Query 041432
Match_columns 425
No_of_seqs 196 out of 784
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 11:37:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041432.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041432hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h08_A Putative hydrolase; GDS 81.0 1.5 5.1E-05 38.5 4.5 51 236-312 74-124 (200)
2 4hf7_A Putative acylhydrolase; 71.6 1.3 4.3E-05 39.6 1.3 15 143-157 25-39 (209)
3 3hp4_A GDSL-esterase; psychrot 69.3 1.4 4.9E-05 37.8 1.1 37 236-294 66-102 (185)
4 3rjt_A Lipolytic protein G-D-S 61.4 2.8 9.5E-05 36.4 1.4 26 277-306 112-137 (216)
5 1ivn_A Thioesterase I; hydrola 53.1 3.9 0.00013 35.3 0.9 27 277-307 81-107 (190)
6 3mil_A Isoamyl acetate-hydroly 52.1 3.6 0.00012 36.5 0.6 29 277-309 95-123 (240)
7 1yzf_A Lipase/acylhydrolase; s 51.0 4.2 0.00014 34.6 0.7 28 277-310 88-115 (195)
8 2q0q_A ARYL esterase; SGNH hyd 48.4 4.8 0.00016 35.2 0.7 19 277-295 104-122 (216)
9 2hsj_A Putative platelet activ 45.4 7.5 0.00026 33.9 1.5 33 277-311 104-136 (214)
10 3dci_A Arylesterase; SGNH_hydr 45.1 5.8 0.0002 35.7 0.7 18 277-294 122-139 (232)
11 1fxw_F Alpha2, platelet-activa 43.7 13 0.00044 33.2 2.9 32 277-310 111-142 (229)
12 3dc7_A Putative uncharacterize 43.0 8.3 0.00028 34.3 1.4 17 141-157 18-34 (232)
13 1vjg_A Putative lipase from th 42.2 6.2 0.00021 34.8 0.4 29 277-310 112-140 (218)
14 3bzw_A Putative lipase; protei 39.5 10 0.00034 35.1 1.5 16 142-157 24-39 (274)
15 1es9_A PAF-AH, platelet-activa 39.1 11 0.00036 33.7 1.5 32 277-310 110-141 (232)
16 4h08_A Putative hydrolase; GDS 38.8 84 0.0029 26.8 7.4 37 117-167 3-43 (200)
17 3p94_A GDSL-like lipase; serin 38.8 9.1 0.00031 32.9 1.0 31 277-311 96-126 (204)
18 2vpt_A Lipolytic enzyme; ester 35.8 11 0.00038 33.2 1.1 13 145-157 6-18 (215)
19 2waa_A Acetyl esterase, xylan 33.3 13 0.00043 36.2 1.1 48 236-306 225-272 (347)
20 2w9x_A AXE2A, CJCE2B, putative 33.0 14 0.00049 36.1 1.4 28 277-306 266-293 (366)
21 1fll_X B-cell surface antigen 32.0 24 0.00081 21.7 1.7 12 393-404 5-16 (26)
22 2wao_A Endoglucanase E; plant 30.5 14 0.00048 35.6 0.9 49 235-306 212-260 (341)
23 1k7c_A Rhamnogalacturonan acet 25.8 21 0.00073 32.2 1.2 28 278-309 108-135 (233)
24 1vcc_A DNA topoisomerase I; DN 25.5 11 0.00038 29.1 -0.7 15 145-159 55-70 (77)
25 3skv_A SSFX3; jelly roll, GDSL 25.1 24 0.00082 35.2 1.5 30 278-309 264-293 (385)
26 2o14_A Hypothetical protein YX 24.1 27 0.00093 34.4 1.7 26 277-306 251-276 (375)
27 3grf_A Ornithine carbamoyltran 21.6 44 0.0015 32.8 2.5 27 141-168 158-184 (328)
28 3r7f_A Aspartate carbamoyltran 21.3 42 0.0014 32.7 2.3 27 142-168 145-171 (304)
29 3tpf_A Otcase, ornithine carba 21.3 44 0.0015 32.5 2.4 25 142-168 143-168 (307)
No 1
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=81.00 E-value=1.5 Score=38.51 Aligned_cols=51 Identities=12% Similarity=0.163 Sum_probs=33.6
Q ss_pred CccEEEEecccccceeheeecCCeEeeeecCCCCCccccChHHHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCCC
Q 041432 236 TIDYVVISNGLWFFRQIYLYKGDTVVGCVDCEEPNVTKVSPSGAIQMALRTALVYINGCKECRGIVTVVRTFSPTHF 312 (425)
Q Consensus 236 ~~DvLVfNtGhWw~r~~~~~~~g~~vg~~~~~~~~~~~~~~~~Ay~~al~t~~~wv~~~~~~~~~vvffRt~SP~Hf 312 (425)
.+|+|||+.|.. .. ....+.|+..|++.++.+.+..+ ...+ +|-+..|...
