BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041438
(752 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/377 (33%), Positives = 171/377 (45%), Gaps = 56/377 (14%)
Query: 111 LAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXXXXRNQLN 170
L L L NN IPP +SN S+L L N LSG IPS N L
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 455
Query: 171 GSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKS 230
G IP E+ + L LILD N L G IP LSN TNL ++ L NN +G IP+ IG L++
Sbjct: 456 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 515
Query: 231 LFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNY 290
L +KL N +G IP + G C L LD++ N G IP + + Q +++N+
Sbjct: 516 LAILKLSNNSFSGNIPAEL--GDCRSLIWLDLNTNLFNGTIPAAMFK----QSGKIAANF 569
Query: 291 IVGEIPTQL------------GNIIYLNRI-SLSGNKLSGRIPGELGSLI---------- 327
I G+ + GN++ I S N+LS R P + S +
Sbjct: 570 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFD 629
Query: 328 ---NLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSH 384
++ +LD+S N LS ++ + +GS+ L+ LNL HN +S IP E+ +L L+ LDLS
Sbjct: 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 689
Query: 385 NFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPNSTT 444
N L G IP+ L L ID+S N L G IP
Sbjct: 690 N------------------------KLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQ 725
Query: 445 FRDAPLEALQGNKGLCG 461
F P N GLCG
Sbjct: 726 FETFPPAKFLNNPGLCG 742
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 190/449 (42%), Gaps = 76/449 (16%)
Query: 89 INLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPP--------------------- 127
++L G + +F + L LDL N + +PP
Sbjct: 274 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 333
Query: 128 ----QISNLSKLEYLDFLTNKLSGHIP-SEXXXXXXXXXXXXXRNQLNGSIPHEVGQ--L 180
+ + L+ LD N+ SG +P S N +G I + Q
Sbjct: 334 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 393
Query: 181 NFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQ 240
N L L L +N G IP +LSN + LV L+L N SG+IP +G+L L D+KL +N
Sbjct: 394 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 453
Query: 241 LNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLG 300
L G IP + + + + +LD N++TG IP + L ++ LS+N + GEIP +G
Sbjct: 454 LEGEIPQELMYVKTLETLILD--FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 511
Query: 301 NIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHL----------------SNFV- 343
+ L + LS N SG IP ELG +L +LDL+ N +NF+
Sbjct: 512 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIA 571
Query: 344 ---------------LESLGSLVKLYYLNLSH-NKLSQQIPIEL-------------DNL 374
G+L++ + N+LS + P + DN
Sbjct: 572 GKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNN 631
Query: 375 IHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNK 434
+ LD+S+N L I I M L LNL +N++SG IP +L GL +D+S NK
Sbjct: 632 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691
Query: 435 LEGHIPNSTTFRDAPLEALQGNKGLCGDI 463
L+G IP + + E N L G I
Sbjct: 692 LDGRIPQAMSALTMLTEIDLSNNNLSGPI 720
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 163/334 (48%), Gaps = 7/334 (2%)
Query: 111 LAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXXXXRNQLN 170
L +LD+ N+L IS ++L+ L+ +N+ G IP N+
Sbjct: 225 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFT 282
Query: 171 GSIPHEV-GQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQ-IGNL 228
G IP + G + L L L N G++P + + L L L +N+FSG +P + +
Sbjct: 283 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 342
Query: 229 KSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQ--LQYLDL 286
+ L + L N+ +G +P S+ L LD+S NN +G I + ++P+ LQ L L
Sbjct: 343 RGLKVLDLSFNEFSGELPESLT-NLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYL 401
Query: 287 SSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLES 346
+N G+IP L N L + LS N LSG IP LGSL L L L N L + +
Sbjct: 402 QNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQE 461
Query: 347 LGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNL 406
L + L L L N L+ +IP L N +L+ + LS+N L +I I R+E+L L L
Sbjct: 462 LMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKL 521
Query: 407 SYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIP 440
S N+ SG IP + L+ +D++ N G IP
Sbjct: 522 SNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 156/341 (45%), Gaps = 5/341 (1%)
Query: 104 SFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPS-EXXXXXXXXXX 162
+ S+ L L++ +N+ IPP L L+YL NK +G IP
Sbjct: 242 AISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGL 299
Query: 163 XXXRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPR-SLSNFTNLVFLYLYNNSFSGSI 221
N G++P G + L L L SN G +P +L L L L N FSG +
Sbjct: 300 DLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGEL 359
Query: 222 PQQIGNLK-SLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQ 280
P+ + NL SL + L N +G I ++ L L + N TG IP + +
Sbjct: 360 PESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSE 419
Query: 281 LQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLS 340
L L LS NY+ G IP+ LG++ L + L N L G IP EL + LE L L N L+
Sbjct: 420 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLT 479
Query: 341 NFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMES 400
+ L + L +++LS+N+L+ +IP + L +L+ L LS+N I + + S
Sbjct: 480 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRS 539
Query: 401 LEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPN 441
L L+L+ N +G IP + G + + K +I N
Sbjct: 540 LIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKN 580
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 169/401 (42%), Gaps = 91/401 (22%)
Query: 76 SGIHCNHAGRVFGINLTSISLNGTLLEF-SFSSFPHLAYLDLYNNELFDIIPPQISN--- 131
SG C + + ++L+ SL+G + S S L +L++ +N L P ++S
Sbjct: 94 SGFKC--SASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--DFPGKVSGGLK 149
Query: 132 LSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXXXXRNQLNGSIPHEVGQLNFLNHLILDSN 191
L+ LE LD N +SG N + + G+L HL + N
Sbjct: 150 LNSLEVLDLSANSISG------------------ANVVGWVLSDGCGELK---HLAISGN 188
Query: 192 FLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDW 251
+ G + +S NL FL + +N+FS IP
Sbjct: 189 KISGDV--DVSRCVNLEFLDVSSNNFSTGIPF---------------------------L 219
Query: 252 GRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPT-QLGNIIYLNRISL 310
G C L LD+S N ++G+ I +L+ L++SSN VG IP L ++ YL SL
Sbjct: 220 GDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYL---SL 276
Query: 311 SGNKLSGRIPGEL-GSLINLEYLDLSANHLSNFV-------------------------L 344
+ NK +G IP L G+ L LDLS NH V +
Sbjct: 277 AENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPM 336
Query: 345 ESLGSLVKLYYLNLSHNKLSQQIPIELDNL-IHLSELDLSHNFLGEKISSRICR--MESL 401
++L + L L+LS N+ S ++P L NL L LDLS N I +C+ +L
Sbjct: 337 DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 396
Query: 402 EKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPNS 442
++L L N +G IP L+ + +S+N L G IP+S
Sbjct: 397 QELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSS 437
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/377 (33%), Positives = 171/377 (45%), Gaps = 56/377 (14%)
Query: 111 LAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXXXXRNQLN 170
L L L NN IPP +SN S+L L N LSG IPS N L
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 452
Query: 171 GSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKS 230
G IP E+ + L LILD N L G IP LSN TNL ++ L NN +G IP+ IG L++
Sbjct: 453 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 512
Query: 231 LFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNY 290
L +KL N +G IP + G C L LD++ N G IP + + Q +++N+
Sbjct: 513 LAILKLSNNSFSGNIPAEL--GDCRSLIWLDLNTNLFNGTIPAAMFK----QSGKIAANF 566
Query: 291 IVGEIPTQL------------GNIIYLNRI-SLSGNKLSGRIPGELGSLI---------- 327
I G+ + GN++ I S N+LS R P + S +
Sbjct: 567 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFD 626
Query: 328 ---NLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSH 384
++ +LD+S N LS ++ + +GS+ L+ LNL HN +S IP E+ +L L+ LDLS
Sbjct: 627 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 686
Query: 385 NFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPNSTT 444
N L G IP+ L L ID+S N L G IP
Sbjct: 687 N------------------------KLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQ 722
Query: 445 FRDAPLEALQGNKGLCG 461
F P N GLCG
Sbjct: 723 FETFPPAKFLNNPGLCG 739
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 190/449 (42%), Gaps = 76/449 (16%)
Query: 89 INLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPP--------------------- 127
++L G + +F + L LDL N + +PP
Sbjct: 271 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 330
Query: 128 ----QISNLSKLEYLDFLTNKLSGHIP-SEXXXXXXXXXXXXXRNQLNGSIPHEVGQ--L 180
+ + L+ LD N+ SG +P S N +G I + Q
Sbjct: 331 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 390
Query: 181 NFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQ 240
N L L L +N G IP +LSN + LV L+L N SG+IP +G+L L D+KL +N
Sbjct: 391 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 450
Query: 241 LNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLG 300
L G IP + + + + +LD N++TG IP + L ++ LS+N + GEIP +G
Sbjct: 451 LEGEIPQELMYVKTLETLILD--FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 508
Query: 301 NIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHL----------------SNFV- 343
+ L + LS N SG IP ELG +L +LDL+ N +NF+
Sbjct: 509 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIA 568
Query: 344 ---------------LESLGSLVKLYYLNLSH-NKLSQQIPIEL-------------DNL 374
G+L++ + N+LS + P + DN
Sbjct: 569 GKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNN 628
Query: 375 IHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNK 434
+ LD+S+N L I I M L LNL +N++SG IP +L GL +D+S NK
Sbjct: 629 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 688
Query: 435 LEGHIPNSTTFRDAPLEALQGNKGLCGDI 463
L+G IP + + E N L G I
Sbjct: 689 LDGRIPQAMSALTMLTEIDLSNNNLSGPI 717
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 163/334 (48%), Gaps = 7/334 (2%)
Query: 111 LAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXXXXRNQLN 170
L +LD+ N+L IS ++L+ L+ +N+ G IP N+
Sbjct: 222 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFT 279
Query: 171 GSIPHEV-GQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQ-IGNL 228
G IP + G + L L L N G++P + + L L L +N+FSG +P + +
Sbjct: 280 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 339
Query: 229 KSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQ--LQYLDL 286
+ L + L N+ +G +P S+ L LD+S NN +G I + ++P+ LQ L L
Sbjct: 340 RGLKVLDLSFNEFSGELPESLT-NLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYL 398
Query: 287 SSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLES 346
+N G+IP L N L + LS N LSG IP LGSL L L L N L + +
Sbjct: 399 QNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQE 458
Query: 347 LGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNL 406
L + L L L N L+ +IP L N +L+ + LS+N L +I I R+E+L L L
Sbjct: 459 LMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKL 518
Query: 407 SYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIP 440
S N+ SG IP + L+ +D++ N G IP
Sbjct: 519 SNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 156/341 (45%), Gaps = 5/341 (1%)
Query: 104 SFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPS-EXXXXXXXXXX 162
+ S+ L L++ +N+ IPP L L+YL NK +G IP
Sbjct: 239 AISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGL 296
Query: 163 XXXRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPR-SLSNFTNLVFLYLYNNSFSGSI 221
N G++P G + L L L SN G +P +L L L L N FSG +
Sbjct: 297 DLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGEL 356
Query: 222 PQQIGNLK-SLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQ 280
P+ + NL SL + L N +G I ++ L L + N TG IP + +
Sbjct: 357 PESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSE 416
Query: 281 LQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLS 340
L L LS NY+ G IP+ LG++ L + L N L G IP EL + LE L L N L+
Sbjct: 417 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLT 476
Query: 341 NFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMES 400
+ L + L +++LS+N+L+ +IP + L +L+ L LS+N I + + S
Sbjct: 477 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRS 536
Query: 401 LEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPN 441
L L+L+ N +G IP + G + + K +I N
Sbjct: 537 LIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKN 577
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 169/401 (42%), Gaps = 91/401 (22%)
Query: 76 SGIHCNHAGRVFGINLTSISLNGTLLEF-SFSSFPHLAYLDLYNNELFDIIPPQISN--- 131
SG C + + ++L+ SL+G + S S L +L++ +N L P ++S
Sbjct: 91 SGFKC--SASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--DFPGKVSGGLK 146
Query: 132 LSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXXXXRNQLNGSIPHEVGQLNFLNHLILDSN 191
L+ LE LD N +SG N + + G+L HL + N
Sbjct: 147 LNSLEVLDLSANSISG------------------ANVVGWVLSDGCGELK---HLAISGN 185
Query: 192 FLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDW 251
+ G + +S NL FL + +N+FS IP
Sbjct: 186 KISGDV--DVSRCVNLEFLDVSSNNFSTGIPF---------------------------L 216
Query: 252 GRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPT-QLGNIIYLNRISL 310
G C L LD+S N ++G+ I +L+ L++SSN VG IP L ++ YL SL
Sbjct: 217 GDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYL---SL 273
Query: 311 SGNKLSGRIPGEL-GSLINLEYLDLSANHLSNFV-------------------------L 344
+ NK +G IP L G+ L LDLS NH V +
Sbjct: 274 AENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPM 333
Query: 345 ESLGSLVKLYYLNLSHNKLSQQIPIELDNL-IHLSELDLSHNFLGEKISSRICR--MESL 401
++L + L L+LS N+ S ++P L NL L LDLS N I +C+ +L
Sbjct: 334 DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 393
Query: 402 EKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPNS 442
++L L N +G IP L+ + +S+N L G IP+S
Sbjct: 394 QELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSS 434
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 129/283 (45%), Gaps = 37/283 (13%)
Query: 488 LGKIVYEEIIRATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPDN------- 540
L + E+ A+++F K+ +G+GG G VY R+ G + AVK+
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 541 ------------------FCSHPRQSFIVYEYLESGSLDKILNNDASAKE-LGWTQRLNV 581
FC P + +VY Y+ +GS+ L ++ L W +R +
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 582 IKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL-DSSNWSKLA 640
G A L YLH++C P I+H D+ + N+LLD +EA V DF +AK ++ D +
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 204
Query: 641 GTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDXXXXXXXXXXX----XXXXX 696
GT G++APE T K +EK DV+ +GV+ LE+I G+ D
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 264
Query: 697 XDSRL-PYPSLDVQNKFM-----SIMQVAFSCLDQNPVSRPTM 733
+ +L +D+Q + ++QVA C +P+ RP M
Sbjct: 265 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 307
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 128/283 (45%), Gaps = 37/283 (13%)
Query: 488 LGKIVYEEIIRATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPDN------- 540
L + E+ A+++F K+ +G+GG G VY R+ G + AVK+
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 541 ------------------FCSHPRQSFIVYEYLESGSLDKILNNDASAKE-LGWTQRLNV 581
FC P + +VY Y+ +GS+ L ++ L W +R +
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 582 IKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL-DSSNWSKLA 640
G A L YLH++C P I+H D+ + N+LLD +EA V DF +AK ++ D +
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 196
Query: 641 GTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDXXXXXXXXXXX----XXXXX 696
G G++APE T K +EK DV+ +GV+ LE+I G+ D
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256
Query: 697 XDSRL-PYPSLDVQNKFM-----SIMQVAFSCLDQNPVSRPTM 733
+ +L +D+Q + ++QVA C +P+ RP M
Sbjct: 257 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 299
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 100/203 (49%), Gaps = 32/203 (15%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-------------NFCSHP 545
ATN+FD K IG G G VY + G A+K+ +P +FC HP
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETEIETLSFCRHP 95
Query: 546 R------------QSFIVYEYLESGSLDKIL-NNDASAKELGWTQRLNVIKGVADALFYL 592
+ ++Y+Y+E+G+L + L +D + W QRL + G A L YL
Sbjct: 96 HLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL 155
Query: 593 HNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKF-LNLDSSNWSKLA-GTHGNVAPEL 650
H I+H D+ S N+LLD + ++DF I+K LD ++ + GT G + PE
Sbjct: 156 HTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEY 212
Query: 651 AYTMKVTEKCDVYSFGVLALEVI 673
++TEK DVYSFGV+ EV+
Sbjct: 213 FIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 99/203 (48%), Gaps = 32/203 (15%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-------------NFCSHP 545
ATN+FD K IG G G VY + G A+K+ +P +FC HP
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETEIETLSFCRHP 95
Query: 546 R------------QSFIVYEYLESGSLDKIL-NNDASAKELGWTQRLNVIKGVADALFYL 592
+ ++Y+Y+E+G+L + L +D + W QRL + G A L YL
Sbjct: 96 HLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL 155
Query: 593 HNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKF-LNLDSSNWSKLA-GTHGNVAPEL 650
H I+H D+ S N+LLD + ++DF I+K L ++ + GT G + PE
Sbjct: 156 HTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEY 212
Query: 651 AYTMKVTEKCDVYSFGVLALEVI 673
++TEK DVYSFGV+ EV+
Sbjct: 213 FIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 111/241 (46%), Gaps = 26/241 (10%)
Query: 246 PLSIDWGRCPQLSLLDVS-INNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIY 304
P+ P L+ L + INN+ G IP I + QL YL ++ + G IP L I
Sbjct: 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 305 LNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYY-LNLSHNKL 363
L + S N LSG +P + SL NL + N +S + +S GS KL+ + +S N+L
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 364 SQQIPIELDNLIHLSELDLSHNFLGEKIS-----------------------SRICRMES 400
+ +IP NL +L+ +DLS N L S ++ ++
Sbjct: 187 TGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKN 245
Query: 401 LEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPNSTTFRDAPLEALQGNKGLC 460
L L+L N + G +P+ +L L +++S+N L G IP + + A NK LC
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLC 305
Query: 461 G 461
G
Sbjct: 306 G 306
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 5/203 (2%)
Query: 167 NQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIG 226
N L G IP + +L L++L + + G+IP LS LV L N+ SG++P I
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 227 NLKSLFDMKLCINQLNGAIPLSIDWGRCPQL-SLLDVSINNITGNIPFEIGESPQLQYLD 285
+L +L + N+++GAIP S +G +L + + +S N +TG IP L ++D
Sbjct: 147 SLPNLVGITFDGNRISGAIPDS--YGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVD 203
Query: 286 LSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLE 345
LS N + G+ G+ +I L+ N L+ + G++G NL LDL N + + +
Sbjct: 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQ 262
Query: 346 SLGSLVKLYYLNLSHNKLSQQIP 368
L L L+ LN+S N L +IP
Sbjct: 263 GLTQLKFLHSLNVSFNNLCGEIP 285
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 92/203 (45%), Gaps = 28/203 (13%)
Query: 502 DFDAKHCIGKGGHGSVYIARVPSGEIFAVK-----KFHSPLPDNF--------------- 541
D + K IG G G+V+ A G AVK FH+ + F
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 542 ------CSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNN 595
+ P IV EYL GSL ++L+ + ++L +RL++ VA + YLHN
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 596 CFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMK 655
PPIVH D+ S N+L+D Y V DF +++ AGT +APE+
Sbjct: 157 N-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEP 215
Query: 656 VTEKCDVYSFGVLALEVIKGKHP 678
EK DVYSFGV+ E+ + P
Sbjct: 216 SNEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 93/203 (45%), Gaps = 28/203 (13%)
Query: 502 DFDAKHCIGKGGHGSVYIARVPSGEIFAVK-----KFHSPLPDNF--------------- 541
D + K IG G G+V+ A G AVK FH+ + F
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 542 ------CSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNN 595
+ P IV EYL GSL ++L+ + ++L +RL++ VA + YLHN
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 596 CFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMK 655
PPIVH ++ S N+L+D Y V DF +++ + AGT +APE+
Sbjct: 157 N-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEP 215
Query: 656 VTEKCDVYSFGVLALEVIKGKHP 678
EK DVYSFGV+ E+ + P
Sbjct: 216 SNEKSDVYSFGVILWELATLQQP 238
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 43/220 (19%)
Query: 493 YEEIIRATNDFDAK------HCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPDNFCSHPR 546
+ E+ TN+FD + + +G+GG G VY V + + AVKK + + D +
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKL-AAMVDITTEELK 74
Query: 547 QSF-----------------------------IVYEYLESGSLDKILNNDASAKELGWTQ 577
Q F +VY Y+ +GSL L+ L W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 578 RLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN--LDSSN 635
R + +G A+ + +LH N +H DI S N+LLD + A +SDF +A+ +
Sbjct: 135 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 636 WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKG 675
S++ GT +APE A ++T K D+YSFGV+ LE+I G
Sbjct: 192 XSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 101/220 (45%), Gaps = 43/220 (19%)
Query: 493 YEEIIRATNDFDAK------HCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPDNFCSHPR 546
+ E+ TN+FD + + +G+GG G VY V + + AVKK + + D +
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKL-AAMVDITTEELK 74
Query: 547 QSF-----------------------------IVYEYLESGSLDKILNNDASAKELGWTQ 577
Q F +VY Y+ +GSL L+ L W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 578 RLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN--LDSSN 635
R + +G A+ + +LH N +H DI S N+LLD + A +SDF +A+ +
Sbjct: 135 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 636 WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKG 675
++ GT +APE A ++T K D+YSFGV+ LE+I G
Sbjct: 192 XXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 101/220 (45%), Gaps = 43/220 (19%)
Query: 493 YEEIIRATNDFDAK------HCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPDNFCSHPR 546
+ E+ TN+FD + + +G+GG G VY V + + AVKK + + D +
Sbjct: 11 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKL-AAMVDITTEELK 68
Query: 547 QSF-----------------------------IVYEYLESGSLDKILNNDASAKELGWTQ 577
Q F +VY Y+ +GSL L+ L W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 578 RLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN-- 635
R + +G A+ + +LH N +H DI S N+LLD + A +SDF +A+ +
Sbjct: 129 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVM 185
Query: 636 WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKG 675
++ GT +APE A ++T K D+YSFGV+ LE+I G
Sbjct: 186 XXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 98/220 (44%), Gaps = 43/220 (19%)
Query: 493 YEEIIRATNDFDAK------HCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPDNFCSHPR 546
+ E+ TN+FD + + G+GG G VY V + + AVKK + + D +
Sbjct: 8 FYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTV-AVKKL-AAMVDITTEELK 65
Query: 547 QSF-----------------------------IVYEYLESGSLDKILNNDASAKELGWTQ 577
Q F +VY Y +GSL L+ L W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 578 RLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN--LDSSN 635
R + +G A+ + +LH N +H DI S N+LLD + A +SDF +A+
Sbjct: 126 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 636 WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKG 675
S++ GT APE A ++T K D+YSFGV+ LE+I G
Sbjct: 183 XSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 44/201 (21%)
Query: 509 IGKGGHGSVYIAR-VPSGEIFAVKKFHSPLPDNFCSHPRQSFI----------------- 550
IG+G G+VY A V +G+ A+++ N P++ I
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM------NLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 551 -------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF 597
V EYL GSL ++ + Q V + AL +LH+N
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSN-- 135
Query: 598 PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVT 657
++H DI S N+LL + ++DF + + S S++ GT +APE+
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYG 194
Query: 658 EKCDVYSFGVLALEVIKGKHP 678
K D++S G++A+E+I+G+ P
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPP 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 44/201 (21%)
Query: 509 IGKGGHGSVYIAR-VPSGEIFAVKKFHSPLPDNFCSHPRQSFI----------------- 550
IG+G G+VY A V +G+ A+++ N P++ I
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM------NLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 551 -------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF 597
V EYL GSL ++ + Q V + AL +LH+N
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSN-- 135
Query: 598 PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVT 657
++H DI S N+LL + ++DF + + S S + GT +APE+
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 194
Query: 658 EKCDVYSFGVLALEVIKGKHP 678
K D++S G++A+E+I+G+ P
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 44/201 (21%)
Query: 509 IGKGGHGSVYIAR-VPSGEIFAVKKFHSPLPDNFCSHPRQSFI----------------- 550
IG+G G+VY A V +G+ A+++ N P++ I
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQM------NLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 551 -------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF 597
V EYL GSL ++ + Q V + AL +LH+N
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSN-- 136
Query: 598 PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVT 657
++H DI S N+LL + ++DF + + S S + GT +APE+
Sbjct: 137 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYG 195
Query: 658 EKCDVYSFGVLALEVIKGKHP 678
K D++S G++A+E+I+G+ P
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 44/201 (21%)
Query: 509 IGKGGHGSVYIAR-VPSGEIFAVKKFHSPLPDNFCSHPRQSFI----------------- 550
IG+G G+VY A V +G+ A+++ N P++ I
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM------NLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 551 -------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF 597
V EYL GSL ++ + Q V + AL +LH+N
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSN-- 135
Query: 598 PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVT 657
++H DI S N+LL + ++DF + + S S + GT +APE+
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYG 194
Query: 658 EKCDVYSFGVLALEVIKGKHP 678
K D++S G++A+E+I+G+ P
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 44/201 (21%)
Query: 509 IGKGGHGSVYIAR-VPSGEIFAVKKFHSPLPDNFCSHPRQSFI----------------- 550
IG+G G+VY A V +G+ A+++ N P++ I
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQM------NLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 551 -------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF 597
V EYL GSL ++ + Q V + AL +LH+N
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSN-- 136
Query: 598 PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVT 657
++H +I S N+LL + ++DF + + S S + GT +APE+
Sbjct: 137 -QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 195
Query: 658 EKCDVYSFGVLALEVIKGKHP 678
K D++S G++A+E+I+G+ P
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPP 216
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 21/190 (11%)
Query: 549 FIVYEYLESGSLDKIL-NNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
I+ E++E+GSLD L ND + Q + +++G+A + YL + + VH D+++
Sbjct: 110 MIITEFMENGSLDSFLRQNDG---QFTVIQLVGMLRGIAAGMKYLADMNY---VHRDLAA 163
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-----APELAYTMKVTEKCDV 662
+N+L++ VSDF +++FL D+S+ + + G + APE K T DV
Sbjct: 164 RNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDV 223
Query: 663 YSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFS 721
+S+G++ EV+ G+ P D RLP P +D + ++ Q+
Sbjct: 224 WSYGIVMWEVMSYGERP----YWDMTNQDVINAIEQDYRLP-PPMDCPS---ALHQLMLD 275
Query: 722 CLDQNPVSRP 731
C ++ RP
Sbjct: 276 CWQKDRNHRP 285
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 144/309 (46%), Gaps = 52/309 (16%)
Query: 110 HLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXXXXRNQL 169
+L ++ NN+L DI P + NL+KL +D L N NQ+
Sbjct: 64 NLTQINFSNNQLTDITP--LKNLTKL--VDILMN----------------------NNQI 97
Query: 170 NGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLK 229
P + L L L L +N + P L N TNL L L +N+ S + L
Sbjct: 98 ADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLT 151
Query: 230 SLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLD--LS 287
SL + NQ+ PL L LD+S N ++ +I +L L+ ++
Sbjct: 152 SLQQLSFSSNQVTDLKPL----ANLTTLERLDISSNKVS-----DISVLAKLTNLESLIA 202
Query: 288 SNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESL 347
+N + +I T LG + L+ +SL+GN+L + G L SL NL LDL+ N +SN L L
Sbjct: 203 TNNQISDI-TPLGILTNLDELSLNGNQL--KDIGTLASLTNLTDLDLANNQISN--LAPL 257
Query: 348 GSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLS 407
L KL L L N++S P L L L+ L+L+ N L E IS I +++L L L
Sbjct: 258 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDISP-ISNLKNLTYLTLY 313
Query: 408 YNNLSGLIP 416
+NN+S + P
Sbjct: 314 FNNISDISP 322
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 126/281 (44%), Gaps = 46/281 (16%)
Query: 104 SFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXX 163
+ S L L +N++ D+ P ++NL+ LE LD +NK+S S
Sbjct: 146 ALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLI 201
Query: 164 XXRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQ 223
NQ++ P +G L L+ L L+ N L +L++ TNL L L NN S P
Sbjct: 202 ATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP- 256
Query: 224 QIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQY 283
+ L L ++KL NQ++ PL+ +T E+ E+ QL+
Sbjct: 257 -LSGLTKLTELKLGANQISNISPLA-----------------GLTALTNLELNEN-QLED 297
Query: 284 LDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFV 343
+ SN L N+ YL +L N +S P + SL L+ L S N +S+
Sbjct: 298 ISPISN---------LKNLTYL---TLYFNNISDISP--VSSLTKLQRLFFSNNKVSD-- 341
Query: 344 LESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSH 384
+ SL +L + +L+ HN++S P L NL +++L L+
Sbjct: 342 VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLND 380
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 145/309 (46%), Gaps = 52/309 (16%)
Query: 110 HLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXXXXRNQL 169
+L ++ NN+L DI P + NL+KL +D L N NQ+
Sbjct: 64 NLTQINFSNNQLTDITP--LKNLTKL--VDILMN----------------------NNQI 97
Query: 170 NGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLK 229
P + L L L L +N + P L N TNL L L +N+ S + L
Sbjct: 98 ADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLT 151
Query: 230 SLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLD--LS 287
SL + NQ+ PL+ L LD+S N ++ +I +L L+ ++
Sbjct: 152 SLQQLNFSSNQVTDLKPLA----NLTTLERLDISSNKVS-----DISVLAKLTNLESLIA 202
Query: 288 SNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESL 347
+N + +I T LG + L+ +SL+GN+L + G L SL NL LDL+ N +SN L L
Sbjct: 203 TNNQISDI-TPLGILTNLDELSLNGNQL--KDIGTLASLTNLTDLDLANNQISN--LAPL 257
Query: 348 GSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLS 407
L KL L L N++S P L L L+ L+L+ N L E IS I +++L L L
Sbjct: 258 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDISP-ISNLKNLTYLTLY 313
Query: 408 YNNLSGLIP 416
+NN+S + P
Sbjct: 314 FNNISDISP 322
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 126/281 (44%), Gaps = 46/281 (16%)
Query: 104 SFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXX 163
+ S L L+ +N++ D+ P ++NL+ LE LD +NK+S S
Sbjct: 146 ALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLI 201
Query: 164 XXRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQ 223
NQ++ P +G L L+ L L+ N L +L++ TNL L L NN S P
Sbjct: 202 ATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP- 256
Query: 224 QIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQY 283
+ L L ++KL NQ++ PL+ +T E+ E+ QL+
Sbjct: 257 -LSGLTKLTELKLGANQISNISPLA-----------------GLTALTNLELNEN-QLED 297
Query: 284 LDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFV 343
+ SN L N+ YL +L N +S P + SL L+ L N +S+
Sbjct: 298 ISPISN---------LKNLTYL---TLYFNNISDISP--VSSLTKLQRLFFYNNKVSD-- 341
Query: 344 LESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSH 384
+ SL +L + +L+ HN++S P L NL +++L L+
Sbjct: 342 VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLND 380
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 144/309 (46%), Gaps = 52/309 (16%)
Query: 110 HLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXXXXRNQL 169
+L ++ NN+L DI P + NL+KL +D L N NQ+
Sbjct: 64 NLTQINFSNNQLTDITP--LKNLTKL--VDILMN----------------------NNQI 97
Query: 170 NGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLK 229
P + L L L L +N + P L N TNL L L +N+ S + L
Sbjct: 98 ADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLT 151
Query: 230 SLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLD--LS 287
SL + NQ+ PL L LD+S N ++ +I +L L+ ++
Sbjct: 152 SLQQLSFSSNQVTDLKPL----ANLTTLERLDISSNKVS-----DISVLAKLTNLESLIA 202
Query: 288 SNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESL 347
+N + +I T LG + L+ +SL+GN+L + G L SL NL LDL+ N +SN L L
Sbjct: 203 TNNQISDI-TPLGILTNLDELSLNGNQL--KDIGTLASLTNLTDLDLANNQISN--LAPL 257
Query: 348 GSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLS 407
L KL L L N++S P L L L+ L+L+ N L E IS I +++L L L
Sbjct: 258 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDISP-ISNLKNLTYLTLY 313
Query: 408 YNNLSGLIP 416
+NN+S + P
Sbjct: 314 FNNISDISP 322
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 125/281 (44%), Gaps = 46/281 (16%)
Query: 104 SFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXX 163
+ S L L +N++ D+ P ++NL+ LE LD +NK+S S
Sbjct: 146 ALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLI 201
Query: 164 XXRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQ 223
NQ++ P +G L L+ L L+ N L +L++ TNL L L NN S P
