.+-|.|-|++-. +..+..+++.++++.=.+=-++=-.|++..+.+
T Consensus 45 ~~atv~Qi~-~l~~aG~diVRvav-----------------------p~~~~a~al~~I~~~~~vPlvaDiHf~~~lal~ 100 (366)
T 3noy_A 45 VEATLNQIK-RLYEAGCEIVRVAV-----------------------PHKEDVEALEEIVKKSPMPVIADIHFAPSYAFL 100 (366)
T ss_dssp HHHHHHHHH-HHHHTTCCEEEEEC-----------------------CSHHHHHHHHHHHHHCSSCEEEECCSCHHHHHH
T ss_pred HHHHHHHHH-HHHHcCCCEEEeCC-----------------------CChHHHHHHHHHHhcCCCCEEEeCCCCHHHHHH
Confidence 334444443 35677887777732 235667889999888655556656788888888
Q ss_pred HHhhcCCCCceeceeeCCCCC---c--HHHHHHHHHcCceEEE
Q 041428 176 LLNFAKTKPSVCQMEMHPGWR---N--DKILEACKKNGIHVTA 213 (322)
Q Consensus 176 ~~~~~~~~~~~~q~~~~~~~~---~--~~ll~~~~~~gi~via 213 (322)
+++.+-. . ++.||.+- . .++++.|+++|+++-.
T Consensus 101 a~e~G~d---k--lRINPGNig~~~~~~~vv~~ak~~~~piRI 138 (366)
T 3noy_A 101 SMEKGVH---G--IRINPGNIGKEEIVREIVEEAKRRGVAVRI 138 (366)
T ss_dssp HHHTTCS---E--EEECHHHHSCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHhCCC---e--EEECCcccCchhHHHHHHHHHHHcCCCEEE
Confidence 7776432 2 44444332 1 6899999999998755
No 140
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=29.71 E-value=2.9e+02 Score=24.38 Aligned_cols=94 Identities=17% Similarity=0.086 Sum_probs=47.6
Q ss_pred CcEEEEecCCCC-----CCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHH
Q 041428 81 KDLFVTSKLWCA-----DLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLV 155 (322)
Q Consensus 81 ~~~~i~tK~~~~-----~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~ 155 (322)
+++-|..|+... ..+.+.. ..+-+.|+..|+|||++ |.......... + ......++.+.+++
T Consensus 218 ~d~pV~vRls~~~~~~~g~~~~~~-~~la~~L~~~Gvd~i~v---s~g~~~~~~~~-~--------~~~~~~~~~~~~ir 284 (349)
T 3hgj_A 218 RELPLFVRVSATDWGEGGWSLEDT-LAFARRLKELGVDLLDC---SSGGVVLRVRI-P--------LAPGFQVPFADAVR 284 (349)
T ss_dssp TTSCEEEEEESCCCSTTSCCHHHH-HHHHHHHHHTTCCEEEE---ECCCSCSSSCC-C--------CCTTTTHHHHHHHH
T ss_pred CCceEEEEeccccccCCCCCHHHH-HHHHHHHHHcCCCEEEE---ecCCcCccccc-C--------CCccccHHHHHHHH
Confidence 345577777433 2344433 34556677778666554 43111100000 0 00011234455555
Q ss_pred HcCCccEEEecCC-CHHHHHHHHhhcCCCCceece
Q 041428 156 KDGLVRDVGVCNF-TLKKLNKLLNFAKTKPSVCQM 189 (322)
Q Consensus 156 ~~Gkir~iGvs~~-~~~~l~~~~~~~~~~~~~~q~ 189 (322)
+.-.+--+++... +++..+++++.+.. +++++
T Consensus 285 ~~~~iPVi~~Ggi~t~e~a~~~l~~G~a--D~V~i 317 (349)
T 3hgj_A 285 KRVGLRTGAVGLITTPEQAETLLQAGSA--DLVLL 317 (349)
T ss_dssp HHHCCEEEECSSCCCHHHHHHHHHTTSC--SEEEE
T ss_pred HHcCceEEEECCCCCHHHHHHHHHCCCc--eEEEe
Confidence 5445666777765 68888888887644 55555
No 141
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=29.56 E-value=1.4e+02 Score=26.99 Aligned_cols=64 Identities=13% Similarity=-0.059 Sum_probs=43.5
Q ss_pred HHHHHHHHHc-----CCccEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCCc---HHHHHHHHHcCceEEEe
Q 041428 148 WREMEKLVKD-----GLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWRN---DKILEACKKNGIHVTAY 214 (322)
Q Consensus 148 ~~~L~~l~~~-----Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~---~~ll~~~~~~gi~via~ 214 (322)
++.+.++++. -.|-=.+---++++.++++++.... +++|+..+.. .- ..+..+|+++|+.++.+
T Consensus 240 ~~~~~~l~~~l~~~g~~iPIa~dE~~~~~~~~~~i~~~~~--d~v~ik~~~~-Git~~~~i~~~A~~~gi~~~~h 311 (392)
T 3p3b_A 240 EALYEDLKEWLGQRGQNVLIADGEGLASPHLIEWATRGRV--DVLQYDIIWP-GFTHWMELGEKLDAHGLRSAPH 311 (392)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHHHHHTTSC--CEECCBTTTB-CHHHHHHHHHHHHHTTCEECCB
T ss_pred HHHHHHHHHhhccCCCCccEEecCCCCHHHHHHHHHcCCC--CEEEeCcccc-CHHHHHHHHHHHHHcCCEEEec
Confidence 4456666665 3443333224567888888876554 7888877665 32 67999999999999886
No 142
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=29.41 E-value=1.8e+02 Score=25.21 Aligned_cols=21 Identities=14% Similarity=0.275 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHcCCccEEEec
Q 041428 146 GVWREMEKLVKDGLVRDVGVC 166 (322)
Q Consensus 146 ~~~~~L~~l~~~Gkir~iGvs 166 (322)
.+.++|.+.+++|++-.+|.|
T Consensus 132 ~l~~~L~~~~~~G~~~~~GtS 152 (291)
T 3en0_A 132 PLMDRIRQRVHNGEISLAGTS 152 (291)
T ss_dssp HHHHHHHHHHHTTSSEEEEET
T ss_pred CHHHHHHHHHHCCCeEEEEeC
Confidence 566889999999977788987
No 143
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=29.11 E-value=2.3e+02 Score=26.15 Aligned_cols=94 Identities=11% Similarity=0.088 Sum_probs=61.6
Q ss_pred ChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecC--CCHHH
Q 041428 95 SPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCN--FTLKK 172 (322)
Q Consensus 95 ~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~--~~~~~ 172 (322)
+++.+...+.+.++. .+++++-.|-+. +-|+.+.+|.+..+|-=.|=-. .++..
T Consensus 274 t~~eai~~~~~~l~~-----y~i~~iEdPl~~-------------------dD~~g~~~l~~~~~ipI~gDE~~vt~~~~ 329 (436)
T 2al1_A 274 TGPQLADLYHSLMKR-----YPIVSIEDPFAE-------------------DDWEAWSHFFKTAGIQIVADDLTVTNPKR 329 (436)
T ss_dssp CHHHHHHHHHHHHHH-----SCEEEEECCSCT-------------------TCHHHHHHHHTTCCSEEEESTTTTTCHHH
T ss_pred CHHHHHHHHHHHHHh-----CCcEEEECCCCC-------------------cCHHHHHHHHhcCCCeEEECCcccCCHHH
Confidence 444444455555554 457788877542 3367778888887776665444 36899
Q ss_pred HHHHHhhcCCCCceeceeeCCCC---CcHHHHHHHHHcCceEEEe
Q 041428 173 LNKLLNFAKTKPSVCQMEMHPGW---RNDKILEACKKNGIHVTAY 214 (322)
Q Consensus 173 l~~~~~~~~~~~~~~q~~~~~~~---~~~~ll~~~~~~gi~via~ 214 (322)
+.++++.... +++|+..+-.- ...++..+|+++|+.++..
T Consensus 330 ~~~~i~~~a~--d~i~ikv~qiGGitea~~ia~lA~~~g~~~~~s 372 (436)
T 2al1_A 330 IATAIEKKAA--DALLLKVNQIGTLSESIKAAQDSFAAGWGVMVS 372 (436)
T ss_dssp HHHHHHTTCC--SEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHhCCC--CEEEechhhcCCHHHHHHHHHHHHHcCCeEEEe
Confidence 9999887554 66666553321 2267999999999997663
No 144
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=28.83 E-value=3.3e+02 Score=24.68 Aligned_cols=151 Identities=13% Similarity=0.164 Sum_probs=88.2
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCCC-cC-------------------CHHHHH------HHHHHHHhcCCCCCcEEEEe
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAKQ-YG-------------------VQENIG------LALKEAMQTGIQRKDLFVTS 87 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~~-Yg-------------------~e~~lG------~~l~~~~~~~~~R~~~~i~t 87 (322)
.+.++..+..+.+++.|++.|=.--. ++ ....+. +++++.+ .+++.|..
T Consensus 152 ~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~-----G~~~~l~v 226 (421)
T 4hnl_A 152 DNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKY-----GNQFQMLH 226 (421)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHH-----TTSSEEEE
T ss_pred CCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHh-----CCCceEec
Confidence 35577778888899999998753211 00 011122 2344332 23444544
Q ss_pred cCCCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCcc-EEEec
Q 041428 88 KLWCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVR-DVGVC 166 (322)
Q Consensus 88 K~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs 166 (322)
-.. ..++.+...+ .++.| +..+++++-.|-+. +-++.+.+|++.-.|. ..|=+
T Consensus 227 Dan-~~~~~~~A~~----~~~~l--~~~~i~~iEeP~~~-------------------~d~~~~~~l~~~~~ipIa~dE~ 280 (421)
T 4hnl_A 227 DVH-ERLHPNQAIQ----FAKAA--EPYQLFFLEDILPP-------------------DQSHWLTQLRSQSATPIATGEL 280 (421)
T ss_dssp ECT-TCSCHHHHHH----HHHHH--GGGCCSEEECCSCG-------------------GGGGGHHHHHTTCCCCEEECTT
T ss_pred ccc-ccCCHHHHHH----HHHHh--hhhhhcccccCCcc-------------------cchHHHHHHHhcCCCCeecCcc
Confidence 442 2344444332 23333 23566777766442 2345577777765543 34556
Q ss_pred CCCHHHHHHHHhhcCCCCceeceeeCCCCC---cHHHHHHHHHcCceEEEeccC
Q 041428 167 NFTLKKLNKLLNFAKTKPSVCQMEMHPGWR---NDKILEACKKNGIHVTAYSPL 217 (322)
Q Consensus 167 ~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~---~~~ll~~~~~~gi~via~~pl 217 (322)
-++...+.++++.... +++|+..+-.-. ...+..+|+++|+.+..++..
T Consensus 281 ~~~~~~~~~~i~~~a~--d~v~~d~~~~GGite~~~ia~~A~~~gi~v~~h~~~ 332 (421)
T 4hnl_A 281 FNNPMEWQELVKNRQI--DFMRAHVSQIGGITPALKLAHFCDAMGVRIAWHTPS 332 (421)
T ss_dssp CCSGGGTHHHHHTTCC--SEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred eehhHHHHHHHhcCCc--eEEEeCCCCCCCHHHHHHHHHHHHHCCCeEEEeCCc
Confidence 6778889999887554 777776544322 267899999999999877654
No 145
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=28.70 E-value=4.1e+02 Score=25.68 Aligned_cols=74 Identities=15% Similarity=0.225 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHcCCCeEec--C-----------------CCcC-C-H---HHHH---HHHHHHHhcCCCCCcEEEEecCC
Q 041428 38 AFKSVFTAIVEGGYRHIDT--A-----------------KQYG-V-Q---ENIG---LALKEAMQTGIQRKDLFVTSKLW 90 (322)
Q Consensus 38 ~~~~~l~~Al~~Gi~~~DT--A-----------------~~Yg-~-e---~~lG---~~l~~~~~~~~~R~~~~i~tK~~ 90 (322)
+..+.-+.|.++|+..++. | +.|| + | +.+- +++++.+ .+++.|..|+.