T Consensus 74 ~pd~Vvi~~G~N-----D~-------------------~~~~~~~~~~l~~ii~~l~~~~p-~~~i-i~~~~~P~~~ 124 (200)
T 4h08_A 74 KFDVIHFNNGLH-----GF-------------------DYTEEEYDKSFPKLIKIIRKYAP-KAKL-IWANTTPVRT 124 (200)
T ss_dssp CCSEEEECCCSS-----CT-------------------TSCHHHHHHHHHHHHHHHHHHCT-TCEE-EEECCCCCEE
T ss_pred CCCeEEEEeeeC-----CC-------------------CCCHHHHHHHHHHHHHHHhhhCC-CccE-EEeccCCCcc
Confidence 489999999853 10 01246788899998888865432 3344 7888777543
No 2
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=71.61 E-value=1.3 Score=39.62 Aligned_cols=15 Identities=13% Similarity=0.645 Sum_probs=12.8
Q ss_pred cCCcEEEEecchhHH
Q 041432 143 RGNKMAFIGDSVSMN 157 (425)
Q Consensus 143 RgKri~FVGDSl~Rn 157 (425)
.+++|+|+|||++..
T Consensus 25 ~~~~Iv~~GDSit~g 39 (209)
T 4hf7_A 25 KEKRVVFMGNXITEG 39 (209)
T ss_dssp GGCCEEEEESHHHHH
T ss_pred CCCeEEEECcHHHhC
Confidence 468999999999964
No 3
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=69.35 E-value=1.4 Score=37.75 Aligned_cols=37 Identities=16% Similarity=0.062 Sum_probs=25.0
Q ss_pred CccEEEEecccccceeheeecCCeEeeeecCCCCCccccChHHHHHHHHHHHHHHHhcC
Q 041432 236 TIDYVVISNGLWFFRQIYLYKGDTVVGCVDCEEPNVTKVSPSGAIQMALRTALVYINGC 294 (425)
Q Consensus 236 ~~DvLVfNtGhWw~r~~~~~~~g~~vg~~~~~~~~~~~~~~~~Ay~~al~t~~~wv~~~ 294 (425)
.+|+||+..|.- .... + ...+.|+..++..++.+.+.
