BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041433
(470 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 138/242 (57%), Gaps = 25/242 (10%)
Query: 244 RRKAKKKYNAVPEGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLP 303
R+K + + VP D ++ + +F ++VA++ FS N LG GGFG+VYKG L
Sbjct: 2 RKKPQDHFFDVP-AEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 304 SGREIAVKRLSKSSGQGAE-EFKNEVVVVAKLQHRNLVRLLGFCL--------------- 347
G +AVKRL + QG E +F+ EV +++ HRNL+RL GFC+
Sbjct: 61 DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 120
Query: 348 -------EDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMN 400
E PE Q LDW +R +I ARG+ YLH+ +IIHRD+K +NILLD E
Sbjct: 121 SVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 180
Query: 401 PKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
+ DFG+AK+ + + GT G++APEY G+ S K+DV+ +GV++LE+ITG
Sbjct: 181 AVVGDFGLAKLMDYKDXHVXXA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG 239
Query: 461 KK 462
++
Sbjct: 240 QR 241
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 125/216 (57%), Gaps = 24/216 (11%)
Query: 270 QFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAE-EFKNEV 328
+F ++VA++ F N LG GGFG+VYKG L G +AVKRL + QG E +F+ EV
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 329 VVVAKLQHRNLVRLLGFCL----------------------EDPEKQGQLDWSRRYKIIG 366
+++ HRNL+RL GFC+ E PE Q LDW +R +I
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 138
Query: 367 LIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAG 426
ARG+ YLH+ +IIHRD+K +NILLD E + DFG+AK+ + + G
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRG 197
Query: 427 TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKK 462
G++APEY G+ S K+DV+ +GV++LE+ITG++
Sbjct: 198 XIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 233
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/224 (41%), Positives = 115/224 (51%), Gaps = 42/224 (18%)
Query: 271 FDFEAIKVATNKFST------DNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEE- 323
F F +K TN F NK+G GGFG VYKG + + +AVK+L+ EE
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 324 ---FKNEVVVVAKLQHRNLVRLLGF------------------------CLEDPEKQGQL 356
F E+ V+AK QH NLV LLGF CL+ L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP---L 130
Query: 357 DWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQ 416
W R KI A GI +LHE+ IHRD+K +NILLD KISDFG+A+
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 417 TQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
SRI GT YMAPE A+ G+ + KSD+YSFGV++LEIITG
Sbjct: 188 QTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 114/224 (50%), Gaps = 42/224 (18%)
Query: 271 FDFEAIKVATNKFST------DNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEE- 323
F F +K TN F NK+G GGFG VYKG + + +AVK+L+ EE
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 324 ---FKNEVVVVAKLQHRNLVRLLGF------------------------CLEDPEKQGQL 356
F E+ V+AK QH NLV LLGF CL+ L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP---L 130
Query: 357 DWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQ 416
W R KI A GI +LHE+ IHRD+K +NILLD KISDFG+A+
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 417 TQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
RI GT YMAPE A+ G+ + KSD+YSFGV++LEIITG
Sbjct: 188 QTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 114/224 (50%), Gaps = 42/224 (18%)
Query: 271 FDFEAIKVATNKFST------DNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEE- 323
F F +K TN F NK+G GGFG VYKG + + +AVK+L+ EE
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 324 ---FKNEVVVVAKLQHRNLVRLLGF------------------------CLEDPEKQGQL 356
F E+ V+AK QH NLV LLGF CL+ L
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP---L 124
Query: 357 DWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQ 416
W R KI A GI +LHE+ IHRD+K +NILLD KISDFG+A+
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 417 TQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
RI GT YMAPE A+ G+ + KSD+YSFGV++LEIITG
Sbjct: 182 QXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 112/224 (50%), Gaps = 42/224 (18%)
Query: 271 FDFEAIKVATNKFST------DNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEE- 323
F F +K TN F NK G GGFG VYKG + + +AVK+L+ EE
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 324 ---FKNEVVVVAKLQHRNLVRLLGF------------------------CLEDPEKQGQL 356
F E+ V AK QH NLV LLGF CL+ L
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP---L 121
Query: 357 DWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQ 416
W R KI A GI +LHE+ IHRD+K +NILLD KISDFG+A+
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 417 TQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
SRI GT Y APE A+ G+ + KSD+YSFGV++LEIITG
Sbjct: 179 QXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 131/239 (54%), Gaps = 27/239 (11%)
Query: 246 KAKKKYNAVPEGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSG 305
K K N++ + + + L ES + ++ ATN F +G G FG+VYKGVL G
Sbjct: 4 KYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG 63
Query: 306 REIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPE--------KQGQL- 356
++A+KR + S QG EEF+ E+ ++ +H +LV L+GFC E E + G L
Sbjct: 64 AKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123
Query: 357 -------------DWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKI 403
W +R +I ARG+ YLH + IIHRD+K NILLD PKI
Sbjct: 124 RHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKI 180
Query: 404 SDFGMAKI-FGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
+DFG++K +DQT + GT GY+ PEY + G+ + KSDVYSFGV++ E++ +
Sbjct: 181 TDFGISKKGTELDQTHLXXV-VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 131/239 (54%), Gaps = 27/239 (11%)
Query: 246 KAKKKYNAVPEGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSG 305
K K N++ + + + L ES + ++ ATN F +G G FG+VYKGVL G
Sbjct: 4 KYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG 63
Query: 306 REIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPE--------KQGQL- 356
++A+KR + S QG EEF+ E+ ++ +H +LV L+GFC E E + G L
Sbjct: 64 AKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123
Query: 357 -------------DWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKI 403
W +R +I ARG+ YLH + IIHRD+K NILLD PKI
Sbjct: 124 RHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKI 180
Query: 404 SDFGMAKIFGVDQTQGNTSRIA-GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
+DFG++K G + Q + + GT GY+ PEY + G+ + KSDVYSFGV++ E++ +
Sbjct: 181 TDFGISKK-GTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 112/222 (50%), Gaps = 41/222 (18%)
Query: 269 LQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRL----SKSSGQGAEEF 324
L+ DF + + + +G GGFG+VY+ G E+AVK + Q E
Sbjct: 2 LEIDFA-------ELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENV 53
Query: 325 KNEVVVVAKLQHRNLVRLLGFCLEDPE--------KQGQLDWSRRYKIIGL--------- 367
+ E + A L+H N++ L G CL++P + G L+ K I
Sbjct: 54 RQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ 113
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNP--------KISDFGMAKIFGVDQTQG 419
IARG+ YLH+++ + IIHRDLK SNIL+ ++ KI+DFG+A+ + +
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRT 169
Query: 420 NTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
AG Y +MAPE FS SDV+S+GVL+ E++TG+
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 113/228 (49%), Gaps = 31/228 (13%)
Query: 259 ADNDLTTLESLQF----DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLS 314
+D D+ T E+L F D + + + + K+GAG FG V++ G ++AVK L
Sbjct: 11 SDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILM 69
Query: 315 KSS--GQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDP------------------EKQG 354
+ + EF EV ++ +L+H N+V +G + P K G
Sbjct: 70 EQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSG 129
Query: 355 ---QLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKI 411
QLD RR + +A+G+ YLH + I+HRDLK N+L+D + K+ DFG++++
Sbjct: 130 AREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL 188
Query: 412 FGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ AGT +MAPE + KSDVYSFGV++ E+ T
Sbjct: 189 KASXFLXSKXA--AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 115/228 (50%), Gaps = 31/228 (13%)
Query: 259 ADNDLTTLESLQF----DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLS 314
+D D+ T E+L F D + + + + K+GAG FG V++ G ++AVK L
Sbjct: 11 SDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILM 69
Query: 315 KSS--GQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDP------------------EKQG 354
+ + EF EV ++ +L+H N+V +G + P K G
Sbjct: 70 EQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSG 129
Query: 355 ---QLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKI 411
QLD RR + +A+G+ YLH + I+HR+LK N+L+D + K+ DFG++++
Sbjct: 130 AREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188
Query: 412 FGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
T ++ AGT +MAPE + KSDVYSFGV++ E+ T
Sbjct: 189 KA--STFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 111/196 (56%), Gaps = 29/196 (14%)
Query: 289 LGAGGFGEVYKGV-LPSGR----EIAVKRLSKSSGQGAE-EFKNEVVVVAKLQHRNLVRL 342
LG+G FG VYKG+ +P G +A+K L++++G A EF +E +++A + H +LVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 343 LGFCLEDPEKQ---------GQLDWSRRYKI-IG---------LIARGILYLHEDSRLRI 383
LG CL P Q L++ +K IG IA+G++YL E R+
Sbjct: 83 LGVCLS-PTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RL 138
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
+HRDL N+L+ + + KI+DFG+A++ D+ + N +MA E + +F+
Sbjct: 139 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTH 198
Query: 444 KSDVYSFGVLVLEIIT 459
+SDV+S+GV + E++T
Sbjct: 199 QSDVWSYGVTIWELMT 214
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 111/196 (56%), Gaps = 29/196 (14%)
Query: 289 LGAGGFGEVYKGV-LPSGR----EIAVKRLSKSSGQGAE-EFKNEVVVVAKLQHRNLVRL 342
LG+G FG VYKG+ +P G +A+K L++++G A EF +E +++A + H +LVRL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 343 LGFCLEDPEKQ---------GQLDWSRRYKI-IG---------LIARGILYLHEDSRLRI 383
LG CL P Q L++ +K IG IA+G++YL E R+
Sbjct: 106 LGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RL 161
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
+HRDL N+L+ + + KI+DFG+A++ D+ + N +MA E + +F+
Sbjct: 162 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTH 221
Query: 444 KSDVYSFGVLVLEIIT 459
+SDV+S+GV + E++T
Sbjct: 222 QSDVWSYGVTIWELMT 237
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 28/207 (13%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAK 333
+A ++ + KLG G FGEV+ G +A+K L K E F E V+ K
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 235
Query: 334 LQHRNLVRLLGFCLEDP--------EKQGQLD--------WSRRYKIIGL---IARGILY 374
L+H LV+L E+P K LD + R +++ + IA G+ Y
Sbjct: 236 LRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 295
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMA 432
+ R+ +HRDL+ +NIL+ + K++DFG+A++ ++ T+R + + A
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTA 349
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIIT 459
PE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 350 PEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 28/207 (13%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAK 333
+A ++ + KLG G FGEV+ G +A+K L K E F E V+ K
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 235
Query: 334 LQHRNLVRLLGFCLEDP--------EKQGQLD--------WSRRYKIIGL---IARGILY 374
L+H LV+L E+P K LD + R +++ + IA G+ Y
Sbjct: 236 LRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 295
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMA 432
+ R+ +HRDL+ +NIL+ + K++DFG+A++ ++ T+R + + A
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTA 349
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIIT 459
PE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 350 PEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 28/207 (13%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAK 333
+A ++ + KLG G FGEV+ G +A+K L K E F E V+ K
Sbjct: 260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 318
Query: 334 LQHRNLVRLLGFCLEDP--------EKQGQLD--------WSRRYKIIGL---IARGILY 374
L+H LV+L E+P K LD + R +++ + IA G+ Y
Sbjct: 319 LRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 378
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMA 432
+ R+ +HRDL+ +NIL+ + K++DFG+A++ ++ T+R + + A
Sbjct: 379 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTA 432
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIIT 459
PE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 433 PEAALYGRFTIKSDVWSFGILLTELTT 459
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 28/207 (13%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAK 333
+A ++ + KLG G FGEV+ G +A+K L K E F E V+ K
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 235
Query: 334 LQHRNLVRLLGFCLEDP--------EKQGQLD--------WSRRYKIIGL---IARGILY 374
L+H LV+L E+P K LD + R +++ + IA G+ Y
Sbjct: 236 LRHEKLVQLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 295
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMA 432
+ R+ +HRDL+ +NIL+ + K++DFG+A++ ++ T+R + + A
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTA 349
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIIT 459
PE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 350 PEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 28/207 (13%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAK 333
+A ++ + KLG G FGEV+ G +A+K L K E F E V+ K
Sbjct: 1 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 59
Query: 334 LQHRNLVRLLGFCLEDP--------EKQGQLD--------WSRRYKIIGL---IARGILY 374
L+H LV+L E+P K LD + R +++ + IA G+ Y
Sbjct: 60 LRHEKLVQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 119
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMA 432
+ R+ +HRDL+ +NIL+ + K++DFG+A++ + T+R + + A
Sbjct: 120 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEXTARQGAKFPIKWTA 173
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIIT 459
PE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 174 PEAALYGRFTIKSDVWSFGILLTELTT 200
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 28/207 (13%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAK 333
+A ++ + KLG G FGEV+ G +A+K L K E F E V+ K
Sbjct: 8 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 66
Query: 334 LQHRNLVRLLGFCLEDP--------EKQGQLD--------WSRRYKIIGL---IARGILY 374
L+H LV+L E+P K LD + R +++ + IA G+ Y
Sbjct: 67 LRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAY 126
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMA 432
+ R+ +HRDL+ +NIL+ + K++DFG+A++ ++ T+R + + A
Sbjct: 127 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEW---TARQGAKFPIKWTA 180
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIIT 459
PE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 181 PEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 28/207 (13%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAK 333
+A ++ + KLG G FGEV+ G +A+K L K E F E V+ K
Sbjct: 8 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 66
Query: 334 LQHRNLVRLLGFCLEDP--------EKQGQLD--------WSRRYKIIGL---IARGILY 374
L+H LV+L E+P K LD + R +++ + IA G+ Y
Sbjct: 67 LRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAY 126
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMA 432
+ R+ +HRDL+ +NIL+ + K++DFG+A++ + T+R + + A
Sbjct: 127 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTA 180
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIIT 459
PE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 181 PEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 28/207 (13%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAK 333
+A ++ + KLG G FGEV+ G +A+K L K E F E V+ K
Sbjct: 2 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 60
Query: 334 LQHRNLVRLLGFCLEDP--------EKQGQLD--------WSRRYKIIGL---IARGILY 374
L+H LV+L E+P K LD + R +++ + IA G+ Y
Sbjct: 61 LRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 120
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMA 432
+ R+ +HRDL+ +NIL+ + K++DFG+A++ + T+R + + A
Sbjct: 121 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTA 174
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIIT 459
PE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 175 PEAALYGRFTIKSDVWSFGILLTELTT 201
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 28/207 (13%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAK 333
+A ++ + KLG G FGEV+ G +A+K L K E F E V+ K
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 69
Query: 334 LQHRNLVRLLGFCLEDP--------EKQGQLD--------WSRRYKIIGL---IARGILY 374
L+H LV+L E+P K LD + R +++ + IA G+ Y
Sbjct: 70 LRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMA 432
+ R+ +HRDL+ +NIL+ + K++DFG+A++ + T+R + + A
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEXTARQGAKFPIKWTA 183
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIIT 459
PE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 28/207 (13%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAK 333
+A ++ + KLG G FGEV+ G +A+K L K E F E V+ K
Sbjct: 4 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 62
Query: 334 LQHRNLVRLLGFCLEDP--------EKQGQLD--------WSRRYKIIGL---IARGILY 374
L+H LV+L E+P K LD + R +++ + IA G+ Y
Sbjct: 63 LRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 122
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMA 432
+ R+ +HRDL+ +NIL+ + K++DFG+A++ + T+R + + A
Sbjct: 123 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTA 176
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIIT 459
PE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 177 PEAALYGRFTIKSDVWSFGILLTELTT 203
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 28/207 (13%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAK 333
+A ++ + KLG G FGEV+ G +A+K L K E F E V+ K
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 69
Query: 334 LQHRNLVRLLGFCLEDP--------EKQGQLD--------WSRRYKIIGL---IARGILY 374
L+H LV+L E+P K LD + R +++ + IA G+ Y
Sbjct: 70 LRHEKLVQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMA 432
+ R+ +HRDL+ +NIL+ + K++DFG+A++ + T+R + + A
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTA 183
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIIT 459
PE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 28/206 (13%)
Query: 275 AIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKL 334
A ++ + KLG G FGEV+ G +A+K L K E F E V+ KL
Sbjct: 1 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKL 59
Query: 335 QHRNLVRLLGFCLEDP--------EKQGQLD--------WSRRYKIIGL---IARGILYL 375
+H LV+L E+P K LD + R +++ + IA G+ Y+
Sbjct: 60 RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 119
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAP 433
R+ +HRDL+ +NIL+ + K++DFG+A++ + T+R + + AP
Sbjct: 120 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAP 173
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 174 EAALYGRFTIKSDVWSFGILLTELTT 199
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 28/207 (13%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAK 333
+A ++ + KLG G FGEV+ G +A+K L K E F E V+ K
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 69
Query: 334 LQHRNLVRLLGFCLEDP--------EKQGQLD--------WSRRYKIIGL---IARGILY 374
L+H LV+L E+P K LD + R +++ + IA G+ Y
Sbjct: 70 LRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMA 432
+ R+ +HRDL+ +NIL+ + K++DFG+A++ + T+R + + A
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTA 183
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIIT 459
PE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 28/207 (13%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAK 333
+A ++ + KLG G FGEV+ G +A+K L K E F E V+ K
Sbjct: 178 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKK 236
Query: 334 LQHRNLVRLLGFCLEDP--------EKQGQLD--------WSRRYKIIGL---IARGILY 374
L+H LV+L E+P K LD + R +++ + IA G+ Y
Sbjct: 237 LRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 296
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMA 432
+ R+ +HRDL+ +NIL+ + K++DFG+ ++ ++ T+R + + A
Sbjct: 297 VE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEY---TARQGAKFPIKWTA 350
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIIT 459
PE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 351 PEAALYGRFTIKSDVWSFGILLTELTT 377
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 28/207 (13%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAK 333
+A ++ + KLG G FGEV+ G +A+K L K E F E V+ K
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 69
Query: 334 LQHRNLVRLLGFCLEDP--------EKQGQLD--------WSRRYKIIGL---IARGILY 374
L+H LV+L E+P K LD + R +++ + IA G+ Y
Sbjct: 70 LRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMA 432
+ R+ +HRDL+ +NIL+ + K++DFG+A++ + T+R + + A
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTA 183
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIIT 459
PE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 119/229 (51%), Gaps = 37/229 (16%)
Query: 255 PEGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGV-LPSGREI----A 309
P G A N + +F+ IKV LG+G FG VYKG+ +P G ++ A
Sbjct: 3 PSGEAPNQALLRILKETEFKKIKV----------LGSGAFGTVYKGLWIPEGEKVKIPVA 52
Query: 310 VKRLSKSSGQGA-EEFKNEVVVVAKLQHRNLVRLLGFCLEDPEKQGQ--------LDWSR 360
+K L +++ A +E +E V+A + + ++ RLLG CL + LD+ R
Sbjct: 53 IKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR 112
Query: 361 RYKI-IG---------LIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK 410
+K IG IA+G+ YL ED RL +HRDL N+L+ + KI+DFG+AK
Sbjct: 113 EHKDNIGSQYLLNWCVQIAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 169
Query: 411 IFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ G ++ + + +MA E +H ++ +SDV+S+GV V E++T
Sbjct: 170 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 28/207 (13%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAK 333
+A ++ + KLG G FGEV+ G +A+K L K E F E V+ K
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 69
Query: 334 LQHRNLVRLLGFCLEDP-------------------EKQGQLDWSRRYKIIGLIARGILY 374
L+H LV+L E+P E L + + IA G+ Y
Sbjct: 70 LRHEKLVQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMA 432
+ R+ +HRDL+ +NIL+ + K++DFG+A++ + T+R + + A
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTA 183
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIIT 459
PE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 28/207 (13%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAK 333
+A ++ + KLG G FGEV+ G +A+K L K E F E V+ K
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 69
Query: 334 LQHRNLVRLLGFCLEDP-------------------EKQGQLDWSRRYKIIGLIARGILY 374
L+H LV+L E+P E L + + IA G+ Y
Sbjct: 70 LRHEKLVQLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMA 432
+ R+ +HRDL+ +NIL+ + K++DFG+A++ + T+R + + A
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTA 183
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIIT 459
PE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 28/207 (13%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAK 333
+A ++ + KLG G FGEV+ G +A+K L K E F E V+ K
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 69
Query: 334 LQHRNLVRLLGFCLEDP--------EKQGQLD--------WSRRYKIIGL---IARGILY 374
L+H LV+L E+P K LD + R +++ + IA G+ Y
Sbjct: 70 LRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMA 432
+ R+ +HRDL +NIL+ + K++DFG+A++ + T+R + + A
Sbjct: 130 VE---RMNYVHRDLAAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTA 183
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIIT 459
PE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 28/207 (13%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAK 333
+A ++ + KLG G FGEV+ G +A+K L K E F E V+ K
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 69
Query: 334 LQHRNLVRLLGFCLEDP--------EKQGQLD--------WSRRYKIIGL---IARGILY 374
++H LV+L E+P K LD + R +++ + IA G+ Y
Sbjct: 70 IRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMA 432
+ R+ +HRDL+ +NIL+ + K++DFG+A++ + T+R + + A
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTA 183
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIIT 459
PE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 26/207 (12%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQH 336
++ + + ++G+G FG VYKG + + ++ + Q + FKNEV V+ K +H
Sbjct: 6 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 65
Query: 337 RNLVRLLGFCLEDPEKQGQLDW-------------SRRYKIIGLI------ARGILYLHE 377
N++ +G+ + P+ W ++++I LI A+G+ YLH
Sbjct: 66 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 124
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
S IIHRDLK +NI L ++ KI DFG+A + +++G+ +MAPE
Sbjct: 125 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
Query: 438 ---HGQFSVKSDVYSFGVLVLEIITGK 461
+S +SDVY+FG+++ E++TG+
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 26/207 (12%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQH 336
++ + + ++G+G FG VYKG + + ++ + Q + FKNEV V+ K +H
Sbjct: 9 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 337 RNLVRLLGFCLEDPEKQGQLDW-------------SRRYKIIGLI------ARGILYLHE 377
N++ +G+ + P+ W ++++I LI A+G+ YLH
Sbjct: 69 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
S IIHRDLK +NI L ++ KI DFG+A + +++G+ +MAPE
Sbjct: 128 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 438 ---HGQFSVKSDVYSFGVLVLEIITGK 461
+S +SDVY+FG+++ E++TG+
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 26/207 (12%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQH 336
++ + + ++G+G FG VYKG + + ++ + Q + FKNEV V+ K +H
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 337 RNLVRLLGFCLEDPEKQGQLDW-------------SRRYKIIGLI------ARGILYLHE 377
N++ +G+ + P+ W ++++I LI A+G+ YLH
Sbjct: 64 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
S IIHRDLK +NI L ++ KI DFG+A + +++G+ +MAPE
Sbjct: 123 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 438 ---HGQFSVKSDVYSFGVLVLEIITGK 461
+S +SDVY+FG+++ E++TG+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 28/193 (14%)
Query: 288 KLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFCL 347
+LG G FGEV+ G ++A+K L K E F E ++ KL+H LV+L
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 348 EDP--------EKQGQLDW-----SRRYKIIGLI------ARGILYLHEDSRLRIIHRDL 388
E+P K LD+ R K+ L+ A G+ Y+ R+ IHRDL
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDL 131
Query: 389 KVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKSD 446
+ +NIL+ + KI+DFG+A++ + T+R + + APE A++G+F++KSD
Sbjct: 132 RSANILVGNGLICKIADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 447 VYSFGVLVLEIIT 459
V+SFG+L+ E++T
Sbjct: 189 VWSFGILLTELVT 201
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 26/207 (12%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQH 336
++ + + ++G+G FG VYKG + + ++ + Q + FKNEV V+ K +H
Sbjct: 31 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 90
Query: 337 RNLVRLLGFCLEDPEKQGQLDW-------------SRRYKIIGLI------ARGILYLHE 377
N++ +G+ + P+ W ++++I LI A+G+ YLH
Sbjct: 91 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 149
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
S IIHRDLK +NI L ++ KI DFG+A + +++G+ +MAPE
Sbjct: 150 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 206
Query: 438 ---HGQFSVKSDVYSFGVLVLEIITGK 461
+S +SDVY+FG+++ E++TG+
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 26/207 (12%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQH 336
++ + + ++G+G FG VYKG + + ++ + Q + FKNEV V+ K +H
Sbjct: 9 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 337 RNLVRLLGFCLEDPEKQGQLDW-------------SRRYKIIGLI------ARGILYLHE 377
N++ +G+ + P+ W ++++I LI A+G+ YLH
Sbjct: 69 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
S IIHRDLK +NI L ++ KI DFG+A + +++G+ +MAPE
Sbjct: 128 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 438 ---HGQFSVKSDVYSFGVLVLEIITGK 461
+S +SDVY+FG+++ E++TG+
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 26/207 (12%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQH 336
++ + + ++G+G FG VYKG + + ++ + Q + FKNEV V+ K +H
Sbjct: 32 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 337 RNLVRLLGFCLEDPEKQGQLDW-------------SRRYKIIGLI------ARGILYLHE 377
N++ +G+ + P+ W ++++I LI A+G+ YLH
Sbjct: 92 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
S IIHRDLK +NI L ++ KI DFG+A + +++G+ +MAPE
Sbjct: 151 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 438 ---HGQFSVKSDVYSFGVLVLEIITGK 461
+S +SDVY+FG+++ E++TG+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 121/232 (52%), Gaps = 35/232 (15%)
Query: 260 DNDLTTLESLQFDF--EAIKVA------TNKFSTDNKLGAGGFGEVYKGV-LPSGREI-- 308
D D+ T E+L F EA A +F LG+G FG VYKG+ +P G ++
Sbjct: 11 DYDIPTTENLYFQGSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI 70
Query: 309 --AVKRLSKSSGQGA-EEFKNEVVVVAKLQHRNLVRLLGFCLEDPEKQGQ--------LD 357
A+K L +++ A +E +E V+A + + ++ RLLG CL + LD
Sbjct: 71 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLD 130
Query: 358 WSRRYKI-IG---------LIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFG 407
+ R +K IG IA+G+ YL ED RL +HRDL N+L+ + KI+DFG
Sbjct: 131 YVREHKDNIGSQYLLNWCVQIAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFG 187
Query: 408 MAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+AK+ G ++ + + +MA E +H ++ +SDV+S+GV V E++T
Sbjct: 188 LAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 26/207 (12%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQH 336
++ + + ++G+G FG VYKG + + ++ + Q + FKNEV V+ K +H
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 337 RNLVRLLGFCLEDPEKQGQLDW-------------SRRYKIIGLI------ARGILYLHE 377
N++ +G+ P+ W ++++I LI A+G+ YLH
Sbjct: 64 VNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
S IIHRDLK +NI L ++ KI DFG+A + +++G+ +MAPE
Sbjct: 123 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 438 ---HGQFSVKSDVYSFGVLVLEIITGK 461
+S +SDVY+FG+++ E++TG+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 28/210 (13%)
Query: 271 FDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVV 330
++ +A ++ + KLGAG FGEV+ ++AVK + K E F E V
Sbjct: 5 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANV 63
Query: 331 VAKLQHRNLVRLLGFCLEDP--------EKQGQLDWSRR--------YKIIGL---IARG 371
+ LQH LV+L ++P K LD+ + K+I IA G
Sbjct: 64 MKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 123
Query: 372 ILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG-- 429
+ ++ + + IHRDL+ +NIL+ A + KI+DFG+A++ + T+R +
Sbjct: 124 MAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPIK 177
Query: 430 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ APE G F++KSDV+SFG+L++EI+T
Sbjct: 178 WTAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 76 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 134
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG+AK+ G ++ + + +MA E
Sbjct: 135 EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 75 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 133
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG+AK+ G ++ + + +MA E
Sbjct: 134 EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 69 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 127
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG+AK+ G ++ + + +MA E
Sbjct: 128 EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMT 208
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 135
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG+AK+ G ++ + + +MA E
Sbjct: 136 EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 78 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 136
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG+AK+ G ++ + + +MA E
Sbjct: 137 EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 76 DNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 134
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG+AK+ G ++ + + +MA E
Sbjct: 135 EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 335 QHRNLVRLLGFCLEDPEKQ--------GQLDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 133
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG+AK+ G ++ + + +MA E
Sbjct: 134 EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 118/229 (51%), Gaps = 37/229 (16%)
Query: 255 PEGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGV-LPSGREI----A 309
P G A N + +F+ IKV LG+G FG VYKG+ +P G ++ A
Sbjct: 33 PSGEAPNQALLRILKETEFKKIKV----------LGSGAFGTVYKGLWIPEGEKVKIPVA 82
Query: 310 VKRLSKSSGQGA-EEFKNEVVVVAKLQHRNLVRLLGFCLEDPEKQGQ--------LDWSR 360
+ L +++ A +E +E V+A + + ++ RLLG CL + LD+ R
Sbjct: 83 IMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR 142
Query: 361 RYKI-IG---------LIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK 410
+K IG IA+G+ YL ED RL +HRDL N+L+ + KI+DFG+AK
Sbjct: 143 EHKDNIGSQYLLNWCVQIAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 199
Query: 411 IFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ G ++ + + +MA E +H ++ +SDV+S+GV V E++T
Sbjct: 200 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 81 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 139
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG+AK+ G ++ + + +MA E
Sbjct: 140 EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 198 LHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 133
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG+AK+ G ++ + + +MA E
Sbjct: 134 EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 28/194 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LGAG FGEV+ G ++AVK L + S + F E ++ +LQH+ LVRL
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 347 LEDP--------EKQGQLDWSRRYKIIGL-----------IARGILYLHEDSRLRIIHRD 387
++P E +D+ + I L IA G+ ++ E + IHRD
Sbjct: 86 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 142
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKS 445
L+ +NIL+ ++ KI+DFG+A++ ++ T+R + + APE +G F++KS
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 446 DVYSFGVLVLEIIT 459
DV+SFG+L+ EI+T
Sbjct: 200 DVWSFGILLTEIVT 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 28/194 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LGAG FGEV+ G ++AVK L + S + F E ++ +LQH+ LVRL
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 347 LEDP--------EKQGQLDWSRRYKIIGL-----------IARGILYLHEDSRLRIIHRD 387
++P E +D+ + I L IA G+ ++ E + IHRD
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 140
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKS 445
L+ +NIL+ ++ KI+DFG+A++ ++ T+R + + APE +G F++KS
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 446 DVYSFGVLVLEIIT 459
DV+SFG+L+ EI+T
Sbjct: 198 DVWSFGILLTEIVT 211
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 28/194 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LGAG FGEV+ G ++AVK L + S + F E ++ +LQH+ LVRL
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 347 LEDP--------EKQGQLDWSRRYKIIGL-----------IARGILYLHEDSRLRIIHRD 387
++P E +D+ + I L IA G+ ++ E + IHRD
Sbjct: 80 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 136
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKS 445
L+ +NIL+ ++ KI+DFG+A++ + T+R + + APE +G F++KS
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 446 DVYSFGVLVLEIIT 459
DV+SFG+L+ EI+T
Sbjct: 194 DVWSFGILLTEIVT 207
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 136
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG+AK+ G ++ + + +MA E
Sbjct: 137 EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 85 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 143
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG+AK+ G ++ + + +MA E
Sbjct: 144 EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 201
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 202 LHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 28/194 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LGAG FGEV+ G ++AVK L + S + F E ++ +LQH+ LVRL
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 347 LEDP--------EKQGQLDWSRRYKIIGL-----------IARGILYLHEDSRLRIIHRD 387
++P E +D+ + I L IA G+ ++ E + IHRD
Sbjct: 79 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 135
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKS 445
L+ +NIL+ ++ KI+DFG+A++ + T+R + + APE +G F++KS
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 446 DVYSFGVLVLEIIT 459
DV+SFG+L+ EI+T
Sbjct: 193 DVWSFGILLTEIVT 206
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 28/194 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LGAG FGEV+ G ++AVK L + S + F E ++ +LQH+ LVRL
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 347 LEDP--------EKQGQLDWSRRYKIIGL-----------IARGILYLHEDSRLRIIHRD 387
++P E +D+ + I L IA G+ ++ E + IHRD
Sbjct: 87 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 143
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKS 445
L+ +NIL+ ++ KI+DFG+A++ + T+R + + APE +G F++KS
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 446 DVYSFGVLVLEIIT 459
DV+SFG+L+ EI+T
Sbjct: 201 DVWSFGILLTEIVT 214
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 28/194 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LGAG FGEV+ G ++AVK L + S + F E ++ +LQH+ LVRL
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 347 LEDP--------EKQGQLDWSRRYKIIGL-----------IARGILYLHEDSRLRIIHRD 387
++P E +D+ + I L IA G+ ++ E + IHRD
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 134
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKS 445
L+ +NIL+ ++ KI+DFG+A++ + T+R + + APE +G F++KS
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 446 DVYSFGVLVLEIIT 459
DV+SFG+L+ EI+T
Sbjct: 192 DVWSFGILLTEIVT 205
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 136
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG+AK+ G ++ + + +MA E
Sbjct: 137 EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 133
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG+AK+ G ++ + + +MA E
Sbjct: 134 EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 77 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 135
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG+AK+ G ++ + + +MA E
Sbjct: 136 EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 28/194 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LGAG FGEV+ G ++AVK L + S + F E ++ +LQH+ LVRL
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 347 LEDP--------EKQGQLDWSRRYKIIGL-----------IARGILYLHEDSRLRIIHRD 387
++P E +D+ + I L IA G+ ++ E + IHRD
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 134
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKS 445
L+ +NIL+ ++ KI+DFG+A++ + T+R + + APE +G F++KS
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 446 DVYSFGVLVLEIIT 459
DV+SFG+L+ EI+T
Sbjct: 192 DVWSFGILLTEIVT 205
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 136
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG+AK+ G ++ + + +MA E
Sbjct: 137 EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 82 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 140
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG+AK+ G ++ + + +MA E
Sbjct: 141 EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 28/210 (13%)
Query: 271 FDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVV 330
++ +A ++ + KLGAG FGEV+ ++AVK + K E F E V
Sbjct: 178 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANV 236
Query: 331 VAKLQHRNLVRLLGFCLEDP--------EKQGQLDWSRR--------YKIIGL---IARG 371
+ LQH LV+L ++P K LD+ + K+I IA G
Sbjct: 237 MKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 296
Query: 372 ILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG-- 429
+ ++ + + IHRDL+ +NIL+ A + KI+DFG+A++ + T+R +
Sbjct: 297 MAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPIK 350
Query: 430 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ APE G F++KSDV+SFG+L++EI+T
Sbjct: 351 WTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 28/194 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LGAG FGEV+ G ++AVK L + S + F E ++ +LQH+ LVRL
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 347 LEDP--------EKQGQLDWSRRYKIIGL-----------IARGILYLHEDSRLRIIHRD 387
++P E +D+ + I L IA G+ ++ E + IHRD
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 140
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKS 445
L+ +NIL+ ++ KI+DFG+A++ + T+R + + APE +G F++KS
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 446 DVYSFGVLVLEIIT 459
DV+SFG+L+ EI+T
Sbjct: 198 DVWSFGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 28/194 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LGAG FGEV+ G ++AVK L + S + F E ++ +LQH+ LVRL
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 347 LEDP--------EKQGQLDWSRRYKIIGL-----------IARGILYLHEDSRLRIIHRD 387
++P E +D+ + I L IA G+ ++ E + IHRD
Sbjct: 83 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 139
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKS 445
L+ +NIL+ ++ KI+DFG+A++ + T+R + + APE +G F++KS
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 446 DVYSFGVLVLEIIT 459
DV+SFG+L+ EI+T
Sbjct: 197 DVWSFGILLTEIVT 210
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 28/194 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LGAG FGEV+ G ++AVK L + S + F E ++ +LQH+ LVRL
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 347 LEDP--------EKQGQLDWSRRYKIIGL-----------IARGILYLHEDSRLRIIHRD 387
++P E +D+ + I L IA G+ ++ E + IHRD
Sbjct: 88 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 144
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKS 445
L+ +NIL+ ++ KI+DFG+A++ + T+R + + APE +G F++KS
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 446 DVYSFGVLVLEIIT 459
DV+SFG+L+ EI+T
Sbjct: 202 DVWSFGILLTEIVT 215
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 28/194 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LGAG FGEV+ G ++AVK L + S + F E ++ +LQH+ LVRL
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 347 LEDP--------EKQGQLDWSRRYKIIGL-----------IARGILYLHEDSRLRIIHRD 387
++P E +D+ + I L IA G+ ++ E + IHRD
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 134
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKS 445
L+ +NIL+ ++ KI+DFG+A++ + T+R + + APE +G F++KS
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 446 DVYSFGVLVLEIIT 459
DV+SFG+L+ EI+T
Sbjct: 192 DVWSFGILLTEIVT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 28/194 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LGAG FGEV+ G ++AVK L + S + F E ++ +LQH+ LVRL
Sbjct: 14 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 347 LEDP--------EKQGQLDWSRRYKIIGL-----------IARGILYLHEDSRLRIIHRD 387
++P E +D+ + I L IA G+ ++ E + IHRD
Sbjct: 73 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 129
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKS 445
L+ +NIL+ ++ KI+DFG+A++ + T+R + + APE +G F++KS
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 446 DVYSFGVLVLEIIT 459
DV+SFG+L+ EI+T
Sbjct: 187 DVWSFGILLTEIVT 200
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 26/207 (12%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQH 336
++ + + ++G+G FG VYKG + + ++ + Q + FKNEV V+ K +H
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 337 RNLVRLLGFCLEDPEKQGQLDW-------------SRRYKIIGLI------ARGILYLHE 377
N++ +G+ + P+ W ++++I LI A+G+ YLH
Sbjct: 64 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
S IIHRDLK +NI L ++ KI DFG+A +++G+ +MAPE
Sbjct: 123 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 438 ---HGQFSVKSDVYSFGVLVLEIITGK 461
+S +SDVY+FG+++ E++TG+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 109/203 (53%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA G+ YL
Sbjct: 72 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYL- 130
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG+AK+ G ++ + + +MA E
Sbjct: 131 EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 188
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 189 LHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 26/207 (12%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQH 336
++ + + ++G+G FG VYKG + + ++ + Q + FKNEV V+ K +H
Sbjct: 24 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 83
Query: 337 RNLVRLLGFCLEDPEKQGQLDW-------------SRRYKIIGLI------ARGILYLHE 377
N++ +G+ + P+ W ++++I LI A+G+ YLH
Sbjct: 84 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 142
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
S IIHRDLK +NI L ++ KI DFG+A +++G+ +MAPE
Sbjct: 143 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 199
Query: 438 ---HGQFSVKSDVYSFGVLVLEIITGK 461
+S +SDVY+FG+++ E++TG+
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 109/203 (53%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 79 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 137
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG AK+ G ++ + + +MA E
Sbjct: 138 EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 26/207 (12%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQH 336
++ + + ++G+G FG VYKG + + ++ + Q + FKNEV V+ K +H
Sbjct: 32 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 337 RNLVRLLGFCLEDPEKQGQLDW-------------SRRYKIIGLI------ARGILYLHE 377
N++ +G+ + P+ W ++++I LI A+G+ YLH
Sbjct: 92 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
S IIHRDLK +NI L ++ KI DFG+A +++G+ +MAPE
Sbjct: 151 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 438 ---HGQFSVKSDVYSFGVLVLEIITGK 461
+S +SDVY+FG+++ E++TG+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 109/203 (53%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 135
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG AK+ G ++ + + +MA E
Sbjct: 136 EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 109/203 (53%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 135
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG AK+ G ++ + + +MA E
Sbjct: 136 EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 109/203 (53%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 77 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 135
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG AK+ G ++ + + +MA E
Sbjct: 136 EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 109/203 (53%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 133
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG AK+ G ++ + + +MA E
Sbjct: 134 EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 26/207 (12%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQH 336
++ + + ++G+G FG VYKG + + ++ + Q + FKNEV V+ K +H
Sbjct: 8 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 67
Query: 337 RNLVRLLGFCLEDPEKQGQLDW-------------SRRYKIIGLI------ARGILYLHE 377
N++ +G+ + P+ W ++++ LI ARG+ YLH
Sbjct: 68 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 126
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
S IIHRDLK +NI L + KI DFG+A + +++G+ +MAPE
Sbjct: 127 KS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 183
Query: 438 ---HGQFSVKSDVYSFGVLVLEIITGK 461
+S +SDVY+FG+++ E++TG+
Sbjct: 184 MQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 109/203 (53%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F LG+G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 82 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 140
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG AK+ G ++ + + +MA E
Sbjct: 141 EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 109/203 (53%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F L +G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 133
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG+AK+ G ++ + + +MA E
Sbjct: 134 EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 109/203 (53%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F L +G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 82 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 140
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG+AK+ G ++ + + +MA E
Sbjct: 141 EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 109/203 (53%), Gaps = 27/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREI----AVKRLSKSSGQGA-EEFKNEVVVVAKL 334
+F L +G FG VYKG+ +P G ++ A+K L +++ A +E +E V+A +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 335 QHRNLVRLLGFCLEDPEKQGQ--------LDWSRRYKI-IG---------LIARGILYLH 376
+ ++ RLLG CL + LD+ R +K IG IA+G+ YL
Sbjct: 82 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 140
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
ED RL +HRDL N+L+ + KI+DFG+AK+ G ++ + + +MA E
Sbjct: 141 EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+H ++ +SDV+S+GV V E++T
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 28/207 (13%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAK 333
+A +V +LGAG GEV+ G ++AVK L + S + F E ++ +
Sbjct: 6 DAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 64
Query: 334 LQHRNLVRLLGFCLEDP--------EKQGQLDWSRRYKIIGL-----------IARGILY 374
LQH+ LVRL ++P E +D+ + I L IA G+ +
Sbjct: 65 LQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMA 432
+ E + IHRDL+ +NIL+ ++ KI+DFG+A++ + T+R + + A
Sbjct: 125 IEERN---YIHRDLRAANILVSDTLSCKIADFGLARLI---EDAEXTAREGAKFPIKWTA 178
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIIT 459
PE +G F++KSDV+SFG+L+ EI+T
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 34/208 (16%)
Query: 271 FDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVV 330
++ +A ++ + KLGAG FGEV+ ++AVK + K E F E V
Sbjct: 172 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANV 230
Query: 331 VAKLQHRNLVRLLGFCLEDP--------EKQGQLDWSRR--------YKIIGL---IARG 371
+ LQH LV+L ++P K LD+ + K+I IA G
Sbjct: 231 MKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 290
Query: 372 ILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYM 431
+ ++ + + IHRDL+ +NIL+ A + KI+DFG+A++ G I T
Sbjct: 291 MAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARV-------GAKFPIKWT---- 336
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIIT 459
APE G F++KSDV+SFG+L++EI+T
Sbjct: 337 APEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 103/193 (53%), Gaps = 28/193 (14%)
Query: 288 KLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFCL 347
+LGAG FGEV+ G ++AVK L + S + F E ++ +LQH+ LVRL
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT 74
Query: 348 EDP--------EKQGQLDWSRRYKIIGL-----------IARGILYLHEDSRLRIIHRDL 388
++P E +D+ + I L IA G+ ++ E + IHR+L
Sbjct: 75 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRNL 131
Query: 389 KVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKSD 446
+ +NIL+ ++ KI+DFG+A++ + T+R + + APE +G F++KSD
Sbjct: 132 RAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 188
Query: 447 VYSFGVLVLEIIT 459
V+SFG+L+ EI+T
Sbjct: 189 VWSFGILLTEIVT 201
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 38/216 (17%)
Query: 278 VATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA-------EEFKNEVV 329
+A N+ + ++G GGFG V+KG L + + A+K L +G +EF+ EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 330 VVAKLQHRNLVRLLGFCLEDP-----------------EKQGQLDWSRRYKIIGLIARGI 372
+++ L H N+V+L G P +K + WS + +++ IA GI
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 373 LYLHEDSRLRIIHRDLKVSNILL-----DAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
Y+ ++ I+HRDL+ NI L +A + K++DFG+++ Q+ + S + G
Sbjct: 136 EYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGN 189
Query: 428 YGYMAPEY--AMHGQFSVKSDVYSFGVLVLEIITGK 461
+ +MAPE A ++ K+D YSF +++ I+TG+
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 106/223 (47%), Gaps = 38/223 (17%)
Query: 264 TTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAE 322
T+++ +++ ++ + +KLG G +GEVY+GV +AVK L + + + E
Sbjct: 1 TSMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VE 59
Query: 323 EFKNEVVVVAKLQHRNLVRLLGFCLEDPEKQGQLDWSRRYKIIGLIARGIL--YLHEDSR 380
EF E V+ +++H NLV+LLG C +P Y II + G L YL E +R
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPP---------FYIIIEFMTYGNLLDYLRECNR 110
Query: 381 LRI------------------------IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQ 416
+ IHRDL N L+ K++DFG++++ D
Sbjct: 111 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 170
Query: 417 TQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ + APE + +FS+KSDV++FGVL+ EI T
Sbjct: 171 YTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 271 FDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVV 330
+D +A ++ +LGAG FGEV+ G + ++AVK L K + F E +
Sbjct: 3 WDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANL 61
Query: 331 VAKLQHRNLVRLLGFCL-EDP-------------------EKQGQLDWSRRYKIIGLIAR 370
+ LQH LVRL E+P ++ G++ + IA
Sbjct: 62 MKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 121
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTY-- 428
G+ Y+ R IHRDL+ +N+L+ + KI+DFG+A++ + T+R +
Sbjct: 122 GMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVI---EDNEYTAREGAKFPI 175
Query: 429 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ APE G F++KSDV+SFG+L+ EI+T
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 110/216 (50%), Gaps = 38/216 (17%)
Query: 278 VATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA-------EEFKNEVV 329
+A N+ + ++G GGFG V+KG L + + A+K L +G +EF+ EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 330 VVAKLQHRNLVRLLGFCLEDP-----------------EKQGQLDWSRRYKIIGLIARGI 372
+++ L H N+V+L G P +K + WS + +++ IA GI
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 373 LYLHEDSRLRIIHRDLKVSNILL-----DAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
Y+ ++ I+HRDL+ NI L +A + K++DFG ++ Q+ + S + G
Sbjct: 136 EYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGN 189
Query: 428 YGYMAPEY--AMHGQFSVKSDVYSFGVLVLEIITGK 461
+ +MAPE A ++ K+D YSF +++ I+TG+
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 264 TTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAE 322
T+++ +++ ++ + +KLG G +GEVY+GV +AVK L + + + E
Sbjct: 1 TSMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VE 59
Query: 323 EFKNEVVVVAKLQHRNLVRLLGFCLEDPE---------KQGQLDWSRRYKIIGLIARGIL 373
EF E V+ +++H NLV+LLG C +P LD+ R + A +L
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 374 YLHED--------SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIA 425
Y+ + IHRDL N L+ K++DFG++++ D +
Sbjct: 120 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AK 178
Query: 426 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 179 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 38/215 (17%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEEFKNEVVV 330
+++ ++ + +KLG G +GEVY+GV +AVK L + + + EEF E V
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 63
Query: 331 VAKLQHRNLVRLLGFCLEDPEKQGQLDWSRRYKIIGLIARGIL--YLHEDSRLRI----- 383
+ +++H NLV+LLG C +P Y II + G L YL E +R +
Sbjct: 64 MKEIKHPNLVQLLGVCTREPP---------FYIIIEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 384 -------------------IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRI 424
IHRDL N L+ K++DFG++++ D +
Sbjct: 115 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG-A 173
Query: 425 AGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 174 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 26/207 (12%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQH 336
++ + + ++G+G FG VYKG + + ++ + Q + FKNEV V+ K +H
Sbjct: 20 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 337 RNLVRLLGFCLEDPEKQGQLDW-------------SRRYKIIGLI------ARGILYLHE 377
N++ +G+ + P+ W ++++ LI ARG+ YLH
Sbjct: 80 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
S IIHRDLK +NI L + KI DFG+A +++G+ +MAPE
Sbjct: 139 KS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 438 ---HGQFSVKSDVYSFGVLVLEIITGK 461
+S +SDVY+FG+++ E++TG+
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 38/215 (17%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEEFKNEVVV 330
+++ ++ + +KLG G +GEVY+GV +AVK L + + + EEF E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 331 VAKLQHRNLVRLLGFCLEDPEKQGQLDWSRRYKIIGLIARGIL--YLHEDSRLRI----- 383
+ +++H NLV+LLG C +P Y II + G L YL E +R +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPP---------FYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 384 -------------------IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRI 424
IHRDL N L+ K++DFG++++ D +
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-A 172
Query: 425 AGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 20/195 (10%)
Query: 283 FSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR 341
+ +KLG G FGEVY+GV +AVK L + + + EEF E V+ +++H NLV+
Sbjct: 13 ITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQ 71
Query: 342 LLGFCLEDPE---------KQGQLDWSRRYKIIGLIARGILYLHED--------SRLRII 384
LLG C +P LD+ R + A +LY+ + I
Sbjct: 72 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 131
Query: 385 HRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVK 444
HRDL N L+ K++DFG++++ D + + APE + +FS+K
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG-AKFPIKWTAPESLAYNKFSIK 190
Query: 445 SDVYSFGVLVLEIIT 459
SDV++FGVL+ EI T
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEEFKNEVVV 330
+++ ++ + +KLG G +GEVY+GV +AVK L + + + EEF E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 67
Query: 331 VAKLQHRNLVRLLGFCLEDPE---------KQGQLDWSRRYKIIGLIARGILYLHED--- 378
+ +++H NLV+LLG C +P LD+ R + A +LY+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 379 -----SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ IHRDL N L+ K++DFG++++ D + + AP
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG-AKFPIKWTAP 186
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +FS+KSDV++FGVL+ EI T
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 38/215 (17%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEEFKNEVVV 330
+++ ++ + +KLG G +GEVY+GV +AVK L + + + EEF E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 331 VAKLQHRNLVRLLGFCLEDPEKQGQLDWSRRYKIIGLIARGIL--YLHEDSRLRI----- 383
+ +++H NLV+LLG C +P Y II + G L YL E +R +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPP---------FYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 384 -------------------IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRI 424
IHRDL N L+ K++DFG++++ D +
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-A 172
Query: 425 AGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKGV-LPSGR----EIAVKRLSK-SSGQGAEEFKNEVVVVAKLQHRNLVRL 342
LG+G FG VYKG+ +P G +A+K L + +S + +E +E V+A + + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 343 LGFCLEDP------------------EKQGQLDWSRRYKIIGLIARGILYLHEDSRLRII 384
LG CL E +G+L IA+G+ YL + +R++
Sbjct: 85 LGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLED---VRLV 141
Query: 385 HRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVK 444
HRDL N+L+ + + KI+DFG+A++ +D+T+ + +MA E + +F+ +
Sbjct: 142 HRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQ 201
Query: 445 SDVYSFGVLVLEIIT 459
SDV+S+GV V E++T
Sbjct: 202 SDVWSYGVTVWELMT 216
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 97/204 (47%), Gaps = 38/204 (18%)
Query: 283 FSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR 341
+ +KLG G +GEVY+GV +AVK L + + + EEF E V+ +++H NLV+
Sbjct: 13 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQ 71
Query: 342 LLGFCLEDPEKQGQLDWSRRYKIIGLIARGIL--YLHEDSRLRI---------------- 383
LLG C +P Y II + G L YL E +R +
Sbjct: 72 LLGVCTREPP---------FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 384 --------IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
IHRDL N L+ K++DFG++++ D + + APE
Sbjct: 123 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG-AKFPIKWTAPES 181
Query: 436 AMHGQFSVKSDVYSFGVLVLEIIT 459
+ +FS+KSDV++FGVL+ EI T
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 26/207 (12%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQH 336
++ + + ++G+G FG VYKG + + ++ + Q + FKNEV V+ K +H
Sbjct: 20 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 337 RNLVRLLGFCLEDPEKQGQLDW-------------SRRYKIIGLI------ARGILYLHE 377
N++ +G+ P+ W ++++ LI ARG+ YLH
Sbjct: 80 VNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
S IIHRDLK +NI L + KI DFG+A +++G+ +MAPE
Sbjct: 139 KS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 438 ---HGQFSVKSDVYSFGVLVLEIITGK 461
+S +SDVY+FG+++ E++TG+
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEEFKNEVVV 330
+++ ++ + +KLG G +GEVY+GV +AVK L + + + EEF E V
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 66
Query: 331 VAKLQHRNLVRLLGFCLEDPE---------KQGQLDWSRRYKIIGLIARGILYLHED--- 378
+ +++H NLV+LLG C +P LD+ R + A +LY+
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 126
Query: 379 -----SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ IHRDL N L+ K++DFG++++ D + + AP
Sbjct: 127 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAP 185
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +FS+KSDV++FGVL+ EI T
Sbjct: 186 ESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEEFKNEVVV 330
+++ ++ + +KLG G +GEVY+GV +AVK L + + + EEF E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 67
Query: 331 VAKLQHRNLVRLLGFCLEDPE---------KQGQLDWSRRYKIIGLIARGILYLHED--- 378
+ +++H NLV+LLG C +P LD+ R + A +LY+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 127
Query: 379 -----SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ IHRDL N L+ K++DFG++++ D + + AP
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAP 186
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +FS+KSDV++FGVL+ EI T
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEEFKNEVVV 330
+++ ++ + +KLG G +GEVY+GV +AVK L + + + EEF E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 331 VAKLQHRNLVRLLGFCLEDPE---------KQGQLDWSRRYKIIGLIARGILYLHED--- 378
+ +++H NLV+LLG C +P LD+ R + A +LY+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 379 -----SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ IHRDL N L+ K++DFG++++ D + + AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAP 181
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +FS+KSDV++FGVL+ EI T
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 110/216 (50%), Gaps = 38/216 (17%)
Query: 278 VATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA-------EEFKNEVV 329
+A N+ + ++G GGFG V+KG L + + A+K L +G +EF+ EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 330 VVAKLQHRNLVRLLGFCLEDP-----------------EKQGQLDWSRRYKIIGLIARGI 372
+++ L H N+V+L G P +K + WS + +++ IA GI
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 373 LYLHEDSRLRIIHRDLKVSNILL-----DAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
Y+ ++ I+HRDL+ NI L +A + K++DF +++ Q+ + S + G
Sbjct: 136 EYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGN 189
Query: 428 YGYMAPEY--AMHGQFSVKSDVYSFGVLVLEIITGK 461
+ +MAPE A ++ K+D YSF +++ I+TG+
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEEFKNEVVV 330
+++ ++ + +KLG G +GEVY+GV +AVK L + + + EEF E V
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 63
Query: 331 VAKLQHRNLVRLLGFCLEDPE---------KQGQLDWSRRYKIIGLIARGILYLHED--- 378
+ +++H NLV+LLG C +P LD+ R + A +LY+
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 379 -----SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ IHRDL N L+ K++DFG++++ D T + + AP
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAPAGAKFPIKWTAP 182
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +FS+KSDV++FGVL+ EI T
Sbjct: 183 ESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEEFKNEVVV 330
+++ ++ + +KLG G +GEVY+GV +AVK L + + + EEF E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 331 VAKLQHRNLVRLLGFCLEDPE---------KQGQLDWSRRYKIIGLIARGILYLHED--- 378
+ +++H NLV+LLG C +P LD+ R + A +LY+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 379 -----SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ IHRDL N L+ K++DFG++++ D + + AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAP 181
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +FS+KSDV++FGVL+ EI T
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEEFKNEVVV 330
+++ ++ + +KLG G +GEVY+GV +AVK L + + + EEF E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 331 VAKLQHRNLVRLLGFCLEDPE---------KQGQLDWSRRYKIIGLIARGILYLHED--- 378
+ +++H NLV+LLG C +P LD+ R + A +LY+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 379 -----SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ IHRDL N L+ K++DFG++++ D + + AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAP 181
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +FS+KSDV++FGVL+ EI T
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEEFKNEVVV 330
+++ ++ + +KLG G +GEVY+GV +AVK L + + + EEF E V
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 64
Query: 331 VAKLQHRNLVRLLGFCLEDPE---------KQGQLDWSRRYKIIGLIARGILYLHED--- 378
+ +++H NLV+LLG C +P LD+ R + A +LY+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 379 -----SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ IHRDL N L+ K++DFG++++ D T + + AP
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAPAGAKFPIKWTAP 183
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +FS+KSDV++FGVL+ EI T
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEEFKNEVVV 330
+++ ++ + +KLG G +GEVY+GV +AVK L + + + EEF E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 331 VAKLQHRNLVRLLGFCLEDPE---------KQGQLDWSRRYKIIGLIARGILYLHED--- 378
+ +++H NLV+LLG C +P LD+ R + A +LY+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 379 -----SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ IHRDL N L+ K++DFG++++ D + + AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAP 181
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +FS+KSDV++FGVL+ EI T
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEEFKNEVVV 330
+++ ++ + +KLG G +GEVY+GV +AVK L + + + EEF E V
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 75
Query: 331 VAKLQHRNLVRLLGFCLEDPE---------KQGQLDWSRRYKIIGLIARGILYLHED--- 378
+ +++H NLV+LLG C +P LD+ R + A +LY+
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 135
Query: 379 -----SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ IHRDL N L+ K++DFG++++ D T + + AP
Sbjct: 136 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAP 194
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +FS+KSDV++FGVL+ EI T
Sbjct: 195 ESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEEFKNEVVV 330
+++ ++ + +KLG G +GEVY+GV +AVK L + + + EEF E V
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 64
Query: 331 VAKLQHRNLVRLLGFCLEDPE---------KQGQLDWSRRYKIIGLIARGILYLHED--- 378
+ +++H NLV+LLG C +P LD+ R + A +LY+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 379 -----SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ IHRDL N L+ K++DFG++++ D + + AP
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAP 183
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +FS+KSDV++FGVL+ EI T
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEEFKNEVVV 330
+++ ++ + +KLG G +GEVY+GV +AVK L + + + EEF E V
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 64
Query: 331 VAKLQHRNLVRLLGFCLEDPE---------KQGQLDWSRRYKIIGLIARGILYLHED--- 378
+ +++H NLV+LLG C +P LD+ R + A +LY+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 379 -----SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ IHRDL N L+ K++DFG++++ D T + + AP
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAP 183
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +FS+KSDV++FGVL+ EI T
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEEFKNEVVV 330
+++ ++ + +KLG G +GEVY+GV +AVK L + + + EEF E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 67
Query: 331 VAKLQHRNLVRLLGFCLEDPE---------KQGQLDWSRRYKIIGLIARGILYLHED--- 378
+ +++H NLV+LLG C +P LD+ R + A +LY+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 379 -----SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ IHRDL N L+ K++DFG++++ D T + + AP
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAP 186
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +FS+KSDV++FGVL+ EI T
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 20/195 (10%)
Query: 283 FSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR 341
+ +KLG G +GEVY+GV +AVK L + + + EEF E V+ +++H NLV+
Sbjct: 13 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQ 71
Query: 342 LLGFCLEDPE---------KQGQLDWSRRYKIIGLIARGILYLHED--------SRLRII 384
LLG C +P LD+ R + A +LY+ + I
Sbjct: 72 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 131
Query: 385 HRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVK 444
HRDL N L+ K++DFG++++ D + + APE + +FS+K
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAG-AKFPIKWTAPESLAYNKFSIK 190
Query: 445 SDVYSFGVLVLEIIT 459
SDV++FGVL+ EI T
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 265 TLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEE 323
T+ + +++ ++ + +KLG G +GEVY+GV +AVK L + + + EE
Sbjct: 204 TIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEE 262
Query: 324 FKNEVVVVAKLQHRNLVRLLGFCLEDPE---------KQGQLDWSRRYKIIGLIARGILY 374
F E V+ +++H NLV+LLG C +P LD+ R + A +LY
Sbjct: 263 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 322
Query: 375 LHED--------SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAG 426
+ + IHR+L N L+ K++DFG++++ D +
Sbjct: 323 MATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKF 381
Query: 427 TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 382 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 37/229 (16%)
Query: 255 PEGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLS 314
P G D+ S ++ EA +V + ++G+G FG VYKG + + ++
Sbjct: 21 PRGQRDS------SYYWEIEASEVMLS-----TRIGSGSFGTVYKGKWHGDVAVKILKVV 69
Query: 315 KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEKQGQLDW-------------SRR 361
+ + + F+NEV V+ K +H N++ +G+ +D W +
Sbjct: 70 DPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETK 128
Query: 362 YKIIGLI------ARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVD 415
+++ LI A+G+ YLH + IIHRD+K +NI L + KI DFG+A +
Sbjct: 129 FQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185
Query: 416 QTQGNTSRIAGTYGYMAPEYAM---HGQFSVKSDVYSFGVLVLEIITGK 461
+ G+ +MAPE + FS +SDVYS+G+++ E++TG+
Sbjct: 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 262 DLTTLESLQF-DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQ 319
DL T E+L F + ++ + +KLG G +GEVY GV +AVK L + + +
Sbjct: 13 DLGT-ENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME 71
Query: 320 GAEEFKNEVVVVAKLQHRNLVRLLGFC-LEDP--------EKQGQLDWSRRYKIIGLIAR 370
EEF E V+ +++H NLV+LLG C LE P LD+ R + A
Sbjct: 72 -VEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAV 130
Query: 371 GILYLHED--------SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTS 422
+LY+ + IHRDL N L+ K++DFG++++ D +
Sbjct: 131 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAG 190
Query: 423 RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ APE + FS+KSDV++FGVL+ EI T
Sbjct: 191 A-KFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 29/195 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
KLGAG FGEV+ G + ++AVK L K + F E ++ LQH LVRL
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 347 L-EDP-------------------EKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHR 386