T Consensus 142 ~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~v-----G~~~~v~vrls 216 (671)
T 1ps9_A 142 NFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERV-----GNDFIIIYRLS 216 (671)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH-----CSSSEEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHc-----CCCceEEEEEC
Confidence 3344556778899999885 2 2355 2 1 1122 2333331 34566777774
Q ss_pred CC-----CCChHHHHHHHHHHHHHhCCCccce
Q 041428 91 CA-----DLSPDRVRSALNNTLQELQLDYLDL 117 (322)
Q Consensus 91 ~~-----~~~~~~i~~~~~~SL~~Lg~d~iDl 117 (322)
.. ..+.+.. ..+-+.|+..|.|||++
T Consensus 217 ~~~~~~~g~~~~~~-~~~a~~l~~~g~d~i~v 247 (671)
T 1ps9_A 217 MLDLVEDGGTFAET-VELAQAIEAAGATIINT 247 (671)
T ss_dssp EECCSTTCCCHHHH-HHHHHHHHHHTCSEEEE
T ss_pred ccccCCCCCCHHHH-HHHHHHHHhcCCCEEEc
Confidence 22 2344433 34456678889777764
No 146
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=28.61 E-value=3.3e+02 Score=24.56 Aligned_cols=151 Identities=13% Similarity=0.171 Sum_probs=88.2
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCC-CcC-------------------C----H--HHHHHHHHHHHhcCCCCCcEEEEe
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAK-QYG-------------------V----Q--ENIGLALKEAMQTGIQRKDLFVTS 87 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~-~Yg-------------------~----e--~~lG~~l~~~~~~~~~R~~~~i~t 87 (322)
.+.++..+.++.+++.|++.|-.=- .++ . + ..+=+++|+.+ .+++-|..
T Consensus 132 ~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~-----G~d~~l~v 206 (401)
T 3sbf_A 132 DTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKY-----GNQFHILH 206 (401)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHH-----TTSSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHc-----CCCCEEEE
Confidence 4567778888899999999887311 011 0 1 11224455442 23455555
Q ss_pred cCCCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEE-Eec
Q 041428 88 KLWCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDV-GVC 166 (322)
Q Consensus 88 K~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~i-Gvs 166 (322)
... ..++.+...+ +-+.|+.+++ .++..|-+. +-++.+.++++.-.|--. |=+
T Consensus 207 Dan-~~~~~~~A~~-~~~~L~~~~i-----~~iEqP~~~-------------------~~~~~~~~l~~~~~iPIa~dE~ 260 (401)
T 3sbf_A 207 DVH-ERLFPNQAIQ-FAKEVEQYKP-----YFIEDILPP-------------------NQTEWLDNIRSQSSVSLGLGEL 260 (401)
T ss_dssp ECT-TCSCHHHHHH-HHHHHGGGCC-----SCEECSSCT-------------------TCGGGHHHHHTTCCCCEEECTT
T ss_pred ECC-CCCCHHHHHH-HHHHHHhcCC-----CEEECCCCh-------------------hHHHHHHHHHhhCCCCEEeCCc
Confidence 653 2344443322 2234555554 444555331 123457777776555433 334
Q ss_pred CCCHHHHHHHHhhcCCCCceeceeeCCCCC---cHHHHHHHHHcCceEEEeccC
Q 041428 167 NFTLKKLNKLLNFAKTKPSVCQMEMHPGWR---NDKILEACKKNGIHVTAYSPL 217 (322)
Q Consensus 167 ~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~---~~~ll~~~~~~gi~via~~pl 217 (322)
-++...+.++++.... +++|+.....-. ...+..+|+.+|+.++.++..
T Consensus 261 ~~~~~~~~~~i~~~~~--d~v~~k~~~~GGit~~~kia~~A~~~gi~~~~h~~~ 312 (401)
T 3sbf_A 261 FNNPEEWKSLIANRRI--DFIRCHVSQIGGITPALKLGHLCQNFGVRIAWHCAP 312 (401)
T ss_dssp CCSHHHHHHHHHTTCC--SEECCCGGGGTSHHHHHHHHHHHHHHTCEECCCCCT
T ss_pred cCCHHHHHHHHhcCCC--CEEecCccccCCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 5678899999887554 777876654322 267999999999999887764
No 147
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=27.65 E-value=41 Score=23.23 Aligned_cols=58 Identities=19% Similarity=0.289 Sum_probs=37.5
Q ss_pred HHHHHHcCCccEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEec
Q 041428 151 MEKLVKDGLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYS 215 (322)
Q Consensus 151 L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~ 215 (322)
++++++.|++. .| ..+..++++.......++--+.++ +....+..+|+++||+++-+.
T Consensus 3 ~~~~~kagk~~-~G-----~~~v~kai~~gkaklViiA~D~~~-~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 3 YDKVSQAKSII-IG-----TKQTVKALKRGSVKEVVVAKDADP-ILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHHHHCSEEE-ES-----HHHHHHHHTTTCEEEEEEETTSCH-HHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHcCCee-Ec-----HHHHHHHHHcCCeeEEEEeCCCCH-HHHHHHHHHHHHcCCCEEEEC
Confidence 56778888753 34 356667777665544444444444 222678888999999988755
No 148
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=27.54 E-value=3.4e+02 Score=24.35 Aligned_cols=147 Identities=11% Similarity=0.105 Sum_probs=84.1
Q ss_pred CChhHHHHHHHHHHHc-CCCeEecCCCcCC---HHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHH
Q 041428 34 SGDEAFKSVFTAIVEG-GYRHIDTAKQYGV---QENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQE 109 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~-Gi~~~DTA~~Yg~---e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~ 109 (322)
.+.++..+..+.+++. |++.|-.=-.... +...=+++|+.+ .+++-|..... ..++.+...+ +-+.|+.
T Consensus 166 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~-----G~~~~l~vDaN-~~~~~~~A~~-~~~~l~~ 238 (383)
T 3toy_A 166 LDARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALL-----GPDIALMLDFN-QSLDPAEATR-RIARLAD 238 (383)
T ss_dssp CCHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHHH-----CTTSEEEEECT-TCSCHHHHHH-HHHHHGG
T ss_pred CCHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHHh-----CCCCeEEEeCC-CCCCHHHHHH-HHHHHHh
Confidence 4567777788888999 9998764322111 222234555542 23445555542 2344433222 2233444
Q ss_pred hCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHhhcCCCCceec
Q 041428 110 LQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVR-DVGVCNFTLKKLNKLLNFAKTKPSVCQ 188 (322)
Q Consensus 110 Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q 188 (322)
+ ++.++..|-+. +-++.+.++++.-.|- ..|=+-++...+.++++.... +++|
T Consensus 239 ~-----~i~~iEeP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~--d~v~ 292 (383)
T 3toy_A 239 Y-----DLTWIEEPVPQ-------------------ENLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGAS--DFIM 292 (383)
T ss_dssp G-----CCSEEECCSCT-------------------TCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCC--SEEC
T ss_pred h-----CCCEEECCCCc-------------------chHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCC--CEEE
Confidence 4 44555555432 2245567777765554 334455667888888877554 7777
Q ss_pred eeeCCCCC---cHHHHHHHHHcCceEEE
Q 041428 189 MEMHPGWR---NDKILEACKKNGIHVTA 213 (322)
Q Consensus 189 ~~~~~~~~---~~~ll~~~~~~gi~via 213 (322)
+...-.-. ...+..+|+++|+.++.
T Consensus 293 ik~~~~GGit~~~~ia~~A~~~gi~~~~ 320 (383)
T 3toy_A 293 PDLMKVGGITGWLNVAGQADAASIPMSS 320 (383)
T ss_dssp CCTTTTTHHHHHHHHHHHHHHHTCCBCC
T ss_pred eCccccCCHHHHHHHHHHHHHcCCEEee
Confidence 76654322 26799999999999864
No 149
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=27.52 E-value=1.4e+02 Score=24.60 Aligned_cols=33 Identities=12% Similarity=0.153 Sum_probs=26.2
Q ss_pred cceeecccCChhHHHHHHHHHHHcCCCeEecCC
Q 041428 26 AVGLGTWKSGDEAFKSVFTAIVEGGYRHIDTAK 58 (322)
Q Consensus 26 ~lglG~~~~~~~~~~~~l~~Al~~Gi~~~DTA~ 58 (322)
+||+-++........+.++.+-+.|++.++...