T Consensus 66 ~pd~vvi~~G~N-----D~~~-~----------------~~~~~~~~~~~~~i~~~~~~ 102 (185)
T 3hp4_A 66 EPTHVLIELGAN-----DGLR-G----------------FPVKKMQTNLTALVKKSQAA 102 (185)
T ss_dssp CCSEEEEECCHH-----HHHT-T----------------CCHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEeecc-----cCCC-C----------------cCHHHHHHHHHHHHHHHHHc
Confidence 489999999942 1111 0 12478888999998888654
No 4
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=61.37 E-value=2.8 Score=36.43 Aligned_cols=26 Identities=8% Similarity=-0.031 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEEEE
Q 041432 277 SGAIQMALRTALVYINGCKECRGIVTVVRT 306 (425)
Q Consensus 277 ~~Ay~~al~t~~~wv~~~~~~~~~vvffRt 306 (425)
.+.|+..++.+++.+.+. ...+ ++-|
T Consensus 112 ~~~~~~~l~~~i~~~~~~---~~~v-il~~ 137 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTKPR---VREM-FLLS 137 (216)
T ss_dssp HHHHHHHHHHHHHHHGGG---SSEE-EEEC
T ss_pred HHHHHHHHHHHHHHHHhc---CCeE-EEEC
Confidence 678999999999888654 3444 4544
No 5
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=53.06 E-value=3.9 Score=35.33 Aligned_cols=27 Identities=11% Similarity=0.145 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEEEEc
Q 041432 277 SGAIQMALRTALVYINGCKECRGIVTVVRTF 307 (425)
Q Consensus 277 ~~Ay~~al~t~~~wv~~~~~~~~~vvffRt~ 307 (425)
.+.|+..++..++.+.+. ...+ ++-++
T Consensus 81 ~~~~~~~l~~li~~~~~~---~~~v-il~~~ 107 (190)
T 1ivn_A 81 PQQTEQTLRQILQDVKAA---NAEP-LLMQI 107 (190)
T ss_dssp HHHHHHHHHHHHHHHHHT---TCEE-EEECC
T ss_pred HHHHHHHHHHHHHHHHHc---CCCE-EEEec
Confidence 467888888888888654 2345 55443
No 6
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=52.09 E-value=3.6 Score=36.47 Aligned_cols=29 Identities=3% Similarity=-0.091 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEEEEcCC
Q 041432 277 SGAIQMALRTALVYINGCKECRGIVTVVRTFSP 309 (425)
Q Consensus 277 ~~Ay~~al~t~~~wv~~~~~~~~~vvffRt~SP 309 (425)
.+.|+..++.+++.+.+. ...+ ++-+..|
T Consensus 95 ~~~~~~~l~~~i~~~~~~---~~~v-il~~~~p 123 (240)
T 3mil_A 95 LPEFIDNIRQMVSLMKSY---HIRP-IIIGPGL 123 (240)
T ss_dssp HHHHHHHHHHHHHHHHHT---TCEE-EEECCCC
T ss_pred HHHHHHHHHHHHHHHHHc---CCeE-EEEcCCC
Confidence 567888888888888654 2344 6666555
No 7
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=51.01 E-value=4.2 Score=34.64 Aligned_cols=28 Identities=18% Similarity=0.102 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCC
Q 041432 277 SGAIQMALRTALVYINGCKECRGIVTVVRTFSPT 310 (425)
Q Consensus 277 ~~Ay~~al~t~~~wv~~~~~~~~~vvffRt~SP~ 310 (425)
.+.|+..++..++.+. ...+ ++-+..|.
T Consensus 88 ~~~~~~~l~~~i~~~~-----~~~v-i~~~~~p~ 115 (195)
T 1yzf_A 88 VATFRENLETMIHEIG-----SEKV-ILITPPYA 115 (195)
T ss_dssp HHHHHHHHHHHHHHHC-----GGGE-EEECCCCC
T ss_pred HHHHHHHHHHHHHHhc-----CCEE-EEEcCCCC
Confidence 4678888888887775 3445 66666664
No 8
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=48.40 E-value=4.8 Score=35.18 Aligned_cols=19 Identities=5% Similarity=0.055 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHhcCC
Q 041432 277 SGAIQMALRTALVYINGCK 295 (425)
Q Consensus 277 ~~Ay~~al~t~~~wv~~~~ 295 (425)
.+.|+..++.+++.+.+..