Sbjct: 202 ATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP- 256
Query: 224 QIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQY 283
+ L L ++KL NQ++ PL+ +T E+ E+ QL+
Sbjct: 257 -LSGLTKLTELKLGANQISNISPLA-----------------GLTALTNLELNEN-QLED 297
Query: 284 LDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFV 343
+ SN L N+ YL +L N +S P + SL L+ L N +S+
Sbjct: 298 ISPISN---------LKNLTYL---TLYFNNISDISP--VSSLTKLQRLFFYNNKVSD-- 341
Query: 344 LESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSH 384
+ SL +L + +L+ HN++S P L NL +++L L+
Sbjct: 342 VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLND 380
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 17/187 (9%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
I+ EY+E+G+LDK L E Q + +++G+A + YL N + VH D++++
Sbjct: 122 MIITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYLANMNY---VHRDLAAR 176
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L++ VSDF +++ L D +G + APE K T DV+SF
Sbjct: 177 NILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 236
Query: 666 GVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLD 724
G++ EV+ G+ P RLP P +D + +I Q+ C
Sbjct: 237 GIVMWEVMTYGERP----YWELSNHEVMKAINDGFRLPTP-MDCPS---AIYQLMMQCWQ 288
Query: 725 QNPVSRP 731
Q RP
Sbjct: 289 QERARRP 295
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 19/198 (9%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIV 601
CS +IV EY+ +G L L + K L +Q L + V + + +L ++ F +
Sbjct: 72 CSKEYPIYIVTEYISNGCLLNYLR--SHGKGLEPSQLLEMCYDVCEGMAFLESHQF---I 126
Query: 602 HWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTE 658
H D++++N L+D VSDF + +++ LD S + GT V APE+ + K +
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYV-LDDQYVSSV-GTKFPVKWSAPEVFHYFKYSS 184
Query: 659 KCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQ 717
K DV++FG+L EV GK P D RL P L +I Q
Sbjct: 185 KSDVWAFGILMWEVFSLGKMPYD----LYTNSEVVLKVSQGHRLYRPHLASD----TIYQ 236
Query: 718 VAFSCLDQNPVSRPTMKR 735
+ +SC + P RPT ++
Sbjct: 237 IMYSCWHELPEKRPTFQQ 254
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 21/190 (11%)
Query: 549 FIVYEYLESGSLDKILN-NDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
I+ E++E+G+LD L ND + Q + +++G+A + YL + VH D+++
Sbjct: 93 MILTEFMENGALDSFLRLNDG---QFTVIQLVGMLRGIASGMRYLAEMSY---VHRDLAA 146
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-----APELAYTMKVTEKCDV 662
+N+L++ VSDF +++FL +SS+ ++ + G + APE K T D
Sbjct: 147 RNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDA 206
Query: 663 YSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFS 721
+S+G++ EV+ G+ P D RLP P + S+ Q+
Sbjct: 207 WSYGIVMWEVMSFGERP----YWDMSNQDVINAIEQDYRLPPPP----DCPTSLHQLMLD 258
Query: 722 CLDQNPVSRP 731
C ++ +RP
Sbjct: 259 CWQKDRNARP 268
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 92/190 (48%), Gaps = 21/190 (11%)
Query: 549 FIVYEYLESGSLDKIL-NNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
I+ E++E+GSLD L ND + Q + +++G+A + YL + + VH +++
Sbjct: 84 MIITEFMENGSLDSFLRQNDG---QFTVIQLVGMLRGIAAGMKYLADMNY---VHRALAA 137
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-----APELAYTMKVTEKCDV 662
+N+L++ VSDF +++FL D+S+ + + G + APE K T DV
Sbjct: 138 RNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDV 197
Query: 663 YSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFS 721
+S+G++ EV+ G+ P D RLP P +D + ++ Q+
Sbjct: 198 WSYGIVMWEVMSYGERP----YWDMTNQDVINAIEQDYRLP-PPMDCPS---ALHQLMLD 249
Query: 722 CLDQNPVSRP 731
C ++ RP
Sbjct: 250 CWQKDRNHRP 259
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 134/270 (49%), Gaps = 39/270 (14%)
Query: 166 RNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQI 225
NQL P + L L +++++N + P L+N TNL L L+NN + P +
Sbjct: 72 NNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--L 125
Query: 226 GNLKSLFDMKLCINQLNGAIPLS-------IDWGR----------CPQLSLLDVSINNIT 268
NL +L ++L N ++ LS +++G L LD+S N ++
Sbjct: 126 KNLTNLNRLELSSNTISDISALSGLTSLQQLNFGNQVTDLKPLANLTTLERLDISSNKVS 185
Query: 269 GNIPFEIGESPQLQYLD--LSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSL 326
+I +L L+ +++N + +I T LG + L+ +SL+GN+L + G L SL
Sbjct: 186 -----DISVLAKLTNLESLIATNNQISDI-TPLGILTNLDELSLNGNQL--KDIGTLASL 237
Query: 327 INLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNF 386
NL LDL+ N +SN L L L KL L L N++S P L L L+ L+L+ N
Sbjct: 238 TNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQ 293
Query: 387 LGEKISSRICRMESLEKLNLSYNNLSGLIP 416
L E IS I +++L L L +NN+S + P
Sbjct: 294 L-EDISP-ISNLKNLTYLTLYFNNISDISP 321
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 126/281 (44%), Gaps = 47/281 (16%)
Query: 104 SFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXX 163
+ S L L+ + N++ D+ P ++NL+ LE LD +NK+S S
Sbjct: 146 ALSGLTSLQQLN-FGNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLI 200
Query: 164 XXRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQ 223
NQ++ P +G L L+ L L+ N L +L++ TNL L L NN S P
Sbjct: 201 ATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP- 255
Query: 224 QIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQY 283
+ L L ++KL NQ++ PL+ +T E+ E+ QL+
Sbjct: 256 -LSGLTKLTELKLGANQISNISPLA-----------------GLTALTNLELNEN-QLED 296
Query: 284 LDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFV 343
+ SN L N+ YL +L N +S P + SL L+ L N +S+
Sbjct: 297 ISPISN---------LKNLTYL---TLYFNNISDISP--VSSLTKLQRLFFYNNKVSD-- 340
Query: 344 LESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSH 384
+ SL +L + +L+ HN++S P L NL +++L L+
Sbjct: 341 VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLND 379
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 13/174 (7%)
Query: 90 NLTSISLNGTLLE--FSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSG 147
NL +SLNG L+ + +S +L LDL NN++ ++ P +S L+KL L N++S
Sbjct: 217 NLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 274
Query: 148 HIPSEXXXXXXXXXXXXXRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNL 207
P NQL P + L L +L L N + P +S+ T L
Sbjct: 275 ISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKL 328
Query: 208 VFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLD 261
L+ YNN S + NL ++ + NQ++ PL+ + R QL L D
Sbjct: 329 QRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTPLA-NLTRITQLGLND 379
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 134/270 (49%), Gaps = 39/270 (14%)
Query: 166 RNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQI 225
NQL P + L L +++++N + P L+N TNL L L+NN + P +
Sbjct: 72 NNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--L 125
Query: 226 GNLKSLFDMKLCINQLNGAIPLS-------IDWGR----------CPQLSLLDVSINNIT 268
NL +L ++L N ++ LS +++G L LD+S N ++
Sbjct: 126 KNLTNLNRLELSSNTISDISALSGLTSLQQLNFGNQVTDLKPLANLTTLERLDISSNKVS 185
Query: 269 GNIPFEIGESPQLQYLD--LSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSL 326
+I +L L+ +++N + +I T LG + L+ +SL+GN+L + G L SL
Sbjct: 186 -----DISVLAKLTNLESLIATNNQISDI-TPLGILTNLDELSLNGNQL--KDIGTLASL 237
Query: 327 INLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNF 386
NL LDL+ N +SN L L L KL L L N++S P L L L+ L+L+ N
Sbjct: 238 TNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQ 293
Query: 387 LGEKISSRICRMESLEKLNLSYNNLSGLIP 416
L E IS I +++L L L +NN+S + P
Sbjct: 294 L-EDISP-ISNLKNLTYLTLYFNNISDISP 321
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 47/281 (16%)
Query: 104 SFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXX 163
+ S L L+ + N++ D+ P ++NL+ LE LD +NK+S S
Sbjct: 146 ALSGLTSLQQLN-FGNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLI 200
Query: 164 XXRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQ 223
NQ++ P +G L L+ L L+ N L +L++ TNL L L NN S P
Sbjct: 201 ATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP- 255
Query: 224 QIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQY 283
+ L L ++KL NQ++ PL+ +T E+ E+ QL+
Sbjct: 256 -LSGLTKLTELKLGANQISNISPLA-----------------GLTALTNLELNEN-QLED 296
Query: 284 LDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFV 343
+ SN L N+ YL +L N +S P + SL L+ L S N +S+
Sbjct: 297 ISPISN---------LKNLTYL---TLYFNNISDISP--VSSLTKLQRLFFSNNKVSD-- 340
Query: 344 LESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSH 384
+ SL +L + +L+ HN++S P L NL +++L L+
Sbjct: 341 VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLND 379
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 33/146 (22%)
Query: 90 NLTSISLNGTLLE--FSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSG 147
NL +SLNG L+ + +S +L LDL NN++ ++ P +S L+KL L N++S
Sbjct: 217 NLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 274
Query: 148 HIPSEXXXXXXXXXXXXXRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNL 207
P + L L +L L+ N L P +SN NL
Sbjct: 275 ISP--------------------------LAGLTALTNLELNENQLEDISP--ISNLKNL 306
Query: 208 VFLYLYNNSFSGSIP-QQIGNLKSLF 232
+L LY N+ S P + L+ LF
Sbjct: 307 TYLTLYFNNISDISPVSSLTKLQRLF 332
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 21/190 (11%)
Query: 549 FIVYEYLESGSLDKILN-NDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
I+ E++E+G+LD L ND + Q + +++G+A + YL + VH D+++
Sbjct: 91 MILTEFMENGALDSFLRLNDG---QFTVIQLVGMLRGIASGMRYLAEMSY---VHRDLAA 144
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-----APELAYTMKVTEKCDV 662
+N+L++ VSDF +++FL +SS+ + + G + APE K T D
Sbjct: 145 RNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDA 204
Query: 663 YSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFS 721
+S+G++ EV+ G+ P D RLP P + S+ Q+
Sbjct: 205 WSYGIVMWEVMSFGERP----YWDMSNQDVINAIEQDYRLPPPP----DCPTSLHQLMLD 256
Query: 722 CLDQNPVSRP 731
C ++ +RP
Sbjct: 257 CWQKDRNARP 266
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 133/270 (49%), Gaps = 39/270 (14%)
Query: 166 RNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQI 225
NQL P + L L +++++N + P L+N TNL L L+NN + P +
Sbjct: 76 NNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--L 129
Query: 226 GNLKSLFDMKLCINQLNGAIPLS-------IDWGR----------CPQLSLLDVSINNIT 268
NL +L ++L N ++ LS + +G L LD+S N ++
Sbjct: 130 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVS 189
Query: 269 GNIPFEIGESPQLQYLD--LSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSL 326
+I +L L+ +++N + +I T LG + L+ +SL+GN+L + G L SL
Sbjct: 190 -----DISVLAKLTNLESLIATNNQISDI-TPLGILTNLDELSLNGNQL--KDIGTLASL 241
Query: 327 INLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNF 386
NL LDL+ N +SN L L L KL L L N++S P L L L+ L+L+ N
Sbjct: 242 TNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQ 297
Query: 387 LGEKISSRICRMESLEKLNLSYNNLSGLIP 416
L E IS I +++L L L +NN+S + P
Sbjct: 298 L-EDISP-ISNLKNLTYLTLYFNNISDISP 325
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 46/268 (17%)
Query: 117 YNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXXXXRNQLNGSIPHE 176
+ N++ D+ P ++NL+ LE LD +NK+S S NQ++ P
Sbjct: 162 FGNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-- 215
Query: 177 VGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKL 236
+G L L+ L L+ N L +L++ TNL L L NN S P + L L ++KL
Sbjct: 216 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 271
Query: 237 CINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIP 296
NQ++ PL+ +T E+ E+ QL+ + SN
Sbjct: 272 GANQISNISPLA-----------------GLTALTNLELNEN-QLEDISPISN------- 306
Query: 297 TQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYL 356
L N+ YL +L N +S P + SL L+ L + N +S+ + SL +L + +L
Sbjct: 307 --LKNLTYL---TLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWL 357
Query: 357 NLSHNKLSQQIPIELDNLIHLSELDLSH 384
+ HN++S P L NL +++L L+
Sbjct: 358 SAGHNQISDLTP--LANLTRITQLGLND 383
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 33/146 (22%)
Query: 90 NLTSISLNGTLLE--FSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSG 147
NL +SLNG L+ + +S +L LDL NN++ ++ P +S L+KL L N++S
Sbjct: 221 NLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 278
Query: 148 HIPSEXXXXXXXXXXXXXRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNL 207
P + L L +L L+ N L P +SN NL
Sbjct: 279 ISP--------------------------LAGLTALTNLELNENQLEDISP--ISNLKNL 310
Query: 208 VFLYLYNNSFSGSIP-QQIGNLKSLF 232
+L LY N+ S P + L+ LF
Sbjct: 311 TYLTLYFNNISDISPVSSLTKLQRLF 336
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 133/270 (49%), Gaps = 39/270 (14%)
Query: 166 RNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQI 225
NQL P + L L +++++N + P L+N TNL L L+NN + P +
Sbjct: 77 NNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--L 130
Query: 226 GNLKSLFDMKLCINQLNGAIPLS-------IDWGR----------CPQLSLLDVSINNIT 268
NL +L ++L N ++ LS + +G L LD+S N ++
Sbjct: 131 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVS 190
Query: 269 GNIPFEIGESPQLQYLD--LSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSL 326
+I +L L+ +++N + +I T LG + L+ +SL+GN+L + G L SL
Sbjct: 191 -----DISVLAKLTNLESLIATNNQISDI-TPLGILTNLDELSLNGNQL--KDIGTLASL 242
Query: 327 INLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNF 386
NL LDL+ N +SN L L L KL L L N++S P L L L+ L+L+ N
Sbjct: 243 TNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQ 298
Query: 387 LGEKISSRICRMESLEKLNLSYNNLSGLIP 416
L E IS I +++L L L +NN+S + P
Sbjct: 299 L-EDISP-ISNLKNLTYLTLYFNNISDISP 326
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 46/268 (17%)
Query: 117 YNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXXXXRNQLNGSIPHE 176
+ N++ D+ P ++NL+ LE LD +NK+S S NQ++ P
Sbjct: 163 FGNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-- 216
Query: 177 VGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKL 236
+G L L+ L L+ N L +L++ TNL L L NN S P + L L ++KL
Sbjct: 217 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 272
Query: 237 CINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIP 296
NQ++ PL+ +T E+ E+ QL+ + SN
Sbjct: 273 GANQISNISPLA-----------------GLTALTNLELNEN-QLEDISPISN------- 307
Query: 297 TQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYL 356
L N+ YL +L N +S P + SL L+ L N +S+ + SL +L + +L
Sbjct: 308 --LKNLTYL---TLYFNNISDISP--VSSLTKLQRLFFYNNKVSD--VSSLANLTNINWL 358
Query: 357 NLSHNKLSQQIPIELDNLIHLSELDLSH 384
+ HN++S P L NL +++L L+
Sbjct: 359 SAGHNQISDLTP--LANLTRITQLGLND 384
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 13/174 (7%)
Query: 90 NLTSISLNGTLLE--FSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSG 147
NL +SLNG L+ + +S +L LDL NN++ ++ P +S L+KL L N++S
Sbjct: 222 NLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 279
Query: 148 HIPSEXXXXXXXXXXXXXRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNL 207
P NQL P + L L +L L N + P +S+ T L
Sbjct: 280 ISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKL 333
Query: 208 VFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLD 261
L+ YNN S + NL ++ + NQ++ PL+ + R QL L D
Sbjct: 334 QRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTPLA-NLTRITQLGLND 384
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 32/201 (15%)
Query: 503 FDAKHCIGKGGHGSVYIA-RVPSGEIFAVKKFHSPLPDNF------------CSHPR--- 546
FD +G+G +GSVY A +G+I A+K+ P+ + C P
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV--PVESDLQEIIKEISIMQQCDSPHVVK 88
Query: 547 ---------QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF 597
+IV EY +GS+ I+ K L + +++ L YLH F
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIR--LRNKTLTEDEIATILQSTLKGLEYLH---F 143
Query: 598 PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVT 657
+H DI + N+LL+ A ++DF +A L + + + GT +APE+ +
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 658 EKCDVYSFGVLALEVIKGKHP 678
D++S G+ A+E+ +GK P
Sbjct: 204 CVADIWSLGITAIEMAEGKPP 224
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Query: 539 DNFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 598
+ + R + IV EY+E+GSLD L + Q + +++GV + YL + +
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHDG--QFTIMQLVGMLRGVGAGMRYLSDLGY- 172
Query: 599 PIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-----APELAYT 653
VH D++++NVL+D VSDF +++ L D + T G + APE
Sbjct: 173 --VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD--AAXTTTGGKIPIRWTAPEAIAF 228
Query: 654 MKVTEKCDVYSFGVLALEVIK-GKHP 678
+ DV+SFGV+ EV+ G+ P
Sbjct: 229 RTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Query: 539 DNFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 598
+ + R + IV EY+E+GSLD L + Q + +++GV + YL + +
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHDG--QFTIMQLVGMLRGVGAGMRYLSDLGY- 172
Query: 599 PIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-----APELAYT 653
VH D++++NVL+D VSDF +++ L D + T G + APE
Sbjct: 173 --VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD--AAYTTTGGKIPIRWTAPEAIAF 228
Query: 654 MKVTEKCDVYSFGVLALEVIK-GKHP 678
+ DV+SFGV+ EV+ G+ P
Sbjct: 229 RTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 32/195 (16%)
Query: 509 IGKGGHGSVYIARVP-SGEIFAVKKF----------------------HSPLPDNFCSH- 544
IG+G G V IA +G+ AVKK H + D + S+
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 545 -PRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHW 603
+ ++V E+LE G+L I+ + +E T L+V++ AL YLHN ++H
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLR----ALSYLHNQG---VIHR 165
Query: 604 DISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVY 663
DI S ++LL +SDF ++ + L GT +APE+ + + D++
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIW 225
Query: 664 SFGVLALEVIKGKHP 678
S G++ +E+I G+ P
Sbjct: 226 SLGIMVIEMIDGEPP 240
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 7/130 (5%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+++ E+L+ G+L I+ S L Q V + V AL YLH ++H DI S
Sbjct: 118 WVLMEFLQGGALTDIV----SQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSD 170
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
++LL L +SDF ++ D L GT +APE+ + D++S G++
Sbjct: 171 SILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIM 230
Query: 669 ALEVIKGKHP 678
+E++ G+ P
Sbjct: 231 VIEMVDGEPP 240
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 549 FIVYEYLESGSLDKIL-NNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
IV EY+E+GSLD L +DA + Q + +++G+A + YL + + VH D+++
Sbjct: 122 MIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAA 175
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYS 664
+N+L++ VSDF +A+ L D G + +PE K T DV+S
Sbjct: 176 RNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS 235
Query: 665 FGVLALEVIK-GKHP 678
+G++ EV+ G+ P
Sbjct: 236 YGIVLWEVMSYGERP 250
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 549 FIVYEYLESGSLDKIL-NNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
IV EY+E+GSLD L +DA + Q + +++G+A + YL + F VH D+++
Sbjct: 122 MIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGMKYLSDMGF---VHRDLAA 175
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYS 664
+N+L++ VSDF +++ L D G + +PE K T DV+S
Sbjct: 176 RNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS 235
Query: 665 FGVLALEVIK-GKHP 678
+G++ EV+ G+ P
Sbjct: 236 YGIVLWEVMSYGERP 250
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 32/195 (16%)
Query: 509 IGKGGHGSVYIARV-PSGEIFAVKKF----------------------HSPLPDNFCSH- 544
IG+G G V IA V SG++ AVKK H + + + S+
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 545 -PRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHW 603
+ ++V E+LE G+L I+ + +E Q V V AL LH ++H
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG---VIHR 140
Query: 604 DISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVY 663
DI S ++LL +SDF ++ + L GT +APEL + + D++
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 200
Query: 664 SFGVLALEVIKGKHP 678
S G++ +E++ G+ P
Sbjct: 201 SLGIMVIEMVDGEPP 215
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 32/195 (16%)
Query: 509 IGKGGHGSVYIARV-PSGEIFAVKKF----------------------HSPLPDNFCSH- 544
IG+G G V IA V SG++ AVKK H + + + S+
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 545 -PRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHW 603
+ ++V E+LE G+L I+ + +E Q V V AL LH ++H
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG---VIHR 149
Query: 604 DISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVY 663
DI S ++LL +SDF ++ + L GT +APEL + + D++
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 209
Query: 664 SFGVLALEVIKGKHP 678
S G++ +E++ G+ P
Sbjct: 210 SLGIMVIEMVDGEPP 224
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 11/145 (7%)
Query: 539 DNFCSHPRQSFIVYEYLESGSLDKILN-NDASAKELGWTQRLNVIKGVADALFYLHNNCF 597
+ + + IV EY+E+GSLD L ND + Q + +++G++ + YL + +
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDG---QFTVIQLVGMLRGISAGMKYLSDMGY 145
Query: 598 PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTM 654
VH D++++N+L++ VSDF +++ L D G + APE
Sbjct: 146 ---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 655 KVTEKCDVYSFGVLALEVIK-GKHP 678
K T DV+S+G++ EV+ G+ P
Sbjct: 203 KFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 32/195 (16%)
Query: 509 IGKGGHGSVYIARV-PSGEIFAVKKF----------------------HSPLPDNFCSH- 544
IG+G G V IA V SG++ AVKK H + + + S+
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 545 -PRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHW 603
+ ++V E+LE G+L I+ + +E Q V V AL LH ++H
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG---VIHR 144
Query: 604 DISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVY 663
DI S ++LL +SDF ++ + L GT +APEL + + D++
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 204
Query: 664 SFGVLALEVIKGKHP 678
S G++ +E++ G+ P
Sbjct: 205 SLGIMVIEMVDGEPP 219
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 32/195 (16%)
Query: 509 IGKGGHGSVYIARV-PSGEIFAVKKF----------------------HSPLPDNFCSH- 544
IG+G G V IA V SG++ AVKK H + + + S+
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 545 -PRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHW 603
+ ++V E+LE G+L I+ + +E Q V V AL LH ++H
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG---VIHR 151
Query: 604 DISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVY 663
DI S ++LL +SDF ++ + L GT +APEL + + D++
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 211
Query: 664 SFGVLALEVIKGKHP 678
S G++ +E++ G+ P
Sbjct: 212 SLGIMVIEMVDGEPP 226
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 20/142 (14%)
Query: 546 RQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605
R +FI EY++ G+L I+ + S + W+QR++ K +A + YLH+ I+H D+
Sbjct: 81 RLNFIT-EYIKGGTLRGIIKSMDS--QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDL 134
Query: 606 SSKNVLLDLGYEAHVSDFRIAKFL-----------NLDSSNWSKLAGTHGN---VAPELA 651
+S N L+ V+DF +A+ + +L + K GN +APE+
Sbjct: 135 NSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMI 194
Query: 652 YTMKVTEKCDVYSFGVLALEVI 673
EK DV+SFG++ E+I
Sbjct: 195 NGRSYDEKVDVFSFGIVLCEII 216
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 22/212 (10%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L D + L +++ VA + Y+ + +H D+ S
Sbjct: 79 YIVTEYMNKGSLLDFLK-DGEGRALKLPNLVDMAAQVAAGMAYIERMNY---IHRDLRSA 134
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTEKCDVYSFG 666
N+L+ G ++DF +A+ + D+ ++ APE A + T K DV+SFG
Sbjct: 135 NILVGNGLICKIADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 193
Query: 667 VLALE-VIKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLDQ 725
+L E V KG+ P R+P P Q+ +S+ ++ C +
Sbjct: 194 ILLTELVTKGRVP----YPGMNNREVLEQVERGYRMPCP----QDCPISLHELMIHCWKK 245
Query: 726 NPVSRPTMKRFE------VQSKQFHYNPDHNV 751
+P RPT + + + + Y P N+
Sbjct: 246 DPEERPTFEYLQSFLEDYFTATEPQYQPGENL 277
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 39/217 (17%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVKKF-------HSPLPDNFCSHPRQSFI 550
A N+ + + IGKGG G V+ R V + A+K + + + F R+ FI
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 551 ----------------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
V E++ G L L + A + W+ +L ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIALG 134
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN--- 645
+ Y+ N PPIVH D+ S N+ L E ++A F +L + ++G GN
Sbjct: 135 IEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADF-SLSQQSVHSVSGLLGNFQW 192
Query: 646 VAPEL--AYTMKVTEKCDVYSFGVLALEVIKGKHPRD 680
+APE A TEK D YSF ++ ++ G+ P D
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 32/195 (16%)
Query: 509 IGKGGHGSVYIARV-PSGEIFAVKKF----------------------HSPLPDNFCSH- 544
IG+G G V IA V SG++ AVKK H + + + S+
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 545 -PRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHW 603
+ ++V E+LE G+L I+ + +E Q V V AL LH ++H
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG---VIHR 194
Query: 604 DISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVY 663
DI S ++LL +SDF ++ + L GT +APEL + + D++
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 254
Query: 664 SFGVLALEVIKGKHP 678
S G++ +E++ G+ P
Sbjct: 255 SLGIMVIEMVDGEPP 269
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 39/217 (17%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVKKF-------HSPLPDNFCSHPRQSFI 550
A N+ + + IGKGG G V+ R V + A+K + + + F R+ FI
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 551 ----------------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
V E++ G L L + A + W+ +L ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIALG 134
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN--- 645
+ Y+ N PPIVH D+ S N+ L E ++A F L + ++G GN
Sbjct: 135 IEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADF-GLSQQSVHSVSGLLGNFQW 192
Query: 646 VAPEL--AYTMKVTEKCDVYSFGVLALEVIKGKHPRD 680
+APE A TEK D YSF ++ ++ G+ P D
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 35/213 (16%)
Query: 495 EIIRATNDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKF-------------------- 533
+I DF+ +GKG G V++A + + FA+K
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 534 ------HSPLPDNFCSHPRQS--FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGV 585
H L FC+ + F V EYL G L + + S + ++ +
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEI 128
Query: 586 ADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN 645
L +LH+ IV+ D+ N+LLD ++DF + K L + ++ GT
Sbjct: 129 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDY 185
Query: 646 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+APE+ K D +SFGVL E++ G+ P
Sbjct: 186 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+V E E G L+K L + K+ + ++ V+ + YL + F VH D++++
Sbjct: 445 MLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESNF---VHRDLAAR 498
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMKVTEKCDVY 663
NVLL + A +SDF ++K L D + + A THG APE K + K DV+
Sbjct: 499 NVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVW 556
Query: 664 SFGVLALEVIK-GKHP 678
SFGVL E G+ P
Sbjct: 557 SFGVLMWEAFSYGQKP 572
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+V E E G L+K L + K+ + ++ V+ + YL + F VH D++++
Sbjct: 446 MLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESNF---VHRDLAAR 499
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMKVTEKCDVY 663
NVLL + A +SDF ++K L D + + A THG APE K + K DV+
Sbjct: 500 NVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVW 557
Query: 664 SFGVLALEVIK-GKHP 678
SFGVL E G+ P
Sbjct: 558 SFGVLMWEAFSYGQKP 573
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 11/135 (8%)
Query: 549 FIVYEYLESGSLDKIL-NNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
I+ EY+E+GSLD L ND + Q + +++G+ + YL + + VH D+++
Sbjct: 85 MIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLSDMSY---VHRDLAA 138
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYS 664
+N+L++ VSDF +++ L D G + APE K T DV+S
Sbjct: 139 RNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWS 198
Query: 665 FGVLALEVIK-GKHP 678
+G++ EV+ G+ P
Sbjct: 199 YGIVMWEVMSYGERP 213
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 87/205 (42%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS ++L GT + PE+
Sbjct: 126 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEMIEG 180
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 11/135 (8%)
Query: 549 FIVYEYLESGSLDKIL-NNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
I+ EY+E+GSLD L ND + Q + +++G+ + YL + + VH D+++
Sbjct: 91 MIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLSDMSY---VHRDLAA 144
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYS 664
+N+L++ VSDF +++ L D G + APE K T DV+S
Sbjct: 145 RNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWS 204
Query: 665 FGVLALEVIK-GKHP 678
+G++ EV+ G+ P
Sbjct: 205 YGIVMWEVMSYGERP 219
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 21/198 (10%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRL-NVIKGVADALFYLHNNCFPPI 600
C+ R FI+ EY+ +G L LN + TQ+L + K V +A+ YL + F
Sbjct: 88 CTKQRPIFIITEYMANGCL---LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 141
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVA---PELAYTMKVT 657
+H D++++N L++ VSDF +++++ LD S + G+ V PE+ K +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEETSSV-GSKFPVRWSPPEVLMYSKFS 199
Query: 658 EKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIM 716
K D+++FGVL E+ GK P + RL P L K +IM
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL----RLYRPHL-ASEKVYTIM 254
Query: 717 QVAFSCLDQNPVSRPTMK 734
+SC + RPT K
Sbjct: 255 ---YSCWHEKADERPTFK 269
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 525 GEIFAVKKFHSP---LPDNFCSHPRQSFIVYEYLESGSLDKIL-NNDASAKELGWTQRLN 580
GE + +F P + + + IV EY+E+GSLD L +DA + Q +
Sbjct: 83 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVG 139
Query: 581 VIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLA 640
+++G+A + YL + + VH D++++N+L++ VSDF +++ L D
Sbjct: 140 MLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
Query: 641 GTHGNV---APELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 678
G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 197 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 549 FIVYEYLESGSLDKIL-NNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
IV EY+E+GSLD L +DA + Q + +++G+A + YL + + VH D+++
Sbjct: 122 MIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAA 175
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYS 664
+N+L++ VSDF +++ L D G + +PE K T DV+S
Sbjct: 176 RNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS 235
Query: 665 FGVLALEVIK-GKHP 678
+G++ EV+ G+ P
Sbjct: 236 YGIVLWEVMSYGERP 250
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 100/262 (38%), Gaps = 48/262 (18%)
Query: 506 KHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-------------------------- 539
+ IG GG G VY A E+ H P D
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 540 -NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 598
C +V E+ G L+++L S K + +N +A + YLH+
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVL----SGKRIPPDILVNWAVQIARGMNYLHDEAIV 127
Query: 599 PIVHWDISSKNVLL-------DLGYEA-HVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
PI+H D+ S N+L+ DL + ++DF +A+ + + AG + +APE+
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK--MSAAGAYAWMAPEV 185
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQN 710
++ DV+S+GVL E++ G+ P LP PS
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVP---FRGIDGLAVAYGVAMNKLALPIPS-TCPE 241
Query: 711 KFMSIMQVAFSCLDQNPVSRPT 732
F +M+ C + +P SRP+
Sbjct: 242 PFAKLME---DCWNPDPHSRPS 260
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 15/188 (7%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EYL GS +L L TQ +++ + L YLH+ +H DI +
Sbjct: 101 WIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSE---KKIHRDIKAA 153
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
NVLL E ++DF +A L + GT +APE+ K D++S G+
Sbjct: 154 NVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGIT 213
Query: 669 ALEVIKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPV 728
A+E+ +G+ P P+L+ N + + +CL++ P
Sbjct: 214 AIELARGEPPHSELHPMKVLFLIPKNNP-------PTLE-GNYSKPLKEFVEACLNKEPS 265
Query: 729 SRPTMKRF 736
RPT K
Sbjct: 266 FRPTAKEL 273
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 549 FIVYEYLESGSLDKIL-NNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
IV EY+E+GSLD L +DA + Q + +++G+A + YL + + VH D+++
Sbjct: 122 MIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAA 175
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYS 664
+N+L++ VSDF +++ L D G + +PE K T DV+S
Sbjct: 176 RNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS 235
Query: 665 FGVLALEVIK-GKHP 678
+G++ EV+ G+ P
Sbjct: 236 YGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 549 FIVYEYLESGSLDKIL-NNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
IV EY+E+GSLD L +DA + Q + +++G+A + YL + + VH D+++
Sbjct: 122 MIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAA 175
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYS 664
+N+L++ VSDF +++ L D G + +PE K T DV+S
Sbjct: 176 RNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS 235
Query: 665 FGVLALEVIK-GKHP 678
+G++ EV+ G+ P
Sbjct: 236 YGIVLWEVMSYGERP 250
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+V E E G L+K L + K+ + ++ V+ + YL + F VH D++++
Sbjct: 87 MLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESNF---VHRDLAAR 140
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMKVTEKCDVY 663
NVLL + A +SDF ++K L D + + A THG APE K + K DV+
Sbjct: 141 NVLLVTQHYAKISDFGLSKALRADENXYK--AQTHGKWPVKWYAPECINYYKFSSKSDVW 198
Query: 664 SFGVLALEVIK-GKHP 678
SFGVL E G+ P
Sbjct: 199 SFGVLMWEAFSYGQKP 214
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 549 FIVYEYLESGSLDKIL-NNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
IV EY+E+GSLD L +DA + Q + +++G+A + YL + + VH D+++
Sbjct: 122 MIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAA 175
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYS 664
+N+L++ VSDF +++ L D G + +PE K T DV+S