E+P ++ G++ + IA G+ Y+ R IHR
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHR 133
Query: 387 DLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTY--GYMAPEYAMHGQFSVK 444
DL+ +N+L+ + KI+DFG+A++ + T+R + + APE G F++K
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 445 SDVYSFGVLVLEIIT 459
S+V+SFG+L+ EI+T
Sbjct: 191 SNVWSFGILLYEIVT 205
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 24/215 (11%)
Query: 265 TLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEE 323
T+ + +++ ++ + +KLG G +GEVY+GV +AVK L + + + EE
Sbjct: 243 TVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEE 301
Query: 324 FKNEVVVVAKLQHRNLVRLLGFCLEDPE---------KQGQLDWSRRYKIIGLIARGILY 374
F E V+ +++H NLV+LLG C +P LD+ R + A +LY
Sbjct: 302 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 361
Query: 375 LHED--------SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAG 426
+ + IHR+L N L+ K++DFG++++ D T+
Sbjct: 362 MATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAHAGA 418
Query: 427 TYG--YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ + APE + +FS+KSDV++FGVL+ EI T
Sbjct: 419 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 116/234 (49%), Gaps = 52/234 (22%)
Query: 270 QFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVL--PSGRE----IAVKRL-SKSSGQGAE 322
Q + I ++ +F +LG FG+VYKG L P+ E +A+K L K+ G E
Sbjct: 17 QAKLKEISLSAVRFM--EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE 74
Query: 323 EFKNEVVVVAKLQHRNLVRLLGFCLED-----------------------PEKQ-GQLDW 358
EF++E ++ A+LQH N+V LLG +D P G D
Sbjct: 75 EFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 134
Query: 359 SRRYK----------IIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGM 408
R K ++ IA G+ YL S ++H+DL N+L+ ++N KISD G+
Sbjct: 135 DRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGL 191
Query: 409 AK-IFGVD--QTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ ++ D + GN+ +MAPE M+G+FS+ SD++S+GV++ E+ +
Sbjct: 192 FREVYAADYYKLLGNS---LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 24/215 (11%)
Query: 265 TLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEE 323
T+ + +++ ++ + +KLG G +GEVY+GV +AVK L + + + EE
Sbjct: 201 TVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEE 259
Query: 324 FKNEVVVVAKLQHRNLVRLLGFCLEDPE---------KQGQLDWSRRYKIIGLIARGILY 374
F E V+ +++H NLV+LLG C +P LD+ R + A +LY
Sbjct: 260 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 319
Query: 375 LHED--------SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAG 426
+ + IHR+L N L+ K++DFG++++ D T+
Sbjct: 320 MATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAHAGA 376
Query: 427 TY--GYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ + APE + +FS+KSDV++FGVL+ EI T
Sbjct: 377 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 50/217 (23%)
Query: 287 NKLGAGGFGEVYKGVL--PSGRE----IAVKRL-SKSSGQGAEEFKNEVVVVAKLQHRNL 339
+LG FG+VYKG L P+ E +A+K L K+ G EEF++E ++ A+LQH N+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 340 VRLLGFCLED-----------------------PEKQ-GQLDWSRRYK----------II 365
V LLG +D P G D R K ++
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 366 GLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVD--QTQGNTS 422
IA G+ YL S ++H+DL N+L+ ++N KISD G+ + ++ D + GN+
Sbjct: 135 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS- 190
Query: 423 RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+MAPE M+G+FS+ SD++S+GV++ E+ +
Sbjct: 191 --LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 102/230 (44%), Gaps = 42/230 (18%)
Query: 257 GNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV----YKGVLP-SGREIAVK 311
G+ D D T E F +LG G FG V Y + +G +AVK
Sbjct: 1 GSEDRDPTQFEERHLKFL------------QQLGKGNFGSVEMCRYDPLQDNTGEVVAVK 48
Query: 312 RLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC-------------------LED--P 350
+L S+ + +F+ E+ ++ LQH N+V+ G C L D
Sbjct: 49 KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ 108
Query: 351 EKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK 410
+ + ++D + + I +G+ YL R IHRDL NIL++ E KI DFG+ K
Sbjct: 109 KHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK 165
Query: 411 IFGVDQTQGNTSRIAGT-YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ D+ + + APE +FSV SDV+SFGV++ E+ T
Sbjct: 166 VLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 288 KLGAGGFGEV----YKGVLP-SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
+LG G FG V Y + +G +AVK+L S+ + +F+ E+ ++ LQH N+V+
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 343 LGFC-------------------LED--PEKQGQLDWSRRYKIIGLIARGILYLHEDSRL 381
G C L D + + ++D + + I +G+ YL
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 132
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAPEYAMHGQ 440
R IHRDL NIL++ E KI DFG+ K+ D+ + + APE +
Sbjct: 133 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 192
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FSV SDV+SFGV++ E+ T
Sbjct: 193 FSVASDVWSFGVVLYELFT 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 288 KLGAGGFGEV----YKGVLP-SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
+LG G FG V Y + +G +AVK+L S+ + +F+ E+ ++ LQH N+V+
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 343 LGFC-------------------LED--PEKQGQLDWSRRYKIIGLIARGILYLHEDSRL 381
G C L D + + ++D + + I +G+ YL
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 138
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAPEYAMHGQ 440
R IHRDL NIL++ E KI DFG+ K+ D+ + + APE +
Sbjct: 139 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 198
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FSV SDV+SFGV++ E+ T
Sbjct: 199 FSVASDVWSFGVVLYELFT 217
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 30/203 (14%)
Query: 283 FSTDNKLGAGGFGEVYKG-VLPSGREIAVKRLSKSSGQGA---EEFKNEVVVVAKLQHRN 338
F N LG G F VY+ + +G E+A+K + K + A + +NEV + +L+H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 339 LVRLLGFCLEDPE---------KQGQLDWSRRYKI-----------IGLIARGILYLHED 378
++ L + ED G+++ + ++ + I G+LYLH
Sbjct: 73 ILELYNY-FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 379 SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMH 438
I+HRDL +SN+LL MN KI+DFG+A + + T + GT Y++PE A
Sbjct: 132 G---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIATR 186
Query: 439 GQFSVKSDVYSFGVLVLEIITGK 461
++SDV+S G + ++ G+
Sbjct: 187 SAHGLESDVWSLGCMFYTLLIGR 209
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 288 KLGAGGFGEV----YKGVLP-SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
+LG G FG V Y + +G +AVK+L S+ + +F+ E+ ++ LQH N+V+
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 343 LGFC-------------------LED--PEKQGQLDWSRRYKIIGLIARGILYLHEDSRL 381
G C L D + + ++D + + I +G+ YL
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 164
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAPEYAMHGQ 440
R IHRDL NIL++ E KI DFG+ K+ D+ + + APE +
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 224
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FSV SDV+SFGV++ E+ T
Sbjct: 225 FSVASDVWSFGVVLYELFT 243
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 33/200 (16%)
Query: 289 LGAGGFGEVYKGVLP-----SGREIAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
LG G FG+V +G ++AVK L +S G + K E+ ++ L H N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 343 LGFCLED---------------------PEKQGQLDWSRRYKIIGLIARGILYLHEDSRL 381
G C ED P+ + +++ ++ K I +G+ YL SR
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL--GSR- 145
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT--SRIAGTYGYMAPEYAMHG 439
+ +HRDL N+L+++E KI DFG+ K D+ R + + Y APE M
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQS 204
Query: 440 QFSVKSDVYSFGVLVLEIIT 459
+F + SDV+SFGV + E++T
Sbjct: 205 KFYIASDVWSFGVTLHELLT 224
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 288 KLGAGGFGEV----YKGVLP-SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
+LG G FG V Y + +G +AVK+L S+ + +F+ E+ ++ LQH N+V+
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 343 LGFC-------------------LED--PEKQGQLDWSRRYKIIGLIARGILYLHEDSRL 381
G C L D + + ++D + + I +G+ YL
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 131
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAPEYAMHGQ 440
R IHRDL NIL++ E KI DFG+ K+ D+ + + APE +
Sbjct: 132 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 191
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FSV SDV+SFGV++ E+ T
Sbjct: 192 FSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 288 KLGAGGFGEV----YKGVLP-SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
+LG G FG V Y + +G +AVK+L S+ + +F+ E+ ++ LQH N+V+
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 343 LGFC-------------------LED--PEKQGQLDWSRRYKIIGLIARGILYLHEDSRL 381
G C L D + + ++D + + I +G+ YL
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 137
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAPEYAMHGQ 440
R IHRDL NIL++ E KI DFG+ K+ D+ + + APE +
Sbjct: 138 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 197
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FSV SDV+SFGV++ E+ T
Sbjct: 198 FSVASDVWSFGVVLYELFT 216
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 33/200 (16%)
Query: 289 LGAGGFGEVYKGVLP-----SGREIAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
LG G FG+V +G ++AVK L +S G + K E+ ++ L H N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 343 LGFCLED---------------------PEKQGQLDWSRRYKIIGLIARGILYLHEDSRL 381
G C ED P+ + +++ ++ K I +G+ YL SR
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL--GSR- 133
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT--SRIAGTYGYMAPEYAMHG 439
+ +HRDL N+L+++E KI DFG+ K D+ R + + Y APE M
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQS 192
Query: 440 QFSVKSDVYSFGVLVLEIIT 459
+F + SDV+SFGV + E++T
Sbjct: 193 KFYIASDVWSFGVTLHELLT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 288 KLGAGGFGEV----YKGVLP-SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
+LG G FG V Y + +G +AVK+L S+ + +F+ E+ ++ LQH N+V+
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 343 LGFC-------------------LED--PEKQGQLDWSRRYKIIGLIARGILYLHEDSRL 381
G C L D + + ++D + + I +G+ YL
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 139
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAPEYAMHGQ 440
R IHRDL NIL++ E KI DFG+ K+ D+ + + APE +
Sbjct: 140 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 199
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FSV SDV+SFGV++ E+ T
Sbjct: 200 FSVASDVWSFGVVLYELFT 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 288 KLGAGGFGEV----YKGVLP-SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
+LG G FG V Y + +G +AVK+L S+ + +F+ E+ ++ LQH N+V+
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 343 LGFC-------------------LED--PEKQGQLDWSRRYKIIGLIARGILYLHEDSRL 381
G C L D + + ++D + + I +G+ YL
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 140
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAPEYAMHGQ 440
R IHRDL NIL++ E KI DFG+ K+ D+ + + APE +
Sbjct: 141 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 200
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FSV SDV+SFGV++ E+ T
Sbjct: 201 FSVASDVWSFGVVLYELFT 219
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 288 KLGAGGFGEV----YKGVLP-SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
+LG G FG V Y + +G +AVK+L S+ + +F+ E+ ++ LQH N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 343 LGFC-------------------LED--PEKQGQLDWSRRYKIIGLIARGILYLHEDSRL 381
G C L D + + ++D + + I +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 133
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAPEYAMHGQ 440
R IHRDL NIL++ E KI DFG+ K+ D+ + + APE +
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 193
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FSV SDV+SFGV++ E+ T
Sbjct: 194 FSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 288 KLGAGGFGEV----YKGVLP-SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
+LG G FG V Y + +G +AVK+L S+ + +F+ E+ ++ LQH N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 343 LGFC-------------------LED--PEKQGQLDWSRRYKIIGLIARGILYLHEDSRL 381
G C L D + + ++D + + I +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 133
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAPEYAMHGQ 440
R IHRDL NIL++ E KI DFG+ K+ D+ + + APE +
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 193
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FSV SDV+SFGV++ E+ T
Sbjct: 194 FSVASDVWSFGVVLYELFT 212
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 24/195 (12%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
++G+G FG V+ G + ++A+K + + E+F E V+ KL H LV+L G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 347 LEDPE--------KQGQL-DWSRRYK-------IIGL---IARGILYLHEDSRLRIIHRD 387
LE + G L D+ R + ++G+ + G+ YL E S +IHRD
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAS---VIHRD 128
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDV 447
L N L+ K+SDFGM + F +D +++ + +PE ++S KSDV
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 448 YSFGVLVLEIITGKK 462
+SFGVL+ E+ + K
Sbjct: 188 WSFGVLMWEVFSEGK 202
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 288 KLGAGGFGEV----YKGVLP-SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
+LG G FG V Y + +G +AVK+L S+ + +F+ E+ ++ LQH N+V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 343 LGFC-------------------LED--PEKQGQLDWSRRYKIIGLIARGILYLHEDSRL 381
G C L D + + ++D + + I +G+ YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 151
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAPEYAMHGQ 440
R IHRDL NIL++ E KI DFG+ K+ D+ + + APE +
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 211
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FSV SDV+SFGV++ E+ T
Sbjct: 212 FSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 288 KLGAGGFGEV----YKGVLP-SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
+LG G FG V Y + +G +AVK+L S+ + +F+ E+ ++ LQH N+V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 343 LGFC-------------------LED--PEKQGQLDWSRRYKIIGLIARGILYLHEDSRL 381
G C L D + + ++D + + I +G+ YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 151
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAPEYAMHGQ 440
R IHRDL NIL++ E KI DFG+ K+ D+ + + APE +
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 211
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FSV SDV+SFGV++ E+ T
Sbjct: 212 FSVASDVWSFGVVLYELFT 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 39/201 (19%)
Query: 289 LGAGGFGEVYKGV-LPSGREIAV----KRLSKSSG-QGAEEFKNEVVVVAKLQHRNLVRL 342
LG+G FG V+KGV +P G I + K + SG Q + + ++ + L H ++VRL
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 343 LGFC----------------LEDPEKQGQ--------LDWSRRYKIIGLIARGILYLHED 378
LG C L D +Q + L+W + IA+G+ YL E
Sbjct: 81 LGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYLEEH 134
Query: 379 SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMH 438
++HR+L N+LL + +++DFG+A + D Q S +MA E
Sbjct: 135 G---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 191
Query: 439 GQFSVKSDVYSFGVLVLEIIT 459
G+++ +SDV+S+GV V E++T
Sbjct: 192 GKYTHQSDVWSYGVTVWELMT 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 39/201 (19%)
Query: 289 LGAGGFGEVYKGV-LPSGREIAV----KRLSKSSG-QGAEEFKNEVVVVAKLQHRNLVRL 342
LG+G FG V+KGV +P G I + K + SG Q + + ++ + L H ++VRL
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 343 LGFC----------------LEDPEKQGQ--------LDWSRRYKIIGLIARGILYLHED 378
LG C L D +Q + L+W + IA+G+ YL E
Sbjct: 99 LGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYLEEH 152
Query: 379 SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMH 438
++HR+L N+LL + +++DFG+A + D Q S +MA E
Sbjct: 153 G---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 209
Query: 439 GQFSVKSDVYSFGVLVLEIIT 459
G+++ +SDV+S+GV V E++T
Sbjct: 210 GKYTHQSDVWSYGVTVWELMT 230
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 29/206 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSG---QGAEEFKNEVVVVAK 333
ATN S D +GAG FGEV G LPS +EI+V + G + +F E ++ +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 334 LQHRNLVRLLGFCLEDPE--------KQGQLD-WSRRY-------KIIGL---IARGILY 374
H N++RL G + + G LD + R++ +++G+ IA G+ Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAP 433
L S + +HRDL NIL+++ + K+SDFG+A++ D T+R + +P
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +F+ SDV+S+G+++ E+++
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 109/206 (52%), Gaps = 29/206 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSG---QGAEEFKNEVVVVAK 333
ATN S D +GAG FGEV G LPS +EI+V + G + +F E ++ +
Sbjct: 15 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 334 LQHRNLVRLLG--------FCLEDPEKQGQLD-WSRRY-------KIIGL---IARGILY 374
H N++RL G + + + G LD + R++ +++G+ IA G+ Y
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAP 433
L S + +HRDL NIL+++ + K+SDFG++++ D T+R + +P
Sbjct: 134 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +F+ SDV+S+G+++ E+++
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 30/199 (15%)
Query: 288 KLGAGGFGEV----YKGVLP-SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
+LG G FG V Y + +G +AVK+L S+ + +F+ E+ ++ LQH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 343 LGFCLEDPEK---------------------QGQLDWSRRYKIIGLIARGILYLHEDSRL 381
G C + + ++D + + I +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 136
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAPEYAMHGQ 440
R IHRDL NIL++ E KI DFG+ K+ D+ + + APE +
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FSV SDV+SFGV++ E+ T
Sbjct: 197 FSVASDVWSFGVVLYELFT 215
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 109/206 (52%), Gaps = 29/206 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSG---QGAEEFKNEVVVVAK 333
ATN S D +GAG FGEV G LPS +EI+V + G + +F E ++ +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 334 LQHRNLVRLLG--------FCLEDPEKQGQLD-WSRRY-------KIIGL---IARGILY 374
H N++RL G + + + G LD + R++ +++G+ IA G+ Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAP 433
L S + +HRDL NIL+++ + K+SDFG++++ D T+R + +P
Sbjct: 163 L---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +F+ SDV+S+G+++ E+++
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 92/199 (46%), Gaps = 30/199 (15%)
Query: 288 KLGAGGFGEV----YKGVLP-SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
+LG G FG V Y + +G +AVK+L S+ + +F+ E+ ++ LQH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 343 LGFCLEDPEKQGQL---------------------DWSRRYKIIGLIARGILYLHEDSRL 381
G C + +L D + + I +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL---GTK 136
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAPEYAMHGQ 440
R IHRDL NIL++ E KI DFG+ K+ D+ + + APE +
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FSV SDV+SFGV++ E+ T
Sbjct: 197 FSVASDVWSFGVVLYELFT 215
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 109/206 (52%), Gaps = 29/206 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSG---QGAEEFKNEVVVVAK 333
ATN S D +GAG FGEV G LPS +EI+V + G + +F E ++ +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 334 LQHRNLVRLLG--------FCLEDPEKQGQLD-WSRRY-------KIIGL---IARGILY 374
H N++RL G + + + G LD + R++ +++G+ IA G+ Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAP 433
L S + +HRDL NIL+++ + K+SDFG++++ D T+R + +P
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +F+ SDV+S+G+++ E+++
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 109/206 (52%), Gaps = 29/206 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSG---QGAEEFKNEVVVVAK 333
ATN S D +GAG FGEV G LPS +EI+V + G + +F E ++ +
Sbjct: 15 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 334 LQHRNLVRLLG--------FCLEDPEKQGQLD-WSRRY-------KIIGL---IARGILY 374
H N++RL G + + + G LD + R++ +++G+ IA G+ Y
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAP 433
L S + +HRDL NIL+++ + K+SDFG++++ D T+R + +P
Sbjct: 134 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +F+ SDV+S+G+++ E+++
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 29/206 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSG---QGAEEFKNEVVVVAK 333
ATN S D +GAG FGEV G LPS +EI+V + G + +F E ++ +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 334 LQHRNLVRLLGFCLEDPE--------KQGQLD-WSRRY-------KIIGL---IARGILY 374
H N++RL G + + G LD + R++ +++G+ IA G+ Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAP 433
L S + +HRDL NIL+++ + K+SDFG++++ D T+R + +P
Sbjct: 163 L---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +F+ SDV+S+G+++ E+++
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 288 KLGAGGFGEV----YKGVLP-SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
+LG G FG V Y + +G +AVK+L S+ + +F+ E+ ++ LQH N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 343 LGFC-------------------LED--PEKQGQLDWSRRYKIIGLIARGILYLHEDSRL 381
G C L D + + ++D + + I +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 133
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAPEYAMHGQ 440
R IHRDL NIL++ E KI DFG+ K+ D+ + + APE +
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESK 193
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FSV SDV+SFGV++ E+ T
Sbjct: 194 FSVASDVWSFGVVLYELFT 212
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 104/197 (52%), Gaps = 29/197 (14%)
Query: 289 LGAGGFGEVYKGVLP--SGRE---IAVKRLSKSSGQGAE-EFKNEVVVVAKLQHRNLVRL 342
+GAG FGEVYKG+L SG++ +A+K L + +F E ++ + H N++RL
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 343 LG--------FCLEDPEKQGQLDWSRRYK--------IIGL---IARGILYLHEDSRLRI 383
G + + + G LD R K ++G+ IA G+ YL + +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL---ANMNY 168
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVD-QTQGNTSRIAGTYGYMAPEYAMHGQFS 442
+HRDL NIL+++ + K+SDFG++++ D + TS + APE + +F+
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFT 228
Query: 443 VKSDVYSFGVLVLEIIT 459
SDV+SFG+++ E++T
Sbjct: 229 SASDVWSFGIVMWEVMT 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 29/206 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSG---QGAEEFKNEVVVVAK 333
ATN S D +GAG FGEV G LPS +EI+V + G + +F E ++ +
Sbjct: 32 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 90
Query: 334 LQHRNLVRLLGFCLEDPE--------KQGQLD-WSRRY-------KIIGL---IARGILY 374
H N++RL G + + G LD + R++ +++G+ IA G+ Y
Sbjct: 91 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 150
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAP 433
L S + +HRDL NIL+++ + K+SDFG++++ D T+R + +P
Sbjct: 151 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +F+ SDV+S+G+++ E+++
Sbjct: 208 EAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 29/206 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSG---QGAEEFKNEVVVVAK 333
ATN S D +GAG FGEV G LPS +EI+V + G + +F E ++ +
Sbjct: 42 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 100
Query: 334 LQHRNLVRLLGFCLEDPE--------KQGQLD-WSRRY-------KIIGL---IARGILY 374
H N++RL G + + G LD + R++ +++G+ IA G+ Y
Sbjct: 101 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 160
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAP 433
L S + +HRDL NIL+++ + K+SDFG++++ D T+R + +P
Sbjct: 161 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 217
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +F+ SDV+S+G+++ E+++
Sbjct: 218 EAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 24/195 (12%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
++G+G FG V+ G + ++A+K + + E+F E V+ KL H LV+L G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 347 LEDPE--------KQGQL-DWSRRYK-------IIGL---IARGILYLHEDSRLRIIHRD 387
LE + G L D+ R + ++G+ + G+ YL E +IHRD
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 128
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDV 447
L N L+ K+SDFGM + F +D +++ + +PE ++S KSDV
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 448 YSFGVLVLEIITGKK 462
+SFGVL+ E+ + K
Sbjct: 188 WSFGVLMWEVFSEGK 202
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 95/211 (45%), Gaps = 48/211 (22%)
Query: 289 LGAGGFGEVYKGVL------PSGREIAVKRLSK-SSGQGAEEFKNEVVVVAKLQHRNLVR 341
LG G FGEVY+G + PS ++AVK L + S Q +F E ++++KL H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 342 LLGFCLED-------------------------PEKQGQLDWSRRYKIIGLIARGILYLH 376
+G L+ P + L + IA G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIFGVDQTQGNTSRIAG----TY 428
E+ IHRD+ N LL P KI DFGMA+ D + + R G
Sbjct: 173 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 224
Query: 429 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 29/206 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSG---QGAEEFKNEVVVVAK 333
ATN S D +GAG FGEV G LPS +EI+V + G + +F E ++ +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 334 LQHRNLVRLLGFCLEDPE--------KQGQLD-WSRRY-------KIIGL---IARGILY 374
H N++RL G + + G LD + R++ +++G+ IA G+ Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAP 433
L S + +HRDL NIL+++ + K+SDFG++++ D T+R + +P
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +F+ SDV+S+G+++ E+++
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 24/195 (12%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
++G+G FG V+ G + ++A+K + + E+F E V+ KL H LV+L G C
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 347 LEDPE--------KQGQL-DWSRRYK-------IIGL---IARGILYLHEDSRLRIIHRD 387
LE + G L D+ R + ++G+ + G+ YL E +IHRD
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 126
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDV 447
L N L+ K+SDFGM + F +D +++ + +PE ++S KSDV
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 185
Query: 448 YSFGVLVLEIITGKK 462
+SFGVL+ E+ + K
Sbjct: 186 WSFGVLMWEVFSEGK 200
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 29/206 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSG---QGAEEFKNEVVVVAK 333
ATN S D +GAG FGEV G LPS +EI+V + G + +F E ++ +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 334 LQHRNLVRLLGFCLEDPE--------KQGQLD-WSRRY-------KIIGL---IARGILY 374
H N++RL G + + G LD + R++ +++G+ IA G+ Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAP 433
L S + +HRDL NIL+++ + K+SDFG++++ D T+R + +P
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +F+ SDV+S+G+++ E+++
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 95/211 (45%), Gaps = 48/211 (22%)
Query: 289 LGAGGFGEVYKGVL------PSGREIAVKRLSK-SSGQGAEEFKNEVVVVAKLQHRNLVR 341
LG G FGEVY+G + PS ++AVK L + S Q +F E ++++KL H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 342 LLGFCLED-------------------------PEKQGQLDWSRRYKIIGLIARGILYLH 376
+G L+ P + L + IA G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIFGVDQTQGNTSRIAG----TY 428
E+ IHRD+ N LL P KI DFGMA+ D + + R G
Sbjct: 159 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 210
Query: 429 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 29/206 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSG---QGAEEFKNEVVVVAK 333
ATN S D +GAG FGEV G LPS +EI+V + G + +F E ++ +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 334 LQHRNLVRLLGFCLEDPE--------KQGQLD-WSRRY-------KIIGL---IARGILY 374
H N++RL G + + G LD + R++ +++G+ IA G+ Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAP 433
L S + +HRDL NIL+++ + K+SDFG++++ D T+R + +P
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +F+ SDV+S+G+++ E+++
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 29/206 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSG---QGAEEFKNEVVVVAK 333
ATN S D +GAG FGEV G LPS +EI+V + G + +F E ++ +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 334 LQHRNLVRLLGFCLEDPE--------KQGQLD-WSRRY-------KIIGL---IARGILY 374
H N++RL G + + G LD + R++ +++G+ IA G+ Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAP 433
L S + +HRDL NIL+++ + K+SDFG++++ D T+R + +P
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +F+ SDV+S+G+++ E+++
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 24/195 (12%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
++G+G FG V+ G + ++A+K + + E+F E V+ KL H LV+L G C
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 347 LEDPE--------KQGQL-DWSRRYK-------IIGL---IARGILYLHEDSRLRIIHRD 387
LE + G L D+ R + ++G+ + G+ YL E +IHRD
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 129
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDV 447
L N L+ K+SDFGM + F +D +++ + +PE ++S KSDV
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 188
Query: 448 YSFGVLVLEIITGKK 462
+SFGVL+ E+ + K
Sbjct: 189 WSFGVLMWEVFSEGK 203
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 24/195 (12%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
++G+G FG V+ G + ++A+K + + E+F E V+ KL H LV+L G C
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 347 LEDPE--------KQGQL-DWSRRYK-------IIGL---IARGILYLHEDSRLRIIHRD 387
LE + G L D+ R + ++G+ + G+ YL E +IHRD
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 131
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDV 447
L N L+ K+SDFGM + F +D +++ + +PE ++S KSDV
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 190
Query: 448 YSFGVLVLEIITGKK 462
+SFGVL+ E+ + K
Sbjct: 191 WSFGVLMWEVFSEGK 205
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 107/206 (51%), Gaps = 29/206 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSG---QGAEEFKNEVVVVAK 333
ATN S D +GAG FGEV G LPS +EI+V + G + +F E ++ +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 334 LQHRNLVRLLGFCLEDPE--------KQGQLD-WSRRY-------KIIGL---IARGILY 374
H N++RL G + + G LD + R++ +++G+ IA G+ Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAP 433
L S + +HRDL NIL+++ + K+SDFG+ ++ D T+R + +P
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIIT 459
E + +F+ SDV+S+G+++ E+++
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 288 KLGAGGFGEV----YKGVLP-SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
+LG G FG V Y + +G +AVK+L S+ + +F+ E+ ++ LQH N+V+
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 343 LGFC-------------------LED--PEKQGQLDWSRRYKIIGLIARGILYLHEDSRL 381
G C L D + + ++D + + I +G+ YL
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 134
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAPEYAMHGQ 440
R IHR+L NIL++ E KI DFG+ K+ D+ + + APE +
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESK 194
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FSV SDV+SFGV++ E+ T
Sbjct: 195 FSVASDVWSFGVVLYELFT 213
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 98/195 (50%), Gaps = 24/195 (12%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
++G+G FG V+ G + ++A+K + + S ++F E V+ KL H LV+L G C
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 347 LEDPE--------KQGQL-DWSRRYK-------IIGL---IARGILYLHEDSRLRIIHRD 387
LE + G L D+ R + ++G+ + G+ YL E +IHRD
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 148
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDV 447
L N L+ K+SDFGM + F +D +++ + +PE ++S KSDV
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 448 YSFGVLVLEIITGKK 462
+SFGVL+ E+ + K
Sbjct: 208 WSFGVLMWEVFSEGK 222
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 283 FSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLV 340
F+ +++G G FGEVYKG+ +E+ A+K + + + E+ + E+ V+++ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 341 RLLGFCLE-----------------DPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRI 383
R G L+ D K G L+ + I+ I +G+ YLH + R
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSE---RK 137
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
IHRD+K +N+LL + + K++DFG+A + TQ + GT +MAPE +
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAG--QLTDTQIKRNXFVGTPFWMAPEVIKQSAYDF 195
Query: 444 KSDVYSFGVLVLEIITGKKNSS 465
K+D++S G+ +E+ G+ +S
Sbjct: 196 KADIWSLGITAIELAKGEPPNS 217
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 94/211 (44%), Gaps = 48/211 (22%)
Query: 289 LGAGGFGEVYKGVL------PSGREIAVKRLSK-SSGQGAEEFKNEVVVVAKLQHRNLVR 341
LG G FGEVY+G + PS ++AVK L + S Q +F E ++++K H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 342 LLGFCLED-------------------------PEKQGQLDWSRRYKIIGLIARGILYLH 376
+G L+ P + L + IA G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIFGVDQTQGNTSRIAG----TY 428
E+ IHRD+ N LL P KI DFGMA+ D + + R G
Sbjct: 173 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 224
Query: 429 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 97/223 (43%), Gaps = 48/223 (21%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL------PSGREIAVKRLSK-SSGQGAEEFKNEVV 329
+V + LG G FGEVY+G + PS ++AVK L + S Q +F E +
Sbjct: 18 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 77
Query: 330 VVAKLQHRNLVRLLGFCLED-------------------------PEKQGQLDWSRRYKI 364
+++K H+N+VR +G L+ P + L +
Sbjct: 78 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 137
Query: 365 IGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIFGVDQTQGN 420
IA G YL E+ IHRD+ N LL P KI DFGMA+ D + +
Sbjct: 138 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 189
Query: 421 TSRIAG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
R G +M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 190 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 94/211 (44%), Gaps = 48/211 (22%)
Query: 289 LGAGGFGEVYKGVL------PSGREIAVKRLSK-SSGQGAEEFKNEVVVVAKLQHRNLVR 341
LG G FGEVY+G + PS ++AVK L + S Q +F E ++++K H+N+VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 342 LLGFCLED-------------------------PEKQGQLDWSRRYKIIGLIARGILYLH 376
+G L+ P + L + IA G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIFGVDQTQGNTSRIAG----TY 428
E+ IHRD+ N LL P KI DFGMA+ D + + R G
Sbjct: 175 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 226
Query: 429 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 227 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 94/211 (44%), Gaps = 48/211 (22%)
Query: 289 LGAGGFGEVYKGVL------PSGREIAVKRLSK-SSGQGAEEFKNEVVVVAKLQHRNLVR 341
LG G FGEVY+G + PS ++AVK L + S Q +F E ++++K H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 342 LLGFCLED-------------------------PEKQGQLDWSRRYKIIGLIARGILYLH 376
+G L+ P + L + IA G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIFGVDQTQGNTSRIAG----TY 428
E+ IHRD+ N LL P KI DFGMA+ D + + R G
Sbjct: 159 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 210
Query: 429 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 94/211 (44%), Gaps = 48/211 (22%)
Query: 289 LGAGGFGEVYKGVL------PSGREIAVKRLSK-SSGQGAEEFKNEVVVVAKLQHRNLVR 341
LG G FGEVY+G + PS ++AVK L + S Q +F E ++++K H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 342 LLGFCLED-------------------------PEKQGQLDWSRRYKIIGLIARGILYLH 376
+G L+ P + L + IA G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIFGVDQTQGNTSRIAG----TY 428
E+ IHRD+ N LL P KI DFGMA+ D + + R G
Sbjct: 158 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 209
Query: 429 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 94/211 (44%), Gaps = 48/211 (22%)
Query: 289 LGAGGFGEVYKGVL------PSGREIAVKRLSK-SSGQGAEEFKNEVVVVAKLQHRNLVR 341
LG G FGEVY+G + PS ++AVK L + S Q +F E ++++K H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 342 LLGFCLED-------------------------PEKQGQLDWSRRYKIIGLIARGILYLH 376
+G L+ P + L + IA G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIFGVDQTQGNTSRIAG----TY 428
E+ IHRD+ N LL P KI DFGMA+ D + + R G
Sbjct: 158 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 209
Query: 429 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 94/211 (44%), Gaps = 48/211 (22%)
Query: 289 LGAGGFGEVYKGVL------PSGREIAVKRLSK-SSGQGAEEFKNEVVVVAKLQHRNLVR 341
LG G FGEVY+G + PS ++AVK L + S Q +F E ++++K H+N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 342 LLGFCLED-------------------------PEKQGQLDWSRRYKIIGLIARGILYLH 376
+G L+ P + L + IA G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIFGVDQTQGNTSRIAG----TY 428
E+ IHRD+ N LL P KI DFGMA+ D + + R G
Sbjct: 165 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 216
Query: 429 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 217 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 45/221 (20%)
Query: 288 KLGAGGFGEVY----KGVLPSGRE--IAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR 341
+LG G FG+V+ +LP + +AVK L ++S ++F+ E ++ LQH+++VR
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 342 LLGFCLED-----------------------PEKQ----------GQLDWSRRYKIIGLI 368
G C E P+ + G L + + +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 369 ARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQGNTSRIAGT 427
A G++YL + L +HRDL N L+ + KI DFGM++ I+ D + R
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG-GRTMLP 200
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQ 468
+M PE ++ +F+ +SDV+SFGV++ EI T K +YQ
Sbjct: 201 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ-PWYQ 240
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 94/211 (44%), Gaps = 48/211 (22%)
Query: 289 LGAGGFGEVYKGVL------PSGREIAVKRLSKS-SGQGAEEFKNEVVVVAKLQHRNLVR 341
LG G FGEVY+G + PS ++AVK L + S Q +F E ++++K H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 342 LLGFCLED-------------------------PEKQGQLDWSRRYKIIGLIARGILYLH 376
+G L+ P + L + IA G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIFGVDQTQGNTSRIAG----TY 428
E+ IHRD+ N LL P KI DFGMA+ D + + R G
Sbjct: 173 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 224
Query: 429 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 93/211 (44%), Gaps = 48/211 (22%)
Query: 289 LGAGGFGEVYKGVL------PSGREIAVKRLSK-SSGQGAEEFKNEVVVVAKLQHRNLVR 341
LG G FGEVY+G + PS ++AVK L + S Q +F E ++++K H+N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 342 LLGFCLED-------------------------PEKQGQLDWSRRYKIIGLIARGILYLH 376
+G L+ P + L + IA G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIFGVDQTQGNTSRIAG----TY 428
E+ IHRD+ N LL P KI DFGMA+ D + R G
Sbjct: 199 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAGYYRKGGCAMLPV 250
Query: 429 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 251 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 45/221 (20%)
Query: 288 KLGAGGFGEVY----KGVLPSGRE--IAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR 341
+LG G FG+V+ +LP + +AVK L ++S ++F+ E ++ LQH+++VR
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 342 LLGFCLED-----------------------PEKQ----------GQLDWSRRYKIIGLI 368
G C E P+ + G L + + +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 369 ARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQGNTSRIAGT 427
A G++YL + L +HRDL N L+ + KI DFGM++ I+ D + R
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG-GRTMLP 194
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQ 468
+M PE ++ +F+ +SDV+SFGV++ EI T K +YQ
Sbjct: 195 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ-PWYQ 234
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 94/211 (44%), Gaps = 48/211 (22%)
Query: 289 LGAGGFGEVYKGVL------PSGREIAVKRLSK-SSGQGAEEFKNEVVVVAKLQHRNLVR 341
LG G FGEVY+G + PS ++AVK L + S Q +F E ++++K H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 342 LLGFCLED-------------------------PEKQGQLDWSRRYKIIGLIARGILYLH 376
+G L+ P + L + IA G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIFGVDQTQGNTSRIAG----TY 428
E+ IHRD+ N LL P KI DFGMA+ D + + R G
Sbjct: 159 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAQ----DIYRASYYRKGGCAMLPV 210
Query: 429 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 94/211 (44%), Gaps = 48/211 (22%)
Query: 289 LGAGGFGEVYKGVL------PSGREIAVKRLSK-SSGQGAEEFKNEVVVVAKLQHRNLVR 341
LG G FGEVY+G + PS ++AVK L + S Q +F E ++++K H+N+VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 342 LLGFCLED-------------------------PEKQGQLDWSRRYKIIGLIARGILYLH 376
+G L+ P + L + IA G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIFGVDQTQGNTSRIAG----TY 428
E+ IHRD+ N LL P KI DFGMA+ D + + R G
Sbjct: 185 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 236
Query: 429 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 237 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 45/221 (20%)
Query: 288 KLGAGGFGEVY----KGVLPSGRE--IAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR 341
+LG G FG+V+ +LP + +AVK L ++S ++F+ E ++ LQH+++VR
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 342 LLGFCLED-----------------------PEKQ----------GQLDWSRRYKIIGLI 368
G C E P+ + G L + + +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 369 ARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQGNTSRIAGT 427
A G++YL + L +HRDL N L+ + KI DFGM++ I+ D + R
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG-GRTMLP 223
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQ 468
+M PE ++ +F+ +SDV+SFGV++ EI T K +YQ
Sbjct: 224 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ-PWYQ 263
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 28/203 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGVLPSGR---EIAVKRLSKSSGQG-AEEFKNEVVVVAKLQH 336
N D +LG G FG V +GV + ++A+K L + + + EE E ++ +L +
Sbjct: 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN 69
Query: 337 RNLVRLLGFCLEDP------------------EKQGQLDWSRRYKIIGLIARGILYLHED 378
+VRL+G C + K+ ++ S +++ ++ G+ YL E
Sbjct: 70 PYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK 129
Query: 379 SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTY--GYMAPEYA 436
+ +HRDL N+LL KISDFG++K G D + T+R AG + + APE
Sbjct: 130 N---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY-YTARSAGKWPLKWYAPECI 185
Query: 437 MHGQFSVKSDVYSFGVLVLEIIT 459
+FS +SDV+S+GV + E ++
Sbjct: 186 NFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 93/211 (44%), Gaps = 48/211 (22%)
Query: 289 LGAGGFGEVYKGVL------PSGREIAVKRLSK-SSGQGAEEFKNEVVVVAKLQHRNLVR 341
LG G FGEVY+G + PS ++AVK L + S Q +F E ++++K H+N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 342 LLGFCLED-------------------------PEKQGQLDWSRRYKIIGLIARGILYLH 376
+G L+ P + L + IA G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIFGVDQTQGNTSRIAG----TY 428
E+ IHRD+ N LL P KI DFGMA+ D + R G
Sbjct: 176 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAGYYRKGGCAMLPV 227
Query: 429 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 228 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 51/223 (22%)
Query: 288 KLGAGGFGEVYKG----VLPSGRE--IAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR 341
+LG G FG+V+ + P+ + +AVK L + ++F+ E ++ LQH ++V+
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 342 LLGFCLE-DP---------------------------------EKQGQLDWSRRYKIIGL 367
G C + DP + +G+L S+ I
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAG- 426
IA G++YL + +HRDL N L+ A + KI DFGM++ D + R+ G
Sbjct: 142 IASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR----DVYSTDYYRVGGH 194
Query: 427 ---TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSF 466
+M PE M+ +F+ +SDV+SFGV++ EI T K F
Sbjct: 195 TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWF 237
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 30/204 (14%)
Query: 281 NKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRL---SKSSGQGAEEFKNEVVVVAKLQHR 337
K+ K+G G +G VYK GR +A+KR+ ++ G + + E+ ++ +L H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR-EISLLKELHHP 79
Query: 338 NLVRLLGF-----CLE--------------DPEKQGQLDWSRRYKIIGLIARGILYLHED 378
N+V L+ CL D K G D + + L+ RG+ + H+
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLL-RGVAHCHQH 138
Query: 379 SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM- 437
RI+HRDLK N+L++++ K++DFG+A+ FG+ + T + T Y AP+ M
Sbjct: 139 ---RILHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVV-TLWYRAPDVLMG 193
Query: 438 HGQFSVKSDVYSFGVLVLEIITGK 461
++S D++S G + E+ITGK
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 30/204 (14%)
Query: 281 NKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRL---SKSSGQGAEEFKNEVVVVAKLQHR 337
K+ K+G G +G VYK GR +A+KR+ ++ G + + E+ ++ +L H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR-EISLLKELHHP 79
Query: 338 NLVRLLGF-----CLE--------------DPEKQGQLDWSRRYKIIGLIARGILYLHED 378
N+V L+ CL D K G D + + L+ RG+ + H+
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLL-RGVAHCHQH 138
Query: 379 SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM- 437
RI+HRDLK N+L++++ K++DFG+A+ FG+ + T + T Y AP+ M
Sbjct: 139 ---RILHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVV-TLWYRAPDVLMG 193
Query: 438 HGQFSVKSDVYSFGVLVLEIITGK 461
++S D++S G + E+ITGK
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 101/233 (43%), Gaps = 34/233 (14%)
Query: 253 AVPEGNADNDLTTLESLQFDFEAIK--VATNKFSTDNKLGAGGFGEVYKGVLPSGREI-A 309
+ PE N + +L S Q + E+ K A F LG G FG VY + I A
Sbjct: 7 SAPENNPEEELA---SKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA 63
Query: 310 VKRLSKSSGQGA---EEFKNEVVVVAKLQHRNLVRLLGF------------------CLE 348
+K L K+ + A + + EV + + L+H N++RL G+
Sbjct: 64 LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR 123
Query: 349 DPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGM 408
+ +K + D R I +A + Y H R+IHRD+K N+LL + KI+DFG
Sbjct: 124 ELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG- 179
Query: 409 AKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
+ V + + GT Y+ PE K D++S GVL E + GK
Sbjct: 180 ---WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 36/209 (17%)
Query: 289 LGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFCL 347
LG G FG+ K +G + +K L + + F EV V+ L+H N+++ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 348 EDPE-------------------KQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDL 388
+D Q WS+R IA G+ YLH + IIHRDL
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDL 134
Query: 389 KVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSR------------IAGTYGYMAPEYA 436
N L+ N ++DFG+A++ ++TQ R + G +MAPE
Sbjct: 135 NSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMI 194
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGKKNSS 465
+ K DV+SFG+++ EII G+ N+
Sbjct: 195 NGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 49/222 (22%)
Query: 288 KLGAGGFGEVYKG----VLPSGREI--AVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR 341
+LG G FG+V+ + P +I AVK L +S ++F E ++ LQH ++V+
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 342 LLGFCLE-DP-------EKQGQLD-----------------------WSRRYKIIGLIAR 370
G C+E DP K G L+ S+ I IA
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAG---- 426
G++YL + +HRDL N L+ + KI DFGM++ D + R+ G
Sbjct: 140 GMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR----DVYSTDYYRVGGHTML 192
Query: 427 TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQ 468
+M PE M+ +F+ +SDV+S GV++ EI T K +YQ
Sbjct: 193 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK-QPWYQ 233
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 30/209 (14%)
Query: 277 KVATNKFSTDNKLGAGGFGEVY---KGVLPSGREIAVKRL---SKSSGQGAEEFKNEVVV 330
K+ ++ +KLG GG VY +L ++A+K + + + + F+ EV
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLAEDTIL--NIKVAIKAIFIPPREKEETLKRFEREVHN 64
Query: 331 VAKLQHRNLVRLLGFCLEDP------------------EKQGQLDWSRRYKIIGLIARGI 372
++L H+N+V ++ ED E G L I GI
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGI 124
Query: 373 LYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMA 432
+ H+ +RI+HRD+K NIL+D+ KI DFG+AK + + T+ + GT Y +
Sbjct: 125 KHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQYFS 180
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
PE A +D+YS G+++ E++ G+
Sbjct: 181 PEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 34/228 (14%)
Query: 262 DLTTLESLQFDFEAIKVAT------NKFSTDNKLGAGGFGEVYKGVLPSGR---EIAVKR 312
D + ES D E +K N D +LG G FG V +GV + ++A+K
Sbjct: 311 DTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKV 370
Query: 313 LSKSSGQG-AEEFKNEVVVVAKLQHRNLVRLLGFCLEDP------------------EKQ 353
L + + + EE E ++ +L + +VRL+G C + K+
Sbjct: 371 LKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKR 430
Query: 354 GQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFG 413
++ S +++ ++ G+ YL E + +HR+L N+LL KISDFG++K G
Sbjct: 431 EEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALG 487
Query: 414 VDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
D + T+R AG + + APE +FS +SDV+S+GV + E ++
Sbjct: 488 ADDSY-YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 100/233 (42%), Gaps = 34/233 (14%)
Query: 253 AVPEGNADNDLTTLESLQFDFEAIK--VATNKFSTDNKLGAGGFGEVYKGVLPSGREI-A 309
+ PE N + +L S Q + E+ K A F LG G FG VY + I A
Sbjct: 7 SAPENNPEEELA---SKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA 63
Query: 310 VKRLSKSSGQGA---EEFKNEVVVVAKLQHRNLVRLLGF------------------CLE 348
+K L K+ + A + + EV + + L+H N++RL G+
Sbjct: 64 LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR 123
Query: 349 DPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGM 408
+ +K + D R I +A + Y H R+IHRD+K N+LL + KI+DFG
Sbjct: 124 ELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG- 179
Query: 409 AKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
+ V + GT Y+ PE K D++S GVL E + GK
Sbjct: 180 ---WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G +GEV V E +AVK + K + E K E+ + A L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGH- 73
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 74 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 126
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 187 EPVDVWSCGIVLTAMLAGE 205
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 24/202 (11%)
Query: 283 FSTDNKLGAGGFGEVYKGVL-PSGREIAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLV 340
F+ K+G G FGEV+KG+ + + +A+K + + + E+ + E+ V+++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 341 RLLGFCLEDPE-----------------KQGQLDWSRRYKIIGLIARGILYLHEDSRLRI 383
+ G L+D + + G LD ++ I+ I +G+ YLH + +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK--- 125
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
IHRD+K +N+LL K++DFG+A Q + NT GT +MAPE +
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDS 183
Query: 444 KSDVYSFGVLVLEIITGKKNSS 465
K+D++S G+ +E+ G+ S
Sbjct: 184 KADIWSLGITAIELARGEPPHS 205
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 24/202 (11%)
Query: 283 FSTDNKLGAGGFGEVYKGVLP-SGREIAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLV 340
F+ K+G G FGEV+KG+ + + +A+K + + + E+ + E+ V+++ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 341 RLLGFCLEDPE-----------------KQGQLDWSRRYKIIGLIARGILYLHEDSRLRI 383
+ G L+D + + G LD ++ I+ I +G+ YLH + +
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK--- 145
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
IHRD+K +N+LL K++DFG+A Q + NT GT +MAPE +
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDS 203
Query: 444 KSDVYSFGVLVLEIITGKKNSS 465
K+D++S G+ +E+ G+ S
Sbjct: 204 KADIWSLGITAIELARGEPPHS 225
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 37/223 (16%)
Query: 271 FDFEAIKVATNKFS---------TDNKLGAGGFGEVYKGVL--PSGREIAVKRLSKSSG- 318
F FE A +F+ + +G G FGEV G L P REI V + +G
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 319 --QGAEEFKNEVVVVAKLQHRNLVRLLG--------FCLEDPEKQGQLDW-----SRRYK 363
+ +F +E ++ + H N++ L G + + + G LD R+
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 364 IIGL------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQT 417
+I L I G+ YL S + +HRDL NIL+++ + K+SDFGM+++ D
Sbjct: 130 VIQLVGMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE 186
Query: 418 QGNTSRIAGT-YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
T+R + APE + +F+ SDV+S+G+++ E+++
Sbjct: 187 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 48/223 (21%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL-------PSGREIAVKRLSKSSGQGAE-EFKNEV 328
+VA K + +LG G FG VY+GV P R +A+K +++++ EF NE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 73
Query: 329 VVVAKLQHRNLVRLLGFC----------------------------LEDPEKQGQLDWSR 360
V+ + ++VRLLG +E+ S+
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 361 RYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGN 420
++ G IA G+ YL+ + + +HRDL N ++ + KI DFGM + D + +
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETD 186
Query: 421 TSRIAG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
R G +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 187 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 48/223 (21%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL-------PSGREIAVKRLSKSSGQGAE-EFKNEV 328
+VA K + +LG G FG VY+GV P R +A+K +++++ EF NE
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 64
Query: 329 VVVAKLQHRNLVRLLGFC----------------------------LEDPEKQGQLDWSR 360
V+ + ++VRLLG +E+ S+
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 124
Query: 361 RYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGN 420
++ G IA G+ YL+ + + +HRDL N ++ + KI DFGM + D + +
Sbjct: 125 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETD 177
Query: 421 TSRIAG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
R G +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 178 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 112/219 (51%), Gaps = 33/219 (15%)
Query: 268 SLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVL--PSGRE--IAVKRLSKS-SGQGAE 322
S++F A ++ + + +GAG FGEV +G L P +E +A+K L + +
Sbjct: 4 SMEF---AKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRR 60
Query: 323 EFKNEVVVVAKLQHRNLVRLLG--------FCLEDPEKQGQLDWSRRY--------KIIG 366
EF +E ++ + +H N++RL G L + + G LD R +++G
Sbjct: 61 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVG 120
Query: 367 L---IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGN-TS 422
+ IA G+ YL E + +HRDL NIL+++ + K+SDFG+++ + + TS
Sbjct: 121 MLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTS 177
Query: 423 RIAGTYG--YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ G + APE +F+ SD +S+G+++ E+++
Sbjct: 178 SLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 100/198 (50%), Gaps = 23/198 (11%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLV 340
K++ K+G G G VY + + +G+E+A+++++ E NE++V+ + ++ N+V
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 341 RLL-----------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRI 383
L G L D + +D + + + + +LH + ++
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QV 137
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
IHRD+K NILL + + K++DFG +Q++ +T + GT +MAPE +
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGP 195
Query: 444 KSDVYSFGVLVLEIITGK 461
K D++S G++ +E+I G+
Sbjct: 196 KVDIWSLGIMAIEMIEGE 213
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 126 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLPPEMI 178
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 29/214 (13%)
Query: 278 VATNKFSTDNKLGAGGFGEVYKGVLPSGR----EIAVKRLSKS-SGQGAEEFKNEVVVVA 332
+A + LG G FGEVY+GV + + +AVK K + E+F +E V++
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 333 KLQHRNLVRLLGFCLEDPE-------KQGQL-DWSRR----YKIIGL------IARGILY 374
L H ++V+L+G E+P G+L + R K++ L I + + Y
Sbjct: 65 NLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAY 124
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQGNTSRIAGTYGYMAP 433
L + +HRD+ V NIL+ + K+ DFG+++ I D + + +R+ +M+P
Sbjct: 125 LES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSP 179
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFY 467
E +F+ SDV+ F V + EI++ K F+
Sbjct: 180 ESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 213
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 99/198 (50%), Gaps = 23/198 (11%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLV 340
K++ K+G G G VY + + +G+E+A+++++ E NE++V+ + ++ N+V
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 341 RLL-----------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRI 383
L G L D + +D + + + + +LH + ++
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QV 137
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
IHRD+K NILL + + K++DFG +Q++ S + GT +MAPE +
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWMAPEVVTRKAYGP 195
Query: 444 KSDVYSFGVLVLEIITGK 461
K D++S G++ +E+I G+
Sbjct: 196 KVDIWSLGIMAIEMIEGE 213
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 110/222 (49%), Gaps = 30/222 (13%)
Query: 263 LTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVL-PSGREIAVKRLS-KSSGQG 320
L +++L+ D E + F+ K+G G FGEV+KG+ + + +A+K + + +
Sbjct: 10 LPGMQNLKADPEEL------FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDE 63
Query: 321 AEEFKNEVVVVAKLQHRNLVRLLGFCLEDPE-----------------KQGQLDWSRRYK 363
E+ + E+ V+++ + + G L+D + + G LD ++
Sbjct: 64 IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIAT 123
Query: 364 IIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSR 423
I+ I +G+ YLH + + IHRD+K +N+LL K++DFG+A + TQ +
Sbjct: 124 ILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAG--QLTDTQIKRNX 178
Query: 424 IAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSS 465
GT +MAPE + K+D++S G+ +E+ G+ S
Sbjct: 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHS 220
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 28/196 (14%)
Query: 289 LGAGGFGEVYKGVL--PSGREIAVKRLSKSSG---QGAEEFKNEVVVVAKLQHRNLVRLL 343
+G G FGEV G L P REI V + +G + +F +E ++ + H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 344 G--------FCLEDPEKQGQLDW-----SRRYKIIGL------IARGILYLHEDSRLRII 384
G + + + G LD R+ +I L I G+ YL S + +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL---SDMSYV 138
Query: 385 HRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAPEYAMHGQFSV 443
HRDL NIL+++ + K+SDFGM+++ D T+R + APE + +F+
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTS 198
Query: 444 KSDVYSFGVLVLEIIT 459
SDV+S+G+++ E+++
Sbjct: 199 ASDVWSYGIVMWEVMS 214
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 36/210 (17%)
Query: 278 VATNKFSTDNKLGAGGFGEVY--KGVLPSGREIAVKRLSKSSGQ---GAEEFKNEVVVVA 332
+ ++++ LG G FGEV K + +G+E AVK +SK + E EV ++
Sbjct: 29 IFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 333 KLQHRNLVRLLGFCLEDP-------------EKQGQLDWSRRY------KIIGLIARGIL 373
+L H N+++L F ED E ++ +R+ +II + GI
Sbjct: 88 QLDHPNIMKLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 146
Query: 374 YLHEDSRLRIIHRDLKVSNILLDA---EMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGY 430
Y+H++ +I+HRDLK N+LL++ + N +I DFG++ F + + GT Y
Sbjct: 147 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYY 200
Query: 431 MAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
+APE +HG + K DV+S GV++ +++G
Sbjct: 201 IAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 28/196 (14%)
Query: 289 LGAGGFGEVYKGVL--PSGREIAVKRLSKSSG---QGAEEFKNEVVVVAKLQHRNLVRLL 343
+G G FGEV G L P REI V + +G + +F +E ++ + H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 344 G--------FCLEDPEKQGQLDW-----SRRYKIIGL------IARGILYLHEDSRLRII 384
G + + + G LD R+ +I L I G+ YL S + +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL---SDMSYV 132
Query: 385 HRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YGYMAPEYAMHGQFSV 443
HRDL NIL+++ + K+SDFGM+++ D T+R + APE + +F+
Sbjct: 133 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTS 192
Query: 444 KSDVYSFGVLVLEIIT 459
SDV+S+G+++ E+++
Sbjct: 193 ASDVWSYGIVMWEVMS 208
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 129 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 181
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 143 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 195
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 196 EGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 29/214 (13%)
Query: 278 VATNKFSTDNKLGAGGFGEVYKGVLPSGR----EIAVKRLSKS-SGQGAEEFKNEVVVVA 332
+A + LG G FGEVY+GV + + +AVK K + E+F +E V++
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 333 KLQHRNLVRLLGFCLEDPE-------KQGQL-DWSRR----YKIIGL------IARGILY 374
L H ++V+L+G E+P G+L + R K++ L I + + Y
Sbjct: 69 NLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAY 128
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQGNTSRIAGTYGYMAP 433
L + +HRD+ V NIL+ + K+ DFG+++ I D + + +R+ +M+P
Sbjct: 129 LES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSP 183
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFY 467
E +F+ SDV+ F V + EI++ K F+
Sbjct: 184 ESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 217
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 89/205 (43%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ ++ +K + D R I +A + Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 131 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 183
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 29/214 (13%)
Query: 278 VATNKFSTDNKLGAGGFGEVYKGVLPSGR----EIAVKRLSKS-SGQGAEEFKNEVVVVA 332
+A + LG G FGEVY+GV + + +AVK K + E+F +E V++
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 333 KLQHRNLVRLLGFCLEDPE-------KQGQL-DWSRR----YKIIGL------IARGILY 374
L H ++V+L+G E+P G+L + R K++ L I + + Y
Sbjct: 81 NLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAY 140
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQGNTSRIAGTYGYMAP 433
L + +HRD+ V NIL+ + K+ DFG+++ I D + + +R+ +M+P
Sbjct: 141 LES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSP 195
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFY 467
E +F+ SDV+ F V + EI++ K F+
Sbjct: 196 ESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 229
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 36/210 (17%)
Query: 278 VATNKFSTDNKLGAGGFGEVY--KGVLPSGREIAVKRLSKSSGQ---GAEEFKNEVVVVA 332
+ ++++ LG G FGEV K + +G+E AVK +SK + E EV ++
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 333 KLQHRNLVRLLGFCLEDP-------------EKQGQLDWSRRY------KIIGLIARGIL 373
+L H N+++L F ED E ++ +R+ +II + GI
Sbjct: 82 QLDHPNIMKLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 140
Query: 374 YLHEDSRLRIIHRDLKVSNILLDA---EMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGY 430
Y+H++ +I+HRDLK N+LL++ + N +I DFG++ F + + GT Y
Sbjct: 141 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYY 194
Query: 431 MAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
+APE +HG + K DV+S GV++ +++G
Sbjct: 195 IAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 99/198 (50%), Gaps = 23/198 (11%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLV 340
K++ K+G G G VY + + +G+E+A+++++ E NE++V+ + ++ N+V
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 341 RLL-----------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRI 383
L G L D + +D + + + + +LH + ++
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QV 137
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
IHRD+K NILL + + K++DFG +Q++ S + GT +MAPE +
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGP 195
Query: 444 KSDVYSFGVLVLEIITGK 461
K D++S G++ +E+I G+
Sbjct: 196 KVDIWSLGIMAIEMIEGE 213
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 247 AKKKYNAVPEGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGR 306
A K +A P + D L+ + D ++ LG GGF + Y+ +
Sbjct: 9 AIAKPSAKPSAHVDPKSAPLKEIP-DVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTK 67
Query: 307 EI-AVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEKQGQLDWSRRY 362
E+ A K + KS E+ E+ + L + ++V GF +D L+ RR
Sbjct: 68 EVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRR 127
Query: 363 KIIGLIAR------------------GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKIS 404
++ L R G+ YLH + R+IHRDLK+ N+ L+ +M+ KI
Sbjct: 128 SLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIG 184
Query: 405 DFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
DFG+A D + T + GT Y+APE S + D++S G ++ ++ GK
Sbjct: 185 DFGLATKIEFDGERKKT--LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 108/212 (50%), Gaps = 30/212 (14%)
Query: 275 AIKVATNKFSTDNKLGAGGFGEVYKGVL--PSGRE--IAVKRLSKS-SGQGAEEFKNEVV 329
A ++ + + +GAG FGEV +G L P +E +A+K L + + EF +E
Sbjct: 10 AKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEAS 69
Query: 330 VVAKLQHRNLVRLLG--------FCLEDPEKQGQLDWSRRY--------KIIGL---IAR 370
++ + +H N++RL G L + + G LD R +++G+ IA
Sbjct: 70 IMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIAS 129
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQG-NTSRIAGTYG 429
G+ YL E + +HRDL NIL+++ + K+SDFG+++ + + TS + G
Sbjct: 130 GMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIP 186
Query: 430 --YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ APE +F+ SD +S+G+++ E+++
Sbjct: 187 IRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 32/201 (15%)
Query: 287 NKLGAGGFGEV----YKGVLP-SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR 341
++LG G FG V Y + +G +AVK+L S +F+ E+ ++ L +V+
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 342 LLGF-------------------CLED--PEKQGQLDWSRRYKIIGLIARGILYLHEDSR 380
G CL D + +LD SR I +G+ YL SR
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL--GSR 130
Query: 381 LRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMH 438
R +HRDL NIL+++E + KI+DFG+AK+ +D+ R G + APE
Sbjct: 131 -RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDX-XVVREPGQSPIFWYAPESLSD 188
Query: 439 GQFSVKSDVYSFGVLVLEIIT 459
FS +SDV+SFGV++ E+ T
Sbjct: 189 NIFSRQSDVWSFGVVLYELFT 209
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 32/199 (16%)
Query: 289 LGAGGFGEVYKGVL--PSGREI--AVKRLSKSSGQG-AEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG VY G L G++I AVK L++ + G +F E +++ H N++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 344 GFCLEDP---------EKQGQLDWSRRYK--------IIGL---IARGILYLHEDSRLRI 383
G CL K G L R + +IG +A+G+ YL + +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 153
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT---YGYMAPEYAMHGQ 440
+HRDL N +LD + K++DFG+A+ D+ + G +MA E +
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEXXSVHNKTGAKLPVKWMALESLQTQK 212
Query: 441 FSVKSDVYSFGVLVLEIIT 459
F+ KSDV+SFGVL+ E++T
Sbjct: 213 FTTKSDVWSFGVLLWELMT 231
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 126 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 178
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 129 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMI 181
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 131 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 183
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 39/225 (17%)
Query: 271 FDFEAIKVATNKFS---------TDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSG- 318
F FE A +F+ + +GAG FGEV G LP REI V + SG
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 319 --QGAEEFKNEVVVVAKLQHRNLVRLLG--------FCLEDPEKQGQLDWSRR------- 361
+ +F +E ++ + H N++ L G + + + G LD R
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 362 -YKIIGL---IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQT 417
+++G+ IA G+ YL + + +HRDL NIL+++ + K+SDFG+++ D +
Sbjct: 134 VIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 190
Query: 418 QGN-TSRIAGTYG--YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
TS + G + APE + +F+ SDV+S+G+++ E+++
Sbjct: 191 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 127 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMI 179
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G +GEV V E +AVK + K + E K E+ + L H N+V+ G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 71
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 72 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 124
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 185 EPVDVWSCGIVLTAMLAGE 203
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 126 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMI 178
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 126 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMI 178
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 99/198 (50%), Gaps = 23/198 (11%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLV 340
K++ K+G G G VY + + +G+E+A+++++ E NE++V+ + ++ N+V
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 341 RLL-----------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRI 383
L G L D + +D + + + + +LH + ++
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QV 138
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
IHRD+K NILL + + K++DFG +Q++ S + GT +MAPE +
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGP 196
Query: 444 KSDVYSFGVLVLEIITGK 461
K D++S G++ +E+I G+
Sbjct: 197 KVDIWSLGIMAIEMIEGE 214
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G +GEV V E +AVK + K + E K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 73 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G +GEV V E +AVK + K + E K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 73 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G +GEV V E +AVK + K + E K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 73 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G +GEV V E +AVK + K + E K E+ + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 74 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 126
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 187 EPVDVWSCGIVLTAMLAGE 205
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 32/201 (15%)
Query: 287 NKLGAGGFGEV----YKGVLP-SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR 341
++LG G FG V Y + +G +AVK+L S +F+ E+ ++ L +V+
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 342 LLGF-------------------CLED--PEKQGQLDWSRRYKIIGLIARGILYLHEDSR 380
G CL D + +LD SR I +G+ YL SR
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL--GSR 133
Query: 381 LRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMH 438
R +HRDL NIL+++E + KI+DFG+AK+ +D+ R G + APE
Sbjct: 134 -RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY-YVVREPGQSPIFWYAPESLSD 191
Query: 439 GQFSVKSDVYSFGVLVLEIIT 459
FS +SDV+SFGV++ E+ T
Sbjct: 192 NIFSRQSDVWSFGVVLYELFT 212
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 131 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMI 183
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G +GEV V E +AVK + K + E K E+ + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 74 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 126
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 187 EPVDVWSCGIVLTAMLAGE 205
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G +GEV V E +AVK + K + E K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 73 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G +GEV V E +AVK + K + E K E+ + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 74 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 126
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 187 EPVDVWSCGIVLTAMLAGE 205
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 125 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 177
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 178 EGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 131 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEXI 183
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 184 EGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 87/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + GT Y+ PE
Sbjct: 128 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMI 180