T Consensus 104 ~~~~~~~l~~li~~~~~~~ 122 (216)
T 2q0q_A 104 PLDIALGMSVLVTQVLTSA 122 (216)
T ss_dssp HHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 5678889999988886653
No 9
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=45.39 E-value=7.5 Score=33.93 Aligned_cols=33 Identities=6% Similarity=-0.015 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCC
Q 041432 277 SGAIQMALRTALVYINGCKECRGIVTVVRTFSPTH 311 (425)
Q Consensus 277 ~~Ay~~al~t~~~wv~~~~~~~~~vvffRt~SP~H 311 (425)
.+.|+..++..++.+.+..+ ...+ ++-+..|..
T Consensus 104 ~~~~~~~l~~~i~~l~~~~p-~~~i-il~~~~p~~ 136 (214)
T 2hsj_A 104 VNEALNNLEAIIQSVARDYP-LTEI-KLLSILPVN 136 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHCT-TCEE-EEECCCCCC
T ss_pred HHHHHHHHHHHHHHHHHhCC-CCeE-EEEecCCCC
Confidence 46788888888888865432 3444 777776654
No 10
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=45.09 E-value=5.8 Score=35.67 Aligned_cols=18 Identities=11% Similarity=0.082 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 041432 277 SGAIQMALRTALVYINGC 294 (425)
Q Consensus 277 ~~Ay~~al~t~~~wv~~~ 294 (425)
.+.|+..|+.+++.+.+.
T Consensus 122 ~~~~~~~l~~li~~ir~~ 139 (232)
T 3dci_A 122 AEAAVSGMRRLAQIVETF 139 (232)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 577899999999888654
No 11
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=43.69 E-value=13 Score=33.23 Aligned_cols=32 Identities=13% Similarity=0.236 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCC
Q 041432 277 SGAIQMALRTALVYINGCKECRGIVTVVRTFSPT 310 (425)
Q Consensus 277 ~~Ay~~al~t~~~wv~~~~~~~~~vvffRt~SP~ 310 (425)
.+.|...++.+++.+.+..+ ...+ ++-+..|.
T Consensus 111 ~~~~~~~l~~~i~~l~~~~p-~~~i-il~~~~p~ 142 (229)
T 1fxw_F 111 AEEVAGGIEAIVQLINTRQP-QAKI-IVLGLLPR 142 (229)
T ss_dssp HHHHHHHHHHHHHHHHHHCT-TCEE-EEECCCCC
T ss_pred HHHHHHHHHHHHHHHHHHCC-CCeE-EEEeCCCC
Confidence 46788888888888765422 2344 67666654
No 12
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=42.99 E-value=8.3 Score=34.33 Aligned_cols=17 Identities=35% Similarity=0.546 Sum_probs=13.7
Q ss_pred HHcCCcEEEEecchhHH
Q 041432 141 MVRGNKMAFIGDSVSMN 157 (425)
Q Consensus 141 ~lRgKri~FVGDSl~Rn 157 (425)
.+..++|+|+|||++..
T Consensus 18 ~~~~~~i~~lGDSit~G 34 (232)
T 3dc7_A 18 HVSFKRPAWLGDSITAN 34 (232)
T ss_dssp CBCCSSEEEEESTTTST
T ss_pred CCCcceEEEEccccccc
Confidence 34568999999999864
No 13
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=42.15 E-value=6.2 Score=34.80 Aligned_cols=29 Identities=14% Similarity=-0.009 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCC
Q 041432 277 SGAIQMALRTALVYINGCKECRGIVTVVRTFSPT 310 (425)
Q Consensus 277 ~~Ay~~al~t~~~wv~~~~~~~~~vvffRt~SP~ 310 (425)
.+.|+..++..++.+.+. ..+ ++-+..|.