Sbjct: 176 RNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS 235
Query: 665 FGVLALEVIK-GKHP 678
+G++ EV+ G+ P
Sbjct: 236 YGIVLWEVMSYGERP 250
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 22/156 (14%)
Query: 540 NFCSHPRQSFIVYEYLESGSLDKILNN------------DASAKELGWTQRLNVIKGVAD 587
C+ R +V+EY+ G L++ L + D + LG Q L V VA
Sbjct: 110 GVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAA 169
Query: 588 ALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH---- 643
+ YL F VH D++++N L+ G + DF +++ ++ S+++ ++ G
Sbjct: 170 GMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRTMLPI 224
Query: 644 GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 678
+ PE K T + DV+SFGV+ E+ GK P
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 525 GEIFAVKKFHSP---LPDNFCSHPRQSFIVYEYLESGSLDKIL-NNDASAKELGWTQRLN 580
GE + +F P + + + IV EY+E+GSLD L +DA + Q +
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVG 122
Query: 581 VIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLA 640
+++G+A + YL + + VH D++++N+L++ VSDF +++ L D
Sbjct: 123 MLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 641 GTHGNV---APELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 678
G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
IV EY+E+GSLD L + + Q + +++G+A + YL + + VH D++++
Sbjct: 120 MIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAAR 174
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L++ VSDF +++ L D G + +PE K T DV+S+
Sbjct: 175 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 234
Query: 666 GVLALEVIK-GKHP 678
G++ EV+ G+ P
Sbjct: 235 GIVLWEVMSYGERP 248
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 36/208 (17%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPDNFCSH------------ 544
A DF+ +GKG G+VY+AR + I A+K F + L H
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 545 --------------PRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALF 590
+ +++ EY G + K L + E + I +A+AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE---QRTATYITELANALS 127
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
Y H+ ++H DI +N+LL E ++DF + ++ SS + L GT + PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 182
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 87/205 (42%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLP--------------DNFC 542
A DF+ +GKG G+VY+AR + + I A+K F + L +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 543 SHP---------RQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
HP S VY LE L + + + I +A+AL Y H
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS + L GT + PE+
Sbjct: 126 SK---KVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEG 180
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
IV EY+E+GSLD L + + Q + +++G+A + YL + + VH D++++
Sbjct: 122 MIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAAR 176
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L++ VSDF + + L D G + +PE K T DV+S+
Sbjct: 177 NILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 666 GVLALEVIK-GKHP 678
G++ EV+ G+ P
Sbjct: 237 GIVLWEVMSYGERP 250
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS + L GT + PE+
Sbjct: 125 SKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 179
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 180 RMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRL-NVIKGVADALFYLHNNCFPPI 600
C+ R FI+ EY+ +G L LN + TQ+L + K V +A+ YL + F
Sbjct: 73 CTKQRPIFIITEYMANGCL---LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 126
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVA---PELAYTMKVT 657
+H D++++N L++ VSDF +++++ D S+ G+ V PE+ K +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSR--GSKFPVRWSPPEVLMYSKFS 184
Query: 658 EKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIM 716
K D+++FGVL E+ GK P + RL P L K +IM
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL----RLYRPHL-ASEKVYTIM 239
Query: 717 QVAFSCLDQNPVSRPTMK 734
+SC + RPT K
Sbjct: 240 ---YSCWHEKADERPTFK 254
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS + L GT + PE+
Sbjct: 126 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 180
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS + L GT + PE+
Sbjct: 130 SKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS + L GT + PE+
Sbjct: 129 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRL-NVIKGVADALFYLHNNCFPPI 600
C+ R FI+ EY+ +G L LN + TQ+L + K V +A+ YL + F
Sbjct: 88 CTKQRPIFIITEYMANGCL---LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 141
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVA---PELAYTMKVT 657
+H D++++N L++ VSDF +++++ D ++ G+ V PE+ K +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 658 EKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIM 716
K D+++FGVL E+ GK P + RL P L K +IM
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL----RLYRPHL-ASEKVYTIM 254
Query: 717 QVAFSCLDQNPVSRPTMK 734
+SC + RPT K
Sbjct: 255 ---YSCWHEKADERPTFK 269
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS + L GT + PE+
Sbjct: 126 SKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEMIEG 180
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 32/195 (16%)
Query: 509 IGKGGHGSVYIARV-PSGEIFAVKKF----------------------HSPLPDNFCSH- 544
IG+G G V IA V SG++ AVKK H + + + S+
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 545 -PRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHW 603
+ ++V E+LE G+L I+ + +E Q V V AL LH ++H
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG---VIHR 271
Query: 604 DISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVY 663
DI S ++LL +SDF ++ + L GT +APEL + + D++
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 331
Query: 664 SFGVLALEVIKGKHP 678
S G++ +E++ G+ P
Sbjct: 332 SLGIMVIEMVDGEPP 346
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS + L GT + PE+
Sbjct: 126 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG 180
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 37/216 (17%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVKKF-------HSPLPDNFCSHPRQSFI 550
A N+ + + IGKGG G V+ R V + A+K + + + F R+ FI
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 551 ----------------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
V E++ G L L + A + W+ +L ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIALG 134
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSS--NWSKLAGTHGNV 646
+ Y+ N PPIVH D+ S N+ L E ++A F S + S L G +
Sbjct: 135 IEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWM 193
Query: 647 APEL--AYTMKVTEKCDVYSFGVLALEVIKGKHPRD 680
APE A TEK D YSF ++ ++ G+ P D
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 89/213 (41%), Gaps = 43/213 (20%)
Query: 503 FDAKHCIGKGGHGSVYIAR---VPSGEIFAVKKFHSPL-PDN---FC---------SHP- 545
++ K +G GG G Y+ R +GE A+K+ L P N +C +HP
Sbjct: 16 WEMKERLGTGGFG--YVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPN 73
Query: 546 ----RQ-------------SFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
R+ + EY E G L K LN + L ++ ++ A
Sbjct: 74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEA---HVSDFRIAKFLNLDSSNWSKLAGTHGN 645
L YLH N I+H D+ +N++L G + + D AK L+ ++ GT
Sbjct: 134 LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQY 189
Query: 646 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+APEL K T D +SFG LA E I G P
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS + L GT + PE+
Sbjct: 129 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRL-NVIKGVADALFYLHNNCFPPI 600
C+ R FI+ EY+ +G L LN + TQ+L + K V +A+ YL + F
Sbjct: 79 CTKQRPIFIITEYMANGCL---LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 132
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVA---PELAYTMKVT 657
+H D++++N L++ VSDF +++++ D ++ G+ V PE+ K +
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 658 EKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIM 716
K D+++FGVL E+ GK P + RL P L K +IM
Sbjct: 191 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL----RLYRPHL-ASEKVYTIM 245
Query: 717 QVAFSCLDQNPVSRPTMK 734
+SC + RPT K
Sbjct: 246 ---YSCWHEKADERPTFK 260
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 22/156 (14%)
Query: 540 NFCSHPRQSFIVYEYLESGSLDKILNN------------DASAKELGWTQRLNVIKGVAD 587
C+ R +V+EY+ G L++ L + D + LG Q L V VA
Sbjct: 87 GVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAA 146
Query: 588 ALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH---- 643
+ YL F VH D++++N L+ G + DF +++ ++ S+++ ++ G
Sbjct: 147 GMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRTMLPI 201
Query: 644 GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 678
+ PE K T + DV+SFGV+ E+ GK P
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 22/156 (14%)
Query: 540 NFCSHPRQSFIVYEYLESGSLDKILNN------------DASAKELGWTQRLNVIKGVAD 587
C+ R +V+EY+ G L++ L + D + LG Q L V VA
Sbjct: 81 GVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAA 140
Query: 588 ALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH---- 643
+ YL F VH D++++N L+ G + DF +++ ++ S+++ ++ G
Sbjct: 141 GMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRTMLPI 195
Query: 644 GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 678
+ PE K T + DV+SFGV+ E+ GK P
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRL-NVIKGVADALFYLHNNCFPPI 600
C+ R FI+ EY+ +G L LN + TQ+L + K V +A+ YL + F
Sbjct: 72 CTKQRPIFIITEYMANGCL---LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 125
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVA---PELAYTMKVT 657
+H D++++N L++ VSDF +++++ D ++ G+ V PE+ K +
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFS 183
Query: 658 EKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIM 716
K D+++FGVL E+ GK P + RL P L K +IM
Sbjct: 184 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL----RLYRPHL-ASEKVYTIM 238
Query: 717 QVAFSCLDQNPVSRPTMK 734
+SC + RPT K
Sbjct: 239 ---YSCWHEKADERPTFK 253
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 15/188 (7%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EYL GS +L L TQ +++ + L YLH+ +H DI +
Sbjct: 96 WIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSE---KKIHRDIKAA 148
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
NVLL E ++DF +A L + GT +APE+ K D++S G+
Sbjct: 149 NVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGIT 208
Query: 669 ALEVIKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPV 728
A+E+ +G+ P P+L+ N + + +CL++ P
Sbjct: 209 AIELARGEPPHSELHPMKVLFLIPKNNP-------PTLE-GNYSKPLKEFVEACLNKEPS 260
Query: 729 SRPTMKRF 736
RPT K
Sbjct: 261 FRPTAKEL 268
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+V E E G L+K L + K+ + ++ V+ + YL + F VH D++++
Sbjct: 101 MLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESNF---VHRDLAAR 154
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMKVTEKCDVY 663
NVLL + A +SDF ++K L D + + A THG APE K + K DV+
Sbjct: 155 NVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVW 212
Query: 664 SFGVLALEVIK-GKHP 678
SFGVL E G+ P
Sbjct: 213 SFGVLMWEAFSYGQKP 228
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 89/213 (41%), Gaps = 43/213 (20%)
Query: 503 FDAKHCIGKGGHGSVYIAR---VPSGEIFAVKKFHSPL-PDN---FC---------SHP- 545
++ K +G GG G Y+ R +GE A+K+ L P N +C +HP
Sbjct: 17 WEMKERLGTGGFG--YVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPN 74
Query: 546 ----RQ-------------SFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
R+ + EY E G L K LN + L ++ ++ A
Sbjct: 75 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEA---HVSDFRIAKFLNLDSSNWSKLAGTHGN 645
L YLH N I+H D+ +N++L G + + D AK L+ ++ GT
Sbjct: 135 LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQY 190
Query: 646 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+APEL K T D +SFG LA E I G P
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRL-NVIKGVADALFYLHNNCFPPI 600
C+ R FI+ EY+ +G L LN + TQ+L + K V +A+ YL + F
Sbjct: 73 CTKQRPIFIITEYMANGCL---LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 126
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVA---PELAYTMKVT 657
+H D++++N L++ VSDF +++++ D ++ G+ V PE+ K +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 658 EKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIM 716
K D+++FGVL E+ GK P + RL P L K +IM
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL----RLYRPHL-ASEKVYTIM 239
Query: 717 QVAFSCLDQNPVSRPTMK 734
+SC + RPT K
Sbjct: 240 ---YSCWHEKADERPTFK 254
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 15/188 (7%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EYL GS +L L TQ +++ + L YLH+ +H DI +
Sbjct: 81 WIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSE---KKIHRDIKAA 133
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
NVLL E ++DF +A L + GT +APE+ K D++S G+
Sbjct: 134 NVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGIT 193
Query: 669 ALEVIKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPV 728
A+E+ +G+ P P+L+ N + + +CL++ P
Sbjct: 194 AIELARGEPPHSELHPMKVLFLIPKNNP-------PTLE-GNYSKPLKEFVEACLNKEPS 245
Query: 729 SRPTMKRF 736
RPT K
Sbjct: 246 FRPTAKEL 253
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 15/188 (7%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EYL GS +L L TQ +++ + L YLH+ +H DI +
Sbjct: 81 WIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSE---KKIHRDIKAA 133
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
NVLL E ++DF +A L + GT +APE+ K D++S G+
Sbjct: 134 NVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGIT 193
Query: 669 ALEVIKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPV 728
A+E+ +G+ P P+L+ N + + +CL++ P
Sbjct: 194 AIELARGEPPHSELHPMKVLFLIPKNNP-------PTLE-GNYSKPLKEFVEACLNKEPS 245
Query: 729 SRPTMKRF 736
RPT K
Sbjct: 246 FRPTAKEL 253
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRL-NVIKGVADALFYLHNNCFPPI 600
C+ R FI+ EY+ +G L LN + TQ+L + K V +A+ YL + F
Sbjct: 68 CTKQRPIFIITEYMANGCL---LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 121
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVA---PELAYTMKVT 657
+H D++++N L++ VSDF +++++ D ++ G+ V PE+ K +
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFS 179
Query: 658 EKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIM 716
K D+++FGVL E+ GK P + RL P L K +IM
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL----RLYRPHL-ASEKVYTIM 234
Query: 717 QVAFSCLDQNPVSRPTMK 734
+SC + RPT K
Sbjct: 235 ---YSCWHEKADERPTFK 249
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS + L GT + PE+
Sbjct: 131 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+V E E G L+K L + K+ + ++ V+ + YL + F VH D++++
Sbjct: 93 MLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESNF---VHRDLAAR 146
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMKVTEKCDVY 663
NVLL + A +SDF ++K L D + + A THG APE K + K DV+
Sbjct: 147 NVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVW 204
Query: 664 SFGVLALEVIK-GKHP 678
SFGVL E G+ P
Sbjct: 205 SFGVLMWEAFSYGQKP 220
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS + L GT + PE+
Sbjct: 127 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG 181
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS + L GT + PE+
Sbjct: 152 SKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 206
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS + L GT + PE+
Sbjct: 126 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG 180
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+V E E G L+K L + K+ + ++ V+ + YL + F VH D++++
Sbjct: 103 MLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESNF---VHRDLAAR 156
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMKVTEKCDVY 663
NVLL + A +SDF ++K L D + + A THG APE K + K DV+
Sbjct: 157 NVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVW 214
Query: 664 SFGVLALEVIK-GKHP 678
SFGVL E G+ P
Sbjct: 215 SFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+V E E G L+K L + K+ + ++ V+ + YL + F VH D++++
Sbjct: 103 MLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESNF---VHRDLAAR 156
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMKVTEKCDVY 663
NVLL + A +SDF ++K L D + + A THG APE K + K DV+
Sbjct: 157 NVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVW 214
Query: 664 SFGVLALEVIK-GKHP 678
SFGVL E G+ P
Sbjct: 215 SFGVLMWEAFSYGQKP 230
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+V E E G L+K L + K+ + ++ V+ + YL + F VH D++++
Sbjct: 83 MLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESNF---VHRDLAAR 136
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMKVTEKCDVY 663
NVLL + A +SDF ++K L D + + A THG APE K + K DV+
Sbjct: 137 NVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVW 194
Query: 664 SFGVLALEVIK-GKHP 678
SFGVL E G+ P
Sbjct: 195 SFGVLMWEAFSYGQKP 210
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS + L GT + PE+
Sbjct: 129 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEG 183
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS + L GT + PE+
Sbjct: 123 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 177
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 178 RMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+V E E G L+K L + K+ + ++ V+ + YL + F VH D++++
Sbjct: 87 MLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESNF---VHRDLAAR 140
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMKVTEKCDVY 663
NVLL + A +SDF ++K L D + + A THG APE K + K DV+
Sbjct: 141 NVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVW 198
Query: 664 SFGVLALEVIK-GKHP 678
SFGVL E G+ P
Sbjct: 199 SFGVLMWEAFSYGQKP 214
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+V E E G L+K L + K+ + ++ V+ + YL + F VH D++++
Sbjct: 81 MLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESNF---VHRDLAAR 134
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMKVTEKCDVY 663
NVLL + A +SDF ++K L D + + A THG APE K + K DV+
Sbjct: 135 NVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVW 192
Query: 664 SFGVLALEVIK-GKHP 678
SFGVL E G+ P
Sbjct: 193 SFGVLMWEAFSYGQKP 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS + L GT + PE+
Sbjct: 126 SKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEG 180
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 73/163 (44%), Gaps = 4/163 (2%)
Query: 279 PQLQYLDLSSNYIVG-EIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSAN 337
P ++YL L N + +L N+ YL L+GN+L G L NL+ L L N
Sbjct: 63 PNVRYLALGGNKLHDISALKELTNLTYL---ILTGNQLQSLPNGVFDKLTNLKELVLVEN 119
Query: 338 HLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICR 397
L + L L YLNL+HN+L D L +L+ELDLS+N L +
Sbjct: 120 QLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDK 179
Query: 398 MESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIP 440
+ L+ L L N L + F+ L L +I + N + P
Sbjct: 180 LTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 6/153 (3%)
Query: 299 LGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNL 358
L N+ YL +L GNKL L L NL YL L+ N L + L L L L
Sbjct: 62 LPNVRYL---ALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116
Query: 359 SHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRC 418
N+L D L +L+ L+L+HN L ++ +L +L+LSYN L L
Sbjct: 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGV 176
Query: 419 FEELHGLLHIDISYNKLEGHIPNSTTFRDAPLE 451
F++L L + + N+L+ +P+ R L+
Sbjct: 177 FDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQ 208
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 65/168 (38%), Gaps = 7/168 (4%)
Query: 275 IGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDL 334
+ E L YL L+ N + + L + L N+L G L NL YL+L
Sbjct: 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140
Query: 335 SANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSR 394
+ N L + L L L+LS+N+L D L L +L L N L
Sbjct: 141 AHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGV 200
Query: 395 ICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPNS 442
R+ SL+ + L N P G+ ++ NK G + NS
Sbjct: 201 FDRLTSLQYIWLHDNPWDCTCP-------GIRYLSEWINKHSGVVRNS 241
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY++ +L I++ + + + + VI AL + H N I+H D+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSN----WSKLAGTHGNVAPELAYTMKVTEKCDVYS 664
N+L+ V DF IA+ + DS N + + GT ++PE A V + DVYS
Sbjct: 146 NILISATNAVKVVDFGIARAI-ADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 665 FGVLALEVIKGKHP 678
G + EV+ G+ P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS + L GT + PE+
Sbjct: 143 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 197
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 198 RMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS + L GT + PE+
Sbjct: 131 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG 185
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + + SS + L+GT + PE+
Sbjct: 127 SKR---VIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEMIEG 181
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 85/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS L GT + PE+
Sbjct: 129 SKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEG 183
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 85/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS L GT + PE+
Sbjct: 129 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG 183
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 11/135 (8%)
Query: 549 FIVYEYLESGSLDKIL-NNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
I+ EY+E+GSLD L ND + Q + +++G+ + YL + VH D+++
Sbjct: 106 MIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLSDMS---AVHRDLAA 159
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYS 664
+N+L++ VSDF +++ L D G + APE K T DV+S
Sbjct: 160 RNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWS 219
Query: 665 FGVLALEVIK-GKHP 678
+G++ EV+ G+ P
Sbjct: 220 YGIVMWEVMSYGERP 234
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 87/208 (41%), Gaps = 36/208 (17%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPDNFCSH------------ 544
A DF+ +GKG G+VY+AR + I A+K F + L H
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 545 --------------PRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALF 590
+ +++ EY G + K L + E + I +A+AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE---QRTATYITELANALS 127
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
Y H+ ++H DI +N+LL E ++DF + ++ SS L GT + PE+
Sbjct: 128 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEM 182
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 85/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS L GT + PE+
Sbjct: 126 SKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG 180
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L + + K L Q +++ +A + Y+ + VH D+ +
Sbjct: 85 YIVTEYMNKGSLLDFLKGE-TGKYLRLPQLVDMSAQIASGMAYVERMNY---VHRDLRAA 140
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ V+DF +A+ + + + W+ G + APE A + T K DV+SF
Sbjct: 141 NILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 198
Query: 666 GVLALEV-IKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLD 724
G+L E+ KG+ P R+P P + S+ + C
Sbjct: 199 GILLTELTTKGRVP----YPGMVNREVLDQVERGYRMPCPPECPE----SLHDLMCQCWR 250
Query: 725 QNPVSRPTMKRFEV------QSKQFHYNPDHNV 751
+ P RPT + + S + Y P N+
Sbjct: 251 KEPEERPTFEYLQAFLEDYFTSTEPQYQPGENL 283
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 85/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS L GT + PE+
Sbjct: 127 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEG 181
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY++ +L I++ + + + + VI AL + H N I+H D+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSN----WSKLAGTHGNVAPELAYTMKVTEKCDVYS 664
N+++ V DF IA+ + DS N + + GT ++PE A V + DVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 665 FGVLALEVIKGKHP 678
G + EV+ G+ P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY++ +L I++ + + + + VI AL + H N I+H D+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSN----WSKLAGTHGNVAPELAYTMKVTEKCDVYS 664
N+++ V DF IA+ + DS N + + GT ++PE A V + DVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 665 FGVLALEVIKGKHP 678
G + EV+ G+ P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 85/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS L GT + PE+
Sbjct: 128 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG 182
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY++ +L I++ + + + + VI AL + H N I+H D+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSN----WSKLAGTHGNVAPELAYTMKVTEKCDVYS 664
N+++ V DF IA+ + DS N + + GT ++PE A V + DVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 665 FGVLALEVIKGKHP 678
G + EV+ G+ P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 85/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS L GT + PE+
Sbjct: 152 SKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEG 206
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY++ +L I++ + + + + VI AL + H N I+H D+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSN----WSKLAGTHGNVAPELAYTMKVTEKCDVYS 664
N+++ V DF IA+ + DS N + + GT ++PE A V + DVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 665 FGVLALEVIKGKHP 678
G + EV+ G+ P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY++ +L I++ + + + + VI AL + H N I+H D+
Sbjct: 109 YIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 162
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSN----WSKLAGTHGNVAPELAYTMKVTEKCDVYS 664
N+++ V DF IA+ + DS N + + GT ++PE A V + DVYS
Sbjct: 163 NIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 221
Query: 665 FGVLALEVIKGKHP 678
G + EV+ G+ P
Sbjct: 222 LGCVLYEVLTGEPP 235
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
IV E++E+G+LD L + Q + +++G+A + YL + + VH D++++
Sbjct: 120 MIVIEFMENGALDAFLRKHDG--QFTVIQLVGMLRGIAAGMRYLADMGY---VHRDLAAR 174
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L++ VSDF +++ + D G V APE K T DV+S+
Sbjct: 175 NILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSY 234
Query: 666 GVLALEVIK-GKHP 678
G++ EV+ G+ P
Sbjct: 235 GIVMWEVMSYGERP 248
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
Query: 295 IPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLY 354
IPT I+YL+ N+++ PG SLINL+ L L +N L + SL +L
Sbjct: 38 IPTN-AQILYLH-----DNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLT 91
Query: 355 YLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGL 414
L+L N+L+ D L+HL EL + N L E + I R+ L L L N L +
Sbjct: 92 VLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTE-LPRGIERLTHLTHLALDQNQLKSI 150
Query: 415 IPRCFEELHGLLH 427
F+ L L H
Sbjct: 151 PHGAFDRLSSLTH 163
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 3/133 (2%)
Query: 269 GNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLIN 328
++P I + Q+ YL N I P ++I L + L N+L G SL
Sbjct: 32 ASVPAGIPTNAQILYL--HDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQ 89
Query: 329 LEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLG 388
L LDL N L+ LV L L + NKL+ ++P ++ L HL+ L L N L
Sbjct: 90 LTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK 148
Query: 389 EKISSRICRMESL 401
R+ SL
Sbjct: 149 SIPHGAFDRLSSL 161
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Query: 195 GSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRC 254
S+P + TN LYL++N + P +L +L ++ L NQL GA+P+ + +
Sbjct: 32 ASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGV-FDSL 87
Query: 255 PQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNK 314
QL++LD+ N +T L+ L + N + E+P + + +L ++L N+
Sbjct: 88 TQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQ 146
Query: 315 LSGRIPGELGSLINLEYLDLSAN 337
L G L +L + L N
Sbjct: 147 LKSIPHGAFDRLSSLTHAYLFGN 169
Score = 32.3 bits (72), Expect = 1.1, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Query: 105 FSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXXX 164
F S +L L L +N+L + +L++L LD TN+L+ +
Sbjct: 60 FDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119
Query: 165 XRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPR-SLSNFTNLVFLYLYNNSF 217
N+L +P + +L L HL LD N L SIP + ++L YL+ N +
Sbjct: 120 CCNKLT-ELPRGIERLTHLTHLALDQNQL-KSIPHGAFDRLSSLTHAYLFGNPW 171
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 85/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E ++DF + ++ SS + L GT + PE
Sbjct: 131 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEXIEG 185
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 186 RXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 84/213 (39%), Gaps = 35/213 (16%)
Query: 495 EIIRATNDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKF-------------------- 533
+I DF +GKG G V++A + + FA+K
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 534 ------HSPLPDNFCSHPRQS--FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGV 585
H L FC+ + F V EYL G L + + S + ++ +
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEI 127
Query: 586 ADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN 645
L +LH+ IV+ D+ N+LLD ++DF + K L + + GT
Sbjct: 128 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDY 184
Query: 646 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+APE+ K D +SFGVL E++ G+ P
Sbjct: 185 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 22/194 (11%)
Query: 550 IVYEYLESGSLDKILNND------ASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHW 603
+V EY E GSL +L+ +A + W L +GVA YLH+ ++H
Sbjct: 77 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC--LQCSQGVA----YLHSMQPKALIHR 130
Query: 604 DISSKNVLLDLGYEA-HVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDV 662
D+ N+LL G + DF A + +N G+ +APE+ +EKCDV
Sbjct: 131 DLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN---NKGSAAWMAPEVFEGSNYSEKCDV 187
Query: 663 YSFGVLALEVIKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSC 722
+S+G++ EVI + P D +R P ++N I + C
Sbjct: 188 FSWGIILWEVITRRKPFD--EIGGPAFRIMWAVHNGTRPPL----IKNLPKPIESLMTRC 241
Query: 723 LDQNPVSRPTMKRF 736
++P RP+M+
Sbjct: 242 WSKDPSQRPSMEEI 255
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E +++F + ++ SS + L GT + PE+
Sbjct: 129 SKR---VIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 22/194 (11%)
Query: 550 IVYEYLESGSLDKILNND------ASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHW 603
+V EY E GSL +L+ +A + W L +GVA YLH+ ++H
Sbjct: 76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC--LQCSQGVA----YLHSMQPKALIHR 129
Query: 604 DISSKNVLLDLGYEA-HVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDV 662
D+ N+LL G + DF A + +N G+ +APE+ +EKCDV
Sbjct: 130 DLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN---NKGSAAWMAPEVFEGSNYSEKCDV 186
Query: 663 YSFGVLALEVIKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSC 722
+S+G++ EVI + P D +R P ++N I + C
Sbjct: 187 FSWGIILWEVITRRKPFD--EIGGPAFRIMWAVHNGTRPPL----IKNLPKPIESLMTRC 240
Query: 723 LDQNPVSRPTMKRF 736
++P RP+M+
Sbjct: 241 WSKDPSQRPSMEEI 254
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 10/133 (7%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
F+V + L G L L + KE T +L + + V AL YL N I+H D+
Sbjct: 91 FMVVDLLLGGDLRYHLQQNVHFKEE--TVKLFICELVM-ALDYLQNQ---RIIHRDMKPD 144
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMK---VTEKCDVYSF 665
N+LLD H++DF IA L ++ + +AGT +APE+ + K + D +S
Sbjct: 145 NILLDEHGHVHITDFNIAAMLPRETQ-ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSL 203
Query: 666 GVLALEVIKGKHP 678
GV A E+++G+ P
Sbjct: 204 GVTAYELLRGRRP 216
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHP 545
A DF+ +GKG G+VY+AR + I A+K F + L SH
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 546 RQSFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
R I VY LE L + + + I +A+AL Y H
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ ++H DI +N+LL E +++F + ++ SS + L GT + PE+
Sbjct: 128 SK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 182
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + GK P
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 23/193 (11%)
Query: 550 IVYEYLESGSLDKILNNDAS--AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
+V+E++E G L L A E L+V +G+A YL C ++H D+++
Sbjct: 99 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC---VIHRDLAA 151
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYS 664
+N L+ VSDF + +F+ D ++ GT V +PE+ + + K DV+S
Sbjct: 152 RNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 209
Query: 665 FGVLALEVI-KGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCL 723
FGVL EV +GK P + RL P L + + Q+ C
Sbjct: 210 FGVLMWEVFSEGKIPYENRSNSEVVEDISTGF----RLYKPRLASTH----VYQIMNHCW 261
Query: 724 DQNPVSRPTMKRF 736
+ P RP R
Sbjct: 262 KERPEDRPAFSRL 274
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 77/188 (40%), Gaps = 15/188 (7%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EYL GS +L A Q ++K + L YLH+ +H DI +
Sbjct: 97 WIIMEYLGGGSALDLLR----AGPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAA 149
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
NVLL + ++DF +A L + GT +APE+ K D++S G+
Sbjct: 150 NVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGIT 209
Query: 669 ALEVIKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPV 728
A+E+ KG+ P P V + S + +CL+++P
Sbjct: 210 AIELAKGEPPNSDMHPMRVLFLIPKNN--------PPTLVGDFTKSFKEFIDACLNKDPS 261
Query: 729 SRPTMKRF 736
RPT K
Sbjct: 262 FRPTAKEL 269
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 23/192 (11%)
Query: 550 IVYEYLESGSLDKILNNDAS--AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
+V+E++E G L L A E L+V +G+A YL C ++H D+++
Sbjct: 79 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC---VIHRDLAA 131
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYS 664
+N L+ VSDF + +F+ D ++ GT V +PE+ + + K DV+S
Sbjct: 132 RNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 665 FGVLALEVI-KGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCL 723
FGVL EV +GK P + RL P L + + Q+ C
Sbjct: 190 FGVLMWEVFSEGKIPYENRSNSEVVEDISTGF----RLYKPRLASTH----VYQIMNHCW 241