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 32/201 (15%)
Query: 287 NKLGAGGFGEV----YKGVLP-SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR 341
++LG G FG V Y + +G +AVK+L S +F+ E+ ++ L +V+
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 342 LLGF-------------------CLED--PEKQGQLDWSRRYKIIGLIARGILYLHEDSR 380
G CL D + +LD SR I +G+ YL SR
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL--GSR 146
Query: 381 LRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMH 438
R +HRDL NIL+++E + KI+DFG+AK+ +D+ R G + APE
Sbjct: 147 -RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY-YVVREPGQSPIFWYAPESLSD 204
Query: 439 GQFSVKSDVYSFGVLVLEIIT 459
FS +SDV+SFGV++ E+ T
Sbjct: 205 NIFSRQSDVWSFGVVLYELFT 225
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G +GEV V E +AVK + K + E K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 73 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 42/220 (19%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL-------PSGREIAVKRLSKSSGQGAE-EFKNEV 328
+VA K + +LG G FG VY+GV P R +A+K +++++ EF NE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 73
Query: 329 VVVAKLQHRNLVRLLGFC----------------------------LEDPEKQGQLDWSR 360
V+ + ++VRLLG +E+ S+
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 361 RYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQG 419
++ G IA G+ YL+ + + +HRDL N ++ + KI DFGM + I+ D +
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 190
Query: 420 NTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 191 GGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G +GEV V E +AVK + K + E K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 73 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ ++ +K + D R I +A + Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + GT Y+ PE
Sbjct: 131 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDYLPPEMI 183
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 126 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLPPEMI 178
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G +GEV V E +AVK + K + E K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH- 72
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 73 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G +GEV V E +AVK + K + E K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 73 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 24/202 (11%)
Query: 283 FSTDNKLGAGGFGEVYKGVL-PSGREIAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLV 340
F+ K+G G FGEV+KG+ + + +A+K + + + E+ + E+ V+++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 341 RLLGFCLEDPE-----------------KQGQLDWSRRYKIIGLIARGILYLHEDSRLRI 383
+ G L+D + + G LD ++ I+ I +G+ YLH + +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK--- 125
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
IHRD+K +N+LL K++DFG+A + TQ + GT +MAPE +
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAG--QLTDTQIKRNXFVGTPFWMAPEVIKQSAYDS 183
Query: 444 KSDVYSFGVLVLEIITGKKNSS 465
K+D++S G+ +E+ G+ S
Sbjct: 184 KADIWSLGITAIELARGEPPHS 205
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 36/210 (17%)
Query: 278 VATNKFSTDNKLGAGGFGEVY--KGVLPSGREIAVKRLSK---SSGQGAEEFKNEVVVVA 332
+ ++++ LG G FGEV K + +G+E AVK +SK E EV ++
Sbjct: 46 IFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLK 104
Query: 333 KLQHRNLVRLLGFCLEDP-------------EKQGQLDWSRRY------KIIGLIARGIL 373
+L H N+++L F ED E ++ +R+ +II + GI
Sbjct: 105 QLDHPNIMKLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 163
Query: 374 YLHEDSRLRIIHRDLKVSNILLDA---EMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGY 430
Y+H++ +I+HRDLK N+LL++ + N +I DFG++ F + + GT Y
Sbjct: 164 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYY 217
Query: 431 MAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
+APE +HG + K DV+S GV++ +++G
Sbjct: 218 IAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G +GEV V E +AVK + K + E K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 73 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 38/202 (18%)
Query: 289 LGAGGFGEVYKGVL--PSGREI--AVKRLSKSSGQG-AEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG VY G L G++I AVK L++ + G +F E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 344 GFCLEDP---------EKQGQLDWSRRYK--------IIGL---IARGILYLHEDSRLRI 383
G CL K G L R + +IG +A+G+ YL + +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 154
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAK------IFGVDQTQGNTSRIAGTYGYMAPEYAM 437
+HRDL N +LD + K++DFG+A+ + V G + +MA E
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK----WMALESLQ 210
Query: 438 HGQFSVKSDVYSFGVLVLEIIT 459
+F+ KSDV+SFGVL+ E++T
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT 232
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 38/202 (18%)
Query: 289 LGAGGFGEVYKGVL--PSGREI--AVKRLSKSSGQG-AEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG VY G L G++I AVK L++ + G +F E +++ H N++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 344 GFCLEDP---------EKQGQLDWSRRYK--------IIGL---IARGILYLHEDSRLRI 383
G CL K G L R + +IG +A+G+ YL + +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 153
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAK------IFGVDQTQGNTSRIAGTYGYMAPEYAM 437
+HRDL N +LD + K++DFG+A+ + V G + +MA E
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK----WMALESLQ 209
Query: 438 HGQFSVKSDVYSFGVLVLEIIT 459
+F+ KSDV+SFGVL+ E++T
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMT 231
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G +GEV V E +AVK + K + E K E+ + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 74 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 126
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 187 EPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G +GEV V E +AVK + K + E K E+ + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 74 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 126
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 187 EPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G +GEV V E +AVK + K + E K E+ + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 74 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 126
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 187 EPVDVWSCGIVLTAMLAGE 205
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 38/202 (18%)
Query: 289 LGAGGFGEVYKGVL--PSGREI--AVKRLSKSSGQG-AEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG VY G L G++I AVK L++ + G +F E +++ H N++ LL
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 344 GFCLEDP---------EKQGQLDWSRRYK--------IIGL---IARGILYLHEDSRLRI 383
G CL K G L R + +IG +A+G+ YL + +
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 146
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAK------IFGVDQTQGNTSRIAGTYGYMAPEYAM 437
+HRDL N +LD + K++DFG+A+ + V G + +MA E
Sbjct: 147 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK----WMALESLQ 202
Query: 438 HGQFSVKSDVYSFGVLVLEIIT 459
+F+ KSDV+SFGVL+ E++T
Sbjct: 203 TQKFTTKSDVWSFGVLLWELMT 224
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 87/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + GT Y+ PE
Sbjct: 127 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEMI 179
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 32/201 (15%)
Query: 287 NKLGAGGFGEV----YKGVLP-SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR 341
++LG G FG V Y + +G +AVK+L S +F+ E+ ++ L +V+
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 342 LLGF-------------------CLED--PEKQGQLDWSRRYKIIGLIARGILYLHEDSR 380
G CL D + +LD SR I +G+ YL SR
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL--GSR 134
Query: 381 LRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMH 438
R +HRDL NIL+++E + KI+DFG+AK+ +D+ R G + APE
Sbjct: 135 -RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY-YVVREPGQSPIFWYAPESLSD 192
Query: 439 GQFSVKSDVYSFGVLVLEIIT 459
FS +SDV+SFGV++ E+ T
Sbjct: 193 NIFSRQSDVWSFGVVLYELFT 213
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 38/202 (18%)
Query: 289 LGAGGFGEVYKGVL--PSGREI--AVKRLSKSSGQG-AEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG VY G L G++I AVK L++ + G +F E +++ H N++ LL
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 344 GFCLEDP---------EKQGQLDWSRRYK--------IIGL---IARGILYLHEDSRLRI 383
G CL K G L R + +IG +A+G+ YL + +
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 172
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAK------IFGVDQTQGNTSRIAGTYGYMAPEYAM 437
+HRDL N +LD + K++DFG+A+ + V G + +MA E
Sbjct: 173 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK----WMALESLQ 228
Query: 438 HGQFSVKSDVYSFGVLVLEIIT 459
+F+ KSDV+SFGVL+ E++T
Sbjct: 229 TQKFTTKSDVWSFGVLLWELMT 250
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 38/202 (18%)
Query: 289 LGAGGFGEVYKGVL--PSGREI--AVKRLSKSSGQG-AEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG VY G L G++I AVK L++ + G +F E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 344 GFCLEDP---------EKQGQLDWSRRYK--------IIGL---IARGILYLHEDSRLRI 383
G CL K G L R + +IG +A+G+ YL + +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 154
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAK------IFGVDQTQGNTSRIAGTYGYMAPEYAM 437
+HRDL N +LD + K++DFG+A+ + V G + +MA E
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK----WMALESLQ 210
Query: 438 HGQFSVKSDVYSFGVLVLEIIT 459
+F+ KSDV+SFGVL+ E++T
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT 232
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 42/220 (19%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL-------PSGREIAVKRLSKSSGQGAE-EFKNEV 328
+VA K + +LG G FG VY+GV P R +A+K +++++ EF NE
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 79
Query: 329 VVVAKLQHRNLVRLLGFC----------------------------LEDPEKQGQLDWSR 360
V+ + ++VRLLG +E+ S+
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 139
Query: 361 RYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQG 419
++ G IA G+ YL+ + + +HRDL N ++ + KI DFGM + I+ D +
Sbjct: 140 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 420 NTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 197 GGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 38/202 (18%)
Query: 289 LGAGGFGEVYKGVL--PSGREI--AVKRLSKSSGQG-AEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG VY G L G++I AVK L++ + G +F E +++ H N++ LL
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 344 GFCLEDP---------EKQGQLDWSRRYK--------IIGL---IARGILYLHEDSRLRI 383
G CL K G L R + +IG +A+G+ YL + +
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 173
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAK------IFGVDQTQGNTSRIAGTYGYMAPEYAM 437
+HRDL N +LD + K++DFG+A+ + V G + +MA E
Sbjct: 174 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK----WMALESLQ 229
Query: 438 HGQFSVKSDVYSFGVLVLEIIT 459
+F+ KSDV+SFGVL+ E++T
Sbjct: 230 TQKFTTKSDVWSFGVLLWELMT 251
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 22/175 (12%)
Query: 304 SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR-----------------LLGFC 346
SGR++AVK + Q E NEVV++ QH N+V L G
Sbjct: 69 SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 347 LEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDF 406
L D Q +L+ + + + + + YLH +IHRD+K +ILL + K+SDF
Sbjct: 129 LTDIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDF 185
Query: 407 GMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
G D + + GT +MAPE ++ + D++S G++V+E++ G+
Sbjct: 186 GFCAQISKDVPKRKX--LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G +GEV V E +AVK + K + E K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH- 72
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 73 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 42/220 (19%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL-------PSGREIAVKRLSKSSGQGAE-EFKNEV 328
+VA K + +LG G FG VY+GV P R +A+K +++++ EF NE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 72
Query: 329 VVVAKLQHRNLVRLLGFC----------------------------LEDPEKQGQLDWSR 360
V+ + ++VRLLG +E+ S+
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 361 RYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQG 419
++ G IA G+ YL+ + + +HRDL N ++ + KI DFGM + I+ D +
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
Query: 420 NTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 190 GGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 129 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 181
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 42/220 (19%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL-------PSGREIAVKRLSKSSGQGAE-EFKNEV 328
+VA K + +LG G FG VY+GV P R +A+K +++++ EF NE
Sbjct: 12 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 70
Query: 329 VVVAKLQHRNLVRLLGFC----------------------------LEDPEKQGQLDWSR 360
V+ + ++VRLLG +E+ S+
Sbjct: 71 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 130
Query: 361 RYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQG 419
++ G IA G+ YL+ + + +HRDL N ++ + KI DFGM + I+ D +
Sbjct: 131 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 187
Query: 420 NTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 188 GGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 36/210 (17%)
Query: 278 VATNKFSTDNKLGAGGFGEVY--KGVLPSGREIAVKRLSK---SSGQGAEEFKNEVVVVA 332
+ ++++ LG G FGEV K + +G+E AVK +SK E EV ++
Sbjct: 47 IFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLK 105
Query: 333 KLQHRNLVRLLGFCLEDP-------------EKQGQLDWSRRY------KIIGLIARGIL 373
+L H N+++L F ED E ++ +R+ +II + GI
Sbjct: 106 QLDHPNIMKLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 164
Query: 374 YLHEDSRLRIIHRDLKVSNILLDA---EMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGY 430
Y+H++ +I+HRDLK N+LL++ + N +I DFG++ F + + GT Y
Sbjct: 165 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYY 218
Query: 431 MAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
+APE +HG + K DV+S GV++ +++G
Sbjct: 219 IAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 126 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMI 178
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 38/202 (18%)
Query: 289 LGAGGFGEVYKGVL--PSGREI--AVKRLSKSSGQG-AEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG VY G L G++I AVK L++ + G +F E +++ H N++ LL
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 344 GFCLEDP---------EKQGQLDWSRRYK--------IIGL---IARGILYLHEDSRLRI 383
G CL K G L R + +IG +A+G+ YL + +
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 149
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAK------IFGVDQTQGNTSRIAGTYGYMAPEYAM 437
+HRDL N +LD + K++DFG+A+ + V G + +MA E
Sbjct: 150 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK----WMALESLQ 205
Query: 438 HGQFSVKSDVYSFGVLVLEIIT 459
+F+ KSDV+SFGVL+ E++T
Sbjct: 206 TQKFTTKSDVWSFGVLLWELMT 227
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 38/202 (18%)
Query: 289 LGAGGFGEVYKGVL--PSGREI--AVKRLSKSSGQG-AEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG VY G L G++I AVK L++ + G +F E +++ H N++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 344 GFCLEDP---------EKQGQLDWSRRYK--------IIGL---IARGILYLHEDSRLRI 383
G CL K G L R + +IG +A+G+ YL + +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 152
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAK------IFGVDQTQGNTSRIAGTYGYMAPEYAM 437
+HRDL N +LD + K++DFG+A+ + V G + +MA E
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK----WMALESLQ 208
Query: 438 HGQFSVKSDVYSFGVLVLEIIT 459
+F+ KSDV+SFGVL+ E++T
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMT 230
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 42/220 (19%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL-------PSGREIAVKRLSKSSGQGAE-EFKNEV 328
+VA K + +LG G FG VY+GV P R +A+K +++++ EF NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 66
Query: 329 VVVAKLQHRNLVRLLGFC----------------------------LEDPEKQGQLDWSR 360
V+ + ++VRLLG +E+ S+
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 361 RYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQG 419
++ G IA G+ YL+ + + +HRDL N ++ + KI DFGM + I+ D +
Sbjct: 127 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 183
Query: 420 NTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 184 GGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 42/220 (19%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL-------PSGREIAVKRLSKSSGQGAE-EFKNEV 328
+VA K + +LG G FG VY+GV P R +A+K +++++ EF NE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 72
Query: 329 VVVAKLQHRNLVRLLGFC----------------------------LEDPEKQGQLDWSR 360
V+ + ++VRLLG +E+ S+
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 361 RYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQG 419
++ G IA G+ YL+ + + +HRDL N ++ + KI DFGM + I+ D +
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
Query: 420 NTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 190 GGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 130 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 182
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 38/202 (18%)
Query: 289 LGAGGFGEVYKGVL--PSGREI--AVKRLSKSSGQG-AEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG VY G L G++I AVK L++ + G +F E +++ H N++ LL
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 344 GFCLEDP---------EKQGQLDWSRRYK--------IIGL---IARGILYLHEDSRLRI 383
G CL K G L R + +IG +A+G+ YL + +
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 151
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAK------IFGVDQTQGNTSRIAGTYGYMAPEYAM 437
+HRDL N +LD + K++DFG+A+ + V G + +MA E
Sbjct: 152 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK----WMALESLQ 207
Query: 438 HGQFSVKSDVYSFGVLVLEIIT 459
+F+ KSDV+SFGVL+ E++T
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMT 229
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G +GEV V E +AVK + K + E K E+ + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH- 73
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 74 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 126
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 186
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 187 EPVDVWSCGIVLTAMLAGE 205
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 42/220 (19%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL-------PSGREIAVKRLSKSSGQGAE-EFKNEV 328
+VA K + +LG G FG VY+GV P R +A+K +++++ EF NE
Sbjct: 43 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 101
Query: 329 VVVAKLQHRNLVRLLGFC----------------------------LEDPEKQGQLDWSR 360
V+ + ++VRLLG +E+ S+
Sbjct: 102 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 161
Query: 361 RYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQG 419
++ G IA G+ YL+ + + +HRDL N ++ + KI DFGM + I+ D +
Sbjct: 162 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 218
Query: 420 NTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 219 GGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 42/220 (19%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL-------PSGREIAVKRLSKSSGQGAE-EFKNEV 328
+VA K + +LG G FG VY+GV P R +A+K +++++ EF NE
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 69
Query: 329 VVVAKLQHRNLVRLLG--------FCLEDPEKQGQL--------------------DWSR 360
V+ + ++VRLLG + + +G L S+
Sbjct: 70 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 129
Query: 361 RYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQG 419
++ G IA G+ YL+ + + +HRDL N ++ + KI DFGM + I+ D +
Sbjct: 130 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 186
Query: 420 NTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 187 GGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G +GEV V E +AVK + K + E K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 73 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 42/220 (19%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL-------PSGREIAVKRLSKSSGQGAE-EFKNEV 328
+VA K + +LG G FG VY+GV P R +A+K +++++ EF NE
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 79
Query: 329 VVVAKLQHRNLVRLLG--------FCLEDPEKQGQL--------------------DWSR 360
V+ + ++VRLLG + + +G L S+
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 139
Query: 361 RYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQG 419
++ G IA G+ YL+ + + +HRDL N ++ + KI DFGM + I+ D +
Sbjct: 140 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 420 NTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 197 GGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 87/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + GT Y+ PE
Sbjct: 126 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMI 178
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 87/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + GT Y+ PE
Sbjct: 129 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMI 181
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 89/190 (46%), Gaps = 32/190 (16%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLE 348
+G G FG+V G G ++AVK + + A+ F E V+ +L+H NLV+LLG +E
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 349 DPEKQGQLDWSRRYKIIG-----LIARGILYLHEDSRLRI----------------IHRD 387
+ +G L Y G L +RG L D L+ +HRD
Sbjct: 258 E---KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 314
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDV 447
L N+L+ + K+SDFG+ K Q G + APE +FS KSDV
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-----VKWTAPEALREKKFSTKSDV 369
Query: 448 YSFGVLVLEI 457
+SFG+L+ EI
Sbjct: 370 WSFGILLWEI 379
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 123 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 175
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 176 EGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 89/199 (44%), Gaps = 29/199 (14%)
Query: 287 NKLGAGGFGEVYKGVL--PSGR--EIAVKRLSK---SSGQGAEEFKNEVVVVAKLQHRNL 339
KLG G FG V +G PSG+ +AVK L S + ++F EV + L HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 340 VRLLGFCLEDPEKQ--------GQLDWSRRYK---IIGLIAR-------GILYLHEDSRL 381
+RL G L P K LD R+++ ++G ++R G+ YL
Sbjct: 74 IRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK--- 130
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGV-DQTQGNTSRIAGTYGYMAPEYAMHGQ 440
R IHRDL N+LL KI DFG+ + D + + APE
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT 190
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FS SD + FGV + E+ T
Sbjct: 191 FSHASDTWMFGVTLWEMFT 209
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 99/196 (50%), Gaps = 31/196 (15%)
Query: 289 LGAGGFGEVYK-GVLPSGREIAVKRLSKSSGQGAEE--FKNEVVVVAKLQHRNLVRLL-- 343
LG G FGEV K + +E AVK ++K+S + + EV ++ KL H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 344 ----------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRD 387
G ++ K+ + +II + GI Y+H+ + I+HRD
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRD 146
Query: 388 LKVSNILLDA---EMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVK 444
LK NILL++ + + KI DFG++ F Q RI GT Y+APE + G + K
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRI-GTAYYIAPE-VLRGTYDEK 202
Query: 445 SDVYSFGVLVLEIITG 460
DV+S GV++ +++G
Sbjct: 203 CDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 99/196 (50%), Gaps = 31/196 (15%)
Query: 289 LGAGGFGEVYK-GVLPSGREIAVKRLSKSSGQGAEE--FKNEVVVVAKLQHRNLVRLL-- 343
LG G FGEV K + +E AVK ++K+S + + EV ++ KL H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 344 ----------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRD 387
G ++ K+ + +II + GI Y+H+ + I+HRD
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRD 146
Query: 388 LKVSNILLDA---EMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVK 444
LK NILL++ + + KI DFG++ F Q RI GT Y+APE + G + K
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRI-GTAYYIAPE-VLRGTYDEK 202
Query: 445 SDVYSFGVLVLEIITG 460
DV+S GV++ +++G
Sbjct: 203 CDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 99/196 (50%), Gaps = 31/196 (15%)
Query: 289 LGAGGFGEVYK-GVLPSGREIAVKRLSKSSGQGAEE--FKNEVVVVAKLQHRNLVRLL-- 343
LG G FGEV K + +E AVK ++K+S + + EV ++ KL H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 344 ----------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRD 387
G ++ K+ + +II + GI Y+H+ + I+HRD
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRD 146
Query: 388 LKVSNILLDA---EMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVK 444
LK NILL++ + + KI DFG++ F Q RI GT Y+APE + G + K
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRI-GTAYYIAPE-VLRGTYDEK 202
Query: 445 SDVYSFGVLVLEIITG 460
DV+S GV++ +++G
Sbjct: 203 CDVWSAGVILYILLSG 218
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 89/199 (44%), Gaps = 29/199 (14%)
Query: 287 NKLGAGGFGEVYKGVL--PSGR--EIAVKRLSK---SSGQGAEEFKNEVVVVAKLQHRNL 339
KLG G FG V +G PSG+ +AVK L S + ++F EV + L HRNL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 340 VRLLGFCLEDPEKQ--------GQLDWSRRYK---IIGLIAR-------GILYLHEDSRL 381
+RL G L P K LD R+++ ++G ++R G+ YL
Sbjct: 78 IRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK--- 134
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGV-DQTQGNTSRIAGTYGYMAPEYAMHGQ 440
R IHRDL N+LL KI DFG+ + D + + APE
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 194
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FS SD + FGV + E+ T
Sbjct: 195 FSHASDTWMFGVTLWEMFT 213
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 95/198 (47%), Gaps = 33/198 (16%)
Query: 288 KLGAGGFGEVY---KGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
KLG+G +GEV V R I + R + S + EV V+ L H N+++L
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 345 FCLEDPE---------KQGQL--DWSRRYK--------IIGLIARGILYLHEDSRLRIIH 385
F ED K G+L + R K II + G+ YLH+ + I+H
Sbjct: 104 F-FEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN---IVH 159
Query: 386 RDLKVSNILLDAEMNP---KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFS 442
RDLK N+LL+++ KI DFG++ +F + Q GT Y+APE + ++
Sbjct: 160 RDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMKERLGTAYYIAPE-VLRKKYD 215
Query: 443 VKSDVYSFGVLVLEIITG 460
K DV+S GV++ ++ G
Sbjct: 216 EKCDVWSIGVILFILLAG 233
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 32/199 (16%)
Query: 289 LGAGGFGEVYKGVL--PSGREI--AVKRLSKSSGQG-AEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG VY G L G++I AVK L++ + G +F E +++ H N++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 344 GFCLEDP---------EKQGQLDWSRRYK--------IIGL---IARGILYLHEDSRLRI 383
G CL K G L R + +IG +A+G+ +L + +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 155
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT---YGYMAPEYAMHGQ 440
+HRDL N +LD + K++DFG+A+ +D+ + G +MA E +
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDM-LDKEFDSVHNKTGAKLPVKWMALESLQTQK 214
Query: 441 FSVKSDVYSFGVLVLEIIT 459
F+ KSDV+SFGVL+ E++T
Sbjct: 215 FTTKSDVWSFGVLLWELMT 233
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 89/199 (44%), Gaps = 29/199 (14%)
Query: 287 NKLGAGGFGEVYKGVL--PSGR--EIAVKRLSK---SSGQGAEEFKNEVVVVAKLQHRNL 339
KLG G FG V +G PSG+ +AVK L S + ++F EV + L HRNL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 340 VRLLGFCLEDPEKQ--------GQLDWSRRYK---IIGLIAR-------GILYLHEDSRL 381
+RL G L P K LD R+++ ++G ++R G+ YL
Sbjct: 84 IRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK--- 140
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGV-DQTQGNTSRIAGTYGYMAPEYAMHGQ 440
R IHRDL N+LL KI DFG+ + D + + APE
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT 200
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FS SD + FGV + E+ T
Sbjct: 201 FSHASDTWMFGVTLWEMFT 219
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 37/223 (16%)
Query: 270 QFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVV 329
+ D A++ F +G G +G+VYKG ++A ++ +G EE K E+
Sbjct: 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEIN 72
Query: 330 VVAKL-QHRNLVRLLG-FCLEDPEKQGQLDW---------------------SRRYKIIG 366
++ K HRN+ G F ++P W + + + I
Sbjct: 73 MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA 132
Query: 367 LIARGIL----YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTS 422
I R IL +LH+ ++IHRD+K N+LL K+ DFG++ +D+T G +
Sbjct: 133 YICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSA--QLDRTVGRRN 187
Query: 423 RIAGTYGYMAPEYAM-----HGQFSVKSDVYSFGVLVLEIITG 460
GT +MAPE + KSD++S G+ +E+ G
Sbjct: 188 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 87/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + V + GT Y+ PE
Sbjct: 129 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEMI 181
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI++FG + V + + GT Y+ PE
Sbjct: 128 SK---RVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEMI 180
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 100/198 (50%), Gaps = 23/198 (11%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLV 340
K++ K+G G G VY + + +G+E+A+++++ E NE++V+ + ++ N+V
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 341 RLL-----------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRI 383
L G L D + +D + + + + +LH + ++
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QV 138
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
IHR++K NILL + + K++DFG +Q++ +T + GT +MAPE +
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGP 196
Query: 444 KSDVYSFGVLVLEIITGK 461
K D++S G++ +E+I G+
Sbjct: 197 KVDIWSLGIMAIEMIEGE 214
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 89/199 (44%), Gaps = 29/199 (14%)
Query: 287 NKLGAGGFGEVYKGVL--PSGR--EIAVKRLSK---SSGQGAEEFKNEVVVVAKLQHRNL 339
KLG G FG V +G PSG+ +AVK L S + ++F EV + L HRNL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 340 VRLLGFCLEDPEKQ--------GQLDWSRRYK---IIGLIAR-------GILYLHEDSRL 381
+RL G L P K LD R+++ ++G ++R G+ YL
Sbjct: 78 IRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK--- 134
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGV-DQTQGNTSRIAGTYGYMAPEYAMHGQ 440
R IHRDL N+LL KI DFG+ + D + + APE
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 194
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FS SD + FGV + E+ T
Sbjct: 195 FSHASDTWMFGVTLWEMFT 213
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 89/199 (44%), Gaps = 29/199 (14%)
Query: 287 NKLGAGGFGEVYKGVL--PSGR--EIAVKRLSK---SSGQGAEEFKNEVVVVAKLQHRNL 339
KLG G FG V +G PSG+ +AVK L S + ++F EV + L HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 340 VRLLGFCLEDPEKQ--------GQLDWSRRYK---IIGLIAR-------GILYLHEDSRL 381
+RL G L P K LD R+++ ++G ++R G+ YL
Sbjct: 74 IRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK--- 130
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGV-DQTQGNTSRIAGTYGYMAPEYAMHGQ 440
R IHRDL N+LL KI DFG+ + D + + APE
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 190
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FS SD + FGV + E+ T
Sbjct: 191 FSHASDTWMFGVTLWEMFT 209
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 38/202 (18%)
Query: 289 LGAGGFGEVYKGVL--PSGREI--AVKRLSKSSGQG-AEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG VY G L G++I AVK L++ + G +F E +++ H N++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 344 GFCLEDP---------EKQGQLDWSRRYK--------IIGL---IARGILYLHEDSRLRI 383
G CL K G L R + +IG +A+G+ +L + +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 152
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG------YMAPEYAM 437
+HRDL N +LD + K++DFG+A+ D + G +MA E
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 438 HGQFSVKSDVYSFGVLVLEIIT 459
+F+ KSDV+SFGVL+ E++T
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMT 230
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI+DFG + + ++GT Y+ PE
Sbjct: 127 SK---RVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDYLPPEMI 179
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 38/202 (18%)
Query: 289 LGAGGFGEVYKGVL--PSGREI--AVKRLSKSSGQG-AEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG VY G L G++I AVK L++ + G +F E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 344 GFCLEDP---------EKQGQLDWSRRYK--------IIGL---IARGILYLHEDSRLRI 383
G CL K G L R + +IG +A+G+ +L + +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 154
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG------YMAPEYAM 437
+HRDL N +LD + K++DFG+A+ D + G +MA E
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 438 HGQFSVKSDVYSFGVLVLEIIT 459
+F+ KSDV+SFGVL+ E++T
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT 232
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 33/210 (15%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAEEFK-NEVVVVAKLQH 336
++++F KLG G + VYKG+ +G +A+K + S +G E+ ++ +L+H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 337 RNLVRL-----------LGFCLEDPEKQGQLDWSR------RYKIIGLIA-------RGI 372
N+VRL L F D + + +D SR R + L+ +G+
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMD-SRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 373 LYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMA 432
+ HE+ +I+HRDLK N+L++ K+ DFG+A+ FG+ ++ + T Y A
Sbjct: 122 AFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLWYRA 176
Query: 433 PEYAMHGQ-FSVKSDVYSFGVLVLEIITGK 461
P+ M + +S D++S G ++ E+ITGK
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 89/199 (44%), Gaps = 29/199 (14%)
Query: 287 NKLGAGGFGEVYKGVL--PSGR--EIAVKRLSK---SSGQGAEEFKNEVVVVAKLQHRNL 339
KLG G FG V +G PSG+ +AVK L S + ++F EV + L HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 340 VRLLGFCLEDPEKQ--------GQLDWSRRYK---IIGLIAR-------GILYLHEDSRL 381
+RL G L P K LD R+++ ++G ++R G+ YL
Sbjct: 74 IRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK--- 130
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGV-DQTQGNTSRIAGTYGYMAPEYAMHGQ 440
R IHRDL N+LL KI DFG+ + D + + APE
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 190
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FS SD + FGV + E+ T
Sbjct: 191 FSHASDTWMFGVTLWEMFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 89/199 (44%), Gaps = 29/199 (14%)
Query: 287 NKLGAGGFGEVYKGVL--PSGR--EIAVKRLSK---SSGQGAEEFKNEVVVVAKLQHRNL 339
KLG G FG V +G PSG+ +AVK L S + ++F EV + L HRNL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 340 VRLLGFCLEDPEKQ--------GQLDWSRRYK---IIGLIAR-------GILYLHEDSRL 381
+RL G L P K LD R+++ ++G ++R G+ YL
Sbjct: 84 IRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK--- 140
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGV-DQTQGNTSRIAGTYGYMAPEYAMHGQ 440
R IHRDL N+LL KI DFG+ + D + + APE
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 200
Query: 441 FSVKSDVYSFGVLVLEIIT 459
FS SD + FGV + E+ T
Sbjct: 201 FSHASDTWMFGVTLWEMFT 219
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + + I A+K L K+ + A + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
++IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 126 SK---KVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMI 178
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 103/237 (43%), Gaps = 28/237 (11%)
Query: 247 AKKKYNAVPEGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGR 306
A K +A P + D L+ + D ++ LG GGF + Y+ +
Sbjct: 9 AIAKPSAKPSAHVDPKSAPLKEIP-DVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTK 67
Query: 307 EI-AVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEKQGQLDWSRRY 362
E+ A K + KS E+ E+ + L + ++V GF +D L+ RR
Sbjct: 68 EVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRR 127
Query: 363 KIIGLIAR------------------GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKIS 404
++ L R G+ YLH + R+IHRDLK+ N+ L+ +M+ KI
Sbjct: 128 SLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIG 184
Query: 405 DFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
DFG+A D + + GT Y+APE S + D++S G ++ ++ GK
Sbjct: 185 DFGLATKIEFDGERKKX--LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 38/202 (18%)
Query: 289 LGAGGFGEVYKGVL--PSGREI--AVKRLSKSSGQG-AEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG VY G L G++I AVK L++ + G +F E +++ H N++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 344 GFCLEDP---------EKQGQLDWSRRYK--------IIGL---IARGILYLHEDSRLRI 383
G CL K G L R + +IG +A+G+ +L + +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 155
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG------YMAPEYAM 437
+HRDL N +LD + K++DFG+A+ D + G +MA E
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 438 HGQFSVKSDVYSFGVLVLEIIT 459
+F+ KSDV+SFGVL+ E++T
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMT 233
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 42/220 (19%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL-------PSGREIAVKRLSKSSGQGAE-EFKNEV 328
+VA K + +LG G FG VY+GV P R +A+K +++++ EF NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 66
Query: 329 VVVAKLQHRNLVRLLGFC----------------------------LEDPEKQGQLDWSR 360
V+ + ++VRLLG +E+ S+
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 361 RYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQG 419
++ G IA G+ YL+ + + +HRDL N + + KI DFGM + I+ D +
Sbjct: 127 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRK 183
Query: 420 NTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 184 GGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 103
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
FC +D EK G D + I + YLH IIH
Sbjct: 104 FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 160
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S
Sbjct: 161 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 220
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 221 DLWALGCIIYQLVAG 235
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 89/190 (46%), Gaps = 32/190 (16%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLE 348
+G G FG+V G G ++AVK + + A+ F E V+ +L+H NLV+LLG +E
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 349 DPEKQGQLDWSRRYKIIG-----LIARGILYLHEDSRLRI----------------IHRD 387
+ +G L Y G L +RG L D L+ +HRD
Sbjct: 71 E---KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 127
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDV 447
L N+L+ + K+SDFG+ K Q G + APE +FS KSDV
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-----VKWTAPEALREKKFSTKSDV 182
Query: 448 YSFGVLVLEI 457
+SFG+L+ EI
Sbjct: 183 WSFGILLWEI 192
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 36/210 (17%)
Query: 278 VATNKFSTDNKLGAGGFGEVY--KGVLPSGREIAVKRLSK---SSGQGAEEFKNEVVVVA 332
+ ++++ LG G FGEV K + +G+E AVK +SK E EV ++
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 333 KLQHRNLVRLLGFCLEDP-------------EKQGQLDWSRRY------KIIGLIARGIL 373
+L H N+ +L F ED E ++ +R+ +II + GI
Sbjct: 82 QLDHPNIXKLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 140
Query: 374 YLHEDSRLRIIHRDLKVSNILLDA---EMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGY 430
Y H++ +I+HRDLK N+LL++ + N +I DFG++ F + + GT Y
Sbjct: 141 YXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK---IGTAYY 194
Query: 431 MAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
+APE +HG + K DV+S GV++ +++G
Sbjct: 195 IAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVLPSGRE-IAVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
LG G GEV V E +AVK + K + E K E+ + L H N+V+ G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 347 LEDPEKQGQLDW------------SRRYKIIGL-----------IARGILYLHEDSRLRI 383
++G + + R IG+ + G++YLH + I
Sbjct: 73 ----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
HRD+K N+LLD N KISDFG+A +F + + +++ GT Y+APE +F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 444 KS-DVYSFGVLVLEIITGK 461
+ DV+S G+++ ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 38/202 (18%)
Query: 289 LGAGGFGEVYKGVL--PSGREI--AVKRLSKSSGQG-AEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG VY G L G++I AVK L++ + G +F E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 344 GFCLEDP---------EKQGQLDWSRRYK--------IIGL---IARGILYLHEDSRLRI 383
G CL K G L R + +IG +A+G+ +L + +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 154
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG------YMAPEYAM 437
+HRDL N +LD + K++DFG+A+ D + G +MA E
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 438 HGQFSVKSDVYSFGVLVLEIIT 459
+F+ KSDV+SFGVL+ E++T
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 38/202 (18%)
Query: 289 LGAGGFGEVYKGVL--PSGREI--AVKRLSKSSGQG-AEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG VY G L G++I AVK L++ + G +F E +++ H N++ LL
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 344 GFCLEDP---------EKQGQLDWSRRYK--------IIGL---IARGILYLHEDSRLRI 383
G CL K G L R + +IG +A+G+ +L + +
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 159
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG------YMAPEYAM 437
+HRDL N +LD + K++DFG+A+ D + G +MA E
Sbjct: 160 VHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 438 HGQFSVKSDVYSFGVLVLEIIT 459
+F+ KSDV+SFGVL+ E++T
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMT 237
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 103/237 (43%), Gaps = 28/237 (11%)
Query: 247 AKKKYNAVPEGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGR 306
A K +A P + D L+ + D ++ LG GGF + Y+ +
Sbjct: 9 AIAKPSAKPSAHVDPKSAPLKEIP-DVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTK 67
Query: 307 EI-AVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEKQGQLDWSRRY 362
E+ A K + KS E+ E+ + L + ++V GF +D L+ RR
Sbjct: 68 EVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRR 127
Query: 363 KIIGLIAR------------------GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKIS 404
++ L R G+ YLH + R+IHRDLK+ N+ L+ +M+ KI
Sbjct: 128 SLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIG 184
Query: 405 DFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
DFG+A D + + GT Y+APE S + D++S G ++ ++ GK
Sbjct: 185 DFGLATKIEFDGERKKD--LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 38/202 (18%)
Query: 289 LGAGGFGEVYKGVL--PSGREI--AVKRLSKSSGQG-AEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG VY G L G++I AVK L++ + G +F E +++ H N++ LL
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 344 GFCLEDP---------EKQGQLDWSRRYK--------IIGL---IARGILYLHEDSRLRI 383
G CL K G L R + +IG +A+G+ +L + +
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 213
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG------YMAPEYAM 437
+HRDL N +LD + K++DFG+A+ D + G +MA E
Sbjct: 214 VHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 438 HGQFSVKSDVYSFGVLVLEIIT 459
+F+ KSDV+SFGVL+ E++T
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMT 291
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 89/190 (46%), Gaps = 32/190 (16%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLE 348
+G G FG+V G G ++AVK + + A+ F E V+ +L+H NLV+LLG +E
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 349 DPEKQGQLDWSRRYKIIG-----LIARGILYLHEDSRLRI----------------IHRD 387
+ +G L Y G L +RG L D L+ +HRD
Sbjct: 86 E---KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 142
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDV 447
L N+L+ + K+SDFG+ K Q G + APE +FS KSDV
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-----VKWTAPEALREKKFSTKSDV 197
Query: 448 YSFGVLVLEI 457
+SFG+L+ EI
Sbjct: 198 WSFGILLWEI 207
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 88/190 (46%), Gaps = 32/190 (16%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLE 348
+G G FG+V G G ++AVK + + A+ F E V+ +L+H NLV+LLG +E
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 349 DPEKQGQLDWSRRYKIIG-----LIARGILYLHEDSRLRI----------------IHRD 387
+ +G L Y G L +RG L D L+ +HRD
Sbjct: 77 E---KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 133
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDV 447
L N+L+ + K+SDFG+ K Q G + APE FS KSDV
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-----VKWTAPEALREAAFSTKSDV 188
Query: 448 YSFGVLVLEI 457
+SFG+L+ EI
Sbjct: 189 WSFGILLWEI 198
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGA---EEFKNEVVVVAKL 334
A F LG G FG VY + I A+K L K+ + A + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 335 QHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
+H N++RL G+ + +K + D R I +A + Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
R+IHRD+K N+LL + KI++FG + V + + GT Y+ PE
Sbjct: 129 SK---RVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEMI 181
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
K D++S GVL E + GK
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 116/241 (48%), Gaps = 48/241 (19%)
Query: 256 EGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLS 314
EG+ ++DL L++D+E ++ LG G +G VY G L + IA+K +
Sbjct: 7 EGDCESDL-----LEYDYE-----YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIP 56
Query: 315 KSSGQGAEEFKNEVVVVAKLQHRNLVRLLG----------FCLEDP---------EKQGQ 355
+ + ++ E+ + L+H+N+V+ LG F + P K G
Sbjct: 57 ERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGP 116
Query: 356 LDWSRRYKIIGL----IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAK 410
L + + IG I G+ YLH++ +I+HRD+K N+L++ KISDFG +K
Sbjct: 117 LKDNEQ--TIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK 171
Query: 411 -IFGVDQTQGNTSRIAGTYGYMAPEYAMHGQ--FSVKSDVYSFGVLVLEIITGKKNSSFY 467
+ G++ T GT YMAPE G + +D++S G ++E+ TGK FY
Sbjct: 172 RLAGINPC---TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK--PPFY 226
Query: 468 Q 468
+
Sbjct: 227 E 227
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 24/202 (11%)
Query: 283 FSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLS-KSSGQGAEEFKNEVVVVAKLQHRNLV 340
F+ ++G G FGEV+KG+ +++ A+K + + + E+ + E+ V+++ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 341 RLLGFCLE-----------------DPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRI 383
+ G L+ D + G D + ++ I +G+ YLH + +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK--- 141
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
IHRD+K +N+LL + + K++DFG+A Q + NT GT +MAPE +
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIQQSAYDS 199
Query: 444 KSDVYSFGVLVLEIITGKKNSS 465
K+D++S G+ +E+ G+ +S
Sbjct: 200 KADIWSLGITAIELAKGEPPNS 221
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKGVLPSGREI-AVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG GGF + Y+ +E+ A K + KS E+ E+ + L + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 345 FCLEDPEKQGQLDWSRRYKIIGLIAR------------------GILYLHEDSRLRIIHR 386
F +D L+ RR ++ L R G+ YLH + R+IHR
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHR 150
Query: 387 DLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSD 446
DLK+ N+ L+ +M+ KI DFG+A D + + GT Y+APE S + D
Sbjct: 151 DLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD--LCGTPNYIAPEVLCKKGHSFEVD 208
Query: 447 VYSFGVLVLEIITGK 461
++S G ++ ++ GK
Sbjct: 209 IWSLGCILYTLLVGK 223
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 37/219 (16%)
Query: 268 SLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSG---QGAE 322
S + D +K+ + +GAG FGEV G LP REI V + SG +
Sbjct: 1 SKEIDISCVKI-------EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRR 53
Query: 323 EFKNEVVVVAKLQHRNLVRLLG--------FCLEDPEKQGQLDWSRR--------YKIIG 366
+F +E ++ + H N++ L G + + + G LD R +++G
Sbjct: 54 DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVG 113
Query: 367 L---IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGN-TS 422
+ IA G+ YL + + +HR L NIL+++ + K+SDFG+++ D + TS
Sbjct: 114 MLRGIAAGMKYLAD---MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTS 170
Query: 423 RIAGTYG--YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ G + APE + +F+ SDV+S+G+++ E+++
Sbjct: 171 ALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 31/195 (15%)
Query: 289 LGAGGFGEVY--KGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLL--- 343
LG+G F EV+ K L +G+ A+K + KS +NE+ V+ K++H N+V L
Sbjct: 17 LGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 344 ---------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDL 388
G + ++G +I + + YLHE+ I+HRDL
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENG---IVHRDL 132
Query: 389 KVSNIL-LDAEMNPKI--SDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
K N+L L E N KI +DFG++K+ + G S GT GY+APE +S
Sbjct: 133 KPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQKPYSKAV 188
Query: 446 DVYSFGVLVLEIITG 460
D +S GV+ ++ G
Sbjct: 189 DCWSIGVITYILLCG 203
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 46/214 (21%)
Query: 283 FSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS-SGQGAEEFKNEVVVVAKLQHRNLV 340
+ +LG GGFG V + + +G ++A+K+ + S + E + E+ ++ KL H N+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 341 RLLGFCLEDPEKQGQLDWS---------------RRY----------------KIIGLIA 369
E P+ +L + R+Y ++ I+
Sbjct: 77 S----AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 132
Query: 370 RGILYLHEDSRLRIIHRDLKVSNILLDA---EMNPKISDFGMAKIFGVDQTQGNTSRIAG 426
+ YLHE+ RIIHRDLK NI+L + KI D G AK +DQ + T G
Sbjct: 133 SALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTE-FVG 186
Query: 427 TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
T Y+APE +++V D +SFG L E ITG
Sbjct: 187 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 46/214 (21%)
Query: 283 FSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS-SGQGAEEFKNEVVVVAKLQHRNLV 340
+ +LG GGFG V + + +G ++A+K+ + S + E + E+ ++ KL H N+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 341 RLLGFCLEDPEKQGQLDWS---------------RRY----------------KIIGLIA 369
E P+ +L + R+Y ++ I+
Sbjct: 76 S----AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 131
Query: 370 RGILYLHEDSRLRIIHRDLKVSNILLDA---EMNPKISDFGMAKIFGVDQTQGNTSRIAG 426
+ YLHE+ RIIHRDLK NI+L + KI D G AK +DQ + T G
Sbjct: 132 SALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTE-FVG 185
Query: 427 TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
T Y+APE +++V D +SFG L E ITG
Sbjct: 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 39/206 (18%)
Query: 283 FSTDNKLGAGGFGEVYKGVLP----SGREIAVKRLSKSSGQGAEE-FKNEVVVVAKLQHR 337
F LG G F EV VL +G+ AVK + K + +G E +NE+ V+ K++H
Sbjct: 24 FEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHE 80
Query: 338 NLVRLLGFCLEDPE-------------------KQGQLDWSRRYKIIGLIARGILYLHED 378
N+V L E P ++G +I + + YLH
Sbjct: 81 NIVALEDI-YESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLH-- 137
Query: 379 SRLRIIHRDLKVSNILL---DAEMNPKISDFGMAKIFGVDQTQGNTSRIA-GTYGYMAPE 434
R+ I+HRDLK N+L D E ISDFG++K+ G +G+ A GT GY+APE
Sbjct: 138 -RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEG----KGDVMSTACGTPGYVAPE 192
Query: 435 YAMHGQFSVKSDVYSFGVLVLEIITG 460
+S D +S GV+ ++ G
Sbjct: 193 VLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 28/210 (13%)
Query: 275 AIKVATNKFSTDNKLGAGGFGEVYKG--VLPSGRE--IAVKRLSKS-SGQGAEEFKNEVV 329
A ++ + + + +GAG FGEV G LP RE +A+K L + + +F E
Sbjct: 16 AKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEAS 75
Query: 330 VVAKLQHRNLVRLLG--------FCLEDPEKQGQLDWSRR--------YKIIGL---IAR 370
++ + H N++ L G + + + G LD + +++G+ I+
Sbjct: 76 IMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISA 135
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT-YG 429
G+ YL S + +HRDL NIL+++ + K+SDFG++++ D T+R
Sbjct: 136 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 192
Query: 430 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ APE +F+ SDV+S+G+++ E+++
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 35/203 (17%)
Query: 283 FSTDNKLGAGGFGEVYKGVLPSGRE----IAVKRLSKSSGQGA---EEFKNEVVVVAKLQ 335
F LG G FG VY L R+ +A+K L K+ + A + + EV + + L+
Sbjct: 14 FDIGRPLGKGKFGNVY---LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 336 HRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLHE 377
H N++RL G+ + +K + D R I +A + Y H
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
R+IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 131 K---RVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIE 183
Query: 438 HGQFSVKSDVYSFGVLVLEIITG 460
K D++S GVL E + G
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
F +D EK G D + I + YLH IIH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 155
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S S
Sbjct: 156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSS 215
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 216 DLWALGCIIYQLVAG 230
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 106/245 (43%), Gaps = 49/245 (20%)
Query: 267 ESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLP----SGREIAVK--RLSKSSGQG 320
E LQ E + + N LG G FG V +G L + ++AVK +L SS +
Sbjct: 20 EELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQRE 79
Query: 321 AEEFKNEVVVVAKLQHRNLVRLLGFCLEDPE-------------KQGQLDWSRRY----- 362
EEF +E + H N++RLLG C+E K G L Y
Sbjct: 80 IEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLET 139
Query: 363 -----------KIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMA-K 410
K + IA G+ YL S +HRDL N +L +M ++DFG++ K
Sbjct: 140 GPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKK 196
Query: 411 IFGVD-QTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT-------GKK 462
I+ D QG +++ ++A E ++ KSDV++FGV + EI T G +
Sbjct: 197 IYSGDYYRQGRIAKMP--VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ 254
Query: 463 NSSFY 467
N Y
Sbjct: 255 NHEMY 259
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL--PSGREIAVKRLSKSSG---QGAEEFKNEVVVV 331
++ ++ + +G+G GEV G L P R++ V + +G + +F +E ++
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 332 AKLQHRNLVRL--------LGFCLEDPEKQGQLDWSRR--------YKIIGL---IARGI 372
+ H N++RL L + + + G LD R +++G+ + G+
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 373 LYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--Y 430
YL S L +HRDL N+L+D+ + K+SDFG++++ D T+ G +
Sbjct: 165 RYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT-TGGKIPIRW 220
Query: 431 MAPEYAMHGQFSVKSDVYSFGVLVLEII 458
APE FS SDV+SFGV++ E++
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 25/201 (12%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LG+G FG V G ++AVK + K +EF E + KL H LV+ G C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 347 ------------------LEDPEKQGQ-LDWSRRYKIIGLIARGILYLHEDSRLRIIHRD 387
L G+ L+ S+ ++ + G+ +L + IHRD
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRD 129
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDV 447
L N L+D ++ K+SDFGM + + +D ++ + APE + ++S KSDV
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTR-YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 448 YSFGVLVLEIIT-GKKNSSFY 467
++FG+L+ E+ + GK Y
Sbjct: 189 WAFGILMWEVFSLGKMPYDLY 209
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 87/203 (42%), Gaps = 35/203 (17%)
Query: 283 FSTDNKLGAGGFGEVYKGVLPSGRE----IAVKRLSKSSGQGA---EEFKNEVVVVAKLQ 335
F LG G FG VY L R+ +A+K L K+ + A + + EV + + L+
Sbjct: 14 FDIGRPLGKGKFGNVY---LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 336 HRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLHE 377
H N++RL G+ + +K + D R I +A + Y H
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
R+IHRD+K N+LL + KI+DFG + V + GT Y+ PE
Sbjct: 131 K---RVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEMIE 183
Query: 438 HGQFSVKSDVYSFGVLVLEIITG 460
K D++S GVL E + G
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL--PSGREIAVKRLSKSSG---QGAEEFKNEVVVV 331
++ ++ + +G+G GEV G L P R++ V + +G + +F +E ++
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 332 AKLQHRNLVRL--------LGFCLEDPEKQGQLDWSRR--------YKIIGL---IARGI 372
+ H N++RL L + + + G LD R +++G+ + G+
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 373 LYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--Y 430
YL S L +HRDL N+L+D+ + K+SDFG++++ D T+ G +
Sbjct: 165 RYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT-TGGKIPIRW 220
Query: 431 MAPEYAMHGQFSVKSDVYSFGVLVLEII 458
APE FS SDV+SFGV++ E++
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 23/205 (11%)
Query: 277 KVATNKFSTDNKLGAGGFGEVY---KGVLP-SGREIAVKRLSKSSGQGAEEF--KNEVVV 330
K + F LG G FG+V+ K P SG A+K L K++ + + K E +
Sbjct: 24 KADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI 83
Query: 331 VAKLQHRNLVRLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSR---------- 380
+A + H +V+L + + LD+ R + +++ +++ ED +
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGL 143
Query: 381 -----LRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
L II+RDLK NILLD E + K++DFG++K +D + S GT YMAPE
Sbjct: 144 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-AIDHEKKAYS-FCGTVEYMAPEV 201
Query: 436 AMHGQFSVKSDVYSFGVLVLEIITG 460
S +D +S+GVL+ E++TG
Sbjct: 202 VNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 38/208 (18%)
Query: 289 LGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLG--- 344
LG G +G VY G L + IA+K + + + ++ E+ + L+H+N+V+ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 345 -------FCLEDP---------EKQGQLDWSRRYKIIGL----IARGILYLHEDSRLRII 384
F + P K G L + + IG I G+ YLH++ +I+
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQ--TIGFYTKQILEGLKYLHDN---QIV 130
Query: 385 HRDLKVSNILLDAEMNP-KISDFGMAK-IFGVDQTQGNTSRIAGTYGYMAPEYAMHGQ-- 440
HRD+K N+L++ KISDFG +K + G++ T GT YMAPE G
Sbjct: 131 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC---TETFTGTLQYMAPEIIDKGPRG 187
Query: 441 FSVKSDVYSFGVLVLEIITGKKNSSFYQ 468
+ +D++S G ++E+ TGK FY+
Sbjct: 188 YGKAADIWSLGCTIIEMATGK--PPFYE 213
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSS----GQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG GGF + ++ +E+ ++ S E+ E+ + L H+++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 345 F---------CLEDPEKQGQLDWSRRYKIIG---------LIARGILYLHEDSRLRIIHR 386
F LE ++ L+ +R K + I G YLH R R+IHR
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHR 145
Query: 387 DLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSD 446
DLK+ N+ L+ ++ KI DFG+A D + T + GT Y+APE S + D
Sbjct: 146 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVD 203
Query: 447 VYSFGVLVLEIITGK 461
V+S G ++ ++ GK
Sbjct: 204 VWSIGCIMYTLLVGK 218
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 26/200 (13%)
Query: 282 KFSTDNKLGAGGFGEVYKGVLPSGREIAVK--RLSKSSGQGAEEFKNEVVVVAKLQHRNL 339
K+ K+G G +G VYK G A+K RL K E+ ++ +L+H N+
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 340 VRL---------LGFCLEDPEK---------QGQLDWSRRYKIIGLIARGILYLHEDSRL 381
V+L L E ++ +G L+ + + GI Y H+
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR--- 119
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM-HGQ 440
R++HRDLK N+L++ E KI+DFG+A+ FG+ + T I T Y AP+ M +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEIV-TLWYRAPDVLMGSKK 177
Query: 441 FSVKSDVYSFGVLVLEIITG 460
+S D++S G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAE---EFKNEVVVVAKLQ 335
++++ LG GG EV+ L R++AVK L + F+ E A L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 336 HRNLVRLL---------------------GFCLED-PEKQGQLDWSRRYKIIGLIARGIL 373
H +V + G L D +G + R ++I + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQGNTSRIAGTYGYMA 432
+ H++ IIHRD+K +NIL+ A K+ DFG+A+ I + T+ + GT Y++
Sbjct: 131 FSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLS 187
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIITGKK 462
PE A +SDVYS G ++ E++TG+
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 34/197 (17%)
Query: 289 LGAGGFGEVY--KGVLPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
+G G F +V + +L +GRE+A+K + K+ + ++ EV ++ L H N+V+L
Sbjct: 20 IGKGNFAKVKLARHIL-TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL-- 76
Query: 345 FCLEDPEK--------------------QGQLDWSRRYKIIGLIARGILYLHEDSRLRII 384
F + + EK G++ I + Y H+ RI+
Sbjct: 77 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIV 133
Query: 385 HRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFS-V 443
HRDLK N+LLDA+MN KI+DFG + F V G G+ Y APE ++
Sbjct: 134 HRDLKAENLLLDADMNIKIADFGFSNEFTVG---GKLDTFCGSPPYAAPELFQGKKYDGP 190
Query: 444 KSDVYSFGVLVLEIITG 460
+ DV+S GV++ +++G
Sbjct: 191 EVDVWSLGVILYTLVSG 207
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSS----GQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG GGF + ++ +E+ ++ S E+ E+ + L H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 345 F---------CLEDPEKQGQLDWSRRYKIIG---------LIARGILYLHEDSRLRIIHR 386
F LE ++ L+ +R K + I G YLH R R+IHR
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHR 141
Query: 387 DLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSD 446
DLK+ N+ L+ ++ KI DFG+A D + T + GT Y+APE S + D
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVD 199
Query: 447 VYSFGVLVLEIITGK 461
V+S G ++ ++ GK
Sbjct: 200 VWSIGCIMYTLLVGK 214
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSS----GQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG GGF + ++ +E+ ++ S E+ E+ + L H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 345 F---------CLEDPEKQGQLDWSRRYKIIG---------LIARGILYLHEDSRLRIIHR 386
F LE ++ L+ +R K + I G YLH R R+IHR
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHR 141
Query: 387 DLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSD 446
DLK+ N+ L+ ++ KI DFG+A D + T + GT Y+APE S + D
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVD 199
Query: 447 VYSFGVLVLEIITGK 461
V+S G ++ ++ GK
Sbjct: 200 VWSIGCIMYTLLVGK 214
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 34/197 (17%)
Query: 289 LGAGGFGEVY--KGVLPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
+G G F +V + +L +GRE+A+K + K+ + ++ EV ++ L H N+V+L
Sbjct: 23 IGKGNFAKVKLARHIL-TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL-- 79
Query: 345 FCLEDPEK--------------------QGQLDWSRRYKIIGLIARGILYLHEDSRLRII 384
F + + EK G++ I + Y H+ RI+
Sbjct: 80 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIV 136
Query: 385 HRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFS-V 443
HRDLK N+LLDA+MN KI+DFG + F V G G Y APE ++
Sbjct: 137 HRDLKAENLLLDADMNIKIADFGFSNEFTVG---GKLDAFCGAPPYAAPELFQGKKYDGP 193
Query: 444 KSDVYSFGVLVLEIITG 460
+ DV+S GV++ +++G
Sbjct: 194 EVDVWSLGVILYTLVSG 210
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 26/200 (13%)
Query: 282 KFSTDNKLGAGGFGEVYKGVLPSGREIAVK--RLSKSSGQGAEEFKNEVVVVAKLQHRNL 339
K+ K+G G +G VYK G A+K RL K E+ ++ +L+H N+
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 340 VRL---------LGFCLEDPEK---------QGQLDWSRRYKIIGLIARGILYLHEDSRL 381
V+L L E ++ +G L+ + + GI Y H+
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR--- 119
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM-HGQ 440
R++HRDLK N+L++ E KI+DFG+A+ FG+ + T + T Y AP+ M +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEVV-TLWYRAPDVLMGSKK 177
Query: 441 FSVKSDVYSFGVLVLEIITG 460
+S D++S G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 26/200 (13%)
Query: 282 KFSTDNKLGAGGFGEVYKGVLPSGREIAVK--RLSKSSGQGAEEFKNEVVVVAKLQHRNL 339
K+ K+G G +G VYK G A+K RL K E+ ++ +L+H N+
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 340 VRL---------LGFCLEDPEK---------QGQLDWSRRYKIIGLIARGILYLHEDSRL 381
V+L L E ++ +G L+ + + GI Y H+
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR--- 119
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM-HGQ 440
R++HRDLK N+L++ E KI+DFG+A+ FG+ + T + T Y AP+ M +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEVV-TLWYRAPDVLMGSKK 177
Query: 441 FSVKSDVYSFGVLVLEIITG 460
+S D++S G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 35/212 (16%)
Query: 283 FSTDNKLGAGGFGEVYKGV-LPSGREIAVKRL---SKSSGQGAEEFKNEVVVVAKLQHRN 338
F + K+G G F EVY+ L G +A+K++ + + E+ ++ +L H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 339 LVRLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRL----------------- 381
+++ +ED E L+ + G ++R I + + RL
Sbjct: 94 VIKYYASFIEDNELNIVLELAD----AGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 382 ------RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
R++HRD+K +N+ + A K+ D G+ + F T ++ + GT YM+PE
Sbjct: 150 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPER 207
Query: 436 AMHGQFSVKSDVYSFGVLVLEIITGKKNSSFY 467
++ KSD++S G L+ E+ S FY
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEM--AALQSPFY 237
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 42/208 (20%)
Query: 288 KLGAGGFGEVYKGVLPSGR-EIAVKRLSKSS-------------GQGAEEFKNEVVVVAK 333
KLG+G +GEV +G E A+K + KS + EE NE+ ++
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 334 LQHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYL 375
L H N+++L G E + + D I+ I GI YL
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYL 162
Query: 376 HEDSRLRIIHRDLKVSNILLDAE---MNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMA 432
H+ + I+HRD+K NILL+ + +N KI DFG++ F D + GT Y+A
Sbjct: 163 HKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR---LGTAYYIA 216
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIITG 460
PE + +++ K DV+S GV++ ++ G
Sbjct: 217 PE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 40/208 (19%)
Query: 281 NKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLV 340
+ + +G G FG V K +++A+K++ S + A F E+ ++++ H N+V
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESERKA--FIVELRQLSRVNHPNIV 65
Query: 341 RLLGFCLE---------------------DP----EKQGQLDWSRRYKIIGLIARGILYL 375
+L G CL +P + W + ++G+ YL
Sbjct: 66 KLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ------CSQGVAYL 119
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPE 434
H +IHRDLK N+LL A KI DFG A Q + + G+ +MAPE
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPE 174
Query: 435 YAMHGQFSVKSDVYSFGVLVLEIITGKK 462
+S K DV+S+G+++ E+IT +K
Sbjct: 175 VFEGSNYSEKCDVFSWGIILWEVITRRK 202
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 76
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
F +D EK G D + I + YLH IIH
Sbjct: 77 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 133
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S
Sbjct: 134 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 193
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 194 DLWALGCIIYQLVAG 208
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 36/215 (16%)
Query: 278 VATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRLSKSSGQGAEEFKN--EVVVVAKL 334
+AT+++ ++G G +G VYK P SG +A+K + +G+ EV ++ +L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 335 Q---HRNLVRLLGFCLE---DPEKQGQLDWSR----------RYKIIGLIA--------- 369
+ H N+VRL+ C D E + L + + GL A
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 370 --RGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
RG+ +LH + I+HRDLK NIL+ + K++DFG+A+I+ Q + + T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALAPVVVT 174
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKK 462
Y APE + ++ D++S G + E+ K
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 40/208 (19%)
Query: 281 NKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLV 340
+ + +G G FG V K +++A+K++ S + A F E+ ++++ H N+V
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESERKA--FIVELRQLSRVNHPNIV 64
Query: 341 RLLGFCLE---------------------DP----EKQGQLDWSRRYKIIGLIARGILYL 375
+L G CL +P + W + ++G+ YL
Sbjct: 65 KLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ------CSQGVAYL 118
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPE 434
H +IHRDLK N+LL A KI DFG A Q + + G+ +MAPE
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPE 173
Query: 435 YAMHGQFSVKSDVYSFGVLVLEIITGKK 462
+S K DV+S+G+++ E+IT +K
Sbjct: 174 VFEGSNYSEKCDVFSWGIILWEVITRRK 201
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 75
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
F +D EK G D + I + YLH IIH
Sbjct: 76 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 132
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S
Sbjct: 133 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 192
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 193 DLWALGCIIYQLVAG 207
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAE---EFKNEVVVVAKLQ 335
++++ LG GG EV+ L R++AVK L + F+ E A L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 336 HRNLVRLL---------------------GFCLED-PEKQGQLDWSRRYKIIGLIARGIL 373
H +V + G L D +G + R ++I + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQGNTSRIAGTYGYMA 432
+ H++ IIHRD+K +NI++ A K+ DFG+A+ I + T+ + GT Y++
Sbjct: 131 FSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIITGKK 462
PE A +SDVYS G ++ E++TG+
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 73
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
F +D EK G D + I + YLH IIH
Sbjct: 74 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 130
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S
Sbjct: 131 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 190
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 191 DLWALGCIIYQLVAG 205
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAE---EFKNEVVVVAKLQ 335
++++ LG GG EV+ L R++AVK L + F+ E A L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 336 HRNLVRLL---------------------GFCLED-PEKQGQLDWSRRYKIIGLIARGIL 373
H +V + G L D +G + R ++I + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQGNTSRIAGTYGYMA 432
+ H++ IIHRD+K +NI++ A K+ DFG+A+ I + T+ + GT Y++
Sbjct: 131 FSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIITGKK 462
PE A +SDVYS G ++ E++TG+
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
F +D EK G D + I + YLH IIH
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 153
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S
Sbjct: 154 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 213
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 214 DLWALGCIIYQLVAG 228
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 74
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
F +D EK G D + I + YLH IIH
Sbjct: 75 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 131
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S
Sbjct: 132 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 191
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 192 DLWALGCIIYQLVAG 206
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
F +D EK G D + I + YLH IIH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 155
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S
Sbjct: 156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 215
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 216 DLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
F +D EK G D + I + YLH IIH
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 153
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S
Sbjct: 154 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 213
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 214 DLWALGCIIYQLVAG 228
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 95
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
F +D EK G D + I + YLH IIH
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 152
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S
Sbjct: 153 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS 212
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 213 DLWALGCIIYQLVAG 227
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 95