T Consensus 112 ~~~~~~~l~~li~~l~~~----~~i-il~~~~p~ 140 (218)
T 1vjg_A 112 IAETIKNTREILTQAKKL----YPV-LMISPAPY 140 (218)
T ss_dssp HHHHHHHHHHHHHHHHHH----SCE-EEECCCCC
T ss_pred HHHHHHHHHHHHHHHHHh----CcE-EEECCCCc
Confidence 567888888888887554 345 66666544
No 14
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=39.46 E-value=10 Score=35.10 Aligned_cols=16 Identities=38% Similarity=0.727 Sum_probs=13.2
Q ss_pred HcCCcEEEEecchhHH
Q 041432 142 VRGNKMAFIGDSVSMN 157 (425)
Q Consensus 142 lRgKri~FVGDSl~Rn 157 (425)
..+++|+|+|||++..
T Consensus 24 ~~~~~iv~lGDSiT~G 39 (274)
T 3bzw_A 24 WQGKKVGYIGDSITDP 39 (274)
T ss_dssp TTTCEEEEEESTTTCT
T ss_pred CCCCEEEEEecCcccC
Confidence 4568999999999853
No 15
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=39.08 E-value=11 Score=33.73 Aligned_cols=32 Identities=16% Similarity=0.257 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCC
Q 041432 277 SGAIQMALRTALVYINGCKECRGIVTVVRTFSPT 310 (425)
Q Consensus 277 ~~Ay~~al~t~~~wv~~~~~~~~~vvffRt~SP~ 310 (425)
.+.|...++..++.+.+..+ ...+ ++-+..|.
T Consensus 110 ~~~~~~~l~~~i~~l~~~~p-~~~i-i~~~~~p~ 141 (232)
T 1es9_A 110 AEQVTGGIKAIVQLVNERQP-QARV-VVLGLLPR 141 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHST-TCEE-EEECCCCC
T ss_pred HHHHHHHHHHHHHHHHHHCC-CCeE-EEecCCCC
Confidence 46788888888888765422 3344 77777664
No 16
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=38.82 E-value=84 Score=26.84 Aligned_cols=37 Identities=24% Similarity=0.658 Sum_probs=24.1
Q ss_pred cCcee--eeeCC--CCCCCCCCHHHHHHHHcCCcEEEEecchhHHHHHHHHHhhc
Q 041432 117 DFLNW--RWKPY--ACNLPKFDPRIFLDMVRGNKMAFIGDSVSMNQVESLVCLLS 167 (425)
Q Consensus 117 ~yl~W--RWqP~--~C~Lprfd~~~fL~~lRgKri~FVGDSl~Rnq~~SL~CLL~ 167 (425)
+|..| .|.|. .=++| ||+|+|||++..-...|..+|.
T Consensus 3 ~~~ew~~~~~p~~~~~~~p--------------rVl~iGDSit~G~~~~l~~~l~ 43 (200)
T 4h08_A 3 EYIEWSDIWIPGANKTDLP--------------HVLLIGNSITRGYYGKVEAALK 43 (200)
T ss_dssp SSCCCEEEECTTTTCCSSC--------------EEEEEESHHHHHHHHHHHHHTT
T ss_pred ceeehhhhccCCcccCCCC--------------eEEEEchhHHhhhHHHHHHHhc
Confidence 67777 47774 34454 6999999999764444444443
No 17
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=38.77 E-value=9.1 Score=32.94 Aligned_cols=31 Identities=10% Similarity=-0.043 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCC
Q 041432 277 SGAIQMALRTALVYINGCKECRGIVTVVRTFSPTH 311 (425)
Q Consensus 277 ~~Ay~~al~t~~~wv~~~~~~~~~vvffRt~SP~H 311 (425)
.+.|+..++.+++.+.+ ....+ ++-+..|..
T Consensus 96 ~~~~~~~~~~~i~~~~~---~~~~v-il~~~~p~~ 126 (204)
T 3p94_A 96 LENVFGNLVSMAELAKA---NHIKV-IFCSVLPAY 126 (204)
T ss_dssp HHHHHHHHHHHHHHHHH---TTCEE-EEECCCCCS
T ss_pred HHHHHHHHHHHHHHHHh---CCCeE-EEEeCCCCC
Confidence 56788888888888765 23344 777776654
No 18
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=35.75 E-value=11 Score=33.20 Aligned_cols=13 Identities=31% Similarity=0.383 Sum_probs=11.3
Q ss_pred CcEEEEecchhHH
Q 041432 145 NKMAFIGDSVSMN 157 (425)
Q Consensus 145 Kri~FVGDSl~Rn 157 (425)
.+|+|+|||++..