Query: 724 DQNPVSRPTMKR 735
+ P RP R
Sbjct: 242 KERPEDRPAFSR 253
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 23/192 (11%)
Query: 550 IVYEYLESGSLDKILNNDAS--AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
+V+E++E G L L A E L+V +G+A YL C ++H D+++
Sbjct: 77 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC---VIHRDLAA 129
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYS 664
+N L+ VSDF + +F+ D ++ GT V +PE+ + + K DV+S
Sbjct: 130 RNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 665 FGVLALEVI-KGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCL 723
FGVL EV +GK P + RL P L + + Q+ C
Sbjct: 188 FGVLMWEVFSEGKIPYENRSNSEVVEDISTGF----RLYKPRLASTH----VYQIMNHCW 239
Query: 724 DQNPVSRPTMKR 735
+ P RP R
Sbjct: 240 KERPEDRPAFSR 251
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 549 FIVYEYLESGSLDKIL-NNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
IV E +E+GSLD L +DA + Q + +++G+A + YL + + VH D+++
Sbjct: 122 MIVTEXMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAA 175
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYS 664
+N+L++ VSDF +++ L D G + +PE K T DV+S
Sbjct: 176 RNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS 235
Query: 665 FGVLALEVIK-GKHP 678
+G++ EV+ G+ P
Sbjct: 236 YGIVLWEVMSYGERP 250
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 525 GEIFAVKKFHSP---LPDNFCSHPRQSFIVYEYLESGSLDKIL-NNDASAKELGWTQRLN 580
GE + +F P + + + IV E +E+GSLD L +DA + Q +
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA---QFTVIQLVG 122
Query: 581 VIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLA 640
+++G+A + YL + + VH D++++N+L++ VSDF +++ L D
Sbjct: 123 MLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 641 GTHGNV---APELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 678
G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
Query: 549 FIVYEYLESGSLDKILNNDASAKE-LGWTQRLNVIKGVADALFYLH--NNCFPPIVHWDI 605
+IV EY E G L ++ ++ L L V+ + AL H ++ ++H D+
Sbjct: 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 142
Query: 606 SSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
NV LD + DF +A+ LN D+S GT ++PE M EK D++S
Sbjct: 143 KPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 666 GVLALEV 672
G L E+
Sbjct: 203 GCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
Query: 549 FIVYEYLESGSLDKILNNDASAKE-LGWTQRLNVIKGVADALFYLH--NNCFPPIVHWDI 605
+IV EY E G L ++ ++ L L V+ + AL H ++ ++H D+
Sbjct: 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 142
Query: 606 SSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
NV LD + DF +A+ LN D+S GT ++PE M EK D++S
Sbjct: 143 KPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 666 GVLALEV 672
G L E+
Sbjct: 203 GCLLYEL 209
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 23/192 (11%)
Query: 550 IVYEYLESGSLDKILNNDAS--AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
+V+E++E G L L A E L+V +G+A YL C ++H D+++
Sbjct: 82 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC---VIHRDLAA 134
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYS 664
+N L+ VSDF + +F+ D ++ GT V +PE+ + + K DV+S
Sbjct: 135 RNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 192
Query: 665 FGVLALEVI-KGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCL 723
FGVL EV +GK P + RL P L + + Q+ C
Sbjct: 193 FGVLMWEVFSEGKIPYENRSNSEVVEDISTGF----RLYKPRLASTH----VYQIMNHCW 244
Query: 724 DQNPVSRPTMKR 735
+ P RP R
Sbjct: 245 RERPEDRPAFSR 256
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 83/203 (40%), Gaps = 30/203 (14%)
Query: 501 NDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHPRQ 547
DFD +GKG G+VY+AR + I A+K F + L SH R
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 548 SFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNN 595
I VY LE L + + I +A+AL Y H+
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 596 CFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMK 655
++H DI +N+LL E ++DF + ++ SS + L GT + PE+
Sbjct: 132 ---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 656 VTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + G P
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 85/208 (40%), Gaps = 36/208 (17%)
Query: 501 NDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPDNFCSHP------------- 545
+DFD +GKG G+VY+AR + I A+K F S L H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 546 -------------RQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYL 592
++ +++ E+ G L K L E + ++ +ADAL Y
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHYC 131
Query: 593 HNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAY 652
H ++H DI +N+L+ E ++DF + ++ S + GT + PE+
Sbjct: 132 HER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIE 186
Query: 653 TMKVTEKCDVYSFGVLALEVIKGKHPRD 680
EK D++ GVL E + G P D
Sbjct: 187 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 85/208 (40%), Gaps = 36/208 (17%)
Query: 501 NDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPDNFCSHP------------- 545
+DFD +GKG G+VY+AR + I A+K F S L H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 546 -------------RQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYL 592
++ +++ E+ G L K L E + ++ +ADAL Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHYC 130
Query: 593 HNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAY 652
H ++H DI +N+L+ E ++DF + ++ S + GT + PE+
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 653 TMKVTEKCDVYSFGVLALEVIKGKHPRD 680
EK D++ GVL E + G P D
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 85/208 (40%), Gaps = 36/208 (17%)
Query: 501 NDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPDNFCSHP------------- 545
+DFD +GKG G+VY+AR + I A+K F S L H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 546 -------------RQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYL 592
++ +++ E+ G L K L E + ++ +ADAL Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHYC 130
Query: 593 HNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAY 652
H ++H DI +N+L+ E ++DF + ++ S + GT + PE+
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 653 TMKVTEKCDVYSFGVLALEVIKGKHPRD 680
EK D++ GVL E + G P D
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 24/213 (11%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L + K L Q +++ +A + Y+ + VH D+++
Sbjct: 88 YIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLAAA 143
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ V+DF +A+ + + + ++ G + APE A + T K DV+SF
Sbjct: 144 NILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 666 GVLALEV-IKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLD 724
G+L E+ KG+ P R+P P + S+ + C
Sbjct: 202 GILLTELTTKGRVP----YPGMVNREVLDQVERGYRMPCPPECPE----SLHDLMCQCWR 253
Query: 725 QNPVSRPTMKRFEV------QSKQFHYNPDHNV 751
++P RPT + + S + Y P N+
Sbjct: 254 KDPEERPTFEYLQAFLEDYFTSTEPQYQPGENL 286
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L + + K L Q +++ +A + Y+ + VH D+ +
Sbjct: 81 YIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAA 136
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ V+DF +A+ + + + ++ G + APE A + T K DV+SF
Sbjct: 137 NILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 194
Query: 666 GVLALEV-IKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLD 724
G+L E+ KG+ P R+P P + S+ + C
Sbjct: 195 GILLTELTTKGRVP----YPGMVNREVLDQVERGYRMPCPPECPE----SLHDLMCQCWR 246
Query: 725 QNPVSRPTMKRFEV------QSKQFHYNPDHNV 751
+ P RPT + + S + Y P N+
Sbjct: 247 KEPEERPTFEYLQAFLEDYFTSTEPQYQPGENL 279
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 82/203 (40%), Gaps = 30/203 (14%)
Query: 501 NDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKK-FHSPLPD-----------NFCSHPRQ 547
DFD +GKG G+VY+AR + I A+K F + L SH R
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 548 SFI------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNN 595
I VY LE L + + I +A+AL Y H+
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 596 CFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMK 655
++H DI +N+LL E ++DF + ++ SS L GT + PE+
Sbjct: 132 ---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGRM 186
Query: 656 VTEKCDVYSFGVLALEVIKGKHP 678
EK D++S GVL E + G P
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 15/186 (8%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EYL GS +L L T +++ + L YLH+ +H DI +
Sbjct: 93 WIIMEYLGGGSALDLLKPGP----LEETYIATILREILKGLDYLHSER---KIHRDIKAA 145
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
NVLL + ++DF +A L + GT +APE+ K D++S G+
Sbjct: 146 NVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGIT 205
Query: 669 ALEVIKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPV 728
A+E+ KG+ P P+L+ Q+ + +CL+++P
Sbjct: 206 AIELAKGEPPNSDLHPMRVLFLIPKNSP-------PTLEGQHS-KPFKEFVEACLNKDPR 257
Query: 729 SRPTMK 734
RPT K
Sbjct: 258 FRPTAK 263
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 23/147 (15%)
Query: 550 IVYEYLESGSLDKILNN---DA----------SAKELGWTQRLNVIKGVADALFYLHNNC 596
+V+EY++ G L+K L DA + ELG +Q L++ +A + YL +
Sbjct: 94 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH 153
Query: 597 FPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH----GNVAPELAY 652
F VH D++++N L+ + DF +++ ++ S+++ ++ G + PE
Sbjct: 154 F---VHRDLATRNCLVGANLLVKIGDFGMSR--DVYSTDYYRVGGHTMLPIRWMPPESIM 208
Query: 653 TMKVTEKCDVYSFGVLALEVIK-GKHP 678
K T + DV+SFGV+ E+ GK P
Sbjct: 209 YRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L + K L Q +++ +A + Y+ + VH D+ +
Sbjct: 77 YIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAA 132
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ V+DF +A+ + + + ++ G + APE A + T K DV+SF
Sbjct: 133 NILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 190
Query: 666 GVLALEV-IKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLD 724
G+L E+ KG+ P R+P P + S+ + C
Sbjct: 191 GILLTELTTKGRVP----YPGMVNREVLDQVERGYRMPCPPECPE----SLHDLMCQCWR 242
Query: 725 QNPVSRPTMKRFEV------QSKQFHYNPDHNV 751
++P RPT + + S + Y P N+
Sbjct: 243 KDPEERPTFEYLQAFLEDYFTSTEPQYQPGENL 275
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 18/156 (11%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHG 644
VA + YL F VH D++++N +LD + V+DF +A+ + LD +S H
Sbjct: 133 VARGMEYLAEQKF---VHRDLAARNCMLDESFTVKVADFGLARDI-LDREYYSVQQHRHA 188
Query: 645 NV-----APELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDXXXXXXXXXXXXXXXXXD 698
+ A E T + T K DV+SFGVL E++ +G P
Sbjct: 189 RLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP----YRHIDPFDLTHFLAQG 244
Query: 699 SRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMK 734
RLP P S+ QV C + +P RPT +
Sbjct: 245 RRLPQPEYCPD----SLYQVMQQCWEADPAVRPTFR 276
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L + K L Q +++ +A + Y+ + VH D+ +
Sbjct: 88 YIVIEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAA 143
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ V+DF +A+ + + + ++ G + APE A + T K DV+SF
Sbjct: 144 NILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 666 GVLALEV-IKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLD 724
G+L E+ KG+ P R+P P + S+ + C
Sbjct: 202 GILLTELTTKGRVP----YPGMVNREVLDQVERGYRMPCPPECPE----SLHDLMCQCWR 253
Query: 725 QNPVSRPTMKRFEV------QSKQFHYNPDHNV 751
++P RPT + + S + Y P N+
Sbjct: 254 KDPEERPTFEYLQAFLEDYFTSTEPQYQPGENL 286
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 36/206 (17%)
Query: 501 NDFDAKHCIGKGGHGSVYIARVPSGEIFAVKK--FHSPLPDNFCSHP------------- 545
+DF+ +GKG G+VY+AR K F S + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 546 -------------RQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYL 592
R+ +++ EY G L K L + E + +++ +ADAL Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDE---QRTATIMEELADALMYC 139
Query: 593 HNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAY 652
H ++H DI +N+LL L E ++DF + ++ S + GT + PE+
Sbjct: 140 HGK---KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIE 194
Query: 653 TMKVTEKCDVYSFGVLALEVIKGKHP 678
EK D++ GVL E++ G P
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L + K L Q +++ +A + Y+ + VH D+ +
Sbjct: 79 YIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAA 134
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ V+DF +A+ + + + ++ G + APE A + T K DV+SF
Sbjct: 135 NILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 192
Query: 666 GVLALEV-IKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLD 724
G+L E+ KG+ P R+P P + S+ + C
Sbjct: 193 GILLTELTTKGRVP----YPGMVNREVLDQVERGYRMPCPPECPE----SLHDLMCQCWR 244
Query: 725 QNPVSRPTMKRFEV------QSKQFHYNPDHNV 751
++P RPT + + S + Y P N+
Sbjct: 245 KDPEERPTFEYLQAFLEDYFTSTEPQYQPGENL 277
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 501 NDFDAKHCIGKGGHGSVYIARVP-SGEIFAVK--------------------------KF 533
++F+ +GKG G V +ARV +G+++AVK +
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 534 HSPLPDNFC--SHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFY 591
H L FC P + F V E++ G L + + ++ + + AL +
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARFYAAEIISALMF 139
Query: 592 LHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELA 651
LH+ I++ D+ NVLLD ++DF + K + + GT +APE+
Sbjct: 140 LHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEIL 196
Query: 652 YTMKVTEKCDVYSFGVLALEVIKGKHP 678
M D ++ GVL E++ G P
Sbjct: 197 QEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L + K L Q +++ +A + Y+ + VH D+ +
Sbjct: 88 YIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAA 143
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ V+DF +A+ + + + ++ G + APE A + T K DV+SF
Sbjct: 144 NILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 666 GVLALEV-IKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLD 724
G+L E+ KG+ P R+P P + S+ + C
Sbjct: 202 GILLTELTTKGRVP----YPGMVNREVLDQVERGYRMPCPPECPE----SLHDLMCQCWR 253
Query: 725 QNPVSRPTMKRFEV------QSKQFHYNPDHNV 751
++P RPT + + S + Y P N+
Sbjct: 254 KDPEERPTFEYLQAFLEDYFTSTEPQYQPGENL 286
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L + K L Q +++ +A + Y+ + VH D+ +
Sbjct: 88 YIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAA 143
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ V+DF +A+ + + + ++ G + APE A + T K DV+SF
Sbjct: 144 NILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 666 GVLALEV-IKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLD 724
G+L E+ KG+ P R+P P + S+ + C
Sbjct: 202 GILLTELTTKGRVP----YPGMVNREVLDQVERGYRMPCPPECPE----SLHDLMCQCWR 253
Query: 725 QNPVSRPTMKRFEV------QSKQFHYNPDHNV 751
++P RPT + + S + Y P N+
Sbjct: 254 KDPEERPTFEYLQAFLEDYFTSTEPQYQPGENL 286
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 87/209 (41%), Gaps = 40/209 (19%)
Query: 495 EIIR--ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-----NFCSHP-- 545
+I+R T F H I +G Y +V EI K D + +HP
Sbjct: 9 QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFI 68
Query: 546 ----------RQSFIVYEYLESGSLDKILNNDASAKELGWTQRLN--VIKGVAD----AL 589
+Q F++ +Y+E G L +L +QR V K A AL
Sbjct: 69 IRMWGTFQDAQQIFMIMDYIEGGELFSLLRK---------SQRFPNPVAKFYAAEVCLAL 119
Query: 590 FYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE 649
YLH+ I++ D+ +N+LLD ++DF AK++ L GT +APE
Sbjct: 120 EYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV---PDVTYXLCGTPDYIAPE 173
Query: 650 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ T + D +SFG+L E++ G P
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 11/135 (8%)
Query: 549 FIVYEYLESGSLDKIL-NNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
IV E +E+GSLD L +DA + Q + +++G+A + YL + VH D+++
Sbjct: 122 MIVTEXMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGMKYLSDMG---AVHRDLAA 175
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYS 664
+N+L++ VSDF +++ L D G + +PE K T DV+S
Sbjct: 176 RNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS 235
Query: 665 FGVLALEVIK-GKHP 678
+G++ EV+ G+ P
Sbjct: 236 YGIVLWEVMSYGERP 250
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L + + K L Q +++ +A + Y+ + VH D+ +
Sbjct: 254 YIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAA 309
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ V+DF +A+ + + + ++ G + APE A + T K DV+SF
Sbjct: 310 NILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367
Query: 666 GVLALEV-IKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLD 724
G+L E+ KG+ P R+P P + S+ + C
Sbjct: 368 GILLTELTTKGRVP----YPGMVNREVLDQVERGYRMPCPPECPE----SLHDLMCQCWR 419
Query: 725 QNPVSRPTMKRFEV------QSKQFHYNPDHNV 751
+ P RPT + + S + Y P N+
Sbjct: 420 KEPEERPTFEYLQAFLEDYFTSTEPQYQPGENL 452
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L + K L Q +++ +A + Y+ + VH D+ +
Sbjct: 88 YIVCEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAA 143
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ V+DF +A+ + + + ++ G + APE A + T K DV+SF
Sbjct: 144 NILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 666 GVLALEV-IKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLD 724
G+L E+ KG+ P R+P P + S+ + C
Sbjct: 202 GILLTELTTKGRVP----YPGMVNREVLDQVERGYRMPCPPECPE----SLHDLMCQCWR 253
Query: 725 QNPVSRPTMKRFEV------QSKQFHYNPDHNV 751
++P RPT + + S + Y P N+
Sbjct: 254 KDPEERPTFEYLQAFLEDYFTSTEPQYQPGENL 286
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Query: 549 FIVYEYLESGSLDKILNNDASAKE-LGWTQRLNVIKGVADALFYLH--NNCFPPIVHWDI 605
+IV EY E G L ++ ++ L L V+ + AL H ++ ++H D+
Sbjct: 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 142
Query: 606 SSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
NV LD + DF +A+ LN D + GT ++PE M EK D++S
Sbjct: 143 KPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 666 GVLALEV 672
G L E+
Sbjct: 203 GCLLYEL 209
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L + + K L Q +++ +A + Y+ + VH D+ +
Sbjct: 85 YIVTEYMNKGSLLDFLKGE-TGKYLRLPQLVDMSAQIASGMAYVERMNY---VHRDLRAA 140
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ V+DF +A+ + + + ++ G + APE A + T K DV+SF
Sbjct: 141 NILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 198
Query: 666 GVLALEV-IKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLD 724
G+L E+ KG+ P R+P P + S+ + C
Sbjct: 199 GILLTELTTKGRVP----YPGMVNREVLDQVERGYRMPCPPECPE----SLHDLMCQCWR 250
Query: 725 QNPVSRPTMKRFEV------QSKQFHYNPDHNV 751
+ P RPT + + S + Y P N+
Sbjct: 251 KEPEERPTFEYLQAFLEDYFTSTEPQYQPGENL 283
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 487 LLGKIVYEEIIRATNDFDAKH-CIGKGGHGSVYIARVPSGEI--------FAVKKFHSPL 537
+LG+ + ++++A N D+++ I K H ++ + S + + V+ + + L
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 538 PDNFCSHPRQS-------FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALF 590
P + FI EY E+G+L +++++ ++ RL + + +AL
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL--FRQILEALS 130
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAK-------FLNLDSSNWSKLAGTH 643
Y+H+ I+H D+ N+ +D + DF +AK L LDS N L G+
Sbjct: 131 YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN---LPGSS 184
Query: 644 GNVAPELAYTMKVT-----------EKCDVYSFGVLALEVI 673
N+ + M V EK D+YS G++ E+I
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 82/193 (42%), Gaps = 23/193 (11%)
Query: 550 IVYEYLESGSLDKILNNDAS--AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
+V E++E G L L A E L+V +G+A YL C ++H D+++
Sbjct: 80 LVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC---VIHRDLAA 132
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYS 664
+N L+ VSDF + +F+ D ++ GT V +PE+ + + K DV+S
Sbjct: 133 RNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 190
Query: 665 FGVLALEVI-KGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCL 723
FGVL EV +GK P + RL P L + + Q+ C
Sbjct: 191 FGVLMWEVFSEGKIPYENRSNSEVVEDISTGF----RLYKPRLASTH----VYQIMNHCW 242
Query: 724 DQNPVSRPTMKRF 736
+ P RP R
Sbjct: 243 RERPEDRPAFSRL 255
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 68/151 (45%), Gaps = 4/151 (2%)
Query: 279 PQLQYLDLSSNYIVG-EIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSAN 337
P ++YL L N + +L N+ YL L+GN+L G L NL+ L L N
Sbjct: 63 PNVRYLALGGNKLHDISALKELTNLTYL---ILTGNQLQSLPNGVFDKLTNLKELVLVEN 119
Query: 338 HLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICR 397
L + L L YL L HN+L D L +L+ LDL +N L +
Sbjct: 120 QLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDK 179
Query: 398 MESLEKLNLSYNNLSGLIPRCFEELHGLLHI 428
+ L++L+L+ N L + F+ L L HI
Sbjct: 180 LTQLKQLSLNDNQLKSVPDGVFDRLTSLTHI 210
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Query: 299 LGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNL 358
L N+ YL +L GNKL L L NL YL L+ N L + L L L L
Sbjct: 62 LPNVRYL---ALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116
Query: 359 SHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRC 418
N+L D L +L+ L L HN L ++ +L +L+L N L L
Sbjct: 117 VENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGV 176
Query: 419 FEELHGLLHIDISYNKLE 436
F++L L + ++ N+L+
Sbjct: 177 FDKLTQLKQLSLNDNQLK 194
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 30/136 (22%)
Query: 108 FPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXXXXRN 167
P++ YL L N+L DI + L+ L YL N+L
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQ--------------------- 98
Query: 168 QLNGSIPHEV-GQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQI- 225
S+P+ V +L L L+L N L TNL +LYLY+N S+P+ +
Sbjct: 99 ----SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQ-SLPKGVF 153
Query: 226 GNLKSLFDMKLCINQL 241
L +L + L NQL
Sbjct: 154 DKLTNLTRLDLDNNQL 169
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 105/268 (39%), Gaps = 44/268 (16%)
Query: 501 NDFDAKHCIGKGGHGSVY-IARVPSGEIFAVKKFHSPLPDNF-------------CSHPR 546
+DF+ +G G G V+ ++ PSG + A K H + C+ P
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 547 ------------QSFIVYEYLESGSLDKILNNDASAKE--LGWTQRLNVIKGVADALFYL 592
+ I E+++ GSLD++L E LG + VIKG L YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS-IAVIKG----LTYL 123
Query: 593 HNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAY 652
I+H D+ N+L++ E + DF ++ L + +N + GT ++PE
Sbjct: 124 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN--EFVGTRSYMSPERLQ 179
Query: 653 TMKVTEKCDVYSFGVLALEVIKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKF 712
+ + D++S G+ +E+ G++PR P P L
Sbjct: 180 GTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNE-------PPPKLPSAVFS 232
Query: 713 MSIMQVAFSCLDQNPVSRPTMKRFEVQS 740
+ CL +NP R +K+ V +
Sbjct: 233 LEFQDFVNKCLIKNPAERADLKQLMVHA 260
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 22/212 (10%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L + K L Q +++ +A + Y+ + VH D+ +
Sbjct: 88 YIVIEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAA 143
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTEKCDVYSFG 666
N+L+ V+DF +A+ + D+ ++ APE A + T K DV+SFG
Sbjct: 144 NILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 667 VLALEV-IKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLDQ 725
+L E+ KG+ P R+P P + S+ + C +
Sbjct: 203 ILLTELTTKGRVP----YPGMVNREVLDQVERGYRMPCPPECPE----SLHDLMCQCWRK 254
Query: 726 NPVSRPTMKRFEV------QSKQFHYNPDHNV 751
+P RPT + + S + Y P N+
Sbjct: 255 DPEERPTFEYLQAFLEDYFTSTEPQYQPGENL 286
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 24/213 (11%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ G L L + K L Q +++ +A + Y+ + VH D+ +
Sbjct: 88 YIVMEYMSKGCLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAA 143
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ V+DF +A+ + + + ++ G + APE A + T K DV+SF
Sbjct: 144 NILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 666 GVLALEV-IKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLD 724
G+L E+ KG+ P R+P P + S+ + C
Sbjct: 202 GILLTELTTKGRVP----YPGMVNREVLDQVERGYRMPCPPECPE----SLHDLMCQCWR 253
Query: 725 QNPVSRPTMKRFEV------QSKQFHYNPDHNV 751
++P RPT + + S + Y P N+
Sbjct: 254 KDPEERPTFEYLQAFLEDYFTSTEPQYQPGENL 286
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 37/210 (17%)
Query: 501 NDFDAKHCIGKGGHGSVYIA-RVPSGEIFAVK---------------------------- 531
DF+ +GKG G V +A R + E++A+K
Sbjct: 19 TDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDK 78
Query: 532 -KFHSPLPDNFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALF 590
F + L F + R F++ EY+ G L + KE Q + ++ LF
Sbjct: 79 PPFLTQLHSCFQTVDRLYFVM-EYVNGGDLMYHIQQVGKFKE---PQAVFYAAEISIGLF 134
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
+LH I++ D+ NV+LD ++DF + K +D + GT +APE+
Sbjct: 135 FLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEI 191
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHPRD 680
+ D +++GVL E++ G+ P D
Sbjct: 192 IAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L + + K L Q +++ +A + Y+ + VH D+ +
Sbjct: 337 YIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAA 392
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ V+DF +A+ + + + ++ G + APE A + T K DV+SF
Sbjct: 393 NILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 450
Query: 666 GVLALE-VIKGKHP 678
G+L E KG+ P
Sbjct: 451 GILLTELTTKGRVP 464
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 24/213 (11%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ G L L + K L Q +++ +A + Y+ + VH D+ +
Sbjct: 88 YIVTEYMSKGCLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAA 143
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ V+DF +A+ + + + ++ G + APE A + T K DV+SF
Sbjct: 144 NILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 666 GVLALEV-IKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLD 724
G+L E+ KG+ P R+P P + S+ + C
Sbjct: 202 GILLTELTTKGRVP----YPGMVNREVLDQVERGYRMPCPPECPE----SLHDLMCQCWR 253
Query: 725 QNPVSRPTMKRFEV------QSKQFHYNPDHNV 751
++P RPT + + S + Y P N+
Sbjct: 254 KDPEERPTFEYLQAFLEDYFTSTEPQYQPGENL 286
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L + + K L Q +++ +A + Y+ + VH D+ +
Sbjct: 254 YIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAA 309
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ V+DF +A+ + + + ++ G + APE A + T K DV+SF
Sbjct: 310 NILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367
Query: 666 GVLALEV-IKGKHP 678
G+L E+ KG+ P
Sbjct: 368 GILLTELTTKGRVP 381
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
++V EY+E +L + + S L +N + D + + H+ IVH DI +
Sbjct: 87 YLVMEYIEGPTLSEYIE---SHGPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQ 140
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDS-SNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGV 667
N+L+D + DF IAK L+ S + + + GT +PE A E D+YS G+
Sbjct: 141 NILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGI 200
Query: 668 LALEVIKGKHP 678
+ E++ G+ P
Sbjct: 201 VLYEMLVGEPP 211
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 114/277 (41%), Gaps = 55/277 (19%)
Query: 501 NDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVK-----KFHSPLPD--------NFCSHPR 546
+D++ + IG G V A P E A+K K + + + + C HP
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 547 ------------QSFIVYEYLESGSLDKILNNDASAKE-----LGWTQRLNVIKGVADAL 589
+ ++V + L GS+ I+ + + E L + +++ V + L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 590 FYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL----NLDSSNWSK-LAGTHG 644
YLH N +H D+ + N+LL ++DF ++ FL ++ + K GT
Sbjct: 135 EYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 645 NVAPELAYTMKVTE-KCDVYSFGVLALEVIKGKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
+APE+ ++ + K D++SFG+ A+E+ G P
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP------- 244
Query: 704 PSLD--VQNKFM------SIMQVAFSCLDQNPVSRPT 732
PSL+ VQ+K M S ++ CL ++P RPT
Sbjct: 245 PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 281
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 7/124 (5%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L + + LG L V +A+ YL N F VH D++++
Sbjct: 263 YIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNF---VHRDLAAR 318
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
NVL+ A VSDF + K + + + KL APE K + K DV+SFG+L
Sbjct: 319 NVLVSEDNVAKVSDFGLTKEAS-STQDTGKLPVKW--TAPEALREKKFSTKSDVWSFGIL 375
Query: 669 ALEV 672
E+
Sbjct: 376 LWEI 379
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 7/124 (5%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L + + LG L V +A+ YL N F VH D++++
Sbjct: 76 YIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNF---VHRDLAAR 131
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
NVL+ A VSDF + K + + + KL APE K + K DV+SFG+L
Sbjct: 132 NVLVSEDNVAKVSDFGLTKEAS-STQDTGKLPVKW--TAPEALREKKFSTKSDVWSFGIL 188
Query: 669 ALEV 672
E+
Sbjct: 189 LWEI 192
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 7/124 (5%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L + + LG L V +A+ YL N F VH D++++
Sbjct: 91 YIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNF---VHRDLAAR 146
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
NVL+ A VSDF + K + + + KL APE K + K DV+SFG+L
Sbjct: 147 NVLVSEDNVAKVSDFGLTKEAS-STQDTGKLPVKW--TAPEALREKKFSTKSDVWSFGIL 203
Query: 669 ALEV 672
E+
Sbjct: 204 LWEI 207
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 114/277 (41%), Gaps = 55/277 (19%)
Query: 501 NDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVK-----KFHSPLPD--------NFCSHPR 546
+D++ + IG G V A P E A+K K + + + + C HP
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 547 ------------QSFIVYEYLESGSLDKILNNDASAKE-----LGWTQRLNVIKGVADAL 589
+ ++V + L GS+ I+ + + E L + +++ V + L
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 590 FYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL----NLDSSNWSK-LAGTHG 644
YLH N +H D+ + N+LL ++DF ++ FL ++ + K GT
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 645 NVAPELAYTMKVTE-KCDVYSFGVLALEVIKGKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
+APE+ ++ + K D++SFG+ A+E+ G P
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP------- 239
Query: 704 PSLD--VQNKFM------SIMQVAFSCLDQNPVSRPT 732
PSL+ VQ+K M S ++ CL ++P RPT
Sbjct: 240 PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 276
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 22/211 (10%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
IV EY+ GSL L + + K L Q +++ +A + Y+ + VH D+ + N
Sbjct: 79 IVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAAN 134
Query: 610 VLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTEKCDVYSFGV 667
+L+ V+DF +A+ + D+ ++ APE A + T K DV+SFG+
Sbjct: 135 ILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 193
Query: 668 LALEV-IKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLDQN 726
L E+ KG+ P R+P P + S+ + C +
Sbjct: 194 LLTELTTKGRVP----YPGMVNREVLDQVERGYRMPCPPECPE----SLHDLMCQCWRKE 245
Query: 727 PVSRPTMKRFEV------QSKQFHYNPDHNV 751
P RPT + + S + Y P N+
Sbjct: 246 PEERPTFEYLQAFLEDYFTSTEPQYQPGENL 276
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 23/192 (11%)
Query: 550 IVYEYLESGSLDKILNNDAS--AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
+V+E++E G L L A E L+V +G+A YL ++H D+++
Sbjct: 79 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEE---ASVIHRDLAA 131
Query: 608 KNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYS 664
+N L+ VSDF + +F+ D ++ GT V +PE+ + + K DV+S
Sbjct: 132 RNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 665 FGVLALEVI-KGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCL 723
FGVL EV +GK P + RL P L + + Q+ C
Sbjct: 190 FGVLMWEVFSEGKIPYENRSNSEVVEDISTGF----RLYKPRLASTH----VYQIMNHCW 241
Query: 724 DQNPVSRPTMKR 735
+ P RP R
Sbjct: 242 KERPEDRPAFSR 253
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L + + K L Q +++ +A + Y+ + VH D+ +
Sbjct: 254 YIVGEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAA 309
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ V+DF +A+ + + + ++ G + APE A + T K DV+SF
Sbjct: 310 NILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367
Query: 666 GVLALEV-IKGKHP 678
G+L E+ KG+ P
Sbjct: 368 GILLTELTTKGRVP 381
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 549 FIVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
+IV E E G L ++I++ A K L ++K + +AL Y H+ +VH D+
Sbjct: 96 YIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKP 152
Query: 608 KNVLL-DLGYEAHVS--DFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYS 664
+N+L D + + DF +A+ D + + AGT +APE+ + VT KCD++S
Sbjct: 153 ENILFQDTSPHSPIKIIDFGLAELFKSDEHS-TNAAGTALYMAPEV-FKRDVTFKCDIWS 210
Query: 665 FGVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 211 AGVVMYFLLTGCLP 224
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 26/170 (15%)
Query: 265 NNITGNIP-FEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGEL 323
NN +IP + P L+ LDL +L + Y++ + G
Sbjct: 116 NNPIESIPSYAFNRVPSLRRLDLG----------ELKRLEYISEAAFEG----------- 154
Query: 324 GSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLS 383
L+NL YL+L +L + + +L +LV+L L LS N+L P L L +L L
Sbjct: 155 --LVNLRYLNLGMCNLKD--IPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLM 210
Query: 384 HNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYN 433
H + + ++SLE+LNLS+NNL L F LH L + +++N
Sbjct: 211 HAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 260
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 33/207 (15%)
Query: 502 DFDAKHCIGKGGHGSVYIAR-VPSGEIFAVK--------------------KFHSPLPD- 539
DF + +GKG VY A + +G A+K K H L
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 540 ------NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH 593
N+ ++V E +G +++ L N K + + + + + YLH
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN--RVKPFSENEARHFMHQIITGMLYLH 129
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
++ I+H D++ N+LL ++DF +A L + L GT ++PE+A
Sbjct: 130 SH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATR 186
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHPRD 680
+ DV+S G + ++ G+ P D
Sbjct: 187 SAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 40/209 (19%)