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
F +D EK G D + I + YLH IIH
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 152
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S
Sbjct: 153 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 212
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 213 DLWALGCIIYQLVAG 227
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 99
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
F +D EK G D + I + YLH IIH
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 156
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S
Sbjct: 157 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 216
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 217 DLWALGCIIYQLVAG 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
F +D EK G D + I + YLH IIH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 155
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S
Sbjct: 156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 215
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 216 DLWALGCIIYQLVAG 230
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 99
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
F +D EK G D + I + YLH IIH
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 156
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S
Sbjct: 157 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS 216
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 217 DLWALGCIIYQLVAG 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
F +D EK G D + I + YLH IIH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 155
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S
Sbjct: 156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 215
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 216 DLWALGCIIYQLVAG 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGE-VYKGVLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
F +D EK G D + I + YLH IIH
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 153
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S
Sbjct: 154 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 213
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 214 DLWALGCIIYQLVAG 228
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 49/208 (23%)
Query: 289 LGAGGFGEVYKGVLP-SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFCL 347
+G+GGFG+V+K G+ +KR+ K + + AE EV +AKL H N+V G C
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRV-KYNNEKAE---REVKALAKLDHVNIVHYNG-CW 73
Query: 348 E----DPE---------------------KQGQLD-WSRRY------KIIGL-----IAR 370
+ DPE +G L+ W + K++ L I +
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITK 133
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGY 430
G+ Y+H ++I+RDLK SNI L KI DFG+ D G R GT Y
Sbjct: 134 GVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKRXRSKGTLRY 187
Query: 431 MAPEYAMHGQFSVKSDVYSFGVLVLEII 458
M+PE + + D+Y+ G+++ E++
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
F +D EK G D + I + YLH IIH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 155
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S
Sbjct: 156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSS 215
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 216 DLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 101
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
F +D EK G D + I + YLH IIH
Sbjct: 102 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 158
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S
Sbjct: 159 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 218
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 219 DLWALGCIIYQLVAG 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 80
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
F +D EK G D + I + YLH IIH
Sbjct: 81 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 137
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S
Sbjct: 138 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 197
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 198 DLWALGCIIYQLVAG 212
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 28/194 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LG G FG V G ++A+K + + S +EF E V+ L H LV+L G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 347 LED-------------------PEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRD 387
+ E + + + ++ + + YL + +HRD
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 145
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKS 445
L N L++ + K+SDFG+++ D+ TS + + + PE M+ +FS KS
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDE---ETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 446 DVYSFGVLVLEIIT 459
D+++FGVL+ EI +
Sbjct: 203 DIWAFGVLMWEIYS 216
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 36/215 (16%)
Query: 278 VATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRLSKSSGQGAEEFKN--EVVVVAKL 334
+AT+++ ++G G +G VYK P SG +A+K + +G+ EV ++ +L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 335 Q---HRNLVRLLGFCLE---DPEKQGQLDWSR----------RYKIIGLIA--------- 369
+ H N+VRL+ C D E + L + + GL A
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 370 --RGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
RG+ +LH + I+HRDLK NIL+ + K++DFG+A+I+ Q + T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALDPVVVT 174
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKK 462
Y APE + ++ D++S G + E+ K
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
F +D EK G D + I + YLH IIH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 155
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S
Sbjct: 156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 215
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 216 DLWALGCIIYQLVAG 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG G F V L + RE A+K L K E V+++L H V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96
Query: 345 FCLEDPEKQ-------------------GQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
F +D EK G D + I + YLH IIH
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 153
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RDLK NILL+ +M+ +I+DFG AK+ + Q + GT Y++PE S
Sbjct: 154 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSS 213
Query: 446 DVYSFGVLVLEIITG 460
D+++ G ++ +++ G
Sbjct: 214 DLWALGCIIYQLVAG 228
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 91/199 (45%), Gaps = 33/199 (16%)
Query: 289 LGAGGFGEVYKGVLP-----SGREIAVKRLSKSSG-QGAEEFKNEVVVVAKLQHRNLVRL 342
LG G FG+V +G +AVK L G Q +K E+ ++ L H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 343 LGFCLEDPEKQGQL-----------DWSRRYKIIGL---------IARGILYLHEDSRLR 382
G C + EK QL D+ R+ I GL I G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSI-GLAQLLLFAQQICEGMAYLHSQ---H 137
Query: 383 IIHRDLKVSNILLDAEMNPKISDFGMAKIF--GVDQTQGNTSRIAGTYGYMAPEYAMHGQ 440
IHR+L N+LLD + KI DFG+AK G + + + + Y APE +
Sbjct: 138 YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYK 196
Query: 441 FSVKSDVYSFGVLVLEIIT 459
F SDV+SFGV + E++T
Sbjct: 197 FYYASDVWSFGVTLYELLT 215
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 104/256 (40%), Gaps = 43/256 (16%)
Query: 244 RRKAKKKYNA---VPEGNADNDLTTLESLQFDF-EAIKVATNKFSTDNKLGAGGFGEVYK 299
+ K K KY + E N T ++ Q + E + N LGAG FG+V +
Sbjct: 5 KYKQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVE 64
Query: 300 G-VLPSGRE-----IAVKRL-SKSSGQGAEEFKNEVVVVAKL-QHRNLVRLLGFCLE--- 348
G+E +AVK L S + E +E+ +++ L QH N+V LLG C
Sbjct: 65 ATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124
Query: 349 -------------------------DPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRI 383
D E L+ +A+G+ +L +
Sbjct: 125 VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---C 181
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
IHRD+ N+LL KI DFG+A+ D +MAPE ++V
Sbjct: 182 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV 241
Query: 444 KSDVYSFGVLVLEIIT 459
+SDV+S+G+L+ EI +
Sbjct: 242 QSDVWSYGILLWEIFS 257
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 21/190 (11%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKS-----SGQGAEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG+V++G+ S A+ K+ S E+F E + + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 344 GFCLEDPE-------KQGQLDWSRRYKIIGL-IARGILYLHEDSRL-------RIIHRDL 388
G E+P G+L + + L +A ILY ++ S R +HRD+
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDI 137
Query: 389 KVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVY 448
N+L+ A K+ DFG+++ + D T S+ +MAPE +F+ SDV+
Sbjct: 138 AARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 196
Query: 449 SFGVLVLEII 458
FGV + EI+
Sbjct: 197 MFGVCMWEIL 206
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 27/199 (13%)
Query: 283 FSTDNKLGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR 341
F KLG G +G VYK + +G+ +A+K++ S +E E+ ++ + ++V+
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVK 88
Query: 342 LLGFCLEDPE-------------------KQGQLDWSRRYKIIGLIARGILYLHEDSRLR 382
G ++ + + L I+ +G+ YLH +R
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMR 145
Query: 383 IIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFS 442
IHRD+K NILL+ E + K++DFG+A + N + GT +MAPE ++
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX--VIGTPFWMAPEVIQEIGYN 203
Query: 443 VKSDVYSFGVLVLEIITGK 461
+D++S G+ +E+ GK
Sbjct: 204 CVADIWSLGITAIEMAEGK 222
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 22/175 (12%)
Query: 304 SGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR-----------------LLGFC 346
+G+++AVK++ Q E NEVV++ H N+V L G
Sbjct: 69 TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGA 128
Query: 347 LEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDF 406
L D +++ + + + R + YLH +IHRD+K +ILL ++ K+SDF
Sbjct: 129 LTDIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDF 185
Query: 407 GMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
G V + + GT +MAPE + + D++S G++V+E+I G+
Sbjct: 186 GFCA--QVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 238
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 21/190 (11%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKS-----SGQGAEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG+V++G+ S A+ K+ S E+F E + + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 344 GFCLEDPE-------KQGQLDWSRRYKIIGL-IARGILYLHEDSRL-------RIIHRDL 388
G E+P G+L + + L +A ILY ++ S R +HRD+
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDI 137
Query: 389 KVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVY 448
N+L+ + K+ DFG+++ + D T S+ +MAPE +F+ SDV+
Sbjct: 138 AARNVLVSSNDCVKLGDFGLSR-YMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVW 196
Query: 449 SFGVLVLEII 458
FGV + EI+
Sbjct: 197 MFGVCMWEIL 206
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 37/214 (17%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSGQGAEEFKN--EVVVVAKL 334
A ++ ++G G +G+V+K + GR +A+KR+ +G+ EV V+ L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 335 Q---HRNLVRLLGFC-LEDPEKQGQLDWSRRY-----------------------KIIGL 367
+ H N+VRL C + +++ +L + ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
+ RG+ +LH R++HRDLK NIL+ + K++DFG+A+I+ Q + + T
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVT 182
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
Y APE + ++ D++S G + E+ K
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 91/199 (45%), Gaps = 33/199 (16%)
Query: 289 LGAGGFGEVYKGVLP-----SGREIAVKRLSKSSG-QGAEEFKNEVVVVAKLQHRNLVRL 342
LG G FG+V +G +AVK L G Q +K E+ ++ L H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 343 LGFCLEDPEKQGQL-----------DWSRRYKIIGL---------IARGILYLHEDSRLR 382
G C + EK QL D+ R+ I GL I G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSI-GLAQLLLFAQQICEGMAYLHAQ---H 137
Query: 383 IIHRDLKVSNILLDAEMNPKISDFGMAKIF--GVDQTQGNTSRIAGTYGYMAPEYAMHGQ 440
IHR+L N+LLD + KI DFG+AK G + + + + Y APE +
Sbjct: 138 YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYK 196
Query: 441 FSVKSDVYSFGVLVLEIIT 459
F SDV+SFGV + E++T
Sbjct: 197 FYYASDVWSFGVTLYELLT 215
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSS----GQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG GGF + ++ +E+ ++ S E+ E+ + L H+++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 345 F---------CLEDPEKQGQLDWSRRYKIIG---------LIARGILYLHEDSRLRIIHR 386
F LE ++ L+ +R K + I G YLH R R+IHR
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHR 163
Query: 387 DLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSD 446
DLK+ N+ L+ ++ KI DFG+A D + + GT Y+APE S + D
Sbjct: 164 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKGHSFEVD 221
Query: 447 VYSFGVLVLEIITGK 461
V+S G ++ ++ GK
Sbjct: 222 VWSIGCIMYTLLVGK 236
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAE---EFKNEVVVVAKLQ 335
++++ LG GG EV+ L R++AVK L + F+ E A L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 336 HRNLVRLL---------------------GFCLED-PEKQGQLDWSRRYKIIGLIARGIL 373
H +V + G L D +G + R ++I + +
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQGNTSRIAGTYGYMA 432
+ H++ IIHRD+K +NI++ A K+ DFG+A+ I + T+ + GT Y++
Sbjct: 131 FSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIITGKK 462
PE A +SDVYS G ++ E++TG+
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAE---EFKNEVVVVAKLQ 335
++++ LG GG EV+ L R++AVK L + F+ E A L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 336 HRNLVRLL---------------------GFCLED-PEKQGQLDWSRRYKIIGLIARGIL 373
H +V + G L D +G + R ++I + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQGNTSRIAGTYGYMA 432
+ H++ IIHRD+K +NI++ A K+ DFG+A+ I + T+ + GT Y++
Sbjct: 131 FSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIITGKK 462
PE A +SDVYS G ++ E++TG+
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 55/223 (24%)
Query: 281 NKFSTDNKLGAGGFGEVYKGVLPSG---REIAVKRLSK-SSGQGAEEFKNEVVVVAKL-Q 335
N + +G G FG+V K + + A+KR+ + +S +F E+ V+ KL
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 336 HRNLVRLLGFC---------LEDPEKQGQLDWSRRYKII--------------------- 365
H N++ LLG C +E LD+ R+ +++
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 366 ----GLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT 421
+ARG+ YL S+ + IHRDL NIL+ KI+DFG+++ G
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR--------GQE 183
Query: 422 SRIAGTYG-----YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ T G +MA E + ++ SDV+S+GVL+ EI++
Sbjct: 184 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 28/194 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LG G FG V G ++A+K + K +EF E V+ L H LV+L G C
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 347 LED-------------------PEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRD 387
+ E + + + ++ + + YL + +HRD
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 129
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKS 445
L N L++ + K+SDFG+++ D+ TS + + + PE M+ +FS KS
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSRYVLDDEY---TSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 446 DVYSFGVLVLEIIT 459
D+++FGVL+ EI +
Sbjct: 187 DIWAFGVLMWEIYS 200
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSS----GQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG GGF + ++ +E+ ++ S E+ E+ + L H+++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 345 F---------CLEDPEKQGQLDWSRRYKIIG---------LIARGILYLHEDSRLRIIHR 386
F LE ++ L+ +R K + I G YLH R R+IHR
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHR 165
Query: 387 DLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSD 446
DLK+ N+ L+ ++ KI DFG+A D + + GT Y+APE S + D
Sbjct: 166 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKGHSFEVD 223
Query: 447 VYSFGVLVLEIITGK 461
V+S G ++ ++ GK
Sbjct: 224 VWSIGCIMYTLLVGK 238
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 28/194 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LG G FG V G ++A+K + K +EF E V+ L H LV+L G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 347 LED-------------------PEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRD 387
+ E + + + ++ + + YL + +HRD
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 130
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKS 445
L N L++ + K+SDFG+++ D+ TS + + + PE M+ +FS KS
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEY---TSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 446 DVYSFGVLVLEIIT 459
D+++FGVL+ EI +
Sbjct: 188 DIWAFGVLMWEIYS 201
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 37/214 (17%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSGQGAEEFKN--EVVVVAKL 334
A ++ ++G G +G+V+K + GR +A+KR+ +G+ EV V+ L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 335 Q---HRNLVRLLGFC-LEDPEKQGQLDWSRRY-----------------------KIIGL 367
+ H N+VRL C + +++ +L + ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
+ RG+ +LH R++HRDLK NIL+ + K++DFG+A+I+ Q + + T
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVT 182
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
Y APE + ++ D++S G + E+ K
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 28/194 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LG G FG V G ++A+K + + S +EF E V+ L H LV+L G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 347 LED-------------------PEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRD 387
+ E + + + ++ + + YL + +HRD
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 145
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKS 445
L N L++ + K+SDFG+++ D+ TS + + + PE M+ +FS KS
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEY---TSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 446 DVYSFGVLVLEIIT 459
D+++FGVL+ EI +
Sbjct: 203 DIWAFGVLMWEIYS 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 28/192 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LG G FG V G ++A+K + K +EF E V+ L H LV+L G C
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 347 LED-------------------PEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRD 387
+ E + + + ++ + + YL + +HRD
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 125
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKS 445
L N L++ + K+SDFG+++ D+ TS + + + PE M+ +FS KS
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYVLDDEY---TSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 446 DVYSFGVLVLEI 457
D+++FGVL+ EI
Sbjct: 183 DIWAFGVLMWEI 194
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 28/196 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGRE-IAVKRLSKSSGQGAE-EFKNEVVVVAKLQHRNLVRLLG 344
++G G FGEV+ G L + +AVK ++ + +F E ++ + H N+VRL+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 345 FCLEDPE-------------------KQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
C + + +L +++G A G+ YL IH
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIH 236
Query: 386 RDLKVSNILLDAEMNPKISDFGMAK--IFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
RDL N L+ + KISDFGM++ GV G ++ + APE +G++S
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVP--VKWTAPEALNYGRYSS 294
Query: 444 KSDVYSFGVLVLEIIT 459
+SDV+SFG+L+ E +
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 27/195 (13%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSS----GQGAEEFKNEVVVVAKLQHRNLVRLLG 344
LG GGF + ++ +E+ ++ S E+ E+ + L H+++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 345 F---------CLEDPEKQGQLDWSRRYKIIG---------LIARGILYLHEDSRLRIIHR 386
F LE ++ L+ +R K + I G YLH R R+IHR
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHR 139
Query: 387 DLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSD 446
DLK+ N+ L+ ++ KI DFG+A D + + GT Y+APE S + D
Sbjct: 140 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKGHSFEVD 197
Query: 447 VYSFGVLVLEIITGK 461
V+S G ++ ++ GK
Sbjct: 198 VWSIGCIMYTLLVGK 212
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 98/220 (44%), Gaps = 34/220 (15%)
Query: 276 IKVATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGAEEFK----NEVVV 330
IK+ F LG G FG+V+ + A+K L K ++ + + V+
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 72
Query: 331 VAKLQHRNLVRL---------LGFCLE---------DPEKQGQLDWSRRYKIIGLIARGI 372
+H L + L F +E + + D SR I G+
Sbjct: 73 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGL 132
Query: 373 LYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK--IFGVDQTQGNTSRIAGTYGY 430
+LH I++RDLK+ NILLD + + KI+DFGM K + G T+ GT Y
Sbjct: 133 QFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG----DAKTNEFCGTPDY 185
Query: 431 MAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 470
+APE + +++ D +SFGVL+ E++ G+ S F+ D
Sbjct: 186 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQD 223
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 55/223 (24%)
Query: 281 NKFSTDNKLGAGGFGEVYKGVLPSG---REIAVKRLSK-SSGQGAEEFKNEVVVVAKL-Q 335
N + +G G FG+V K + + A+KR+ + +S +F E+ V+ KL
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 336 HRNLVRLLGFC---------LEDPEKQGQLDWSRRYKII--------------------- 365
H N++ LLG C +E LD+ R+ +++
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 366 ----GLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT 421
+ARG+ YL S+ + IHRDL NIL+ KI+DFG+++ G
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR--------GQE 193
Query: 422 SRIAGTYG-----YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ T G +MA E + ++ SDV+S+GVL+ EI++
Sbjct: 194 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 28/194 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LG G FG V G ++A+K + + S +EF E V+ L H LV+L G C
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 347 LED-------------------PEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRD 387
+ E + + + ++ + + YL + +HRD
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 136
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFSVKS 445
L N L++ + K+SDFG+++ D+ TS + + + PE M+ +FS KS
Sbjct: 137 LAARNCLVNDQGVVKVSDFGLSRYVLDDEY---TSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 446 DVYSFGVLVLEIIT 459
D+++FGVL+ EI +
Sbjct: 194 DIWAFGVLMWEIYS 207
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 36/215 (16%)
Query: 278 VATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRLSKSSGQGAEEFKN--EVVVVAKL 334
+AT+++ ++G G +G VYK P SG +A+K + +G+ EV ++ +L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 335 Q---HRNLVRLLGFCLE---DPEKQGQLDWSR----------RYKIIGLIA--------- 369
+ H N+VRL+ C D E + L + + GL A
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 370 --RGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
RG+ +LH + I+HRDLK NIL+ + K++DFG+A+I+ Q + T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALFPVVVT 174
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKK 462
Y APE + ++ D++S G + E+ K
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 37/214 (17%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSGQGAEEFKN--EVVVVAKL 334
A ++ ++G G +G+V+K + GR +A+KR+ +G+ EV V+ L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 335 Q---HRNLVRLLGFC-LEDPEKQGQLDWSRRY-----------------------KIIGL 367
+ H N+VRL C + +++ +L + ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
+ RG+ +LH R++HRDLK NIL+ + K++DFG+A+I+ Q + + T
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVT 182
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
Y APE + ++ D++S G + E+ K
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 54/207 (26%)
Query: 288 KLGAGGFGEVYKGVLPSGREIAV----KRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLL 343
+LG G FG+VYK +E +V K + S + E++ E+ ++A H N+V+LL
Sbjct: 44 ELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 344 G-------------FC-----------LEDPEKQGQLDWSRRYKIIGLIARGIL----YL 375
FC LE P + Q I ++ + L YL
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQ---------IQVVCKQTLDALNYL 151
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
H++ +IIHRDLK NIL + + K++DFG++ +T GT +MAPE
Sbjct: 152 HDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRTIQRRDSFIGTPYWMAPEV 206
Query: 436 AM-----HGQFSVKSDVYSFGVLVLEI 457
M + K+DV+S G+ ++E+
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAE---EFKNEVVVVAKLQ 335
++++ LG GG EV+ L R++AVK L + F+ E A L
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 336 HRNLVRLL---------------------GFCLED-PEKQGQLDWSRRYKIIGLIARGIL 373
H +V + G L D +G + R ++I + +
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 147
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQGNTSRIAGTYGYMA 432
+ H++ IIHRD+K +NI++ A K+ DFG+A+ I + T+ + GT Y++
Sbjct: 148 FSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 204
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIITGKK 462
PE A +SDVYS G ++ E++TG+
Sbjct: 205 PEQARGDSVDARSDVYSLGCVLYEVLTGEP 234
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 21/190 (11%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKS-----SGQGAEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG+V++G+ S A+ K+ S E+F E + + + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 344 GFCLEDPE-------KQGQLDWSRRYKIIGL-IARGILYLHEDSRL-------RIIHRDL 388
G E+P G+L + + L +A ILY ++ S R +HRD+
Sbjct: 458 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDI 517
Query: 389 KVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVY 448
N+L+ A K+ DFG+++ + D T S+ +MAPE +F+ SDV+
Sbjct: 518 AARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 576
Query: 449 SFGVLVLEII 458
FGV + EI+
Sbjct: 577 MFGVCMWEIL 586
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 94/220 (42%), Gaps = 60/220 (27%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLE 348
+G+GGFG+V+K + V R K + + AE EV +AKL H N+V G C +
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE---REVKALAKLDHVNIVHYNG-CWD 75
Query: 349 ------------------DPE--------------------KQGQLD-WSRRY------K 363
DPE +G L+ W + K
Sbjct: 76 GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 135
Query: 364 IIGL-----IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ 418
++ L I +G+ Y+H ++IHRDLK SNI L KI DFG+ D
Sbjct: 136 VLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND--- 189
Query: 419 GNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEII 458
G +R GT YM+PE + + D+Y+ G+++ E++
Sbjct: 190 GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 26/193 (13%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LG G FG V G ++A+K + K +EF E V+ L H LV+L G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 347 LED-------------------PEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRD 387
+ E + + + ++ + + YL + +HRD
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 130
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQ-TQGNTSRIAGTYGYMAPEYAMHGQFSVKSD 446
L N L++ + K+SDFG+++ D+ T S+ + PE M+ +FS KSD
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWS--PPEVLMYSKFSSKSD 188
Query: 447 VYSFGVLVLEIIT 459
+++FGVL+ EI +
Sbjct: 189 IWAFGVLMWEIYS 201
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 23/205 (11%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLPSGRE----IAVKRLSKSSGQGAEEF--KNEVVV 330
K ++F LG G FG+V+ SG + A+K L K++ + + K E +
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 331 VAKLQHRNLVRLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSR---------- 380
+ ++ H +V+L + + LD+ R + +++ +++ ED +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 381 -----LRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
L II+RDLK NILLD E + K++DFG++K +D + S GT YMAPE
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYS-FCGTVEYMAPEV 197
Query: 436 AMHGQFSVKSDVYSFGVLVLEIITG 460
+ +D +SFGVL+ E++TG
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 37/202 (18%)
Query: 292 GGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGF------ 345
G FG V+K L + +AVK Q + + EV + ++H N+++ +G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRGTS 92
Query: 346 ---------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLHED-------SRLRI 383
L D K + W+ I +ARG+ YLHED + I
Sbjct: 93 VDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAI 152
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFS- 442
HRD+K N+LL + I+DFG+A F ++ G+T GT YMAPE + G +
Sbjct: 153 SHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VLEGAINF 211
Query: 443 -----VKSDVYSFGVLVLEIIT 459
++ D+Y+ G+++ E+ +
Sbjct: 212 QRDAFLRIDMYAMGLVLWELAS 233
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ T + +G+G +G V + SG +IAVK+LS+ S A+ E+ ++ ++H N
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 111
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 112 VIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 171
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 172 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 223
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ +++ D++S G ++ E++TG+
Sbjct: 224 LNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 25/192 (13%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKS-----SGQGAEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG+V++G+ S A+ K+ S E+F E + + + H ++V+L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 344 GFCLEDPE-------KQGQLD---WSRRYKIIGLIARGILYLHEDSRL-------RIIHR 386
G E+P G+L R+Y + +A ILY ++ S R +HR
Sbjct: 106 GVITENPVWIIMELCTLGELRSFLQVRKYSLD--LASLILYAYQLSTALAYLESKRFVHR 163
Query: 387 DLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSD 446
D+ N+L+ + K+ DFG+++ + D T S+ +MAPE +F+ SD
Sbjct: 164 DIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 222
Query: 447 VYSFGVLVLEII 458
V+ FGV + EI+
Sbjct: 223 VWMFGVCMWEIL 234
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 102/252 (40%), Gaps = 43/252 (17%)
Query: 248 KKKYNA---VPEGNADNDLTTLESLQFDF-EAIKVATNKFSTDNKLGAGGFGEVYKG-VL 302
K KY + E N T ++ Q + E + N LGAG FG+V +
Sbjct: 1 KPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAF 60
Query: 303 PSGRE-----IAVKRL-SKSSGQGAEEFKNEVVVVAKL-QHRNLVRLLGFCLE------- 348
G+E +AVK L S + E +E+ +++ L QH N+V LLG C
Sbjct: 61 GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVI 120
Query: 349 ---------------------DPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRD 387
D E L+ +A+G+ +L + IHRD
Sbjct: 121 TEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRD 177
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDV 447
+ N+LL KI DFG+A+ D +MAPE ++V+SDV
Sbjct: 178 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 237
Query: 448 YSFGVLVLEIIT 459
+S+G+L+ EI +
Sbjct: 238 WSYGILLWEIFS 249
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 54/207 (26%)
Query: 288 KLGAGGFGEVYKGVLPSGREIAV----KRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLL 343
+LG G FG+VYK +E +V K + S + E++ E+ ++A H N+V+LL
Sbjct: 44 ELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 344 G-------------FC-----------LEDPEKQGQLDWSRRYKIIGLIARGIL----YL 375
FC LE P + Q I ++ + L YL
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQ---------IQVVCKQTLDALNYL 151
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
H++ +IIHRDLK NIL + + K++DFG++ Q S I GT +MAPE
Sbjct: 152 HDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRXIQRRDSFI-GTPYWMAPEV 206
Query: 436 AM-----HGQFSVKSDVYSFGVLVLEI 457
M + K+DV+S G+ ++E+
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 30/197 (15%)
Query: 289 LGAGGFGEVYKG--VLPSGREIAVKRLSKSSG---QGAEEFKNEVVVVAKLQHRNLVRLL 343
+GAG FGEV G LP R++AV + G + +F E ++ + H N+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 344 GFCLEDPE--------KQGQLD-WSRRY-------KIIGL---IARGILYLHEDSRLRII 384
G + G LD + R++ +++G+ IA G+ YL + + +
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL---ADMGYV 167
Query: 385 HRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG--YMAPEYAMHGQFS 442
HRDL NIL+++ + K+SDFG++++ D + + G + APE + +F+
Sbjct: 168 HRDLAARNILVNSNLVCKVSDFGLSRVIE-DDPEAVYTTTGGKIPVRWTAPEAIQYRKFT 226
Query: 443 VKSDVYSFGVLVLEIIT 459
SDV+S+G+++ E+++
Sbjct: 227 SASDVWSYGIVMWEVMS 243
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 27/193 (13%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKS-----SGQGAEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG+V++G+ S A+ K+ S E+F E + + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 344 GFCLEDP-----------EKQGQLDWSRRYKIIGLIARGILYLHEDSRL-------RIIH 385
G E+P E + L R+Y + +A ILY ++ S R +H
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQ-VRKYSLD--LASLILYAYQLSTALAYLESKRFVH 134
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RD+ N+L+ + K+ DFG+++ + D T S+ +MAPE +F+ S
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 446 DVYSFGVLVLEII 458
DV+ FGV + EI+
Sbjct: 194 DVWMFGVCMWEIL 206
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 27/193 (13%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKS-----SGQGAEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG+V++G+ S A+ K+ S E+F E + + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 344 GFCLEDP-----------EKQGQLDWSRRYKIIGLIARGILYLHEDSRL-------RIIH 385
G E+P E + L R+Y + +A ILY ++ S R +H
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQ-VRKYSLD--LASLILYAYQLSTALAYLESKRFVH 134
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RD+ N+L+ + K+ DFG+++ + D T S+ +MAPE +F+ S
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 446 DVYSFGVLVLEII 458
DV+ FGV + EI+
Sbjct: 194 DVWMFGVCMWEIL 206
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 34/201 (16%)
Query: 286 DNKLGAGGFGEVYKGV--LPSGREIAVKRLSKSSGQGA---EEFKNEVVVVAKLQHRNLV 340
D +LG+G FG V KG + + ++ K+ +E E V+ +L + +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 341 RLLGFC--------LEDPEK---QGQLDWSRRYK------IIGLIARGILYLHEDSRLRI 383
R++G C +E E L +R K ++ ++ G+ YL E +
Sbjct: 92 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---F 148
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG-----YMAPEYAMH 438
+HRDL N+LL + KISDFG++K D+ A T+G + APE +
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----AQTHGKWPVKWYAPECINY 204
Query: 439 GQFSVKSDVYSFGVLVLEIIT 459
+FS KSDV+SFGVL+ E +
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 34/201 (16%)
Query: 286 DNKLGAGGFGEVYKGV--LPSGREIAVKRLSKSSGQGA---EEFKNEVVVVAKLQHRNLV 340
D +LG+G FG V KG + + ++ K+ +E E V+ +L + +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 341 RLLGFC--------LEDPEK---QGQLDWSRRYK------IIGLIARGILYLHEDSRLRI 383
R++G C +E E L +R K ++ ++ G+ YL E +
Sbjct: 92 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---F 148
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG-----YMAPEYAMH 438
+HRDL N+LL + KISDFG++K D+ A T+G + APE +
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----AQTHGKWPVKWYAPECINY 204
Query: 439 GQFSVKSDVYSFGVLVLEIIT 459
+FS KSDV+SFGVL+ E +
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFS 225
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 34/201 (16%)
Query: 286 DNKLGAGGFGEVYKGV--LPSGREIAVKRLSKSSGQGA---EEFKNEVVVVAKLQHRNLV 340
D +LG+G FG V KG + + ++ K+ +E E V+ +L + +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 341 RLLGFC--------LEDPEK---QGQLDWSRRYK------IIGLIARGILYLHEDSRLRI 383
R++G C +E E L +R K ++ ++ G+ YL E +
Sbjct: 76 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---F 132
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG-----YMAPEYAMH 438
+HRDL N+LL + KISDFG++K D+ A T+G + APE +
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK----AQTHGKWPVKWYAPECINY 188
Query: 439 GQFSVKSDVYSFGVLVLEIIT 459
+FS KSDV+SFGVL+ E +
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFS 209
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 108/262 (41%), Gaps = 49/262 (18%)
Query: 244 RRKAKKKYNA---VPEGNADNDLTTLESLQFDF-EAIKVATNKFSTDNKLGAGGFGEVYK 299
+ K K KY + E N T ++ Q + E + N LGAG FG+V +
Sbjct: 5 KYKQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVE 64
Query: 300 G-VLPSGRE-----IAVKRL-SKSSGQGAEEFKNEVVVVAKL-QHRNLVRLLGFCLEDPE 351
G+E +AVK L S + E +E+ +++ L QH N+V LLG C
Sbjct: 65 ATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124
Query: 352 ---------KQGQLDWSRRYKIIGL-------------------------IARGILYLHE 377
L++ RR + GL +A+G+ +L
Sbjct: 125 VLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLAS 184
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
+ IHRD+ N+LL KI DFG+A+ D +MAPE
Sbjct: 185 KN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF 241
Query: 438 HGQFSVKSDVYSFGVLVLEIIT 459
++V+SDV+S+G+L+ EI +
Sbjct: 242 DCVYTVQSDVWSYGILLWEIFS 263
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 34/201 (16%)
Query: 286 DNKLGAGGFGEVYKGV--LPSGREIAVKRLSKSSGQGA---EEFKNEVVVVAKLQHRNLV 340
D +LG+G FG V KG + + ++ K+ +E E V+ +L + +V
Sbjct: 12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 341 RLLGFC--------LEDPEK---QGQLDWSRRYK------IIGLIARGILYLHEDSRLRI 383
R++G C +E E L +R K ++ ++ G+ YL E +
Sbjct: 72 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---F 128
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG-----YMAPEYAMH 438
+HRDL N+LL + KISDFG++K D+ A T+G + APE +
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----AQTHGKWPVKWYAPECINY 184
Query: 439 GQFSVKSDVYSFGVLVLEIIT 459
+FS KSDV+SFGVL+ E +
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFS 205
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 27/193 (13%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKS-----SGQGAEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG+V++G+ S A+ K+ S E+F E + + + H ++V+L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 344 GFCLEDP-----------EKQGQLDWSRRYKIIGLIARGILYLHEDSRL-------RIIH 385
G E+P E + L R+Y + +A ILY ++ S R +H
Sbjct: 80 GVITENPVWIIMELCTLGELRSFLQ-VRKYSLD--LASLILYAYQLSTALAYLESKRFVH 136
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RD+ N+L+ + K+ DFG+++ + D T S+ +MAPE +F+ S
Sbjct: 137 RDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 195
Query: 446 DVYSFGVLVLEII 458
DV+ FGV + EI+
Sbjct: 196 DVWMFGVCMWEIL 208
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 105/210 (50%), Gaps = 40/210 (19%)
Query: 280 TNKFSTDNKLGAGGFGEVY--KGVLPSGREIAVKRLSKSS-----GQGAEEFKNEVVVVA 332
++++ KLG+G +GEV K L +G E A+K + KSS GA +EV V+
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGA--LLDEVAVLK 76
Query: 333 KLQHRNLVRLLGFCLEDPE---------KQGQL--DWSRRYK--------IIGLIARGIL 373
+L H N+++L F ED + G+L + R K I+ + G
Sbjct: 77 QLDHPNIMKLYEF-FEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTT 135
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNP---KISDFGMAKIFGVDQTQGNTSRIAGTYGY 430
YLH+ + I+HRDLK N+LL+++ KI DFG++ F V G GT Y
Sbjct: 136 YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG---GKMKERLGTAYY 189
Query: 431 MAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
+APE + ++ K DV+S GV++ ++ G
Sbjct: 190 IAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 27/193 (13%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKS-----SGQGAEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG+V++G+ S A+ K+ S E+F E + + + H ++V+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 344 GFCLEDP-----------EKQGQLDWSRRYKIIGLIARGILYLHEDSRL-------RIIH 385
G E+P E + L R+Y + +A ILY ++ S R +H
Sbjct: 75 GVITENPVWIIMELCTLGELRSFLQ-VRKYSLD--LASLILYAYQLSTALAYLESKRFVH 131
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RD+ N+L+ + K+ DFG+++ + D T S+ +MAPE +F+ S
Sbjct: 132 RDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 190
Query: 446 DVYSFGVLVLEII 458
DV+ FGV + EI+
Sbjct: 191 DVWMFGVCMWEIL 203
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 28/196 (14%)
Query: 287 NKLGAGGFGEVYKGVLPSGRE-IAVKRLSKSSGQGAE-EFKNEVVVVAKLQHRNLVRLLG 344
++G G FGEV+ G L + +AVK ++ + +F E ++ + H N+VRL+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 345 FCLEDPE-------------------KQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
C + + +L +++G A G+ YL IH
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIH 236
Query: 386 RDLKVSNILLDAEMNPKISDFGMAK--IFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
RDL N L+ + KISDFGM++ GV G ++ + APE +G++S
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVP--VKWTAPEALNYGRYSS 294
Query: 444 KSDVYSFGVLVLEIIT 459
+SDV+SFG+L+ E +
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 66/213 (30%)
Query: 288 KLGAGGFGEVYKGVLPSGREIAV----KRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLL 343
+LG G FG+VYK +E +V K + S + E++ E+ ++A H N+V+LL
Sbjct: 44 ELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 344 G-------------FC-----------LEDPEKQGQLDWSRRYKIIGLIARGIL----YL 375
FC LE P + Q I ++ + L YL
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQ---------IQVVCKQTLDALNYL 151
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRI------AGTYG 429
H++ +IIHRDLK NIL + + K++DFG+ + NT I GT
Sbjct: 152 HDN---KIIHRDLKAGNILFTLDGDIKLADFGV--------SAKNTRXIQRRDXFIGTPY 200
Query: 430 YMAPEYAM-----HGQFSVKSDVYSFGVLVLEI 457
+MAPE M + K+DV+S G+ ++E+
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 33/209 (15%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRLSKSSGQGAE---EFKNEVVVVA 332
+V + + LG G FG+V G +G ++AVK L++ + + + + E+ +
Sbjct: 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK 71
Query: 333 KLQHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILY 374
+H ++++L G + K G+LD ++ I G+ Y
Sbjct: 72 LFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDY 131
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIA-GTYGYMAP 433
H R ++HRDLK N+LLDA MN KI+DFG++ + + G R + G+ Y AP
Sbjct: 132 CH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM----SDGEFLRXSCGSPNYAAP 184
Query: 434 EYAMHGQFSV--KSDVYSFGVLVLEIITG 460
E + G+ + D++S GV++ ++ G
Sbjct: 185 E-VISGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 105/210 (50%), Gaps = 40/210 (19%)
Query: 280 TNKFSTDNKLGAGGFGEVY--KGVLPSGREIAVKRLSKSS-----GQGAEEFKNEVVVVA 332
++++ KLG+G +GEV K L +G E A+K + KSS GA +EV V+
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGA--LLDEVAVLK 59
Query: 333 KLQHRNLVRLLGFCLEDPE---------KQGQL--DWSRRYK--------IIGLIARGIL 373
+L H N+++L F ED + G+L + R K I+ + G
Sbjct: 60 QLDHPNIMKLYEF-FEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTT 118
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNP---KISDFGMAKIFGVDQTQGNTSRIAGTYGY 430
YLH+ + I+HRDLK N+LL+++ KI DFG++ F V G GT Y
Sbjct: 119 YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG---GKMKERLGTAYY 172
Query: 431 MAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
+APE + ++ K DV+S GV++ ++ G
Sbjct: 173 IAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 27/193 (13%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKS-----SGQGAEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG+V++G+ S A+ K+ S E+F E + + + H ++V+L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 344 GFCLEDP-----------EKQGQLDWSRRYKIIGLIARGILYLHEDSRL-------RIIH 385
G E+P E + L R+Y + +A ILY ++ S R +H
Sbjct: 83 GVITENPVWIIMELCTLGELRSFLQ-VRKYSLD--LASLILYAYQLSTALAYLESKRFVH 139
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RD+ N+L+ + K+ DFG+++ + D T S+ +MAPE +F+ S
Sbjct: 140 RDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 198
Query: 446 DVYSFGVLVLEII 458
DV+ FGV + EI+
Sbjct: 199 DVWMFGVCMWEIL 211
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 23/205 (11%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLPSGRE----IAVKRLSKSSGQGAEEF--KNEVVV 330
K ++F LG G FG+V+ SG + A+K L K++ + + K E +
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 331 VAKLQHRNLVRLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSR---------- 380
+ ++ H +V+L + + LD+ R + +++ +++ ED +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 381 -----LRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
L II+RDLK NILLD E + K++DFG++K +D + S GT YMAPE
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYS-FCGTVEYMAPEV 197
Query: 436 AMHGQFSVKSDVYSFGVLVLEIITG 460
+ +D +SFGVL+ E++TG
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 288 KLGAGGFGEV-YKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR----- 341
K+G G G V V SG+ +AVK++ Q E NEVV++ QH N+V
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 342 ------------LLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLK 389
L G L D +++ + + + + + LH +IHRD+K
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIK 152
Query: 390 VSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYS 449
+ILL + K+SDFG V + + GT +MAPE + + D++S
Sbjct: 153 SDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 210
Query: 450 FGVLVLEIITGK 461
G++V+E++ G+
Sbjct: 211 LGIMVIEMVDGE 222
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 288 KLGAGGFGEV-YKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR----- 341
K+G G G V V SG+ +AVK++ Q E NEVV++ QH N+V
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 342 ------------LLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLK 389
L G L D +++ + + + + + LH +IHRD+K
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIK 154
Query: 390 VSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYS 449
+ILL + K+SDFG V + + GT +MAPE + + D++S
Sbjct: 155 SDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 212
Query: 450 FGVLVLEIITGK 461
G++V+E++ G+
Sbjct: 213 LGIMVIEMVDGE 224
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 27/193 (13%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKS-----SGQGAEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG+V++G+ S A+ K+ S E+F E + + + H ++V+L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 344 GFCLEDP-----------EKQGQLDWSRRYKIIGLIARGILYLHEDSRL-------RIIH 385
G E+P E + L R+Y + +A ILY ++ S R +H
Sbjct: 81 GVITENPVWIIMELCTLGELRSFLQ-VRKYSLD--LASLILYAYQLSTALAYLESKRFVH 137
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
RD+ N+L+ + K+ DFG+++ + D T S+ +MAPE +F+ S
Sbjct: 138 RDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 196
Query: 446 DVYSFGVLVLEII 458
DV+ FGV + EI+
Sbjct: 197 DVWMFGVCMWEIL 209
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 34/201 (16%)
Query: 286 DNKLGAGGFGEVYKGV--LPSGREIAVKRLSKSSGQGA---EEFKNEVVVVAKLQHRNLV 340
D +LG+G FG V KG + + ++ K+ +E E V+ +L + +V
Sbjct: 10 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 341 RLLGFC--------LEDPEK---QGQLDWSRRYK------IIGLIARGILYLHEDSRLRI 383
R++G C +E E L +R K ++ ++ G+ YL E +
Sbjct: 70 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---F 126
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG-----YMAPEYAMH 438
+HRDL N+LL + KISDFG++K D+ A T+G + APE +
Sbjct: 127 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----AQTHGKWPVKWYAPECINY 182
Query: 439 GQFSVKSDVYSFGVLVLEIIT 459
+FS KSDV+SFGVL+ E +
Sbjct: 183 YKFSSKSDVWSFGVLMWEAFS 203
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 23/205 (11%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLPSGRE----IAVKRLSKSSGQGAEEF--KNEVVV 330
K ++F LG G FG+V+ SG + A+K L K++ + + K E +
Sbjct: 21 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 80
Query: 331 VAKLQHRNLVRLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSR---------- 380
+ ++ H +V+L + + LD+ R + +++ +++ ED +
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 140
Query: 381 -----LRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
L II+RDLK NILLD E + K++DFG++K +D + S GT YMAPE
Sbjct: 141 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYS-FCGTVEYMAPEV 198
Query: 436 AMHGQFSVKSDVYSFGVLVLEIITG 460
+ +D +SFGVL+ E++TG
Sbjct: 199 VNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 34/201 (16%)
Query: 286 DNKLGAGGFGEVYKGV--LPSGREIAVKRLSKSSGQGA---EEFKNEVVVVAKLQHRNLV 340
D +LG+G FG V KG + + ++ K+ +E E V+ +L + +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 341 RLLGFC--------LEDPEK---QGQLDWSRRYK------IIGLIARGILYLHEDSRLRI 383
R++G C +E E L +R K ++ ++ G+ YL E +
Sbjct: 76 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---F 132
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG-----YMAPEYAMH 438
+HRDL N+LL + KISDFG++K D+ A T+G + APE +
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----AQTHGKWPVKWYAPECINY 188
Query: 439 GQFSVKSDVYSFGVLVLEIIT 459
+FS KSDV+SFGVL+ E +
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFS 209
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 288 KLGAGGFGEV-YKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR----- 341
K+G G G V V SG+ +AVK++ Q E NEVV++ QH N+V
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 342 ------------LLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLK 389
L G L D +++ + + + + + LH +IHRD+K
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIK 143
Query: 390 VSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYS 449
+ILL + K+SDFG V + + GT +MAPE + + D++S
Sbjct: 144 SDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 201
Query: 450 FGVLVLEIITGK 461
G++V+E++ G+
Sbjct: 202 LGIMVIEMVDGE 213
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 34/201 (16%)
Query: 286 DNKLGAGGFGEVYKGV--LPSGREIAVKRLSKSSGQGA---EEFKNEVVVVAKLQHRNLV 340
D +LG+G FG V KG + + ++ K+ +E E V+ +L + +V
Sbjct: 30 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 341 RLLGFC--------LEDPEK---QGQLDWSRRYK------IIGLIARGILYLHEDSRLRI 383
R++G C +E E L +R K ++ ++ G+ YL E +
Sbjct: 90 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---F 146
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG-----YMAPEYAMH 438
+HRDL N+LL + KISDFG++K D+ A T+G + APE +
Sbjct: 147 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----AQTHGKWPVKWYAPECINY 202
Query: 439 GQFSVKSDVYSFGVLVLEIIT 459
+FS KSDV+SFGVL+ E +
Sbjct: 203 YKFSSKSDVWSFGVLMWEAFS 223
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 33/199 (16%)
Query: 289 LGAGGFGEVYKGVLP-----SGREIAVKRLSKSSG-QGAEEFKNEVVVVAKLQHRNLVRL 342
LG G FG+V +G +AVK L + G Q ++ E+ ++ L H ++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 343 LGFCLEDPEKQGQL-----------DWSRRYKIIGL---------IARGILYLHEDSRLR 382
G C + EK QL D+ R+ +GL I G+ YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVGLAQLLLFAQQICEGMAYLHAQ---H 132
Query: 383 IIHRDLKVSNILLDAEMNPKISDFGMAKIF--GVDQTQGNTSRIAGTYGYMAPEYAMHGQ 440
IHR L N+LLD + KI DFG+AK G + + + + Y APE +
Sbjct: 133 YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECK 191
Query: 441 FSVKSDVYSFGVLVLEIIT 459
F SDV+SFGV + E++T
Sbjct: 192 FYYASDVWSFGVTLYELLT 210
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 21/190 (11%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKS-----SGQGAEEFKNEVVVVAKLQHRNLVRLL 343
+G G FG+V++G+ S A+ K+ S E+F E + + + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 344 GFCLEDPE-------KQGQLDWSRRYKIIGL-IARGILYLHEDSRL-------RIIHRDL 388
G E+P G+L + + L +A ILY ++ S R +HRD+
Sbjct: 458 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDI 517
Query: 389 KVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVY 448
N+L+ + K+ DFG+++ + D T S+ +MAPE +F+ SDV+
Sbjct: 518 AARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 576
Query: 449 SFGVLVLEII 458
FGV + EI+
Sbjct: 577 MFGVCMWEIL 586
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 34/201 (16%)
Query: 286 DNKLGAGGFGEVYKGV--LPSGREIAVKRLSKSSGQGA---EEFKNEVVVVAKLQHRNLV 340
D +LG+G FG V KG + + ++ K+ +E E V+ +L + +V
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 341 RLLGFC--------LEDPEK---QGQLDWSRRYK------IIGLIARGILYLHEDSRLRI 383
R++G C +E E L +R K ++ ++ G+ YL E +
Sbjct: 82 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---F 138
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG-----YMAPEYAMH 438
+HRDL N+LL + KISDFG++K D+ A T+G + APE +
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----AQTHGKWPVKWYAPECINY 194
Query: 439 GQFSVKSDVYSFGVLVLEIIT 459
+FS KSDV+SFGVL+ E +
Sbjct: 195 YKFSSKSDVWSFGVLMWEAFS 215
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 33/199 (16%)
Query: 289 LGAGGFGEVYKGVLP-----SGREIAVKRLSKSSG-QGAEEFKNEVVVVAKLQHRNLVRL 342
LG G FG+V +G +AVK L + G Q ++ E+ ++ L H ++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 343 LGFCLEDPEKQGQL-----------DWSRRYKIIGL---------IARGILYLHEDSRLR 382
G C + EK QL D+ R+ +GL I G+ YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVGLAQLLLFAQQICEGMAYLHAQ---H 131
Query: 383 IIHRDLKVSNILLDAEMNPKISDFGMAKIF--GVDQTQGNTSRIAGTYGYMAPEYAMHGQ 440
IHR L N+LLD + KI DFG+AK G + + + + Y APE +
Sbjct: 132 YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECK 190
Query: 441 FSVKSDVYSFGVLVLEIIT 459
F SDV+SFGV + E++T
Sbjct: 191 FYYASDVWSFGVTLYELLT 209
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 288 KLGAGGFGEV-YKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR----- 341
K+G G G V V SG+ +AVK++ Q E NEVV++ QH N+V
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 342 ------------LLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLK 389
L G L D +++ + + + + + LH +IHRD+K
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIK 274
Query: 390 VSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYS 449
+ILL + K+SDFG V + + GT +MAPE + + D++S
Sbjct: 275 SDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 332
Query: 450 FGVLVLEIITGK 461
G++V+E++ G+
Sbjct: 333 LGIMVIEMVDGE 344
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 34/201 (16%)
Query: 286 DNKLGAGGFGEVYKGV--LPSGREIAVKRLSKSSGQGA---EEFKNEVVVVAKLQHRNLV 340
D +LG+G FG V KG + + ++ K+ +E E V+ +L + +V
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 341 RLLGFCLEDP----EKQGQLDWSRRY-------------KIIGLIARGILYLHEDSRLRI 383
R++G C + + +L +Y +++ ++ G+ YL E +
Sbjct: 434 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---F 490
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG-----YMAPEYAMH 438
+HRDL N+LL + KISDFG++K D+ A T+G + APE +
Sbjct: 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----AQTHGKWPVKWYAPECINY 546
Query: 439 GQFSVKSDVYSFGVLVLEIIT 459
+FS KSDV+SFGVL+ E +
Sbjct: 547 YKFSSKSDVWSFGVLMWEAFS 567
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 288 KLGAGGFGEV-YKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR----- 341
K+G G G V V SG+ +AVK++ Q E NEVV++ QH N+V
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 342 ------------LLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLK 389
L G L D +++ + + + + + LH +IHRD+K
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIK 147
Query: 390 VSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYS 449
+ILL + K+SDFG V + + GT +MAPE + + D++S
Sbjct: 148 SDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 205
Query: 450 FGVLVLEIITGK 461
G++V+E++ G+
Sbjct: 206 LGIMVIEMVDGE 217
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 29/206 (14%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKS--SGQGAE-EFKNEVVVVA 332
K + F LG G FG VY + I A+K L KS +G E + + E+ + +
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 333 KLQHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILY 374
L+H N++R+ + ++ +K G+ D R + +A + Y
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHY 130
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPE 434
HE ++IHRD+K N+L+ + KI+DFG + V + GT Y+ PE
Sbjct: 131 CHER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPE 183
Query: 435 YAMHGQFSVKSDVYSFGVLVLEIITG 460
K D++ GVL E + G
Sbjct: 184 MIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 29/206 (14%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKS--SGQGAE-EFKNEVVVVA 332
K + F LG G FG VY + I A+K L KS +G E + + E+ + +
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 333 KLQHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILY 374
L+H N++R+ + ++ +K G+ D R + +A + Y
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHY 129
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPE 434
HE ++IHRD+K N+L+ + KI+DFG + V + GT Y+ PE
Sbjct: 130 CHER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPE 182
Query: 435 YAMHGQFSVKSDVYSFGVLVLEIITG 460
K D++ GVL E + G
Sbjct: 183 MIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 98/220 (44%), Gaps = 34/220 (15%)
Query: 276 IKVATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGAEEFK----NEVVV 330
IK+ F LG G FG+V+ + A+K L K ++ + + V+
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 71
Query: 331 VAKLQHRNLVRL---------LGFCLE---------DPEKQGQLDWSRRYKIIGLIARGI 372
+H L + L F +E + + D SR I G+
Sbjct: 72 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGL 131
Query: 373 LYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK--IFGVDQTQGNTSRIAGTYGY 430
+LH I++RDLK+ NILLD + + KI+DFGM K + G T+ GT Y
Sbjct: 132 QFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG----DAKTNXFCGTPDY 184
Query: 431 MAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 470
+APE + +++ D +SFGVL+ E++ G+ S F+ D
Sbjct: 185 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQD 222
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 34/201 (16%)
Query: 286 DNKLGAGGFGEVYKGV--LPSGREIAVKRLSKSSGQGA---EEFKNEVVVVAKLQHRNLV 340
D +LG+G FG V KG + + ++ K+ +E E V+ +L + +V
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 341 RLLGFCLEDP----EKQGQLDWSRRY-------------KIIGLIARGILYLHEDSRLRI 383
R++G C + + +L +Y +++ ++ G+ YL E +
Sbjct: 435 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---F 491
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG-----YMAPEYAMH 438
+HRDL N+LL + KISDFG++K D+ A T+G + APE +
Sbjct: 492 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----AQTHGKWPVKWYAPECINY 547
Query: 439 GQFSVKSDVYSFGVLVLEIIT 459
+FS KSDV+SFGVL+ E +
Sbjct: 548 YKFSSKSDVWSFGVLMWEAFS 568
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 35/209 (16%)
Query: 281 NKFSTDNKLGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN---EVVVVAKLQH 336
N ++G+G G+V+K +G IAVK++ +S + EE K ++ VV K
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK--EENKRILMDLDVVLKSHD 82
Query: 337 RNLV-----------------RLLGFCLEDPEKQGQLDWSRRY--KIIGLIARGILYLHE 377
+ L+G C E +K+ Q R K+ I + + YL E
Sbjct: 83 CPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE 142
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY-- 435
+ +IHRD+K SNILLD K+ DFG++ D+ + R AG YMAPE
Sbjct: 143 --KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK---DRSAGCAAYMAPERID 197
Query: 436 ---AMHGQFSVKSDVYSFGVLVLEIITGK 461
+ +++DV+S G+ ++E+ TG+
Sbjct: 198 PPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 12/107 (11%)
Query: 369 ARGILY-------LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT 421
AR + Y L + R RI++RDLK NILLD + +ISD G+A V + Q
Sbjct: 286 ARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIK 343
Query: 422 SRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQ 468
R+ GT GYMAPE + +++ D ++ G L+ E+I G+ S F Q
Sbjct: 344 GRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ--SPFQQ 387
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 34/189 (17%)
Query: 303 PSGREIAVKRLSKSSGQGA-EEFKNEVVVVAKLQHRNLVRLL-GFCLEDP---------- 350
P ++A+KR++ Q + +E E+ +++ H N+V F ++D
Sbjct: 38 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97
Query: 351 ---------------EKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILL 395
K G LD S I+ + G+ YLH++ + IHRD+K NILL
Sbjct: 98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILL 154
Query: 396 DAEMNPKISDFGMAKIF--GVDQTQGNTSR-IAGTYGYMAPEYAMHGQ-FSVKSDVYSFG 451
+ + +I+DFG++ G D T+ + GT +MAPE + + K+D++SFG
Sbjct: 155 GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFG 214
Query: 452 VLVLEIITG 460
+ +E+ TG
Sbjct: 215 ITAIELATG 223
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 34/189 (17%)
Query: 303 PSGREIAVKRLSKSSGQGA-EEFKNEVVVVAKLQHRNLVRLL-GFCLEDP---------- 350
P ++A+KR++ Q + +E E+ +++ H N+V F ++D
Sbjct: 33 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 92
Query: 351 ---------------EKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILL 395
K G LD S I+ + G+ YLH++ + IHRD+K NILL
Sbjct: 93 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILL 149
Query: 396 DAEMNPKISDFGMAKIF--GVDQTQGNTSR-IAGTYGYMAPEYAMHGQ-FSVKSDVYSFG 451
+ + +I+DFG++ G D T+ + GT +MAPE + + K+D++SFG
Sbjct: 150 GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFG 209
Query: 452 VLVLEIITG 460
+ +E+ TG
Sbjct: 210 ITAIELATG 218
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 288 KLGAGGFGEV-YKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR----- 341
K+G G G V V SG+ +AVK++ Q E NEVV++ QH N+V
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 342 ------------LLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLK 389
L G L D +++ + + + + + LH +IHRD+K
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIK 197
Query: 390 VSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYS 449
+ILL + K+SDFG V + + GT +MAPE + + D++S
Sbjct: 198 SDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 255
Query: 450 FGVLVLEIITGK 461
G++V+E++ G+
Sbjct: 256 LGIMVIEMVDGE 267
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 29/206 (14%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKS--SGQGAE-EFKNEVVVVA 332
K + F LG G FG VY + I A+K L KS +G E + + E+ + +
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 333 KLQHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKIIGLIARGILY 374
L+H N++R+ + ++ +K G+ D R + +A + Y
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHY 129
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPE 434
HE ++IHRD+K N+L+ + KI+DFG + V + GT Y+ PE
Sbjct: 130 CHER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPE 182
Query: 435 YAMHGQFSVKSDVYSFGVLVLEIITG 460
K D++ GVL E + G
Sbjct: 183 MIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 12/107 (11%)
Query: 369 ARGILY-------LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT 421
AR + Y L + R RI++RDLK NILLD + +ISD G+A V + Q
Sbjct: 286 ARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIK 343
Query: 422 SRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQ 468
R+ GT GYMAPE + +++ D ++ G L+ E+I G+ S F Q
Sbjct: 344 GRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ--SPFQQ 387
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 53/203 (26%)
Query: 292 GGFGEVYKGVLPSGREIAV----KRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLG--- 344
G FG+VYK +E +V K + S + E++ E+ ++A H N+V+LL
Sbjct: 21 GDFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 77
Query: 345 ----------FC-----------LEDPEKQGQLDWSRRYKIIGLIARGIL----YLHEDS 379
FC LE P + Q I ++ + L YLH++
Sbjct: 78 YENNLWILIEFCAGGAVDAVMLELERPLTESQ---------IQVVCKQTLDALNYLHDN- 127
Query: 380 RLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM-- 437
+IIHRDLK NIL + + K++DFG++ Q S I GT +MAPE M
Sbjct: 128 --KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI-GTPYWMAPEVVMCE 184
Query: 438 ---HGQFSVKSDVYSFGVLVLEI 457
+ K+DV+S G+ ++E+
Sbjct: 185 TSKDRPYDYKADVWSLGITLIEM 207
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 55/208 (26%)
Query: 289 LGAGGFGEVYKGVLPSGRE----IAVKRLSKSSGQGAE-EFKNEVVVVAKLQHRNLVRLL 343
LG G F EV +L + +A+K ++K + +G E +NE+ V+ K++H N+V
Sbjct: 26 LGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV--- 79
Query: 344 GFCLEDPEKQGQLDWSRRYKIIGLIARGIL---------------------------YLH 376
L+D + G Y I+ L++ G L YLH
Sbjct: 80 --ALDDIYESG----GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
Query: 377 EDSRLRIIHRDLKVSNIL---LDAEMNPKISDFGMAKIFGVDQTQGNT-SRIAGTYGYMA 432
+ L I+HRDLK N+L LD + ISDFG++K+ + G+ S GT GY+A
Sbjct: 134 D---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVA 186
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIITG 460
PE +S D +S GV+ ++ G
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 60/95 (63%), Gaps = 7/95 (7%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSR-IAG 426
I+ G+ +LH+ II+RDLK+ N++LD+E + KI+DFGM K +D G T+R G
Sbjct: 129 ISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD---GVTTREFCG 182
Query: 427 TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
T Y+APE + + D +++GVL+ E++ G+
Sbjct: 183 TPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 55/208 (26%)
Query: 289 LGAGGFGEVYKGVLPSGRE----IAVKRLSKSSGQGAE-EFKNEVVVVAKLQHRNLVRLL 343
LG G F EV +L + +A+K ++K + +G E +NE+ V+ K++H N+V
Sbjct: 26 LGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV--- 79
Query: 344 GFCLEDPEKQGQLDWSRRYKIIGLIARGIL---------------------------YLH 376
L+D + G Y I+ L++ G L YLH
Sbjct: 80 --ALDDIYESG----GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
Query: 377 EDSRLRIIHRDLKVSNIL---LDAEMNPKISDFGMAKIFGVDQTQGNT-SRIAGTYGYMA 432
+ L I+HRDLK N+L LD + ISDFG++K+ + G+ S GT GY+A
Sbjct: 134 D---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVA 186
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIITG 460
PE +S D +S GV+ ++ G
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 38/231 (16%)
Query: 261 NDLTTLESLQFDF-EAIKVATNKFSTDNKLGAGGFGEVYKGVL-PSGREIAVKRLSKSSG 318
+ L L LQ+ + EA + + F LG GGFGEV+ + +G+ A K+L+K
Sbjct: 164 DSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRL 223
Query: 319 QGAEEFKNEVV---VVAKLQHRNLVRL-------LGFCLEDPEKQGQLDWSRRYKIIGL- 367
+ + ++ +V ++AK+ R +V L CL G RY I +
Sbjct: 224 KKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGG---DIRYHIYNVD 280
Query: 368 -----------------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK 410
I G+ +LH+ + II+RDLK N+LLD + N +ISD G+A
Sbjct: 281 EDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAV 337
Query: 411 IFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
QT+ T AGT G+MAPE + ++ D ++ GV + E+I +
Sbjct: 338 ELKAGQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 55/223 (24%)
Query: 281 NKFSTDNKLGAGGFGEVYKGVLPSG---REIAVKRLSK-SSGQGAEEFKNEVVVVAKL-Q 335
N + +G G FG+V K + + A+KR+ + +S +F E+ V+ KL
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 336 HRNLVRLLGFC---------LEDPEKQGQLDWSRRYKII--------------------- 365
H N++ LLG C +E LD+ R+ +++
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 366 ----GLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT 421
+ARG+ YL S+ + IHR+L NIL+ KI+DFG+++ G
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR--------GQE 190
Query: 422 SRIAGTYG-----YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ T G +MA E + ++ SDV+S+GVL+ EI++
Sbjct: 191 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 44/210 (20%)
Query: 283 FSTDNKLGAGGFGEVY-KGVLPSGREIAVKRLSKSSGQ-GAEEFKNEVVVVAKLQHRNLV 340
F KLG+G FG+V+ SG E +K ++K Q E+ + E+ V+ L H N++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 341 RL---------LGFCLEDPEKQGQLDWSRRYKIIGLIARG------------------IL 373
++ + +E E L+ +I+ ARG +
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLE-----RIVSAQARGKALSEGYVAELMKQMMNALA 138
Query: 374 YLHEDSRLRIIHRDLKVSNILLD--AEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGY 430
Y H ++H+DLK NIL + +P KI DFG+A++F D+ N AGT Y
Sbjct: 139 YFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA---AGTALY 192
Query: 431 MAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
MAPE + K D++S GV++ ++TG
Sbjct: 193 MAPE-VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 55/208 (26%)
Query: 289 LGAGGFGEVYKGVLPSGRE----IAVKRLSKSSGQGAE-EFKNEVVVVAKLQHRNLVRLL 343
LG G F EV +L + +A+K ++K + +G E +NE+ V+ K++H N+V
Sbjct: 26 LGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV--- 79
Query: 344 GFCLEDPEKQGQLDWSRRYKIIGLIARGIL---------------------------YLH 376
L+D + G Y I+ L++ G L YLH
Sbjct: 80 --ALDDIYESG----GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
Query: 377 EDSRLRIIHRDLKVSNIL---LDAEMNPKISDFGMAKIFGVDQTQGNT-SRIAGTYGYMA 432
+ L I+HRDLK N+L LD + ISDFG++K+ + G+ S GT GY+A
Sbjct: 134 D---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVA 186
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIITG 460
PE +S D +S GV+ ++ G
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
I G+ +LH+ + II+RDLK N+LLD + N +ISD G+A QT+ T AGT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGT 352
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
G+MAPE + ++ D ++ GV + E+I +
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 55/208 (26%)
Query: 289 LGAGGFGEVYKGVLPSGRE----IAVKRLSKSSGQGAE-EFKNEVVVVAKLQHRNLVRLL 343
LG G F EV +L + +A+K ++K + +G E +NE+ V+ K++H N+V
Sbjct: 26 LGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV--- 79
Query: 344 GFCLEDPEKQGQLDWSRRYKIIGLIARGIL---------------------------YLH 376
L+D + G Y I+ L++ G L YLH
Sbjct: 80 --ALDDIYESG----GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
Query: 377 EDSRLRIIHRDLKVSNIL---LDAEMNPKISDFGMAKIFGVDQTQGNT-SRIAGTYGYMA 432
+ L I+HRDLK N+L LD + ISDFG++K+ + G+ S GT GY+A
Sbjct: 134 D---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVA 186
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIITG 460
PE +S D +S GV+ ++ G
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
I G+ +LH+ + II+RDLK N+LLD + N +ISD G+A QT+ T AGT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGT 352
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
G+MAPE + ++ D ++ GV + E+I +
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 34/204 (16%)
Query: 283 FSTDNKLGAGGFGEVYKGVLPSGRE-IAVKRLSKSSGQGAEEFKN---EVVVVAKLQHRN 338
FS ++G G FG VY E +A+K++S S Q E++++ EV + KL+H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 339 LVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIARGIL----YLHEDSR 380
++ G +CL ++ ++ I + G L YLH +
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN- 174
Query: 381 LRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM--- 437
+IHRD+K NILL K+ DFG A I + GT +MAPE +
Sbjct: 175 --MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMD 226
Query: 438 HGQFSVKSDVYSFGVLVLEIITGK 461
GQ+ K DV+S G+ +E+ K
Sbjct: 227 EGQYDGKVDVWSLGITCIELAERK 250
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 30/195 (15%)
Query: 288 KLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LG G FG+VYK +G A K + S + E++ E+ ++A H +V+LLG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 347 LEDPEK---------------QGQLDWSRRYKIIGLIARGIL----YLHEDSRLRIIHRD 387
D + +LD I ++ R +L +LH RIIHRD
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRD 134
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM-----HGQFS 442
LK N+L+ E + +++DFG++ + Q S I GT +MAPE M +
Sbjct: 135 LKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFI-GTPYWMAPEVVMCETMKDTPYD 192
Query: 443 VKSDVYSFGVLVLEI 457
K+D++S G+ ++E+
Sbjct: 193 YKADIWSLGITLIEM 207
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
I G+ +LH+ + II+RDLK N+LLD + N +ISD G+A QT+ T AGT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGT 352
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
G+MAPE + ++ D ++ GV + E+I +
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 30/195 (15%)
Query: 288 KLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC 346
+LG G FG+VYK +G A K + S + E++ E+ ++A H +V+LLG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 347 LEDPEK---------------QGQLDWSRRYKIIGLIARGIL----YLHEDSRLRIIHRD 387
D + +LD I ++ R +L +LH RIIHRD
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRD 142
Query: 388 LKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM-----HGQFS 442
LK N+L+ E + +++DFG++ + Q S I GT +MAPE M +
Sbjct: 143 LKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFI-GTPYWMAPEVVMCETMKDTPYD 200
Query: 443 VKSDVYSFGVLVLEI 457
K+D++S G+ ++E+
Sbjct: 201 YKADIWSLGITLIEM 215
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 54/229 (23%)
Query: 281 NKFSTDNKLGAGGFGEVYK----GVLP--SGREIAVKRL-SKSSGQGAEEFKNEVVVVAK 333