T Consensus 11 klg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~ 43 (262)
T 3p6l_A 11 RLGMQSYSFHLFPLTEALDKTQELGLKYIEIYP 43 (262)
T ss_dssp EEEEEGGGGTTSCHHHHHHHHHHTTCCEEEECT
T ss_pred EEEEEecccCCCCHHHHHHHHHHcCCCEEeecC
Confidence 467777765555677899999999999999875
No 150
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=26.95 E-value=1.9e+02 Score=25.16 Aligned_cols=99 Identities=12% Similarity=0.119 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHH
Q 041428 97 DRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFTLKKLNKL 176 (322)
Q Consensus 97 ~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~ 176 (322)
..-+..+-+.|.++|+++|.+-..-+|.... .. .+.++.+..+.+...++..++. -+...++.+
T Consensus 27 ~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p-------------~~--~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a 90 (307)
T 1ydo_A 27 TEDKITWINQLSRTGLSYIEITSFVHPKWIP-------------AL--RDAIDVAKGIDREKGVTYAALV-PNQRGLENA 90 (307)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEEECSCTTTCG-------------GG--TTHHHHHHHSCCCTTCEEEEEC-CSHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcCccccc-------------cc--CCHHHHHHHhhhcCCCeEEEEe-CCHHhHHHH
Confidence 4456677778899999999997644432110 01 1223344555545566666666 356778888
Q ss_pred HhhcCCCCceeceee---------CCCCC-------cHHHHHHHHHcCceEEEe
Q 041428 177 LNFAKTKPSVCQMEM---------HPGWR-------NDKILEACKKNGIHVTAY 214 (322)
Q Consensus 177 ~~~~~~~~~~~q~~~---------~~~~~-------~~~ll~~~~~~gi~via~ 214 (322)
++.+ . +.+.+-. |+-.. -.+.+++++++|+.|.++
T Consensus 91 ~~~g-~--~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~ 141 (307)
T 1ydo_A 91 LEGG-I--NEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAY 141 (307)
T ss_dssp HHHT-C--SEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HhCC-c--CEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 7764 3 2333222 11111 156899999999998643
No 151
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=26.68 E-value=1.5e+02 Score=26.86 Aligned_cols=70 Identities=13% Similarity=0.083 Sum_probs=46.4
Q ss_pred HHHHHHHHHcCCcc-EEEecCCCHHHHHHHHhhcCCCCceeceeeCC--CCCcHHHHHHHHHcCceEEEeccCCC
Q 041428 148 WREMEKLVKDGLVR-DVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHP--GWRNDKILEACKKNGIHVTAYSPLGS 219 (322)
Q Consensus 148 ~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~--~~~~~~ll~~~~~~gi~via~~pl~~ 219 (322)
++.+.+|.+.-.|- +.|=+-++...+.++++.... +++|+.... +.....+...|+++|+.++..+.+.+
T Consensus 259 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~--d~i~~k~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 331 (393)
T 3u9i_A 259 EEGLRRLTATRRVPVAADESVASATDAARLARNAAV--DVLNIKLMKCGIVEALDIAAIARTAGLHLMIGGMVES 331 (393)
T ss_dssp TTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCC--SEEEECHHHHCHHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred HHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCCC--CEEEecccccCHHHHHHHHHHHHHcCCeEEecCCccc
Confidence 34566666654432 445566778888888776544 777776654 11126688999999999998776643
No 152
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=26.17 E-value=2.5e+02 Score=24.42 Aligned_cols=67 Identities=10% Similarity=0.186 Sum_probs=49.9
Q ss_pred cHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEecc
Q 041428 143 DMEGVWREMEKLVKDGLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSP 216 (322)
Q Consensus 143 ~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~p 216 (322)
....+...++.+++++. -|.|-+++++.++++++.+.. .+|- .+.. ...++++.+++.|+.++.+.-
T Consensus 88 E~~Rv~pvI~~l~~~~v--piSIDT~~~~Va~aAl~aGa~--iINd--Vsg~-~d~~m~~v~a~~~~~vVlmh~ 154 (294)
T 2dqw_A 88 EKRRLLPVLEAVLSLGV--PVSVDTRKPEVAEEALKLGAH--LLND--VTGL-RDERMVALAARHGVAAVVMHM 154 (294)
T ss_dssp HHHHHHHHHHHHHTTCS--CEEEECSCHHHHHHHHHHTCS--EEEC--SSCS-CCHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHHHHHhCCC--eEEEECCCHHHHHHHHHhCCC--EEEE--CCCC-CChHHHHHHHHhCCCEEEEcC
Confidence 35667777888877643 489999999999999998542 2333 3333 457899999999999999764
No 153
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=25.83 E-value=82 Score=27.21 Aligned_cols=53 Identities=13% Similarity=0.150 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHH-cCCcc
Q 041428 99 VRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVK-DGLVR 161 (322)
Q Consensus 99 i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~-~Gkir 161 (322)
-++++.+.|+.||+..=|.+++|.--.... ...-..+.++++|.+++. +|-+-
T Consensus 16 t~~~l~~~L~~LGi~~Gd~llVHsSl~~lG----------~v~gg~~~vi~AL~~~vg~~GTLv 69 (268)
T 3ijw_A 16 TIKTITNDLRKLGLKKGMTVIVHSSLSSIG----------WISGGAVAVVEALMEVITEEGTII 69 (268)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEEECTGGGC----------CBTTHHHHHHHHHHHHHCTTSEEE
T ss_pred CHHHHHHHHHHcCCCCCCEEEEEechHHhC----------CCCCCHHHHHHHHHHHhCCCCeEE
Confidence 457788889999999999999997432211 001235789999999886 66543
No 154
>3l52_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, PSI-2, protein structure initiative; 1.35A {Streptomyces avermitilis} PDB: 3v75_A*
Probab=25.75 E-value=3.3e+02 Score=23.58 Aligned_cols=156 Identities=8% Similarity=0.023 Sum_probs=81.6
Q ss_pred CCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCC-HH
Q 041428 93 DLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFT-LK 171 (322)
Q Consensus 93 ~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~-~~ 171 (322)
..+.+.+.+...+..+.++ +++..|=+|..-....| ..-+..+-+.++.+++.|+.-+.=+=-++ +.
T Consensus 42 ~~~~~~~~~~~~~ivd~l~-~~v~~~Kvg~~lf~~~G-----------~~G~~~l~~~i~~l~~~g~~VflDlK~~DIpn 109 (284)
T 3l52_A 42 SDDVAGLERFSRTVVEALG-EHVAVFKPQSAFFERFG-----------SRGVAVLEKTVAEARAAGALVVMDAKRGDIGS 109 (284)
T ss_dssp CSSHHHHHHHHHHHHHHHT-TTCSEEEEBHHHHHTTH-----------HHHHHHHHHHHHHHHHTTCEEEEEEEECCCHH
T ss_pred ccchHHHHHHHHHHHHHhC-CcceEEEeeHHHHHhcC-----------HHHHHHHHHHHHHHHHCCCcEEEEecccCcHH
Confidence 4467788889999999998 78999988875432110 00112233345566677764333333333 33
Q ss_pred HHHHHHhh-cCC--CCceeceeeCCCCCc---HHHHHHHHHcCceEEEeccCCCCCCCCCCCCCHHHHHHHHhcCCCHHH
Q 041428 172 KLNKLLNF-AKT--KPSVCQMEMHPGWRN---DKILEACKKNGIHVTAYSPLGSQGAGRDLIHDPTVERIAKKLNKSPGQ 245 (322)
Q Consensus 172 ~l~~~~~~-~~~--~~~~~q~~~~~~~~~---~~ll~~~~~~gi~via~~pl~~~G~l~~~~~~~~l~~la~~~~~s~~q 245 (322)
......+. ... +..+..+..+++... ...++.+++.|.+|+.-.-+...|. ..++.+....|.+..+
T Consensus 110 Tv~~ya~~~~~~~~~lg~D~vTvh~~~G~~~l~~~~~~a~~~~kgvfvL~~tSnpg~-------~~~q~~~~~~g~~l~e 182 (284)
T 3l52_A 110 TMAAYAEAFLRKDSPLFSDALTVSPYLGYGSLRPAVELARESGAGLFVLALTSNPEG-------GEVQHAVRTDGRDVAA 182 (284)
T ss_dssp HHHHHHHHHSSTTSTTCCSEEEECCTTCGGGGHHHHHHHHHHTCEEEEEEECCSTTT-------HHHHTCBCTTSCBHHH
T ss_pred HHHHHHHHHhccccccCCcEEEEeccCCHHHHHHHHHHHHhcCCeEEEEEeCCCCCh-------HHHHhccccCCCcHHH
Confidence 34443332 221 234555666666544 6788888777666555433333220 1111110011334444
Q ss_pred HHHH----Hhh---hcC-CEEecCCCCHHH
Q 041428 246 ILLK----WGI---HRG-TSVIPKSTHPDR 267 (322)
Q Consensus 246 lal~----~~l---~~~-~~~i~g~~~~~~ 267 (322)
..++ |.. ..+ ..+++|++.++.
T Consensus 183 ~V~~~a~~~~~~~~~~g~~G~VvgAT~pe~ 212 (284)
T 3l52_A 183 TMLAHLAAENAGEEPLGSFGAVVGATLGDL 212 (284)
T ss_dssp HHHHHHHHHTTTCSSCCSEEEEECTTCSCG
T ss_pred HHHHHHHHhccccCcCCCeeEEECCCchhh
Confidence 4433 432 123 778899998875
No 155
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=25.63 E-value=3.7e+02 Score=24.23 Aligned_cols=148 Identities=11% Similarity=0.089 Sum_probs=87.3
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCC--CcC-------CH------HHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHH
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAK--QYG-------VQ------ENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRV 99 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~--~Yg-------~e------~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i 99 (322)
+.++..+..+.+++.|++.|-.=. .|+ +. ...=+++|+.+ .+++-|..... ..++.+..
T Consensus 151 ~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~-----G~d~~l~vDan-~~~~~~~A 224 (404)
T 4e5t_A 151 DADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAV-----GTKADLLFGTH-GQFTVSGA 224 (404)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHH-----GGGSEEEECCC-SCBCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHc-----CCCCeEEEeCC-CCcCHHHH
Confidence 456777778888999999998621 111 11 11223455442 24555666653 23444433
Q ss_pred HHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEe-cCCCHHHHHHHHh
Q 041428 100 RSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGV-CNFTLKKLNKLLN 178 (322)
Q Consensus 100 ~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGv-s~~~~~~l~~~~~ 178 (322)
.+ +-+.|+.++ +.++..|-+. +-++.+.++++.-.|-=.+- +-++.+.+.++++
T Consensus 225 ~~-~~~~l~~~~-----i~~iEeP~~~-------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~ 279 (404)
T 4e5t_A 225 KR-LARRLEAYD-----PLWFEEPIPP-------------------EKPEDMAEVARYTSIPVATGERLCTKYEFSRVLE 279 (404)
T ss_dssp HH-HHHHHGGGC-----CSEEECCSCT-------------------TCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHH
T ss_pred HH-HHHHHhhcC-----CcEEECCCCc-------------------ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHH
Confidence 32 233455555 4455555331 12456777777655554433 4456788888888
Q ss_pred hcCCCCceeceeeCCCCC---cHHHHHHHHHcCceEEEec
Q 041428 179 FAKTKPSVCQMEMHPGWR---NDKILEACKKNGIHVTAYS 215 (322)
Q Consensus 179 ~~~~~~~~~q~~~~~~~~---~~~ll~~~~~~gi~via~~ 215 (322)
.... +++|+.....-. ...+..+|+.+|+.+..+.
T Consensus 280 ~~a~--d~v~~d~~~~GGit~~~~ia~~A~~~gi~~~~h~ 317 (404)
T 4e5t_A 280 TGAA--SILQMNLGRVGGLLEAKKIAAMAECHSAQIAPHL 317 (404)
T ss_dssp HTCC--SEECCCTTTSSCHHHHHHHHHHHHHTTCEECCCC
T ss_pred hCCC--CEEecCccccCCHHHHHHHHHHHHHcCCEEeecC
Confidence 7554 778887655432 2679999999999987664
No 156
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=25.43 E-value=3.4e+02 Score=23.81 Aligned_cols=106 Identities=20% Similarity=0.177 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEec---CCCHHHH
Q 041428 97 DRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVC---NFTLKKL 173 (322)
Q Consensus 97 ~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs---~~~~~~l 173 (322)
..-+..+-+.|.++|+++|-+-..-+|..... . .+... -|+.|..+++...++.-.+. +..++.+
T Consensus 23 ~~~k~~ia~~L~~aGv~~IEvg~~~~p~~~f~--------~-~~~~~---~~e~l~~i~~~~~~~~~~L~r~~~~~~~dv 90 (320)
T 3dxi_A 23 SKIVDAYILAMNELPIDYLEVGYRNKPSKEYM--------G-KFGYT---PVSVLKHLRNISTKKIAIMLNEKNTTPEDL 90 (320)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEECCSCCSSCC--------C-HHHHC---CHHHHHHHHHHCCSEEEEEEEGGGCCGGGH
T ss_pred HHHHHHHHHHHHHhCCCEEEEecccCCccccc--------c-ccccC---hHHHHHHHhhccCCeEEEEecCCCCChhhH
Confidence 34455667788999999988876543332100 0 00011 14444444443445555543 2334456
Q ss_pred HHHHhhcCCCCceeceeeCCCC--CcHHHHHHHHHcCceEEEe
Q 041428 174 NKLLNFAKTKPSVCQMEMHPGW--RNDKILEACKKNGIHVTAY 214 (322)
Q Consensus 174 ~~~~~~~~~~~~~~q~~~~~~~--~~~~ll~~~~~~gi~via~ 214 (322)
..+........+.+.+...+-+ ...+.+++++++|+.+...
T Consensus 91 ~~~~~a~~~Gvd~~ri~~~~~nle~~~~~v~~ak~~G~~v~~~ 133 (320)
T 3dxi_A 91 NHLLLPIIGLVDMIRIAIDPQNIDRAIVLAKAIKTMGFEVGFN 133 (320)
T ss_dssp HHHHGGGTTTCSEEEEEECGGGHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHhhhcCCCEEEEEecHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 5554333233355554443321 1256788899999887764
No 157
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=25.41 E-value=1.7e+02 Score=26.77 Aligned_cols=64 Identities=14% Similarity=0.038 Sum_probs=37.5
Q ss_pred HHHHHHHHHcCCcc---EEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCC---cHHHHHHHHHcCceEEE
Q 041428 148 WREMEKLVKDGLVR---DVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWR---NDKILEACKKNGIHVTA 213 (322)
Q Consensus 148 ~~~L~~l~~~Gkir---~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~---~~~ll~~~~~~gi~via 213 (322)
++.+.+|++.-.+. +.|=+.++...+.++++.... +++|+...-.-. ...+..+|+++|+.++.