T Consensus 6 ~~i~~~GDSit~G 18 (215)
T 2vpt_A 6 IKIMPVGDSCTEG 18 (215)
T ss_dssp EEEEEEESHHHHT
T ss_pred eEEEecccccccC
Confidence 5899999999864
No 19
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=33.28 E-value=13 Score=36.21 Aligned_cols=48 Identities=6% Similarity=0.039 Sum_probs=28.5
Q ss_pred CccEEEEecccccceeheeecCCeEeeeecCCCCCccccChHHHHHHHHHHHHHHHhcCCCCCceEEEEEE
Q 041432 236 TIDYVVISNGLWFFRQIYLYKGDTVVGCVDCEEPNVTKVSPSGAIQMALRTALVYINGCKECRGIVTVVRT 306 (425)
Q Consensus 236 ~~DvLVfNtGhWw~r~~~~~~~g~~vg~~~~~~~~~~~~~~~~Ay~~al~t~~~wv~~~~~~~~~vvffRt 306 (425)
.+|+||++.|. +++.. .....+.|+.+++.+++.+.+..+ +..+ ++-+
T Consensus 225 ~Pd~VvI~lG~-----ND~~~----------------~~~~~~~~~~~l~~li~~ir~~~p-~~~I-~l~~ 272 (347)
T 2waa_A 225 QPDLIISAIGT-----NDFSP----------------GIPDRATYINTYTRFVRTLLDNHP-QATI-VLTE 272 (347)
T ss_dssp CCSEEEECCCH-----HHHSS----------------SCCCHHHHHHHHHHHHHHHHHHCT-TCEE-EECC
T ss_pred CCCEEEEEccc-----cCCCC----------------CCCcHHHHHHHHHHHHHHHHHHCC-CCEE-EEEe
Confidence 47999999982 22211 012246788888888888865322 3344 4433
No 20
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=32.97 E-value=14 Score=36.10 Aligned_cols=28 Identities=4% Similarity=0.020 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEEEE
Q 041432 277 SGAIQMALRTALVYINGCKECRGIVTVVRT 306 (425)
Q Consensus 277 ~~Ay~~al~t~~~wv~~~~~~~~~vvffRt 306 (425)
.+.|+.+++.+++.+.+..+ +..+ ++-+
T Consensus 266 ~~~~~~~l~~li~~ir~~~p-~a~I-il~~ 293 (366)
T 2w9x_A 266 HADYVANYVKFVKQLHSNNA-RAQF-ILMN 293 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHCT-TCEE-EEEE
T ss_pred HHHHHHHHHHHHHHHHHHCC-CCeE-EEEe
Confidence 46788899999888865432 3344 5544
No 21
>1fll_X B-cell surface antigen CD40; TRAF3 with CD40 peptide, TNF signaling, apoptosis; 3.50A {Homo sapiens}
Probab=31.99 E-value=24 Score=21.75 Aligned_cols=12 Identities=25% Similarity=0.332 Sum_probs=9.8
Q ss_pred CCCCcccccCCC
Q 041432 393 DFRDCLHWCLPG 404 (425)
Q Consensus 393 ~~~DC~HWCLPG 404 (425)
..+|-+|||+|-
T Consensus 5 pvqeTl~~~qPV 16 (26)
T 1fll_X 5 PVQETLHGSQPV 16 (26)
T ss_dssp CCCCCCCCSSSC
T ss_pred ChhHHhhcCccc
Confidence 357999999994
No 22
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=30.51 E-value=14 Score=35.64 Aligned_cols=49 Identities=10% Similarity=0.023 Sum_probs=29.4
Q ss_pred CCccEEEEecccccceeheeecCCeEeeeecCCCCCccccChHHHHHHHHHHHHHHHhcCCCCCceEEEEEE