N +G G FG V++ G+LP +AVK L ++S +F+ E ++A+
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 334 LQHRNLVRLLGFC--------LEDPEKQGQL------------------DWSRRYK---- 363
+ N+V+LLG C L + G L D S R +
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 364 ------------IIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK- 410
I +A G+ YL E + +HRDL N L+ M KI+DFG+++
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 411 IFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
I+ D + + + A +M PE + +++ +SDV+++GV++ EI +
Sbjct: 224 IYSADYYKADGND-AIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 36/198 (18%)
Query: 289 LGAGGFGEVY--KGVLPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
+G G F +V + VL +GRE+AVK + K+ + ++ EV ++ L H N+V+L
Sbjct: 23 IGKGNFAKVKLARHVL-TGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL-- 79
Query: 345 FCLEDPEK--------------------QGQLDWSRRYKIIGLIARGILYLHEDSRLRII 384
F + + EK G++ I + Y H+ I+
Sbjct: 80 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKY---IV 136
Query: 385 HRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT-SRIAGTYGYMAPEYAMHGQFS- 442
HRDLK N+LLD +MN KI+DFG + F V GN G+ Y APE ++
Sbjct: 137 HRDLKAENLLLDGDMNIKIADFGFSNEFTV----GNKLDTFCGSPPYAAPELFQGKKYDG 192
Query: 443 VKSDVYSFGVLVLEIITG 460
+ DV+S GV++ +++G
Sbjct: 193 PEVDVWSLGVILYTLVSG 210
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 33/199 (16%)
Query: 289 LGAGGFGEVYKGVLP-----SGREIAVKRLSKSSG-QGAEEFKNEVVVVAKLQHRNLVRL 342
LG G FG+V +G +AVK L +G Q +K E+ ++ L H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 343 LGFCLEDPEKQGQL-----------DWSRRYKIIGL---------IARGILYLHEDSRLR 382
G C + QL D+ R+ I GL I G+ YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSI-GLAQLLLFAQQICEGMAYLHAQ---H 154
Query: 383 IIHRDLKVSNILLDAEMNPKISDFGMAKIF--GVDQTQGNTSRIAGTYGYMAPEYAMHGQ 440
IHRDL N+LLD + KI DFG+AK G + + + + Y APE +
Sbjct: 155 YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECLKEYK 213
Query: 441 FSVKSDVYSFGVLVLEIIT 459
F SDV+SFGV + E++T
Sbjct: 214 FYYASDVWSFGVTLYELLT 232
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 103/257 (40%), Gaps = 41/257 (15%)
Query: 244 RRKAKKKYNA---VPEGNADNDLTTLESLQFDF-EAIKVATNKFSTDNKLGAGGFGEVYK 299
+ K K KY + E N T ++ Q + E + N LGAG FG+V +
Sbjct: 5 KYKQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVE 64
Query: 300 G-VLPSGRE-----IAVKRL-SKSSGQGAEEFKNEVVVVAKL-QHRNLVRLLGFCLED-- 349
G+E +AVK L S + E +E+ +++ L QH N+V LLG C
Sbjct: 65 ATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124
Query: 350 -----------------PEKQGQLDWSRRYKIIGLIARGILYLHEDSRL----------R 382
K L+ + I A LH S++
Sbjct: 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN 184
Query: 383 IIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFS 442
IHRD+ N+LL KI DFG+A+ D +MAPE ++
Sbjct: 185 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT 244
Query: 443 VKSDVYSFGVLVLEIIT 459
V+SDV+S+G+L+ EI +
Sbjct: 245 VQSDVWSYGILLWEIFS 261
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 94/208 (45%), Gaps = 40/208 (19%)
Query: 284 STDNKLGAGGFGEVYKGVLPSGRE----IAVKRLSK-SSGQGAEEFKNEVVVVAKLQHRN 338
+D +G G FG VY G + A+K LS+ + Q E F E +++ L H N
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN 83
Query: 339 LVRLLGFCLEDPEK----------QGQL-----DWSRRYKIIGLI------ARGILYLHE 377
++ L+G L PE G L R + LI ARG+ YL E
Sbjct: 84 VLALIGIMLP-PEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE 142
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK------IFGVDQTQGNTSRIAGTYGYM 431
+ +HRDL N +LD K++DFG+A+ + V Q + + T
Sbjct: 143 Q---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT---- 195
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIIT 459
A E +F+ KSDV+SFGVL+ E++T
Sbjct: 196 ALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 36/198 (18%)
Query: 289 LGAGGFGEVY--KGVLPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
+G G F +V + +L +G+E+AVK + K+ + ++ EV ++ L H N+V+L
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL-- 78
Query: 345 FCLEDPEK--------------------QGQLDWSRRYKIIGLIARGILYLHEDSRLRII 384
F + + EK G++ I + Y H+ I+
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IV 135
Query: 385 HRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT-SRIAGTYGYMAPEYAMHGQFS- 442
HRDLK N+LLDA+MN KI+DFG + F T GN G+ Y APE ++
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 443 VKSDVYSFGVLVLEIITG 460
+ DV+S GV++ +++G
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 34/204 (16%)
Query: 283 FSTDNKLGAGGFGEVYKGVLPSGRE-IAVKRLSKSSGQGAEEFKN---EVVVVAKLQHRN 338
FS ++G G FG VY E +A+K++S S Q E++++ EV + KL+H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 339 LVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIARGIL----YLHEDSR 380
++ G +CL ++ ++ I + G L YLH +
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN- 135
Query: 381 LRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM--- 437
+IHRD+K NILL K+ DFG A I + GT +MAPE +
Sbjct: 136 --MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMD 187
Query: 438 HGQFSVKSDVYSFGVLVLEIITGK 461
GQ+ K DV+S G+ +E+ K
Sbjct: 188 EGQYDGKVDVWSLGITCIELAERK 211
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 288 KLGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEE--FKNEVVVVAKLQHRNLVRLLG 344
++G G +G V K V PSG+ +AVKR+ + + ++ + VV+ +V+ G
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 345 ---------FCLEDPEKQGQLDWSRRYKIIG-LIARGIL----------YLHEDSRLRII 384
C+E + Y ++ +I IL H L+II
Sbjct: 89 ALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKII 148
Query: 385 HRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY----AMHGQ 440
HRD+K SNILLD N K+ DFG++ VD +R AG YMAPE A
Sbjct: 149 HRDIKPSNILLDRSGNIKLCDFGISGQL-VDSIA--KTRDAGCRPYMAPERIDPSASRQG 205
Query: 441 FSVKSDVYSFGVLVLEIITG-----KKNSSFYQ 468
+ V+SDV+S G+ + E+ TG K NS F Q
Sbjct: 206 YDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ 238
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 36/198 (18%)
Query: 289 LGAGGFGEVY--KGVLPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
+G G F +V + +L +G+E+AVK + K+ + ++ EV ++ L H N+V+L
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL-- 78
Query: 345 FCLEDPEK--------------------QGQLDWSRRYKIIGLIARGILYLHEDSRLRII 384
F + + EK G++ I + Y H+ I+
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IV 135
Query: 385 HRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT-SRIAGTYGYMAPEYAMHGQFS- 442
HRDLK N+LLDA+MN KI+DFG + F T GN G+ Y APE ++
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 443 VKSDVYSFGVLVLEIITG 460
+ DV+S GV++ +++G
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 32/216 (14%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYK-GVLPSGREIAVKRLSKS---SGQGAEEFKNEVVVVA 332
K + F LG G FG V+ +GR A+K L K + E +E ++++
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 333 KLQHRNLVRLLG--------FCLEDPEKQGQL----DWSRRYK------IIGLIARGILY 374
+ H ++R+ G F + D + G+L S+R+ + + Y
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEY 121
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPE 434
LH II+RDLK NILLD + KI+DFG AK T + GT Y+APE
Sbjct: 122 LHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKY-----VPDVTYXLCGTPDYIAPE 173
Query: 435 YAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 470
++ D +SFG+L+ E++ G + FY ++
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAGY--TPFYDSN 207
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 49/224 (21%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLS---KSSGQGAEEFKNEVVVVAKLQ-H 336
K+ KLG G +G V+K + +G +AVK++ ++S F+ E++++ +L H
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGH 68
Query: 337 RNLVRLLGFCLEDPEKQGQLDWS-------------------RRYKIIGLIARGILYLHE 377
N+V LL D ++ L + ++Y + LI + I YLH
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLI-KVIKYLHS 127
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIF-------------------GVDQTQ 418
++HRD+K SNILL+AE + K++DFG+++ F D Q
Sbjct: 128 GG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 419 GNTSRIAGTYGYMAPEYAM-HGQFSVKSDVYSFGVLVLEIITGK 461
+ T Y APE + +++ D++S G ++ EI+ GK
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 103/260 (39%), Gaps = 47/260 (18%)
Query: 244 RRKAKKKYNA---VPEGNADNDLTTLESLQFDF-EAIKVATNKFSTDNKLGAGGFGEVYK 299
+ K K KY + E N T ++ Q + E + N LGAG FG+V +
Sbjct: 5 KYKQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVE 64
Query: 300 G-VLPSGRE-----IAVKRL-SKSSGQGAEEFKNEVVVVAKL-QHRNLVRLLGFCLE--- 348
G+E +AVK L S + E +E+ +++ L QH N+V LLG C
Sbjct: 65 ATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124
Query: 349 --------------------------DPE---KQGQLDWSRRYKIIGLIARGILYLHEDS 379
DP L +A+G+ +L +
Sbjct: 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKN 184
Query: 380 RLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHG 439
IHRD+ N+LL KI DFG+A+ D +MAPE
Sbjct: 185 ---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDC 241
Query: 440 QFSVKSDVYSFGVLVLEIIT 459
++V+SDV+S+G+L+ EI +
Sbjct: 242 VYTVQSDVWSYGILLWEIFS 261
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 42/229 (18%)
Query: 260 DNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKS 316
DN+ ++E F +K ++ +G+G G V Y +L R +A+K+LS+
Sbjct: 7 DNNFYSVEIGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRP 60
Query: 317 --SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK---------------------- 352
+ A+ E+V++ + H+N++ LL P+K
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVF--TPQKSLEEFQDVYIVMELMDANLSQV 118
Query: 353 -QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKI 411
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+A+
Sbjct: 119 IQMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 412 FGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
G T + T Y APE + + D++S GV++ E+I G
Sbjct: 176 AG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 36/198 (18%)
Query: 289 LGAGGFGEVY--KGVLPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
+G G F +V + +L +G+E+AV+ + K+ + ++ EV ++ L H N+V+L
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL-- 78
Query: 345 FCLEDPEK--------------------QGQLDWSRRYKIIGLIARGILYLHEDSRLRII 384
F + + EK G++ I + Y H+ I+
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IV 135
Query: 385 HRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT-SRIAGTYGYMAPEYAMHGQFS- 442
HRDLK N+LLDA+MN KI+DFG + F T GN G+ Y APE ++
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDEFCGSPPYAAPELFQGKKYDG 191
Query: 443 VKSDVYSFGVLVLEIITG 460
+ DV+S GV++ +++G
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 43/241 (17%)
Query: 249 KKYNAVPEGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSG 305
K YN + + DN ++E F +K ++ +G+G G V Y VL
Sbjct: 35 KHYN-MSKSKVDNQFYSVEVGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAVL--D 87
Query: 306 REIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK----------- 352
R +A+K+LS+ + A+ E+V++ + H+N++ LL + P+K
Sbjct: 88 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN--VFTPQKTLEEFQDVYLV 145
Query: 353 ------------QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMN 400
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++
Sbjct: 146 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCT 202
Query: 401 PKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
KI DFG+A+ G T + T Y APE + + D++S G ++ E++
Sbjct: 203 LKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 259
Query: 461 K 461
K
Sbjct: 260 K 260
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 42/229 (18%)
Query: 260 DNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKS 316
DN+ ++E F +K ++ +G+G G V Y +L R +A+K+LS+
Sbjct: 7 DNNFYSVEIGDSTFTVLK----RYQNLKPIGSGAQGIVVAAYDAIL--ERNVAIKKLSRP 60
Query: 317 --SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK---------------------- 352
+ A+ E+V++ + H+N++ LL P+K
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVF--TPQKSLEEFQDVYIVMELMDANLSQV 118
Query: 353 -QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKI 411
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+A+
Sbjct: 119 IQMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 412 FGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
G T + T Y APE + + D++S GV++ E+I G
Sbjct: 176 AG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 36/198 (18%)
Query: 289 LGAGGFGEVY--KGVLPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
+G G F +V + +L +G+E+AVK + K+ + ++ EV ++ L H N+V+L
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL-- 78
Query: 345 FCLEDPEK--------------------QGQLDWSRRYKIIGLIARGILYLHEDSRLRII 384
F + + EK G++ I + Y H+ I+
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IV 135
Query: 385 HRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT-SRIAGTYGYMAPEYAMHGQFS- 442
HRDLK N+LLDA+MN KI+DFG + F T GN G Y APE ++
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 443 VKSDVYSFGVLVLEIITG 460
+ DV+S GV++ +++G
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 34/197 (17%)
Query: 289 LGAGGFGEVY--KGVLPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
+G G F +V + +L +G+E+AVK + K+ + ++ EV ++ L H N+V+L
Sbjct: 15 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF- 72
Query: 345 FCLEDPEKQGQLDWSRRYKIIG-----LIARGILYLHE-DSRLR-------------IIH 385
E E + L Y G L+A G + E ++ R I+H
Sbjct: 73 ---EVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVH 129
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT-SRIAGTYGYMAPEYAMHGQFS-V 443
RDLK N+LLDA+MN KI+DFG + F T GN G+ Y APE ++
Sbjct: 130 RDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCGSPPYAAPELFQGKKYDGP 185
Query: 444 KSDVYSFGVLVLEIITG 460
+ DV+S GV++ +++G
Sbjct: 186 EVDVWSLGVILYTLVSG 202
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 42/234 (17%)
Query: 256 EGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKR 312
+ DN ++E F +K ++ +G+G G V Y VL R +A+K+
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKK 56
Query: 313 LSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK------------------ 352
LS+ + A+ E+V++ + H+N++ LL P+K
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELMDAN 114
Query: 353 -----QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFG 407
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 115 LXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 408 MAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
+A+ G T + T Y APE + + D++S G ++ E++ K
Sbjct: 172 LARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 36/198 (18%)
Query: 289 LGAGGFGEVY--KGVLPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
+G G F +V + +L +G+E+AV+ + K+ + ++ EV ++ L H N+V+L
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL-- 78
Query: 345 FCLEDPEK--------------------QGQLDWSRRYKIIGLIARGILYLHEDSRLRII 384
F + + EK G++ I + Y H+ I+
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IV 135
Query: 385 HRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT-SRIAGTYGYMAPEYAMHGQFS- 442
HRDLK N+LLDA+MN KI+DFG + F T GN G+ Y APE ++
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 443 VKSDVYSFGVLVLEIITG 460
+ DV+S GV++ +++G
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 102/250 (40%), Gaps = 50/250 (20%)
Query: 257 GNADNDLTTL----ESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYK----GVLPSG--R 306
G D D L E L +D + ++ LG G FG+V + G+ + R
Sbjct: 1 GAMDPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCR 60
Query: 307 EIAVKRLSKSSGQGAEE-FKNEVVVVAKL-QHRNLVRLLGFCLED--------------- 349
+AVK L + + +E+ ++ + H N+V LLG C +
Sbjct: 61 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 120
Query: 350 -------------PEKQGQLDWSRRYKIIGL-------IARGILYLHEDSRLRIIHRDLK 389
P K+ D + + + +A+G+ +L + + IHRDL
Sbjct: 121 LSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 177
Query: 390 VSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYS 449
NILL + KI DFG+A+ D +MAPE ++++SDV+S
Sbjct: 178 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 237
Query: 450 FGVLVLEIIT 459
FGVL+ EI +
Sbjct: 238 FGVLLWEIFS 247
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 38/211 (18%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVL----PSGREIAVKRL--SKSSGQGAEEFKNEVVVVA 332
+ K+ K+G G FG K +L GR+ +K + S+ S + EE + EV V+A
Sbjct: 22 SMEKYVRLQKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLA 78
Query: 333 KLQHRNLVRLLGFCLEDPEKQGQL----DWSRRYKIIGLI--ARGILYLHEDSRL----- 381
++H N+V+ E E+ G L D+ + I +G+L+ ED L
Sbjct: 79 NMKHPNIVQYR----ESFEENGSLYIVMDYCEGGDLFKRINAQKGVLF-QEDQILDWFVQ 133
Query: 382 -----------RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGY 430
+I+HRD+K NI L + ++ DFG+A++ ++ T GT Y
Sbjct: 134 ICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYY 191
Query: 431 MAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
++PE + ++ KSD+++ G ++ E+ T K
Sbjct: 192 LSPEICENKPYNNKSDIWALGCVLYELCTLK 222
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 43/241 (17%)
Query: 249 KKYNAVPEGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSG 305
K YN + + DN ++E F +K ++ +G+G G V Y VL
Sbjct: 35 KHYN-MSKSKVDNQFYSVEVGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAVL--D 87
Query: 306 REIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK----------- 352
R +A+K+LS+ + A+ E+V++ + H+N++ LL P+K
Sbjct: 88 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF--TPQKTLEEFQDVYLV 145
Query: 353 ------------QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMN 400
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++
Sbjct: 146 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCT 202
Query: 401 PKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
KI DFG+A+ G T + T Y APE + + D++S G ++ E++
Sbjct: 203 LKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 259
Query: 461 K 461
K
Sbjct: 260 K 260
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 111
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ ++ +SR + + +I R + Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 172 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 225
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 103/248 (41%), Gaps = 48/248 (19%)
Query: 257 GNADNDLTTL----ESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYK----GV--LPSGR 306
G+ D D L E L +D + ++ LG G FG+V + G+ + R
Sbjct: 1 GSMDPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXR 60
Query: 307 EIAVKRLSKSSGQGAEE-FKNEVVVVAKL-QHRNLVRLLGFCLED--------------- 349
+AVK L + + +E+ ++ + H N+V LLG C +
Sbjct: 61 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 120
Query: 350 -------------PEKQGQL--DWSRRYKIIGL---IARGILYLHEDSRLRIIHRDLKVS 391
P K L D+ +I +A+G+ +L + + IHRDL
Sbjct: 121 LSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAAR 177
Query: 392 NILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFG 451
NILL + KI DFG+A+ D +MAPE ++++SDV+SFG
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 452 VLVLEIIT 459
VL+ EI +
Sbjct: 238 VLLWEIFS 245
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 103/250 (41%), Gaps = 55/250 (22%)
Query: 261 NDLTTLESLQFDF-EAIKVATNKFSTDNKLGAGGFGEVYKG-VLPSGRE-----IAVKRL 313
N T ++ Q + E + N LGAG FG+V + G+E +AVK L
Sbjct: 10 NSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML 69
Query: 314 -SKSSGQGAEEFKNEVVVVAKL-QHRNLVRLLGFCL------------------------ 347
S + E +E+ +++ L QH N+V LLG C
Sbjct: 70 KSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK 129
Query: 348 ------------EDPEKQGQLDWSRRYKIIGL------IARGILYLHEDSRLRIIHRDLK 389
+DPE + D R ++ L +A+G+ +L + IHRD+
Sbjct: 130 AEAMLGPSLAPGQDPEGLDKED-GRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVA 185
Query: 390 VSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYS 449
N+LL KI DFG+A+ D +MAPE ++V+SDV+S
Sbjct: 186 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS 245
Query: 450 FGVLVLEIIT 459
+G+L+ EI +
Sbjct: 246 YGILLWEIFS 255
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 51 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 105
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ ++ +SR + + +I R + Y
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 166 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY-YRAP 219
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 220 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 39/218 (17%)
Query: 278 VATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRLSKSSGQGAEEF-----KNEVVVV 331
+AT+++ ++G G +G VYK P SG +A+K + +G G EV ++
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 332 AKLQ---HRNLVRLLGFCLE---DPEKQGQLDWSR----------RYKIIGLIA------ 369
+L+ H N+VRL+ C D E + L + + GL A
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 125
Query: 370 -----RGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRI 424
RG+ +LH + I+HRDLK NIL+ + K++DFG+A+I+ Q + +
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALTPV 179
Query: 425 AGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKK 462
T Y APE + ++ D++S G + E+ K
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 217
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 42/234 (17%)
Query: 256 EGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKR 312
+ DN ++E F +K ++ +G+G G V Y VL R +A+K+
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKK 56
Query: 313 LSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK------------------ 352
LS+ + A+ E+V++ + H+N++ LL P+K
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELMDAN 114
Query: 353 -----QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFG 407
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 408 MAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
+A+ G T + T Y APE + + D++S G ++ E++ K
Sbjct: 172 LARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 31/198 (15%)
Query: 289 LGAGGFGEVYKGVLPSGREIAV-KRLSKSSGQGAEE--FKNEVVVVAKLQHRNLVRLLGF 345
+G G +G K S +I V K L S AE+ +EV ++ +L+H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 346 CLEDPEKQGQ--LDWSRRYKIIGLIARGI---LYLHEDSRLRI----------------- 383
++ +++ + +I +G YL E+ LR+
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 384 ----IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHG 439
+HRDLK +N+ LD + N K+ DFG+A+I D + T GT YM+PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQMNRM 191
Query: 440 QFSVKSDVYSFGVLVLEI 457
++ KSD++S G L+ E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 42/232 (18%)
Query: 267 ESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYK----GV--LPSGREIAVKRLSKSSGQG 320
E L +D + ++ + LG G FG+V + G+ + R +AVK L + +
Sbjct: 13 ERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS 72
Query: 321 AEE-FKNEVVVVAKL-QHRNLVRLLGFCLED----------------------------P 350
+E+ ++ + H N+V LLG C + P
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 351 EKQGQLDWSRRYKIIGL---IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFG 407
K D+ +I +A+G+ +L + + IHRDL NILL + KI DFG
Sbjct: 133 YKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFG 189
Query: 408 MAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 190 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
IA G+ +L II+RDLK+ N++LD+E + KI+DFGM K D T GT
Sbjct: 451 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKXFCGT 505
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
Y+APE + + D ++FGVL+ E++ G+
Sbjct: 506 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 38/203 (18%)
Query: 292 GGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGF------ 345
G FG V+K L + +AVK Q + + E+ ++H NL++ +
Sbjct: 26 GRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRGSN 83
Query: 346 ---------------CLEDPEKQGQLDWSRRYKIIGLIARGILYLHED--------SRLR 382
L D K + W+ + ++RG+ YLHED +
Sbjct: 84 LEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPS 143
Query: 383 IIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFS 442
I HRD K N+LL +++ ++DFG+A F + G+T GT YMAPE + G +
Sbjct: 144 IAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE-VLEGAIN 202
Query: 443 ------VKSDVYSFGVLVLEIIT 459
++ D+Y+ G+++ E+++
Sbjct: 203 FQRDAFLRIDMYAMGLVLWELVS 225
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 46/236 (19%)
Query: 267 ESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYK----GVLPSG--REIAVKRLSKSSGQG 320
E L +D + ++ LG G FG+V + G+ + R +AVK L + +
Sbjct: 13 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72
Query: 321 AEE-FKNEVVVVAKL-QHRNLVRLLGFCLED----------------------------P 350
+E+ ++ + H N+V LLG C + P
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 351 EKQGQLDWSRRYKIIGL-------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKI 403
K D + + + +A+G+ +L + + IHRDL NILL + KI
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 189
Query: 404 SDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
DFG+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 190 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 111
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ ++ +SR + + +I R + Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 172 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY-YRAP 225
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 61 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 115
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ ++ +SR + + +I R + Y
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 176 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY-YRAP 229
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 230 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 42/234 (17%)
Query: 256 EGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKR 312
+ DN ++E F +K ++ +G+G G V Y VL R +A+K+
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKK 56
Query: 313 LSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK------------------ 352
LS+ + A+ E+V++ + H+N++ LL P+K
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELMDAN 114
Query: 353 -----QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFG 407
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 115 LXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 408 MAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
+A+ G T + T Y APE + + D++S G ++ E++ K
Sbjct: 172 LARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 59 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 113
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ ++ +SR + + +I R + Y
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 174 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY-YRAP 227
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 228 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 42/232 (18%)
Query: 267 ESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYK----GV--LPSGREIAVKRLSKSSGQG 320
E L +D + ++ + LG G FG+V + G+ + R +AVK L + +
Sbjct: 13 ERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS 72
Query: 321 AEE-FKNEVVVVAKL-QHRNLVRLLGFCLED----------------------------P 350
+E+ ++ + H N+V LLG C + P
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 351 EKQGQLDWSRRYKIIGL---IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFG 407
K D+ +I +A+G+ +L + + IHRDL NILL + KI DFG
Sbjct: 133 YKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFG 189
Query: 408 MAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 190 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 46/236 (19%)
Query: 267 ESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYK----GVLPSG--REIAVKRLSKSSGQG 320
E L +D + ++ LG G FG+V + G+ + R +AVK L + +
Sbjct: 4 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 321 AEE-FKNEVVVVAKL-QHRNLVRLLGFCLED----------------------------P 350
+E+ ++ + H N+V LLG C + P
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 351 EKQGQLDWSRRYKIIGL-------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKI 403
K D + + + +A+G+ +L + + IHRDL NILL + KI
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 180
Query: 404 SDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
DFG+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 181 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 46/236 (19%)
Query: 267 ESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYK----GVLPSG--REIAVKRLSKSSGQG 320
E L +D + ++ LG G FG+V + G+ + R +AVK L + +
Sbjct: 4 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 321 AEE-FKNEVVVVAKL-QHRNLVRLLGFCLED----------------------------P 350
+E+ ++ + H N+V LLG C + P
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 123
Query: 351 EKQGQLDWSRRYKIIGL-------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKI 403
K D + + + +A+G+ +L + + IHRDL NILL + KI
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 180
Query: 404 SDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
DFG+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 181 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 32/208 (15%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYK-GVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQ 335
++ + F ++LGAG G V+K PSG +A K + + +N+++ ++
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL---EIKPAIRNQIIRELQVL 61
Query: 336 HR-NLVRLLGF------------CLEDPE---------KQGQLDWSRRYKIIGLIARGIL 373
H N ++GF C+E + K G++ K+ + +G+
Sbjct: 62 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 121
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YL E + +I+HRD+K SNIL+++ K+ DFG++ +D+ + GT YM+P
Sbjct: 122 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDEM---ANEFVGTRSYMSP 175
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITGK 461
E +SV+SD++S G+ ++E+ G+
Sbjct: 176 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 28 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 82
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ ++ +SR + + +I R + Y
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 143 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY-YRAP 196
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 197 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 42/234 (17%)
Query: 256 EGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKR 312
+ DN ++E F +K ++ +G+G G V Y VL R +A+K+
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKK 56
Query: 313 LSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK------------------ 352
LS+ + A+ E+V++ + H+N++ LL P+K
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELMDAN 114
Query: 353 -----QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFG 407
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 115 LXQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 408 MAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
+A+ G T + T Y APE + + D++S G ++ E++ K
Sbjct: 172 LARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 41/211 (19%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLPSGRE-IAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ +++ KLG G +GEVYK + E +A+KR+ + G + EV ++ +L
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR-EVSLLKEL 90
Query: 335 QHRNLVRL---------LGFCLE------------DPEKQGQLDWSRRYKIIGLIARGIL 373
QHRN++ L L E +P+ ++ S Y++I G+
Sbjct: 91 QHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLIN----GVN 146
Query: 374 YLHEDSRLRIIHRDLKVSNILL---DAEMNP--KISDFGMAKIFGVDQTQGNTSRIAGTY 428
+ H SR R +HRDLK N+LL DA P KI DFG+A+ FG+ Q I T
Sbjct: 147 FCH--SR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII--TL 201
Query: 429 GYMAPEYAMHG-QFSVKSDVYSFGVLVLEII 458
Y PE + +S D++S + E++
Sbjct: 202 WYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 102 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 156
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ ++ +SR + + +I R + Y
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 217 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY-YRAP 270
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 271 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 53/253 (20%)
Query: 257 GNADNDLTTLESLQFDFE-AIKVATNKFSTDNKLGAGGFGEVYK----GVLPSGR--EIA 309
G++DN+ ++ +++++ + LG+G FG+V G+ +G ++A
Sbjct: 20 GSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVA 79
Query: 310 VKRL-SKSSGQGAEEFKNEVVVVAKL-QHRNLVRLLGFC-LEDP---------------- 350
VK L K+ E +E+ ++ +L H N+V LLG C L P
Sbjct: 80 VKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNY 139
Query: 351 ---------------EKQGQLDWSRRYKIIGL---------IARGILYLHEDSRLRIIHR 386
E Q +L+ ++ +A+G+ +L S +HR
Sbjct: 140 LRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHR 196
Query: 387 DLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSD 446
DL N+L+ KI DFG+A+ D +MAPE G +++KSD
Sbjct: 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSD 256
Query: 447 VYSFGVLVLEIIT 459
V+S+G+L+ EI +
Sbjct: 257 VWSYGILLWEIFS 269
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 31 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 85
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ ++ +SR + + +I R + Y
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 146 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 199
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 200 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 33/216 (15%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREI----AVKRLSKSS----GQGAEEFK 325
A KV F LG G +G+V+ SG + A+K L K++ + E +
Sbjct: 47 HAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTR 106
Query: 326 NEVVVVAKLQHRNLVRLLGFCLEDPEKQ---------GQL--DWSRRYKI--------IG 366
E V+ ++ + L + + K G+L S+R + +G
Sbjct: 107 TERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVG 166
Query: 367 LIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAG 426
I + +LH +L II+RD+K+ NILLD+ + ++DFG++K F D+T+ G
Sbjct: 167 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCG 222
Query: 427 TYGYMAPEYAMHGQ--FSVKSDVYSFGVLVLEIITG 460
T YMAP+ G D +S GVL+ E++TG
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 35 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 89
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ ++ +SR + + +I R + Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 150 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 203
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 42 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 96
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ ++ +SR + + +I R + Y
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 157 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 210
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 211 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 102/208 (49%), Gaps = 32/208 (15%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYK-GVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQ 335
++ + F ++LGAG G V+K PSG +A K + + +N+++ ++
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL---EIKPAIRNQIIRELQVL 120
Query: 336 HR-NLVRLLGF------------CLEDPE---------KQGQLDWSRRYKIIGLIARGIL 373
H N ++GF C+E + K G++ K+ + +G+
Sbjct: 121 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 180
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YL E + +I+HRD+K SNIL+++ K+ DFG++ +D + GT YM+P
Sbjct: 181 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTRSYMSP 234
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITGK 461
E +SV+SD++S G+ ++E+ G+
Sbjct: 235 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 77
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ ++ +SR + + +I R + Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 138 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 191
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 46/236 (19%)
Query: 267 ESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYK----GVLPSG--REIAVKRLSKSSGQG 320
E L +D + ++ LG G FG+V + G+ + R +AVK L + +
Sbjct: 13 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72
Query: 321 AEE-FKNEVVVVAKL-QHRNLVRLLGFCLED----------------------------P 350
+E+ ++ + H N+V LLG C + P
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 351 EKQGQLDWSRRYKIIGL-------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKI 403
K D + + + +A+G+ +L + + IHRDL NILL + KI
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 189
Query: 404 SDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
DFG+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 190 CDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 37/220 (16%)
Query: 276 IKVATNKFSTDNKLGAGGFGEVYK-GVLPSGREIAVKRLSKSS---GQGAEEFKNEVVVV 331
I + N FS +G GGFGEVY +G+ A+K L K QG NE +++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 332 AKLQHRN--LVRLLGFCLEDPEKQ---------GQLDW-----------SRRYKIIGLIA 369
+ + + + + + P+K G L + R+ +I
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIIL 303
Query: 370 RGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG 429
G+ ++H +R +++RDLK +NILLD + +ISD G+A F + + GT+G
Sbjct: 304 -GLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHG 355
Query: 430 YMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQ 468
YMAPE G + +D +S G ++ +++ G +S F Q
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG--HSPFRQ 393
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 35 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 89
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ ++ +SR + + +I R + Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 150 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 203
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 37/220 (16%)
Query: 276 IKVATNKFSTDNKLGAGGFGEVYK-GVLPSGREIAVKRLSKSS---GQGAEEFKNEVVVV 331
I + N FS +G GGFGEVY +G+ A+K L K QG NE +++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 332 AKLQHRN--LVRLLGFCLEDPEKQ---------GQLDW-----------SRRYKIIGLIA 369
+ + + + + + P+K G L + R+ +I
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIIL 303
Query: 370 RGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG 429
G+ ++H +R +++RDLK +NILLD + +ISD G+A F + + GT+G
Sbjct: 304 -GLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHG 355
Query: 430 YMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQ 468
YMAPE G + +D +S G ++ +++ G +S F Q
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG--HSPFRQ 393
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 77
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ ++ +SR + + +I R + Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 138 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 191
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 32/209 (15%)
Query: 276 IKVATNKFSTDNKLGAGGFGEVYK-GVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKL 334
+++ + F ++LGAG G V+K PSG +A K + + +N+++ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL---EIKPAIRNQIIRELQV 57
Query: 335 QHR-NLVRLLGF------------CLEDPE---------KQGQLDWSRRYKIIGLIARGI 372
H N ++GF C+E + K G++ K+ + +G+
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGL 117
Query: 373 LYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMA 432
YL E + +I+HRD+K SNIL+++ K+ DFG++ +D + GT YM+
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTRSYMS 171
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
PE +SV+SD++S G+ ++E+ G+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 24 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 78
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ ++ +SR + + +I R + Y
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 139 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 192
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 193 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 36 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 90
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ ++ +SR + + +I R + Y
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 151 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY-YRAP 204
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 205 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 98/235 (41%), Gaps = 45/235 (19%)
Query: 267 ESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYK----GVLPSG--REIAVKRLSKSSGQG 320
E L +D + ++ + LG G FG+V + G+ + R +AVK L + +
Sbjct: 14 ERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 73
Query: 321 AEE-FKNEVVVVAKL-QHRNLVRLLGFCLED----------------------------P 350
+E+ ++ + H N+V LLG C + P
Sbjct: 74 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 133
Query: 351 EKQGQLDWSRRYKIIGLI------ARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKIS 404
K + + + LI A+G+ +L + + IHRDL NILL + KI
Sbjct: 134 YKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 190
Query: 405 DFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
DFG+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 191 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 45/224 (20%)
Query: 276 IKVATNKFSTDNKLGAGGFGEVYK-GVLPSGREIAVKRLSKSS---GQGAEEFKNEVVVV 331
I + N FS +G GGFGEVY +G+ A+K L K QG NE +++
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 332 AKLQHRN--LVRLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH-------EDSRLR 382
+ + + + + + P+K I+ L+ G L+ H ++ +R
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLS--------FILDLMNGGDLHYHLSQHGVFSEADMR 294
Query: 383 -----------------IIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIA 425
+++RDLK +NILLD + +ISD G+A F + +
Sbjct: 295 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---- 350
Query: 426 GTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQ 468
GT+GYMAPE G + +D +S G ++ +++ G +S F Q
Sbjct: 351 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG--HSPFRQ 392
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 32/209 (15%)
Query: 276 IKVATNKFSTDNKLGAGGFGEVYK-GVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKL 334
+++ + F ++LGAG G V+K PSG +A K + + +N+++ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL---EIKPAIRNQIIRELQV 57
Query: 335 QHR-NLVRLLGF------------CLEDPE---------KQGQLDWSRRYKIIGLIARGI 372
H N ++GF C+E + K G++ K+ + +G+
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGL 117
Query: 373 LYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMA 432
YL E + +I+HRD+K SNIL+++ K+ DFG++ +D + GT YM+
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTRSYMS 171
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
PE +SV+SD++S G+ ++E+ G+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 97/222 (43%), Gaps = 46/222 (20%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKG----VLPSGRE--IAVKRLSKSSGQGAE-EFKNEVV 329
+V+ K + +LG G FG VY+G ++ E +AVK +++S+ EF NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 330 VVAKLQHRNLVRLLG--------FCLEDPEKQGQLDWSRR-------------------- 361
V+ ++VRLLG + + G L R
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 362 YKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT 421
++ IA G+ YL+ + +HRDL N ++ + KI DFGM + D + +
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDX 185
Query: 422 SRIAG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
R G +MAPE G F+ SD++SFGV++ EI +
Sbjct: 186 XRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIH 138
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 139 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 190
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 45/224 (20%)
Query: 276 IKVATNKFSTDNKLGAGGFGEVYK-GVLPSGREIAVKRLSKSS---GQGAEEFKNEVVVV 331
I + N FS +G GGFGEVY +G+ A+K L K QG NE +++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 332 AKLQHRN--LVRLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH-------EDSRLR 382
+ + + + + + P+K I+ L+ G L+ H ++ +R
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLS--------FILDLMNGGDLHYHLSQHGVFSEADMR 295
Query: 383 -----------------IIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIA 425
+++RDLK +NILLD + +ISD G+A F + +
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---- 351
Query: 426 GTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQ 468
GT+GYMAPE G + +D +S G ++ +++ G +S F Q
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG--HSPFRQ 393
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 97/222 (43%), Gaps = 46/222 (20%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKG----VLPSGRE--IAVKRLSKSSGQGAE-EFKNEVV 329
+V+ K + +LG G FG VY+G ++ E +AVK +++S+ EF NE
Sbjct: 10 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 69
Query: 330 VVAKLQHRNLVRLLG--------FCLEDPEKQGQLDWSRR-------------------- 361
V+ ++VRLLG + + G L R
Sbjct: 70 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 129
Query: 362 YKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT 421
++ IA G+ YL+ + +HRDL N ++ + KI DFGM + D + +
Sbjct: 130 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDX 182
Query: 422 SRIAG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
R G +MAPE G F+ SD++SFGV++ EI +
Sbjct: 183 XRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 97/222 (43%), Gaps = 46/222 (20%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKG----VLPSGRE--IAVKRLSKSSGQGAE-EFKNEVV 329
+V+ K + +LG G FG VY+G ++ E +AVK +++S+ EF NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 330 VVAKLQHRNLVRLLG--------FCLEDPEKQGQLDWSRR-------------------- 361
V+ ++VRLLG + + G L R
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 362 YKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT 421
++ IA G+ YL+ + +HRDL N ++ + KI DFGM + D + +
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDX 185
Query: 422 SRIAG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
R G +MAPE G F+ SD++SFGV++ EI +
Sbjct: 186 XRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
IA G+ +L II+RDLK+ N++LD+E + KI+DFGM K D T GT
Sbjct: 130 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKXFCGT 184
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
Y+APE + + D ++FGVL+ E++ G+
Sbjct: 185 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 46/236 (19%)
Query: 267 ESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYK----GVLPSG--REIAVKRLSKSSGQG 320
E L +D + ++ LG G FG+V + G+ + R +AVK L + +
Sbjct: 4 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 321 AEE-FKNEVVVVAKL-QHRNLVRLLGFCLED----------------------------P 350
+E+ ++ + H N+V LLG C + P
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 351 EKQGQLDWSRRYKIIGL-------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKI 403
K D + + + +A+G+ +L + + IHRDL NILL + KI
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 180
Query: 404 SDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
DFG+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 181 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 27 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 81
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ ++ +SR + + +I R + Y
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 142 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 195
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 196 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 46/236 (19%)
Query: 267 ESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYK----GVLPSG--REIAVKRLSKSSGQG 320
E L +D + ++ LG G FG+V + G+ + R +AVK L + +
Sbjct: 13 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72
Query: 321 AEE-FKNEVVVVAKL-QHRNLVRLLGFCLED----------------------------P 350
+E+ ++ + H N+V LLG C + P
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 351 EKQGQLDWSRRYKIIGL-------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKI 403
K D + + + +A+G+ +L + + IHRDL NILL + KI
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 189
Query: 404 SDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
DFG+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 190 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + FKN E+ ++ KL H N+VR
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKA-----FKNRELQIMRKLDHCNIVR 77
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ ++ +SR + + +I R + Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 138 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 191
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 42/229 (18%)
Query: 260 DNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKS 316
DN+ ++E F +K ++ +G+G G V Y +L R +A+K+LS+
Sbjct: 7 DNNFYSVEIGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRP 60
Query: 317 --SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK---------------------- 352
+ A+ E+V++ + H+N++ LL P+K
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVF--TPQKSLEEFQDVYIVMELMDANLSQV 118
Query: 353 -QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKI 411
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+A+
Sbjct: 119 IQMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 412 FGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
G T + T Y APE + + D++S G ++ E+I G
Sbjct: 176 AG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 42/234 (17%)
Query: 256 EGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKR 312
+ DN ++E F +K ++ +G+G G V Y VL R +A+K+
Sbjct: 2 KSKVDNQFYSVEVGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKK 55
Query: 313 LSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK------------------ 352
LS+ + A+ E+V++ + H+N++ LL P+K
Sbjct: 56 LSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELMDAN 113
Query: 353 -----QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFG 407
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 114 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 170
Query: 408 MAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
+A+ G T + T Y APE + + D++S G ++ E++ K
Sbjct: 171 LARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 32/209 (15%)
Query: 276 IKVATNKFSTDNKLGAGGFGEVYK-GVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKL 334
+++ + F ++LGAG G V+K PSG +A K + + +N+++ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL---EIKPAIRNQIIRELQV 57
Query: 335 QHR-NLVRLLGF------------CLEDPE---------KQGQLDWSRRYKIIGLIARGI 372
H N ++GF C+E + K G++ K+ + +G+
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGL 117
Query: 373 LYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMA 432
YL E + +I+HRD+K SNIL+++ K+ DFG++ +D + GT YM+
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTRSYMS 171
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
PE +SV+SD++S G+ ++E+ G+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 32/209 (15%)
Query: 276 IKVATNKFSTDNKLGAGGFGEVYK-GVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKL 334
+++ + F ++LGAG G V+K PSG +A K + + +N+++ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL---EIKPAIRNQIIRELQV 57
Query: 335 QHR-NLVRLLGF------------CLEDPE---------KQGQLDWSRRYKIIGLIARGI 372
H N ++GF C+E + K G++ K+ + +G+
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGL 117
Query: 373 LYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMA 432
YL E + +I+HRD+K SNIL+++ K+ DFG++ +D + GT YM+
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTRSYMS 171
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
PE +SV+SD++S G+ ++E+ G+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 32/209 (15%)
Query: 276 IKVATNKFSTDNKLGAGGFGEVYK-GVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKL 334
+++ + F ++LGAG G V+K PSG +A K + + +N+++ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL---EIKPAIRNQIIRELQV 57
Query: 335 QHR-NLVRLLGF------------CLEDPE---------KQGQLDWSRRYKIIGLIARGI 372
H N ++GF C+E + K G++ K+ + +G+
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGL 117
Query: 373 LYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMA 432
YL E + +I+HRD+K SNIL+++ K+ DFG++ +D + GT YM+
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTRSYMS 171
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
PE +SV+SD++S G+ ++E+ G+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 42/229 (18%)
Query: 260 DNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKS 316
DN+ ++E F +K ++ +G+G G V Y +L R +A+K+LS+
Sbjct: 7 DNNFYSVEIGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRP 60
Query: 317 --SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK---------------------- 352
+ A+ E+V++ + H+N++ LL P+K
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF--TPQKSLEEFQDVYIVMELMDANLCQV 118
Query: 353 -QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKI 411
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+A+
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 412 FGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
G T + Y Y APE + + D++S G ++ E+I G
Sbjct: 176 AGTSFMM--TPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 77
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ ++ +SR + + +I R + Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 138 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY-YRAP 191
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 42/234 (17%)
Query: 256 EGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKR 312
+ DN ++E F +K ++ +G+G G V Y VL R +A+K+
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKK 56
Query: 313 LSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK------------------ 352
LS+ + A+ E+V++ + H+N++ LL P+K
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELMDAN 114
Query: 353 -----QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFG 407
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 408 MAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
+A+ G T + T Y APE + + D++S G ++ E++ K
Sbjct: 172 LARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 33/208 (15%)
Query: 279 ATNKFSTDNK---LGAGGFGEVYK-GVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKL 334
A N F T +K LG G FG+V+K +G ++A K + + EE KNE+ V+ +L
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 335 QHRNLVRL---------LGFCLEDPEKQGQLD--WSRRYKIIGL--------IARGILYL 375
H NL++L + +E + D Y + L I GI ++
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHM 203
Query: 376 HEDSRLRIIHRDLKVSNILL---DAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMA 432
H+ + I+H DLK NIL DA+ KI DFG+A+ + + + GT ++A
Sbjct: 204 HQ---MYILHLDLKPENILCVNRDAK-QIKIIDFGLARRY---KPREKLKVNFGTPEFLA 256
Query: 433 PEYAMHGQFSVKSDVYSFGVLVLEIITG 460
PE + S +D++S GV+ +++G
Sbjct: 257 PEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + FKN E+ ++ KL H N+VR
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKA-----FKNRELQIMRKLDHCNIVR 77
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ ++ +SR + + +I R + Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 138 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY-YRAP 191
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 42/234 (17%)
Query: 256 EGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKR 312
+ DN ++E F +K ++ +G+G G V Y VL R +A+K+
Sbjct: 4 KSKVDNQFYSVEVGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKK 57
Query: 313 LSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK------------------ 352
LS+ + A+ E+V++ + H+N++ LL P+K
Sbjct: 58 LSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELMDAN 115
Query: 353 -----QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFG 407
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 116 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 172
Query: 408 MAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
+A+ G T + T Y APE + + D++S G ++ E++ K
Sbjct: 173 LARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 42/234 (17%)
Query: 256 EGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKR 312
+ DN ++E F +K ++ +G+G G V Y VL R +A+K+
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKK 56
Query: 313 LSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK------------------ 352
LS+ + A+ E+V++ + H+N++ LL P+K
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELMDAN 114
Query: 353 -----QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFG 407
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 408 MAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
+A+ G T + T Y APE + + D++S G ++ E++ K
Sbjct: 172 LARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 46/236 (19%)
Query: 267 ESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYK----GVLPSG--REIAVKRLSKSSGQG 320
E L +D + ++ LG G FG+V + G+ + R +AVK L + +
Sbjct: 4 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 321 AEE-FKNEVVVVAKL-QHRNLVRLLGFCLED----------------------------P 350
+E+ ++ + H N+V LLG C + P
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 351 EKQGQLDWSRRYKIIGL-------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKI 403
K D + + + +A+G+ +L + + IHRDL NILL + KI
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 180
Query: 404 SDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
DFG+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 181 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 42/234 (17%)
Query: 256 EGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKR 312
+ DN ++E F +K ++ +G+G G V Y VL R +A+K+
Sbjct: 4 KSKVDNQFYSVEVGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKK 57
Query: 313 LSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK------------------ 352
LS+ + A+ E+V++ + H+N++ LL P+K
Sbjct: 58 LSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELMDAN 115
Query: 353 -----QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFG 407
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 116 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 172
Query: 408 MAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
+A+ G T + T Y APE + + D++S G ++ E++ K
Sbjct: 173 LARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + FKN E+ ++ KL H N+VR
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKA-----FKNRELQIMRKLDHCNIVR 77
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ ++ +SR + + +I R + Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 138 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY-YRAP 191
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 139 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIM 190
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 194
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 43/209 (20%)
Query: 283 FSTDNKLGAGGFGEVYKGVLP-SGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRNL 339
+ + +G+G +G V + SG ++A+K+LS+ S A+ E++++ +QH N+
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 85
Query: 340 VRLLG-------------FCLEDPEKQGQLDWSRRYKIIGL-------------IARGIL 373
+ LL F L P Q L KI+GL + +G+
Sbjct: 86 IGLLDVFTPASSLRNFYDFYLVMPFMQTDLQ-----KIMGLKFSEEKIQYLVYQMLKGLK 140
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
Y+H ++HRDLK N+ ++ + KI DFG+A+ + T +R Y AP
Sbjct: 141 YIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAP 192
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E + ++ D++S G ++ E++TGK
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 42/229 (18%)
Query: 260 DNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKS 316
DN+ ++E F +K ++ +G+G G V Y +L R +A+K+LS+
Sbjct: 7 DNNFYSVEIGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRP 60
Query: 317 --SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK---------------------- 352
+ A+ E+V++ + H+N++ LL P+K
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF--TPQKSLEEFQDVYIVMELMDANLCQV 118
Query: 353 -QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKI 411
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+A+
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 412 FGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
G T + T Y APE + + D++S G ++ E+I G
Sbjct: 176 AG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 47/223 (21%)
Query: 281 NKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNEVVVV 331
+K + LG G FG+V K +AVK L ++ + + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 332 AKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL-------------- 367
+ +H+N++ LLG C +D +G L ++ R + G+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 368 -----------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQ 416
+ARG+ YL + + IHRDL N+L+ KI+DFG+A+
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 417 TQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
NT+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 46/236 (19%)
Query: 267 ESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYK----GVLPSG--REIAVKRLSKSSGQG 320
E L +D + ++ LG G FG+V + G+ + R +AVK L + +
Sbjct: 50 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 109
Query: 321 AEE-FKNEVVVVAKL-QHRNLVRLLGFCLED----------------------------P 350
+E+ ++ + H N+V LLG C + P
Sbjct: 110 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 169
Query: 351 EKQGQLDWSRRYKIIGL-------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKI 403
K D + + + +A+G+ +L + + IHRDL NILL + KI
Sbjct: 170 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 226
Query: 404 SDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
DFG+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 227 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIM 194
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 42/230 (18%)
Query: 260 DNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKS 316
DN ++E F +K ++ +G+G G V Y VL R +A+K+LS+
Sbjct: 1 DNQFYSVEVGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRP 54
Query: 317 --SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK---------------------- 352
+ A+ E+V++ + H+N++ LL P+K
Sbjct: 55 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQV 112
Query: 353 -QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKI 411
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+A+
Sbjct: 113 IQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 169
Query: 412 FGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
G T + T Y APE + + D++S G ++ E++ K
Sbjct: 170 AG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 42/229 (18%)
Query: 260 DNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKS 316
DN+ ++E F +K ++ +G+G G V Y +L R +A+K+LS+
Sbjct: 8 DNNFYSVEIGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRP 61
Query: 317 --SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK---------------------- 352
+ A+ E+V++ + H+N++ LL P+K
Sbjct: 62 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF--TPQKSLEEFQDVYIVMELMDANLCQV 119
Query: 353 -QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKI 411
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+A+
Sbjct: 120 IQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 176
Query: 412 FGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
G T + T Y APE + + D++S G ++ E+I G
Sbjct: 177 AG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIM 194
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 32/208 (15%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYK-GVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQ 335
++ + F ++LGAG G V+K PSG +A K + +N+++ ++
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVL 85
Query: 336 HR-NLVRLLGF------------CLEDPE---------KQGQLDWSRRYKIIGLIARGIL 373
H N ++GF C+E + K G++ K+ + +G+
Sbjct: 86 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 145
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YL E + +I+HRD+K SNIL+++ K+ DFG++ +D + GT YM+P
Sbjct: 146 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTRSYMSP 199
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITGK 461
E +SV+SD++S G+ ++E+ G+
Sbjct: 200 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 38/208 (18%)
Query: 282 KFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQH 336
++ +G+G G V Y VL R +A+K+LS+ + A+ E+V++ + H
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 337 RNLVRLLGFCLEDPEK-----------------------QGQLDWSRRYKIIGLIARGIL 373
+N++ LL P+K Q +LD R ++ + GI
Sbjct: 76 KNIISLLNVF--TPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIK 133
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+LH IIHRDLK SNI++ ++ KI DFG+A+ G T + T Y AP
Sbjct: 134 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 187
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITGK 461
E + + D++S G ++ E++ K
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 194
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 139 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 190
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LSK S A+ E+ ++ ++H N
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 155 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 206
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 42/229 (18%)
Query: 260 DNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKS 316
DN+ ++E F +K ++ +G+G G V Y +L R +A+K+LS+
Sbjct: 7 DNNFYSVEIGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRP 60
Query: 317 --SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK---------------------- 352
+ A+ E+V++ + H+N++ LL P+K
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF--TPQKSLEEFQDVYIVMELMDANLCQV 118
Query: 353 -QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKI 411
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+A+
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 412 FGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
G T + T Y APE + + D++S G ++ E+I G
Sbjct: 176 AG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 38/208 (18%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY- 435
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 194
Query: 436 --AMHGQFSVKSDVYSFGVLVLEIITGK 461
AMH +V D++S G ++ E++TG+
Sbjct: 195 LNAMHYNQTV--DIWSVGCIMAELLTGR 220
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 102/208 (49%), Gaps = 32/208 (15%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYK-GVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQ 335
++ + F ++LGAG G V+K PSG +A K + + +N+++ ++
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL---EIKPAIRNQIIRELQVL 77
Query: 336 HR-NLVRLLGF------------CLEDPE---------KQGQLDWSRRYKIIGLIARGIL 373
H N ++GF C+E + K G++ K+ + +G+
Sbjct: 78 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 137
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YL E + +I+HRD+K SNIL+++ K+ DFG++ +D + GT YM+P
Sbjct: 138 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTRSYMSP 191
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITGK 461
E +SV+SD++S G+ ++E+ G+
Sbjct: 192 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 42/229 (18%)
Query: 260 DNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKS 316
DN+ ++E F +K ++ +G+G G V Y +L R +A+K+LS+
Sbjct: 7 DNNFYSVEIGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRP 60
Query: 317 --SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK---------------------- 352
+ A+ E+V++ + H+N++ LL P+K
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVF--TPQKSLEEFQDVYIVMELMDANLSQV 118
Query: 353 -QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKI 411
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+A+
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 412 FGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
G T + T Y APE + + D++S G ++ E+I G
Sbjct: 176 AG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 383 IIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFS 442
++HRDLK +N+ LD + N K+ DFG+A+I D+ GT YM+PE ++
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA--KEFVGTPYYMSPEQMNRMSYN 194
Query: 443 VKSDVYSFGVLVLEI 457
KSD++S G L+ E+
Sbjct: 195 EKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 31/198 (15%)
Query: 289 LGAGGFGEVYKGVLPSGREIAV-KRLSKSSGQGAEE--FKNEVVVVAKLQHRNLVRLLGF 345
+G G +G K S +I V K L S AE+ +EV ++ +L+H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 346 CLEDPEKQGQ--LDWSRRYKIIGLIARGI---LYLHEDSRLRI----------------- 383
++ +++ + +I +G YL E+ LR+
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 384 ----IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHG 439
+HRDLK +N+ LD + N K+ DFG+A+I D + GT YM+PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA--FVGTPYYMSPEQMNRM 191
Query: 440 QFSVKSDVYSFGVLVLEI 457
++ KSD++S G L+ E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 148 SAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 199
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 194
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 149 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 200
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRNLV----- 340
+G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 341 -----------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRI 383
L+G L + K +L +I I RG+ Y+H I
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---I 156
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHG-QFS 442
IHRDLK SN+ ++ + KI DFG+A+ T + T Y APE ++ ++
Sbjct: 157 IHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYN 211
Query: 443 VKSDVYSFGVLVLEIITGK 461
D++S G ++ E++TG+
Sbjct: 212 QTVDIWSVGCIMAELLTGR 230
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Query: 306 REIAVKRLSKSSGQGA---EEFKNEVVVVAKLQHRNLVRLLGFCLEDPEKQGQLDWSRRY 362
EIAV L+KS + E ++N ++ L++ + CL PE + +
Sbjct: 77 HEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCL--PELAEMVSENDVI 134
Query: 363 KIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIFGVDQTQ 418
++I I G+ YLH+++ I+H DLK NILL + + P KI DFGM++ G
Sbjct: 135 RLIKQILEGVYYLHQNN---IVHLDLKPQNILLSS-IYPLGDIKIVDFGMSRKIG---HA 187
Query: 419 GNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
I GT Y+APE + + +D+++ G++ ++T
Sbjct: 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
I+ + YLHE II+RDLK+ N+LLD+E + K++D+GM K G+ + TS GT
Sbjct: 130 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GL-RPGDTTSXFCGT 184
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
Y+APE + D ++ GVL+ E++ G+
Sbjct: 185 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 163 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 214
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 42/229 (18%)
Query: 260 DNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKS 316
DN+ ++E F +K ++ +G+G G V Y +L R +A+K+LS+
Sbjct: 7 DNNFYSVEIGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRP 60
Query: 317 --SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK---------------------- 352
+ A+ E+V++ + H+N++ LL P+K
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF--TPQKSLEEFQDVYIVMELMDANLSQV 118
Query: 353 -QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKI 411
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+A+
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 412 FGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
G T + T Y APE + + D++S G ++ E+I G
Sbjct: 176 AG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 42/229 (18%)
Query: 260 DNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKS 316
DN+ ++E F +K ++ +G+G G V Y +L R +A+K+LS+
Sbjct: 9 DNNFYSVEIGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRP 62
Query: 317 --SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK---------------------- 352
+ A+ E+V++ + H+N++ LL P+K