Query: 501 NDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVK---------------------------- 531
NDFD +GKG G V + R +G +A+K
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 532 KFHSPLPDNFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKG--VADAL 589
F + L F +H R F++ EY G L L ++E +T+ G + AL
Sbjct: 65 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 118
Query: 590 FYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE 649
YLH+ +V+ DI +N++LD ++DF + K D + GT +APE
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 650 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ D + GV+ E++ G+ P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 87/218 (39%), Gaps = 37/218 (16%)
Query: 493 YEEIIRATNDFDAKHCIGK-GGHGSVYIARVPSGEIFAVKKF-----HSPLPDNF----- 541
YE + R N D IG+ G G VY A+ + A K L D
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI 60
Query: 542 ---CSHPR------------QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVA 586
C HP +I+ E+ G++D ++ + L +Q V K
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTL 118
Query: 587 DALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRI-AKFLNLDSSNWSKLAGTHGN 645
DAL YLH+N I+H D+ + N+L L + ++DF + AK GT
Sbjct: 119 DALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYW 175
Query: 646 VAPELAYTMKVTE-----KCDVYSFGVLALEVIKGKHP 678
+APE+ + K DV+S G+ +E+ + + P
Sbjct: 176 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 40/209 (19%)
Query: 501 NDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVK---------------------------- 531
NDFD +GKG G V + R +G +A+K
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 532 KFHSPLPDNFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKG--VADAL 589
F + L F +H R F++ EY G L L ++E +T+ G + AL
Sbjct: 65 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 118
Query: 590 FYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE 649
YLH+ +V+ DI +N++LD ++DF + K D + GT +APE
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 650 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ D + GV+ E++ G+ P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 40/209 (19%)
Query: 501 NDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVK---------------------------- 531
NDFD +GKG G V + R +G +A+K
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 532 KFHSPLPDNFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKG--VADAL 589
F + L F +H R F++ EY G L L ++E +T+ G + AL
Sbjct: 68 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 121
Query: 590 FYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE 649
YLH+ +V+ DI +N++LD ++DF + K D + GT +APE
Sbjct: 122 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 178
Query: 650 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ D + GV+ E++ G+ P
Sbjct: 179 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 40/209 (19%)
Query: 501 NDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVK---------------------------- 531
NDFD +GKG G V + R +G +A+K
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 532 KFHSPLPDNFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKG--VADAL 589
F + L F +H R F++ EY G L L ++E +T+ G + AL
Sbjct: 65 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 118
Query: 590 FYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE 649
YLH+ +V+ DI +N++LD ++DF + K D + GT +APE
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 650 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ D + GV+ E++ G+ P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 26/170 (15%)
Query: 265 NNITGNIP-FEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGEL 323
NN +IP + P L+ LDL +L + Y++ + G
Sbjct: 116 NNPIESIPSYAFNRVPSLRRLDLG----------ELKRLEYISEAAFEG----------- 154
Query: 324 GSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLS 383
L+NL YL+L +L + + +L +LV+L L LS N+L P L L +L L
Sbjct: 155 --LVNLRYLNLGMCNLKD--IPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLM 210
Query: 384 HNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYN 433
H + + ++SLE+LNLS+NNL L F LH L + +++N
Sbjct: 211 HAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 260
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 40/209 (19%)
Query: 501 NDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVK---------------------------- 531
NDFD +GKG G V + R +G +A+K
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 532 KFHSPLPDNFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKG--VADAL 589
F + L F +H R F++ EY G L L ++E +T+ G + AL
Sbjct: 65 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 118
Query: 590 FYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE 649
YLH+ +V+ DI +N++LD ++DF + K D + GT +APE
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 650 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ D + GV+ E++ G+ P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 40/209 (19%)
Query: 501 NDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVK---------------------------- 531
NDFD +GKG G V + R +G +A+K
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 532 KFHSPLPDNFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKG--VADAL 589
F + L F +H R F++ EY G L L ++E +T+ G + AL
Sbjct: 65 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 118
Query: 590 FYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE 649
YLH+ +V+ DI +N++LD ++DF + K D + GT +APE
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 650 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ D + GV+ E++ G+ P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 97/221 (43%), Gaps = 42/221 (19%)
Query: 487 LLGKIVYEEIIRATNDFDAKH-CIGKGGHGSVYIARVPSGEI--------FAVKKFHSPL 537
+LG+ + ++++A N D+++ I K H ++ + S + + V+ + + L
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 538 PDNFCSHPRQS-------FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALF 590
P + FI EY E+ +L +++++ ++ RL + + +AL
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL--FRQILEALS 130
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAK-------FLNLDSSNWSKLAGTH 643
Y+H+ I+H D+ N+ +D + DF +AK L LDS N L G+
Sbjct: 131 YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN---LPGSS 184
Query: 644 GNVAPELAYTMKVT-----------EKCDVYSFGVLALEVI 673
N+ + M V EK D+YS G++ E+I
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 38/219 (17%)
Query: 493 YEEIIRATNDFDAKHCIGK---GGHGSVYIARVPSGEIFAVKKF-----HSPLPDNF--- 541
YE + R N D IG+ G G VY A+ + A K L D
Sbjct: 26 YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
Query: 542 -----CSHPR------------QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKG 584
C HP +I+ E+ G++D ++ + L +Q V K
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQ 143
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHG 644
DAL YLH+N I+H D+ + N+L L + ++DF ++ GT
Sbjct: 144 TLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPY 200
Query: 645 NVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGKHP 678
+APE+ + K DV+S G+ +E+ + + P
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 38/213 (17%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILNNDASA---KELGWTQRL--------NVIKGVADALF 590
C+H ++ EY G L L A A KE G L V +G+A F
Sbjct: 111 CTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMA---F 167
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN----- 645
NC +H D++++NVLL G+ A + DF +A+ + DS+ K GN
Sbjct: 168 LASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK-----GNARLPV 218
Query: 646 --VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLP 702
+APE + T + DV+S+G+L E+ G +P ++
Sbjct: 219 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP---YPGILVNSKFYKLVKDGYQMA 275
Query: 703 YPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKR 735
P+ +N + SIMQ +C P RPT ++
Sbjct: 276 QPAFAPKNIY-SIMQ---ACWALEPTHRPTFQQ 304
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L + + LG L V +A+ YL N F VH D++++
Sbjct: 82 YIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNF---VHRDLAAR 137
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
NVL+ A VSDF + K + + + KL APE + K DV+SFG+L
Sbjct: 138 NVLVSEDNVAKVSDFGLTKEAS-STQDTGKLPVKW--TAPEALREAAFSTKSDVWSFGIL 194
Query: 669 ALEV 672
E+
Sbjct: 195 LWEI 198
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 38/219 (17%)
Query: 493 YEEIIRATNDFDAKHCIGK---GGHGSVYIARVPSGEIFAVKKF-----HSPLPDNF--- 541
YE + R N D IG+ G G VY A+ + A K L D
Sbjct: 26 YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
Query: 542 -----CSHPR------------QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKG 584
C HP +I+ E+ G++D ++ + L +Q V K
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQ 143
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHG 644
DAL YLH+N I+H D+ + N+L L + ++DF ++ GT
Sbjct: 144 TLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPY 200
Query: 645 NVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGKHP 678
+APE+ + K DV+S G+ +E+ + + P
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 38/219 (17%)
Query: 493 YEEIIRATNDFDAKHCIGK---GGHGSVYIARVPSGEIFAVKKF-----HSPLPDNF--- 541
YE + R N D IG+ G G VY A+ + A K L D
Sbjct: 26 YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
Query: 542 -----CSHPR------------QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKG 584
C HP +I+ E+ G++D ++ + L +Q V K
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQ 143
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHG 644
DAL YLH+N I+H D+ + N+L L + ++DF ++ GT
Sbjct: 144 TLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPY 200
Query: 645 NVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGKHP 678
+APE+ + K DV+S G+ +E+ + + P
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 40/209 (19%)
Query: 501 NDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVK---------------------------- 531
NDFD +GKG G V + R +G +A+K
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 532 KFHSPLPDNFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKG--VADAL 589
F + L F +H R F++ EY G L L ++E +T+ G + AL
Sbjct: 70 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 123
Query: 590 FYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE 649
YLH+ +V+ DI +N++LD ++DF + K D + GT +APE
Sbjct: 124 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 180
Query: 650 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ D + GV+ E++ G+ P
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G +G V +A RV + E AVK K P+N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 119
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 103/268 (38%), Gaps = 40/268 (14%)
Query: 501 NDFDAKHCIGKGGHGSVY-IARVPSGEIFAVKKFHSPLPDNF-------------CSHP- 545
+DF+ +G G G V+ ++ PSG + A K H + C+ P
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 546 -----------RQSFIVYEYLESGSLDKILNNDASAKE--LGWTQRLNVIKGVADALFYL 592
+ I E+++ GSLD++L E LG + VIKG L YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS-IAVIKG----LTYL 139
Query: 593 HNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAY 652
I+H D+ N+L++ E + DF ++ L S + GT ++PE
Sbjct: 140 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQ 195
Query: 653 TMKVTEKCDVYSFGVLALEVIKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKF 712
+ + D++S G+ +E+ G++P + P P L
Sbjct: 196 GTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNE---PPPKLPSGVFS 252
Query: 713 MSIMQVAFSCLDQNPVSRPTMKRFEVQS 740
+ CL +NP R +K+ V +
Sbjct: 253 LEFQDFVNKCLIKNPAERADLKQLMVHA 280
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 18/280 (6%)
Query: 173 IPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNN----SFSGSIPQQIGNL 228
+P + LN L L+L N S +NF +L LY+ N +++GNL
Sbjct: 290 LPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHLYIRGNVKKLHLGVGCLEKLGNL 349
Query: 229 KSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSS 288
++L L N + + S+ L L++S N G E PQL+ LDL+
Sbjct: 350 QTL---DLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAF 406
Query: 289 NYIVGEIP-TQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNF----- 342
+ P + N+ +L ++L+ L L L L +L+L NH +
Sbjct: 407 TRLHINAPQSPFQNLHFLQVLNLTYCFLDTSNQHLLAGLPVLRHLNLKGNHFQDGTITKT 466
Query: 343 -VLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESL 401
+L+++GSL L + + QQ +L +S +DLSHN L + ++ +
Sbjct: 467 NLLQTVGSLEVLILSSCGLLSIDQQ---AFHSLGKMSHVDLSHNSLTCDSIDSLSHLKGI 523
Query: 402 EKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPN 441
LNL+ N+++ + PR L I++S+N L+ N
Sbjct: 524 -YLNLAANSINIISPRLLPILSQQSTINLSHNPLDCTCSN 562
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 4/141 (2%)
Query: 305 LNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLS 364
L + L+ L G +P + L L+ L LS NH S + L +L + N
Sbjct: 277 LQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHLYIRGNVKK 335
Query: 365 QQIPIE-LDNLIHLSELDLSHNFL--GEKISSRICRMESLEKLNLSYNNLSGLIPRCFEE 421
+ + L+ L +L LDLSHN + + S ++ + L+ LNLS+N GL + F+E
Sbjct: 336 LHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKE 395
Query: 422 LHGLLHIDISYNKLEGHIPNS 442
L +D+++ +L + P S
Sbjct: 396 CPQLELLDLAFTRLHINAPQS 416
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 18/194 (9%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV EY+ GSL L + K L Q +++ +A + Y+ + VH D+ +
Sbjct: 255 YIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAA 310
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ V+DF + + + + + ++ G + APE A + T K DV+SF
Sbjct: 311 NILVGENLVCKVADFGLGRLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 368
Query: 666 GVLALEV-IKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLD 724
G+L E+ KG+ P R+P P + S+ + C
Sbjct: 369 GILLTELTTKGRVP----YPGMVNREVLDQVERGYRMPCPPECPE----SLHDLMCQCWR 420
Query: 725 QNPVSRPTMKRFEV 738
++P RPT + +
Sbjct: 421 KDPEERPTFEYLQA 434
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G +G V +A RV + E AVK K P+N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 118
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G +G V +A RV + E AVK K P+N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 118
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G +G V +A RV + E AVK K P+N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINAMLNH 64
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 119
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G +G V +A RV + E AVK K P+N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 118
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 38/213 (17%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILNNDASA---KELGWTQRL--------NVIKGVADALF 590
C+H ++ EY G L L A A KE G L V +G+A F
Sbjct: 119 CTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMA---F 175
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN----- 645
NC +H D++++NVLL G+ A + DF +A+ + DS+ K GN
Sbjct: 176 LASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK-----GNARLPV 226
Query: 646 --VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLP 702
+APE + T + DV+S+G+L E+ G +P ++
Sbjct: 227 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP---YPGILVNSKFYKLVKDGYQMA 283
Query: 703 YPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKR 735
P+ +N + SIMQ +C P RPT ++
Sbjct: 284 QPAFAPKNIY-SIMQ---ACWALEPTHRPTFQQ 312
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 60/195 (30%)
Query: 580 NVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKL 639
V KG+A F NC +H D++++N+LL G + DF +A+ + DS+ K
Sbjct: 176 QVAKGMA---FLASKNC----IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK- 227
Query: 640 AGTHGN-------VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDXXXXXXXXXXXX 692
GN +APE + T + DV+S+G+ E+
Sbjct: 228 ----GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS------------------ 265
Query: 693 XXXXXDSRLPYPSLDVQNKFMSIMQVAF-----------------SCLDQNPVSRPTMKR 735
PYP + V +KF +++ F +C D +P+ RPT K+
Sbjct: 266 -----LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQ 320
Query: 736 F-EVQSKQFHYNPDH 749
++ KQ + +H
Sbjct: 321 IVQLIEKQISESTNH 335
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G +G V +A RV + E AVK K P+N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 119
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G +G V +A RV + E AVK K P+N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 118
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G +G V +A RV + E AVK K P+N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 64
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 119
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G +G V +A RV + E AVK K P+N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 119
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G +G V +A RV + E AVK K P+N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 119
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G +G V +A RV + E AVK K P+N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 119
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G +G V +A RV + E AVK K P+N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 118
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G +G V +A RV + E AVK K P+N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 118
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G +G V +A RV + E AVK K P+N
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 62
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 117
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 118 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G +G V +A RV + E AVK K P+N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 118
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G +G V +A RV + E AVK K P+N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 118
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G +G V +A RV + E AVK K P+N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 118
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G +G V +A RV + E AVK K P+N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 118
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 60/195 (30%)
Query: 580 NVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKL 639
V KG+A F NC +H D++++N+LL G + DF +A+ + DS+ K
Sbjct: 153 QVAKGMA---FLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK- 204
Query: 640 AGTHGN-------VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDXXXXXXXXXXXX 692
GN +APE + T + DV+S+G+ E+
Sbjct: 205 ----GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS------------------ 242
Query: 693 XXXXXDSRLPYPSLDVQNKFMSIMQVAF-----------------SCLDQNPVSRPTMKR 735
PYP + V +KF +++ F +C D +P+ RPT K+
Sbjct: 243 -----LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQ 297
Query: 736 F-EVQSKQFHYNPDH 749
++ KQ + +H
Sbjct: 298 IVQLIEKQISESTNH 312
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G +G V +A RV + E AVK K P+N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 118
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G +G V +A RV + E AVK K P+N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 119
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
I E LE GSL +++ E + L + + L YLH+ I+H D+ + N
Sbjct: 162 IFMELLEGGSLGQLVKEQGCLPE---DRALYYLGQALEGLEYLHSR---RILHGDVKADN 215
Query: 610 VLLDL-GYEAHVSDFRIAKFLNLDSSNWSKLAG-----THGNVAPELAYTMKVTEKCDVY 663
VLL G A + DF A L D S L G T ++APE+ K DV+
Sbjct: 216 VLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVW 275
Query: 664 SFGVLALEVIKGKHP 678
S + L ++ G HP
Sbjct: 276 SSCCMMLHMLNGCHP 290
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 60/195 (30%)
Query: 580 NVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKL 639
V KG+A F NC +H D++++N+LL G + DF +A+ + DS+ K
Sbjct: 169 QVAKGMA---FLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK- 220
Query: 640 AGTHGN-------VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDXXXXXXXXXXXX 692
GN +APE + T + DV+S+G+ E+
Sbjct: 221 ----GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF------------------- 257
Query: 693 XXXXXDSRLPYPSLDVQNKFMSIMQVAF-----------------SCLDQNPVSRPTMKR 735
PYP + V +KF +++ F +C D +P+ RPT K+
Sbjct: 258 ----SLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQ 313
Query: 736 F-EVQSKQFHYNPDH 749
++ KQ + +H
Sbjct: 314 IVQLIEKQISESTNH 328
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 13/136 (9%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
F+V++ + G L L + E + ++++ + +A+ +LH N IVH D+ +
Sbjct: 176 FLVFDLMRKGELFDYLTEKVALSE---KETRSIMRSLLEAVSFLHANN---IVHRDLKPE 229
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE-LAYTMKVT-----EKCDV 662
N+LLD + +SDF + L +L GT G +APE L +M T ++ D+
Sbjct: 230 NILLDDNMQIRLSDFGFSCHLE-PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDL 288
Query: 663 YSFGVLALEVIKGKHP 678
++ GV+ ++ G P
Sbjct: 289 WACGVILFTLLAGSPP 304
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 60/195 (30%)
Query: 580 NVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKL 639
V KG+A F NC +H D++++N+LL G + DF +A+ + DS+ K
Sbjct: 171 QVAKGMA---FLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK- 222
Query: 640 AGTHGN-------VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDXXXXXXXXXXXX 692
GN +APE + T + DV+S+G+ E+
Sbjct: 223 ----GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS------------------ 260
Query: 693 XXXXXDSRLPYPSLDVQNKFMSIMQVAF-----------------SCLDQNPVSRPTMKR 735
PYP + V +KF +++ F +C D +P+ RPT K+
Sbjct: 261 -----LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQ 315
Query: 736 F-EVQSKQFHYNPDH 749
++ KQ + +H
Sbjct: 316 IVQLIEKQISESTNH 330
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 60/195 (30%)
Query: 580 NVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKL 639
V KG+A F NC +H D++++N+LL G + DF +A+ + DS+ K
Sbjct: 176 QVAKGMA---FLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK- 227
Query: 640 AGTHGN-------VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDXXXXXXXXXXXX 692
GN +APE + T + DV+S+G+ E+
Sbjct: 228 ----GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS------------------ 265
Query: 693 XXXXXDSRLPYPSLDVQNKFMSIMQVAF-----------------SCLDQNPVSRPTMKR 735
PYP + V +KF +++ F +C D +P+ RPT K+
Sbjct: 266 -----LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQ 320
Query: 736 F-EVQSKQFHYNPDH 749
++ KQ + +H
Sbjct: 321 IVQLIEKQISESTNH 335
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EY+E+GSL L + K L + L++ +A+ + ++ + +H D+ +
Sbjct: 78 YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAA 133
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ ++DF +A+ + + + ++ G + APE T K DV+SF
Sbjct: 134 NILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 191
Query: 666 GVLALEVIK-GKHP 678
G+L E++ G+ P
Sbjct: 192 GILLTEIVTHGRIP 205
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 20/144 (13%)
Query: 550 IVYEYLESGSLDKILNN---DA-------SAKELGWTQRLNVIKGVADALFYLHNNCFPP 599
+V+EY++ G L+K L DA EL +Q L++ + +A + YL + F
Sbjct: 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHF-- 149
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH----GNVAPELAYTMK 655
VH D++++N L+ + DF +++ ++ S+++ ++ G + PE K
Sbjct: 150 -VHRDLATRNCLVGENLLVKIGDFGMSR--DVYSTDYYRVGGHTMLPIRWMPPESIMYRK 206
Query: 656 VTEKCDVYSFGVLALEVIK-GKHP 678
T + DV+S GV+ E+ GK P
Sbjct: 207 FTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 74/174 (42%), Gaps = 7/174 (4%)
Query: 267 ITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSL 326
I NIP + + LDL SN + + L + L+ NKL G L
Sbjct: 31 IPSNIPADT------KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKEL 84
Query: 327 INLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNF 386
NLE L ++ N L + LV L L L N+L P D+L L+ L L +N
Sbjct: 85 KNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNE 144
Query: 387 LGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIP 440
L ++ SL++L L N L + F++L L + + N+L+ +P
Sbjct: 145 LQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVP 197
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 2/130 (1%)
Query: 305 LNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLS 364
L + ++ NKL G L+NL L L N L + SL KL YL+L +N+L
Sbjct: 87 LETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNEL- 145
Query: 365 QQIPIEL-DNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELH 423
Q +P + D L L EL L +N L ++ L+ L L N L + F+ L
Sbjct: 146 QSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLE 205
Query: 424 GLLHIDISYN 433
L + + N
Sbjct: 206 KLKMLQLQEN 215
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 42/108 (38%)
Query: 302 IIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHN 361
++ L + L N+L P SL L YL L N L + L L L L +N
Sbjct: 108 LVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNN 167
Query: 362 KLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYN 409
+L + D L L L L +N L +E L+ L L N
Sbjct: 168 QLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 83/215 (38%), Gaps = 34/215 (15%)
Query: 172 SIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQI-GNLKS 230
+IP + +L+ L SN L ++ T L LYL +N ++P I LK+
Sbjct: 34 NIPADTKKLD------LQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKN 86
Query: 231 LFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNY 290
L + + N+L A+P+ + D +N L L L N
Sbjct: 87 LETLWVTDNKLQ-ALPIGV----------FDQLVN---------------LAELRLDRNQ 120
Query: 291 IVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSL 350
+ P ++ L +SL N+L G L +L+ L L N L + L
Sbjct: 121 LKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKL 180
Query: 351 VKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHN 385
+L L L +N+L + D+L L L L N
Sbjct: 181 TELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 71/176 (40%), Gaps = 14/176 (7%)
Query: 71 SLCTWSG--IHCNHAGRVFGINLTSISLNGTLLEFSFSSFP-HLAYLDLYNNELFDIIPP 127
+LC G CN+ N S+ + L S+ P LDL +N+L +
Sbjct: 3 ALCKKDGGVCSCNN-------NKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSK 55
Query: 128 QISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXXXXRNQLNGSIPHEV-GQLNFLNHL 186
L+KL L NKL +P+ + ++P V QL L L
Sbjct: 56 AFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAEL 114
Query: 187 ILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQI-GNLKSLFDMKLCINQL 241
LD N L PR + T L +L L N S+P+ + L SL +++L NQL
Sbjct: 115 RLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQL 169
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 50/139 (35%), Gaps = 2/139 (1%)
Query: 104 SFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXX 163
+F L L L +N+L + L LE L NKL
Sbjct: 56 AFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELR 115
Query: 164 XXRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSL-SNFTNLVFLYLYNNSFSGSIP 222
RNQL P L L +L L N L S+P+ + T+L L LYNN
Sbjct: 116 LDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPE 174
Query: 223 QQIGNLKSLFDMKLCINQL 241
L L +KL NQL
Sbjct: 175 GAFDKLTELKTLKLDNNQL 193
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 37/206 (17%)
Query: 501 NDFDAKHCIGKGGHGSVY-IARVPSGEIFAVKKFHSPLPDNF-------------CSHPR 546
+DF+ +G G G V+ ++ PSG + A K H + C+ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 547 ------------QSFIVYEYLESGSLDKILNNDASAKE--LGWTQRLNVIKGVADALFYL 592
+ I E+++ GSLD++L E LG + VIKG L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS-IAVIKG----LTYL 120
Query: 593 HNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAY 652
I+H D+ N+L++ E + DF ++ L S + GT ++PE
Sbjct: 121 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQ 176
Query: 653 TMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D++S G+ +E+ G++P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 37/206 (17%)
Query: 501 NDFDAKHCIGKGGHGSVY-IARVPSGEIFAVKKFHSPLPDNF-------------CSHPR 546
+DF+ +G G G V+ ++ PSG + A K H + C+ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 547 ------------QSFIVYEYLESGSLDKILNNDASAKE--LGWTQRLNVIKGVADALFYL 592
+ I E+++ GSLD++L E LG + VIKG L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS-IAVIKG----LTYL 120
Query: 593 HNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAY 652
I+H D+ N+L++ E + DF ++ L S + GT ++PE
Sbjct: 121 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQ 176
Query: 653 TMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D++S G+ +E+ G++P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 103/271 (38%), Gaps = 40/271 (14%)
Query: 501 NDFDAKHCIGKGGHGSVY-IARVPSGEIFAVKKFHSPLPDNF-------------CSHPR 546
+DF+ +G G G V+ ++ PSG + A K H + C+ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 547 ------------QSFIVYEYLESGSLDKILNNDASAKE--LGWTQRLNVIKGVADALFYL 592
+ I E+++ GSLD++L E LG + VIKG L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS-IAVIKG----LTYL 120
Query: 593 HNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAY 652
I+H D+ N+L++ E + DF ++ L S + GT ++PE
Sbjct: 121 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQ 176
Query: 653 TMKVTEKCDVYSFGVLALEVIKGKH---PRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQ 709
+ + D++S G+ +E+ G++ P D P P L
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSG 236
Query: 710 NKFMSIMQVAFSCLDQNPVSRPTMKRFEVQS 740
+ CL +NP R +K+ V +
Sbjct: 237 VFSLEFQDFVNKCLIKNPAERADLKQLMVHA 267
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 87/213 (40%), Gaps = 41/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIA--RVPSGEIFAVK----KFHSPLPDN------------- 540
D+D +G+G G V +A RV + E AVK K P+N
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 541 -----FCSHPRQSFIVY---EYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALF 590
F H R+ I Y EY G L + D E QR ++ GV
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV---- 118
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAP 648
YLH I H DI +N+LLD +SDF +A ++ +K+ GT VAP
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 649 ELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 680
EL + E DV+S G++ ++ G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 84/224 (37%), Gaps = 48/224 (21%)
Query: 498 RATNDFDAKHC-----IGKGGHGSVYIARVP-----SGEIFAVKKFHSPLPDNFCSHPRQ 547
R F+ +H +GKG GSV + R +GE+ AVKK ++ R+
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 548 SFI--------------------------VYEYLESGSLDKILNNDASAKELGWTQRLNV 581
I + EYL GSL L A A+ + + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--AHAERIDHIKLLQY 122
Query: 582 IKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAG 641
+ + YL + +H D++++N+L++ + DF + K L D
Sbjct: 123 TSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 179
Query: 642 THGNV---APELAYTMKVTEKCDVYSFGVLALEVI----KGKHP 678
+ APE K + DV+SFGV+ E+ K K P
Sbjct: 180 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 223
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EY+E+GSL L + K L + L++ +A+ + ++ + +H D+ +
Sbjct: 93 YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAA 148
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ ++DF +A+ + + + ++ G + APE T K DV+SF
Sbjct: 149 NILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 206
Query: 666 GVLALEVI 673
G+L E++
Sbjct: 207 GILLTEIV 214
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 37/206 (17%)
Query: 501 NDFDAKHCIGKGGHGSVY-IARVPSGEIFAVKKFHSPLPDNF-------------CSHP- 545
+DF+ +G G G V+ ++ PSG + A K H + C+ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 546 -----------RQSFIVYEYLESGSLDKILNNDASAKE--LGWTQRLNVIKGVADALFYL 592
+ I E+++ GSLD++L E LG + VIKG L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS-IAVIKG----LTYL 120
Query: 593 HNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAY 652
I+H D+ N+L++ E + DF ++ L S + GT ++PE
Sbjct: 121 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQ 176
Query: 653 TMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D++S G+ +E+ G++P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EY+E+GSL L + K L + L++ +A+ + ++ + +H D+ +
Sbjct: 89 YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAA 144
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ ++DF +A+ + + + ++ G + APE T K DV+SF
Sbjct: 145 NILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 202
Query: 666 GVLALEVIK-GKHP 678
G+L E++ G+ P
Sbjct: 203 GILLTEIVTHGRIP 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EY+E+GSL L + K L + L++ +A+ + ++ + +H D+ +
Sbjct: 83 YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAA 138
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ ++DF +A+ + + + ++ G + APE T K DV+SF
Sbjct: 139 NILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196
Query: 666 GVLALEVIK-GKHP 678
G+L E++ G+ P
Sbjct: 197 GILLTEIVTHGRIP 210
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL +VH D++++NVL+ ++DF +A+ L D ++
Sbjct: 143 LNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 199
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E + K T + DV+S+GV E++ G P D
Sbjct: 200 DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD----GIPTREIPDLL 255
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M V C + SRP K + + +P
Sbjct: 256 EKGERLPQPPICTIDVYM----VMVKCWMIDADSRPKFKELAAEFSRMARDPQR 305
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EY+E+GSL L + K L + L++ +A+ + ++ + +H D+ +
Sbjct: 88 YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAA 143
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ ++DF +A+ + + + ++ G + APE T K DV+SF
Sbjct: 144 NILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 201
Query: 666 GVLALEVIK-GKHP 678
G+L E++ G+ P
Sbjct: 202 GILLTEIVTHGRIP 215
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 37/206 (17%)
Query: 501 NDFDAKHCIGKGGHGSVY-IARVPSGEIFAVKKFH---SPLPDNF----------CSHP- 545
+DF+ +G G G V+ ++ PSG + A K H P N C+ P
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 546 -----------RQSFIVYEYLESGSLDKILNNDASAKE--LGWTQRLNVIKGVADALFYL 592
+ I E+++ GSLD++L E LG + VIKG L YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS-IAVIKG----LTYL 147