T Consensus 250 ~~~~a~l~~~~~~pi~Ia~gE~~~~~~~~~~li~~~a~--dii~~d~~~~GGitea~kia~lA~a~gv~v~~ 319 (404)
T 3ekg_A 250 YWGYAELRRNAPTGMMVTTGEHEATRWGFRMLLEMGCC--DIIQPDVGWCGGVTELLKISALADAHNALVVP 319 (404)
T ss_dssp HHHHHHHHHHSCTTCEEEECTTCCHHHHHHHHHHTTCC--SEECCCTTTTTHHHHHHHHHHHHHHTTCEECC
T ss_pred HHHHHHHHHhcCCCeEEEecCccCCHHHHHHHHHcCCC--CeEecChhhcCCccHHHHHHHHHHHcCCEEEe
Confidence 44556666554432 445555666677777665433 666666544321 25677888888888764
No 158
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=25.39 E-value=3.6e+02 Score=23.94 Aligned_cols=147 Identities=10% Similarity=-0.010 Sum_probs=87.6
Q ss_pred ChhHHHHHHHHHHHcCCCeEecCCCcCCHHH---HHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDTAKQYGVQEN---IGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQ 111 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~e~~---lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg 111 (322)
+.++..+....+.+.|++.|..=-.-++-+. +=+++++. + .+++-|..+.. ..++.+ ...+-++.|.
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a----~-g~~~~l~vDan-~~~~~~----~a~~~~~~l~ 214 (378)
T 2qdd_A 145 TPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISAG----L-PDGHRVTFDVN-RAWTPA----IAVEVLNSVR 214 (378)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHS----C-CTTCEEEEECT-TCCCHH----HHHHHHTSCC
T ss_pred CHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHHH----h-CCCCEEEEeCC-CCCCHH----HHHHHHHHhC
Confidence 4566677778888999999885221112111 22234432 1 23555666652 233432 2233445553
Q ss_pred CCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEec-CCCHHHHHHHHhhcCCCCceecee
Q 041428 112 LDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVC-NFTLKKLNKLLNFAKTKPSVCQME 190 (322)
Q Consensus 112 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs-~~~~~~l~~~~~~~~~~~~~~q~~ 190 (322)
.++ ++..| .+ -++.+.++++.-.|-=++-- -++++.++++++.... +++|+.
T Consensus 215 ---~~i-~iEqP------------------~~---d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~--d~v~ik 267 (378)
T 2qdd_A 215 ---ARD-WIEQP------------------CQ---TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGAC--EGVKIK 267 (378)
T ss_dssp ---CCC-EEECC------------------SS---SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCC--SEEEEC
T ss_pred ---CCc-EEEcC------------------CC---CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCC--CEEEec
Confidence 455 55543 22 46677888877666545443 3468888888877554 777776
Q ss_pred eCCCC---CcHHHHHHHHHcCceEEEeccCC
Q 041428 191 MHPGW---RNDKILEACKKNGIHVTAYSPLG 218 (322)
Q Consensus 191 ~~~~~---~~~~ll~~~~~~gi~via~~pl~ 218 (322)
.+..- ....+..+|+++|+.++..+.+.
T Consensus 268 ~~~~GGi~~~~~i~~~A~~~g~~~~~~~~~e 298 (378)
T 2qdd_A 268 PNRVGGLTRARQIRDFGVSVGWQMHIEDVGG 298 (378)
T ss_dssp HHHHTSHHHHHHHHHHHHHHTCEEEECCSSC
T ss_pred ccccCCHHHHHHHHHHHHHcCCeEEecCCCC
Confidence 54332 22679999999999999986543
No 159
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=25.03 E-value=4.6e+02 Score=25.41 Aligned_cols=18 Identities=17% Similarity=0.381 Sum_probs=12.9
Q ss_pred HHHHHHHHHHcCCCeEec
Q 041428 39 FKSVFTAIVEGGYRHIDT 56 (322)
Q Consensus 39 ~~~~l~~Al~~Gi~~~DT 56 (322)
..++-+.|.++|+..+|-
T Consensus 158 f~~aA~~a~~aGfDgVei 175 (690)
T 3k30_A 158 HRNAVRRSIEAGYDIVYV 175 (690)
T ss_dssp HHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 334445678889998886
No 160
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=24.69 E-value=1.2e+02 Score=26.53 Aligned_cols=58 Identities=17% Similarity=0.123 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHH-HcCCccEEEe
Q 041428 98 RVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLV-KDGLVRDVGV 165 (322)
Q Consensus 98 ~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~-~~Gkir~iGv 165 (322)
.-++++.+.|+.||+..=|.+++|.--.... ...-..+.++++|.+++ .+|-+----+
T Consensus 22 ~T~~~L~~~L~~LGI~~Gd~llVHsSL~~lG----------~v~Gga~~vi~AL~~~vg~~GTLvmPt~ 80 (286)
T 3sma_A 22 VTRDRLASDLAALGVRPGGVLLVHASLSALG----------WVCGGAQAVVLALQDAVGKEGTLVMPTF 80 (286)
T ss_dssp ECHHHHHHHHHHHTCCTTCEEEEEECSTTSC----------EETTHHHHHHHHHHHHHCTTCEEEEECC
T ss_pred cCHHHHHHHHHHcCCCCCCEEEEEechHHhC----------CCCCCHHHHHHHHHHHhcCCCEEEEecc
Confidence 3467888999999999999999997432211 01123578999999888 4776544443
No 161
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=24.32 E-value=4.1e+02 Score=24.31 Aligned_cols=68 Identities=13% Similarity=0.063 Sum_probs=47.2
Q ss_pred HHHHHHHHHcCCcc-EEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCC---cHHHHHHHHHcCceEEEeccC
Q 041428 148 WREMEKLVKDGLVR-DVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWR---NDKILEACKKNGIHVTAYSPL 217 (322)
Q Consensus 148 ~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~---~~~ll~~~~~~gi~via~~pl 217 (322)
++.+.++++.-.|- ..|=+-++...+.++++.... +++|+...-.-. ...+..+|+++|+.++.++..
T Consensus 280 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~--d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 351 (440)
T 3t6c_A 280 TEWLKMLRQQSSTPIAMGELFVNVNEWKPLIDNKLI--DYIRCHISSIGGITPAKKIAIYSELNGVRTAWHSPG 351 (440)
T ss_dssp GGGHHHHHHHCCSCEEECTTCCSHHHHHHHHHTTCC--SEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCSS
T ss_pred HHHHHHHHhhcCCCEEeCcccCCHHHHHHHHHcCCc--cceeechhhhCCHHHHHHHHHHHHHcCCEEEeccCC
Confidence 44577777665543 334456678899999887554 777877654322 267999999999999877663
No 162
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=24.20 E-value=1.8e+02 Score=26.39 Aligned_cols=67 Identities=9% Similarity=-0.047 Sum_probs=45.2
Q ss_pred HHHHHHHHcCCccEEE-ecCCCHHHHHHHHhhcCCCCceeceeeCCCCC---cHHHHHHHHHcCceEEEeccC
Q 041428 149 REMEKLVKDGLVRDVG-VCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWR---NDKILEACKKNGIHVTAYSPL 217 (322)
Q Consensus 149 ~~L~~l~~~Gkir~iG-vs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~---~~~ll~~~~~~gi~via~~pl 217 (322)
+.+.++++.-.+--.+ =+-++.+.+.++++.... +++|+.....-. ...+..+|+.+|+.++.++..
T Consensus 251 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~--d~v~~d~~~~GGit~~~kia~~A~~~gi~~~~h~~~ 321 (400)
T 4dxk_A 251 SSLTRYAAVSPAPISASETLGSRWAFRDLLETGAA--GVVMLDISWCGGLSEARKIASMAEAWHLPVAPHXCT 321 (400)
T ss_dssp GGHHHHHHHCSSCEEECTTCCHHHHHHHHHHTTCC--CEEEECTTTTTHHHHHHHHHHHHHHTTCCEEEC-CC
T ss_pred HHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCC--CEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 3466777765554333 344567888888876544 788887655432 267999999999999887653
No 163
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=24.19 E-value=3.7e+02 Score=23.74 Aligned_cols=40 Identities=13% Similarity=0.150 Sum_probs=26.0
Q ss_pred HHHHHHHHHcCCccEEEecCC-CHHHHHHHHhhcCCCCceece
Q 041428 148 WREMEKLVKDGLVRDVGVCNF-TLKKLNKLLNFAKTKPSVCQM 189 (322)
Q Consensus 148 ~~~L~~l~~~Gkir~iGvs~~-~~~~l~~~~~~~~~~~~~~q~ 189 (322)
++...++++.=.+--|++..+ +++..+++++.+.. +++++
T Consensus 266 ~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~a--D~V~i 306 (343)
T 3kru_A 266 VKYAETIKKRCNIKTSAVGLITTQELAEEILSNERA--DLVAL 306 (343)
T ss_dssp HHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSC--SEEEE
T ss_pred ehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhh--HHHHH
Confidence 344455555445667888876 58889999887654 45544
No 164
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=24.18 E-value=3e+02 Score=22.56 Aligned_cols=52 Identities=8% Similarity=0.096 Sum_probs=34.3
Q ss_pred CccCcceeecccC-ChhHHHHHHHHHHHcCCCeEecCCCc--C-CHHHHHHHHHHH
Q 041428 22 HTIPAVGLGTWKS-GDEAFKSVFTAIVEGGYRHIDTAKQY--G-VQENIGLALKEA 73 (322)
Q Consensus 22 ~~vs~lglG~~~~-~~~~~~~~l~~Al~~Gi~~~DTA~~Y--g-~e~~lG~~l~~~ 73 (322)
....++|+-++.. ......+.++.+-+.|+..|+..... . .-+.+.+.+++.
T Consensus 2 m~~~~lg~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~ 57 (275)
T 3qc0_A 2 MQVEGLSINLATIREQCGFAEAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRAN 57 (275)
T ss_dssp CCCTTEEEEGGGGTTTCCHHHHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHH
T ss_pred CCcccceeeeeeccCCCCHHHHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHc
Confidence 4456778888765 44456788999999999999975431 1 233355555554
No 165
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=23.47 E-value=3.1e+02 Score=22.57 Aligned_cols=113 Identities=14% Similarity=0.070 Sum_probs=68.0
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCcc
Q 041428 82 DLFVTSKLWCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVR 161 (322)
Q Consensus 82 ~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir 161 (322)
.+.++..+.........+...+.+.+++.+...-.+ .+--.+... ......+.+.+..|++.|-
T Consensus 90 ~~~l~iNls~~~l~~~~~~~~l~~~l~~~~~~~~~l-~lEitE~~~-------------~~~~~~~~~~l~~l~~~G~-- 153 (259)
T 3s83_A 90 NLTVSVNLSTGEIDRPGLVADVAETLRVNRLPRGAL-KLEVTESDI-------------MRDPERAAVILKTLRDAGA-- 153 (259)
T ss_dssp CCEEEEECCTTGGGSTTHHHHHHHHHHHTTCCTTSE-EEEEEHHHH-------------HHCHHHHHHHHHHHHHHTC--
T ss_pred ceEEEEEcCHHHhCCcHHHHHHHHHHHHcCCCcceE-EEEECCchh-------------hhCHHHHHHHHHHHHHCCC--
Confidence 466777775555555567788888898888653222 222211110 0234677888999999998
Q ss_pred EEEecCCCH--HHHHHHHhhcCCCCceeceeeCCC----CCc------HHHHHHHHHcCceEEE
Q 041428 162 DVGVCNFTL--KKLNKLLNFAKTKPSVCQMEMHPG----WRN------DKILEACKKNGIHVTA 213 (322)
Q Consensus 162 ~iGvs~~~~--~~l~~~~~~~~~~~~~~q~~~~~~----~~~------~~ll~~~~~~gi~via 213 (322)
.|.+.+|.. ..+..+.. .+++.+-+.-+.. ... ..++..|++.|+.|++
T Consensus 154 ~ialDdfG~g~ssl~~L~~---l~~d~iKiD~~~v~~~~~~~~~~~~~~~i~~~a~~~g~~via 214 (259)
T 3s83_A 154 GLALDDFGTGFSSLSYLTR---LPFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVA 214 (259)
T ss_dssp EEEEECC---CHHHHHHHH---SCCCEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEECCCCCchhHHHHHh---CCCCEEEECHHHHhhhhcCchHHHHHHHHHHHHHHCCCeEEE
Confidence 466666653 33444433 3445554443221 111 5689999999999998
No 166
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=23.32 E-value=4e+02 Score=23.81 Aligned_cols=148 Identities=18% Similarity=0.174 Sum_probs=86.6
Q ss_pred ChhHHHHHHHHHHHcCCCeEec--CCCcCCHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHhCC
Q 041428 35 GDEAFKSVFTAIVEGGYRHIDT--AKQYGVQENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQELQL 112 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~Gi~~~DT--A~~Yg~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~ 112 (322)
+.++..+....+++.|++.|-. .+.. ..+.+ +++++. + .++-|..-.. ..++.+.. + -++.|.