Sbjct: 63 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF--TPQKSLEEFQDVYIVMELMDANLCQV 120
Query: 353 -QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKI 411
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+A+
Sbjct: 121 IQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 177
Query: 412 FGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
G T T Y APE + + D++S G ++ E+I G
Sbjct: 178 AG---TSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 42/229 (18%)
Query: 260 DNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKS 316
DN+ ++E F +K ++ +G+G G V Y +L R +A+K+LS+
Sbjct: 7 DNNFYSVEIGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRP 60
Query: 317 --SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK---------------------- 352
+ A+ E+V++ + H+N++ LL P+K
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF--TPQKSLEEFQDVYIVMELMDANLSQV 118
Query: 353 -QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKI 411
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+A+
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 412 FGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
G T + T Y APE + + D++S G ++ E+I G
Sbjct: 176 AG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 51/225 (22%)
Query: 281 NKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNEVVVV 331
+K + LG G FG+V K +AVK L ++ + + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 332 AKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL-------------- 367
+ +H+N++ LLG C +D +G L ++ R + G+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 368 -----------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVD 415
+ARG+ YL + + IHRDL N+L+ KI+DFG+A+ I +D
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 416 QTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 212 XXKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 51/225 (22%)
Query: 281 NKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNEVVVV 331
+K + LG G FG+V K +AVK L ++ + + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 332 AKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL-------------- 367
+ +H+N++ LLG C +D +G L ++ R + G+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 368 -----------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVD 415
+ARG+ YL + + IHRDL N+L+ KI+DFG+A+ I +D
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 416 QTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 212 XXKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 40/219 (18%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKG----VLPSGRE--IAVKRLSKSSGQGAE-EFKNEVV 329
+V+ K + +LG G FG VY+G ++ E +AVK +++S+ EF NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 330 VVAKLQHRNLVRLLG--------FCLEDPEKQGQLDWSRR-------------------- 361
V+ ++VRLLG + + G L R
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 362 YKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQGN 420
++ IA G+ YL+ + +HRDL N ++ + KI DFGM + I+ D +
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 189
Query: 421 TSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ +MAPE G F+ SD++SFGV++ EI +
Sbjct: 190 GKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 161
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 162 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 213
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 34/203 (16%)
Query: 283 FSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKLQHRN 338
F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 339 LVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGILYLHE 377
+V+LL F +D +K +D S I + LI +G+ + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
R++HRDLK N+L++ E K++DFG+A+ FGV + T + T Y APE +
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 176
Query: 438 HGQ-FSVKSDVYSFGVLVLEIIT 459
+ +S D++S G + E++T
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 34/210 (16%)
Query: 278 VATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAK 333
V F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKE 62
Query: 334 LQHRNLVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGI 372
L H N+V+LL F +D +K +D S I + LI +G+
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGL 120
Query: 373 LYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMA 432
+ H R++HRDLK N+L++ E K++DFG+A+ FGV + T + T Y A
Sbjct: 121 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRA 175
Query: 433 PEYAMHGQ-FSVKSDVYSFGVLVLEIITGK 461
PE + + +S D++S G + E++T +
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 43/209 (20%)
Query: 285 TDNK-LGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVR 341
TD K +G G FG VY+ L SG +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 77
Query: 342 LLGFCLEDPEKQGQL------------------DWSRRYKIIGLIA---------RGILY 374
L F EK+ + +SR + + +I R + Y
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H I HRD+K N+LLD + K+ DFG AK + + + N S I Y Y AP
Sbjct: 138 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 191
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E ++ DV+S G ++ E++ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
I+ + YLHE II+RDLK+ N+LLD+E + K++D+GM K G+ + TS GT
Sbjct: 162 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GL-RPGDTTSTFCGT 216
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
Y+APE + D ++ GVL+ E++ G+
Sbjct: 217 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 40/219 (18%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKG----VLPSGRE--IAVKRLSKSSGQGAE-EFKNEVV 329
+V+ K + +LG G FG VY+G ++ E +AVK +++S+ EF NE
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 330 VVAKLQHRNLVRLLG--------FCLEDPEKQGQLDWSRR-------------------- 361
V+ ++VRLLG + + G L R
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 131
Query: 362 YKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQGN 420
++ IA G+ YL+ + +HRDL N ++ + KI DFGM + I+ D +
Sbjct: 132 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 188
Query: 421 TSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ +MAPE G F+ SD++SFGV++ EI +
Sbjct: 189 GKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
+ RG+ YL E + +I+HRD+K SNIL+++ K+ DFG++ +D + GT
Sbjct: 123 VLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGT 176
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
YMAPE +SV+SD++S G+ ++E+ G+
Sbjct: 177 RSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 148 SAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 199
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 139 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 190
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
I+ + YLHE II+RDLK+ N+LLD+E + K++D+GM K G+ + TS GT
Sbjct: 115 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GL-RPGDTTSXFCGT 169
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
Y+APE + D ++ GVL+ E++ G+
Sbjct: 170 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 80 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 139
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 140 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 191
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGXVATRWYRAPEIM 194
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 43/209 (20%)
Query: 283 FSTDNKLGAGGFGEVYKGVLP-SGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRNL 339
+ + +G+G +G V + SG ++A+K+LS+ S A+ E++++ +QH N+
Sbjct: 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 103
Query: 340 VRLLG-------------FCLEDPEKQGQLDWSRRYKIIGL-------------IARGIL 373
+ LL F L P Q L KI+G+ + +G+
Sbjct: 104 IGLLDVFTPASSLRNFYDFYLVMPFMQTDLQ-----KIMGMEFSEEKIQYLVYQMLKGLK 158
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
Y+H ++HRDLK N+ ++ + KI DFG+A+ + T +R Y AP
Sbjct: 159 YIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAP 210
Query: 434 EYAMHG-QFSVKSDVYSFGVLVLEIITGK 461
E + ++ D++S G ++ E++TGK
Sbjct: 211 EVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 34/203 (16%)
Query: 283 FSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKLQHRN 338
F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 339 LVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGILYLHE 377
+V+LL F +D +K +D S I + LI +G+ + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
R++HRDLK N+L++ E K++DFG+A+ FGV + T + T Y APE +
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 176
Query: 438 HGQ-FSVKSDVYSFGVLVLEIIT 459
+ +S D++S G + E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 34/203 (16%)
Query: 283 FSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKLQHRN 338
F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 339 LVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGILYLHE 377
+V+LL F +D +K +D S I + LI +G+ + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
R++HRDLK N+L++ E K++DFG+A+ FGV + T + T Y APE +
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 175
Query: 438 HGQ-FSVKSDVYSFGVLVLEIIT 459
+ +S D++S G + E++T
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 38/208 (18%)
Query: 282 KFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQH 336
++ +G+G G V Y VL R +A+K+LS+ + A+ E+V++ + H
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 337 RNLVRLLGFCLEDPEK-----------------------QGQLDWSRRYKIIGLIARGIL 373
+N++ LL P+K Q +LD R ++ + GI
Sbjct: 77 KNIISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 134
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+LH IIHRDLK SNI++ ++ KI DFG+A+ G T + T Y AP
Sbjct: 135 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 188
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITGK 461
E + + D++S G ++ E++ K
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
I+ + YLHE II+RDLK+ N+LLD+E + K++D+GM K G+ + TS GT
Sbjct: 119 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GL-RPGDTTSXFCGT 173
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
Y+APE + D ++ GVL+ E++ G+
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 80
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 81 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 140
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 141 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 192
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 34/203 (16%)
Query: 283 FSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKLQHRN 338
F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 339 LVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGILYLHE 377
+V+LL F +D +K +D S I + LI +G+ + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
R++HRDLK N+L++ E K++DFG+A+ FGV + T + T Y APE +
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 176
Query: 438 HGQ-FSVKSDVYSFGVLVLEIIT 459
+ +S D++S G + E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 34/207 (16%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 60
Query: 335 QHRNLVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGIL 373
H N+V+LL F +D +K +D S I + LI +G+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ H R++HRDLK N+L++ E K++DFG+A+ FGV + T + T Y AP
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 173
Query: 434 EYAMHGQ-FSVKSDVYSFGVLVLEIIT 459
E + + +S D++S G + E++T
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 30/207 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 59
Query: 335 QHRNLVRLLG--------FCLEDPEKQGQLDWSRRYKIIGL-----------IARGILYL 375
H N+V+LL + + + Q D+ + G+ + +G+ +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
H R++HRDLK N+L++ E K++DFG+A+ FGV + T Y APE
Sbjct: 120 HSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEI 174
Query: 436 AMHGQ-FSVKSDVYSFGVLVLEIITGK 461
+ + +S D++S G + E++T +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 80 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 139
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 140 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 191
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 34/203 (16%)
Query: 283 FSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKLQHRN 338
F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 339 LVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGILYLHE 377
+V+LL F +D +K +D S I + LI +G+ + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
R++HRDLK N+L++ E K++DFG+A+ FGV + T + T Y APE +
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 175
Query: 438 HGQ-FSVKSDVYSFGVLVLEIIT 459
+ +S D++S G + E++T
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 39/202 (19%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLE 348
+G G FG+VY G I + + + + + FK EV+ + +H N+V +G C+
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 349 DP-------------------EKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLK 389
P + + LD ++ +I I +G+ YLH I+H+DLK
Sbjct: 101 PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLK 157
Query: 390 VSNILLDAEMNPK--ISDFGMAKIFGVDQTQGNTSRIA---GTYGYMAPEYAMHGQ---- 440
N+ D N K I+DFG+ I GV Q ++ G ++APE
Sbjct: 158 SKNVFYD---NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTE 214
Query: 441 -----FSVKSDVYSFGVLVLEI 457
FS SDV++ G + E+
Sbjct: 215 EDKLPFSKHSDVFALGTIWYEL 236
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 97/234 (41%), Gaps = 62/234 (26%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSGQGAEEFKNEVV 329
DFE I V LG G FG+V K L S R A+K++ + + + +EV+
Sbjct: 7 DFEEIAV----------LGQGAFGQVVKARNALDS-RYYAIKKI-RHTEEKLSTILSEVM 54
Query: 330 VVAKLQHRNLVRLLGFCLE------------------------------DPEKQGQLDWS 359
++A L H+ +VR LE D L+
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQ 114
Query: 360 RR--YKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK------- 410
R +++ I + Y+H IIHRDLK NI +D N KI DFG+AK
Sbjct: 115 RDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 411 IFGVDQ-----TQGNTSRIAGTYGYMAPEYAM-HGQFSVKSDVYSFGVLVLEII 458
I +D + N + GT Y+A E G ++ K D+YS G++ E+I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 194
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 34/203 (16%)
Query: 283 FSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKLQHRN 338
F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L H N
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 70
Query: 339 LVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGILYLHE 377
+V+LL F +D +K +D S I + LI +G+ + H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
R++HRDLK N+L++ E K++DFG+A+ FGV + T + T Y APE +
Sbjct: 129 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 183
Query: 438 HGQ-FSVKSDVYSFGVLVLEIIT 459
+ +S D++S G + E++T
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 97/234 (41%), Gaps = 62/234 (26%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSGQGAEEFKNEVV 329
DFE I V LG G FG+V K L S R A+K++ + + + +EV+
Sbjct: 7 DFEEIAV----------LGQGAFGQVVKARNALDS-RYYAIKKI-RHTEEKLSTILSEVM 54
Query: 330 VVAKLQHRNLVRLLGFCLE------------------------------DPEKQGQLDWS 359
++A L H+ +VR LE D L+
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQ 114
Query: 360 RR--YKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK------- 410
R +++ I + Y+H IIHRDLK NI +D N KI DFG+AK
Sbjct: 115 RDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 411 IFGVDQ-----TQGNTSRIAGTYGYMAPEYAM-HGQFSVKSDVYSFGVLVLEII 458
I +D + N + GT Y+A E G ++ K D+YS G++ E+I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 94 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 153
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 154 SAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 205
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 148 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 199
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 194
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 34/203 (16%)
Query: 283 FSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKLQHRN 338
F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L H N
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 70
Query: 339 LVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGILYLHE 377
+V+LL F +D +K +D S I + LI +G+ + H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
R++HRDLK N+L++ E K++DFG+A+ FGV + T + T Y APE +
Sbjct: 129 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 183
Query: 438 HGQ-FSVKSDVYSFGVLVLEIIT 459
+ +S D++S G + E++T
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 33/209 (15%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRLSKSSGQGAE---EFKNEVVVVA 332
+V + + LG G FG+V G +G ++AVK L++ + + + K E+ +
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 333 KLQHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILY 374
+H ++++L G + K G+++ ++ I + Y
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDY 126
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIA-GTYGYMAP 433
H R ++HRDLK N+LLDA MN KI+DFG++ + + G R + G+ Y AP
Sbjct: 127 CH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM----SDGEFLRTSCGSPNYAAP 179
Query: 434 EYAMHGQFSV--KSDVYSFGVLVLEIITG 460
E + G+ + D++S GV++ ++ G
Sbjct: 180 E-VISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 194
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 38/208 (18%)
Query: 282 KFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQH 336
++ +G+G G V Y VL R +A+K+LS+ + A+ E+V++ + H
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 337 RNLVRLLGFCLEDPEK-----------------------QGQLDWSRRYKIIGLIARGIL 373
+N++ LL P+K Q +LD R ++ + GI
Sbjct: 76 KNIISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 133
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+LH IIHRDLK SNI++ ++ KI DFG+A+ G T + T Y AP
Sbjct: 134 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 187
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITGK 461
E + + D++S G ++ E++ K
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 148 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 199
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 81
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 82 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 141
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 142 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 193
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 194 LNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 194
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 145 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 196
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 194
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 194
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 194
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 145 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 196
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 149 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 200
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 96/232 (41%), Gaps = 58/232 (25%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGA-EEFKNEVV 329
DFE I+ LG GGFG V++ A+KR+ + + A E+ EV
Sbjct: 6 DFEPIQC----------LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVK 55
Query: 330 VVAKLQHRNLVRLLGFCLE----------DPE-----------KQGQLDW-------SRR 361
+AKL+H +VR LE P+ K+ DW R
Sbjct: 56 ALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER 115
Query: 362 YKIIGL-----IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQ 416
+ + L IA + +LH ++HRDLK SNI + K+ DFG+ D+
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172
Query: 417 TQGNT-------SRIAGTYG---YMAPEYAMHGQFSVKSDVYSFGVLVLEII 458
+ +R G G YM+PE +S K D++S G+++ E++
Sbjct: 173 EEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 150 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 201
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 145 SAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 196
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 40/200 (20%)
Query: 289 LGAGGFGEVY--KGVLPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLG 344
+G G F +V + +L +G+E+AVK + K+ + ++ EV + L H N+V+L
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF- 79
Query: 345 FCLEDPEKQGQLDWSRRYKIIG-----LIARG-----------------ILYLHEDSRLR 382
E E + L Y G L+A G + Y H+
Sbjct: 80 ---EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF--- 133
Query: 383 IIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT-SRIAGTYGYMAPEYAMHGQF 441
I+HRDLK N+LLDA+ N KI+DFG + F T GN G Y APE ++
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEF----TFGNKLDAFCGAPPYAAPELFQGKKY 189
Query: 442 S-VKSDVYSFGVLVLEIITG 460
+ DV+S GV++ +++G
Sbjct: 190 DGPEVDVWSLGVILYTLVSG 209
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 34/203 (16%)
Query: 283 FSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKLQHRN 338
F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 339 LVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGILYLHE 377
+V+LL F +D +K +D S I + LI +G+ + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
R++HRDLK N+L++ E K++DFG+A+ FGV + T + T Y APE +
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 176
Query: 438 HGQ-FSVKSDVYSFGVLVLEIIT 459
+ +S D++S G + E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 155 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 206
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 51/225 (22%)
Query: 281 NKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNEVVVV 331
+K + LG G FG+V K +AVK L ++ + + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 332 AKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL-------------- 367
+ +H+N++ LLG C +D +G L ++ R + G+
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 368 -----------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVD 415
+ARG+ YL + + IHRDL N+L+ KI+DFG+A+ I +D
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 416 QTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 212 YYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 155 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 206
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 149 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 200
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 30/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 62
Query: 335 QHRNLVRLLG-----------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGILYL 375
H N+V+LL F D + + +D S I + LI +G+ +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
H R++HRDLK N+L++ E K++DFG+A+ FGV + T Y APE
Sbjct: 123 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEI 177
Query: 436 AMHGQ-FSVKSDVYSFGVLVLEIIT 459
+ + +S D++S G + E++T
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 149 SAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 200
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 145 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 196
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 51/225 (22%)
Query: 281 NKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNEVVVV 331
+K + LG G FG+V K +AVK L ++ + + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 332 AKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL-------------- 367
+ +H+N++ LLG C +D +G L ++ R + G+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 368 -----------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVD 415
+ARG+ YL + + IHRDL N+L+ KI+DFG+A+ I +D
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 416 QTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 212 YYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 44/215 (20%)
Query: 278 VATNKFSTDN-----KLGAGGFGEVYKGVLPSGRE------IAVKRLSKS--SGQGAE-E 323
+ T F+ D+ LG G FG VY RE +A+K L KS +G E +
Sbjct: 15 ILTRHFTIDDFEIGRPLGKGKFGNVY-----LAREKKSHFIVALKVLFKSQIEKEGVEHQ 69
Query: 324 FKNEVVVVAKLQHRNLVRLLGF------------------CLEDPEKQGQLDWSRRYKII 365
+ E+ + A L H N++RL + ++ +K D R I+
Sbjct: 70 LRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIM 129
Query: 366 GLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIA 425
+A ++Y H ++IHRD+K N+LL + KI+DFG + V +
Sbjct: 130 EELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRKTMC 182
Query: 426 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
GT Y+ PE + K D++ GVL E++ G
Sbjct: 183 GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 42/193 (21%)
Query: 303 PSGREIAVKRLSKSSGQG--AEEFKN-------EVVVVAKLQ-HRNLVRL--------LG 344
P+ +E AVK + + G AEE + EV ++ K+ H N+++L
Sbjct: 27 PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFF 86
Query: 345 FCLEDPEKQGQL-DW---------SRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNIL 394
F + D K+G+L D+ KI+ + I LH +L I+HRDLK NIL
Sbjct: 87 FLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENIL 143
Query: 395 LDAEMNPKISDFGMAKIFGVDQTQGNTSR-IAGTYGYMAPEYAM------HGQFSVKSDV 447
LD +MN K++DFG F G R + GT Y+APE H + + D+
Sbjct: 144 LDDDMNIKLTDFG----FSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 199
Query: 448 YSFGVLVLEIITG 460
+S GV++ ++ G
Sbjct: 200 WSTGVIMYTLLAG 212
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T T Y APE
Sbjct: 163 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGXVATRWYRAPEIM 214
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 161
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 162 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 213
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 94 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 153
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 154 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 205
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 32/207 (15%)
Query: 282 KFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKSSGQG-AEEFKNEVVVVAKLQHR 337
+++ + +G G +G V Y V + +A+K++S Q + E+ ++ + +H
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 101
Query: 338 NLV---------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
N++ L+G L K L + I RG+ Y+H
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH 161
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAGTYGYMAPEY 435
+ ++HRDLK SN+LL+ + KI DFG+A++ D G + T Y APE
Sbjct: 162 SAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 436 AMHGQFSVKS-DVYSFGVLVLEIITGK 461
++ + KS D++S G ++ E+++ +
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 150 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRAPEIM 201
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 150 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRAPEIM 201
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 150 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRAPEIM 201
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 163 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 214
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 42/193 (21%)
Query: 303 PSGREIAVKRLSKSSGQG--AEEFKN-------EVVVVAKLQ-HRNLVRL--------LG 344
P+ +E AVK + + G AEE + EV ++ K+ H N+++L
Sbjct: 40 PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFF 99
Query: 345 FCLEDPEKQGQL-DW---------SRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNIL 394
F + D K+G+L D+ KI+ + I LH +L I+HRDLK NIL
Sbjct: 100 FLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENIL 156
Query: 395 LDAEMNPKISDFGMAKIFGVDQTQGNTSR-IAGTYGYMAPEYAM------HGQFSVKSDV 447
LD +MN K++DFG F G R + GT Y+APE H + + D+
Sbjct: 157 LDDDMNIKLTDFG----FSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 212
Query: 448 YSFGVLVLEIITG 460
+S GV++ ++ G
Sbjct: 213 WSTGVIMYTLLAG 225
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 42/193 (21%)
Query: 303 PSGREIAVKRLSKSSGQG--AEEFKN-------EVVVVAKLQ-HRNLVRL--------LG 344
P+ +E AVK + + G AEE + EV ++ K+ H N+++L
Sbjct: 40 PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFF 99
Query: 345 FCLEDPEKQGQL-DW---------SRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNIL 394
F + D K+G+L D+ KI+ + I LH +L I+HRDLK NIL
Sbjct: 100 FLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENIL 156
Query: 395 LDAEMNPKISDFGMAKIFGVDQTQGNTSR-IAGTYGYMAPEYAM------HGQFSVKSDV 447
LD +MN K++DFG F G R + GT Y+APE H + + D+
Sbjct: 157 LDDDMNIKLTDFG----FSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 212
Query: 448 YSFGVLVLEIITG 460
+S GV++ ++ G
Sbjct: 213 WSTGVIMYTLLAG 225
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 165
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T + T Y APE
Sbjct: 166 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 217
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 218 LNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 30/203 (14%)
Query: 283 FSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKLQHRN 338
F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 339 LVRLLG--------FCLEDPEKQGQLDWSRRYKIIGL-----------IARGILYLHEDS 379
+V+LL + + + Q + + G+ + +G+ + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 121
Query: 380 RLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHG 439
R++HRDLK N+L++ E K++DFG+A+ FGV + T + T Y APE +
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGC 177
Query: 440 Q-FSVKSDVYSFGVLVLEIITGK 461
+ +S D++S G + E++T +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 51/225 (22%)
Query: 281 NKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNEVVVV 331
+K + LG G FG+V K +AVK L ++ + + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 332 AKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL-------------- 367
+ +H+N++ LLG C +D +G L ++ R + G+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 368 -----------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVD 415
+ARG+ YL + + IHRDL N+L+ KI+DFG+A+ I +D
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 416 QTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 212 YYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 165
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+A+ T T Y APE
Sbjct: 166 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGYVATRWYRAPEIM 217
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 218 LNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 51/229 (22%)
Query: 277 KVATNKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNE 327
++ ++ LG G FG+V K ++AVK L S ++ + + +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 328 VVVVAKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL---------- 367
+ ++ + +H+N++ LLG C +D +G L ++ + + GL
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNP 143
Query: 368 ---------------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-I 411
+ARG+ YL + + IHRDL N+L+ + KI+DFG+A+ I
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 412 FGVDQTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+D + T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 201 HHIDXXKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 266 LESLQFDF-EAIKVATNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAEE 323
L+ + +++ E + AT++ +LG G FGEV++ +G + AVK++ E
Sbjct: 81 LKPVDYEYREEVHWATHQL----RLGRGSFGEVHRMEDKQTGFQCAVKKVR------LEV 130
Query: 324 FK-NEVVVVAKLQHRNLVRLLGFCLEDP------------------EKQGQLDWSRRYKI 364
F+ E++ A L +V L G E P ++QG L R
Sbjct: 131 FRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYY 190
Query: 365 IGLIARGILYLHEDSRLRIIHRDLKVSNILLDAE-MNPKISDFGMAKIF---GVDQTQGN 420
+G G+ YLH SR RI+H D+K N+LL ++ + + DFG A G+ ++
Sbjct: 191 LGQALEGLEYLH--SR-RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLT 247
Query: 421 TSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
I GT +MAPE + K DV+S ++L ++ G
Sbjct: 248 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 51/225 (22%)
Query: 281 NKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNEVVVV 331
+K + LG G FG+V K +AVK L ++ + + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 332 AKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL-------------- 367
+ +H+N++ LLG C +D +G L ++ R + G+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 368 -----------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVD 415
+ARG+ YL + + IHRDL N+L+ KI+DFG+A+ I +D
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 416 QTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 212 YYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 33/209 (15%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRLSKSSGQGAE---EFKNEVVVVA 332
+V + + LG G FG+V G +G ++AVK L++ + + + K E+ +
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 333 KLQHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILY 374
+H ++++L G + K G+++ ++ I + Y
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDY 126
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIA-GTYGYMAP 433
H R ++HRDLK N+LLDA MN KI+DFG++ + + G R + G+ Y AP
Sbjct: 127 CH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM----SDGEFLRDSCGSPNYAAP 179
Query: 434 EYAMHGQFSV--KSDVYSFGVLVLEIITG 460
E + G+ + D++S GV++ ++ G
Sbjct: 180 E-VISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 51/225 (22%)
Query: 281 NKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNEVVVV 331
+K + LG G FG+V K +AVK L ++ + + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 332 AKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL-------------- 367
+ +H+N++ LLG C +D +G L ++ R + G+
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 368 -----------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVD 415
+ARG+ YL + + IHRDL N+L+ KI+DFG+A+ I +D
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 416 QTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 212 YYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 46/222 (20%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKG----VLPSGRE--IAVKRLSKSSGQGAE-EFKNEVV 329
+V+ K + +LG G FG VY+G ++ E +AVK +++S+ EF NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 330 VVAKLQHRNLVRLLG--------FCLEDPEKQGQLDWSRR-------------------- 361
V+ ++VRLLG + + G L R
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 362 YKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT 421
++ IA G+ YL+ + +HRDL N ++ + KI DFGM + D +
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETAY 185
Query: 422 SRIAG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
R G +MAPE G F+ SD++SFGV++ EI +
Sbjct: 186 YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DFG+ + T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDSELKILDFGLCR-----HTDDEMTGYVATRWYRAPEIM 194
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 42/230 (18%)
Query: 260 DNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKS 316
DN+ ++E F +K ++ +G+G G V Y +L R +A+K+LS+
Sbjct: 12 DNNFYSVEIGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRP 65
Query: 317 --SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK---------------------- 352
+ A+ E+V++ + H+N++ LL P+K
Sbjct: 66 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF--TPQKSLEEFQDVYIVMELMDANLCQV 123
Query: 353 -QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKI 411
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+A+
Sbjct: 124 IQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 180
Query: 412 FGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
G T + T Y APE + + D++S G ++ E++ K
Sbjct: 181 AG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 34/207 (16%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 59
Query: 335 QHRNLVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGIL 373
H N+V+LL F +D +K +D S I + LI +G+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ H R++HRDLK N+L++ E K++DFG+A+ FGV + T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 434 EYAMHGQ-FSVKSDVYSFGVLVLEIIT 459
E + + +S D++S G + E++T
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 42/230 (18%)
Query: 260 DNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKS 316
DN+ ++E F +K ++ +G+G G V Y +L R +A+K+LS+
Sbjct: 1 DNNFYSVEIGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRP 54
Query: 317 --SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK---------------------- 352
+ A+ E+V++ + H+N++ LL P+K
Sbjct: 55 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF--TPQKSLEEFQDVYIVMELMDANLCQV 112
Query: 353 -QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKI 411
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+A+
Sbjct: 113 IQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 169
Query: 412 FGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
G T + T Y APE + + D++S G ++ E++ K
Sbjct: 170 AG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 30/205 (14%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLS--KSSGQGAEEFKNEVVVVAKLQH 336
++ + +LG G F V + V + G E A K ++ K S + ++ + E + KLQH
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 337 RNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHED 378
N+VRL G ED + + I I I Y H +
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 123
Query: 379 SRLRIIHRDLKVSNILLDAEMN---PKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
I+HR+LK N+LL ++ K++DFG+A V+ ++ AGT GY++PE
Sbjct: 124 G---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHG-FAGTPGYLSPEV 177
Query: 436 AMHGQFSVKSDVYSFGVLVLEIITG 460
+S D+++ GV++ ++ G
Sbjct: 178 LKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 34/207 (16%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 59
Query: 335 QHRNLVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGIL 373
H N+V+LL F +D +K +D S I + LI +G+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ H R++HRDLK N+L++ E K++DFG+A+ FGV + T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 434 EYAMHGQ-FSVKSDVYSFGVLVLEIIT 459
E + + +S D++S G + E++T
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 34/207 (16%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 60
Query: 335 QHRNLVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGIL 373
H N+V+LL F +D +K +D S I + LI +G+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ H R++HRDLK N+L++ E K++DFG+A+ FGV + T Y AP
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 434 EYAMHGQ-FSVKSDVYSFGVLVLEIIT 459
E + + +S D++S G + E++T
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 30/205 (14%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLS--KSSGQGAEEFKNEVVVVAKLQH 336
++ + +LG G F V + V + G E A K ++ K S + ++ + E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 337 RNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHED 378
N+VRL G ED + + I I I Y H +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 379 SRLRIIHRDLKVSNILLDAEMN---PKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
I+HR+LK N+LL ++ K++DFG+A V+ ++ AGT GY++PE
Sbjct: 125 G---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHG-FAGTPGYLSPEV 178
Query: 436 AMHGQFSVKSDVYSFGVLVLEIITG 460
+S D+++ GV++ ++ G
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 34/207 (16%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 59
Query: 335 QHRNLVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGIL 373
H N+V+LL F +D +K +D S I + LI +G+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ H R++HRDLK N+L++ E K++DFG+A+ FGV + T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 434 EYAMHGQ-FSVKSDVYSFGVLVLEIIT 459
E + + +S D++S G + E++T
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 51/229 (22%)
Query: 277 KVATNKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNE 327
++ ++ LG G FG+V K ++AVK L S ++ + + +E
Sbjct: 9 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 68
Query: 328 VVVVAKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL---------- 367
+ ++ + +H+N++ LLG C +D +G L ++ + + GL
Sbjct: 69 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 128
Query: 368 ---------------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-I 411
+ARG+ YL + + IHRDL N+L+ + KI+DFG+A+ I
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 185
Query: 412 FGVDQTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+D + T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 186 HHIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 34/207 (16%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 59
Query: 335 QHRNLVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGIL 373
H N+V+LL F +D +K +D S I + LI +G+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ H R++HRDLK N+L++ E K++DFG+A+ FGV + T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 434 EYAMHGQ-FSVKSDVYSFGVLVLEIIT 459
E + + +S D++S G + E++T
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 34/207 (16%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 62
Query: 335 QHRNLVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGIL 373
H N+V+LL F +D +K +D S I + LI +G+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ H R++HRDLK N+L++ E K++DFG+A+ FGV + T Y AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 434 EYAMHGQ-FSVKSDVYSFGVLVLEIIT 459
E + + +S D++S G + E++T
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 34/207 (16%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 61
Query: 335 QHRNLVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGIL 373
H N+V+LL F +D +K +D S I + LI +G+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ H R++HRDLK N+L++ E K++DFG+A+ FGV + T Y AP
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 434 EYAMHGQ-FSVKSDVYSFGVLVLEIIT 459
E + + +S D++S G + E++T
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 51/225 (22%)
Query: 281 NKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNEVVVV 331
+K + LG G FG+V K +AVK L ++ + + +E+ ++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 332 AKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL-------------- 367
+ +H+N++ LLG C +D +G L ++ R + G+
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 368 -----------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVD 415
+ARG+ YL + + IHRDL N+L+ KI+DFG+A+ I +D
Sbjct: 201 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 257
Query: 416 QTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 258 YYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 34/207 (16%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 61
Query: 335 QHRNLVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGIL 373
H N+V+LL F +D +K +D S I + LI +G+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ H R++HRDLK N+L++ E K++DFG+A+ FGV + T Y AP
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 434 EYAMHGQ-FSVKSDVYSFGVLVLEIIT 459
E + + +S D++S G + E++T
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 34/207 (16%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 62
Query: 335 QHRNLVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGIL 373
H N+V+LL F +D +K +D S I + LI +G+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ H R++HRDLK N+L++ E K++DFG+A+ FGV + T Y AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 434 EYAMHGQ-FSVKSDVYSFGVLVLEIIT 459
E + + +S D++S G + E++T
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 29/199 (14%)
Query: 282 KFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRL---SKSSGQGAEEFKNEVVVVAKLQHR 337
K+ K+G G +G V+K EI A+KR+ G + + E+ ++ +L+H+
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELKHK 61
Query: 338 NLVRL-------------LGFCLEDPEK-----QGQLDWSRRYKIIGLIARGILYLHEDS 379
N+VRL FC +D +K G LD + + +G+ + H S
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH--S 119
Query: 380 RLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHG 439
R ++HRDLK N+L++ K++DFG+A+ FG+ + ++ + T Y P+
Sbjct: 120 R-NVLHRDLKPQNLLINRNGELKLADFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFGA 176
Query: 440 Q-FSVKSDVYSFGVLVLEI 457
+ +S D++S G + E+
Sbjct: 177 KLYSTSIDMWSAGCIFAEL 195
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 39/213 (18%)
Query: 279 ATNKFSTDN-----KLGAGGFGEVYKG-VLPSGREIAVKRLSKS---SGQGAEEFKNEVV 329
++N+ DN LG G FG+V V +G AVK L K E E
Sbjct: 16 SSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKR 75
Query: 330 VVAKLQHRNLVRLLGFCLEDPE-------------------KQGQLDWSRRYKIIGLIAR 370
+++ ++ + L C + P+ K + D +R I
Sbjct: 76 ILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIIS 135
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK---IFGVDQTQGNTSRIAGT 427
+++LH+ II+RDLK+ N+LLD E + K++DFGM K GV T+ GT
Sbjct: 136 ALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV-----TTATFCGT 187
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
Y+APE + D ++ GVL+ E++ G
Sbjct: 188 PDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 34/207 (16%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 61
Query: 335 QHRNLVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGIL 373
H N+V+LL F +D +K +D S I + LI +G+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ H R++HRDLK N+L++ E K++DFG+A+ FGV + T Y AP
Sbjct: 120 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 434 EYAMHGQ-FSVKSDVYSFGVLVLEIIT 459
E + + +S D++S G + E++T
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 34/207 (16%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 60
Query: 335 QHRNLVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGIL 373
H N+V+LL F +D +K +D S I + LI +G+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ H R++HRDLK N+L++ E K++DFG+A+ FGV + T Y AP
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 434 EYAMHGQ-FSVKSDVYSFGVLVLEIIT 459
E + + +S D++S G + E++T
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 34/207 (16%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 63
Query: 335 QHRNLVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGIL 373
H N+V+LL F +D +K +D S I + LI +G+
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+ H R++HRDLK N+L++ E K++DFG+A+ FGV + T Y AP
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 176
Query: 434 EYAMHGQ-FSVKSDVYSFGVLVLEIIT 459
E + + +S D++S G + E++T
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 34/203 (16%)
Query: 283 FSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKLQHRN 338
F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 339 LVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGILYLHE 377
+V+LL F +D +K +D S I + LI +G+ + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
R++HRDLK N+L++ E K++DFG+A+ FGV + T Y APE +
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 175
Query: 438 HGQ-FSVKSDVYSFGVLVLEIIT 459
+ +S D++S G + E++T
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T +AGT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 40/219 (18%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKG----VLPSGRE--IAVKRLSKSSGQGAE-EFKNEVV 329
+V+ K + +LG G FG VY+G ++ E +AVK +++S+ EF NE
Sbjct: 14 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 73
Query: 330 VVAKLQHRNLVRLLG--------FCLEDPEKQGQLDWSRR-------------------- 361
V+ ++VRLLG + + G L R
Sbjct: 74 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 133
Query: 362 YKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQGN 420
++ IA G+ YL+ + +HR+L N ++ + KI DFGM + I+ D +
Sbjct: 134 IQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 421 TSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ +MAPE G F+ SD++SFGV++ EI +
Sbjct: 191 GKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI D+G+A+ T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDCELKILDYGLAR-----HTDDEMTGYVATRWYRAPEIM 194
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 34/203 (16%)
Query: 283 FSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKLQHRN 338
F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 64
Query: 339 LVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGILYLHE 377
+V+LL F +D +K +D S I + LI +G+ + H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
R++HRDLK N+L++ E K++DFG+A+ FGV + T Y APE +
Sbjct: 123 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 177
Query: 438 HGQ-FSVKSDVYSFGVLVLEIIT 459
+ +S D++S G + E++T
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 40/219 (18%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKG----VLPSGRE--IAVKRLSKSSGQGAE-EFKNEVV 329
+V+ K + +LG G FG VY+G ++ E +AVK +++S+ EF NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 330 VVAKLQHRNLVRLLG--------FCLEDPEKQGQLDWSRR-------------------- 361
V+ ++VRLLG + + G L R
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 362 YKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVDQTQGN 420
++ IA G+ YL+ + +HR+L N ++ + KI DFGM + I+ D +
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 189
Query: 421 TSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ +MAPE G F+ SD++SFGV++ EI +
Sbjct: 190 GKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 35/157 (22%)
Query: 322 EEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK-----------QGQL-----------DWS 359
E+ E+ ++ KL H N+V+L+ L+DP + QG + D +
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVE-VLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 360 RRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIF-GVDQTQ 418
R Y + +GI YLH +IIHRD+K SN+L+ + + KI+DFG++ F G D
Sbjct: 140 RFY--FQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALL 194
Query: 419 GNTSRIAGTYGYMAPEYAMHGQ--FSVKS-DVYSFGV 452
NT GT +MAPE + FS K+ DV++ GV
Sbjct: 195 SNT---VGTPAFMAPESLSETRKIFSGKALDVWAMGV 228
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 34/203 (16%)
Query: 283 FSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKLQHRN 338
F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 339 LVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGILYLHE 377
+V+LL F +D +K +D S I + LI +G+ + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
R++HRDLK N+L++ E K++DFG+A+ FGV + T Y APE +
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 175
Query: 438 HGQ-FSVKSDVYSFGVLVLEIIT 459
+ +S D++S G + E++T
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 32/207 (15%)
Query: 282 KFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKSSGQG-AEEFKNEVVVVAKLQHR 337
+++ + +G G +G V Y V + +A+K++S Q + E+ ++ + +H
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 338 NLVRLLGFC-------LEDPEKQGQLDWSRRYKIIGL--------------IARGILYLH 376
N++ + ++D L + YK++ I RG+ Y+H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAGTYGYMAPEY 435
+ ++HRDLK SN+LL+ + KI DFG+A++ D G + T Y APE
Sbjct: 142 SAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 436 AMHGQFSVKS-DVYSFGVLVLEIITGK 461
++ + KS D++S G ++ E+++ +
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 34/210 (16%)
Query: 279 ATNKFSTD----NKLGAGGFGEVYKGVLPS-GREIAVKRLS--KSSGQGAEEFKNEVVVV 331
A+ KFS + +LG G F V + V + G E A K ++ K S + ++ + E +
Sbjct: 23 ASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 82
Query: 332 AKLQHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGIL 373
KLQH N+VRL G ED + + I I I
Sbjct: 83 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 142
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMN---PKISDFGMAKIFGVDQTQGNTSRIAGTYGY 430
Y H + I+HR+LK N+LL ++ K++DFG+A V+ ++ AGT GY
Sbjct: 143 YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHG-FAGTPGY 196
Query: 431 MAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
++PE +S D+++ GV++ ++ G
Sbjct: 197 LSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 51/225 (22%)
Query: 281 NKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNEVVVV 331
+K + LG G FG+V K +AVK L ++ + + +E+ ++
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 332 AKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL-------------- 367
+ +H+N++ LLG C +D +G L ++ R + G+
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 368 -----------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVD 415
+ARG+ YL + + IHRDL N+L+ KI+DFG+A+ I +D
Sbjct: 142 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNID 198
Query: 416 QTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 199 YYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 51/225 (22%)
Query: 281 NKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNEVVVV 331
+K + LG G FG+V K +AVK L ++ + + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 332 AKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL-------------- 367
+ +H+N++ LLG C +D +G L ++ R + G+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 368 -----------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVD 415
+ARG+ YL + + IHRDL N+L+ +I+DFG+A+ I +D
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNID 211
Query: 416 QTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 212 YYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 51/229 (22%)
Query: 277 KVATNKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNE 327
++ ++ LG G FG+V K ++AVK L S ++ + + +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 328 VVVVAKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL---------- 367
+ ++ + +H+N++ LLG C +D +G L ++ + + GL
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 143
Query: 368 ---------------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-I 411
+ARG+ YL + + IHRDL N+L+ + KI+DFG+A+ I
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 412 FGVDQTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+D + T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 201 HHIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAG 426
I RG+ Y+H + ++HRDLK SN+LL+ + KI DFG+A++ D G +
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 427 TYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITGK 461
T Y APE ++ + KS D++S G ++ E+++ +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 42/230 (18%)
Query: 260 DNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKS 316
DN+ ++E F +K ++ +G+G G V Y +L R +A+K+LS+
Sbjct: 7 DNNFYSVEIGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRP 60
Query: 317 --SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK---------------------- 352
+ A+ E+V++ + H+N++ LL P+K
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF--TPQKSLEEFQDVYIVMELMDANLCQV 118
Query: 353 -QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKI 411
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+A+
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 412 FGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
G T T Y APE + + D++S G ++ E++ K
Sbjct: 176 AG---TSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 30/205 (14%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGVLPS-GREIAVKRLS--KSSGQGAEEFKNEVVVVAKLQH 336
++ + +LG G F V + V + G E A K ++ K S + ++ + E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 337 RNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHED 378
N+VRL G ED + + I I I Y H +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 379 SRLRIIHRDLKVSNILLDAEMN---PKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
I+HR+LK N+LL ++ K++DFG+A V+ ++ AGT GY++PE
Sbjct: 125 G---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHG-FAGTPGYLSPEV 178
Query: 436 AMHGQFSVKSDVYSFGVLVLEIITG 460
+S D+++ GV++ ++ G
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 51/225 (22%)
Query: 281 NKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNEVVVV 331
+K + LG G FG+V K +AVK L ++ + + +E+ ++
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 332 AKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL-------------- 367
+ +H+N++ LLG C +D +G L ++ R + G+
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 368 -----------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVD 415
+ARG+ YL + + IHRDL N+L+ KI+DFG+A+ I +D
Sbjct: 144 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 200
Query: 416 QTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 201 YYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 51/229 (22%)
Query: 277 KVATNKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNE 327
++ ++ LG G FG+V K ++AVK L S ++ + + +E
Sbjct: 13 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 72
Query: 328 VVVVAKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL---------- 367
+ ++ + +H+N++ LLG C +D +G L ++ + + GL
Sbjct: 73 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 132
Query: 368 ---------------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-I 411
+ARG+ YL + + IHRDL N+L+ + KI+DFG+A+ I
Sbjct: 133 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 189
Query: 412 FGVDQTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+D + T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 190 HHIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 51/225 (22%)
Query: 281 NKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNEVVVV 331
+K + LG G FG+V K +AVK L ++ + + +E+ ++
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 332 AKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL-------------- 367
+ +H+N++ LLG C +D +G L ++ R + G+
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 368 -----------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-IFGVD 415
+ARG+ YL + + IHRDL N+L+ KI+DFG+A+ I +D
Sbjct: 147 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 203
Query: 416 QTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+ T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 204 YYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAG 426
I RG+ Y+H + ++HRDLK SN+LL+ + KI DFG+A++ D G +
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 427 TYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITGK 461
T Y APE ++ + KS D++S G ++ E+++ +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 30/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 62
Query: 335 QHRNLVRLLG-----------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGILYL 375
H N+V+LL F + + +D S I + LI +G+ +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
H R++HRDLK N+L++ E K++DFG+A+ FGV + T Y APE
Sbjct: 123 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEI 177
Query: 436 AMHGQ-FSVKSDVYSFGVLVLEIIT 459
+ + +S D++S G + E++T
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 30/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 62
Query: 335 QHRNLVRLLG-----------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGILYL 375
H N+V+LL F + + +D S I + LI +G+ +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
H R++HRDLK N+L++ E K++DFG+A+ FGV + T Y APE
Sbjct: 123 HSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEI 177
Query: 436 AMHGQ-FSVKSDVYSFGVLVLEIIT 459
+ + +S D++S G + E++T
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 51/229 (22%)
Query: 277 KVATNKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNE 327
++ ++ LG G FG+V K ++AVK L S ++ + + +E
Sbjct: 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 124
Query: 328 VVVVAKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL---------- 367
+ ++ + +H+N++ LLG C +D +G L ++ + + GL
Sbjct: 125 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 184
Query: 368 ---------------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-I 411
+ARG+ YL + + IHRDL N+L+ + KI+DFG+A+ I
Sbjct: 185 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 241
Query: 412 FGVDQTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+D + T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 242 HHIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIF--GVDQTQGNTSRIA 425
+ARG+ +L S + IHRDL NILL KI DFG+A+ D + +R+
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 426 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+MAPE +S KSDV+S+GVL+ EI +
Sbjct: 265 --LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 267 ESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVL------PSGREIAVKRLSKSSGQG 320
E L +D + A + LG G FG+V + P+ R +AVK L + G
Sbjct: 13 ERLPYDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKE--GAT 70
Query: 321 AEEFK---NEVVVVAKL-QHRNLVRLLGFC 346
A E+K E+ ++ + H N+V LLG C
Sbjct: 71 ASEYKALMTELKILTHIGHHLNVVNLLGAC 100
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 42/222 (18%)
Query: 266 LESLQFDF-EAIKVATNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAEE 323
L+ + +++ E + AT++ +LG G FGEV++ +G + AVK++ E
Sbjct: 62 LKPVDYEYREEVHWATHQL----RLGRGSFGEVHRMEDKQTGFQCAVKKVR------LEV 111
Query: 324 FK-NEVVVVAKLQHRNLVRLLGFCLEDP------------------EKQGQLDWSRRYKI 364
F+ E++ A L +V L G E P ++QG L R
Sbjct: 112 FRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYY 171
Query: 365 IGLIARGILYLHEDSRLRIIHRDLKVSNILLDAE-MNPKISDFGMAKIF-----GVDQTQ 418
+G G+ YLH SR RI+H D+K N+LL ++ + + DFG A G D
Sbjct: 172 LGQALEGLEYLH--SR-RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLT 228
Query: 419 GNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
G+ I GT +MAPE + K DV+S ++L ++ G
Sbjct: 229 GDY--IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 32/207 (15%)
Query: 282 KFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKSSGQG-AEEFKNEVVVVAKLQHR 337
+++ + +G G +G V Y V + +A+K++S Q + E+ ++ + +H
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 83
Query: 338 NLVRLLGFC-------LEDPEKQGQLDWSRRYKIIGL--------------IARGILYLH 376
N++ + ++D L + YK++ I RG+ Y+H
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAGTYGYMAPEY 435
+ ++HRDLK SN+LL+ + KI DFG+A++ D G + T Y APE
Sbjct: 144 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 436 AMHGQFSVKS-DVYSFGVLVLEIITGK 461
++ + KS D++S G ++ E+++ +
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 30/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 61
Query: 335 QHRNLVRLLG-----------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGILYL 375
H N+V+LL F + + +D S I + LI +G+ +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
H R++HRDLK N+L++ E K++DFG+A+ FGV + T Y APE
Sbjct: 122 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEI 176
Query: 436 AMHGQ-FSVKSDVYSFGVLVLEIIT 459
+ + +S D++S G + E++T
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 30/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 62
Query: 335 QHRNLVRLLG-----------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGILYL 375
H N+V+LL F + + +D S I + LI +G+ +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
H R++HRDLK N+L++ E K++DFG+A+ FGV + T Y APE
Sbjct: 123 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEI 177
Query: 436 AMHGQ-FSVKSDVYSFGVLVLEIIT 459
+ + +S D++S G + E++T
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 32/207 (15%)
Query: 282 KFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKSSGQG-AEEFKNEVVVVAKLQHR 337
+++ + +G G +G V Y V + +A+K++S Q + E+ ++ + +H
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 338 NLVRLLGFC-------LEDPEKQGQLDWSRRYKIIGL--------------IARGILYLH 376
N++ + ++D L + YK++ I RG+ Y+H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAGTYGYMAPEY 435
+ ++HRDLK SN+LL+ + KI DFG+A++ D G + T Y APE
Sbjct: 142 SAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 436 AMHGQFSVKS-DVYSFGVLVLEIITGK 461
++ + KS D++S G ++ E+++ +
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 51/229 (22%)
Query: 277 KVATNKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNE 327
++ ++ LG G FG+V K ++AVK L S ++ + + +E
Sbjct: 17 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 76
Query: 328 VVVVAKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL---------- 367
+ ++ + +H+N++ LLG C +D +G L ++ + + GL
Sbjct: 77 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 136
Query: 368 ---------------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-I 411
+ARG+ YL + + IHRDL N+L+ + KI+DFG+A+ I
Sbjct: 137 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 193
Query: 412 FGVDQTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+D + T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 194 HHIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 30/205 (14%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKL 334
+ F K+G G +G VYK +G +A+K++ +++ G + + E+ ++ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 60
Query: 335 QHRNLVRLLG-----------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGILYL 375
H N+V+LL F + + +D S I + LI +G+ +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
H R++HRDLK N+L++ E K++DFG+A+ FGV + T Y APE
Sbjct: 121 HSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEI 175
Query: 436 AMHGQ-FSVKSDVYSFGVLVLEIIT 459
+ + +S D++S G + E++T
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 32/207 (15%)
Query: 282 KFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKSSGQG-AEEFKNEVVVVAKLQHR 337
+++ + +G G +G V Y V + +A+K++S Q + E+ ++ + +H
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 338 NLVRLLGFC-------LEDPEKQGQLDWSRRYKIIGL--------------IARGILYLH 376
N++ + ++D L + YK++ I RG+ Y+H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAGTYGYMAPEY 435
+ ++HRDLK SN+LL+ + KI DFG+A++ D G + T Y APE
Sbjct: 142 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 436 AMHGQFSVKS-DVYSFGVLVLEIITGK 461
++ + KS D++S G ++ E+++ +
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAG 426
I RG+ Y+H + ++HRDLK SN+LL+ + KI DFG+A++ D G +
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 427 TYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITGK 461
T Y APE ++ + KS D++S G ++ E+++ +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 51/229 (22%)
Query: 277 KVATNKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNE 327
++ ++ LG G FG+V K ++AVK L S ++ + + +E
Sbjct: 16 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 75
Query: 328 VVVVAKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL---------- 367
+ ++ + +H+N++ LLG C +D +G L ++ + + GL
Sbjct: 76 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 135
Query: 368 ---------------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-I 411
+ARG+ YL + + IHRDL N+L+ + KI+DFG+A+ I
Sbjct: 136 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 192
Query: 412 FGVDQTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+D + T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 193 HHIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 39/209 (18%)
Query: 283 FSTDNKLGAGGFGEVYK------GVLPSGREIAVKRLSKSSGQGA--EEFKNEVVVVAKL 334
+ T +LG+G F V K G+ + + I KR +KSS +G E+ + EV ++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 335 QHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
QH N++ L G + ++ L + + I G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPK----ISDFGMAKIFGVDQTQGNTSR-IAGTYGYM 431
L+I H DLK NI+L PK I DFG+A GN + I GT ++
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPAFV 184
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIITG 460
APE + +++D++S GV+ +++G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 51/229 (22%)
Query: 277 KVATNKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNE 327
++ ++ LG G FG+V K ++AVK L S ++ + + +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 328 VVVVAKL-QHRNLVRLLGFCLEDPE--------KQGQL-DWSRRYKIIGL---------- 367
+ ++ + +H+N++ LLG C +D +G L ++ + + GL
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 143
Query: 368 ---------------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK-I 411
+ARG+ YL + + IHRDL N+L+ + KI+DFG+A+ I
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 412 FGVDQTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+D + T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 201 HHIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 35/231 (15%)
Query: 255 PEGNADNDLTTLESLQ-FDFEAIKVATNKFSTDNKLGAGGFGEVYK-GVLPSGREIAVKR 312
PE + + E L+ D+E + + + +LG G FGEV++ +G + AVK+
Sbjct: 46 PETEDNEGVLLTEKLKPVDYE-YREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKK 104
Query: 313 LSKSSGQGAEEFK-NEVVVVAKLQHRNLVRLLGFCLEDP------------------EKQ 353
+ E F+ E+V A L +V L G E P ++
Sbjct: 105 VR------LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM 158
Query: 354 GQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMN-PKISDFGMAKIF 412
G L R +G G+ YLH RI+H D+K N+LL ++ + + DFG A
Sbjct: 159 GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL 215
Query: 413 ---GVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
G+ ++ I GT +MAPE M K D++S ++L ++ G
Sbjct: 216 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAG 426
I RG+ Y+H + ++HRDLK SN+LL+ + KI DFG+A++ D G +
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 427 TYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITGK 461
T Y APE ++ + KS D++S G ++ E+++ +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 29/205 (14%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLS--KSSGQGAEEFKNEVVVVAKLQH 336
T+++ +G G F V + V L +G E A K ++ K S + ++ + E + L+H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 337 RNLVRL--------LGFCLEDPEKQGQL---DWSRRY-------KIIGLIARGILYLHED 378
N+VRL + + D G+L +R Y I I +L+ H+
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ- 121
Query: 379 SRLRIIHRDLKVSNILLDAEMN---PKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
+ ++HRDLK N+LL ++ K++DFG+A V Q AGT GY++PE
Sbjct: 122 --MGVVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEV 177
Query: 436 AMHGQFSVKSDVYSFGVLVLEIITG 460
+ D+++ GV++ ++ G
Sbjct: 178 LRKEAYGKPVDIWACGVILYILLVG 202
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAG 426
I RG+ Y+H + ++HRDLK SN+LL+ + KI DFG+A++ D G +
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 427 TYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITGK 461
T Y APE ++ + KS D++S G ++ E+++ +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAG 426
I RG+ Y+H + ++HRDLK SN+LL+ + KI DFG+A++ D G +
Sbjct: 131 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 427 TYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITGK 461
T Y APE ++ + KS D++S G ++ E+++ +
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAG 426
I RG+ Y+H + ++HRDLK SN+LL+ + KI DFG+A++ D G +
Sbjct: 135 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 427 TYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITGK 461
T Y APE ++ + KS D++S G ++ E+++ +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAG 426
I RG+ Y+H + ++HRDLK SN+LL+ + KI DFG+A++ D G +
Sbjct: 135 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 427 TYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITGK 461
T Y APE ++ + KS D++S G ++ E+++ +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAG 426
I RG+ Y+H + ++HRDLK SN+LL+ + KI DFG+A++ D G +
Sbjct: 138 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 427 TYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITGK 461
T Y APE ++ + KS D++S G ++ E+++ +
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAG 426
I RG+ Y+H + ++HRDLK SN+LL+ + KI DFG+A++ D G +
Sbjct: 139 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 427 TYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITGK 461
T Y APE ++ + KS D++S G ++ E+++ +
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAG 426
I RG+ Y+H + ++HRDLK SN+LL+ + KI DFG+A++ D G +
Sbjct: 130 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 427 TYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITGK 461
T Y APE ++ + KS D++S G ++ E+++ +
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAG 426
I RG+ Y+H + ++HRDLK SN+LL+ + KI DFG+A++ D G +