Query: 593 HNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAY 652
I+H D+ N+L++ E + DF ++ L S + GT ++PE
Sbjct: 148 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQ 203
Query: 653 TMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D++S G+ +E+ G++P
Sbjct: 204 GTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+IV +Y E G L K +N Q L+ + AL ++H+ I+H DI S+
Sbjct: 99 YIVMDYCEGGDLFKRINAQKGVL-FQEDQILDWFVQICLALKHVHDR---KILHRDIKSQ 154
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
N+ L + DF IA+ LN GT ++PE+ K D+++ G +
Sbjct: 155 NIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCV 214
Query: 669 ALEVIKGKH 677
E+ KH
Sbjct: 215 LYELCTLKH 223
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Query: 260 LDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRI 319
+D+S N + + +LQ+LDLS I + +L+ + L+GN +
Sbjct: 32 IDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFS 91
Query: 320 PGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKL-SQQIPIELDNLIHLS 378
PG L +LE L L++ +G L+ L LN++HN + S ++P NL +L
Sbjct: 92 PGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLV 151
Query: 379 ELDLSHNFL 387
+DLS+N++
Sbjct: 152 HVDLSYNYI 160
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 84/210 (40%), Gaps = 9/210 (4%)
Query: 180 LNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNN--SFSGSIPQQIGNLKSLFDMKLC 237
L FL L L N GSI +L +L L N SFSG SL + L
Sbjct: 322 LPFLKSLTLTMN--KGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDL- 378
Query: 238 INQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGES-PQLQYLDLSSNYIVGEIP 296
NGAI +S ++ +L LD + + F S +L YLD+S +
Sbjct: 379 --SFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFD 436
Query: 297 TQLGNIIYLNRISLSGNKLS-GRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYY 355
+ LN + ++GN + + NL +LDLS L +L +L
Sbjct: 437 GIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQL 496
Query: 356 LNLSHNKLSQQIPIELDNLIHLSELDLSHN 385
LN+SHN L + L LS LD S N
Sbjct: 497 LNMSHNNLLFLDSSHYNQLYSLSTLDCSFN 526
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 116/303 (38%), Gaps = 59/303 (19%)
Query: 196 SIPRSLSNFTNLVFLYLYNNSFSGSIPQ--QIGNLKSLFDMKLCINQLNGAIPLSIDWG- 252
SI L + T F Y N FS I + + N+ ++ + I L +P W
Sbjct: 248 SIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLED-VPKHFKWQS 306
Query: 253 ----RC----------PQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQ 298
RC P L L +++N G+I F+ P L YLDLS N +
Sbjct: 307 LSIIRCQLKQFPTLDLPFLKSLTLTMNK--GSISFKKVALPSLSYLDLSRNALSFSGCCS 364
Query: 299 LGNIIY--LNRISLSGNKLSGRI--PGELGSLINLEYLDLSANHLSNFV-LESLGSLVKL 353
++ L + LS N G I L L++LD + L + SL KL
Sbjct: 365 YSDLGTNSLRHLDLSFN---GAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKL 421
Query: 354 YYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRI--------------CRME 399
YL++S+ L L+ L ++ N + S + C++E
Sbjct: 422 LYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLE 481
Query: 400 S-----------LEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEG------HIPNS 442
L+ LN+S+NNL L + +L+ L +D S+N++E H P S
Sbjct: 482 QISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKS 541
Query: 443 TTF 445
F
Sbjct: 542 LAF 544
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 1/110 (0%)
Query: 100 LLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXX 159
L +SFS+F L +LDL E+ I L L L N + P
Sbjct: 42 LKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSL 101
Query: 160 XXXXXXRNQLNGSIPHEVGQLNFLNHLILDSNFL-GGSIPRSLSNFTNLV 208
+L +GQL L L + NF+ +P SN TNLV
Sbjct: 102 ENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLV 151
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Query: 260 LDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRI 319
+D+S N + + +LQ+LDLS I + +L+ + L+GN +
Sbjct: 37 IDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFS 96
Query: 320 PGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKL-SQQIPIELDNLIHLS 378
PG L +LE L L++ +G L+ L LN++HN + S ++P NL +L
Sbjct: 97 PGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLV 156
Query: 379 ELDLSHNFL 387
+DLS+N++
Sbjct: 157 HVDLSYNYI 165
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 84/210 (40%), Gaps = 9/210 (4%)
Query: 180 LNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNN--SFSGSIPQQIGNLKSLFDMKLC 237
L FL L L N GSI +L +L L N SFSG SL + L
Sbjct: 327 LPFLKSLTLTMN--KGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDL- 383
Query: 238 INQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGES-PQLQYLDLSSNYIVGEIP 296
NGAI +S ++ +L LD + + F S +L YLD+S +
Sbjct: 384 --SFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFD 441
Query: 297 TQLGNIIYLNRISLSGNKLS-GRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYY 355
+ LN + ++GN + + NL +LDLS L +L +L
Sbjct: 442 GIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQL 501
Query: 356 LNLSHNKLSQQIPIELDNLIHLSELDLSHN 385
LN+SHN L + L LS LD S N
Sbjct: 502 LNMSHNNLLFLDSSHYNQLYSLSTLDCSFN 531
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 116/303 (38%), Gaps = 59/303 (19%)
Query: 196 SIPRSLSNFTNLVFLYLYNNSFSGSIPQ--QIGNLKSLFDMKLCINQLNGAIPLSIDWG- 252
SI L + T F Y N FS I + + N+ ++ + I L +P W
Sbjct: 253 SIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLED-VPKHFKWQS 311
Query: 253 ----RC----------PQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQ 298
RC P L L +++N G+I F+ P L YLDLS N +
Sbjct: 312 LSIIRCQLKQFPTLDLPFLKSLTLTMNK--GSISFKKVALPSLSYLDLSRNALSFSGCCS 369
Query: 299 LGNIIY--LNRISLSGNKLSGRI--PGELGSLINLEYLDLSANHLSNFV-LESLGSLVKL 353
++ L + LS N G I L L++LD + L + SL KL
Sbjct: 370 YSDLGTNSLRHLDLSFN---GAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKL 426
Query: 354 YYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRI--------------CRME 399
YL++S+ L L+ L ++ N + S + C++E
Sbjct: 427 LYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLE 486
Query: 400 S-----------LEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEG------HIPNS 442
L+ LN+S+NNL L + +L+ L +D S+N++E H P S
Sbjct: 487 QISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKS 546
Query: 443 TTF 445
F
Sbjct: 547 LAF 549
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 1/110 (0%)
Query: 100 LLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXX 159
L +SFS+F L +LDL E+ I L L L N + P
Sbjct: 47 LKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSL 106
Query: 160 XXXXXXRNQLNGSIPHEVGQLNFLNHLILDSNFL-GGSIPRSLSNFTNLV 208
+L +GQL L L + NF+ +P SN TNLV
Sbjct: 107 ENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLV 156
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 37/206 (17%)
Query: 501 NDFDAKHCIGKGGHGSVY-IARVPSGEIFAVKKFHSPLPDNF-------------CSHP- 545
+DF+ +G G G V+ ++ PSG + A K H + C+ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 546 -----------RQSFIVYEYLESGSLDKILNNDASAKE--LGWTQRLNVIKGVADALFYL 592
+ I E+++ GSLD++L E LG + VIKG L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS-IAVIKG----LTYL 120
Query: 593 HNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAY 652
I+H D+ N+L++ E + DF ++ L S + GT ++PE
Sbjct: 121 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQ 176
Query: 653 TMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D++S G+ +E+ G++P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 32/228 (14%)
Query: 468 SCMSYRKASRKIWIVIVFP-LLGKIVYEEII----RATNDFDAKHCIGK----GGHGSVY 518
S S++K + I + F LG + E++ +AT A CI K G S+
Sbjct: 9 SSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSI- 67
Query: 519 IARVPSGEIFAVKKFHS----PLPDNFCSHPRQSFIVYEYLESGSL-DKILNNDASAKEL 573
EI ++K L D + S P ++V + + G L D+I+ ++
Sbjct: 68 -----ENEIAVLRKIKHENIVALEDIYES-PNHLYLVMQLVSGGELFDRIVEKGFYTEKD 121
Query: 574 GWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLL---DLGYEAHVSDFRIAKFLN 630
T +I+ V DA++YLH IVH D+ +N+L D + +SDF ++K +
Sbjct: 122 AST----LIRQVLDAVYYLHRM---GIVHRDLKPENLLYYSQDEESKIMISDFGLSK-ME 173
Query: 631 LDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
S GT G VAPE+ ++ D +S GV+A ++ G P
Sbjct: 174 GKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Query: 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNV 610
VY LE +L K + + ++ + YLHNN ++H D+ N+
Sbjct: 101 VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNL 157
Query: 611 LLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLAL 670
L+ + + DF +A + D L GT +APE+ + + D++S G +
Sbjct: 158 FLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILY 217
Query: 671 EVIKGKHP 678
++ GK P
Sbjct: 218 TLLVGKPP 225
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 81/202 (40%), Gaps = 19/202 (9%)
Query: 486 PLLGKIVYEEIIRATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPDNFCSHP 545
P LG+ + E+ R + C K V+ RV E+ A SP
Sbjct: 78 PRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--RVE--ELVACAGLSSPRIVPLYGAV 133
Query: 546 RQSF---IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVH 602
R+ I E LE GSL +++ E + L + + L YLH I+H
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHTR---RILH 187
Query: 603 WDISSKNVLLDL-GYEAHVSDFRIAKFLNLDSSNWSKLAG-----THGNVAPELAYTMKV 656
D+ + NVLL G A + DF A L D S L G T ++APE+
Sbjct: 188 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 247
Query: 657 TEKCDVYSFGVLALEVIKGKHP 678
K D++S + L ++ G HP
Sbjct: 248 DAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 37/206 (17%)
Query: 501 NDFDAKHCIGKGGHGSVY-IARVPSGEIFAVKKFH---SPLPDN----------FCSHP- 545
+DF+ +G G G V+ ++ PSG + A K H P N C+ P
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 546 -----------RQSFIVYEYLESGSLDKILNNDASAKE--LGWTQRLNVIKGVADALFYL 592
+ I E+++ GSLD++L E LG + VIKG L YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS-IAVIKG----LTYL 182
Query: 593 HNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAY 652
I+H D+ N+L++ E + DF ++ L S + GT ++PE
Sbjct: 183 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQ 238
Query: 653 TMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D++S G+ +E+ G++P
Sbjct: 239 GTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 14/172 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL +VH D++++NVL+ ++DF +A+ L D ++
Sbjct: 120 LNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 176
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E + K T + DV+S+GV E++ G P D
Sbjct: 177 DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD----GIPTREIPDLL 232
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNP 747
RLP P + + +M V C + SRP K + + +P
Sbjct: 233 EKGERLPQPPICTIDVYM----VMVKCWMIDADSRPKFKELAAEFSRMARDP 280
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 13/134 (9%)
Query: 549 FIVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
++V E+ E G L ++I+N + N++K + + YLH + IVH DI
Sbjct: 122 YLVTEFYEGGELFEQIINR----HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKP 174
Query: 608 KNVLLDLG---YEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYS 664
+N+LL+ + DF ++ F + D +L GT +APE+ K EKCDV+S
Sbjct: 175 ENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL-GTAYYIAPEVL-KKKYNEKCDVWS 232
Query: 665 FGVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 233 CGVIMYILLCGYPP 246
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 46/219 (21%)
Query: 542 CSHPRQSFIVYEY----------------LESGSLDKILNNDASAKELGWTQRLNVIKGV 585
C+H ++ EY LE+ I N+ AS ++L L+ V
Sbjct: 119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDL-----LHFSSQV 173
Query: 586 ADALFYLHN-NCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHG 644
A + +L + NC +H D++++NVLL G+ A + DF +A+ + DS+ K G
Sbjct: 174 AQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK-----G 224
Query: 645 N-------VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXX 696
N +APE + T + DV+S+G+L E+ G +P
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP---YPGILVNSKFYKLVK 281
Query: 697 XDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKR 735
++ P+ +N + SIMQ +C P RPT ++
Sbjct: 282 DGYQMAQPAFAPKNIY-SIMQ---ACWALEPTHRPTFQQ 316
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Query: 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNV 610
VY LE +L K + + ++ + YLHNN ++H D+ N+
Sbjct: 117 VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNL 173
Query: 611 LLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLAL 670
L+ + + DF +A + D L GT +APE+ + + D++S G +
Sbjct: 174 FLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILY 233
Query: 671 EVIKGKHP 678
++ GK P
Sbjct: 234 TLLVGKPP 241
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Query: 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNV 610
VY LE +L K + + ++ + YLHNN ++H D+ N+
Sbjct: 117 VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNL 173
Query: 611 LLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLAL 670
L+ + + DF +A + D L GT +APE+ + + D++S G +
Sbjct: 174 FLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILY 233
Query: 671 EVIKGKHP 678
++ GK P
Sbjct: 234 TLLVGKPP 241
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 17/138 (12%)
Query: 549 FIVYEYLESGSLDKILNNDA---SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605
+V Y++ G L + N+ + K+L + VA + YL + F VH D+
Sbjct: 126 LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLASKKF---VHRDL 177
Query: 606 SSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMKVTEKC 660
+++N +LD + V+DF +A+ + D +S T +A E T K T K
Sbjct: 178 AARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKS 236
Query: 661 DVYSFGVLALEVIKGKHP 678
DV+SFGVL E++ P
Sbjct: 237 DVWSFGVLLWELMTRGAP 254
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 17/138 (12%)
Query: 549 FIVYEYLESGSLDKILNNDA---SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605
+V Y++ G L + N+ + K+L + VA + YL + F VH D+
Sbjct: 127 LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLASKKF---VHRDL 178
Query: 606 SSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMKVTEKC 660
+++N +LD + V+DF +A+ + D +S T +A E T K T K
Sbjct: 179 AARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKS 237
Query: 661 DVYSFGVLALEVIKGKHP 678
DV+SFGVL E++ P
Sbjct: 238 DVWSFGVLLWELMTRGAP 255
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 6/130 (4%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
F+V E SL L K L + ++ + YLH N ++H D+
Sbjct: 93 FVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLG 146
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
N+ L+ E + DF +A + D L GT +APE+ + + DV+S G +
Sbjct: 147 NLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCI 206
Query: 669 ALEVIKGKHP 678
++ GK P
Sbjct: 207 MYTLLVGKPP 216
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 6/130 (4%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
F+V E SL L K L + ++ + YLH N ++H D+
Sbjct: 93 FVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLG 146
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
N+ L+ E + DF +A + D L GT +APE+ + + DV+S G +
Sbjct: 147 NLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCI 206
Query: 669 ALEVIKGKHP 678
++ GK P
Sbjct: 207 MYTLLVGKPP 216
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Query: 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNV 610
VY LE +L K + + ++ + YLHNN ++H D+ N+
Sbjct: 117 VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNL 173
Query: 611 LLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLAL 670
L+ + + DF +A + D L GT +APE+ + + D++S G +
Sbjct: 174 FLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILY 233
Query: 671 EVIKGKHP 678
++ GK P
Sbjct: 234 TLLVGKPP 241
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
I E LE GSL +++ E + L + + L YLH+ I+H D+ + N
Sbjct: 143 IFMELLEGGSLGQLVKEQGCLPE---DRALYYLGQALEGLEYLHSR---RILHGDVKADN 196
Query: 610 VLLDL-GYEAHVSDFRIAKFLNLDSSNWSKLAG-----THGNVAPELAYTMKVTEKCDVY 663
VLL G A + DF A L D L G T ++APE+ K DV+
Sbjct: 197 VLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVW 256
Query: 664 SFGVLALEVIKGKHP 678
S + L ++ G HP
Sbjct: 257 SSCCMMLHMLNGCHP 271
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 17/138 (12%)
Query: 549 FIVYEYLESGSLDKILNNDA---SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605
+V Y++ G L + N+ + K+L + VA + YL + F VH D+
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLASKKF---VHRDL 159
Query: 606 SSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMKVTEKC 660
+++N +LD + V+DF +A+ + D +S T +A E T K T K
Sbjct: 160 AARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKS 218
Query: 661 DVYSFGVLALEVIKGKHP 678
DV+SFGVL E++ P
Sbjct: 219 DVWSFGVLLWELMTRGAP 236
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 6/130 (4%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
F+V E SL L K L + ++ + YLH N ++H D+
Sbjct: 97 FVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLG 150
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
N+ L+ E + DF +A + D L GT +APE+ + + DV+S G +
Sbjct: 151 NLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCI 210
Query: 669 ALEVIKGKHP 678
++ GK P
Sbjct: 211 MYTLLVGKPP 220
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
I E LE GSL +++ E + L + + L YLH I+H D+ + N
Sbjct: 127 IFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHTR---RILHGDVKADN 180
Query: 610 VLLDL-GYEAHVSDFRIAKFLNLDSSNWSKLAG-----THGNVAPELAYTMKVTEKCDVY 663
VLL G A + DF A L D S L G T ++APE+ K D++
Sbjct: 181 VLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIW 240
Query: 664 SFGVLALEVIKGKHP 678
S + L ++ G HP
Sbjct: 241 SSCCMMLHMLNGCHP 255
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 17/138 (12%)
Query: 549 FIVYEYLESGSLDKILNNDA---SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605
+V Y++ G L + N+ + K+L + VA + YL + F VH D+
Sbjct: 100 LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLASKKF---VHRDL 151
Query: 606 SSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMKVTEKC 660
+++N +LD + V+DF +A+ + D +S T +A E T K T K
Sbjct: 152 AARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKS 210
Query: 661 DVYSFGVLALEVIKGKHP 678
DV+SFGVL E++ P
Sbjct: 211 DVWSFGVLLWELMTRGAP 228
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 17/138 (12%)
Query: 549 FIVYEYLESGSLDKILNNDA---SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605
+V Y++ G L + N+ + K+L + VA + YL + F VH D+
Sbjct: 105 LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLASKKF---VHRDL 156
Query: 606 SSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMKVTEKC 660
+++N +LD + V+DF +A+ + D +S T +A E T K T K
Sbjct: 157 AARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKS 215
Query: 661 DVYSFGVLALEVIKGKHP 678
DV+SFGVL E++ P
Sbjct: 216 DVWSFGVLLWELMTRGAP 233
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 17/138 (12%)
Query: 549 FIVYEYLESGSLDKILNNDA---SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605
+V Y++ G L + N+ + K+L + VA + YL + F VH D+
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLASKKF---VHRDL 159
Query: 606 SSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMKVTEKC 660
+++N +LD + V+DF +A+ + D +S T +A E T K T K
Sbjct: 160 AARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKS 218
Query: 661 DVYSFGVLALEVIKGKHP 678
DV+SFGVL E++ P
Sbjct: 219 DVWSFGVLLWELMTRGAP 236
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 17/138 (12%)
Query: 549 FIVYEYLESGSLDKILNNDA---SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605
+V Y++ G L + N+ + K+L + VA + YL + F VH D+
Sbjct: 106 LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLASKKF---VHRDL 157
Query: 606 SSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMKVTEKC 660
+++N +LD + V+DF +A+ + D +S T +A E T K T K
Sbjct: 158 AARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKS 216
Query: 661 DVYSFGVLALEVIKGKHP 678
DV+SFGVL E++ P
Sbjct: 217 DVWSFGVLLWELMTRGAP 234
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 17/138 (12%)
Query: 549 FIVYEYLESGSLDKILNNDA---SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605
+V Y++ G L + N+ + K+L + VA + YL + F VH D+
Sbjct: 107 LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLASKKF---VHRDL 158
Query: 606 SSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMKVTEKC 660
+++N +LD + V+DF +A+ + D +S T +A E T K T K
Sbjct: 159 AARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKS 217
Query: 661 DVYSFGVLALEVIKGKHP 678
DV+SFGVL E++ P
Sbjct: 218 DVWSFGVLLWELMTRGAP 235
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
I E LE GSL +++ E + L + + L YLH I+H D+ + N
Sbjct: 143 IFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHTR---RILHGDVKADN 196
Query: 610 VLLDL-GYEAHVSDFRIAKFLNLDSSNWSKLAG-----THGNVAPELAYTMKVTEKCDVY 663
VLL G A + DF A L D S L G T ++APE+ K D++
Sbjct: 197 VLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIW 256
Query: 664 SFGVLALEVIKGKHP 678
S + L ++ G HP
Sbjct: 257 SSCCMMLHMLNGCHP 271
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 17/138 (12%)
Query: 549 FIVYEYLESGSLDKILNNDA---SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605
+V Y++ G L + N+ + K+L + VA + YL + F VH D+
Sbjct: 103 LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLASKKF---VHRDL 154
Query: 606 SSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMKVTEKC 660
+++N +LD + V+DF +A+ + D +S T +A E T K T K
Sbjct: 155 AARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKS 213
Query: 661 DVYSFGVLALEVIKGKHP 678
DV+SFGVL E++ P
Sbjct: 214 DVWSFGVLLWELMTRGAP 231
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EY+E+GSL L + K L + L++ +A+ + ++ + +H D+ +
Sbjct: 83 YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAA 138
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTEKCDVYSFG 666
N+L+ ++DF +A+ + D+ ++ APE T K DV+SFG
Sbjct: 139 NILVSDTLSCKIADFGLARLIE-DAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197
Query: 667 VLALEVIK-GKHP 678
+L E++ G+ P
Sbjct: 198 ILLTEIVTHGRIP 210
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 543 SHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVH 602
S P F+V EY+ G L + +E+ + + + + A+ Y H + +VH
Sbjct: 81 STPTDFFMVMEYVSGGELFDYICKHGRVEEM---EARRLFQQILSAVDYCHRHM---VVH 134
Query: 603 WDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE-LAYTMKVTEKCD 661
D+ +NVLLD A ++DF ++ ++ D G+ APE ++ + + D
Sbjct: 135 RDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRTSCGSPNYAAPEVISGRLYAGPEVD 193
Query: 662 VYSFGVLALEVIKGKHPRD 680
++S GV+ ++ G P D
Sbjct: 194 IWSCGVILYALLCGTLPFD 212
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL ++ D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 83/206 (40%), Gaps = 43/206 (20%)
Query: 509 IGKGGHGSV-YIARVPSGEIFAVKKFHSPLP-----------DNFCSHPRQSFIVYEY-- 554
IG+G +GSV + PSG+I AVK+ S + D +IV Y
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 555 ------------LESGSLDKILN------NDASAKELGWTQRLNVIKGVADALFYLHNNC 596
L S S DK +D +E+ L +K AL +L N
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVK----ALNHLKENL 145
Query: 597 FPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL----AY 652
I+H DI N+LLD + DF I+ L +DS ++ AG +APE A
Sbjct: 146 --KIIHRDIKPSNILLDRSGNIKLCDFGISGQL-VDSIAKTRDAGCRPYMAPERIDPSAS 202
Query: 653 TMKVTEKCDVYSFGVLALEVIKGKHP 678
+ DV+S G+ E+ G+ P
Sbjct: 203 RQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EY+E+GSL L + K L + L++ +A+ + ++ + +H D+ +
Sbjct: 92 YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAA 147
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-VAPELAYTMKVTEKCDVYSFGV 667
N+L+ ++DF +A+ + + + A APE T K DV+SFG+
Sbjct: 148 NILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 207
Query: 668 LALEVIK-GKHP 678
L E++ G+ P
Sbjct: 208 LLTEIVTHGRIP 219
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 543 SHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVH 602
S P F+V EY+ G L + +E+ + + + + A+ Y H + +VH
Sbjct: 81 STPTDFFMVMEYVSGGELFDYICKHGRVEEM---EARRLFQQILSAVDYCHRHM---VVH 134
Query: 603 WDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE-LAYTMKVTEKCD 661
D+ +NVLLD A ++DF ++ ++ D G+ APE ++ + + D
Sbjct: 135 RDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRDSCGSPNYAAPEVISGRLYAGPEVD 193
Query: 662 VYSFGVLALEVIKGKHPRD 680
++S GV+ ++ G P D
Sbjct: 194 IWSCGVILYALLCGTLPFD 212
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EY+E+GSL L + K L + L++ +A+ + ++ + +H D+ +
Sbjct: 89 YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAA 144
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-VAPELAYTMKVTEKCDVYSFGV 667
N+L+ ++DF +A+ + + + A APE T K DV+SFG+
Sbjct: 145 NILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 204
Query: 668 LALEVIK-GKHP 678
L E++ G+ P
Sbjct: 205 LLTEIVTHGRIP 216
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 6/130 (4%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
F+V E SL L K L + ++ + YLH N ++H D+
Sbjct: 91 FVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLG 144
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
N+ L+ E + DF +A + D L GT +APE+ + + DV+S G +
Sbjct: 145 NLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCI 204
Query: 669 ALEVIKGKHP 678
++ GK P
Sbjct: 205 MYTLLVGKPP 214
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 71/175 (40%), Gaps = 9/175 (5%)
Query: 269 GNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLIN 328
G G Q YLDL +N + + L ++ L GNKL G L +
Sbjct: 18 GRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTS 77
Query: 329 LEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIEL-DNLIHLSELDLSHNFL 387
L YL+LS N L + L +L L L+ N+L Q +P + D L L +L L N L
Sbjct: 78 LTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQL-QSLPDGVFDKLTQLKDLRLYQNQL 136
Query: 388 GEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPNS 442
R+ SL+ + L N P G+ ++ NK G + NS
Sbjct: 137 KSVPDGVFDRLTSLQYIWLHDNPWDCTCP-------GIRYLSEWINKHSGVVRNS 184
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EY+E+GSL L + K L + L++ +A+ + ++ + +H D+ +
Sbjct: 91 YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAA 146
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-VAPELAYTMKVTEKCDVYSFGV 667
N+L+ ++DF +A+ + + + A APE T K DV+SFG+
Sbjct: 147 NILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 206
Query: 668 LALEVIK-GKHP 678
L E++ G+ P
Sbjct: 207 LLTEIVTHGRIP 218
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 41/202 (20%)
Query: 509 IGKGGHGSVYIARVPSGEIFAVKKFHSPLPDNFCSHPRQS-------------------- 548
IG G G+VY + + K P P+ F + +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 549 ---FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605
IV ++ E SL K L+ + ++ Q +++ + A + YLH I+H D+
Sbjct: 104 DNLAIVTQWCEGSSLYKHLHVQETKFQM--FQLIDIARQTAQGMDYLHAKN---IIHRDM 158
Query: 606 SSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS---KLAGTHGNV---APELAYTMK---V 656
S N+ L G + DF +A S WS ++ G+V APE+
Sbjct: 159 KSNNIFLHEGLTVKIGDFGLATV----KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 657 TEKCDVYSFGVLALEVIKGKHP 678
+ + DVYS+G++ E++ G+ P
Sbjct: 215 SFQSDVYSYGIVLYELMTGELP 236
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EY+E+GSL L + K L + L++ +A+ + ++ + +H D+ +
Sbjct: 85 YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAA 140
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTEKCDVYSFG 666
N+L+ ++DF +A+ + D+ ++ APE T K DV+SFG
Sbjct: 141 NILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 199
Query: 667 VLALEVIK-GKHP 678
+L E++ G+ P
Sbjct: 200 ILLTEIVTHGRIP 212
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EY+E+GSL L + K L + L++ +A+ + ++ + +H ++ +
Sbjct: 79 YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IHRNLRAA 134
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ ++DF +A+ + + + ++ G + APE T K DV+SF
Sbjct: 135 NILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 192
Query: 666 GVLALEVIK-GKHP 678
G+L E++ G+ P
Sbjct: 193 GILLTEIVTHGRIP 206
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 6/130 (4%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
F+V E SL L K L + ++ + YLH N ++H D+
Sbjct: 117 FVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLG 170
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
N+ L+ E + DF +A + D L GT +APE+ + + DV+S G +
Sbjct: 171 NLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCI 230
Query: 669 ALEVIKGKHP 678
++ GK P
Sbjct: 231 MYTLLVGKPP 240
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EY+E+GSL L + K L + L++ +A+ + ++ + +H D+ +
Sbjct: 84 YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAA 139
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTEKCDVYSFG 666
N+L+ ++DF +A+ + D+ ++ APE T K DV+SFG
Sbjct: 140 NILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 198
Query: 667 VLALEVIK-GKHP 678
+L E++ G+ P
Sbjct: 199 ILLTEIVTHGRIP 211
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 6/130 (4%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
F+V E SL L K L + ++ + YLH N ++H D+
Sbjct: 115 FVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLG 168
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
N+ L+ E + DF +A + D L GT +APE+ + + DV+S G +
Sbjct: 169 NLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCI 228
Query: 669 ALEVIKGKHP 678
++ GK P
Sbjct: 229 MYTLLVGKPP 238
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EY+E+GSL L + K L + L++ +A+ + ++ + +H D+ +
Sbjct: 83 YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAA 138
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-VAPELAYTMKVTEKCDVYSFGV 667
N+L+ ++DF +A+ + + + A APE T K DV+SFG+
Sbjct: 139 NILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 668 LALEVIK-GKHP 678
L E++ G+ P
Sbjct: 199 LLTEIVTHGRIP 210
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 82/190 (43%), Gaps = 18/190 (9%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ E++ GSL L +D +K+ + ++ +A+ + ++ + +H D+ +
Sbjct: 85 YIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY---IHRDLRAA 140
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ ++DF +A+ + + + ++ G + APE T K DV+SF
Sbjct: 141 NILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSF 198
Query: 666 GVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLD 724
G+L +E++ G+ P R+P P +N + + C
Sbjct: 199 GILLMEIVTYGRIP----YPGMSNPEVIRALERGYRMPRP----ENCPEELYNIMMRCWK 250
Query: 725 QNPVSRPTMK 734
P RPT +
Sbjct: 251 NRPEERPTFE 260
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 550 IVYEYLESGSLDKILNNDAS-AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
I E+++ GSLD++L +E+ + V++G+A YL I+H D+
Sbjct: 91 ICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLA----YLREKH--QIMHRDVKPS 144
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
N+L++ E + DF ++ L S + GT +APE + + D++S G+
Sbjct: 145 NILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLS 202
Query: 669 ALEVIKGKHP 678
+E+ G++P
Sbjct: 203 LVELAVGRYP 212
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EY+E+GSL L + K L + L++ +A+ + ++ + +H D+ +
Sbjct: 83 YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAA 138
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTEKCDVYSFG 666
N+L+ ++DF +A+ + D+ ++ APE T K DV+SFG
Sbjct: 139 NILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197
Query: 667 VLALEVIK-GKHP 678
+L E++ G+ P
Sbjct: 198 ILLTEIVTHGRIP 210
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ EY+ GSL L +D K L + ++ +A+ + Y+ + +H D+ +
Sbjct: 84 YIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY---IHRDLRAA 139
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
NVL+ ++DF +A+ + + + ++ G + APE T K DV+SF
Sbjct: 140 NVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSF 197
Query: 666 GVLALEVIK-GKHP 678
G+L E++ GK P
Sbjct: 198 GILLYEIVTYGKIP 211
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 487 LLGKIVYEEIIRATNDFDAKH-CIGKGGHGSVYIARVPS--------GEIFAVKKFHSPL 537
+LG+ + ++++A N D+++ I K H ++ + S + V+ + + L
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 538 -------PDNFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALF 590
P FI EY E+ +L +++++ ++ RL + + +AL
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL--FRQILEALS 130
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAK-------FLNLDSS-------NW 636
Y+H+ I+H ++ N+ +D + DF +AK L LDS N
Sbjct: 131 YIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 637 SKLAGTHGNVAPE-LAYTMKVTEKCDVYSFGVLALEVI 673
+ GT VA E L T EK D YS G++ E I
Sbjct: 188 TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 17/138 (12%)
Query: 549 FIVYEYLESGSLDKILNNDA---SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605
+V Y++ G L + N+ + K+L + VA + YL + F VH D+
Sbjct: 107 LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLASKKF---VHRDL 158
Query: 606 SSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMKVTEKC 660
+++N +LD + V+DF +A+ + D S T +A E T K T K
Sbjct: 159 AARNCMLDEKFTVKVADFGLARDM-YDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKS 217
Query: 661 DVYSFGVLALEVIKGKHP 678
DV+SFGVL E++ P
Sbjct: 218 DVWSFGVLLWELMTRGAP 235
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 82/208 (39%), Gaps = 37/208 (17%)
Query: 501 NDFDAKHCIGKGGHGSVYIA-RVPSGEIFAVK---------------------------- 531
DF+ +GKG G V ++ R + E++AVK
Sbjct: 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 79
Query: 532 -KFHSPLPDNFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALF 590
F + L F + R F++ EY+ G L + KE + +A LF
Sbjct: 80 PPFLTQLHSCFQTMDRLYFVM-EYVNGGDLMYHIQQVGRFKE---PHAVFYAAEIAIGLF 135
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
+L + I++ D+ NV+LD ++DF + K D GT +APE+
Sbjct: 136 FLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEI 192
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ D ++FGVL E++ G+ P
Sbjct: 193 IAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 119 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL + D+++ G + +++ G P
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 118 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL + D+++ G + +++ G P