Q 041432 235 QTIDYVVISNGLWFFRQIYLYKGDTVVGCVDCEEPNVTKVSPSGAIQMALRTALVYINGCKECRGIVTVVRT 306 (425)
Q Consensus 235 ~~~DvLVfNtGhWw~r~~~~~~~g~~vg~~~~~~~~~~~~~~~~Ay~~al~t~~~wv~~~~~~~~~vvffRt 306 (425)
..+|+||++.|. +.+... ....+.|+.+++.+++.+.+..+ +..+ ++-+
T Consensus 212 ~~PdlVvI~lGt-----ND~~~~----------------~~~~~~~~~~l~~li~~ir~~~p-~a~I-il~~ 260 (341)
T 2wao_A 212 YVPQVVVINLGT-----NDFSTS----------------FADKTKFVTAYKNLISEVRRNYP-DAHI-FCCV 260 (341)
T ss_dssp CCCSEEEEECCH-----HHHSSS----------------CCCHHHHHHHHHHHHHHHHHHCT-TCEE-EEEE
T ss_pred CCCCEEEEeCcc-----ccCCCC----------------CCCHHHHHHHHHHHHHHHHHHCC-CCeE-EEEe
Confidence 347999999982 322110 01246788888888888865332 3444 5555
No 23
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=25.83 E-value=21 Score=32.18 Aligned_cols=28 Identities=14% Similarity=0.135 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCceEEEEEEcCC
Q 041432 278 GAIQMALRTALVYINGCKECRGIVTVVRTFSP 309 (425)
Q Consensus 278 ~Ay~~al~t~~~wv~~~~~~~~~vvffRt~SP 309 (425)
+.|+..|+.+++.+.+. ...+ ++-|..|
T Consensus 108 ~~~~~~l~~~i~~~~~~---g~~v-il~tp~p 135 (233)
T 1k7c_A 108 LTFPAYLENAAKLFTAK---GAKV-ILSSQTP 135 (233)
T ss_dssp EBHHHHHHHHHHHHHHT---TCEE-EEECCCC
T ss_pred HHHHHHHHHHHHHHHHC---CCEE-EEECCCC
Confidence 45788888887776542 1344 5555544
No 24
>1vcc_A DNA topoisomerase I; DNA binding; HET: DNA; 1.60A {Vaccinia virus} SCOP: d.121.1.1
Probab=25.46 E-value=11 Score=29.08 Aligned_cols=15 Identities=33% Similarity=0.616 Sum_probs=11.7
Q ss_pred CcEEEEe-cchhHHHH
Q 041432 145 NKMAFIG-DSVSMNQV 159 (425)
Q Consensus 145 Kri~FVG-DSl~Rnq~ 159 (425)
.+|+||| ||-+|.||
T Consensus 55 ~~lIfvG~DSKgrkQY 70 (77)
T 1vcc_A 55 TRLIFVGSDSKGRRQY 70 (77)
T ss_dssp TSEEEEEECTTSCEEE
T ss_pred CceEEEeecCCCceee
Confidence 4699999 88887664
No 25
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP}
Probab=25.06 E-value=24 Score=35.24 Aligned_cols=30 Identities=10% Similarity=-0.088 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCceEEEEEEcCC
Q 041432 278 GAIQMALRTALVYINGCKECRGIVTVVRTFSP 309 (425)
Q Consensus 278 ~Ay~~al~t~~~wv~~~~~~~~~vvffRt~SP 309 (425)
+.|+..++.+++.|.+..+ ...+ ++-+.-|
T Consensus 264 ~~~~~~l~~li~~ir~~~P-~a~I-llv~p~~ 293 (385)
T 3skv_A 264 VDFPANLVGFVQIIRERHP-LTPI-VLGSSVY 293 (385)
T ss_dssp TTHHHHHHHHHHHHHTTCS-SSCE-EEEECCC
T ss_pred HHHHHHHHHHHHHHHHHCC-CCcE-EEEcCCC