T Consensus 161 ~~e~~~~~a~~~~~~G~~~~KiKvg~~~-d~~~v-~avr~a----~--~~~~l~vDaN-~~~~~~~a-~----~~~~l~- 225 (393)
T 1wuf_A 161 NVETLLQLVNQYVDQGYERVKLKIAPNK-DIQFV-EAVRKS----F--PKLSLMADAN-SAYNREDF-L----LLKELD- 225 (393)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECBTTB-SHHHH-HHHHTT----C--TTSEEEEECT-TCCCGGGH-H----HHHTTG-
T ss_pred CHHHHHHHHHHHHHHhhHhheeccChHH-HHHHH-HHHHHH----c--CCCEEEEECC-CCCCHHHH-H----HHHHHH-
Confidence 4566667777888999998743 2111 22222 445543 2 2444444442 23455443 2 334433
Q ss_pred CccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHhhcCCCCceeceee
Q 041428 113 DYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVR-DVGVCNFTLKKLNKLLNFAKTKPSVCQMEM 191 (322)
Q Consensus 113 d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~ 191 (322)
..++.++..|-+. +-++.+.+|.++-.|- ..|=+-++...+.++++.... +++|+..
T Consensus 226 -~~~i~~iEqP~~~-------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~--d~v~ik~ 283 (393)
T 1wuf_A 226 -QYDLEMIEQPFGT-------------------KDFVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSC--RAINLKL 283 (393)
T ss_dssp -GGTCSEEECCSCS-------------------SCSHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCC--SEEEECT
T ss_pred -hCCCeEEECCCCC-------------------cCHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCC--CEEEeCh
Confidence 3567778777542 1244566777664443 233345678888888877544 6777765
Q ss_pred CCCCC---cHHHHHHHHHcCceEEEeccCCC
Q 041428 192 HPGWR---NDKILEACKKNGIHVTAYSPLGS 219 (322)
Q Consensus 192 ~~~~~---~~~ll~~~~~~gi~via~~pl~~ 219 (322)
+..-. ...+..+|+++|+.++..+.+.+
T Consensus 284 ~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 314 (393)
T 1wuf_A 284 ARVGGMSSALKIAEYCALNEILVWCGGMLEA 314 (393)
T ss_dssp GGGTSHHHHHHHHHHHHHTTCEEEECCCCCC
T ss_pred hhhCCHHHHHHHHHHHHHcCCeEEecCCccc
Confidence 44322 26789999999999987766643
No 167
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=23.09 E-value=96 Score=25.86 Aligned_cols=66 Identities=11% Similarity=0.261 Sum_probs=40.6
Q ss_pred HHHHHHcCCccEEEecCCCHHHHHHHHhhcC-CCCceec---------------eeeC--CCCCcHHHHHHHHHcCceEE
Q 041428 151 MEKLVKDGLVRDVGVCNFTLKKLNKLLNFAK-TKPSVCQ---------------MEMH--PGWRNDKILEACKKNGIHVT 212 (322)
Q Consensus 151 L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~-~~~~~~q---------------~~~~--~~~~~~~ll~~~~~~gi~vi 212 (322)
++.+++.|....+=+++|+...+.++.+... ++..... +.++ .+....+++..++++|+.|.
T Consensus 121 ~~~l~~~~~~~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~~v~ 200 (238)
T 3no3_A 121 VQMVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVSYLNGELSPMELKELGFTGLDYHYKVLQSHPDWVKDCKVLGMTSN 200 (238)
T ss_dssp HHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSCEEECSSCSCHHHHHHTTCCEEEEEHHHHHHSTTHHHHHHHTTCEEE
T ss_pred HHHHHHcCCcCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCCCHHHHHHCCCceEeccHHhhhCCHHHHHHHHHCCCEEE
Confidence 3444556777888999999999988877643 1111100 0000 00012467888999999999
Q ss_pred Eecc
Q 041428 213 AYSP 216 (322)
Q Consensus 213 a~~p 216 (322)
+|..
T Consensus 201 ~WTV 204 (238)
T 3no3_A 201 VWTV 204 (238)
T ss_dssp EECC
T ss_pred EECC
Confidence 9864
No 168
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=22.70 E-value=4.2e+02 Score=23.76 Aligned_cols=154 Identities=10% Similarity=0.050 Sum_probs=91.8
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCCCcC---CHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHHHh
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAKQYG---VQENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQEL 110 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~L 110 (322)
.+.++..+.++.+++.|++.|=.=-.-+ .+...=+++++. ++ ++-|..-. ...++++.. .+-+++|
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlKvg~~~~~~d~~~v~avR~~----~~--~~~L~vDa-N~~w~~~~A----~~~~~~L 211 (389)
T 3s5s_A 143 GSPERAEEAARRAAAMGFRALKVKVGGRLAASDPARIEAIHAA----AP--GASLILDG-NGGLTAGEA----LALVAHA 211 (389)
T ss_dssp SCSHHHHHHHHHHHHHTCCEEEEECCGGGTTTHHHHHHHHHHH----CT--TCEEEEEC-TTCSCHHHH----HHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecCCChHHHHHHHHHHHHh----CC--CCeEEEEC-CCCCCHHHH----HHHHHHH
Confidence 3556777778888999999875321111 222333456654 22 22333322 123444333 2334555
Q ss_pred CCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCc-cEEEecCCCHHHHHHHHhhcCCCCceece
Q 041428 111 QLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLV-RDVGVCNFTLKKLNKLLNFAKTKPSVCQM 189 (322)
Q Consensus 111 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gki-r~iGvs~~~~~~l~~~~~~~~~~~~~~q~ 189 (322)
..+..++.++-.|-+. +-++.+.+|.+.-.| -+.|=|-++...+.++++.... +++|+
T Consensus 212 ~~~~~~i~~iEeP~~~-------------------~d~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~--d~v~~ 270 (389)
T 3s5s_A 212 RRLGADVALLEQPVPR-------------------DDWDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAA--TVVNI 270 (389)
T ss_dssp HHTTCEEEEEECCSCT-------------------TCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCC--SEEEE
T ss_pred hhCCCCeEEEECCCCc-------------------ccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCC--CEEEe
Confidence 2244688888887542 224556667665444 3456667788888888877554 77887
Q ss_pred eeCC--CCCcHHHHHHHHHcCceEEEeccCCC
Q 041428 190 EMHP--GWRNDKILEACKKNGIHVTAYSPLGS 219 (322)
Q Consensus 190 ~~~~--~~~~~~ll~~~~~~gi~via~~pl~~ 219 (322)
.... +.....+...|+++|+.++..+.+.+
T Consensus 271 k~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 302 (389)
T 3s5s_A 271 KLMKGGIAEALDIAAVARAAGLGLMIGGMVES 302 (389)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCEEEECCSSCC
T ss_pred cCCCCCHHHHHHHHHHHHHcCCeEEecCCccc
Confidence 7654 11115688999999999999877654
No 169
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=22.64 E-value=4.3e+02 Score=23.91 Aligned_cols=149 Identities=13% Similarity=0.088 Sum_probs=88.1
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCC--CcC-------CHH------HHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHH
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAK--QYG-------VQE------NIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDR 98 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~--~Yg-------~e~------~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~ 98 (322)
.+.++..+..+.+++.|++.|-.=. .|+ +.+ ..=+++|+.+ .+++-|..... ..++.+.
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~-----G~d~~l~vDaN-~~~~~~~ 216 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAV-----GSKADLLFGTH-GQMVPSS 216 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHH-----TTSSEEEECCC-SCBCHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHh-----CCCCeEEEECC-CCCCHHH
Confidence 3567777888888999999988632 111 111 1223444432 24455555653 2344433
Q ss_pred HHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEE-ecCCCHHHHHHHH
Q 041428 99 VRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVG-VCNFTLKKLNKLL 177 (322)
Q Consensus 99 i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iG-vs~~~~~~l~~~~ 177 (322)
..+ +-+.|+.++ +.++..|-+. +-++.+.++++.-.|--.+ =+-++.+.+.+++
T Consensus 217 A~~-~~~~L~~~~-----i~~iEeP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i 271 (412)
T 4e4u_A 217 AIR-LAKRLEKYD-----PLWFEEPVPP-------------------GQEEAIAQVAKHTSIPIATGERLTTKYEFHKLL 271 (412)
T ss_dssp HHH-HHHHHGGGC-----CSEEECCSCS-------------------SCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHH
T ss_pred HHH-HHHHhhhcC-----CcEEECCCCh-------------------hhHHHHHHHHhhCCCCEEecCccCCHHHHHHHH
Confidence 322 223455554 4455555432 1246678888876655333 3445678888888
Q ss_pred hhcCCCCceeceeeCCCCC---cHHHHHHHHHcCceEEEec
Q 041428 178 NFAKTKPSVCQMEMHPGWR---NDKILEACKKNGIHVTAYS 215 (322)
Q Consensus 178 ~~~~~~~~~~q~~~~~~~~---~~~ll~~~~~~gi~via~~ 215 (322)
+.... +++|+...-.-. ...+..+|+++|+.++.+.
T Consensus 272 ~~~a~--d~v~~d~~~~GGit~~~kia~~A~~~gi~v~~h~ 310 (412)
T 4e4u_A 272 QAGGA--SILQLNVARVGGLLEAKKIATLAEVHYAQIAPHL 310 (412)
T ss_dssp HTTCC--SEECCCTTTTTSHHHHHHHHHHHHHTTCEECCCC
T ss_pred HcCCC--CEEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 86554 788887655432 2679999999999987764
No 170
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=22.56 E-value=1.6e+02 Score=24.56 Aligned_cols=29 Identities=14% Similarity=0.314 Sum_probs=21.7
Q ss_pred HHHHHcCCccEEEecCCCHHHHHHHHhhc
Q 041428 152 EKLVKDGLVRDVGVCNFTLKKLNKLLNFA 180 (322)
Q Consensus 152 ~~l~~~Gkir~iGvs~~~~~~l~~~~~~~ 180 (322)
+.+++.|....+=+++|+.+.+.++.+..