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 82/190 (43%), Gaps = 18/190 (9%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ E++ GSL L +D +K+ + ++ +A+ + ++ + +H D+ +
Sbjct: 258 YIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY---IHRDLRAA 313
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
N+L+ ++DF +A+ + + + ++ G + APE T K DV+SF
Sbjct: 314 NILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSF 371
Query: 666 GVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLD 724
G+L +E++ G+ P R+P P +N + + C
Sbjct: 372 GILLMEIVTYGRIP----YPGMSNPEVIRALERGYRMPRP----ENCPEELYNIMMRCWK 423
Query: 725 QNPVSRPTMK 734
P RPT +
Sbjct: 424 NRPEERPTFE 433
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL + D+++ G + +++ G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 117 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL + D+++ G + +++ G P
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 144 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL + D+++ G + +++ G P
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 116 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL + D+++ G + +++ G P
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 146 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL + D+++ G + +++ G P
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL + D+++ G + +++ G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSA 125
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H D++++N L+ + V+DF +++ + D+ ++ AG +
Sbjct: 126 MEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAKFPIKW 180
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 181 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 235
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 236 PE-GCPEKVYELMR---ACWQWNPSDRPS 260
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL + D+++ G + +++ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 90/226 (39%), Gaps = 51/226 (22%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILNNDASA----------------KELGWTQRL------ 579
C+H ++ EY G L L A A KE G L
Sbjct: 104 CTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHF 163
Query: 580 --NVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS 637
V +G+A F NC +H D++++NVLL G+ A + DF +A+ + DS+
Sbjct: 164 SSQVAQGMA---FLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 216
Query: 638 KLAGTHGN-------VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXX 689
K GN +APE + T + DV+S+G+L E+ G +P
Sbjct: 217 K-----GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP---YPGILVNS 268
Query: 690 XXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKR 735
++ P+ +N + SIMQ +C P RPT ++
Sbjct: 269 KFYKLVKDGYQMAQPAFAPKNIY-SIMQ---ACWALEPTHRPTFQQ 310
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL + D+++ G + +++ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL + D+++ G + +++ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSA 123
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H D++++N L+ + V+DF +++ + D+ ++ AG +
Sbjct: 124 MEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKW 178
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 179 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 233
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 234 PE-GCPEKVYELMR---ACWQWNPSDRPS 258
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL + D+++ G + +++ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 18 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 77
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 78 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSA 136
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H D++++N L+ + V+DF +++ + D+ ++ AG +
Sbjct: 137 MEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKW 191
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 192 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 246
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 247 PE-GCPEKVYELMR---ACWQWNPSDRPS 271
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSA 123
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H D++++N L+ + V+DF +++ + D+ ++ AG +
Sbjct: 124 MEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKW 178
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 179 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 233
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 234 PE-GCPEKVYELMR---ACWQWNPSDRPS 258
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSA 123
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H D++++N L+ + V+DF +++ + D+ ++ AG +
Sbjct: 124 MEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKW 178
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 179 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 233
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 234 PE-GCPEKVYELMR---ACWQWNPSDRPS 258
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSA 128
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H D++++N L+ + V+DF +++ + D+ ++ AG +
Sbjct: 129 MEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKW 183
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 184 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 238
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 239 PE-GCPEKVYELMR---ACWQWNPSDRPS 263
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSA 125
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H D++++N L+ + V+DF +++ + D+ ++ AG +
Sbjct: 126 MEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKW 180
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 181 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 235
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 236 PE-GCPEKVYELMR---ACWQWNPSDRPS 260
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 65
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSA 124
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H D++++N L+ + V+DF +++ + D+ ++ AG +
Sbjct: 125 MEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAKFPIKW 179
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 180 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 234
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 235 PE-GCPEKVYELMR---ACWQWNPSDRPS 259
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 114/293 (38%), Gaps = 37/293 (12%)
Query: 454 QGNKGLCGDIRGFLSCMSYRKASRKIWIVIVFPL----------LGKIVYEEIIRATNDF 503
+GN GLC + + CMS + +K W + + LG + E+ AT +
Sbjct: 150 KGNDGLCQKLS--VPCMSSK--PQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNK 205
Query: 504 DAKHCIGKGGHGSVYI-ARVPSGEIFAVKKFHSPLPDNFCSHPRQSFIVYEYLESGSLDK 562
K + GS+ + A + + + + + +I+ E++ GSL
Sbjct: 206 HTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLD 265
Query: 563 ILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSD 622
L +D +K+ + ++ +A+ + ++ + +H D+ + N+L+ ++D
Sbjct: 266 FLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY---IHRDLRAANILVSASLVCKIAD 321
Query: 623 FRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDX 681
F +A+ W+ APE T K DV+SFG+L +E++ G+ P
Sbjct: 322 FGLARVGAKFPIKWT---------APEAINFGSFTIKSDVWSFGILLMEIVTYGRIP--- 369
Query: 682 XXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMK 734
R+P P +N + + C P RPT +
Sbjct: 370 -YPGMSNPEVIRALERGYRMPRP----ENCPEELYNIMMRCWKNRPEERPTFE 417
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 32/205 (15%)
Query: 503 FDAKHCIGKGGHGSVYIAR----VPSGEIFAVKKF-------------HSPLPDNFCSHP 545
F+ +GKGG+G V+ R +G+IFA+K H+ N
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 546 RQSFIV---YEYLESGSLDKILNNDASAKELGWTQRLNV---------IKGVADALFYLH 593
+ FIV Y + G L IL + + +R + + ++ AL +LH
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
I++ D+ +N++L+ ++DF + K D + GT +APE+
Sbjct: 139 QKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMR 195
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
D +S G L +++ G P
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSA 128
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H D++++N L+ + V+DF +++ + D+ ++ AG +
Sbjct: 129 MEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKW 183
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 184 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 238
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 239 PE-GCPEKVYELMR---ACWQWNPSDRPS 263
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSA 123
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H D++++N L+ + V+DF +++ + D+ ++ AG +
Sbjct: 124 MEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKW 178
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 179 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 233
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 234 PE-GCPEKVYELMR---ACWQWNPSDRPS 258
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 21/140 (15%)
Query: 549 FIVYEYLESGSLDKILNNDA---SAKEL-GWTQRLNVIKGVADALFYLHNNCFPPIVHWD 604
+V Y++ G L + N+ + K+L G+ L V KG+ +L + F VH D
Sbjct: 167 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMK----FLASKKF---VHRD 217
Query: 605 ISSKNVLLDLGYEAHVSDFRIAK------FLNLDSSNWSKLAGTHGNVAPELAYTMKVTE 658
++++N +LD + V+DF +A+ F ++ + +KL +A E T K T
Sbjct: 218 LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW--MALESLQTQKFTT 275
Query: 659 KCDVYSFGVLALEVIKGKHP 678
K DV+SFGVL E++ P
Sbjct: 276 KSDVWSFGVLLWELMTRGAP 295
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 549 FIVYEYLESGSLDKILNNDA---SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605
+V Y++ G L + N+ + K+L + VA + +L + F VH D+
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFLASKKF---VHRDL 159
Query: 606 SSKNVLLDLGYEAHVSDFRIAK------FLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++N +LD + V+DF +A+ F ++ + +KL +A E T K T K
Sbjct: 160 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW--MALESLQTQKFTTK 217
Query: 660 CDVYSFGVLALEVIKGKHP 678
DV+SFGVL E++ P
Sbjct: 218 SDVWSFGVLLWELMTRGAP 236
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSA 123
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H D++++N L+ + V+DF +++ + D+ ++ AG +
Sbjct: 124 MEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKW 178
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 179 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 233
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 234 PE-GCPEKVYELMR---ACWQWNPSDRPS 258
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSA 128
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H D++++N L+ + V+DF +++ + D+ ++ AG +
Sbjct: 129 MEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKW 183
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 184 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 238
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 239 PE-GCPEKVYELMR---ACWQWNPSDRPS 263
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 549 FIVYEYLESGSLDKILNNDA---SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605
+V Y++ G L + N+ + K+L + VA + +L + F VH D+
Sbjct: 113 LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFLASKKF---VHRDL 164
Query: 606 SSKNVLLDLGYEAHVSDFRIAK------FLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++N +LD + V+DF +A+ F ++ + +KL +A E T K T K
Sbjct: 165 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW--MALESLQTQKFTTK 222
Query: 660 CDVYSFGVLALEVIKGKHP 678
DV+SFGVL E++ P
Sbjct: 223 SDVWSFGVLLWELMTRGAP 241
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 84/223 (37%), Gaps = 46/223 (20%)
Query: 489 GKIVYEEIIRATNDFDAKHC-----IGKGGHGSVYIARVP-----SGEIFAVKKFHSPLP 538
G + +E+ R F+ +H +GKG GSV + R +GE+ AVKK
Sbjct: 1 GAMAFED--RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE 58
Query: 539 DNFCSHPRQSFI--------------------------VYEYLESGSLDKILNNDASAKE 572
++ R+ I + EYL GSL L +
Sbjct: 59 EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKER 116
Query: 573 LGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLD 632
+ + L + + YL + +H D++++N+L++ + DF + K L D
Sbjct: 117 IDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQD 173
Query: 633 SSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSFGVLALEV 672
+ APE K + DV+SFGV+ E+
Sbjct: 174 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 216
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSA 128
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H D++++N L+ + V+DF +++ + D+ ++ AG +
Sbjct: 129 MEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKW 183
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 184 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 238
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 239 PE-GCPEKVYELMR---ACWQWNPSDRPS 263
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 549 FIVYEYLESGSLDKILNNDA---SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605
+V Y++ G L + N+ + K+L + VA + +L + F VH D+
Sbjct: 109 LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFLASKKF---VHRDL 160
Query: 606 SSKNVLLDLGYEAHVSDFRIAK------FLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++N +LD + V+DF +A+ F ++ + +KL +A E T K T K
Sbjct: 161 AARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKW--MALESLQTQKFTTK 218
Query: 660 CDVYSFGVLALEVIKGKHP 678
DV+SFGVL E++ P
Sbjct: 219 SDVWSFGVLLWELMTRGAP 237
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSA 123
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H D++++N L+ + V+DF +++ + D+ ++ AG +
Sbjct: 124 MEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKW 178
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 179 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 233
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 234 PE-GCPEKVYELMR---ACWQWNPSDRPS 258
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 68
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 69 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSA 127
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H D++++N L+ + V+DF +++ + D+ ++ AG +
Sbjct: 128 MEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKW 182
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 183 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 237
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 238 PE-GCPEKVYELMR---ACWQWNPSDRPS 262
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSA 125
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H D++++N L+ + V+DF +++ + D+ ++ AG +
Sbjct: 126 MEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKW 180
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 181 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 235
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 236 PE-GCPEKVYELMR---ACWQWNPSDRPS 260
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL + D+++ G + +++ G P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 32/205 (15%)
Query: 503 FDAKHCIGKGGHGSVYIAR----VPSGEIFAVKKF-------------HSPLPDNFCSHP 545
F+ +GKGG+G V+ R +G+IFA+K H+ N
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 546 RQSFIV---YEYLESGSLDKILNNDASAKELGWTQRLNV---------IKGVADALFYLH 593
+ FIV Y + G L IL + + +R + + ++ AL +LH
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
I++ D+ +N++L+ ++DF + K D + GT +APE+
Sbjct: 139 QKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMR 195
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
D +S G L +++ G P
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 284 LDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFV 343
LDLS N + I + +L R+ L+GN L+ +P E+ +L NL LDLS N L++
Sbjct: 229 LDLS-NLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLP 286
Query: 344 LESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKI 391
E LGS +L Y N ++ +P E NL +L L + N L ++
Sbjct: 287 AE-LGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQF 332
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 257 LSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLS 316
L+ L ++ N++T +P EI L+ LDLS N + +P +LG+ L N ++
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDNMVT 306
Query: 317 GRIPGELGSLINLEYLDLSANHLSNFVLESL 347
+P E G+L NL++L + N L L+ L
Sbjct: 307 T-LPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 16/113 (14%)
Query: 326 LINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHN 385
L NL+ ++SAN + L +LY L+ N L++ +P E+ NL +L LDLSHN
Sbjct: 231 LSNLQIFNISAN------IFKYDFLTRLY---LNGNSLTE-LPAEIKNLSNLRVLDLSHN 280
Query: 386 FLGEKISSRICRMESLEKLNLSY--NNLSGLIPRCFEELHGLLHIDISYNKLE 436
+++S + S +L Y +N+ +P F L L + + N LE
Sbjct: 281 ----RLTSLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLE 329
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 549 FIVYEYLESGSLDKILNNDA---SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605
+V Y++ G L + N+ + K+L + VA + +L + F VH D+
Sbjct: 106 LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFLASKKF---VHRDL 157
Query: 606 SSKNVLLDLGYEAHVSDFRIAK------FLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++N +LD + V+DF +A+ F ++ + +KL +A E T K T K
Sbjct: 158 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW--MALESLQTQKFTTK 215
Query: 660 CDVYSFGVLALEVIKGKHP 678
DV+SFGVL E++ P
Sbjct: 216 SDVWSFGVLLWELMTRGAP 234
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 123 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL + D+++ G + +++ G P
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 80/215 (37%), Gaps = 44/215 (20%)
Query: 497 IRATNDFDAKHC-----IGKGGHGSVYIARVP-----SGEIFAVKKFHSPLPDNFCSHPR 546
+R F+ +H +GKG GSV + R +GE+ AVKK ++ R
Sbjct: 1 MRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 60
Query: 547 QSFI--------------------------VYEYLESGSLDKILNNDASAKELGWTQRLN 580
+ I + EYL GSL L + + + L
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQ 118
Query: 581 VIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLA 640
+ + YL + +H D++++N+L++ + DF + K L D
Sbjct: 119 YTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 175
Query: 641 GTHGNV---APELAYTMKVTEKCDVYSFGVLALEV 672
+ APE K + DV+SFGV+ E+
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 6/130 (4%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+ V EY+ G L + KE + +A LF+L + I++ D+
Sbjct: 418 YFVMEYVNGGDLMYHIQQVGRFKE---PHAVFYAAEIAIGLFFLQSKG---IIYRDLKLD 471
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
NV+LD ++DF + K D GT +APE+ + D ++FGVL
Sbjct: 472 NVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 531
Query: 669 ALEVIKGKHP 678
E++ G+ P
Sbjct: 532 LYEMLAGQAP 541
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 549 FIVYEYLESGSLDKILNNDA---SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605
+V Y++ G L + N+ + K+L + VA + +L + F VH D+
Sbjct: 109 LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFLASKKF---VHRDL 160
Query: 606 SSKNVLLDLGYEAHVSDFRIAK------FLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++N +LD + V+DF +A+ F ++ + +KL +A E T K T K
Sbjct: 161 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW--MALESLQTQKFTTK 218
Query: 660 CDVYSFGVLALEVIKGKHP 678
DV+SFGVL E++ P
Sbjct: 219 SDVWSFGVLLWELMTRGAP 237
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGT 642
+ AL YLH I+H D+ +N+LL+ ++DF AK L+ +S + + GT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 643 HGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
V+PEL + D+++ G + +++ G P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 36/214 (16%)
Query: 542 CSHPRQSFIVYEYLESGSL-------DKILNNDAS----AKELGWTQRLNVIKGVADALF 590
C+H ++ EY G L ++L D + L L+ VA +
Sbjct: 119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMA 178
Query: 591 YLHN-NCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN---- 645
+L + NC +H D++++NVLL G+ A + DF +A+ + DS+ K GN
Sbjct: 179 FLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK-----GNARLP 229
Query: 646 ---VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRL 701
+APE + T + DV+S+G+L E+ G +P ++
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP---YPGILVNSKFYKLVKDGYQM 286
Query: 702 PYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKR 735
P+ +N + SIMQ +C P RPT ++
Sbjct: 287 AQPAFAPKNIY-SIMQ---ACWALEPTHRPTFQQ 316
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 79/199 (39%), Gaps = 39/199 (19%)
Query: 509 IGKGGHGSVYIARVP-----SGEIFAVKKFHSPLPDNFCSHPRQ---------SFIV--- 551
+GKG GSV + R +G + AVK+ PD R+ FIV
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 552 --------------YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF 597
EYL SG L L + L ++ L + + YL +
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSR-- 134
Query: 598 PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTM 654
VH D++++N+L++ ++DF +AK L LD + + APE
Sbjct: 135 -RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 193
Query: 655 KVTEKCDVYSFGVLALEVI 673
+ + DV+SFGV+ E+
Sbjct: 194 IFSRQSDVWSFGVVLYELF 212
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 549 FIVYEYLESGSLDKILNNDA---SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605
+V Y++ G L + N+ + K+L + VA + +L + F VH D+
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFLASKKF---VHRDL 159
Query: 606 SSKNVLLDLGYEAHVSDFRIAK------FLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++N +LD + V+DF +A+ F ++ + +KL +A E T K T K
Sbjct: 160 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW--MALESLQTQKFTTK 217
Query: 660 CDVYSFGVLALEVIKGKHP 678
DV+SFGVL E++ P
Sbjct: 218 SDVWSFGVLLWELMTRGAP 236
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 547 QSFIVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605
Q ++V E+ +GS+ D I N + + W + + + L +LH + ++H DI
Sbjct: 101 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AYICREILRGLSHLHQH---KVIHRDI 155
Query: 606 SSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTE-----KC 660
+NVLL E + DF ++ L+ + GT +APE+ + + K
Sbjct: 156 KGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKS 215
Query: 661 DVYSFGVLALEVIKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQ---NKFMSIMQ 717
D++S G+ A+E+ +G P R P P L + KF S ++
Sbjct: 216 DLWSLGITAIEMAEGAPP-------LCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIE 268
Query: 718 VAFSCLDQNPVSRPTMKRF 736
SCL +N RP ++
Sbjct: 269 ---SCLVKNHSQRPATEQL 284
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 79/199 (39%), Gaps = 39/199 (19%)
Query: 509 IGKGGHGSVYIARVP-----SGEIFAVKKFHSPLPDNFCSHPRQ---------SFIV--- 551
+GKG GSV + R +G + AVK+ PD R+ FIV
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 552 --------------YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF 597
EYL SG L L + L ++ L + + YL +
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSR-- 146
Query: 598 PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTM 654
VH D++++N+L++ ++DF +AK L LD + + APE
Sbjct: 147 -RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 205
Query: 655 KVTEKCDVYSFGVLALEVI 673
+ + DV+SFGV+ E+
Sbjct: 206 IFSRQSDVWSFGVVLYELF 224
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 79/199 (39%), Gaps = 39/199 (19%)
Query: 509 IGKGGHGSVYIARVP-----SGEIFAVKKFHSPLPDNFCSHPRQ---------SFIV--- 551
+GKG GSV + R +G + AVK+ PD R+ FIV
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 552 --------------YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF 597
EYL SG L L + L ++ L + + YL +
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSR-- 133
Query: 598 PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTM 654
VH D++++N+L++ ++DF +AK L LD + + APE
Sbjct: 134 -RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 192
Query: 655 KVTEKCDVYSFGVLALEVI 673
+ + DV+SFGV+ E+
Sbjct: 193 IFSRQSDVWSFGVVLYELF 211
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 108/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 65
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSA 124
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H D++++N L+ + V+DF +++ + D+ + AG +
Sbjct: 125 MEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKW 179
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 180 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 234
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 235 PE-GCPEKVYELMR---ACWQWNPSDRPS 259
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Query: 280 QLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSG-NKLSGRIPGELGSLINLEYLDLSANH 338
+L+ L L +N I I L R+ L +LS G L NL YL+L+ +
Sbjct: 137 KLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCN 196
Query: 339 LSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRM 398
L + +L L+KL L+LS N LS P L+HL +L + + + + +
Sbjct: 197 LRE--IPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNL 254
Query: 399 ESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYN 433
+SL ++NL++NNL+ L F LH L I + +N
Sbjct: 255 QSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 289
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 265 NNITGNIP-FEIGESPQLQYLDLSS----NYIVGEIPTQLGNIIYLNRISLSGNKLSGRI 319
NN +IP + P L+ LDL +YI L N+ YLN + ++
Sbjct: 145 NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLT 204
Query: 320 PGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSE 379
P LI L+ LDLS NHLS S L+ L L + +++ DNL L E
Sbjct: 205 P-----LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVE 259
Query: 380 LDLSHNFLGEKISSRICRMESLEKLNLSYN 409
++L+HN L + LE+++L +N
Sbjct: 260 INLAHNNLTLLPHDLFTPLHHLERIHLHHN 289
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 16/122 (13%)
Query: 318 RIPG----ELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDN 373
RIP +LG L L Y+ A L L YLNL+ L ++IP L
Sbjct: 158 RIPSLRRLDLGELKRLSYISEGA----------FEGLSNLRYLNLAMCNL-REIP-NLTP 205
Query: 374 LIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYN 433
LI L ELDLS N L + L+KL + + + + F+ L L+ I++++N
Sbjct: 206 LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHN 265
Query: 434 KL 435
L
Sbjct: 266 NL 267
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 108/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSA 128
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H D++++N L+ + V+DF +++ + D+ + AG +
Sbjct: 129 MEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKW 183
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 184 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 238
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 239 PE-GCPEKVYELMR---ACWQWNPSDRPS 263
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E+L SGSL + L + + ++ Q+L + + YL + + VH D++++N
Sbjct: 102 LIMEFLPSGSLKEYLPKNKN--KINLKQQLKYAVQICKGMDYLGSRQY---VHRDLAARN 156
Query: 610 VLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSFG 666
VL++ ++ + DF + K + D + V APE K DV+SFG
Sbjct: 157 VLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFG 216
Query: 667 VLALEVI 673
V E++
Sbjct: 217 VTLHELL 223
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E+L SGSL + L + + ++ Q+L + + YL + + VH D++++N
Sbjct: 90 LIMEFLPSGSLKEYLPKNKN--KINLKQQLKYAVQICKGMDYLGSRQY---VHRDLAARN 144
Query: 610 VLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSFG 666
VL++ ++ + DF + K + D + V APE K DV+SFG
Sbjct: 145 VLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFG 204
Query: 667 VLALEVI 673
V E++
Sbjct: 205 VTLHELL 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 79/214 (36%), Gaps = 44/214 (20%)
Query: 498 RATNDFDAKHC-----IGKGGHGSVYIARVP-----SGEIFAVKKFHSPLPDNFCSHPRQ 547
R F+ +H +GKG GSV + R +GE+ AVKK ++ R+
Sbjct: 6 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 65
Query: 548 SFI--------------------------VYEYLESGSLDKILNNDASAKELGWTQRLNV 581
I + EYL GSL L + + + L
Sbjct: 66 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQY 123
Query: 582 IKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAG 641
+ + YL + +H D++++N+L++ + DF + K L D
Sbjct: 124 TSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 180
Query: 642 THGNV---APELAYTMKVTEKCDVYSFGVLALEV 672
+ APE K + DV+SFGV+ E+
Sbjct: 181 GESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 214
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 79/214 (36%), Gaps = 44/214 (20%)
Query: 498 RATNDFDAKHC-----IGKGGHGSVYIARVP-----SGEIFAVKKFHSPLPDNFCSHPRQ 547
R F+ +H +GKG GSV + R +GE+ AVKK ++ R+
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 60
Query: 548 SFI--------------------------VYEYLESGSLDKILNNDASAKELGWTQRLNV 581
I + EYL GSL L + + + L
Sbjct: 61 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQY 118
Query: 582 IKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAG 641
+ + YL + +H D++++N+L++ + DF + K L D
Sbjct: 119 TSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 175
Query: 642 THGNV---APELAYTMKVTEKCDVYSFGVLALEV 672
+ APE K + DV+SFGV+ E+
Sbjct: 176 GESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 209
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 105/261 (40%), Gaps = 44/261 (16%)
Query: 501 NDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-----------HSPLP 538
D KH +G G +G VY + + V++F H L
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 539 D--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNC 596
C+ +I+ E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEKKN 129
Query: 597 FPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APE-LAY 652
F +H D++++N L+ + V+DF +++ + D+ + AG + APE LAY
Sbjct: 130 F---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESLAY 184
Query: 653 TMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNK 711
K + K DV++FGVL E+ G P D R+ P K
Sbjct: 185 N-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDPSQVYELLEKDYRMERPE-GCPEK 238
Query: 712 FMSIMQVAFSCLDQNPVSRPT 732
+M+ +C NP RP+
Sbjct: 239 VYELMR---ACWQWNPSDRPS 256
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 81/209 (38%), Gaps = 35/209 (16%)
Query: 501 NDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSPLPDN----------------FCS 543
DFD IG+G + V + R+ + I+A+K L ++ +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 544 HP------------RQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFY 591
HP + F V EY+ G L + + ++L ++ AL Y
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNY 121
Query: 592 LHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELA 651
LH I++ D+ NVLLD ++D+ + K S GT +APE+
Sbjct: 122 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 178
Query: 652 YTMKVTEKCDVYSFGVLALEVIKGKHPRD 680
D ++ GVL E++ G+ P D
Sbjct: 179 RGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDIS 606
Q IV ++ E SL L+ AS + + +++ + A + YLH I+H D+
Sbjct: 93 QLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLK 147
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS------KLAGTHGNVAPELAYTMKVTE-- 658
S N+ L + DF +A + S WS +L+G+ +APE+
Sbjct: 148 SNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 659 -KCDVYSFGVLALEVIKGKHP 678
+ DVY+FG++ E++ G+ P
Sbjct: 204 FQSDVYAFGIVLYELMTGQLP 224
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 82/224 (36%), Gaps = 48/224 (21%)
Query: 498 RATNDFDAKHC-----IGKGGHGSVYIARVP-----SGEIFAVKKFHSPLPDNFCSHPRQ 547
R F+ +H +GKG GSV + R +GE+ AVKK ++ R+
Sbjct: 33 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 92
Query: 548 SFI--------------------------VYEYLESGSLDKILNNDASAKELGWTQRLNV 581
I + EYL GSL L + + + L
Sbjct: 93 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQY 150
Query: 582 IKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAG 641
+ + YL + +H D++++N+L++ + DF + K L D
Sbjct: 151 TSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 207
Query: 642 THGNV---APELAYTMKVTEKCDVYSFGVLALEVI----KGKHP 678
+ APE K + DV+SFGV+ E+ K K P
Sbjct: 208 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 251
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDIS 606
Q IV ++ E SL L+ AS + + +++ + A + YLH I+H D+
Sbjct: 93 QLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLK 147
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS------KLAGTHGNVAPELAYTMKVTE-- 658
S N+ L + DF +A + S WS +L+G+ +APE+
Sbjct: 148 SNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 659 -KCDVYSFGVLALEVIKGKHP 678
+ DVY+FG++ E++ G+ P
Sbjct: 204 FQSDVYAFGIVLYELMTGQLP 224
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 82/224 (36%), Gaps = 48/224 (21%)
Query: 498 RATNDFDAKHC-----IGKGGHGSVYIARVP-----SGEIFAVKKFHSPLPDNFCSHPRQ 547
R F+ +H +GKG GSV + R +GE+ AVKK ++ R+
Sbjct: 9 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 68
Query: 548 SFI--------------------------VYEYLESGSLDKILNNDASAKELGWTQRLNV 581
I + EYL GSL L + + + L
Sbjct: 69 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQY 126
Query: 582 IKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAG 641
+ + YL + +H D++++N+L++ + DF + K L D
Sbjct: 127 TSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 183
Query: 642 THGNV---APELAYTMKVTEKCDVYSFGVLALEVI----KGKHP 678
+ APE K + DV+SFGV+ E+ K K P
Sbjct: 184 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 227
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 35/200 (17%)
Query: 501 NDFDAKHCIGKGGHGSVYIA-----------RVPSGEIFAVKKF-----------HSPLP 538
D KH +G G +G VY+ + + V++F H L
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 91
Query: 539 D--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNC 596
C+ +IV EY+ G+L L + + +E+ L + ++ A+ YL
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYGNLLDYLR-ECNREEVTAVVLLYMATQISSAMEYLEKKN 150
Query: 597 FPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APE-LAY 652
F +H D++++N L+ + V+DF +++ + D+ ++ AG + APE LAY
Sbjct: 151 F---IHRDLAARNCLVGENHVVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAY 205
Query: 653 TMKVTEKCDVYSFGVLALEV 672
+ K DV++FGVL E+
Sbjct: 206 N-TFSIKSDVWAFGVLLWEI 224
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 78/199 (39%), Gaps = 39/199 (19%)
Query: 509 IGKGGHGSVYIARVP-----SGEIFAVKKFHSPLPDNFCSHPRQ---------SFIV--- 551
+GKG GSV + R +G + AVK+ PD R+ FIV