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 427 TYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITGK 461
T Y APE ++ + KS D++S G ++ E+++ +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAG 426
I RG+ Y+H + ++HRDLK SN+LL+ + KI DFG+A++ D G +
Sbjct: 131 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 427 TYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITGK 461
T Y APE ++ + KS D++S G ++ E+++ +
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 34/205 (16%)
Query: 283 FSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKLQHRN 338
F K+G G +G VYK +G +A+ ++ +++ G + + E+ ++ +L H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 339 LVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGILYLHE 377
+V+LL F +D +K +D S I + LI +G+ + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
R++HRDLK N+L++ E K++DFG+A+ FGV + T + T Y APE +
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 176
Query: 438 HGQ-FSVKSDVYSFGVLVLEIITGK 461
+ +S D++S G + E++T +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 34/205 (16%)
Query: 283 FSTDNKLGAGGFGEVYKGVLP-SGREIAVKRL---SKSSGQGAEEFKNEVVVVAKLQHRN 338
F K+G G +G VYK +G +A+ ++ +++ G + + E+ ++ +L H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 339 LVRLLG-------------FCLEDPEKQGQLDWSRRYKI-IGLIA-------RGILYLHE 377
+V+LL F +D +K +D S I + LI +G+ + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
R++HRDLK N+L++ E K++DFG+A+ FGV + T + T Y APE +
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 175
Query: 438 HGQ-FSVKSDVYSFGVLVLEIITGK 461
+ +S D++S G + E++T +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 32/207 (15%)
Query: 282 KFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKSSGQG-AEEFKNEVVVVAKLQHR 337
+++ + +G G +G V Y V + +A+K++S Q + E+ ++ + +H
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 89
Query: 338 NLVRLLGFC-------LEDPEKQGQLDWSRRYKIIGL--------------IARGILYLH 376
N++ + ++D L + YK++ I RG+ Y+H
Sbjct: 90 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 149
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAGTYGYMAPEY 435
+ ++HRDLK SN+LL+ + KI DFG+A++ D G + T Y APE
Sbjct: 150 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 206
Query: 436 AMHGQFSVKS-DVYSFGVLVLEIITGK 461
++ + KS D++S G ++ E+++ +
Sbjct: 207 MLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 32/207 (15%)
Query: 282 KFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKSSGQG-AEEFKNEVVVVAKLQHR 337
+++ + +G G +G V Y V + +A+K++S Q + E+ ++ + +H
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 338 NLVRLLGFC-------LEDPEKQGQLDWSRRYKIIGL--------------IARGILYLH 376
N++ + ++D L + YK++ I RG+ Y+H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAGTYGYMAPEY 435
+ ++HRDLK SN+LL+ + KI DFG+A++ D G + T Y APE
Sbjct: 142 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 436 AMHGQFSVKS-DVYSFGVLVLEIITGK 461
++ + KS D++S G ++ E+++ +
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+++D + K++DFG+AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + K++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + K++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 32/207 (15%)
Query: 282 KFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKSSGQG-AEEFKNEVVVVAKLQHR 337
+++ + +G G +G V Y V + +A+K++S Q + E+ ++ + +H
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 101
Query: 338 NLVRLLGFC-------LEDPEKQGQLDWSRRYKIIGL--------------IARGILYLH 376
N++ + ++D L + YK++ I RG+ Y+H
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 161
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAGTYGYMAPEY 435
+ ++HRDLK SN+LL+ + KI DFG+A++ D G + T Y APE
Sbjct: 162 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 436 AMHGQFSVKS-DVYSFGVLVLEIITGK 461
++ + KS D++S G ++ E+++ +
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + K++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 55/231 (23%)
Query: 277 KVATNKFSTDNKLGAGGFGEVY--------KGVLPSGREIAVKRL-SKSSGQGAEEFKNE 327
++ ++ LG G FG+V K ++AVK L S ++ + + +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 328 VVVVAKL-QHRNLVRLLGFCLED------------------------------------P 350
+ ++ + +H+N++ LLG C +D P
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNP 143
Query: 351 EKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK 410
E+Q L +ARG+ YL + + IHRDL N+L+ + KI+DFG+A+
Sbjct: 144 EEQ--LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 411 -IFGVDQTQGNTS-RIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
I +D + T+ R+ +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 199 DIHHIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
Query: 323 EFKNEVVVVAKLQHRNLVRLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLR 382
E +V +V L +L +LL K QL + I RG+ Y+H +
Sbjct: 116 EAMRDVYIVQDLMETDLYKLL--------KSQQLSNDHICYFLYQILRGLKYIHSAN--- 164
Query: 383 IIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAGTYGYMAPEYAMHGQF 441
++HRDLK SN+L++ + KI DFG+A+I + G + T Y APE ++ +
Sbjct: 165 VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKG 224
Query: 442 SVKS-DVYSFGVLVLEIITGK 461
KS D++S G ++ E+++ +
Sbjct: 225 YTKSIDIWSVGCILAEMLSNR 245
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + K++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 104/252 (41%), Gaps = 50/252 (19%)
Query: 261 NDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLP----SGREIAVKRLSKS 316
+ L + L+ E + + +F+ LG G FG V + L S ++AVK L
Sbjct: 3 DSLGISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKAD 62
Query: 317 --SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK--------------QGQLDWSR 360
+ EEF E + + H ++ +L+G L K G L
Sbjct: 63 IIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL 122
Query: 361 RYKIIGL----------------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKIS 404
IG IA G+ YL S IHRDL N +L +M ++
Sbjct: 123 LASRIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVA 179
Query: 405 DFGMA-KIFGVD-QTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT--- 459
DFG++ KI+ D QG S++ ++A E ++V SDV++FGV + EI+T
Sbjct: 180 DFGLSRKIYSGDYYRQGCASKLP--VKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQ 237
Query: 460 ----GKKNSSFY 467
G +N+ Y
Sbjct: 238 TPYAGIENAEIY 249
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 42/233 (18%)
Query: 256 EGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKR 312
+ DN ++E F +K ++ +G+G G V + VL G +AVK+
Sbjct: 3 KSKVDNQFYSVEVADSTFTVLK----RYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKK 56
Query: 313 LSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK------------------ 352
LS+ + A+ E+V++ + H+N++ LL P+K
Sbjct: 57 LSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELMDAN 114
Query: 353 -----QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFG 407
+LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 115 LCQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 408 MAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
+A+ T + T Y APE + ++ D++S G ++ E++ G
Sbjct: 172 LARTAC---TNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI DF +A+ T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDCELKILDFYLAR-----HTDDEMTGYVATRWYRAPEIM 194
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 42/230 (18%)
Query: 260 DNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEV---YKGVLPSGREIAVKRLSKS 316
DN+ ++E F +K ++ +G+G G V Y +L R +A+K+LS+
Sbjct: 7 DNNFYSVEIGDSTFTVLK----RYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRP 60
Query: 317 --SGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK---------------------- 352
+ A+ E+V++ + H+N++ LL P+K
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF--TPQKSLEEFQDVYIVMELMDANLCQV 118
Query: 353 -QGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKI 411
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+A+
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 412 FGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 461
G T T Y APE + + D++S G ++ E++ K
Sbjct: 176 AG---TSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 9/99 (9%)
Query: 363 KIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTS 422
KI I + + +LH S+L +IHRD+K SN+L++A K+ DFG++ + VD +
Sbjct: 113 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISG-YLVDDVAKDID 169
Query: 423 RIAGTYGYMAPEYA----MHGQFSVKSDVYSFGVLVLEI 457
AG YMAPE +SVKSD++S G+ ++E+
Sbjct: 170 --AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 9/99 (9%)
Query: 363 KIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTS 422
KI I + + +LH S+L +IHRD+K SN+L++A K+ DFG++ + VD
Sbjct: 157 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISG-YLVDSVAKTID 213
Query: 423 RIAGTYGYMAPEYA----MHGQFSVKSDVYSFGVLVLEI 457
AG YMAPE +SVKSD++S G+ ++E+
Sbjct: 214 --AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAG 426
I RG+ Y+H + ++HRDLK SN+LL+ + KI DFG+A++ D G
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 427 TYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITGK 461
T Y APE ++ + KS D++S G ++ E+++ +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTSRIAG 426
I RG+ Y+H + ++HRDLK SN+LL+ + KI DFG+A++ D G
Sbjct: 138 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 427 TYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITGK 461
T Y APE ++ + KS D++S G ++ E+++ +
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 29/198 (14%)
Query: 287 NKLGAGGFGEVYKGV-LPSGREIAVKRLS--KSSGQGAEEFKNEVVVVAKLQHRNLVRLL 343
+LG G F V + V + +G+E A K ++ K S + ++ + E + L+H N+VRL
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 344 GFCLEDPEKQGQLDW-----------SRRY-------KIIGLIARGILYLHEDSRLRIIH 385
E+ D +R Y I I +L+ H+ + ++H
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVVH 144
Query: 386 RDLKVSNILLDAEMN---PKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFS 442
RDLK N+LL +++ K++DFG+A V+ Q AGT GY++PE +
Sbjct: 145 RDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYG 202
Query: 443 VKSDVYSFGVLVLEIITG 460
D+++ GV++ ++ G
Sbjct: 203 KPVDLWACGVILYILLVG 220
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
I++G+ YL E ++++HRDL NIL+ KISDFG+++ + + S+
Sbjct: 159 ISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIP 215
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+MA E ++ +SDV+SFGVL+ EI+T
Sbjct: 216 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 39/209 (18%)
Query: 283 FSTDNKLGAGGFGEVYK------GVLPSGREIAVKRLSKSSGQGA--EEFKNEVVVVAKL 334
+ T +LG+G F V K G+ + + I KR +KSS +G E+ + EV ++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 335 QHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
QH N++ L G + ++ L + + I G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPK----ISDFGMAKIFGVDQTQGNTSR-IAGTYGYM 431
L+I H DLK NI+L PK I DFG+A GN + I GT ++
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIITG 460
APE + +++D++S GV+ +++G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 39/209 (18%)
Query: 283 FSTDNKLGAGGFGEVYK------GVLPSGREIAVKRLSKSSGQGA--EEFKNEVVVVAKL 334
+ T +LG+G F V K G+ + + I KR +KSS +G E+ + EV ++ ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 70
Query: 335 QHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
QH N++ L G + ++ L + + I G+ YLH
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPK----ISDFGMAKIFGVDQTQGNTSR-IAGTYGYM 431
L+I H DLK NI+L PK I DFG+A GN + I GT ++
Sbjct: 131 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 183
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIITG 460
APE + +++D++S GV+ +++G
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 39/209 (18%)
Query: 283 FSTDNKLGAGGFGEVYK------GVLPSGREIAVKRLSKSSGQGA--EEFKNEVVVVAKL 334
+ T +LG+G F V K G+ + + I KR +KSS +G E+ + EV ++ ++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 335 QHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
QH N++ L G + ++ L + + I G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPK----ISDFGMAKIFGVDQTQGNTSR-IAGTYGYM 431
L+I H DLK NI+L PK I DFG+A GN + I GT ++
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIITG 460
APE + +++D++S GV+ +++G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+++D + K++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 39/209 (18%)
Query: 283 FSTDNKLGAGGFGEVYK------GVLPSGREIAVKRLSKSSGQGA--EEFKNEVVVVAKL 334
+ T +LG+G F V K G+ + + I KR +KSS +G E+ + EV ++ ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 70
Query: 335 QHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
QH N++ L G + ++ L + + I G+ YLH
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPK----ISDFGMAKIFGVDQTQGNTSR-IAGTYGYM 431
L+I H DLK NI+L PK I DFG+A GN + I GT ++
Sbjct: 131 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 183
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIITG 460
APE + +++D++S GV+ +++G
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 39/209 (18%)
Query: 283 FSTDNKLGAGGFGEVYK------GVLPSGREIAVKRLSKSSGQGA--EEFKNEVVVVAKL 334
+ T +LG+G F V K G+ + + I KR +KSS +G E+ + EV ++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 335 QHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
QH N++ L G + ++ L + + I G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPK----ISDFGMAKIFGVDQTQGNTSR-IAGTYGYM 431
L+I H DLK NI+L PK I DFG+A GN + I GT ++
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIITG 460
APE + +++D++S GV+ +++G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 283 FSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR 341
++ +N +G G +GEV V R A K++ K + + FK E+ ++ L H N++R
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 342 LL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRI 383
L G E + S +I+ + + Y H +L +
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH---KLNV 127
Query: 384 IHRDLKVSNILL--DAEMNP-KISDFGMAKIFGVDQTQGNTSRI-AGTYGYMAPEYAMHG 439
HRDLK N L D+ +P K+ DFG+A F G R GT Y++P+ + G
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARF----KPGKMMRTKVGTPYYVSPQ-VLEG 182
Query: 440 QFSVKSDVYSFGVLVLEIITG 460
+ + D +S GV++ ++ G
Sbjct: 183 LYGPECDEWSAGVMMYVLLCG 203
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+++D + K++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+++D + K++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+++D + K++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+++D + K++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 283 FSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVR 341
++ +N +G G +GEV V R A K++ K + + FK E+ ++ L H N++R
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 342 LL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRI 383
L G E + S +I+ + + Y H +L +
Sbjct: 88 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH---KLNV 144
Query: 384 IHRDLKVSNILL--DAEMNP-KISDFGMAKIFGVDQTQGNTSRI-AGTYGYMAPEYAMHG 439
HRDLK N L D+ +P K+ DFG+A F G R GT Y++P+ + G
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARF----KPGKMMRTKVGTPYYVSPQ-VLEG 199
Query: 440 QFSVKSDVYSFGVLVLEIITG 460
+ + D +S GV++ ++ G
Sbjct: 200 LYGPECDEWSAGVMMYVLLCG 220
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+++D + K++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 39/209 (18%)
Query: 283 FSTDNKLGAGGFGEVYK------GVLPSGREIAVKRLSKSSGQGA--EEFKNEVVVVAKL 334
+ T +LG+G F V K G+ + + I KR +KSS +G E+ + EV ++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 335 QHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
QH N++ L G + ++ L + + I G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPK----ISDFGMAKIFGVDQTQGNTSR-IAGTYGYM 431
L+I H DLK NI+L PK I DFG+A GN + I GT ++
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIITG 460
APE + +++D++S GV+ +++G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 35/231 (15%)
Query: 255 PEGNADNDLTTLESLQ-FDFEAIKVATNKFSTDNKLGAGGFGEVYK-GVLPSGREIAVKR 312
PE + + E L+ D+E + + + ++G G FGEV++ +G + AVK+
Sbjct: 32 PETEDNEGVLLTEKLKPVDYE-YREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKK 90
Query: 313 LSKSSGQGAEEFK-NEVVVVAKLQHRNLVRLLGFCLEDP------------------EKQ 353
+ E F+ E+V A L +V L G E P ++
Sbjct: 91 VR------LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM 144
Query: 354 GQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMN-PKISDFGMAKIF 412
G L R +G G+ YLH RI+H D+K N+LL ++ + + DFG A
Sbjct: 145 GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL 201
Query: 413 ---GVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
G+ ++ I GT +MAPE M K D++S ++L ++ G
Sbjct: 202 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 39/209 (18%)
Query: 283 FSTDNKLGAGGFGEVYK------GVLPSGREIAVKRLSKSSGQGA--EEFKNEVVVVAKL 334
+ T +LG+G F V K G+ + + I KR +KSS +G E+ + EV ++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 335 QHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
QH N++ L G + ++ L + + I G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPK----ISDFGMAKIFGVDQTQGNTSR-IAGTYGYM 431
L+I H DLK NI+L PK I DFG+A GN + I GT ++
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIITG 460
APE + +++D++S GV+ +++G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
+A+G+ +L + + IHRDL NILL + KI DFG+A+ D
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+MAPE ++++SDV+SFGVL+ EI +
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 267 ESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYK----GVLPSG--REIAVKRLSKSSGQG 320
E L +D + ++ LG G FG+V + G+ + R +AVK L + +
Sbjct: 13 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72
Query: 321 AEE-FKNEVVVVAKL-QHRNLVRLLGFC 346
+E+ ++ + H N+V LLG C
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGAC 100
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 39/209 (18%)
Query: 283 FSTDNKLGAGGFGEVYK------GVLPSGREIAVKRLSKSSGQGA--EEFKNEVVVVAKL 334
+ T +LG+G F V K G+ + + I KR +KSS +G E+ + EV ++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 335 QHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
QH N++ L G + ++ L + + I G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPK----ISDFGMAKIFGVDQTQGNTSR-IAGTYGYM 431
L+I H DLK NI+L PK I DFG+A GN + I GT ++
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIITG 460
APE + +++D++S GV+ +++G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 38/205 (18%)
Query: 286 DNKLGAGGFGEVYKG------VLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNL 339
D ++G G F VYKG V + E+ ++L+KS Q FK E + LQH N+
Sbjct: 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQ---RFKEEAEXLKGLQHPNI 87
Query: 340 VRLLG------------FCLEDPEKQGQLD-WSRRYKIIGL---------IARGILYLHE 377
VR + + G L + +R+K+ + I +G+ +LH
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHT 147
Query: 378 DSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
+ IIHRDLK NI + KI D G+A + + + GT + APE
Sbjct: 148 RTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPE-X 201
Query: 437 MHGQFSVKSDVYSFGVLVLEIITGK 461
++ DVY+FG LE T +
Sbjct: 202 YEEKYDESVDVYAFGXCXLEXATSE 226
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 39/209 (18%)
Query: 283 FSTDNKLGAGGFGEVYK------GVLPSGREIAVKRLSKSSGQGA--EEFKNEVVVVAKL 334
+ T +LG+G F V K G+ + + I KR +KSS +G E+ + EV ++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 335 QHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
QH N++ L G + ++ L + + I G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPK----ISDFGMAKIFGVDQTQGNTSR-IAGTYGYM 431
L+I H DLK NI+L PK I DFG+A GN + I GT ++
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIITG 460
APE + +++D++S GV+ +++G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
+A+G+ +L + + IHRDL NILL + KI DFG+A+ D
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+MAPE ++++SDV+SFGVL+ EI +
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 267 ESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYK----GVLPSG--REIAVKRLSKSSGQG 320
E L +D + ++ LG G FG+V + G+ + R +AVK L + +
Sbjct: 6 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 65
Query: 321 AEE-FKNEVVVVAKL-QHRNLVRLLGFC 346
+E+ ++ + H N+V LLG C
Sbjct: 66 EHRALMSELKILIHIGHHLNVVNLLGAC 93
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
+A+G+ +L + + IHRDL NILL + KI DFG+A+ D
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+MAPE ++++SDV+SFGVL+ EI +
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 267 ESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYK----GVLPSG--REIAVKRLSKSSGQG 320
E L +D + ++ LG G FG+V + G+ + R +AVK L + +
Sbjct: 8 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 67
Query: 321 AEE-FKNEVVVVAKL-QHRNLVRLLGFC 346
+E+ ++ + H N+V LLG C
Sbjct: 68 EHRALMSELKILIHIGHHLNVVNLLGAC 95
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
I++G+ YL E ++++HRDL NIL+ KISDFG+++ + + S+
Sbjct: 159 ISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIP 215
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+MA E ++ +SDV+SFGVL+ EI+T
Sbjct: 216 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
+A+G+ +L + + IHRDL NILL + KI DFG+A+ D
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+MAPE ++++SDV+SFGVL+ EI +
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 257 GNADNDLTTL----ESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYK----GVLPSG--R 306
G D D L E L +D + ++ LG G FG+V + G+ + R
Sbjct: 1 GAMDPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCR 60
Query: 307 EIAVKRLSKSSGQGAEE-FKNEVVVVAKL-QHRNLVRLLGFC 346
+AVK L + + +E+ ++ + H N+V LLG C
Sbjct: 61 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC 102
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 29/199 (14%)
Query: 282 KFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRL---SKSSGQGAEEFKNEVVVVAKLQHR 337
K+ K+G G +G V+K EI A+KR+ G + + E+ ++ +L+H+
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELKHK 61
Query: 338 NLVRL-------------LGFCLEDPEK-----QGQLDWSRRYKIIGLIARGILYLHEDS 379
N+VRL FC +D +K G LD + + +G+ + H S
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH--S 119
Query: 380 RLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHG 439
R ++HRDLK N+L++ K+++FG+A+ FG+ + ++ + T Y P+
Sbjct: 120 R-NVLHRDLKPQNLLINRNGELKLANFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFGA 176
Query: 440 Q-FSVKSDVYSFGVLVLEI 457
+ +S D++S G + E+
Sbjct: 177 KLYSTSIDMWSAGCIFAEL 195
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI FG+A+ T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDCELKILGFGLAR-----HTDDEMTGYVATRWYRAPEIM 194
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 29/205 (14%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLS--KSSGQGAEEFKNEVVVVAKLQH 336
T+++ +LG G F V + + +P+G+E A K ++ K S + ++ + E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 337 RNLVRL--------LGFCLEDPEKQGQL---DWSRRY-------KIIGLIARGILYLHED 378
N+VRL + + D G+L +R Y I I + + H +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 379 SRLRIIHRDLKVSNILLDAEMN---PKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
I+HRDLK N+LL ++ K++DFG+A V Q AGT GY++PE
Sbjct: 123 G---IVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEV 177
Query: 436 AMHGQFSVKSDVYSFGVLVLEIITG 460
+ D+++ GV++ ++ G
Sbjct: 178 LRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 94/234 (40%), Gaps = 62/234 (26%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKG--VLPSGREIAVKRLSKSSGQGAEEFKNEVV 329
DFE I V LG G FG+V K L S R A+K++ + + + +EV
Sbjct: 7 DFEEIAV----------LGQGAFGQVVKARNALDS-RYYAIKKI-RHTEEKLSTILSEVX 54
Query: 330 VVAKLQHRNLVRLLGFCLE------------------------------DPEKQGQLDWS 359
++A L H+ +VR LE D L+
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQ 114
Query: 360 RR--YKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK------- 410
R +++ I + Y+H IIHR+LK NI +D N KI DFG+AK
Sbjct: 115 RDEYWRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 411 IFGVDQ-----TQGNTSRIAGTYGYMAPEYAM-HGQFSVKSDVYSFGVLVLEII 458
I +D + N + GT Y+A E G ++ K D YS G++ E I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 29/205 (14%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLS--KSSGQGAEEFKNEVVVVAKLQH 336
T+++ +LG G F V + + +P+G+E A K ++ K S + ++ + E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 337 RNLVRL--------LGFCLEDPEKQGQL---DWSRRY-------KIIGLIARGILYLHED 378
N+VRL + + D G+L +R Y I I + + H +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 379 SRLRIIHRDLKVSNILLDAEMN---PKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
I+HRDLK N+LL ++ K++DFG+A V Q AGT GY++PE
Sbjct: 123 G---IVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEV 177
Query: 436 AMHGQFSVKSDVYSFGVLVLEIITG 460
+ D+++ GV++ ++ G
Sbjct: 178 LRKDPYGKPVDMWACGVILYILLVG 202
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 39/209 (18%)
Query: 283 FSTDNKLGAGGFGEVYK------GVLPSGREIAVKRLSKSSGQGA--EEFKNEVVVVAKL 334
+ T +LG+G F V K G+ + + I KR +KSS +G E+ + EV ++ ++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 335 QHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
QH N++ L G + ++ L + + I G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPK----ISDFGMAKIFGVDQTQGNTSR-IAGTYGYM 431
L+I H DLK NI+L PK I DFG+A GN + I GT ++
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIITG 460
APE + +++D++S GV+ +++G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 39/209 (18%)
Query: 283 FSTDNKLGAGGFGEVYK------GVLPSGREIAVKRLSKSSGQGA--EEFKNEVVVVAKL 334
+ T +LG+G F V K G+ + + I KR +KSS +G E+ + EV ++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 335 QHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
QH N++ L G + ++ L + + I G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPK----ISDFGMAKIFGVDQTQGNTSR-IAGTYGYM 431
L+I H DLK NI+L PK I DFG+A GN + I GT ++
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIITG 460
APE + +++D++S GV+ +++G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 35/231 (15%)
Query: 255 PEGNADNDLTTLESLQ-FDFEAIKVATNKFSTDNKLGAGGFGEVYK-GVLPSGREIAVKR 312
PE + + E L+ D+E + + + ++G G FGEV++ +G + AVK+
Sbjct: 48 PETEDNEGVLLTEKLKPVDYE-YREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKK 106
Query: 313 LSKSSGQGAEEFK-NEVVVVAKLQHRNLVRLLGFCLEDP------------------EKQ 353
+ E F+ E+V A L +V L G E P ++
Sbjct: 107 VR------LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM 160
Query: 354 GQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMN-PKISDFGMAKIF 412
G L R +G G+ YLH RI+H D+K N+LL ++ + + DFG A
Sbjct: 161 GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL 217
Query: 413 ---GVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
G+ ++ I GT +MAPE M K D++S ++L ++ G
Sbjct: 218 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 39/209 (18%)
Query: 283 FSTDNKLGAGGFGEVYK------GVLPSGREIAVKRLSKSSGQGA--EEFKNEVVVVAKL 334
+ T +LG+G F V K G+ + + I KR +KSS +G E+ + EV ++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 335 QHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
QH N++ L G + ++ L + + I G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPK----ISDFGMAKIFGVDQTQGNTSR-IAGTYGYM 431
L+I H DLK NI+L PK I DFG+A GN + I GT ++
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIITG 460
APE + +++D++S GV+ +++G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI D G+A+ T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDCELKILDAGLAR-----HTDDEMTGYVATRWYRAPEIM 194
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 39/209 (18%)
Query: 283 FSTDNKLGAGGFGEVYK------GVLPSGREIAVKRLSKSSGQGA--EEFKNEVVVVAKL 334
+ T +LG+G F V K G+ + + I KR +KSS +G E+ + EV ++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 335 QHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
QH N++ L G + ++ L + + I G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPK----ISDFGMAKIFGVDQTQGNTSR-IAGTYGYM 431
L+I H DLK NI+L PK I DFG+A GN + I GT ++
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIITG 460
APE + +++D++S GV+ +++G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 143 YLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 194
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 195 EIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 151 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 202
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 203 EIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+++D + +++DFG+AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI D G+A+ T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDCELKILDRGLAR-----HTDDEMTGYVATRWYRAPEIM 194
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 107/255 (41%), Gaps = 49/255 (19%)
Query: 250 KYNAVPEGNADNDLTTLESLQFDFE-AIKVATNKFSTDNKLGAGGFGEVYK----GVLPS 304
++ V E N +N + ++ Q ++ + N+ S LGAG FG+V + G++ S
Sbjct: 8 QWKVVEEINGNNXVX-IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS 66
Query: 305 --GREIAVKRLSKSSGQGAEE-FKNEVVVVAKL-QHRNLVRLLGFC-LEDP--------- 350
+AVK L S+ E +E+ V++ L H N+V LLG C + P
Sbjct: 67 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 126
Query: 351 ---------EKQGQLDWSRRYKIIGL-----------------IARGILYLHEDSRLRII 384
K+ S+ I +A+G+ +L + I
Sbjct: 127 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CI 183
Query: 385 HRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVK 444
HRDL NILL KI DFG+A+ D +MAPE + ++ +
Sbjct: 184 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 243
Query: 445 SDVYSFGVLVLEIIT 459
SDV+S+G+ + E+ +
Sbjct: 244 SDVWSYGIFLWELFS 258
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 228
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 149 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 200
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 38/204 (18%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVRLLG--- 344
+G G FGEV++G G E+AVK S S + F+ E+ L+H N++ +
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADN 93
Query: 345 ---------FCLEDPEKQGQL-DWSRRYKII--GLI------ARGILYLHED-----SRL 381
+ + D + G L D+ RY + G+I A G+ +LH + +
Sbjct: 94 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 153
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIF--GVDQTQGNTSRIAGTYGYMAPEY---- 435
I HRDLK NIL+ I+D G+A D + GT YMAPE
Sbjct: 154 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 213
Query: 436 --AMHGQFSVKSDVYSFGVLVLEI 457
H + ++D+Y+ G++ EI
Sbjct: 214 INMKHFESFKRADIYAMGLVFWEI 237
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 36/192 (18%)
Query: 289 LGAGGFGEVYKGV-LPSGREIAVK-----RLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
LG G FG+V +G+++A+K L+KS QG E E+ + L+H ++++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 79
Query: 343 LGFCLEDPE-----------------KQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
E ++ ++ + I + Y H R +I+H
Sbjct: 80 YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVH 136
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIA-GTYGYMAPEYAMHGQFSV- 443
RDLK N+LLD +N KI+DFG++ I T GN + + G+ Y APE + G+
Sbjct: 137 RDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPE-VISGKLYAG 191
Query: 444 -KSDVYSFGVLV 454
+ DV+S GV++
Sbjct: 192 PEVDVWSCGVIL 203
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 38/204 (18%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVRLLG--- 344
+G G FGEV++G G E+AVK S S + F+ E+ L+H N++ +
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADN 68
Query: 345 ---------FCLEDPEKQGQL-DWSRRYKII--GLI------ARGILYLHED-----SRL 381
+ + D + G L D+ RY + G+I A G+ +LH + +
Sbjct: 69 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 128
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIF--GVDQTQGNTSRIAGTYGYMAPEY---- 435
I HRDLK NIL+ I+D G+A D + GT YMAPE
Sbjct: 129 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 188
Query: 436 --AMHGQFSVKSDVYSFGVLVLEI 457
H + ++D+Y+ G++ EI
Sbjct: 189 INMKHFESFKRADIYAMGLVFWEI 212
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 112/252 (44%), Gaps = 44/252 (17%)
Query: 246 KAKKKYNAVPEGNADNDLTTL--ESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVL- 302
+AKK +A P+G + ++ E D+ A K K+ + +G G V + V
Sbjct: 57 EAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHR 116
Query: 303 PSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQ---------HRNLVRLLG--------F 345
+G E AVK + ++ + + E EV + + H +++ L+ F
Sbjct: 117 ATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMF 176
Query: 346 CLEDPEKQGQL-DW---------SRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILL 395
+ D ++G+L D+ I+ + + +LH ++ I+HRDLK NILL
Sbjct: 177 LVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILL 233
Query: 396 DAEMNPKISDFGMAKIFGVDQTQGNTSR-IAGTYGYMAPEY------AMHGQFSVKSDVY 448
D M ++SDFG F G R + GT GY+APE H + + D++
Sbjct: 234 DDNMQIRLSDFG----FSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLW 289
Query: 449 SFGVLVLEIITG 460
+ GV++ ++ G
Sbjct: 290 ACGVILFTLLAG 301
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 149 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 200
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 228
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 98/223 (43%), Gaps = 44/223 (19%)
Query: 271 FDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGAEEFKN--- 326
FD E V + F +G G FG+V +++ A+K ++K E +N
Sbjct: 6 FD-ENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK 64
Query: 327 EVVVVAKLQHRNLVRLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH---------E 377
E+ ++ L+H LV L + +D E + ++ L+ G L H E
Sbjct: 65 ELQIMQGLEHPFLVNL-WYSFQDEEDM--------FMVVDLLLGGDLRYHLQQNVHFKEE 115
Query: 378 DSRL---------------RIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTS 422
+L RIIHRD+K NILLD + I+DF +A + +TQ T
Sbjct: 116 TVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP-RETQITT- 173
Query: 423 RIAGTYGYMAPEYAMHGQ---FSVKSDVYSFGVLVLEIITGKK 462
+AGT YMAPE + +S D +S GV E++ G++
Sbjct: 174 -MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 36/192 (18%)
Query: 289 LGAGGFGEVYKGV-LPSGREIAVK-----RLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
LG G FG+V +G+++A+K L+KS QG E E+ + L+H ++++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 78
Query: 343 LGFCLEDPE-----------------KQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
E ++ ++ + I + Y H R +I+H
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVH 135
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIA-GTYGYMAPEYAMHGQFSV- 443
RDLK N+LLD +N KI+DFG++ I T GN + + G+ Y APE + G+
Sbjct: 136 RDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPE-VISGKLYAG 190
Query: 444 -KSDVYSFGVLV 454
+ DV+S GV++
Sbjct: 191 PEVDVWSCGVIL 202
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 31/210 (14%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYK----GVLPSGREIAVKRLSKS----SGQGAEEFKNEV 328
K+ F LG GG+G+V++ +G+ A+K L K+ + + K E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 329 VVVAKLQHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIAR 370
++ +++H +V L+ G E++G + I+
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGY 430
+ +LH+ II+RDLK NI+L+ + + K++DFG+ K D T +T GT Y
Sbjct: 133 ALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT--FCGTIEY 187
Query: 431 MAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
MAPE M + D +S G L+ +++TG
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 38/204 (18%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVRLLG--- 344
+G G FGEV++G G E+AVK S S + F+ E+ L+H N++ +
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADN 67
Query: 345 ---------FCLEDPEKQGQL-DWSRRYKII--GLI------ARGILYLHED-----SRL 381
+ + D + G L D+ RY + G+I A G+ +LH + +
Sbjct: 68 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 127
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIF--GVDQTQGNTSRIAGTYGYMAPEY---- 435
I HRDLK NIL+ I+D G+A D + GT YMAPE
Sbjct: 128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 187
Query: 436 --AMHGQFSVKSDVYSFGVLVLEI 457
H + ++D+Y+ G++ EI
Sbjct: 188 INMKHFESFKRADIYAMGLVFWEI 211
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAP 208
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 38/204 (18%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVRLLG--- 344
+G G FGEV++G G E+AVK S S + F+ E+ L+H N++ +
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADN 106
Query: 345 ---------FCLEDPEKQGQL-DWSRRYKII--GLI------ARGILYLHED-----SRL 381
+ + D + G L D+ RY + G+I A G+ +LH + +
Sbjct: 107 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 166
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMA--KIFGVDQTQGNTSRIAGTYGYMAPEY---- 435
I HRDLK NIL+ I+D G+A D + GT YMAPE
Sbjct: 167 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 226
Query: 436 --AMHGQFSVKSDVYSFGVLVLEI 457
H + ++D+Y+ G++ EI
Sbjct: 227 INMKHFESFKRADIYAMGLVFWEI 250
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 38/204 (18%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVRLLG--- 344
+G G FGEV++G G E+AVK S S + F+ E+ L+H N++ +
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADN 73
Query: 345 ---------FCLEDPEKQGQL-DWSRRYKII--GLI------ARGILYLHED-----SRL 381
+ + D + G L D+ RY + G+I A G+ +LH + +
Sbjct: 74 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 133
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIF--GVDQTQGNTSRIAGTYGYMAPEY---- 435
I HRDLK NIL+ I+D G+A D + GT YMAPE
Sbjct: 134 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 193
Query: 436 --AMHGQFSVKSDVYSFGVLVLEI 457
H + ++D+Y+ G++ EI
Sbjct: 194 INMKHFESFKRADIYAMGLVFWEI 217
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 36/192 (18%)
Query: 289 LGAGGFGEVYKGV-LPSGREIAVK-----RLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
LG G FG+V +G+++A+K L+KS QG E E+ + L+H ++++L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 69
Query: 343 LGFCLEDPE-----------------KQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
E ++ ++ + I + Y H R +I+H
Sbjct: 70 YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVH 126
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIA-GTYGYMAPEYAMHGQFSV- 443
RDLK N+LLD +N KI+DFG++ I T GN + + G+ Y APE + G+
Sbjct: 127 RDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPE-VISGKLYAG 181
Query: 444 -KSDVYSFGVLV 454
+ DV+S GV++
Sbjct: 182 PEVDVWSCGVIL 193
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
I++G+ YL E S ++HRDL NIL+ KISDFG+++ + + S+
Sbjct: 159 ISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIP 215
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+MA E ++ +SDV+SFGVL+ EI+T
Sbjct: 216 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 44/222 (19%)
Query: 273 FEAIKVATNKFSTDNK------LGAGGFGEV---YKGVLPSGREIAVKRLSKS--SGQGA 321
F +++VA + F+ + +G+G G V + VL G +AVK+LS+ + A
Sbjct: 8 FYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHA 65
Query: 322 EEFKNEVVVVAKLQHRNLVRLLGFCLEDPEK-----------------------QGQLDW 358
+ E+V++ + H+N++ LL P+K +LD
Sbjct: 66 KRAYRELVLLKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQVIHMELDH 123
Query: 359 SRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ 418
R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+A+ T
Sbjct: 124 ERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTN 177
Query: 419 GNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
+ T Y APE + + D++S G ++ E++ G
Sbjct: 178 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 34/206 (16%)
Query: 282 KFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRN 338
++ + +G+G +G V +G +AVK+LS+ S A+ E+ ++ ++H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 339 LV----------------------RLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLH 376
++ L+G L + K +L +I I RG+ Y+H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 377 EDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRDLK SN+ ++ + KI D G+A+ T + T Y APE
Sbjct: 143 SAD---IIHRDLKPSNLAVNEDCELKILDGGLAR-----HTDDEMTGYVATRWYRAPEIM 194
Query: 437 MHG-QFSVKSDVYSFGVLVLEIITGK 461
++ ++ D++S G ++ E++TG+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 142 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAP 193
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 194 EIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 41/203 (20%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVRLLGFCL 347
+G G FG V++ L E+A+K++ + + FKN E+ ++ ++H N+V L F
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 348 EDPEKQGQ------LDW--------SRRYK---------IIGL----IARGILYLHEDSR 380
+ +K+ + L++ SR Y +I L + R + Y+H
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS--- 159
Query: 381 LRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHG 439
+ I HRD+K N+LLD K+ DFG AKI + N S I Y Y APE
Sbjct: 160 IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP--NVSXICSRY-YRAPELIFGA 216
Query: 440 -QFSVKSDVYSFGVLVLEIITGK 461
++ D++S G ++ E++ G+
Sbjct: 217 TNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 40/205 (19%)
Query: 283 FSTDNKLGAGGFGEVY----KGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRN 338
F +++LG G VY KG + + A+K L K+ + + E+ V+ +L H N
Sbjct: 55 FEVESELGRGATSIVYRCKQKG---TQKPYALKVLKKTVDKKI--VRTEIGVLLRLSHPN 109
Query: 339 LVRL---------LGFCLEDPEKQGQLD-------WSRR--YKIIGLIARGILYLHEDSR 380
+++L + LE D +S R + I + YLHE+
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENG- 168
Query: 381 LRIIHRDLKVSNILL-----DAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
I+HRDLK N+L DA + KI+DFG++KI + Q + GT GY APE
Sbjct: 169 --IVHRDLKPENLLYATPAPDAPL--KIADFGLSKIV---EHQVLMKTVCGTPGYCAPEI 221
Query: 436 AMHGQFSVKSDVYSFGVLVLEIITG 460
+ + D++S G++ ++ G
Sbjct: 222 LRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 38/204 (18%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVRLLG--- 344
+G G FGEV++G G E+AVK S S + F+ E+ L+H N++ +
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADN 70
Query: 345 ---------FCLEDPEKQGQL-DWSRRYKII--GLI------ARGILYLHED-----SRL 381
+ + D + G L D+ RY + G+I A G+ +LH + +
Sbjct: 71 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 130
Query: 382 RIIHRDLKVSNILLDAEMNPKISDFGMAKIF--GVDQTQGNTSRIAGTYGYMAPEY---- 435
I HRDLK NIL+ I+D G+A D + GT YMAPE
Sbjct: 131 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 190
Query: 436 --AMHGQFSVKSDVYSFGVLVLEI 457
H + ++D+Y+ G++ EI
Sbjct: 191 INMKHFESFKRADIYAMGLVFWEI 214
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKR-LSKSSGQGAE-EFKNEVVVVAKLQH 336
+K+ K+G G FGEV+K +G+++A+K+ L ++ +G E+ ++ L+H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 337 RNLVRLLGFCLEDPEKQG--------------------------QLDWSRRYKIIGLIAR 370
N+V L+ C + S +++ ++
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 136
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGV---DQTQGNTSRIAGT 427
G+ Y+H R +I+HRD+K +N+L+ + K++DFG+A+ F + Q +R+ T
Sbjct: 137 GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 192
Query: 428 YGYMAPEYAM-HGQFSVKSDVYSFGVLVLEIIT 459
Y PE + + D++ G ++ E+ T
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 36/192 (18%)
Query: 289 LGAGGFGEVYKGV-LPSGREIAVK-----RLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
LG G FG+V +G+++A+K L+KS QG E E+ + L+H ++++L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 73
Query: 343 LGFCLEDPE-----------------KQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
E ++ ++ + I + Y H R +I+H
Sbjct: 74 YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVH 130
Query: 386 RDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIA-GTYGYMAPEYAMHGQFSV- 443
RDLK N+LLD +N KI+DFG++ I T GN + + G+ Y APE + G+
Sbjct: 131 RDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPE-VISGKLYAG 185
Query: 444 -KSDVYSFGVLV 454
+ DV+S GV++
Sbjct: 186 PEVDVWSCGVIL 197
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYK----GVLPSGREIAVKRLSKS----SGQGAEEFKNEV 328
K+ F LG GG+G+V++ +G+ A+K L K+ + + K E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 329 VVVAKLQHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIAR 370
++ +++H +V L+ G E++G + I+
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGY 430
+ +LH+ II+RDLK NI+L+ + + K++DFG+ K D T T GT Y
Sbjct: 133 ALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV--THXFCGTIEY 187
Query: 431 MAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
MAPE M + D +S G L+ +++TG
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 106/255 (41%), Gaps = 49/255 (19%)
Query: 250 KYNAVPEGNADNDLTTLESLQFDFE-AIKVATNKFSTDNKLGAGGFGEVYK----GVLPS 304
++ V E N +N ++ Q ++ + N+ S LGAG FG+V + G++ S
Sbjct: 15 QWKVVEEINGNN-YVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS 73
Query: 305 --GREIAVKRLSKSSGQGAEE-FKNEVVVVAKL-QHRNLVRLLGFC-LEDP--------- 350
+AVK L S+ E +E+ V++ L H N+V LLG C + P
Sbjct: 74 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 133
Query: 351 ---------EKQGQLDWSRRYKIIGL-----------------IARGILYLHEDSRLRII 384
K+ S+ I +A+G+ +L + I
Sbjct: 134 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CI 190
Query: 385 HRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVK 444
HRDL NILL KI DFG+A+ D +MAPE + ++ +
Sbjct: 191 HRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 250
Query: 445 SDVYSFGVLVLEIIT 459
SDV+S+G+ + E+ +
Sbjct: 251 SDVWSYGIFLWELFS 265
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+++D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTPEYLAP 228
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 106/255 (41%), Gaps = 49/255 (19%)
Query: 250 KYNAVPEGNADNDLTTLESLQFDFE-AIKVATNKFSTDNKLGAGGFGEVYK----GVLPS 304
++ V E N +N ++ Q ++ + N+ S LGAG FG+V + G++ S
Sbjct: 10 QWKVVEEINGNN-YVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS 68
Query: 305 --GREIAVKRLSKSSGQGAEE-FKNEVVVVAKL-QHRNLVRLLGFC-LEDP--------- 350
+AVK L S+ E +E+ V++ L H N+V LLG C + P
Sbjct: 69 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 128
Query: 351 ---------EKQGQLDWSRRYKIIGL-----------------IARGILYLHEDSRLRII 384
K+ S+ I +A+G+ +L + I
Sbjct: 129 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CI 185
Query: 385 HRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVK 444
HRDL NILL KI DFG+A+ D +MAPE + ++ +
Sbjct: 186 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 245
Query: 445 SDVYSFGVLVLEIIT 459
SDV+S+G+ + E+ +
Sbjct: 246 SDVWSYGIFLWELFS 260
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 106/255 (41%), Gaps = 49/255 (19%)
Query: 250 KYNAVPEGNADNDLTTLESLQFDFE-AIKVATNKFSTDNKLGAGGFGEVYK----GVLPS 304
++ V E N +N ++ Q ++ + N+ S LGAG FG+V + G++ S
Sbjct: 15 QWKVVEEINGNN-YVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS 73
Query: 305 --GREIAVKRLSKSSGQGAEE-FKNEVVVVAKL-QHRNLVRLLGFC-LEDP--------- 350
+AVK L S+ E +E+ V++ L H N+V LLG C + P
Sbjct: 74 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 133
Query: 351 ---------EKQGQLDWSRRYKIIGL-----------------IARGILYLHEDSRLRII 384
K+ S+ I +A+G+ +L + I
Sbjct: 134 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CI 190
Query: 385 HRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVK 444
HRDL NILL KI DFG+A+ D +MAPE + ++ +
Sbjct: 191 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 250
Query: 445 SDVYSFGVLVLEIIT 459
SDV+S+G+ + E+ +
Sbjct: 251 SDVWSYGIFLWELFS 265
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+++D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ ++ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 29/205 (14%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLS--KSSGQGAEEFKNEVVVVAKLQH 336
T ++ +LG G F V + V + +G+E A ++ K S + ++ + E + L+H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 337 RNLVRLLGFCLEDPEKQGQLDW-----------SRRY-------KIIGLIARGILYLHED 378
N+VRL E+ D +R Y I I +L+ H+
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ- 128
Query: 379 SRLRIIHRDLKVSNILLDAEMN---PKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
+ ++HR+LK N+LL +++ K++DFG+A V+ Q AGT GY++PE
Sbjct: 129 --MGVVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEV 184
Query: 436 AMHGQFSVKSDVYSFGVLVLEIITG 460
+ D+++ GV++ ++ G
Sbjct: 185 LRKDPYGKPVDLWACGVILYILLVG 209
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 34/199 (17%)
Query: 289 LGAGGFGEVYKGVL-PSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLLGF 345
+G+G +G V V +G ++A+K+L + S A+ E+ ++ ++H N++ LL
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 346 CLEDPE----------------------KQGQLDWSRRYKIIGLIARGILYLHEDSRLRI 383
D K +L R ++ + +G+ Y+H I
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG---I 149
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHG-QFS 442
IHRDLK N+ ++ + KI DFG+A+ Q T Y APE ++ +++
Sbjct: 150 IHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYRAPEVILNWMRYT 204
Query: 443 VKSDVYSFGVLVLEIITGK 461
D++S G ++ E+ITGK
Sbjct: 205 QTVDIWSVGCIMAEMITGK 223
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 280 TNKFSTDNKLGAGGFGEVYKG-VLPSGREIAVKR-LSKSSGQGAE-EFKNEVVVVAKLQH 336
+K+ K+G G FGEV+K +G+++A+K+ L ++ +G E+ ++ L+H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 337 RNLVRLLGFCLEDPEKQG--------------------------QLDWSRRYKIIGLIAR 370
N+V L+ C + S +++ ++
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 136
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGV---DQTQGNTSRIAGT 427
G+ Y+H R +I+HRD+K +N+L+ + K++DFG+A+ F + Q +R+ T
Sbjct: 137 GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 192
Query: 428 YGYMAPEYAM-HGQFSVKSDVYSFGVLVLEIIT 459
Y PE + + D++ G ++ E+ T
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 93/223 (41%), Gaps = 47/223 (21%)
Query: 281 NKFSTDNKLGAGGFGEVYK----GVLPS--GREIAVKRLSKSSGQGAEE-FKNEVVVVAK 333
N+ S LGAG FG+V + G++ S +AVK L S+ E +E+ V++
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 334 L-QHRNLVRLLGFC-LEDP------------------EKQGQLDWSRRYKIIGL------ 367
L H N+V LLG C + P K+ S+ I
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 368 -----------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQ 416
+A+G+ +L + IHRDL NILL KI DFG+A+ D
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199
Query: 417 TQGNTSRIAGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 459
+MAPE + ++ +SDV+S+G+ + E+ +
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 280 TNKFSTDNKLGAGGFGEVYKG-VLPSGREIAVKR-LSKSSGQGAE-EFKNEVVVVAKLQH 336
+K+ K+G G FGEV+K +G+++A+K+ L ++ +G E+ ++ L+H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 337 RNLVRLLGFCLEDPEKQG--------------------------QLDWSRRYKIIGLIAR 370
N+V L+ C + S +++ ++
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 135
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGV---DQTQGNTSRIAGT 427
G+ Y+H R +I+HRD+K +N+L+ + K++DFG+A+ F + Q +R+ T
Sbjct: 136 GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 191
Query: 428 YGYMAPEYAM-HGQFSVKSDVYSFGVLVLEIIT 459
Y PE + + D++ G ++ E+ T
Sbjct: 192 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 48/205 (23%)
Query: 289 LGAGGFGEV-----YKGVLPSGREIAVKRLSKSSGQGAE---EFKNEVVVVAKLQHRNLV 340
LG G FG+V YK + +++A+K +S+ + ++ + E+ + L+H +++
Sbjct: 17 LGEGSFGKVKLATHYK----TQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 341 RL---------------------LGFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDS 379
+L + +E +K+ D RR+ I I Y H
Sbjct: 73 KLYDVITTPTDIVMVIEYAGGELFDYIVE--KKRMTEDEGRRF--FQQIICAIEYCH--- 125
Query: 380 RLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIA-GTYGYMAPEYAMH 438
R +I+HRDLK N+LLD +N KI+DFG++ I T GN + + G+ Y APE ++
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPE-VIN 180
Query: 439 GQFSV--KSDVYSFGVLVLEIITGK 461
G+ + DV+S G+++ ++ G+
Sbjct: 181 GKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 280 TNKFSTDNKLGAGGFGEVYKG-VLPSGREIAVKR-LSKSSGQGAE-EFKNEVVVVAKLQH 336
+K+ K+G G FGEV+K +G+++A+K+ L ++ +G E+ ++ L+H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 337 RNLVRLLGFCLEDPEKQG--------------------------QLDWSRRYKIIGLIAR 370
N+V L+ C + S +++ ++
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 136
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGV---DQTQGNTSRIAGT 427
G+ Y+H R +I+HRD+K +N+L+ + K++DFG+A+ F + Q +R+ T
Sbjct: 137 GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 192
Query: 428 YGYMAPEYAM-HGQFSVKSDVYSFGVLVLEIIT 459
Y PE + + D++ G ++ E+ T
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 101/230 (43%), Gaps = 45/230 (19%)
Query: 263 LTTLESLQFD--FEAIKVATNKFSTDNKLGAGGFGEVYKG-VLPSGREIAVKRLSKSSGQ 319
+ T E+L F E +V + +LG G +G V K +PSG+ AVKR+ +
Sbjct: 14 IPTTENLYFQGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNS 73
Query: 320 --------------------------GAEEFKNEVVVVAKLQHRNLVRLLGFCLEDPEKQ 353
GA + +V + +L +L + ++ +
Sbjct: 74 QEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVID----K 129
Query: 354 GQLDWSRRYKIIGLIARGILYL--HEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKI 411
GQ + I+G IA I+ H S+L +IHRD+K SN+L++A K DFG++
Sbjct: 130 GQ---TIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISG- 185
Query: 412 FGVDQTQGNTSRIAGTYGYMAPEYA----MHGQFSVKSDVYSFGVLVLEI 457
+ VD + AG Y APE +SVKSD++S G+ +E+
Sbjct: 186 YLVDDVAKDID--AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 29/203 (14%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNL 339
++++ +GAG FG E+ + + + E K E++ L+H N+
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNI 77
Query: 340 VRLLGFCLEDPEKQGQLDWSR-------------------RYKIIGLIARGILYLHEDSR 380
VR L ++++ R+ LI+ G+ Y H
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-GVSYAHA--- 133
Query: 381 LRIIHRDLKVSNILLDAEMNP--KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMH 438
+++ HRDLK+ N LLD P KI+DFG +K V +Q ++ GT Y+APE +
Sbjct: 134 MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA-SVLHSQPKSA--VGTPAYIAPEVLLK 190
Query: 439 GQFSVK-SDVYSFGVLVLEIITG 460
++ K +DV+S GV + ++ G
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 40/205 (19%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLE 348
+G G +GEV++G G +AVK S S + + + E+ L+H N++ + +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFS-SRDEKSWFRETELYNTVMLRHENILGFIASDMT 102
Query: 349 DPEKQGQLDWSRRY---------------------KIIGLIARGILYLHED-----SRLR 382
QL Y +I+ IA G+ +LH + +
Sbjct: 103 SRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA 162
Query: 383 IIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ---GNTSRIAGTYGYMAPEYAMHG 439
I HRDLK NIL+ I+D G+A + Q GN R+ GT YMAPE +
Sbjct: 163 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPE-VLDE 220
Query: 440 QFSV-------KSDVYSFGVLVLEI 457
V + D+++FG+++ E+
Sbjct: 221 TIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
+ ++ D ++ GVL+ E+ G
Sbjct: 208 AIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 40/202 (19%)
Query: 289 LGAGGFGEV---YKGVLPSGREIAVKRLSKS--SGQGAEEFKNEVVVVAKLQHRNLVRLL 343
+G+G +G V Y L +++AVK+LS+ S A E+ ++ L+H N++ LL
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 344 GF-----CLEDPEK------------------QGQLDWSRRYKIIGLIARGILYLHEDSR 380
+ED + Q D ++ + L+ RG+ Y+H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL-RGLKYIHSAG- 143
Query: 381 LRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHG- 439
IIHRDLK SN+ ++ + +I DFG+A+ Q + T Y APE ++
Sbjct: 144 --IIHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEMTGYVATRWYRAPEIMLNWM 196
Query: 440 QFSVKSDVYSFGVLVLEIITGK 461
++ D++S G ++ E++ GK
Sbjct: 197 HYNQTVDIWSVGCIMAELLQGK 218
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 40/205 (19%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLE 348
+G G +GEV++G G +AVK S S + + + E+ L+H N++ + +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFS-SRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 349 DPEKQGQLDWSRRY---------------------KIIGLIARGILYLHED-----SRLR 382
QL Y +I+ IA G+ +LH + +
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA 133
Query: 383 IIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ---GNTSRIAGTYGYMAPEYAMHG 439
I HRDLK NIL+ I+D G+A + Q GN R+ GT YMAPE +
Sbjct: 134 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPE-VLDE 191
Query: 440 QFSV-------KSDVYSFGVLVLEI 457
V + D+++FG+++ E+
Sbjct: 192 TIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 40/202 (19%)
Query: 289 LGAGGFGEV---YKGVLPSGREIAVKRLSK--SSGQGAEEFKNEVVVVAKLQHRNLVRLL 343
+G+G +G V Y L +++AVK+LS+ S A E+ ++ L+H N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 344 GF-----CLED------------------PEKQGQLDWSRRYKIIGLIARGILYLHEDSR 380
+ED + Q D ++ + L+ RG+ Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLL-RGLKYIHSAG- 151
Query: 381 LRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHG- 439
IIHRDLK SN+ ++ + +I DFG+A+ Q + T Y APE ++
Sbjct: 152 --IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEIMLNWM 204
Query: 440 QFSVKSDVYSFGVLVLEIITGK 461
++ D++S G ++ E++ GK
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGK 226
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 40/205 (19%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLE 348
+G G +GEV++G G +AVK S S + + + E+ L+H N++ + +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFS-SRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 349 DPEKQGQLDWSRRY---------------------KIIGLIARGILYLHED-----SRLR 382
QL Y +I+ IA G+ +LH + +
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA 133
Query: 383 IIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ---GNTSRIAGTYGYMAPEYAMHG 439
I HRDLK NIL+ I+D G+A + Q GN R+ GT YMAPE +
Sbjct: 134 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPE-VLDE 191
Query: 440 QFSV-------KSDVYSFGVLVLEI 457
V + D+++FG+++ E+
Sbjct: 192 TIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 21/181 (11%)
Query: 273 FEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVK--RLSKSSGQGAEEFKNEVV 329
F+++ V +S ++G+GG +V++ VL ++I A+K L ++ Q + ++NE+
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 78
Query: 330 VVAKLQHRN--LVRLLGFCLEDP-----EKQGQLD---WSRRYKIIGLIARGILY----- 374
+ KLQ + ++RL + + D + G +D W ++ K I R +
Sbjct: 79 YLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLE 138
Query: 375 -LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H + I+H DLK +N L+ M K+ DFG+A D T GT YM P
Sbjct: 139 AVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 197
Query: 434 E 434
E
Sbjct: 198 E 198
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 29/205 (14%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGVLPSG-REIAVKRLS--KSSGQGAEEFKNEVVVVAKLQH 336
T+ + +LG G F V + V + +E A K ++ K S + ++ + E + L+H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 337 RNLVRL--------LGFCLEDPEKQGQL---DWSRRY-------KIIGLIARGILYLHED 378
N+VRL + + D G+L +R Y I I + ++H+
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQH 149
Query: 379 SRLRIIHRDLKVSNILLDAEMN---PKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEY 435
I+HRDLK N+LL ++ K++DFG+A V Q AGT GY++PE
Sbjct: 150 D---IVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQAWFGFAGTPGYLSPEV 204
Query: 436 AMHGQFSVKSDVYSFGVLVLEIITG 460
+ D+++ GV++ ++ G
Sbjct: 205 LRKDPYGKPVDIWACGVILYILLVG 229
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 27/205 (13%)
Query: 279 ATNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAEE--FKNEVVVVAKLQ 335
+ K+ +G G +G V K +GR +A+K+ +S + E+ ++ +L+
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 336 HRNLVRLLGFC-----------------LEDPEK-QGQLDWSRRYKIIGLIARGILYLHE 377
H NLV LL C L+D E LD+ K + I GI + H
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHS 142
Query: 378 DSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
+ IIHRD+K NIL+ K+ DFG A+ + T Y APE +
Sbjct: 143 HN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE--VATRWYRAPELLV 197
Query: 438 HG-QFSVKSDVYSFGVLVLEIITGK 461
++ DV++ G LV E+ G+
Sbjct: 198 GDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 40/202 (19%)
Query: 289 LGAGGFGEV---YKGVLPSGREIAVKRLSK--SSGQGAEEFKNEVVVVAKLQHRNLVRLL 343
+G+G +G V Y L +++AVK+LS+ S A E+ ++ L+H N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 344 GF-----CLEDPEK------------------QGQLDWSRRYKIIGLIARGILYLHEDSR 380
+ED + Q D ++ + L+ RG+ Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL-RGLKYIHSAG- 151
Query: 381 LRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHG- 439
IIHRDLK SN+ ++ + +I DFG+A+ Q + T Y APE ++
Sbjct: 152 --IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEIMLNWM 204
Query: 440 QFSVKSDVYSFGVLVLEIITGK 461
++ D++S G ++ E++ GK
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGK 226
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 34/210 (16%)
Query: 276 IKVATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSKSSGQGAEEFKN-----EVV 329
+K ++ + LG G F VYK + +I A+K++ A++ N E+
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK 64
Query: 330 VVAKLQHRNLVRLLG-------------FCLEDPE---KQGQLDWS----RRYKIIGLIA 369
++ +L H N++ LL F D E K L + + Y ++ L
Sbjct: 65 LLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTL-- 122
Query: 370 RGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG 429
+G+ YLH+ I+HRDLK +N+LLD K++DFG+AK FG + ++ T
Sbjct: 123 QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFG-SPNRAYXHQVV-TRW 177
Query: 430 YMAPEYAMHGQ-FSVKSDVYSFGVLVLEII 458
Y APE + + V D+++ G ++ E++
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 38/221 (17%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL----PSGREIAVKRLSKSSGQGAEEFKNEVV--- 329
+V N+F LG G FG+V +L +GR A+K L K +E + +
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 60
Query: 330 VVAKLQHRNLVRL---------LGFCLE-----------DPEKQGQLDWSRRYKIIGLIA 369
V+ +H L L L F +E E+ D +R Y I
Sbjct: 61 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYG--AEIV 118
Query: 370 RGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG 429
+ YLH S +++RDLK+ N++LD + + KI+DFG+ K G+ + GT
Sbjct: 119 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GI-KDGATMKXFCGTPE 174
Query: 430 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 470
Y+APE + D + GV++ E++ G+ FY D
Sbjct: 175 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 213
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 38/221 (17%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL----PSGREIAVKRLSKSSGQGAEEFKNEVV--- 329
+V N+F LG G FG+V +L +GR A+K L K +E + +
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 62
Query: 330 VVAKLQHRNLVRL---------LGFCLE-----------DPEKQGQLDWSRRYKIIGLIA 369
V+ +H L L L F +E E+ D +R Y I
Sbjct: 63 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYG--AEIV 120
Query: 370 RGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG 429
+ YLH S +++RDLK+ N++LD + + KI+DFG+ K G+ + GT
Sbjct: 121 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GI-KDGATMKXFCGTPE 176
Query: 430 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 470
Y+APE + D + GV++ E++ G+ FY D
Sbjct: 177 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 215
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
I + YLH S +++RDLK+ N++LD + + KI+DFG+ K D T GT
Sbjct: 260 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGT 315
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 470
Y+APE + D + GV++ E++ G+ FY D
Sbjct: 316 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 356
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 38/221 (17%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL----PSGREIAVKRLSKSSGQGAEEFKNEVV--- 329
+V N+F LG G FG+V +L +GR A+K L K +E + +
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 61
Query: 330 VVAKLQHRNLVRL---------LGFCLE-----------DPEKQGQLDWSRRYKIIGLIA 369
V+ +H L L L F +E E+ D +R Y I
Sbjct: 62 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYG--AEIV 119
Query: 370 RGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYG 429
+ YLH S +++RDLK+ N++LD + + KI+DFG+ K G+ + GT
Sbjct: 120 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GI-KDGATMKXFCGTPE 175
Query: 430 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 470
Y+APE + D + GV++ E++ G+ FY D
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 214
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
I + YLH S +++RDLK+ N++LD + + KI+DFG+ K D T GT
Sbjct: 257 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGT 312
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 470
Y+APE + D + GV++ E++ G+ FY D
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 353
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 50/212 (23%)
Query: 287 NKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKN-EVVVVAKLQHRNLVRLLGF 345
++G G +GEV+ G G ++AVK + + A F+ E+ ++H N+ LGF
Sbjct: 43 KQIGKGRYGEVWMGKW-RGEKVAVKVFFTT--EEASWFRETEIYQTVLMRHENI---LGF 96
Query: 346 CLEDPEKQGQLDWSRRYKIIGLIARGILY--------------------------LHED- 378
D + G W++ Y I G LY LH +
Sbjct: 97 IAADIKGTGS--WTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 379 ----SRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT---SRIAGTYGYM 431
+ I HRDLK NIL+ I+D G+A F D + + +R+ GT YM
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYM 213
Query: 432 APEYA------MHGQFSVKSDVYSFGVLVLEI 457
PE H Q + +D+YSFG+++ E+
Sbjct: 214 PPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT +AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEALAP 207
Query: 434 EYAMHGQFSVKSDVYSFGVLVLEIITG 460
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 37/213 (17%)
Query: 278 VATNKFSTDNKLGAGGFGEVYK------GVLPSGREIAVKRLSKSS-GQGAEEFKNEVVV 330
+ + + +LG+G F V K G + + I +RLS S G EE + EV +
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 331 VAKLQHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGI 372
+ +++H N++ L G + ++ L + + I G+
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 121
Query: 373 LYLHEDSRLRIIHRDLKVSNI-LLDAEM-NPKIS--DFGMAKIFGVDQTQGNTSR-IAGT 427
YLH RI H DLK NI LLD + NP+I DFG+A GN + I GT
Sbjct: 122 HYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI----EAGNEFKNIFGT 174
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
++APE + +++D++S GV+ +++G
Sbjct: 175 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 37/247 (14%)
Query: 246 KAKKKYNAVPEGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSG 305
K ++++ P+ D+D S E I V +S ++G+GG +V++ VL
Sbjct: 24 KFERQHMDSPDLGTDDDDKASSSAN---ECISVKGRIYSILKQIGSGGSSKVFQ-VLNEK 79
Query: 306 REI-AVK--RLSKSSGQGAEEFKNEVVVVAKLQHRN--LVRLLGFCLEDP-----EKQGQ 355
++I A+K L ++ Q + ++NE+ + KLQ + ++RL + + D + G
Sbjct: 80 KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGN 139
Query: 356 LD---WSRRYKIIGLIARGILY------LHEDSRLRIIHRDLKVSNILLDAEMNPKISDF 406
+D W ++ K I R + +H + I+H DLK +N L+ M K+ DF
Sbjct: 140 IDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDF 198
Query: 407 GMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS------------DVYSFGVLV 454
G+A D T GT YM PE A+ S + DV+S G ++
Sbjct: 199 GIANQMQPDTTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
Query: 455 LEIITGK 461
+ GK
Sbjct: 258 YYMTYGK 264
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 34/219 (15%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVK--RLSKSSGQGAEEFKNEVVV 330
E I V +S ++G+GG +V++ VL ++I A+K L ++ Q + ++NE+
Sbjct: 5 ECISVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 63
Query: 331 VAKLQHRN--LVRLLGFCLEDP-----EKQGQLD---WSRRYKIIGLIARGILY------ 374
+ KLQ + ++RL + + D + G +D W ++ K I R +
Sbjct: 64 LNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEA 123
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPE 434
+H + I+H DLK +N L+ M K+ DFG+A D T GT YM PE
Sbjct: 124 VHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 182
Query: 435 YAMHGQFSVKS------------DVYSFGVLVLEIITGK 461
A+ S + DV+S G ++ + GK
Sbjct: 183 -AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 38/225 (16%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--------SGQGAEEFKNE 327
K +++ LG+G GEV + +++A+K +SK A + E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 328 VVVVAKLQHRNLVRLLGF-----------CLEDPEKQGQLDWSRRYK------IIGLIAR 370
+ ++ KL H ++++ F +E E ++ ++R K +
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNP---KISDFGMAKIFGVDQTQGNTSRIAGT 427
+ YLHE+ IIHRDLK N+LL ++ KI+DFG +KI G + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGT 179
Query: 428 YGYMAPEYAMH---GQFSVKSDVYSFGVLVLEIITGKKNSSFYQT 469
Y+APE + ++ D +S GV++ ++G S ++T
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 34/219 (15%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVK--RLSKSSGQGAEEFKNEVVV 330
E I V +S ++G+GG +V++ VL ++I A+K L ++ Q + ++NE+
Sbjct: 2 ECISVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 60
Query: 331 VAKLQHRN--LVRLLGFCLEDP-----EKQGQLD---WSRRYKIIGLIARGILY------ 374
+ KLQ + ++RL + + D + G +D W ++ K I R +
Sbjct: 61 LNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEA 120
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPE 434
+H + I+H DLK +N L+ M K+ DFG+A D T GT YM PE
Sbjct: 121 VHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 179
Query: 435 YAMHGQFSVKS------------DVYSFGVLVLEIITGK 461
A+ S + DV+S G ++ + GK
Sbjct: 180 -AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 37/210 (17%)
Query: 281 NKFSTDNKLGAGGFGEVYK------GVLPSGREIAVKRLSKSS-GQGAEEFKNEVVVVAK 333
+ + +LG+G F V K G + + I +RLS S G EE + EV ++ +
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 334 LQHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYL 375
++H N++ L G + ++ L + + I G+ YL
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 131
Query: 376 HEDSRLRIIHRDLKVSNI-LLDAEM-NPKIS--DFGMAKIFGVDQTQGNTSR-IAGTYGY 430
H RI H DLK NI LLD + NP+I DFG+A GN + I GT +
Sbjct: 132 HSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI----EAGNEFKNIFGTPEF 184
Query: 431 MAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
+APE + +++D++S GV+ +++G
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 38/225 (16%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--------SGQGAEEFKNE 327
K +++ LG+G GEV + +++A+K +SK A + E
Sbjct: 5 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 64
Query: 328 VVVVAKLQHRNLVRLLGF-----------CLEDPEKQGQLDWSRRYK------IIGLIAR 370
+ ++ KL H ++++ F +E E ++ ++R K +
Sbjct: 65 IEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 124
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNP---KISDFGMAKIFGVDQTQGNTSRIAGT 427
+ YLHE+ IIHRDLK N+LL ++ KI+DFG +KI G + GT
Sbjct: 125 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGT 178
Query: 428 YGYMAPEYAMH---GQFSVKSDVYSFGVLVLEIITGKKNSSFYQT 469
Y+APE + ++ D +S GV++ ++G S ++T
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 223
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 38/225 (16%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--------SGQGAEEFKNE 327
K +++ LG+G GEV + +++A+K +SK A + E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 328 VVVVAKLQHRNLVRLLGF-----------CLEDPEKQGQLDWSRRYK------IIGLIAR 370
+ ++ KL H ++++ F +E E ++ ++R K +
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNP---KISDFGMAKIFGVDQTQGNTSRIAGT 427
+ YLHE+ IIHRDLK N+LL ++ KI+DFG +KI G + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGT 179
Query: 428 YGYMAPEYAMH---GQFSVKSDVYSFGVLVLEIITGKKNSSFYQT 469
Y+APE + ++ D +S GV++ ++G S ++T
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 37/247 (14%)
Query: 246 KAKKKYNAVPEGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSG 305
K ++++ P+ D+D S E I V +S ++G+GG +V++ VL
Sbjct: 24 KFERQHMDSPDLGTDDDDKASSSAN---ECISVKGRIYSILKQIGSGGSSKVFQ-VLNEK 79
Query: 306 REI-AVK--RLSKSSGQGAEEFKNEVVVVAKLQHRN--LVRLLGFCLEDP-----EKQGQ 355
++I A+K L ++ Q + ++NE+ + KLQ + ++RL + + D + G
Sbjct: 80 KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGN 139
Query: 356 LD---WSRRYKIIGLIARGILY------LHEDSRLRIIHRDLKVSNILLDAEMNPKISDF 406
+D W ++ K I R + +H + I+H DLK +N L+ M K+ DF
Sbjct: 140 IDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDF 198