T Consensus 124 ~~l~~~~~~~~v~~~SF~~~~l~~~~~~~ 152 (250)
T 3ks6_A 124 AGLERHSMLERTTFSSFLLASMDELWKAT 152 (250)
T ss_dssp HHHHHTTCGGGEEEEESCHHHHHHHHHHC
T ss_pred HHHHhcCCCCCEEEEeCCHHHHHHHHHHC
Confidence 33445577778889999999888887654
No 171
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=22.47 E-value=2.1e+02 Score=26.00 Aligned_cols=67 Identities=7% Similarity=0.015 Sum_probs=46.0
Q ss_pred HHHHHHHHHcCCcc-EEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCC---cHHHHHHHHHcCceEEEecc
Q 041428 148 WREMEKLVKDGLVR-DVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWR---NDKILEACKKNGIHVTAYSP 216 (322)
Q Consensus 148 ~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~---~~~ll~~~~~~gi~via~~p 216 (322)
++.+.++++.-.|- ..|=+-++.+.+.++++.... +++|+.....-. ...+..+|+++|+.++.++.
T Consensus 254 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~--d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 324 (410)
T 3dip_A 254 IPAVADLRRQTRAPICGGENLAGTRRFHEMLCADAI--DFVMLDLTWCGGLSEGRKIAALAETHARPLAPHXT 324 (410)
T ss_dssp HHHHHHHHHHHCCCEEECTTCCSHHHHHHHHHTTCC--SEEEECTTTSSCHHHHHHHHHHHHHTTCCEEECSS
T ss_pred HHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCC--CeEeecccccCCHHHHHHHHHHHHHcCCEEeeeCc
Confidence 34556666654443 334455678889988887554 788887655432 26799999999999988766
No 172
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=22.43 E-value=2.3e+02 Score=24.41 Aligned_cols=101 Identities=16% Similarity=0.078 Sum_probs=56.0
Q ss_pred CChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCCCHHHH
Q 041428 94 LSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNFTLKKL 173 (322)
Q Consensus 94 ~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l 173 (322)
++.+. +..+-+.|.++|+++|.+-..-.|... + .+ .+.++.+..+.+...++..++. .+...+
T Consensus 24 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~-p------------~~--~d~~~~~~~~~~~~~~~~~~l~-~~~~~i 86 (298)
T 2cw6_A 24 VSTPV-KIKLIDMLSEAGLSVIETTSFVSPKWV-P------------QM--GDHTEVLKGIQKFPGINYPVLT-PNLKGF 86 (298)
T ss_dssp CCHHH-HHHHHHHHHHTTCSEECCEECCCTTTC-G------------GG--TTHHHHHHHSCCCTTCBCCEEC-CSHHHH
T ss_pred CCHHH-HHHHHHHHHHcCcCEEEECCCcCcccc-c------------cc--CCHHHHHHHHhhCCCCEEEEEc-CCHHhH
Confidence 44444 447777889999999999754433211 0 01 1223334444433334444444 456777
Q ss_pred HHHHhhcCCCCceeceeeCCCC--------C--------cHHHHHHHHHcCceEEEe
Q 041428 174 NKLLNFAKTKPSVCQMEMHPGW--------R--------NDKILEACKKNGIHVTAY 214 (322)
Q Consensus 174 ~~~~~~~~~~~~~~q~~~~~~~--------~--------~~~ll~~~~~~gi~via~ 214 (322)
+.+.+.+ . +.+.+-...-+ . -.+.+++++++|+.|.++
T Consensus 87 ~~a~~ag-~--~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~ 140 (298)
T 2cw6_A 87 EAAVAAG-A--KEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGY 140 (298)
T ss_dssp HHHHHTT-C--SEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHCC-C--CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 7777753 3 34444332211 0 146789999999998754
No 173
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=22.37 E-value=2.4e+02 Score=20.80 Aligned_cols=64 Identities=20% Similarity=0.207 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEe
Q 041428 145 EGVWREMEKLVKDGLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAY 214 (322)
Q Consensus 145 ~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~ 214 (322)
+.+...|....+.|++. .|+ .+..++++.+.....++--..++..-...+..+|+++||+++-+
T Consensus 6 ~ki~~~L~~a~k~gkl~-~G~-----~~v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v 69 (121)
T 2lbw_A 6 KKVLKTVKKASKAKNVK-RGV-----KEVVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFI 69 (121)
T ss_dssp HHHHHHHHHHHTTTCEE-ESH-----HHHHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEEC
T ss_pred HHHHHHHHHHHHcCCcc-ccH-----HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEE
Confidence 45666677777778753 354 56777777777666666666655544467888999999998653
No 174
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=22.37 E-value=2.9e+02 Score=24.44 Aligned_cols=119 Identities=11% Similarity=-0.018 Sum_probs=64.2
Q ss_pred ccHHHHHHHHHHHHHcCCccEEEecC-------CCHHHHHHHHhhcC-CCCceeceeeCCCCCcHHHHHHHHHcCceEEE
Q 041428 142 FDMEGVWREMEKLVKDGLVRDVGVCN-------FTLKKLNKLLNFAK-TKPSVCQMEMHPGWRNDKILEACKKNGIHVTA 213 (322)
Q Consensus 142 ~~~~~~~~~L~~l~~~Gkir~iGvs~-------~~~~~l~~~~~~~~-~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via 213 (322)
.+.+++.+.++++++.| ++.|-++. .+.+.+.++++... ..+.+ ..++.....+.++..++.|+..+.
T Consensus 99 ~s~eei~~~~~~~~~~g-~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~~i---~~t~G~l~~e~l~~L~~aGvd~v~ 174 (369)
T 1r30_A 99 MEVEQVLESARKAKAAG-STRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEA---CMTLGTLSESQAQRLANAGLDYYN 174 (369)
T ss_dssp CCHHHHHHHHHHHHHTT-CSEEEEEECCSSCCTTTHHHHHHHHHHHHHTTSEE---EEECSSCCHHHHHHHHHHCCCEEE
T ss_pred CCHHHHHHHHHHHHHcC-CcEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCCeE---EEecCCCCHHHHHHHHHCCCCEEe
Confidence 46789999999888877 44444421 23455555554432 11222 234444457788888898988776
Q ss_pred eccCCCCCCCCCCCCCHHHHHHHHhcCCCHHHHHHHHhhhcC----CEEecCC-CCHHHHHHhHh
Q 041428 214 YSPLGSQGAGRDLIHDPTVERIAKKLNKSPGQILLKWGIHRG----TSVIPKS-THPDRIKENIK 273 (322)
Q Consensus 214 ~~pl~~~G~l~~~~~~~~l~~la~~~~~s~~qlal~~~l~~~----~~~i~g~-~~~~~l~~nl~ 273 (322)
.+.=+ ..+.++.+...+.....--+++.+...| ..+|+|. .+.+++.+.+.
T Consensus 175 i~les---------~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~I~Gl~et~ed~~~~l~ 230 (369)
T 1r30_A 175 HNLDT---------SPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLL 230 (369)
T ss_dssp CCCBS---------CHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEECCEEECSSCCHHHHHHHHH
T ss_pred ecCcC---------CHHHHHHhCCCCCHHHHHHHHHHHHHcCCeeeeeeEeeCCCCHHHHHHHHH
Confidence 44321 2344444443222122222344444433 5567776 56666666543
No 175
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=22.33 E-value=4.3e+02 Score=23.72 Aligned_cols=147 Identities=13% Similarity=0.105 Sum_probs=84.2
Q ss_pred ChhHHHHHHHHHHHc---CCCeEecCCCcC---CHHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHHHHHHHHHHHH
Q 041428 35 GDEAFKSVFTAIVEG---GYRHIDTAKQYG---VQENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDRVRSALNNTLQ 108 (322)
Q Consensus 35 ~~~~~~~~l~~Al~~---Gi~~~DTA~~Yg---~e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~ 108 (322)
+.++..+.++.+++. |++.|-.=-... .+...=+++|+.+ .+++-|..... ..++.+.. .+-++
T Consensus 171 ~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a~-----G~~~~l~vDaN-~~~~~~~A----~~~~~ 240 (390)
T 3ugv_A 171 PAEVAAEAVELKAEGQGTGFKGLKLRMGRDDPAVDIETAEAVWDAV-----GRDTALMVDFN-QGLDMAEA----MHRTR 240 (390)
T ss_dssp HHHHHHHHHHHHHTTCTTCCSEEEEECCCSSHHHHHHHHHHHHHHH-----CTTSEEEEECT-TCCCHHHH----HHHHH
T ss_pred CHHHHHHHHHHHHHhhhCCCcEEEEecCCCCHHHHHHHHHHHHHHh-----CCCCEEEEECC-CCCCHHHH----HHHHH
Confidence 456667777888888 999876432211 1222234555542 23455555552 23444332 22334
Q ss_pred HhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHhhcCCCCcee
Q 041428 109 ELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVR-DVGVCNFTLKKLNKLLNFAKTKPSVC 187 (322)
Q Consensus 109 ~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~ 187 (322)
.|. ..++.++..|-+. +-++.+.++++.-.|. ..|=+-++...+.++++.... +++
T Consensus 241 ~l~--~~~i~~iEqP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~--d~v 297 (390)
T 3ugv_A 241 QID--DLGLEWIEEPVVY-------------------DNFDGYAQLRHDLKTPLMIGENFYGPREMHQALQAGAC--DLV 297 (390)
T ss_dssp HHT--TSCCSEEECCSCT-------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC--SEE
T ss_pred HHH--hhCCCEEECCCCc-------------------ccHHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcCCC--CEE
Confidence 443 2345566665432 1245567777665553 334456778899988876554 777
Q ss_pred ceeeCCC---CCcHHHHHHHHHcCceEEEe
Q 041428 188 QMEMHPG---WRNDKILEACKKNGIHVTAY 214 (322)
Q Consensus 188 q~~~~~~---~~~~~ll~~~~~~gi~via~ 214 (322)
|+..... .....+...|+++|+.++..
T Consensus 298 ~ik~~~~GGit~~~~i~~~A~~~gi~~~~h 327 (390)
T 3ugv_A 298 MPDFMRIGGVSGWMRAAGVAGAWGIPMSTH 327 (390)
T ss_dssp CCBHHHHTHHHHHHHHHHHHHHHTCCBCCB
T ss_pred EeCccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 7765432 12267999999999998643
No 176
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=22.33 E-value=2.2e+02 Score=25.68 Aligned_cols=66 Identities=18% Similarity=0.128 Sum_probs=45.1
Q ss_pred HHHHHHHHHcCCccEEE-ecCCCHHHHHHHHhhcCCCCceeceeeCCCCC---cHHHHHHHHHcCceEEEec
Q 041428 148 WREMEKLVKDGLVRDVG-VCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWR---NDKILEACKKNGIHVTAYS 215 (322)
Q Consensus 148 ~~~L~~l~~~Gkir~iG-vs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~---~~~ll~~~~~~gi~via~~ 215 (322)
++.+.++++.-.|-=.+ =+-++...+.++++.... +++|+...-.-. ...+..+|+++|+.++.++
T Consensus 246 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~--d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 315 (394)
T 3mkc_A 246 LSGHAKLVENTRSRICGAEMSTTRFEAEEWITKGKV--HLLQSDYNRCGGLTELRRITEMATANNVQVMPHN 315 (394)
T ss_dssp HHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCC--SEECCCTTTTTHHHHHHHHHHHHHHTTCEECCCC
T ss_pred HHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCC--CeEecCccccCCHHHHHHHHHHHHHcCCEEeecC
Confidence 45677777765554333 344567888888876554 777877655422 2678999999999998765
No 177
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=22.00 E-value=4.5e+02 Score=23.89 Aligned_cols=151 Identities=20% Similarity=0.207 Sum_probs=88.1
Q ss_pred CChhHHHHHHHHHHHcCCCeEecCC-CcC-------------------CH------HHHHHHHHHHHhcCCCCCcEEEEe
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTAK-QYG-------------------VQ------ENIGLALKEAMQTGIQRKDLFVTS 87 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA~-~Yg-------------------~e------~~lG~~l~~~~~~~~~R~~~~i~t 87 (322)
.+.++..+.++.+++.|++.|-.=- .++ .+ ..+=+++|+.+ .+++-|..