Confidence 4577788888887765432 2344 5655543
No 26
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=24.14 E-value=27 Score=34.40 Aligned_cols=26 Identities=12% Similarity=0.196 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEEEE
Q 041432 277 SGAIQMALRTALVYINGCKECRGIVTVVRT 306 (425)
Q Consensus 277 ~~Ay~~al~t~~~wv~~~~~~~~~vvffRt 306 (425)
.+.|+..|+.+++.+.+. ...+ ++-|
T Consensus 251 ~~~~~~~l~~ii~~lr~~---~a~v-ilvt 276 (375)
T 2o14_A 251 EAEFKEVMRDMIRQVKAK---GADV-ILST 276 (375)
T ss_dssp HHHHHHHHHHHHHHHHTT---TCEE-EEEC
T ss_pred HHHHHHHHHHHHHHHHHC---CCEE-EEEC
Confidence 567888899888888654 2345 5544
No 27
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=21.55 E-value=44 Score=32.82 Aligned_cols=27 Identities=30% Similarity=0.333 Sum_probs=23.0
Q ss_pred HHcCCcEEEEecchhHHHHHHHHHhhcc
Q 041432 141 MVRGNKMAFIGDSVSMNQVESLVCLLSK 168 (425)
Q Consensus 141 ~lRgKri~FVGDSl~Rnq~~SL~CLL~~ 168 (425)
.+.|++|+||||-.+ |.-.|++.+|..
T Consensus 158 ~l~gl~va~vGD~~~-~va~Sl~~~~~~ 184 (328)
T 3grf_A 158 GFKGIKFAYCGDSMN-NVTYDLMRGCAL 184 (328)
T ss_dssp TGGGCCEEEESCCSS-HHHHHHHHHHHH
T ss_pred ccCCcEEEEeCCCCc-chHHHHHHHHHH
Confidence 467899999999866 699999988874
No 28
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=21.26 E-value=42 Score=32.65 Aligned_cols=27 Identities=19% Similarity=0.246 Sum_probs=22.8
Q ss_pred HcCCcEEEEecchhHHHHHHHHHhhcc
Q 041432 142 VRGNKMAFIGDSVSMNQVESLVCLLSK 168 (425)
Q Consensus 142 lRgKri~FVGDSl~Rnq~~SL~CLL~~ 168 (425)
++|++|+||||-..-|.-.|++.++..
T Consensus 145 l~glkva~vGD~~~~rva~Sl~~~~~~ 171 (304)
T 3r7f_A 145 FKGLTVSIHGDIKHSRVARSNAEVLTR 171 (304)
T ss_dssp CTTCEEEEESCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCcchHHHHHHHHHH
Confidence 578999999997766789999988874
No 29
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=21.25 E-value=44 Score=32.54 Aligned_cols=25 Identities=32% Similarity=0.304 Sum_probs=21.2
Q ss_pred Hc-CCcEEEEecchhHHHHHHHHHhhcc
Q 041432 142 VR-GNKMAFIGDSVSMNQVESLVCLLSK 168 (425)
Q Consensus 142 lR-gKri~FVGDSl~Rnq~~SL~CLL~~ 168 (425)
++ |++|+|||| . -|.-.|++.+|..
T Consensus 143 l~~gl~va~vGD-~-~~va~Sl~~~~~~ 168 (307)
T 3tpf_A 143 QNGIAKVAFIGD-S-NNMCNSWLITAAI 168 (307)
T ss_dssp GGGCCEEEEESC-S-SHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcC-C-CccHHHHHHHHHH
Confidence 56 999999999 3 5799999988874
Done!