Query: 407 GMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS------------DVYSFGVLV 454
G+A D T GT YM PE A+ S + DV+S G ++
Sbjct: 199 GIANQMQPDTTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
Query: 455 LEIITGK 461
+ GK
Sbjct: 258 YYMTYGK 264
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 45/211 (21%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLG---- 344
+G G +G VYKG L R +AVK S ++ Q KN + V ++H N+ R +
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKN-IYRVPLMEHDNIARFIVGDER 78
Query: 345 ---------FCLEDPEKQGQL---------DWSRRYKIIGLIARGILYLH------EDSR 380
+ + G L DW ++ + RG+ YLH + +
Sbjct: 79 VTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYK 138
Query: 381 LRIIHRDLKVSNILLDAEMNPKISDFGMA-KIFG---VDQTQGNTSRIA--GTYGYMAPE 434
I HRDL N+L+ + ISDFG++ ++ G V + + + I+ GT YMAPE
Sbjct: 139 PAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE 198
Query: 435 YAMHGQFSVKS--------DVYSFGVLVLEI 457
+ G +++ D+Y+ G++ EI
Sbjct: 199 -VLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 96/235 (40%), Gaps = 46/235 (19%)
Query: 267 ESLQFDFEAIKVATNKFSTDNKLGAGGFG--EVYKGVLPSGREIAVKRLSKSSGQGAEEF 324
E+L F + + + KLG GGF ++ +G L G A+KR+ Q EE
Sbjct: 15 ENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEA 73
Query: 325 KNEVVVVAKLQHRNLVRLLGFCLEDPEKQGQLDWSRRYKIIGLIARGILY---------- 374
+ E + H N++RL+ +CL + + + + ++ RG L+
Sbjct: 74 QREADMHRLFNHPNILRLVAYCLRERGAKHE-----AWLLLPFFKRGTLWNEIERLKDKG 128
Query: 375 --LHEDSRLRII----------------HRDLKVSNILLDAEMNPKISDFGMA-----KI 411
L ED L ++ HRDLK +NILL E P + D G +
Sbjct: 129 NFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHV 188
Query: 412 FGVDQ--TQGNTSRIAGTYGYMAPEY---AMHGQFSVKSDVYSFGVLVLEIITGK 461
G Q T + + T Y APE H ++DV+S G ++ ++ G+
Sbjct: 189 EGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 21/180 (11%)
Query: 274 EAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVK--RLSKSSGQGAEEFKNEVVV 330
E I V +S ++G+GG +V++ VL ++I A+K L ++ Q + ++NE+
Sbjct: 1 ECISVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 59
Query: 331 VAKLQHRN--LVRLLGFCLEDP-----EKQGQLD---WSRRYKIIGLIARGILY------ 374
+ KLQ + ++RL + + D + G +D W ++ K I R +
Sbjct: 60 LNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEA 119
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPE 434
+H + I+H DLK +N L+ M K+ DFG+A D T GT YM PE
Sbjct: 120 VHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 178
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 38/225 (16%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--------SGQGAEEFKNE 327
K +++ LG+G GEV + +++A+K +SK A + E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 328 VVVVAKLQHRNLVRLLGF-----------CLEDPEKQGQLDWSRRYK------IIGLIAR 370
+ ++ KL H ++++ F +E E ++ ++R K +
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNP---KISDFGMAKIFGVDQTQGNTSRIAGT 427
+ YLHE+ IIHRDLK N+LL ++ KI+DFG +KI G + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGT 179
Query: 428 YGYMAPEYAMH---GQFSVKSDVYSFGVLVLEIITGKKNSSFYQT 469
Y+APE + ++ D +S GV++ ++G S ++T
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 38/225 (16%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--------SGQGAEEFKNE 327
K +++ LG+G GEV + +++A+K +SK A + E
Sbjct: 12 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 71
Query: 328 VVVVAKLQHRNLVRLLGF-----------CLEDPEKQGQLDWSRRYK------IIGLIAR 370
+ ++ KL H ++++ F +E E ++ ++R K +
Sbjct: 72 IEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 131
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNP---KISDFGMAKIFGVDQTQGNTSRIAGT 427
+ YLHE+ IIHRDLK N+LL ++ KI+DFG +KI G + GT
Sbjct: 132 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGT 185
Query: 428 YGYMAPEYAMH---GQFSVKSDVYSFGVLVLEIITGKKNSSFYQT 469
Y+APE + ++ D +S GV++ ++G S ++T
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 230
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 31/204 (15%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRN 338
T+ + +G G + + + + E AVK + KS EE + +++ QH N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIE---ILLRYGQHPN 77
Query: 339 LVRLLG--------FCLEDPEKQGQL-DWSRRYK---------IIGLIARGILYLHEDSR 380
++ L + + + K G+L D R K ++ I + + YLH
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG- 136
Query: 381 LRIIHRDLKVSNIL-LDAEMNP---KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
++HRDLK SNIL +D NP +I DFG AK + G T ++APE
Sbjct: 137 --VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN--GLLMTPCYTANFVAPEVL 192
Query: 437 MHGQFSVKSDVYSFGVLVLEIITG 460
+ D++S GVL+ ++TG
Sbjct: 193 ERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 31/204 (15%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRN 338
T+ + +G G + + + + E AVK + KS EE + +++ QH N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIE---ILLRYGQHPN 77
Query: 339 LVRLLG--------FCLEDPEKQGQL-DWSRRYK---------IIGLIARGILYLHEDSR 380
++ L + + + K G+L D R K ++ I + + YLH
Sbjct: 78 IITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG- 136
Query: 381 LRIIHRDLKVSNIL-LDAEMNP---KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
++HRDLK SNIL +D NP +I DFG AK + G T ++APE
Sbjct: 137 --VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN--GLLXTPCYTANFVAPEVL 192
Query: 437 MHGQFSVKSDVYSFGVLVLEIITG 460
+ D++S GVL+ +TG
Sbjct: 193 ERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 38/225 (16%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--------SGQGAEEFKNE 327
K +++ LG+G GEV + +++A++ +SK A + E
Sbjct: 145 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 204
Query: 328 VVVVAKLQHRNLVRLLGF-----------CLEDPEKQGQLDWSRRYK------IIGLIAR 370
+ ++ KL H ++++ F +E E ++ ++R K +
Sbjct: 205 IEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 264
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNP---KISDFGMAKIFGVDQTQGNTSRIAGT 427
+ YLHE+ IIHRDLK N+LL ++ KI+DFG +KI G + GT
Sbjct: 265 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGT 318
Query: 428 YGYMAPEYAMH---GQFSVKSDVYSFGVLVLEIITGKKNSSFYQT 469
Y+APE + ++ D +S GV++ ++G S ++T
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 363
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 41/213 (19%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGVL-PSGREIAVKRLSK-SSGQGAEEFKNEVVVVAKLQHR 337
++ F + LG G +G V P+G +A+K++ A E+ ++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 338 NLVRLLGFCLEDP----------EKQGQLDWSR------------RYKIIGLIARGILYL 375
N++ + D ++ Q D R +Y I + R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL-RAVKVL 128
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAG--------- 426
H + +IHRDLK SN+L+++ + K+ DFG+A+I +D++ + S G
Sbjct: 129 HGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTGQQSGMTEXV 183
Query: 427 -TYGYMAPEYAM-HGQFSVKSDVYSFGVLVLEI 457
T Y APE + ++S DV+S G ++ E+
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 41/213 (19%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGVL-PSGREIAVKRLSK-SSGQGAEEFKNEVVVVAKLQHR 337
++ F + LG G +G V P+G +A+K++ A E+ ++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 338 NLVRLLGFCLEDP----------EKQGQLDWSR------------RYKIIGLIARGILYL 375
N++ + D ++ Q D R +Y I + R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL-RAVKVL 128
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAG--------- 426
H + +IHRDLK SN+L+++ + K+ DFG+A+I +D++ + S G
Sbjct: 129 HGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTGQQSGMVEFV 183
Query: 427 -TYGYMAPEYAM-HGQFSVKSDVYSFGVLVLEI 457
T Y APE + ++S DV+S G ++ E+
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL----PSGREIAVKRLSKSSGQGAEEFKNEVV--- 329
KV N F LG G FG+V +L +GR A+K L K +E + V
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 330 VVAKLQHRNLVRL---------LGFCLEDPEKQGQLDW---------SRRYKIIGL-IAR 370
V+ +H L L L F +E G+L + R + G I
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVME-YANGGELFFHLSRERVFTEERARFYGAEIVS 116
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSR-IAGTYG 429
+ YLH +++RD+K+ N++LD + + KI+DFG+ K G+ + G T + GT
Sbjct: 117 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE-GI--SDGATMKTFCGTPE 170
Query: 430 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 470
Y+APE + D + GV++ E++ G+ FY D
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 209
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 41/213 (19%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGVL-PSGREIAVKRLSK-SSGQGAEEFKNEVVVVAKLQHR 337
++ F + LG G +G V P+G +A+K++ A E+ ++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 338 NLVRLLGFCLEDP----------EKQGQLDWSR------------RYKIIGLIARGILYL 375
N++ + D ++ Q D R +Y I + R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL-RAVKVL 128
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAG--------- 426
H + +IHRDLK SN+L+++ + K+ DFG+A+I +D++ + S G
Sbjct: 129 HGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTGQQSGMTEYV 183
Query: 427 -TYGYMAPEYAM-HGQFSVKSDVYSFGVLVLEI 457
T Y APE + ++S DV+S G ++ E+
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL----PSGREIAVKRLSKSSGQGAEEFKNEVV--- 329
KV N F LG G FG+V +L +GR A+K L K +E + V
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 330 VVAKLQHRNLVRL---------LGFCLEDPEKQGQLDW---------SRRYKIIGL-IAR 370
V+ +H L L L F +E G+L + R + G I
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVME-YANGGELFFHLSRERVFTEERARFYGAEIVS 116
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSR-IAGTYG 429
+ YLH +++RD+K+ N++LD + + KI+DFG+ K G+ + G T + GT
Sbjct: 117 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE-GI--SDGATMKTFCGTPE 170
Query: 430 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 470
Y+APE + D + GV++ E++ G+ FY D
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 209
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 38/225 (16%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--------SGQGAEEFKNE 327
K +++ LG+G GEV + +++A++ +SK A + E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190
Query: 328 VVVVAKLQHRNLVRLLGF-----------CLEDPEKQGQLDWSRRYK------IIGLIAR 370
+ ++ KL H ++++ F +E E ++ ++R K +
Sbjct: 191 IEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 250
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNP---KISDFGMAKIFGVDQTQGNTSRIAGT 427
+ YLHE+ IIHRDLK N+LL ++ KI+DFG +KI G + GT
Sbjct: 251 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGT 304
Query: 428 YGYMAPEYAMH---GQFSVKSDVYSFGVLVLEIITGKKNSSFYQT 469
Y+APE + ++ D +S GV++ ++G S ++T
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 349
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 37/207 (17%)
Query: 289 LGAGGFGEVYKGVLPS-GREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFC- 346
LG GG G V+ V + +A+K++ + Q + E+ ++ +L H N+V++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 347 -----------------------------LEDPEKQGQLDWSRRYKIIGLIARGILYLHE 377
L + +QG L + + RG+ Y+H
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHS 138
Query: 378 DSRLRIIHRDLKVSNILLDAE-MNPKISDFGMAKIFGVDQT-QGNTSRIAGTYGYMAPEY 435
+ ++HRDLK +N+ ++ E + KI DFG+A+I + +G+ S T Y +P
Sbjct: 139 AN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRL 195
Query: 436 AMHGQFSVKS-DVYSFGVLVLEIITGK 461
+ K+ D+++ G + E++TGK
Sbjct: 196 LLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL----PSGREIAVKRLSKSSGQGAEEFKNEVV--- 329
KV N F LG G FG+V +L +GR A+K L K +E + V
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 60
Query: 330 VVAKLQHRNLVRL---------LGFCLEDPEKQGQLDW---------SRRYKIIGL-IAR 370
V+ +H L L L F +E G+L + R + G I
Sbjct: 61 VLQNTRHPFLTALKYAFQTHDRLCFVMEYA-NGGELFFHLSRERVFTEERARFYGAEIVS 119
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSR-IAGTYG 429
+ YLH +++RD+K+ N++LD + + KI+DFG+ K G+ + G T + GT
Sbjct: 120 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE-GI--SDGATMKTFCGTPE 173
Query: 430 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 470
Y+APE + D + GV++ E++ G+ FY D
Sbjct: 174 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 212
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL----PSGREIAVKRLSKSSGQGAEEFKNEVV--- 329
KV N F LG G FG+V +L +GR A+K L K +E + V
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 330 VVAKLQHRNLVRL---------LGFCLEDPEKQGQLDW---------SRRYKIIGL-IAR 370
V+ +H L L L F +E G+L + R + G I
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVME-YANGGELFFHLSRERVFTEERARFYGAEIVS 116
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSR-IAGTYG 429
+ YLH +++RD+K+ N++LD + + KI+DFG+ K G+ + G T + GT
Sbjct: 117 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE-GI--SDGATMKXFCGTPE 170
Query: 430 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 470
Y+APE + D + GV++ E++ G+ FY D
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 209
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 100/221 (45%), Gaps = 39/221 (17%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL----PSGREIAVKRLSKSSGQGAEEFKNEVV--- 329
KV N F LG G FG+V +L +GR A+K L K +E + V
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 62
Query: 330 VVAKLQHRNLVRL---------LGFCLEDPEKQGQLDW---------SRRYKIIGL-IAR 370
V+ +H L L L F +E G+L + R + G I
Sbjct: 63 VLQNTRHPFLTALKYAFQTHDRLCFVME-YANGGELFFHLSRERVFTEERARFYGAEIVS 121
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSR-IAGTYG 429
+ YLH SR +++RD+K+ N++LD + + KI+DFG+ K G+ + G T + GT
Sbjct: 122 ALEYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCKE-GI--SDGATMKXFCGTPE 175
Query: 430 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 470
Y+APE + D + GV++ E++ G+ FY D
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 214
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL----PSGREIAVKRLSKSSGQGAEEFKNEVV--- 329
KV N F LG G FG+V +L +GR A+K L K +E + V
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 330 VVAKLQHRNLVRL---------LGFCLEDPEKQGQLDW---------SRRYKIIGL-IAR 370
V+ +H L L L F +E G+L + R + G I
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVME-YANGGELFFHLSRERVFTEERARFYGAEIVS 116
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSR-IAGTYG 429
+ YLH +++RD+K+ N++LD + + KI+DFG+ K G+ + G T + GT
Sbjct: 117 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE-GI--SDGATMKXFCGTPE 170
Query: 430 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 470
Y+APE + D + GV++ E++ G+ FY D
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 209
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 100/221 (45%), Gaps = 39/221 (17%)
Query: 277 KVATNKFSTDNKLGAGGFGEVYKGVL----PSGREIAVKRLSKSSGQGAEEFKNEVV--- 329
KV N F LG G FG+V +L +GR A+K L K +E + V
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 330 VVAKLQHRNLVRL---------LGFCLEDPEKQGQLDW---------SRRYKIIGL-IAR 370
V+ +H L L L F +E G+L + R + G I
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVME-YANGGELFFHLSRERVFTEERARFYGAEIVS 116
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSR-IAGTYG 429
+ YLH SR +++RD+K+ N++LD + + KI+DFG+ K G+ + G T + GT
Sbjct: 117 ALEYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCKE-GI--SDGATMKXFCGTPE 170
Query: 430 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 470
Y+APE + D + GV++ E++ G+ FY D
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 209
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 29/203 (14%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNL 339
++++ +G+G FG E+ + + + E K E++ L+H N+
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNI 76
Query: 340 VRLLGFCLEDPEKQGQLDWSR-------------------RYKIIGLIARGILYLHEDSR 380
VR L ++++ R+ LI+ G+ Y H
Sbjct: 77 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-GVSYCHA--- 132
Query: 381 LRIIHRDLKVSNILLDAEMNP--KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMH 438
+++ HRDLK+ N LLD P KI DFG +K V +Q ++ GT Y+APE +
Sbjct: 133 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQPKST--VGTPAYIAPEVLLK 189
Query: 439 GQFSVK-SDVYSFGVLVLEIITG 460
++ K +DV+S GV + ++ G
Sbjct: 190 KEYDGKVADVWSCGVTLYVMLVG 212
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 30/198 (15%)
Query: 287 NKLGAGGFGEVYKGVLP-SGREIAVKRLSKSSGQGAE-EFKNEVVVVAKLQHRNLVRL-- 342
+KLG G + VYKG + +A+K + +GA EV ++ L+H N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 343 ---------LGFCLEDPEKQGQLDWSRRYKIIGL---------IARGILYLHEDSRLRII 384
L F D + + LD II + + RG+ Y H R +++
Sbjct: 68 IIHTEKSLTLVFEYLDKDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCH---RQKVL 122
Query: 385 HRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM-HGQFSV 443
HRDLK N+L++ K++DFG+A+ + + + T Y P+ + +S
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGSTDYST 180
Query: 444 KSDVYSFGVLVLEIITGK 461
+ D++ G + E+ TG+
Sbjct: 181 QIDMWGVGCIFYEMATGR 198
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 37/213 (17%)
Query: 278 VATNKFSTDNKLGAGGFGEVYK-GVLPSGREIAVKRLSK----SSGQGA--EEFKNEVVV 330
+ + + +LG+G F V K +G+E A K + K SS +G EE + EV +
Sbjct: 23 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNI 82
Query: 331 VAKLQHRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGI 372
+ +++H N++ L G + ++ L + + I G+
Sbjct: 83 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 142
Query: 373 LYLHEDSRLRIIHRDLKVSNI-LLDAEM-NPKIS--DFGMAKIFGVDQTQGNTSR-IAGT 427
YLH RI H DLK NI LLD + NP+I DFG+A GN + I GT
Sbjct: 143 HYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI----EAGNEFKNIFGT 195
Query: 428 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
++APE + +++D++S GV+ +++G
Sbjct: 196 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 21/181 (11%)
Query: 273 FEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVK--RLSKSSGQGAEEFKNEVV 329
F+++ V +S ++G+GG +V++ VL ++I A+K L ++ Q + ++NE+
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 78
Query: 330 VVAKLQHRN--LVRLLGFCLEDP-----EKQGQLD---WSRRYKIIGLIARGILY----- 374
+ KLQ + ++RL + + D + G +D W ++ K I R +
Sbjct: 79 YLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLE 138
Query: 375 -LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAP 433
+H + I+H DLK +N L+ M K+ DFG+A D GT YM P
Sbjct: 139 AVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPP 197
Query: 434 E 434
E
Sbjct: 198 E 198
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGN--TSRIA 425
IA + YLH L I++RDLK NILLD++ + ++DFG+ K + + N TS
Sbjct: 148 IASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK----ENIEHNSTTSTFC 200
Query: 426 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
GT Y+APE + D + G ++ E++ G
Sbjct: 201 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 36/209 (17%)
Query: 285 TDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQ-HRNLVRL 342
T LG G + +V V L +G+E AVK + K +G EV + + Q ++N++ L
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 343 LGFCLEDP------------------EKQGQLDWSRRYKIIGLIARGILYLHEDSRLRII 384
+ F +D +KQ + +++ +A + +LH I
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKG---IA 133
Query: 385 HRDLKVSNILLDA--EMNP-KISDFGMAKIFGVDQ-----TQGNTSRIAGTYGYMAPE-- 434
HRDLK NIL ++ +++P KI DF + ++ T + G+ YMAPE
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVV 193
Query: 435 --YAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ F K D++S GV++ +++G
Sbjct: 194 EVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 29/203 (14%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNL 339
++++ +G+G FG E+ + + + A K E++ L+H N+
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNI 77
Query: 340 VRLLGFCLEDPEKQGQLDWSR-------------------RYKIIGLIARGILYLHEDSR 380
VR L ++++ R+ LI+ G+ Y H
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-GVSYCHA--- 133
Query: 381 LRIIHRDLKVSNILLDAEMNP--KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMH 438
+++ HRDLK+ N LLD P KI DFG +K V +Q ++ GT Y+APE +
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQPKST--VGTPAYIAPEVLLK 190
Query: 439 GQFSVK-SDVYSFGVLVLEIITG 460
++ K +DV+S GV + ++ G
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 280 TNKFSTDNKLGAGGFG--EVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHR 337
++++ +G+G FG + + L + +AVK + + + E + E++ L+H
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKL-TKELVAVKYIERGAAID-ENVQREIINHRSLRHP 76
Query: 338 NLVRLLGFCLEDPEKQGQLDWS---RRYKIIGLIAR---------------GILYLHEDS 379
N+VR L ++++ Y+ I R G+ Y H
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHS-- 134
Query: 380 RLRIIHRDLKVSNILLDAEMNP--KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
++I HRDLK+ N LLD P KI DFG +K V +Q ++ GT Y+APE +
Sbjct: 135 -MQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQPKST--VGTPAYIAPEVLL 190
Query: 438 HGQFSVK-SDVYSFGVLVLEIITG 460
++ K +DV+S GV + ++ G
Sbjct: 191 RQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 31/206 (15%)
Query: 278 VATNKFSTDNKLGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQH 336
V ++ + +G G + E + V + E AVK + KS +EE + +++ QH
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIE---ILLRYGQH 80
Query: 337 RNLVRLLG--------FCLEDPEKQGQL-DWSRRYK---------IIGLIARGILYLHED 378
N++ L + + + + G+L D R K ++ I + + YLH
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 379 SRLRIIHRDLKVSNIL-LDAEMNP---KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPE 434
++HRDLK SNIL +D NP +I DFG AK + G T ++APE
Sbjct: 141 G---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE--NGLLMTPCYTANFVAPE 195
Query: 435 YAMHGQFSVKSDVYSFGVLVLEIITG 460
+ D++S G+L+ ++ G
Sbjct: 196 VLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 31/206 (15%)
Query: 278 VATNKFSTDNKLGAGGFGEVYKGVL-PSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQH 336
V ++ + +G G + E + V + E AVK + KS +EE + +++ QH
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIE---ILLRYGQH 80
Query: 337 RNLVRLLG--------FCLEDPEKQGQL-DWSRRYK---------IIGLIARGILYLHED 378
N++ L + + + + G+L D R K ++ I + + YLH
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 379 SRLRIIHRDLKVSNIL-LDAEMNP---KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPE 434
++HRDLK SNIL +D NP +I DFG AK + G T ++APE
Sbjct: 141 G---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE--NGLLMTPCYTANFVAPE 195
Query: 435 YAMHGQFSVKSDVYSFGVLVLEIITG 460
+ D++S G+L+ ++ G
Sbjct: 196 VLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 72/172 (41%), Gaps = 33/172 (19%)
Query: 270 QFDF--EAIKVATNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAEEFKN 326
Q DF + +++ + L GGF VY+ + SGRE A+KRL + +
Sbjct: 15 QSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQ 74
Query: 327 EVVVVAKLQ-HRNLVR---------------------LLGFC-------LEDPEKQGQLD 357
EV + KL H N+V+ L C L+ E +G L
Sbjct: 75 EVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLS 134
Query: 358 WSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMA 409
KI R + ++H + IIHRDLKV N+LL + K+ DFG A
Sbjct: 135 CDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 109/247 (44%), Gaps = 37/247 (14%)
Query: 246 KAKKKYNAVPEGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSG 305
K ++++ P+ D+D S E I V +S ++G+GG +V++ VL
Sbjct: 24 KFERQHMDSPDLGTDDDDKASSSAN---ECISVKGRIYSILKQIGSGGSSKVFQ-VLNEK 79
Query: 306 REI-AVK--RLSKSSGQGAEEFKNEVVVVAKLQHRN--LVRLLGFCLEDP-----EKQGQ 355
++I A+K L ++ Q + ++NE+ + KLQ + ++RL + + D + G
Sbjct: 80 KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGN 139
Query: 356 LD---WSRRYKIIGLIARGILY------LHEDSRLRIIHRDLKVSNILLDAEMNPKISDF 406
+D W ++ K I R + +H + I+H DLK +N L+ M K+ DF
Sbjct: 140 IDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDF 198
Query: 407 GMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS------------DVYSFGVLV 454
G+A D T G YM PE A+ S + DV+S G ++
Sbjct: 199 GIANQMQPDTTSVVKDSQVGAVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
Query: 455 LEIITGK 461
+ GK
Sbjct: 258 YYMTYGK 264
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 84/197 (42%), Gaps = 25/197 (12%)
Query: 281 NKFSTDNKLGAGGFGEVYK-GVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKL----Q 335
F ++LG G +GEV+K GR AVKR S S +G ++ ++ V Q
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR-SMSPFRGPKDRARKLAEVGSHEKVGQ 115
Query: 336 HRNLVRL-----------LGFCLEDPEKQGQLD-WS---RRYKIIGLIARGILYLHEDSR 380
H VRL L L P Q + W ++ G + +L L
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS 175
Query: 381 LRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQ 440
++H D+K +NI L K+ DFG+ G T G G YMAPE + G
Sbjct: 176 QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG---TAGAGEVQEGDPRYMAPEL-LQGS 231
Query: 441 FSVKSDVYSFGVLVLEI 457
+ +DV+S G+ +LE+
Sbjct: 232 YGTAADVFSLGLTILEV 248
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 272 DFEAIKVATNK--------FSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAE 322
D A K+A K + LG+GGFG VY G+ S +A+K + K
Sbjct: 34 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 93
Query: 323 EFKN------EVVVVAKLQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYK 363
E N EVV++ K+ ++RLL + LE PE Q D+ + R
Sbjct: 94 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 153
Query: 364 IIGLIARGILY-----LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQT 417
+ +AR + + ++HRD+K NIL+D K+ DFG +
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----K 209
Query: 418 QGNTSRIAGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 210 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 272 DFEAIKVATNK--------FSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAE 322
D A K+A K + LG+GGFG VY G+ S +A+K + K
Sbjct: 7 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 66
Query: 323 EFKN------EVVVVAKLQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYK 363
E N EVV++ K+ ++RLL + LE PE Q D+ + R
Sbjct: 67 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 126
Query: 364 IIGLIARGILY-----LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQT 417
+ +AR + + ++HRD+K NIL+D K+ DFG +
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----K 182
Query: 418 QGNTSRIAGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 272 DFEAIKVATNK--------FSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAE 322
D A K+A K + LG+GGFG VY G+ S +A+K + K
Sbjct: 6 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 65
Query: 323 EFKN------EVVVVAKLQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYK 363
E N EVV++ K+ ++RLL + LE PE Q D+ + R
Sbjct: 66 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 125
Query: 364 IIGLIARGILY-----LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQT 417
+ +AR + + ++HRD+K NIL+D K+ DFG +
Sbjct: 126 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----K 181
Query: 418 QGNTSRIAGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 182 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 272 DFEAIKVATNK--------FSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAE 322
D A K+A K + LG+GGFG VY G+ S +A+K + K
Sbjct: 7 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 66
Query: 323 EFKN------EVVVVAKLQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYK 363
E N EVV++ K+ ++RLL + LE PE Q D+ + R
Sbjct: 67 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 126
Query: 364 IIGLIARGILY-----LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQT 417
+ +AR + + ++HRD+K NIL+D K+ DFG +
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----K 182
Query: 418 QGNTSRIAGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 272 DFEAIKVATNK--------FSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAE 322
D A K+A K + LG+GGFG VY G+ S +A+K + K
Sbjct: 6 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 65
Query: 323 EFKN------EVVVVAKLQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYK 363
E N EVV++ K+ ++RLL + LE PE Q D+ + R
Sbjct: 66 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 125
Query: 364 IIGLIARGILY-----LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQT 417
+ +AR + + ++HRD+K NIL+D K+ DFG +
Sbjct: 126 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----K 181
Query: 418 QGNTSRIAGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 182 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 46/208 (22%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGFCLE 348
+G G +GEV++G L G +AVK S Q + E+ L+H N+ LGF
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDNI---LGFIAS 70
Query: 349 DP---------------EKQGQL-DWSRRYKIIGLIAR--------GILYLHED-----S 379
D + G L D+ +R + +A G+ +LH +
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQG 130
Query: 380 RLRIIHRDLKVSNILLDAEMNPKISDFGMAKIF--GVDQTQ-GNTSRIAGTYGYMAPEYA 436
+ I HRD K N+L+ + + I+D G+A + G D GN R+ GT YMAPE
Sbjct: 131 KPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKRYMAPE-V 188
Query: 437 MHGQFSVK-------SDVYSFGVLVLEI 457
+ Q +D+++FG+++ EI
Sbjct: 189 LDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 272 DFEAIKVATNK--------FSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAE 322
D A K+A K + LG+GGFG VY G+ S +A+K + K
Sbjct: 7 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 66
Query: 323 EFKN------EVVVVAKLQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYK 363
E N EVV++ K+ ++RLL + LE PE Q D+ + R
Sbjct: 67 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 126
Query: 364 IIGLIARGILY-----LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQT 417
+ +AR + + ++HRD+K NIL+D K+ DFG +
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----K 182
Query: 418 QGNTSRIAGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 272 DFEAIKVATNK--------FSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAE 322
D A K+A K + LG+GGFG VY G+ S +A+K + K
Sbjct: 20 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 79
Query: 323 EFKN------EVVVVAKLQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYK 363
E N EVV++ K+ ++RLL + LE PE Q D+ + R
Sbjct: 80 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 139
Query: 364 IIGLIARGILY-----LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQT 417
+ +AR + + ++HRD+K NIL+D K+ DFG +
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----K 195
Query: 418 QGNTSRIAGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 272 DFEAIKVATNK--------FSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAE 322
D A K+A K + LG+GGFG VY G+ S +A+K + K
Sbjct: 19 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 78
Query: 323 EFKN------EVVVVAKLQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYK 363
E N EVV++ K+ ++RLL + LE PE Q D+ + R
Sbjct: 79 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 138
Query: 364 IIGLIARGILY-----LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQT 417
+ +AR + + ++HRD+K NIL+D K+ DFG +
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----K 194
Query: 418 QGNTSRIAGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 272 DFEAIKVATNK--------FSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAE 322
D A K+A K + LG+GGFG VY G+ S +A+K + K
Sbjct: 20 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 79
Query: 323 EFKN------EVVVVAKLQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYK 363
E N EVV++ K+ ++RLL + LE PE Q D+ + R
Sbjct: 80 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 139
Query: 364 IIGLIARGILY-----LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQT 417
+ +AR + + ++HRD+K NIL+D K+ DFG +
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----K 195
Query: 418 QGNTSRIAGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 272 DFEAIKVATNK--------FSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAE 322
D A K+A K + LG+GGFG VY G+ S +A+K + K
Sbjct: 19 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 78
Query: 323 EFKN------EVVVVAKLQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYK 363
E N EVV++ K+ ++RLL + LE PE Q D+ + R
Sbjct: 79 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 138
Query: 364 IIGLIARGILY-----LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQT 417
+ +AR + + ++HRD+K NIL+D K+ DFG +
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----K 194
Query: 418 QGNTSRIAGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 272 DFEAIKVATNK--------FSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAE 322
D A K+A K + LG+GGFG VY G+ S +A+K + K
Sbjct: 20 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 79
Query: 323 EFKN------EVVVVAKLQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYK 363
E N EVV++ K+ ++RLL + LE PE Q D+ + R
Sbjct: 80 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 139
Query: 364 IIGLIARGILY-----LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQT 417
+ +AR + + ++HRD+K NIL+D K+ DFG +
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----K 195
Query: 418 QGNTSRIAGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 272 DFEAIKVATNK--------FSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAE 322
D A K+A K + LG+GGFG VY G+ S +A+K + K
Sbjct: 34 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 93
Query: 323 EFKN------EVVVVAKLQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYK 363
E N EVV++ K+ ++RLL + LE PE Q D+ + R
Sbjct: 94 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 153
Query: 364 IIGLIARGILY-----LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQT 417
+ +AR + + ++HRD+K NIL+D K+ DFG +
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----K 209
Query: 418 QGNTSRIAGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 210 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 272 DFEAIKVATNK--------FSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAE 322
D A K+A K + LG+GGFG VY G+ S +A+K + K
Sbjct: 19 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 78
Query: 323 EFKN------EVVVVAKLQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYK 363
E N EVV++ K+ ++RLL + LE PE Q D+ + R
Sbjct: 79 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 138
Query: 364 IIGLIARGILY-----LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQT 417
+ +AR + + ++HRD+K NIL+D K+ DFG +
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----K 194
Query: 418 QGNTSRIAGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 272 DFEAIKVATNK--------FSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAE 322
D A K+A K + LG+GGFG VY G+ S +A+K + K
Sbjct: 19 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 78
Query: 323 EFKN------EVVVVAKLQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYK 363
E N EVV++ K+ ++RLL + LE PE Q D+ + R
Sbjct: 79 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 138
Query: 364 IIGLIARGILY-----LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQT 417
+ +AR + + ++HRD+K NIL+D K+ DFG +
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----K 194
Query: 418 QGNTSRIAGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 272 DFEAIKVATNK--------FSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAE 322
D A K+A K + LG+GGFG VY G+ S +A+K + K
Sbjct: 20 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 79
Query: 323 EFKN------EVVVVAKLQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYK 363
E N EVV++ K+ ++RLL + LE PE Q D+ + R
Sbjct: 80 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 139
Query: 364 IIGLIARGILY-----LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQT 417
+ +AR + + ++HRD+K NIL+D K+ DFG +
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----K 195
Query: 418 QGNTSRIAGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 272 DFEAIKVATNK--------FSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAE 322
D A K+A K + LG+GGFG VY G+ S +A+K + K
Sbjct: 26 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 85
Query: 323 EFKN------EVVVVAKLQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYK 363
E N EVV++ K+ ++RLL + LE PE Q D+ + R
Sbjct: 86 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 145
Query: 364 IIGLIARGILY-----LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQT 417
+ +AR + + ++HRD+K NIL+D K+ DFG +
Sbjct: 146 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----K 201
Query: 418 QGNTSRIAGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 202 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 272 DFEAIKVATNK--------FSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAE 322
D A K+A K + LG+GGFG VY G+ S +A+K + K
Sbjct: 39 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 98
Query: 323 EFKN------EVVVVAKLQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYK 363
E N EVV++ K+ ++RLL + LE PE Q D+ + R
Sbjct: 99 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA 158
Query: 364 IIGLIARGILY-----LHEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQT 417
+ +AR + + ++HRD+K NIL+D K+ DFG +
Sbjct: 159 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----K 214
Query: 418 QGNTSRIAGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 215 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 38/204 (18%)
Query: 289 LGAGGFGEVYKGV-LPSGREIAVK-----RLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
+G G F V + + +G++ AVK + + S G E+ K E + L+H ++V L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 343 L-------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGIL----YLHEDS 379
L C E K+ + + R IL Y H+++
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEI-VKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 380 RLRIIHRDLKVSNILLDAEMNP---KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYA 436
IIHRD+K N+LL ++ N K+ DFG+A G ++ GT +MAPE
Sbjct: 151 ---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG--ESGLVAGGRVGTPHFMAPEVV 205
Query: 437 MHGQFSVKSDVYSFGVLVLEIITG 460
+ DV+ GV++ +++G
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSG 229
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 107/238 (44%), Gaps = 48/238 (20%)
Query: 267 ESLQFDFEAIKVATNKFSTDN-------KLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQ 319
+ + +DF+ +K+++ + ++ K+G G +G VYK G++ L + G
Sbjct: 1 DKMDYDFK-VKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT 59
Query: 320 GAEEFK-NEVVVVAKLQHRNLVRLLGFCLEDPEKQGQL--DWSRR--YKIIGL------- 367
G E+ ++ +L+H N++ L L +++ L D++ + II
Sbjct: 60 GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKAN 119
Query: 368 -----------------IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNP-----KISD 405
I GI YLH + ++HRDLK +NIL+ E P KI+D
Sbjct: 120 KKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGE-GPERGRVKIAD 175
Query: 406 FGMAKIFGVD-QTQGNTSRIAGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITGK 461
G A++F + + + T+ Y APE + + K+ D+++ G + E++T +
Sbjct: 176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRI--- 424
IA + +LH ++HRDLK SNI + K+ DFG+ + +DQ + + +
Sbjct: 173 IAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGL--VTAMDQDEEEQTVLTPM 227
Query: 425 ---------AGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEII 458
GT YM+PE +S K D++S G+++ E++
Sbjct: 228 PAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGA-EEFKNEVV 329
DFE I+ +G GGFG V++ A+KR+ + + A E+ EV
Sbjct: 7 DFEPIQC----------MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVK 56
Query: 330 VVAKLQHRNLVRLLGFCLEDPEKQGQ 355
+AKL+H +VR LE P ++ Q
Sbjct: 57 ALAKLEHPGIVRYFNAWLETPPEKWQ 82
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 289 LGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAEEFKN------EVVVVAKLQH--RNL 339
LG+GGFG VY G+ S +A+K + K E N EVV++ K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 340 VRLLGF---------CLEDPEK-QGQLDW-SRRYKIIGLIARGILY-----LHEDSRLRI 383
+RLL + LE PE Q D+ + R + +AR + + +
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 136
Query: 384 IHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFS 442
+HRD+K NIL+D K+ DFG + + GT Y PE+ + ++
Sbjct: 137 LHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 443 VKS-DVYSFGVLVLEIITG 460
+S V+S G+L+ +++ G
Sbjct: 193 GRSAAVWSLGILLYDMVCG 211
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 281 NKFSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAEEFKN------EVVVVAK 333
+++ LG+GGFG VY G+ S +A+K + K E N EVV++ K
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 334 LQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYKIIGLIARGILY-----L 375
+ ++RLL + LE PE Q D+ + R + +AR + +
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPE 434
++HRD+K NIL+D K+ DFG + + GT Y PE
Sbjct: 124 RHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPE 179
Query: 435 YAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ + ++ +S V+S G+L+ +++ G
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 289 LGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAEEFKN------EVVVVAKLQH--RNL 339
LG+GGFG VY G+ S +A+K + K E N EVV++ K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 340 VRLLGF---------CLEDPEK-QGQLDW-SRRYKIIGLIARGILY-----LHEDSRLRI 383
+RLL + LE PE Q D+ + R + +AR + + +
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 136
Query: 384 IHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFS 442
+HRD+K NIL+D K+ DFG + + GT Y PE+ + ++
Sbjct: 137 LHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 443 VKS-DVYSFGVLVLEIITG 460
+S V+S G+L+ +++ G
Sbjct: 193 GRSAAVWSLGILLYDMVCG 211
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 39/210 (18%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKS--------SGQGAEEFKNEVVV 330
+ K+ST + LG+G FG V+ V +E+ VK + K + E+ +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 331 VAKLQHRNLVRLL------GFCLEDPEKQG-------------QLDWSRRYKIIGLIARG 371
+++++H N++++L GF EK G +LD I +
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSA 142
Query: 372 ILYLHEDSRLR-IIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNT-SRIAGTYG 429
+ YL RL+ IIHRD+K NI++ + K+ DFG A +G GT
Sbjct: 143 VGYL----RLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL----ERGKLFYTFCGTIE 194
Query: 430 YMAPEYAMHGQF-SVKSDVYSFGVLVLEII 458
Y APE M + + +++S GV + ++
Sbjct: 195 YCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 289 LGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAEEFKN------EVVVVAKLQH--RNL 339
LG+GGFG VY G+ S +A+K + K E N EVV++ K+ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 340 VRLLGF---------CLEDPEK-QGQLDW-SRRYKIIGLIARGILY-----LHEDSRLRI 383
+RLL + LE PE Q D+ + R + +AR + + +
Sbjct: 76 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 135
Query: 384 IHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFS 442
+HRD+K NIL+D K+ DFG + + GT Y PE+ + ++
Sbjct: 136 LHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYH 191
Query: 443 VKS-DVYSFGVLVLEIITG 460
+S V+S G+L+ +++ G
Sbjct: 192 GRSAAVWSLGILLYDMVCG 210
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 281 NKFSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAEEFKN------EVVVVAK 333
+++ LG+GGFG VY G+ S +A+K + K E N EVV++ K
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 66
Query: 334 LQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYKIIGLIARGILY-----L 375
+ ++RLL + LE PE Q D+ + R + +AR + +
Sbjct: 67 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 126
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPE 434
++HRD+K NIL+D K+ DFG + + GT Y PE
Sbjct: 127 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPE 182
Query: 435 YAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ + ++ +S V+S G+L+ +++ G
Sbjct: 183 WIRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 281 NKFSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAEEFKN------EVVVVAK 333
+++ LG+GGFG VY G+ S +A+K + K E N EVV++ K
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 334 LQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYKIIGLIARGILY-----L 375
+ ++RLL + LE PE Q D+ + R + +AR + +
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 128
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPE 434
++HRD+K NIL+D K+ DFG + + GT Y PE
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPE 184
Query: 435 YAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ + ++ +S V+S G+L+ +++ G
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 281 NKFSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAEEFKN------EVVVVAK 333
+++ LG+GGFG VY G+ S +A+K + K E N EVV++ K
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 334 LQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYKIIGLIARGILY-----L 375
+ ++RLL + LE PE Q D+ + R + +AR + +
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPE 434
++HRD+K NIL+D K+ DFG + + GT Y PE
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPE 179
Query: 435 YAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ + ++ +S V+S G+L+ +++ G
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 281 NKFSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAEEFKN------EVVVVAK 333
+++ LG+GGFG VY G+ S +A+K + K E N EVV++ K
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 334 LQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYKIIGLIARGILY-----L 375
+ ++RLL + LE PE Q D+ + R + +AR + +
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPE 434
++HRD+K NIL+D K+ DFG + + GT Y PE
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPE 179
Query: 435 YAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ + ++ +S V+S G+L+ +++ G
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 27/200 (13%)
Query: 283 FSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSS-GQGAEEFKNEVVVVAKLQHRNLV 340
+ +G GGF +V + +G +A+K + K++ G K E+ + L+H+++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 341 RL-------------LGFC-----LEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLR 382
+L L +C + Q +L + I + Y+H
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQG--- 128
Query: 383 IIHRDLKVSNILLDAEMNPKISDFGM-AKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQF 441
HRDLK N+L D K+ DFG+ AK G T G+ Y APE +
Sbjct: 129 YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTC--CGSLAYAAPELIQGKSY 186
Query: 442 -SVKSDVYSFGVLVLEIITG 460
++DV+S G+L+ ++ G
Sbjct: 187 LGSEADVWSMGILLYVLMCG 206
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 29/203 (14%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNL 339
++++ +G+G FG E+ + + + E K E++ L+H N+
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNI 77
Query: 340 VRLLGFCLEDPEKQGQLDWSR-------------------RYKIIGLIARGILYLHEDSR 380
VR L ++++ R+ LI+ G+ Y H
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-GVSYCHA--- 133
Query: 381 LRIIHRDLKVSNILLDAEMNP--KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMH 438
+++ HRDLK+ N LLD P KI FG +K V +Q ++ GT Y+APE +
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSK-SSVLHSQPKST--VGTPAYIAPEVLLK 190
Query: 439 GQFSVK-SDVYSFGVLVLEIITG 460
++ K +DV+S GV + ++ G
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 13/116 (11%)
Query: 357 DWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQ 416
D +R Y IG + I +H+ L +HRD+K N+LLD + +++DFG D
Sbjct: 191 DMARFY--IGEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDG 245
Query: 417 TQGNTSRIAGTYGYMAPEY--AMH---GQFSVKSDVYSFGVLVLEIITGKKNSSFY 467
T +S GT Y++PE AM G++ + D +S GV + E++ G+ + FY
Sbjct: 246 TV-QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE--TPFY 298
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 13/116 (11%)
Query: 357 DWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQ 416
D +R Y IG + I +H+ L +HRD+K N+LLD + +++DFG D
Sbjct: 175 DMARFY--IGEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDG 229
Query: 417 TQGNTSRIAGTYGYMAPEY--AMH---GQFSVKSDVYSFGVLVLEIITGKKNSSFY 467
T +S GT Y++PE AM G++ + D +S GV + E++ G+ + FY
Sbjct: 230 TV-QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE--TPFY 282
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 39/209 (18%)
Query: 283 FSTDNKLGAGGFGEVYKGVLPS-GREIAVK----RLSKSSGQGA--EEFKNEVVVVAKLQ 335
+ +LG+G F V K S G E A K R S++S +G EE + EV ++ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 336 HRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHE 377
H N++ L G + ++ L I I G+ YLH
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 378 DSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIF--GVDQTQGNTSRIAGTYGYM 431
+I H DLK NI+L + P K+ DFG+A GV+ I GT ++
Sbjct: 134 K---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-----FKNIFGTPEFV 185
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIITG 460
APE + +++D++S GV+ +++G
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 281 NKFSTDNKLGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAEEFKN------EVVVVAK 333
+++ LG+GGFG VY G+ S +A+K + K E N EVV++ K
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 90
Query: 334 LQH--RNLVRLLGF---------CLEDPEK-QGQLDW-SRRYKIIGLIARGILY-----L 375
+ ++RLL + LE PE Q D+ + R + +AR + +
Sbjct: 91 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 150
Query: 376 HEDSRLRIIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPE 434
++HRD+K NIL+D K+ DFG + + GT Y PE
Sbjct: 151 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPE 206
Query: 435 YAMHGQFSVKS-DVYSFGVLVLEIITG 460
+ + ++ +S V+S G+L+ +++ G
Sbjct: 207 WIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 43/191 (22%)
Query: 275 AIKVATNKFSTDNKLGAGGFGE-VYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAK 333
+ V F + LG G G VY+G+ R++AVKR+ A+ EV ++ +
Sbjct: 18 VVIVGKISFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFAD---REVQLLRE 73
Query: 334 L-QHRNLVRLLGFCLEDPEKQGQLDW---------------SRRYKIIGL--------IA 369
+H N++R FC E K Q + + + +GL
Sbjct: 74 SDEHPNVIRY--FCTE---KDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTT 128
Query: 370 RGILYLHEDSRLRIIHRDLKVSNILL-----DAEMNPKISDFGMAKIFGVDQTQ-GNTSR 423
G+ +LH L I+HRDLK NIL+ ++ ISDFG+ K V + S
Sbjct: 129 SGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSG 185
Query: 424 IAGTYGYMAPE 434
+ GT G++APE
Sbjct: 186 VPGTEGWIAPE 196
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 29/203 (14%)
Query: 280 TNKFSTDNKLGAGGFGEVYKGVLPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNL 339
++++ +G+G FG E+ + + + E K E++ L+H N+
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNI 77
Query: 340 VRLLGFCLEDPEKQGQLDWSR-------------------RYKIIGLIARGILYLHEDSR 380
VR L ++++ R+ LI+ G+ Y H
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-GVSYCHA--- 133
Query: 381 LRIIHRDLKVSNILLDAEMNP--KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMH 438
+++ HRDLK+ N LLD P KI FG +K + +T GT Y+APE +
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT---VGTPAYIAPEVLLK 190
Query: 439 GQFSVK-SDVYSFGVLVLEIITG 460
++ K +DV+S GV + ++ G
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 39/209 (18%)
Query: 283 FSTDNKLGAGGFGEVYKGVLPS-GREIAVK----RLSKSSGQGA--EEFKNEVVVVAKLQ 335
+ +LG+G F V K S G E A K R S++S +G EE + EV ++ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 336 HRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHE 377
H N++ L G + ++ L I I G+ YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 378 DSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIF--GVDQTQGNTSRIAGTYGYM 431
+I H DLK NI+L + P K+ DFG+A GV+ I GT ++
Sbjct: 134 K---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-----FKNIFGTPEFV 185
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIITG 460
APE + +++D++S GV+ +++G
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 12/96 (12%)
Query: 363 KIIGLIARGIL----YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQ 418
++I I + +L Y+H + I HRD+K SNIL+D K+SDFG ++ + +
Sbjct: 151 QVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIK 208
Query: 419 GNTSRIAGTYGYMAPE-YAMHGQFS-VKSDVYSFGV 452
G SR GTY +M PE ++ ++ K D++S G+
Sbjct: 209 G--SR--GTYEFMPPEFFSNESSYNGAKVDIWSLGI 240
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 39/209 (18%)
Query: 283 FSTDNKLGAGGFGEVYKGVLPS-GREIAVK----RLSKSSGQGA--EEFKNEVVVVAKLQ 335
+ +LG+G F V K S G E A K R S++S +G EE + EV ++ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 336 HRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHE 377
H N++ L G + ++ L I I G+ YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 378 DSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIF--GVDQTQGNTSRIAGTYGYM 431
+I H DLK NI+L + P K+ DFG+A GV+ I GT ++
Sbjct: 134 K---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-----FKNIFGTPEFV 185
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIITG 460
APE + +++D++S GV+ +++G
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 39/209 (18%)
Query: 283 FSTDNKLGAGGFGEVYKGVLPS-GREIAVK----RLSKSSGQGA--EEFKNEVVVVAKLQ 335
+ +LG+G F V K S G E A K R S++S +G EE + EV ++ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 336 HRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHE 377
H N++ L G + ++ L I I G+ YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 378 DSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIF--GVDQTQGNTSRIAGTYGYM 431
+I H DLK NI+L + P K+ DFG+A GV+ I GT ++
Sbjct: 134 K---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-----FKNIFGTPEFV 185
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIITG 460
APE + +++D++S GV+ +++G
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 39/209 (18%)
Query: 283 FSTDNKLGAGGFGEVYKGVLPS-GREIAVK----RLSKSSGQGA--EEFKNEVVVVAKLQ 335
+ +LG+G F V K S G E A K R S++S +G EE + EV ++ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 336 HRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHE 377
H N++ L G + ++ L I I G+ YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 378 DSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIF--GVDQTQGNTSRIAGTYGYM 431
+I H DLK NI+L + P K+ DFG+A GV+ I GT ++
Sbjct: 134 K---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-----FKNIFGTPEFV 185
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIITG 460
APE + +++D++S GV+ +++G
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 368 IARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGT 427
+A ++ + +L +HRD+K NIL+D + +++DFG D T +S GT
Sbjct: 181 LAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV-QSSVAVGT 239
Query: 428 YGYMAPEY--AMH---GQFSVKSDVYSFGVLVLEIITGKKNSSFY 467
Y++PE AM G++ + D +S GV + E++ G+ + FY
Sbjct: 240 PDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE--TPFY 282
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 85/202 (42%), Gaps = 28/202 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNL 339
+ + +LG G FG V++ +G A K + E + E+ ++ L+H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 340 VRLLGFCLEDPE-------------------KQGQLDWSRRYKIIGLIARGILYLHEDSR 380
V L +D E + ++ + + + +G+ ++HE++
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN- 275
Query: 381 LRIIHRDLKVSNILLDAEMNP--KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMH 438
+H DLK NI+ + + K+ DFG+ Q+ T+ GT + APE A
Sbjct: 276 --YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEG 330
Query: 439 GQFSVKSDVYSFGVLVLEIITG 460
+D++S GVL +++G
Sbjct: 331 KPVGYYTDMWSVGVLSYILLSG 352
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 361 RYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIF--GVDQTQ 418
RY + L+ RG+ Y+H ++IHRDLK SN+L++ KI DFGMA+ + Q
Sbjct: 162 RYFLYQLL-RGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ 217
Query: 419 GNTSRIAGTYGYMAPEYAMH-GQFSVKSDVYSFGVLVLEIITGKK 462
+ T Y APE + +++ D++S G + E++ ++
Sbjct: 218 YFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 85/202 (42%), Gaps = 28/202 (13%)
Query: 281 NKFSTDNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNL 339
+ + +LG G FG V++ +G A K + E + E+ ++ L+H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 340 VRLLGFCLEDPE-------------------KQGQLDWSRRYKIIGLIARGILYLHEDSR 380
V L +D E + ++ + + + +G+ ++HE++
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN- 169
Query: 381 LRIIHRDLKVSNILLDAEMNP--KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMH 438
+H DLK NI+ + + K+ DFG+ Q+ T+ GT + APE A
Sbjct: 170 --YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEG 224
Query: 439 GQFSVKSDVYSFGVLVLEIITG 460
+D++S GVL +++G
Sbjct: 225 KPVGYYTDMWSVGVLSYILLSG 246
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 39/209 (18%)
Query: 283 FSTDNKLGAGGFGEVYKGVLPS-GREIAVK----RLSKSSGQGA--EEFKNEVVVVAKLQ 335
+ +LG+G F V K S G E A K R S++S +G EE + EV ++ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 336 HRNLVRLL------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHE 377
H N++ L G + ++ L I I G+ YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 378 DSRLRIIHRDLKVSNILLDAEMNP----KISDFGMAKIF--GVDQTQGNTSRIAGTYGYM 431
+I H DLK NI+L + P K+ DFG+A GV+ I GT ++
Sbjct: 134 K---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-----FKNIFGTPEFV 185
Query: 432 APEYAMHGQFSVKSDVYSFGVLVLEIITG 460
APE + +++D++S GV+ +++G
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 289 LGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAEEFKN------EVVVVAKLQ----HR 337
LG GGFG V+ G + R ++A+K + ++ G + EV ++ K+ H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 338 NLVRLL-------GF--CLEDP----------EKQGQLDWSRRYKIIGLIARGILYLHED 378
++RLL GF LE P ++G L G + I + H
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR 158
Query: 379 SRLRIIHRDLKVSNILLDAEMN-PKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAM 437
++HRD+K NIL+D K+ DFG + + + GT Y PE+
Sbjct: 159 G---VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP----YTDFDGTRVYSPPEWIS 211
Query: 438 HGQF-SVKSDVYSFGVLVLEIITG 460
Q+ ++ + V+S G+L+ +++ G
Sbjct: 212 RHQYHALPATVWSLGILLYDMVCG 235
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 361 RYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIF--GVDQTQ 418
RY + L+ RG+ Y+H ++IHRDLK SN+L++ KI DFGMA+ + Q
Sbjct: 161 RYFLYQLL-RGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ 216
Query: 419 GNTSRIAGTYGYMAPEYAMH-GQFSVKSDVYSFGVLVLEIITGKK 462
+ T Y APE + +++ D++S G + E++ ++
Sbjct: 217 YFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 19/123 (15%)
Query: 350 PEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMA 409
PEK W++ Y A +L L + +IHRD+K N+LLD + K++DFG
Sbjct: 172 PEK-----WAKFY-----TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTC 221
Query: 410 KIFGVDQT-QGNTSRIAGTYGYMAPEYAM----HGQFSVKSDVYSFGVLVLEIITGKKNS 464
+D+T + GT Y++PE G + + D +S GV + E++ G ++
Sbjct: 222 --MKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG--DT 277
Query: 465 SFY 467
FY
Sbjct: 278 PFY 280
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 25/196 (12%)
Query: 286 DNKLGAGGFGEVYKGVLP-SGREIAVKRLSKSSGQGAE---------EFKNEVVVVAKLQ 335
D LG G F K V S + AVK +SK + E +V + ++
Sbjct: 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVF 75
Query: 336 HRNLVRLL-------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIHRDL 388
H L L G E +K+ + I+ + + ++H+ + ++HRDL
Sbjct: 76 HDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDL 132
Query: 389 KVSNILLDAE---MNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVKS 445
K N+L E + KI DFG A++ D T T Y APE +
Sbjct: 133 KPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP--CFTLHYAAPELLNQNGYDESC 190
Query: 446 DVYSFGVLVLEIITGK 461
D++S GV++ +++G+
Sbjct: 191 DLWSLGVILYTMLSGQ 206
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 28/196 (14%)
Query: 287 NKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGF 345
+LG+G FG V++ V +GR K ++ KNE+ ++ +L H L+ L
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 346 CLEDPEKQGQLDWSRRYKIIGLIA-------------------RGILYLHEDSRLRIIHR 386
+ E L++ ++ IA G+ ++HE S I+H
Sbjct: 117 FEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHL 173
Query: 387 DLKVSNILLDAEM--NPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSVK 444
D+K NI+ + + + KI DFG+A D+ T+ T + APE
Sbjct: 174 DIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVDREPVGFY 230
Query: 445 SDVYSFGVLVLEIITG 460
+D+++ GVL +++G
Sbjct: 231 TDMWAIGVLGYVLLSG 246
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 94/229 (41%), Gaps = 57/229 (24%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSK-------SSGQGAEE 323
D+E +KV +G G FGEV S R++ A+K LSK S EE
Sbjct: 75 DYEVVKV----------IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 324 -----FKNEVVVVAKLQHRNLVRLLGFCLED---------------PEKQGQLDWSRRYK 363
F N VV R L +E PEK W+R Y
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK-----WARFY- 178
Query: 364 IIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGM-AKIFGVDQTQGNTS 422
A +L L + IHRD+K N+LLD + K++DFG K+ + +T+
Sbjct: 179 ----TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 234
Query: 423 RIAGTYGYMAPEYAM----HGQFSVKSDVYSFGVLVLEIITGKKNSSFY 467
GT Y++PE G + + D +S GV + E++ G ++ FY
Sbjct: 235 --VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG--DTPFY 279
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 94/229 (41%), Gaps = 57/229 (24%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSK-------SSGQGAEE 323
D+E +KV +G G FGEV S R++ A+K LSK S EE
Sbjct: 70 DYEVVKV----------IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 119
Query: 324 -----FKNEVVVVAKLQHRNLVRLLGFCLE---------------DPEKQGQLDWSRRYK 363
F N VV R L +E PEK W+R Y
Sbjct: 120 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK-----WARFY- 173
Query: 364 IIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGM-AKIFGVDQTQGNTS 422
A +L L + IHRD+K N+LLD + K++DFG K+ + +T+
Sbjct: 174 ----TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 229
Query: 423 RIAGTYGYMAPEYAM----HGQFSVKSDVYSFGVLVLEIITGKKNSSFY 467
GT Y++PE G + + D +S GV + E++ G ++ FY
Sbjct: 230 --VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG--DTPFY 274
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 94/229 (41%), Gaps = 57/229 (24%)
Query: 272 DFEAIKVATNKFSTDNKLGAGGFGEVYKGVLPSGREI-AVKRLSK-------SSGQGAEE 323
D+E +KV +G G FGEV S R++ A+K LSK S EE
Sbjct: 75 DYEVVKV----------IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 324 -----FKNEVVVVAKLQHRNLVRLLGFCLED---------------PEKQGQLDWSRRYK 363
F N VV R L +E PEK W+R Y
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK-----WARFY- 178
Query: 364 IIGLIARGILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGM-AKIFGVDQTQGNTS 422
A +L L + IHRD+K N+LLD + K++DFG K+ + +T+
Sbjct: 179 ----TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 234
Query: 423 RIAGTYGYMAPEYAM----HGQFSVKSDVYSFGVLVLEIITGKKNSSFY 467
GT Y++PE G + + D +S GV + E++ G ++ FY
Sbjct: 235 --VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG--DTPFY 279
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 97/240 (40%), Gaps = 53/240 (22%)
Query: 254 VPEGNADNDLTTLESLQFDFEAIKVATNKFSTDNKLGAGGFGEVYKGV-LPSGREIAVK- 311
VP G+ +D E + +E +V +G G F V + + +G++ AVK
Sbjct: 12 VPRGSMADDDVLFEDV---YELCEV----------IGKGPFSVVRRCINRETGQQFAVKI 58
Query: 312 ----RLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLL-------------------GFCLE 348
+ + S G E+ K E + L+H ++V LL C E
Sbjct: 59 VDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFE 118
Query: 349 DPEKQGQLDWSRRYKIIGLIARGIL----YLHEDSRLRIIHRDLKVSNILLDAEMNPKIS 404
K+ + + R IL Y H+++ IIHRD+K +LL ++ N
Sbjct: 119 I-VKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPV 174
Query: 405 DFGMAKIFGVDQTQGNTSRIAG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 460
G FGV G + +AG T +MAPE + DV+ GV++ +++G
Sbjct: 175 KLGG---FGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 40/205 (19%)
Query: 289 LGAGGFGEVYKGV-LPSGREIAVK-----RLSKSSGQGAEEFKNEVVVVAKLQHRNLVRL 342
+G G F V + + +G++ AVK + + S G E+ K E + L+H ++V L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 343 L-------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGIL----YLHEDS 379
L C E K+ + + R IL Y H+++
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEI-VKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 380 RLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAG----TYGYMAPEY 435
IIHRD+K +LL ++ N G FGV G + +AG T +MAPE
Sbjct: 151 ---IIHRDVKPHCVLLASKENSAPVKLGG---FGVAIQLGESGLVAGGRVGTPHFMAPEV 204
Query: 436 AMHGQFSVKSDVYSFGVLVLEIITG 460
+ DV+ GV++ +++G
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 33/200 (16%)
Query: 289 LGAGGFGEVYKGVLPSGR-EIAVKRLSKSSGQGAEEFKN------EVVVVAKLQH--RNL 339
LG+GGFG VY G+ S +A+K + K E N EVV++ K+ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 340 VRLLGFCLEDPEK-----------QGQLDW-SRRYKIIGLIARGILY-----LHEDSRLR 382
+RLL + E P+ Q D+ + R + +AR + +
Sbjct: 76 IRLLDW-FERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 383 IIHRDLKVSNILLDAEMNP-KISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQF 441
++HRD+K NIL+D K+ DFG + + GT Y PE+ + ++
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRY 190
Query: 442 SVKS-DVYSFGVLVLEIITG 460
+S V+S G+L+ +++ G
Sbjct: 191 HGRSAAVWSLGILLYDMVCG 210
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 44/217 (20%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSSGQG-----------AEEFKNEVVVVAKLQHR 337
+ +G +G V GV G +A+KR+ + G + E+ ++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 338 NLV--RLLGFCLEDPEKQ-------------GQLDWSRRYKI--------IGLIARGILY 374
N++ R + E+P Q+ +R I + I G+
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHV 149
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPE 434
LHE ++HRDL NILL + I DF +A+ D N + Y APE
Sbjct: 150 LHEAG---VVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRAPE 203
Query: 435 YAMHGQ-FSVKSDVYSFGVLVLEIITGK---KNSSFY 467
M + F+ D++S G ++ E+ K + S+FY
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY 240
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 44/217 (20%)
Query: 289 LGAGGFGEVYKGVLPSGREIAVKRLSKSSGQG-----------AEEFKNEVVVVAKLQHR 337
+ +G +G V GV G +A+KR+ + G + E+ ++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 338 NLV--RLLGFCLEDPEKQ-------------GQLDWSRRYKI--------IGLIARGILY 374
N++ R + E+P Q+ +R I + I G+
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHV 149
Query: 375 LHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPE 434
LHE ++HRDL NILL + I DF +A+ D N + Y APE
Sbjct: 150 LHEAG---VVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRAPE 203
Query: 435 YAMHGQ-FSVKSDVYSFGVLVLEIITGK---KNSSFY 467
M + F+ D++S G ++ E+ K + S+FY
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY 240
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 24/129 (18%)
Query: 356 LDWSRRYKIIGL---IARGILYLHEDSRLRIIHRDLKVSNILLDAE-------------M 399
L + Y I L IA G+ +LH L+IIHRDLK NIL+ +
Sbjct: 127 LKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENL 183
Query: 400 NPKISDFGMAKIFGVDQT--QGNTSRIAGTYGYMAPEY---AMHGQFSVKSDVYSFGVLV 454
ISDFG+ K Q + N + +GT G+ APE + + + D++S G +
Sbjct: 184 RILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243
Query: 455 LEIITGKKN 463
I++ K+
Sbjct: 244 YYILSKGKH 252
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 24/129 (18%)
Query: 356 LDWSRRYKIIGL---IARGILYLHEDSRLRIIHRDLKVSNILLDAE-------------M 399
L + Y I L IA G+ +LH L+IIHRDLK NIL+ +
Sbjct: 127 LKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENL 183
Query: 400 NPKISDFGMAKIFGVDQT--QGNTSRIAGTYGYMAPEY---AMHGQFSVKSDVYSFGVLV 454
ISDFG+ K Q + N + +GT G+ APE + + + D++S G +
Sbjct: 184 RILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243
Query: 455 LEIITGKKN 463
I++ K+
Sbjct: 244 YYILSKGKH 252
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 47/215 (21%)
Query: 282 KFSTDNKLGAGGFGEVYKGVLPSGREIAVKR--------LSKSSGQGAEEFKNEVVVVAK 333
K+ + LG G +G+V K VL S E +R + G K E+ ++ +
Sbjct: 6 KYLMGDLLGEGSYGKV-KEVLDS--ETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRR 62
Query: 334 LQHRNLVRLLGFCLEDPEKQGQLDWSRRYKIIGL-----------------------IAR 370
L+H+N+++L+ L + EKQ ++ Y + G+ +
Sbjct: 63 LRHKNVIQLVD-VLYNEEKQ-KMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLID 120
Query: 371 GILYLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAKI---FGVDQTQGNTSRIAGT 427
G+ YLH I+H+D+K N+LL KIS G+A+ F D T TS+ G+
Sbjct: 121 GLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDT-CRTSQ--GS 174
Query: 428 YGYMAPEYA--MHGQFSVKSDVYSFGVLVLEIITG 460
+ PE A + K D++S GV + I TG
Sbjct: 175 PAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 36/199 (18%)
Query: 288 KLGAGGFGEVYKGVLPSGREIAVK--RLSKSSGQGAEEFKNEVVVVAKLQHRNLVRLLGF 345
KL GE++KG G +I VK ++ S + + +F E + H N++ +LG
Sbjct: 17 KLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGA 75
Query: 346 CLEDPEKQGQL----------------------DWSRRYKIIGLIARGILYLHEDSRLRI 383
C P L D S+ K +ARG+ +LH L I
Sbjct: 76 CQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPL-I 134
Query: 384 IHRDLKVSNILLDAEMNPKISDFGMAKIFGVDQTQGNTSRIAGTYGYMAPEYAMHGQFSV 443
L ++++D +M +IS MA + Q+ G A ++APE
Sbjct: 135 PRHALNSRSVMIDEDMTARIS---MADVKFSFQSPGRMYAPA----WVAPEALQKKPEDT 187
Query: 444 ---KSDVYSFGVLVLEIIT 459
+D++SF VL+ E++T
Sbjct: 188 NRRSADMWSFAVLLWELVT 206
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 28/133 (21%)
Query: 356 LDWSRRYKIIGL---IARGILYLHEDSRLRIIHRDLKVSNILLDAE-------------M 399
L + Y I L IA G+ +LH L+IIHRDLK NIL+ +
Sbjct: 109 LKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENL 165
Query: 400 NPKISDFGMAKIFGVDQT--QGNTSRIAGTYGYMAPEYAMHG-------QFSVKSDVYSF 450
ISDFG+ K Q+ + N + +GT G+ APE + + D++S
Sbjct: 166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSM 225
Query: 451 GVLVLEIITGKKN 463
G + I++ K+
Sbjct: 226 GCVFYYILSKGKH 238
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 103/243 (42%), Gaps = 58/243 (23%)
Query: 281 NKFSTDNKLGAGGFG---EVYKGVLPSGREIAVKRLSK--SSGQGAEEFKNEVVVVAKLQ 335
+++ + +G G +G E Y + R +A+K++ + + E+ ++ +L
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKL--EKRVVAIKKILRVFEDLIDCKRILREIAILNRLN 110
Query: 336 HRNLVRLLGFCL-EDPEKQGQL---------DWSRRYK------------IIGLIARGIL 373
H ++V++L + +D EK +L D+ + ++ ++ + G+
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVK 170
Query: 374 YLHEDSRLRIIHRDLKVSNILLDAEMNPKISDFGMAK----------------------I 411
Y+H I+HRDLK +N L++ + + K+ DFG+A+ +
Sbjct: 171 YVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNL 227
Query: 412 FGVDQTQGNTSRIAG---TYGYMAPEYA-MHGQFSVKSDVYSFGVLVLEIITGKKNSSFY 467
T+ ++ G T Y APE + ++ DV+S G + E++ K + Y
Sbjct: 228 VTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY 287
Query: 468 QTD 470
D
Sbjct: 288 HAD 290
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 42/211 (19%)
Query: 286 DNKLGAGGFGEVYKGV-LPSGREIAVKRLSKSSGQGAEEFKNEVVVVAKLQ-HRNLVRLL 343
++ LG G V + L + +E AVK + K G EV ++ + Q HRN++ L+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 344 ------------------GFCLEDPEKQGQLDWSRRYKIIGLIARGILYLHEDSRLRIIH 385
G L K+ + ++ +A + +LH I H
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKG---IAH 134
Query: 386 RDLKVSNILLDA--EMNP-KISDFGMAKIFGVDQTQGNTSRIA--------GTYGYMAPE 434
RDLK NIL + +++P KI DFG+ G+ + G+ S I+ G+ YMAPE
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLGS--GI-KLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 435 Y--AMHGQFSV---KSDVYSFGVLVLEIITG 460
A + S+ + D++S GV++ +++G
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,250,749
Number of Sequences: 62578
Number of extensions: 470118
Number of successful extensions: 3654
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 244
Number of HSP's that attempted gapping in prelim test: 1206
Number of HSP's gapped (non-prelim): 1324
length of query: 470
length of database: 14,973,337
effective HSP length: 102
effective length of query: 368
effective length of database: 8,590,381
effective search space: 3161260208
effective search space used: 3161260208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)