T Consensus 153 ~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~av-----G~d~~L~v 227 (422)
T 3tji_A 153 ETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKY-----GWKLHILH 227 (422)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHH-----CSSSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHc-----CCCCEEEE
Confidence 4567778888889999999876311 011 01 11224455442 24455555
Q ss_pred cCCCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccE-EEec
Q 041428 88 KLWCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRD-VGVC 166 (322)
Q Consensus 88 K~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~-iGvs 166 (322)
... ..++.+...+ +-+.|+.++ +.++..|-+. +-++.+.++++.-.|-= .|=+
T Consensus 228 DaN-~~~~~~~A~~-~~~~Le~~~-----i~~iEqP~~~-------------------~d~~~~~~l~~~~~iPIa~dE~ 281 (422)
T 3tji_A 228 DVH-ERLFPQQAVQ-LAKQLEPFQ-----PYFIEDILPP-------------------QQSAWLEQVRQQSCVPLALGEL 281 (422)
T ss_dssp ECT-TCSCHHHHHH-HHHHHGGGC-----CSEEECCSCG-------------------GGGGGHHHHHHHCCCCEEECTT
T ss_pred ECC-CCCCHHHHHH-HHHHHHhhC-----CCeEECCCCh-------------------hhHHHHHHHHhhCCCCEEEeCC
Confidence 653 2344443322 223444444 4455555331 22455777777655543 3334
Q ss_pred CCCHHHHHHHHhhcCCCCceeceeeCCCC---CcHHHHHHHHHcCceEEEeccC
Q 041428 167 NFTLKKLNKLLNFAKTKPSVCQMEMHPGW---RNDKILEACKKNGIHVTAYSPL 217 (322)
Q Consensus 167 ~~~~~~l~~~~~~~~~~~~~~q~~~~~~~---~~~~ll~~~~~~gi~via~~pl 217 (322)
-++.+.+.++++.... +++|+.....- ....+..+|+.+|+.++.+++.
T Consensus 282 ~~~~~~~~~ll~~ga~--d~v~~k~~~~GGit~~~kia~lA~a~gv~v~~h~~~ 333 (422)
T 3tji_A 282 FNNPAEWHDLIVNRRI--DFIRCHVSQIGGITPALKLAHLCQAFGVRLAWHGPG 333 (422)
T ss_dssp CCSGGGTHHHHHTTCC--SEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred cCCHHHHHHHHhcCCC--CEEecCccccCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 5678888888887554 77787664432 2267999999999999887763
No 178
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=21.94 E-value=4.5e+02 Score=23.80 Aligned_cols=71 Identities=11% Similarity=0.050 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHc-----CCc-cEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCC---CcHHHHHHHHHcCceEEEec
Q 041428 145 EGVWREMEKLVKD-----GLV-RDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGW---RNDKILEACKKNGIHVTAYS 215 (322)
Q Consensus 145 ~~~~~~L~~l~~~-----Gki-r~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~---~~~~ll~~~~~~gi~via~~ 215 (322)
.+-++.+.+|.++ -.| -..|=+.++.+.+.++++.... +++|+..+-.- ...++..+|+++|+.++.++
T Consensus 282 ~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~--d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~ 359 (413)
T 1kko_A 282 PDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSC--HMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGG 359 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCC--SEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECC
T ss_pred cccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCC--CEEEeCccccCCHHHHHHHHHHHHHcCCeEEecC
Confidence 4567777777775 333 2334455678888888876443 77777665432 22679999999999999987
Q ss_pred cC
Q 041428 216 PL 217 (322)
Q Consensus 216 pl 217 (322)
..
T Consensus 360 ~~ 361 (413)
T 1kko_A 360 TC 361 (413)
T ss_dssp CT
T ss_pred CC
Confidence 65
No 179
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=21.91 E-value=4.5e+02 Score=23.88 Aligned_cols=151 Identities=11% Similarity=0.062 Sum_probs=88.2
Q ss_pred CChhHHHHHHHHHHHcCCCeEec--C-----CCcC----------------------------CHHHHHHHHHHHHhcCC
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDT--A-----KQYG----------------------------VQENIGLALKEAMQTGI 78 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DT--A-----~~Yg----------------------------~e~~lG~~l~~~~~~~~ 78 (322)
.+.++..+.++.+++.|++.|=. . ..|| ....+=+++|+.+
T Consensus 149 ~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~a~---- 224 (425)
T 3vcn_A 149 ETIEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLFERAREVL---- 224 (425)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHHHHHHHHH----
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHHHHHHHHc----
Confidence 45677788888999999987642 1 1121 0112234566542
Q ss_pred CCCcEEEEecCCCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcC
Q 041428 79 QRKDLFVTSKLWCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDG 158 (322)
Q Consensus 79 ~R~~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~G 158 (322)
.+++-|..... ..++.+...+ +-+.|+.++ +.++..|-+. +-++.+.++++.-
T Consensus 225 -G~d~~l~vDaN-~~~~~~~A~~-~~~~L~~~~-----i~~iEqP~~~-------------------~d~~~~~~l~~~~ 277 (425)
T 3vcn_A 225 -GWDVHLLHDVH-HRLTPIEAAR-LGKDLEPYR-----LFWLEDSVPA-------------------ENQAGFRLIRQHT 277 (425)
T ss_dssp -CSSSEEEEECT-TCCCHHHHHH-HHHHHGGGC-----CSEEECCSCC-------------------SSTTHHHHHHHHC
T ss_pred -CCCCEEEEECC-CCCCHHHHHH-HHHHHHhcC-----CCEEECCCCh-------------------hhHHHHHHHHhcC
Confidence 23445555542 2345444332 223455554 4455655432 1133467777765
Q ss_pred CccEE-EecCCCHHHHHHHHhhcCCCCceeceeeCCCCC---cHHHHHHHHHcCceEEEeccC
Q 041428 159 LVRDV-GVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWR---NDKILEACKKNGIHVTAYSPL 217 (322)
Q Consensus 159 kir~i-Gvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~---~~~ll~~~~~~gi~via~~pl 217 (322)
.|--. |=+-++...+.++++.... +++|+.....-. ...+..+|+++|+.++.++.+
T Consensus 278 ~iPIa~dE~~~~~~~~~~~i~~~a~--d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 338 (425)
T 3vcn_A 278 TTPLAVGEIFAHVWDAKQLIEEQLI--DYLRATVLHAGGITNLKKIAAFADLHHVKTGCHGAT 338 (425)
T ss_dssp CSCEEECTTCCSGGGTHHHHHTTCC--SEECCCTTTTTHHHHHHHHHHHHGGGTCEECCCCCT
T ss_pred CCCEEeCCCcCCHHHHHHHHHcCCC--CeEecChhhcCCHHHHHHHHHHHHHcCCEEeeccCC
Confidence 55433 3344578888888887554 778887655422 267999999999999887764
No 180
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=21.81 E-value=1.5e+02 Score=23.15 Aligned_cols=80 Identities=9% Similarity=0.005 Sum_probs=56.7
Q ss_pred CChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHc---CCccEEEecCCCH
Q 041428 94 LSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKD---GLVRDVGVCNFTL 170 (322)
Q Consensus 94 ~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~---Gkir~iGvs~~~~ 170 (322)
.+.+.+.+.+++.-+.+|.+ ++++|- ..-.++.+.+++..++ |.|-.=|--+|+.
T Consensus 24 ~tl~di~~~l~~~a~~~g~~-v~~~QS---------------------N~EgeLId~Ih~a~~~~~dgiIINpgA~THtS 81 (149)
T 2uyg_A 24 TTLEELEALCEAWGAELGLG-VVFRQT---------------------NYEGQLIEWVQQAHQEGFLAIVLNPGALTHYS 81 (149)
T ss_dssp CCHHHHHHHHHHHHHHTTCC-EEEEEC---------------------SCHHHHHHHHHHTTTTTCSEEEEECGGGGGTC
T ss_pred CCHHHHHHHHHHHHHHcCCE-EEEEee---------------------CCHHHHHHHHHHhccCCeeEEEEccchhcccc
Confidence 46789999999999999974 777762 2346889999888655 3344446666776
Q ss_pred HHHHHHHhhcCCCCceeceeeCCCCCc
Q 041428 171 KKLNKLLNFAKTKPSVCQMEMHPGWRN 197 (322)
Q Consensus 171 ~~l~~~~~~~~~~~~~~q~~~~~~~~~ 197 (322)
-.+..++..... -++.+..+..+.+
T Consensus 82 vAlrDAl~~v~~--P~VEVHiSNi~aR 106 (149)
T 2uyg_A 82 YALLDAIRAQPL--PVVEVHLTNLHAR 106 (149)
T ss_dssp HHHHHHHHTSCS--CEEEEESSCGGGS
T ss_pred HHHHHHHHhCCC--CEEEEEecCcccc
Confidence 777777776544 5777877666554
No 181
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=21.68 E-value=2.3e+02 Score=25.54 Aligned_cols=146 Identities=16% Similarity=0.124 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHcCCCeEec-CCCc--CC-H--HHHHHHHHHHHhcCCCCCcEEEEecCCCCCC-ChHHHHHHHHHHHHHh
Q 041428 38 AFKSVFTAIVEGGYRHIDT-AKQY--GV-Q--ENIGLALKEAMQTGIQRKDLFVTSKLWCADL-SPDRVRSALNNTLQEL 110 (322)
Q Consensus 38 ~~~~~l~~Al~~Gi~~~DT-A~~Y--g~-e--~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~-~~~~i~~~~~~SL~~L 110 (322)
+..+..+.+++.|++.|=. =-.. .+ + ..+=+++|+.+ .+++-|..... ..+ +.+...+ +-+.|+.+
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~~~v~avR~a~-----G~d~~l~vDan-~~~~~~~~A~~-~~~~L~~~ 227 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVCIIPNDKVSDKEIVAYLRELREVI-----GWDMDMMVDCL-YRWTDWQKARW-TFRQLEDI 227 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHHHHHHHHHHH-----CSSSEEEEECT-TCCSCHHHHHH-HHHHTGGG
T ss_pred HHHHHHHHHHHcCCCEEEecccCCCccCHHHHHHHHHHHHHHh-----CCCCeEEEECC-CCCCCHHHHHH-HHHHHhhc
Confidence 3445667778889888765 1111 11 1 11223455442 23444554542 233 3333222 22234444
Q ss_pred CCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEe-cCCCHHHHHHHHhhcCCCCceece
Q 041428 111 QLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGV-CNFTLKKLNKLLNFAKTKPSVCQM 189 (322)
Q Consensus 111 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~~~q~ 189 (322)
++.++..|-+. +-++.+.++++.-.|-=.+- +-++...+.++++.... +++|+
T Consensus 228 -----~i~~iEeP~~~-------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~--d~v~~ 281 (394)
T 3mqt_A 228 -----DLYFIEACLQH-------------------DDLIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKTGI--SVVQS 281 (394)
T ss_dssp -----CCSEEESCSCT-------------------TCHHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHHCC--SEECC
T ss_pred -----CCeEEECCCCc-------------------ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCC--CeEec
Confidence 34455555331 12456777777655544433 34567888888877554 77777
Q ss_pred eeCCCCC---cHHHHHHHHHcCceEEEecc
Q 041428 190 EMHPGWR---NDKILEACKKNGIHVTAYSP 216 (322)
Q Consensus 190 ~~~~~~~---~~~ll~~~~~~gi~via~~p 216 (322)
...-.-. ...+..+|+++|+.++.++.
T Consensus 282 k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 311 (394)
T 3mqt_A 282 DYNRCGGVTELLRIMDICEHHNAQLMPHNW 311 (394)
T ss_dssp CTTTSSCHHHHHHHHHHHHHHTCEECCCCC
T ss_pred CccccCCHHHHHHHHHHHHHcCCEEeccCC
Confidence 7655432 26799999999999987653
No 182
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=21.55 E-value=1.3e+02 Score=26.32 Aligned_cols=131 Identities=15% Similarity=0.130 Sum_probs=71.5
Q ss_pred CChhHHHHHHHHHHHcCCCeEecC----------CCcCC-----HHHHHHHHHHHHhcCCCCCcEEEEecCCCCCCChHH
Q 041428 34 SGDEAFKSVFTAIVEGGYRHIDTA----------KQYGV-----QENIGLALKEAMQTGIQRKDLFVTSKLWCADLSPDR 98 (322)
Q Consensus 34 ~~~~~~~~~l~~Al~~Gi~~~DTA----------~~Yg~-----e~~lG~~l~~~~~~~~~R~~~~i~tK~~~~~~~~~~ 98 (322)
.++++..++.+.|.+. +..||.- ..||+ .+.+-+.++...+ .+ .+-|+.|+...-...+.
T Consensus 68 ~~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~-~~---~~pv~vKir~G~~~~~~ 142 (318)
T 1vhn_A 68 SEPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRK-SV---SGKFSVKTRLGWEKNEV 142 (318)
T ss_dssp SCHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHH-HC---SSEEEEEEESCSSSCCH
T ss_pred CCHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHH-hh---CCCEEEEecCCCChHHH
Confidence 4567777788888888 8887742 44662 3445555544311 11 25677786221111122
Q ss_pred HHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEecCC-CHHHHHHHH
Q 041428 99 VRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGVCNF-TLKKLNKLL 177 (322)
Q Consensus 99 i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~-~~~~l~~~~ 177 (322)
+ .+-+.++..|.++| .+|.-....... + ...|+.+.++++ .+--|+..+. +++.+.+++
T Consensus 143 ~--~~a~~l~~~G~d~i---~v~g~~~~~~~~------~-------~~~~~~i~~i~~--~ipVi~~GgI~s~~da~~~l 202 (318)
T 1vhn_A 143 E--EIYRILVEEGVDEV---FIHTRTVVQSFT------G-------RAEWKALSVLEK--RIPTFVSGDIFTPEDAKRAL 202 (318)
T ss_dssp H--HHHHHHHHTTCCEE---EEESSCTTTTTS------S-------CCCGGGGGGSCC--SSCEEEESSCCSHHHHHHHH
T ss_pred H--HHHHHHHHhCCCEE---EEcCCCccccCC------C-------CcCHHHHHHHHc--CCeEEEECCcCCHHHHHHHH
Confidence 2 55566777885554 557532211000 0 011234455555 6777888885 788888888
Q ss_pred hhcCCCCceeceee
Q 041428 178 NFAKTKPSVCQMEM 191 (322)
Q Consensus 178 ~~~~~~~~~~q~~~ 191 (322)
+..+. +.+++.-
T Consensus 203 ~~~ga--d~V~iGR 214 (318)
T 1vhn_A 203 EESGC--DGLLVAR 214 (318)
T ss_dssp HHHCC--SEEEESG
T ss_pred HcCCC--CEEEECH
Confidence 85443 5666654
No 183
>3guv_A Site-specific recombinase, resolvase family prote; structural genomics, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae}
Probab=21.25 E-value=1.1e+02 Score=23.80 Aligned_cols=51 Identities=16% Similarity=0.264 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhCCCc--cceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCccEEEe
Q 041428 100 RSALNNTLQELQLDY--LDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVRDVGV 165 (322)
Q Consensus 100 ~~~~~~SL~~Lg~d~--iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGv 165 (322)
+..+.+.|+.+.... +|.+++...++... ...++...++.|.+.| |+-+-+
T Consensus 59 Rp~l~~ll~~~~~g~~~~d~lvv~~ldRl~R--------------~~~~~~~~~~~l~~~g-v~l~~~ 111 (167)
T 3guv_A 59 RIQFNRMMEDIKSGKDGVSFVLVFKLSRFAR--------------NAADVLSTLQIMQDYG-VNLICV 111 (167)
T ss_dssp CHHHHHHHHHHHTCTTCCSEEEESCGGGTCS--------------SHHHHHHHHHHHHHTT-CEEEET
T ss_pred CHHHHHHHHHHHcCCCCccEEEEEeCchhcC--------------CHHHHHHHHHHHHHCC-CEEEEe
Confidence 345666666776555 89999998887633 4678888888888876 444433
No 184
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=21.17 E-value=95 Score=26.31 Aligned_cols=29 Identities=21% Similarity=0.245 Sum_probs=25.1
Q ss_pred cCChhHHHHHHHHHHHcCCCeEecCCCcC
Q 041428 33 KSGDEAFKSVFTAIVEGGYRHIDTAKQYG 61 (322)
Q Consensus 33 ~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg 61 (322)
..++++...+.+.|.++|..|+.|+..|+
T Consensus 153 ~Lt~eei~~a~~ia~~aGADfVKTSTGf~ 181 (239)
T 3ngj_A 153 YLTNEEKVEVCKRCVAAGAEYVKTSTGFG 181 (239)
T ss_dssp GSCHHHHHHHHHHHHHHTCSEEECCCSSS
T ss_pred CCCHHHHHHHHHHHHHHCcCEEECCCCCC
Confidence 35778888899999999999999998875
No 185
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=20.37 E-value=3.8e+02 Score=23.01 Aligned_cols=66 Identities=12% Similarity=0.184 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHhhcCCCCceeceeeCCCCCcHHHHHHHHHcCceEEEecc
Q 041428 145 EGVWREMEKLVKDGLVRDVGVCNFTLKKLNKLLNFAKTKPSVCQMEMHPGWRNDKILEACKKNGIHVTAYSP 216 (322)
Q Consensus 145 ~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~via~~p 216 (322)
.-+...++.+++.+. -|.|-++.++.++++++.+.. .+ ...+......++++.+.+.+++++.+--
T Consensus 68 ~Rv~pvi~~l~~~~v--~iSIDT~~~~Va~~al~aGa~--iI--NDVs~g~~d~~m~~~va~~~~~~vlMH~ 133 (270)
T 4hb7_A 68 NRVLPVVEAIVGFDV--KISVDTFRSEVAEACLKLGVD--MI--NDQWAGLYDHRMFQIVAKYDAEIILMHN 133 (270)
T ss_dssp HHHHHHHHHHTTSSS--EEEEECSCHHHHHHHHHHTCC--EE--EETTTTSSCTHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHhhcCCC--eEEEECCCHHHHHHHHHhccc--ee--ccccccccchhHHHHHHHcCCCeEEecc
Confidence 345566677766543 589999999999999987642 12 2234444557899999999999998763
No 186
>2jrt_A Uncharacterized protein; solution, structure, NESG, PSI, target RHR5, structural genomics, protein structure initiative; NMR {Rhodobacter sphaeroides}
Probab=20.32 E-value=66 Score=23.00 Aligned_cols=63 Identities=16% Similarity=0.207 Sum_probs=45.9
Q ss_pred eEEcCCCCccCcceeeccc---CChhHHHHHHHHHHHcCCCeEecCCCcC-CHHHHHHHHHHHHhcC
Q 041428 15 SFKLLSGHTIPAVGLGTWK---SGDEAFKSVFTAIVEGGYRHIDTAKQYG-VQENIGLALKEAMQTG 77 (322)
Q Consensus 15 ~~~l~tg~~vs~lglG~~~---~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg-~e~~lG~~l~~~~~~~ 77 (322)
++....|..+..-+++.-. .+.+.-.++|...+..+...-++|..|+ +...+-.|.+...+.|
T Consensus 11 ~~~g~~G~~~~~~~l~~~~~rrWs~~~Kl~VV~~~~~g~~s~~e~arry~Is~s~i~~W~r~~~~~G 77 (95)
T 2jrt_A 11 QVTLPDGTVLSRADLPPLDTRRWVASRKAAVVKAVIHGLITEREALDRYSLSEEEFALWRSAVAAHG 77 (95)
T ss_dssp EEECTTSCEEETTTSCCSSCCCCCHHHHHHHHHHHHTTSSCHHHHHHHTTCCHHHHHHHHHHTTTCC
T ss_pred eeeCCCCcccHHhcCChHhhhccCHHHHHHHHHHHHcCCCCHHHHHHHhCCCHHHHHHHHHHHHHHh
Confidence 4555566655555555432 4566667888888899999999999999 8889999998764433
No 187
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=20.16 E-value=3.6e+02 Score=22.05 Aligned_cols=113 Identities=12% Similarity=0.142 Sum_probs=69.1
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHHHHHhCCCccceeEeecCCCCCCCCCCCCCCCccccccHHHHHHHHHHHHHcCCcc
Q 041428 82 DLFVTSKLWCADLSPDRVRSALNNTLQELQLDYLDLYLIHWPFRLKEGASRPPKDGEVLEFDMEGVWREMEKLVKDGLVR 161 (322)
Q Consensus 82 ~~~i~tK~~~~~~~~~~i~~~~~~SL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir 161 (322)
.+.++..+.........+...+...+++.+... +-+.+--.+... ......+.+.+..|++.|-
T Consensus 94 ~~~l~iNls~~~l~~~~~~~~l~~~l~~~~~~~-~~l~lEitE~~~-------------~~~~~~~~~~l~~L~~~G~-- 157 (250)
T 4f3h_A 94 KTHLLVRIGPNSFSDPQMIDTIREQLAVYGVPG-ERLWLQTPESKV-------------FTHLRNAQQFLASVSAMGC-- 157 (250)
T ss_dssp CCEEEEECCGGGSSCHHHHHHHHHHHHHTTCCG-GGEEEEEEHHHH-------------HHSHHHHHHHHHHHHTTTC--
T ss_pred CceEEEEeCHHHhCCcHHHHHHHHHHHHcCCCc-ceEEEEEechhh-------------hcCHHHHHHHHHHHHHCCC--
Confidence 456666665555555678889999999998763 333333222110 0234678889999999997
Q ss_pred EEEecCCC--HHHHHHHHhhcCCCCceeceeeCCC---CCc-------HHHHHHHHHcCceEEE
Q 041428 162 DVGVCNFT--LKKLNKLLNFAKTKPSVCQMEMHPG---WRN-------DKILEACKKNGIHVTA 213 (322)
Q Consensus 162 ~iGvs~~~--~~~l~~~~~~~~~~~~~~q~~~~~~---~~~-------~~ll~~~~~~gi~via 213 (322)
.|.+.+|. ...+..+.. .+++.+-+.-+.. ... ..++..|+..|+.++|
T Consensus 158 ~ialDdfG~g~s~l~~L~~---l~~d~iKiD~~~v~~~~~~~~~~~~l~~i~~~a~~l~~~via 218 (250)
T 4f3h_A 158 KVGLEQFGSGLDSFQLLAH---FQPAFLKLDRSITGDIASARESQEKIREITSRAQPTGILTVA 218 (250)
T ss_dssp EEEEEEETSSTHHHHHHTT---SCCSEEEECHHHHTTTTTCSHHHHHHHHTHHHHHHHTCEEEE
T ss_pred EEEEeCCCCCchHHHHHhh---CCCCEEEECHHHHHhHhcChhhHHHHHHHHHHHHHcCCEEEE
Confidence 45555553 233333332 4455555542221 111 5689999999999998
Done!