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 552 --------------YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF 597
EYL SG L L + L ++ L + + YL +
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSR-- 130
Query: 598 PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTM 654
VH D++++N+L++ ++DF +AK L LD + APE
Sbjct: 131 -RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDN 189
Query: 655 KVTEKCDVYSFGVLALEVI 673
+ + DV+SFGV+ E+
Sbjct: 190 IFSRQSDVWSFGVVLYELF 208
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 33/209 (15%)
Query: 487 LLGKIVYEEIIRA----TNDFDAKHCIGK----GGHGSVYIARVPSGEIFAVKKFHSP-- 536
+LG + E+I A T A CI K G GS+ EI + K P
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM------ENEIAVLHKIKHPNI 78
Query: 537 -LPDNFCSHPRQSFIVYEYLESGSL-DKILNNDASAKELGWTQR--LNVIKGVADALFYL 592
D+ +++ + + G L D+I+ +T+R +I V DA+ YL
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF------YTERDASRLIFQVLDAVKYL 132
Query: 593 HNNCFPPIVHWDISSKNVL---LDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE 649
H+ IVH D+ +N+L LD + +SDF ++K + S S GT G VAPE
Sbjct: 133 HDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-PGSVLSTACGTPGYVAPE 188
Query: 650 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ ++ D +S GV+A ++ G P
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 79/214 (36%), Gaps = 44/214 (20%)
Query: 498 RATNDFDAKHC-----IGKGGHGSVYIARVP-----SGEIFAVKKFHSPLPDNFCSHPRQ 547
R F+ +H +GKG GSV + R +GE+ AVKK ++ R+
Sbjct: 7 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 66
Query: 548 SFI--------------------------VYEYLESGSLDKILNNDASAKELGWTQRLNV 581
I + EYL GSL L + + + L
Sbjct: 67 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQY 124
Query: 582 IKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAG 641
+ + YL + +H D++++N+L++ + DF + K L D
Sbjct: 125 TSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 181
Query: 642 THGNV---APELAYTMKVTEKCDVYSFGVLALEV 672
+ APE K + DV+SFGV+ E+
Sbjct: 182 GESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 215
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 79/214 (36%), Gaps = 44/214 (20%)
Query: 498 RATNDFDAKHC-----IGKGGHGSVYIARVP-----SGEIFAVKKFHSPLPDNFCSHPRQ 547
R F+ +H +GKG GSV + R +GE+ AVKK ++ R+
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 548 SFI--------------------------VYEYLESGSLDKILNNDASAKELGWTQRLNV 581
I + EYL GSL L + + + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQY 122
Query: 582 IKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAG 641
+ + YL + +H D++++N+L++ + DF + K L D
Sbjct: 123 TSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 179
Query: 642 THGNV---APELAYTMKVTEKCDVYSFGVLALEV 672
+ APE K + DV+SFGV+ E+
Sbjct: 180 GESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 27/164 (16%)
Query: 580 NVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKL 639
V +G+A F NC +H D++++NVLL G+ A + DF +A+ + DS+ K
Sbjct: 174 QVAQGMA---FLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK- 225
Query: 640 AGTHGN-------VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXX 691
GN +APE + T + DV+S+G+L E+ G +P
Sbjct: 226 ----GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP---YPGILVNSKF 278
Query: 692 XXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKR 735
++ P+ +N + SIMQ +C P RPT ++
Sbjct: 279 YKLVKDGYQMAQPAFAPKNIY-SIMQ---ACWALEPTHRPTFQQ 318
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 106/261 (40%), Gaps = 44/261 (16%)
Query: 501 NDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-----------HSPLP 538
D KH +G G +G VY + + V++F H L
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 539 D--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNC 596
C+ +I+ E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEKKN 129
Query: 597 FPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APE-LAY 652
F +H D++++N L+ + V+DF +++ + D+ ++ AG + APE LAY
Sbjct: 130 F---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--FTAHAGAKFPIKWTAPESLAY 184
Query: 653 TMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNK 711
K + K DV++FGVL E+ G P D R+ P K
Sbjct: 185 N-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDPSQVYELLEKDYRMERPE-GCPEK 238
Query: 712 FMSIMQVAFSCLDQNPVSRPT 732
+M+ +C NP RP+
Sbjct: 239 VYELMR---ACWQWNPSDRPS 256
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 49/219 (22%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPDNFCSHPR------------ 546
D C+GKG +G V+ GE AVK F S ++
Sbjct: 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENI 64
Query: 547 ---------------QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFY 591
Q +++ Y E GSL L L L ++ +A L +
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAH 120
Query: 592 LHNNCF-----PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN-----LDSSNWSKLAG 641
LH F P I H D+ SKN+L+ + ++D +A + LD N + G
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN-NPRVG 179
Query: 642 THGNVAPE-LAYTMKVT-----EKCDVYSFGVLALEVIK 674
T +APE L T++V ++ D+++FG++ EV +
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR 218
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 580 NVIKGVADALFYLHNNCFPPIVHWDISSKNVLL--DLGYEAHVSDFRIAK-FLNLDSSNW 636
N+++ + AL YLHN I H DI +N L + +E + DF ++K F L++ +
Sbjct: 172 NIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEY 228
Query: 637 SKL---AGTHGNVAPELAYTMKVT--EKCDVYSFGVLALEVIKGKHP 678
+ AGT VAPE+ T + KCD +S GVL ++ G P
Sbjct: 229 YGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 81/209 (38%), Gaps = 35/209 (16%)
Query: 501 NDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSPLPDN----------------FCS 543
DFD IG+G + V + R+ + I+A+K L ++ +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 544 HP------------RQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFY 591
HP + F V EY+ G L + + ++L ++ AL Y
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNY 125
Query: 592 LHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELA 651
LH I++ D+ NVLLD ++D+ + K S GT +APE+
Sbjct: 126 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 182
Query: 652 YTMKVTEKCDVYSFGVLALEVIKGKHPRD 680
D ++ GVL E++ G+ P D
Sbjct: 183 RGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
+V EY+ GSL L + +G Q L + + + + YLH + +H D++++N
Sbjct: 112 LVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQHY---IHRDLAARN 164
Query: 610 VLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSFG 666
VLLD + DF +AK + + V APE K DV+SFG
Sbjct: 165 VLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFG 224
Query: 667 VLALEVI 673
V E++
Sbjct: 225 VTLYELL 231
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 81/209 (38%), Gaps = 35/209 (16%)
Query: 501 NDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSPLPDN----------------FCS 543
DFD IG+G + V + R+ + I+A+K L ++ +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 544 HP------------RQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFY 591
HP + F V EY+ G L + + ++L ++ AL Y
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNY 136
Query: 592 LHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELA 651
LH I++ D+ NVLLD ++D+ + K S GT +APE+
Sbjct: 137 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 193
Query: 652 YTMKVTEKCDVYSFGVLALEVIKGKHPRD 680
D ++ GVL E++ G+ P D
Sbjct: 194 RGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+V E G L K L +E+ + ++ V+ + YL F VH D++++
Sbjct: 85 MLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMGMKYLEEKNF---VHRDLAAR 139
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
NVLL + A +SDF ++K L D S ++ + + APE K + + DV+S+
Sbjct: 140 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSY 199
Query: 666 GVLALEVIK-GKHP 678
GV E + G+ P
Sbjct: 200 GVTMWEALSYGQKP 213
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 85/211 (40%), Gaps = 49/211 (23%)
Query: 507 HCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPDNFCSHPR-------------------- 546
C+GKG +G V+ GE AVK F S ++
Sbjct: 14 ECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 547 -------QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF-- 597
Q +++ Y E GSL L L L ++ +A L +LH F
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 598 ---PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN-----LDSSNWSKLAGTHGNVAPE 649
P I H D+ SKN+L+ + ++D +A + LD N + GT +APE
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN-NPRVGTKRYMAPE 187
Query: 650 -LAYTMKVT-----EKCDVYSFGVLALEVIK 674
L T++V ++ D+++FG++ EV +
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEVAR 218
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLA-GTHGNVAPELAYTM----- 654
VH DI NVLLD+ ++DF +N D + S +A GT ++PE+ M
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 655 KVTEKCDVYSFGVLALEVIKGKHP 678
K +CD +S GV E++ G+ P
Sbjct: 257 KYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLA-GTHGNVAPELAYTM----- 654
VH DI NVLLD+ ++DF +N D + S +A GT ++PE+ M
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 655 KVTEKCDVYSFGVLALEVIKGKHP 678
K +CD +S GV E++ G+ P
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 85/211 (40%), Gaps = 49/211 (23%)
Query: 507 HCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPDNFCSHPR-------------------- 546
C+GKG +G V+ GE AVK F S ++
Sbjct: 43 ECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDM 101
Query: 547 -------QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF-- 597
Q +++ Y E GSL L L L ++ +A L +LH F
Sbjct: 102 TSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEIFGT 157
Query: 598 ---PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN-----LDSSNWSKLAGTHGNVAPE 649
P I H D+ SKN+L+ + ++D +A + LD N + GT +APE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN-NPRVGTKRYMAPE 216
Query: 650 -LAYTMKVT-----EKCDVYSFGVLALEVIK 674
L T++V ++ D+++FG++ EV +
Sbjct: 217 VLDETIQVDCFDSYKRVDIWAFGLVLWEVAR 247
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 28/143 (19%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNC-------FPPIV 601
+++ + E GSL L A + W + ++ + +A L YLH + P I
Sbjct: 98 WLITAFHEKGSLSDFLK----ANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAIS 153
Query: 602 HWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAG-THGNVAPELAYTMKVTE-- 658
H DI SKNVLL A ++DF +A L ++ K AG THG V +V E
Sbjct: 154 HRDIKSKNVLLKNNLTACIADFGLA--LKFEA---GKSAGDTHGQVGTRRYMAPEVLEGA 208
Query: 659 ---------KCDVYSFGVLALEV 672
+ D+Y+ G++ E+
Sbjct: 209 INFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 20/196 (10%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIV 601
C+ +I+ E++ G+L L + + +E+ L + ++ A+ YL F +
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEKKNF---I 131
Query: 602 HWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APE-LAYTMKVT 657
H D++++N L+ + V+DF +++ + D+ + AG + APE LAY K +
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESLAYN-KFS 188
Query: 658 EKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIM 716
K DV++FGVL E+ G P D R+ P K +M
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSP----YPGIDPSQVYELLEKDYRMERPE-GCPEKVYELM 243
Query: 717 QVAFSCLDQNPVSRPT 732
+ +C NP RP+
Sbjct: 244 R---ACWQWNPSDRPS 256
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDIS 606
Q IV ++ E SL L+ AS + + +++ + A + YLH I+H D+
Sbjct: 81 QLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLK 135
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS------KLAGTHGNVAPELAYTMKVTE-- 658
S N+ L + DF +A S WS +L+G+ +APE+
Sbjct: 136 SNNIFLHEDNTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 191
Query: 659 -KCDVYSFGVLALEVIKGKHP 678
+ DVY+FG++ E++ G+ P
Sbjct: 192 FQSDVYAFGIVLYELMTGQLP 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
+V +YL GSL + A LG LN +A ++YL + +VH +++++N
Sbjct: 109 LVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARN 163
Query: 610 VLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGV 667
VLL + V+DF +A L D +S+ +A E + K T + DV+S+GV
Sbjct: 164 VLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGV 223
Query: 668 LALEVI 673
E++
Sbjct: 224 TVWELM 229
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 35/210 (16%)
Query: 487 LLGKIVYEEIIRA----TNDFDAKHCIGK----GGHGSVYIARVPSGEIFAVKKFHSP-- 536
+LG + E+I A T A CI K G GS+ EI + K P
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM------ENEIAVLHKIKHPNI 78
Query: 537 -LPDNFCSHPRQSFIVYEYLESGSL-DKILNNDASAKELG-WTQR--LNVIKGVADALFY 591
D+ +++ + + G L D+I+ E G +T+R +I V DA+ Y
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIV-------EKGFYTERDASRLIFQVLDAVKY 131
Query: 592 LHNNCFPPIVHWDISSKNVL---LDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAP 648
LH+ IVH D+ +N+L LD + +SDF ++K + S S GT G VAP
Sbjct: 132 LHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-PGSVLSTACGTPGYVAP 187
Query: 649 ELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
E+ ++ D +S GV+A ++ G P
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 35/210 (16%)
Query: 487 LLGKIVYEEIIRA----TNDFDAKHCIGK----GGHGSVYIARVPSGEIFAVKKFHSP-- 536
+LG + E+I A T A CI K G GS+ EI + K P
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSM------ENEIAVLHKIKHPNI 78
Query: 537 -LPDNFCSHPRQSFIVYEYLESGSL-DKILNNDASAKELG-WTQR--LNVIKGVADALFY 591
D+ +++ + + G L D+I+ E G +T+R +I V DA+ Y
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIV-------EKGFYTERDASRLIFQVLDAVKY 131
Query: 592 LHNNCFPPIVHWDISSKNVL---LDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAP 648
LH+ IVH D+ +N+L LD + +SDF ++K + S S GT G VAP
Sbjct: 132 LHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-PGSVLSTACGTPGYVAP 187
Query: 649 ELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
E+ ++ D +S GV+A ++ G P
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 24/144 (16%)
Query: 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDIS 606
Q IV ++ E SL L+ + E+ + +++ + A + YLH I+H D+
Sbjct: 77 QLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---IIHRDLK 131
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS------KLAGTHGNVAPELAYTMKVTEK- 659
S N+ L + DF +A + S WS +L+G+ +APE+ +++ +K
Sbjct: 132 SNNIFLHEDLTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 184
Query: 660 -----CDVYSFGVLALEVIKGKHP 678
DVY+FG++ E++ G+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 78/195 (40%), Gaps = 17/195 (8%)
Query: 560 LDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAH 619
LD + N LG LN +A + YL + +VH D++++NVL+
Sbjct: 106 LDHVRENRG---RLGSQDLLNWCMQIAKGMSYLEDV---RLVHRDLAARNVLVKSPNHVK 159
Query: 620 VSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GK 676
++DF +A+ L++D + + G +A E + T + DV+S+GV E++ G
Sbjct: 160 ITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGA 219
Query: 677 HPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRF 736
P D RLP P + + +M + C + RP +
Sbjct: 220 KPYDGIPAREIPDLLEKG----ERLPQPPICTIDVYM----IMVKCWMIDSECRPRFREL 271
Query: 737 EVQSKQFHYNPDHNV 751
+ + +P V
Sbjct: 272 VSEFSRMARDPQRFV 286
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 35/210 (16%)
Query: 487 LLGKIVYEEIIRA----TNDFDAKHCIGK----GGHGSVYIARVPSGEIFAVKKFHSP-- 536
+LG + E+I A T A CI K G GS+ EI + K P
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM------ENEIAVLHKIKHPNI 78
Query: 537 -LPDNFCSHPRQSFIVYEYLESGSL-DKILNNDASAKELG-WTQR--LNVIKGVADALFY 591
D+ +++ + + G L D+I+ E G +T+R +I V DA+ Y
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIV-------EKGFYTERDASRLIFQVLDAVKY 131
Query: 592 LHNNCFPPIVHWDISSKNVL---LDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAP 648
LH+ IVH D+ +N+L LD + +SDF ++K + S S GT G VAP
Sbjct: 132 LHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-PGSVLSTACGTPGYVAP 187
Query: 649 ELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
E+ ++ D +S GV+A ++ G P
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
+V +YL GSL + A LG LN +A ++YL + +VH +++++N
Sbjct: 91 LVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARN 145
Query: 610 VLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGV 667
VLL + V+DF +A L D +S+ +A E + K T + DV+S+GV
Sbjct: 146 VLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGV 205
Query: 668 LALEVI 673
E++
Sbjct: 206 TVWELM 211
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 18/141 (12%)
Query: 543 SHPRQSFIVYEYLESGSLDKILNND----ASAKELGWTQRLNVIKGVADALFYLHNNCFP 598
S PR FI+ E + G L L + L L+V + +A YL N F
Sbjct: 105 SLPR--FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF- 161
Query: 599 PIVHWDISSKNVLLDL---GYEAHVSDFRIAKFLNLDSSNWSKLAGTH----GNVAPELA 651
+H DI+++N LL G A + DF +A+ ++ +++ + G + PE
Sbjct: 162 --IHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWMPPEAF 217
Query: 652 YTMKVTEKCDVYSFGVLALEV 672
T K D +SFGVL E+
Sbjct: 218 MEGIFTSKTDTWSFGVLLWEI 238
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+V E G L K L +E+ + ++ V+ + YL F VH +++++
Sbjct: 411 MLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKNF---VHRNLAAR 465
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
NVLL + A +SDF ++K L D S ++ + + APE K + + DV+S+
Sbjct: 466 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSY 525
Query: 666 GVLALEVIK-GKHP 678
GV E + G+ P
Sbjct: 526 GVTMWEALSYGQKP 539
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 543 SHPRQSFIVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIV 601
S P F+V EY+ G L D I N L + + + + + Y H + +V
Sbjct: 86 STPSDIFMVMEYVSGGELFDYICKNG----RLDEKESRRLFQQILSGVDYCHRHM---VV 138
Query: 602 HWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE-LAYTMKVTEKC 660
H D+ +NVLLD A ++DF ++ ++ D G+ APE ++ + +
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRXSCGSPNYAAPEVISGRLYAGPEV 197
Query: 661 DVYSFGVLALEVIKGKHPRD 680
D++S GV+ ++ G P D
Sbjct: 198 DIWSSGVILYALLCGTLPFD 217
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 18/141 (12%)
Query: 543 SHPRQSFIVYEYLESGSLDKILNND----ASAKELGWTQRLNVIKGVADALFYLHNNCFP 598
S PR FI+ E + G L L + L L+V + +A YL N F
Sbjct: 120 SLPR--FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF- 176
Query: 599 PIVHWDISSKNVLLDL---GYEAHVSDFRIAKFLNLDSSNWSKLAGTH----GNVAPELA 651
+H DI+++N LL G A + DF +A+ ++ +++ + G + PE
Sbjct: 177 --IHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWMPPEAF 232
Query: 652 YTMKVTEKCDVYSFGVLALEV 672
T K D +SFGVL E+
Sbjct: 233 MEGIFTSKTDTWSFGVLLWEI 253
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 53/264 (20%)
Query: 509 IGKGGHGSVYIAR-VPSGEIFAVK----KFHSPLPDNF--------CSHPR--------- 546
+G G G VY A+ +G + A K K L D C HP
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 547 ---QSFIVYEYLESGSLDKI-LNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVH 602
+ +I+ E+ G++D I L D E Q V + + +AL +LH+ I+H
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTE---PQIQVVCRQMLEALNFLHSK---RIIH 132
Query: 603 WDISSKNVLLDLGYEAHVSDFRIAKFLNLDS-SNWSKLAGTHGNVAPE--LAYTMKVTE- 658
D+ + NVL+ L + ++DF ++ NL + GT +APE + TMK T
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPY 191
Query: 659 --KCDVYSFGVLALEVIKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNK----F 712
K D++S G+ +E+ + + P ++ P+L +K F
Sbjct: 192 DYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI-------AKSDPPTLLTPSKWSVEF 244
Query: 713 MSIMQVAFSCLDQNPVSRPTMKRF 736
+++A LD+NP +RP+ +
Sbjct: 245 RDFLKIA---LDKNPETRPSAAQL 265
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 83/224 (37%), Gaps = 48/224 (21%)
Query: 498 RATNDFDAKHC-----IGKGGHGSVYIARVP-----SGEIFAVKKFHSPLPDNFCSHPRQ 547
R F+ +H +GKG GSV + R +GE+ AVKK ++ R+
Sbjct: 5 RDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 548 SFI--------------------------VYEYLESGSLDKILNNDASAKELGWTQRLNV 581
I + E+L GSL + L + + + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQK--HKERIDHIKLLQY 122
Query: 582 IKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAG 641
+ + YL + +H D++++N+L++ + DF + K L D
Sbjct: 123 TSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 179
Query: 642 THGNV---APELAYTMKVTEKCDVYSFGVLALEVI----KGKHP 678
+ APE K + DV+SFGV+ E+ K K P
Sbjct: 180 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 223
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 18/141 (12%)
Query: 543 SHPRQSFIVYEYLESGSLDKILNND----ASAKELGWTQRLNVIKGVADALFYLHNNCFP 598
S PR FI+ E + G L L + L L+V + +A YL N F
Sbjct: 97 SLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF- 153
Query: 599 PIVHWDISSKNVLLDL---GYEAHVSDFRIAKFLNLDSSNWSKLAGTH----GNVAPELA 651
+H DI+++N LL G A + DF +A+ ++ +++ + G + PE
Sbjct: 154 --IHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWMPPEAF 209
Query: 652 YTMKVTEKCDVYSFGVLALEV 672
T K D +SFGVL E+
Sbjct: 210 MEGIFTSKTDTWSFGVLLWEI 230
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 24/144 (16%)
Query: 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDIS 606
Q IV ++ E SL L+ + E+ + +++ + A + YLH I+H D+
Sbjct: 97 QLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---IIHRDLK 151
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS------KLAGTHGNVAPELAYTMKVTEK- 659
S N+ L + DF +A + S WS +L+G+ +APE+ +++ +K
Sbjct: 152 SNNIFLHEDLTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 204
Query: 660 -----CDVYSFGVLALEVIKGKHP 678
DVY+FG++ E++ G+ P
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 268
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 269 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSA 327
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H +++++N L+ + V+DF +++ + D+ ++ AG +
Sbjct: 328 MEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKW 382
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 383 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 437
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 438 PE-GCPEKVYELMR---ACWQWNPSDRPS 462
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 80/214 (37%), Gaps = 44/214 (20%)
Query: 498 RATNDFDAKHC-----IGKGGHGSVYIARVP-----SGEIFAVKKFHSPLPDNFCSHPRQ 547
R F+ +H +GKG GSV + R +GE+ AVKK ++ R+
Sbjct: 3 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 62
Query: 548 SFI--------------------------VYEYLESGSLDKILNNDASAKELGWTQRLNV 581
I + EYL GSL L + + + L
Sbjct: 63 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQY 120
Query: 582 IKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAG 641
+ + YL + +H +++++N+L++ + DF + K L D +
Sbjct: 121 TSQICKGMEYLGTKRY---IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEP 177
Query: 642 THGNV---APELAYTMKVTEKCDVYSFGVLALEV 672
+ APE K + DV+SFGV+ E+
Sbjct: 178 GESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 211
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 78/209 (37%), Gaps = 44/209 (21%)
Query: 503 FDAKHC-----IGKGGHGSVYIARVP-----SGEIFAVKKFHSPLPDNFCSHPRQSFI-- 550
F+ +H +GKG GSV + R +GE+ AVKK ++ R+ I
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 551 ------------------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVA 586
+ EYL GSL L + + + L +
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQIC 142
Query: 587 DALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV 646
+ YL + +H D++++N+L++ + DF + K L D +
Sbjct: 143 KGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 647 ---APELAYTMKVTEKCDVYSFGVLALEV 672
APE K + DV+SFGV+ E+
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 18/141 (12%)
Query: 543 SHPRQSFIVYEYLESGSLDKILNND----ASAKELGWTQRLNVIKGVADALFYLHNNCFP 598
S PR FI+ E + G L L + L L+V + +A YL N F
Sbjct: 120 SLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF- 176
Query: 599 PIVHWDISSKNVLLDL---GYEAHVSDFRIAKFLNLDSSNWSKLAGTH----GNVAPELA 651
+H DI+++N LL G A + DF +A+ ++ +++ + G + PE
Sbjct: 177 --IHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWMPPEAF 232
Query: 652 YTMKVTEKCDVYSFGVLALEV 672
T K D +SFGVL E+
Sbjct: 233 MEGIFTSKTDTWSFGVLLWEI 253
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 18/141 (12%)
Query: 543 SHPRQSFIVYEYLESGSLDKILNND----ASAKELGWTQRLNVIKGVADALFYLHNNCFP 598
S PR FI+ E + G L L + L L+V + +A YL N F
Sbjct: 122 SLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF- 178
Query: 599 PIVHWDISSKNVLLDL---GYEAHVSDFRIAKFLNLDSSNWSKLAGTH----GNVAPELA 651
+H DI+++N LL G A + DF +A+ ++ +++ + G + PE
Sbjct: 179 --IHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWMPPEAF 234
Query: 652 YTMKVTEKCDVYSFGVLALEV 672
T K D +SFGVL E+
Sbjct: 235 MEGIFTSKTDTWSFGVLLWEI 255
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 88/226 (38%), Gaps = 53/226 (23%)
Query: 498 RATNDFDAKHCIGKGGHGSVYIA--------------RVPSGEIFA-------------- 529
R DF+ C+G+GG G V+ A R+P+ E+
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 530 ----VKKFHSPLPDNFCSHPRQS------FIVYEYLESGSLDKILNNDASAKELGWTQRL 579
V+ F++ L N + S +I + +L +N + +E + L
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 580 NVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKL 639
++ +A+A+ +LH+ ++H D+ N+ + V DF + ++ D + L
Sbjct: 122 HIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 640 A------------GTHGNVAPELAYTMKVTEKCDVYSFGVLALEVI 673
GT ++PE + + K D++S G++ E++
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 18/141 (12%)
Query: 543 SHPRQSFIVYEYLESGSLDKILNND----ASAKELGWTQRLNVIKGVADALFYLHNNCFP 598
S PR FI+ E + G L L + L L+V + +A YL N F
Sbjct: 105 SLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF- 161
Query: 599 PIVHWDISSKNVLLDL---GYEAHVSDFRIAKFLNLDSSNWSKLAGTH----GNVAPELA 651
+H DI+++N LL G A + DF +A+ ++ +++ + G + PE
Sbjct: 162 --IHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWMPPEAF 217
Query: 652 YTMKVTEKCDVYSFGVLALEV 672
T K D +SFGVL E+
Sbjct: 218 MEGIFTSKTDTWSFGVLLWEI 238
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 78/209 (37%), Gaps = 44/209 (21%)
Query: 503 FDAKHC-----IGKGGHGSVYIARVP-----SGEIFAVKKFHSPLPDNFCSHPRQSFI-- 550
F+ +H +GKG GSV + R +GE+ AVKK ++ R+ I
Sbjct: 5 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 64
Query: 551 ------------------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVA 586
+ EYL GSL L + + + L +
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQIC 122
Query: 587 DALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV 646
+ YL + +H D++++N+L++ + DF + K L D +
Sbjct: 123 KGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 179
Query: 647 ---APELAYTMKVTEKCDVYSFGVLALEV 672
APE K + DV+SFGV+ E+
Sbjct: 180 FWYAPESLTESKFSVASDVWSFGVVLYEL 208
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 24/144 (16%)
Query: 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDIS 606
Q IV ++ E SL L+ + E+ + +++ + A + YLH I+H D+
Sbjct: 105 QLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---IIHRDLK 159
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS------KLAGTHGNVAPELAYTMKVTEK- 659
S N+ L + DF +A + S WS +L+G+ +APE+ +++ +K
Sbjct: 160 SNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 212
Query: 660 -----CDVYSFGVLALEVIKGKHP 678
DVY+FG++ E++ G+ P
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 18/141 (12%)
Query: 543 SHPRQSFIVYEYLESGSLDKILNND----ASAKELGWTQRLNVIKGVADALFYLHNNCFP 598
S PR FI+ E + G L L + L L+V + +A YL N F
Sbjct: 106 SLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF- 162
Query: 599 PIVHWDISSKNVLLDL---GYEAHVSDFRIAKFLNLDSSNWSKLAGTH----GNVAPELA 651
+H DI+++N LL G A + DF +A+ ++ +++ + G + PE
Sbjct: 163 --IHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWMPPEAF 218
Query: 652 YTMKVTEKCDVYSFGVLALEV 672
T K D +SFGVL E+
Sbjct: 219 MEGIFTSKTDTWSFGVLLWEI 239
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 18/141 (12%)
Query: 543 SHPRQSFIVYEYLESGSLDKILNND----ASAKELGWTQRLNVIKGVADALFYLHNNCFP 598
S PR FI+ E + G L L + L L+V + +A YL N F
Sbjct: 112 SLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF- 168
Query: 599 PIVHWDISSKNVLLDL---GYEAHVSDFRIAKFLNLDSSNWSKLAGTH----GNVAPELA 651
+H DI+++N LL G A + DF +A+ ++ +++ + G + PE
Sbjct: 169 --IHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWMPPEAF 224
Query: 652 YTMKVTEKCDVYSFGVLALEV 672
T K D +SFGVL E+
Sbjct: 225 MEGIFTSKTDTWSFGVLLWEI 245
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 18/141 (12%)
Query: 543 SHPRQSFIVYEYLESGSLDKILNND----ASAKELGWTQRLNVIKGVADALFYLHNNCFP 598
S PR FI+ E + G L L + L L+V + +A YL N F
Sbjct: 106 SLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF- 162
Query: 599 PIVHWDISSKNVLLDL---GYEAHVSDFRIAKFLNLDSSNWSKLAGTH----GNVAPELA 651
+H DI+++N LL G A + DF +A+ ++ +++ + G + PE
Sbjct: 163 --IHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWMPPEAF 218
Query: 652 YTMKVTEKCDVYSFGVLALEV 672
T K D +SFGVL E+
Sbjct: 219 MEGIFTSKTDTWSFGVLLWEI 239
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A+ + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 117 LNWCVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 173
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 174 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 229
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 230 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 279
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 53/264 (20%)
Query: 509 IGKGGHGSVYIAR-VPSGEIFAVK----KFHSPLPDNF--------CSHPR--------- 546
+G G G VY A+ +G + A K K L D C HP
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 547 ---QSFIVYEYLESGSLDKI-LNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVH 602
+ +I+ E+ G++D I L D E Q V + + +AL +LH+ I+H
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTE---PQIQVVCRQMLEALNFLHSK---RIIH 140
Query: 603 WDISSKNVLLDLGYEAHVSDFRIAKFLNLDS-SNWSKLAGTHGNVAPE--LAYTMKVTE- 658
D+ + NVL+ L + ++DF ++ NL + GT +APE + TMK T
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPY 199
Query: 659 --KCDVYSFGVLALEVIKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNK----F 712
K D++S G+ +E+ + + P ++ P+L +K F
Sbjct: 200 DYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI-------AKSDPPTLLTPSKWSVEF 252
Query: 713 MSIMQVAFSCLDQNPVSRPTMKRF 736
+++A LD+NP +RP+ +
Sbjct: 253 RDFLKIA---LDKNPETRPSAAQL 273
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 249 IDWGRC------PQLSLLDVSINNITGNIP---FEIGESPQLQYLDLSSNYIVGEIPTQL 299
+ W +C ++ LD+S N ++ F+ ++Q L LS++Y +G +
Sbjct: 200 LGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMG---SSF 256
Query: 300 GNIIYLN--RISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLN 357
G+ + + + G + SG ++ DLS + + + L L
Sbjct: 257 GHTNFKDPDNFTFKGLEASG-----------VKTCDLSKSKIFALLKSVFSHFTDLEQLT 305
Query: 358 LSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPR 417
L+ N++++ L HL +L+LS NFLG S ++ LE L+LSYN++ L +
Sbjct: 306 LAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQ 365
Query: 418 CFEELHGLLHIDISYNKLEGHIPNSTTFRDAPLEAL 453
F L L + + N+L+ +P+ R L+ +
Sbjct: 366 SFLGLPNLKELALDTNQLKS-VPDGIFDRLTSLQKI 400
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 18/141 (12%)
Query: 543 SHPRQSFIVYEYLESGSLDKILNND----ASAKELGWTQRLNVIKGVADALFYLHNNCFP 598
S PR FI+ E + G L L + L L+V + +A YL N F
Sbjct: 146 SLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF- 202
Query: 599 PIVHWDISSKNVLLDL---GYEAHVSDFRIAKFLNLDSSNWSKLAGTH----GNVAPELA 651
+H DI+++N LL G A + DF +A+ ++ + + + G + PE
Sbjct: 203 --IHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRAGYYRKGGCAMLPVKWMPPEAF 258
Query: 652 YTMKVTEKCDVYSFGVLALEV 672
T K D +SFGVL E+
Sbjct: 259 MEGIFTSKTDTWSFGVLLWEI 279
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 81/209 (38%), Gaps = 35/209 (16%)
Query: 501 NDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSPLPDN----------------FCS 543
DFD IG+G + V + R+ + I+A++ L ++ +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 544 HP------------RQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFY 591
HP + F V EY+ G L + + ++L ++ AL Y
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNY 168
Query: 592 LHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELA 651
LH I++ D+ NVLLD ++D+ + K S GT +APE+
Sbjct: 169 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEIL 225
Query: 652 YTMKVTEKCDVYSFGVLALEVIKGKHPRD 680
D ++ GVL E++ G+ P D
Sbjct: 226 RGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 79/209 (37%), Gaps = 44/209 (21%)
Query: 503 FDAKHC-----IGKGGHGSVYIARVP-----SGEIFAVKKFHSPLPDNFCSHPRQSFI-- 550
F+ +H +GKG GSV + R +GE+ AVKK ++ R+ I
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 551 ------------------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVA 586
+ EYL GSL L + + + L +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQIC 124
Query: 587 DALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV 646
+ YL + +H D++++N+L++ + DF + K L D + +
Sbjct: 125 KGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI 181
Query: 647 ---APELAYTMKVTEKCDVYSFGVLALEV 672
APE K + DV+SFGV+ E+
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 18/141 (12%)
Query: 543 SHPRQSFIVYEYLESGSLDKILNND----ASAKELGWTQRLNVIKGVADALFYLHNNCFP 598
S PR FI+ E + G L L + L L+V + +A YL N F
Sbjct: 120 SLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF- 176
Query: 599 PIVHWDISSKNVLLDL---GYEAHVSDFRIAKFLNLDSSNWSKLAGTH----GNVAPELA 651
+H DI+++N LL G A + DF +A+ ++ +++ + G + PE
Sbjct: 177 --IHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWMPPEAF 232
Query: 652 YTMKVTEKCDVYSFGVLALEV 672
T K D +SFGVL E+
Sbjct: 233 MEGIFTSKTDTWSFGVLLWEI 253
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 18/141 (12%)
Query: 543 SHPRQSFIVYEYLESGSLDKILNND----ASAKELGWTQRLNVIKGVADALFYLHNNCFP 598
S PR FI+ E + G L L + L L+V + +A YL N F
Sbjct: 132 SLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF- 188
Query: 599 PIVHWDISSKNVLLDL---GYEAHVSDFRIAKFLNLDSSNWSKLAGTH----GNVAPELA 651
+H DI+++N LL G A + DF +A+ ++ +++ + G + PE
Sbjct: 189 --IHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWMPPEAF 244
Query: 652 YTMKVTEKCDVYSFGVLALEV 672
T K D +SFGVL E+
Sbjct: 245 MEGIFTSKTDTWSFGVLLWEI 265
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 78/209 (37%), Gaps = 44/209 (21%)
Query: 503 FDAKHC-----IGKGGHGSVYIARVP-----SGEIFAVKKFHSPLPDNFCSHPRQSFI-- 550
F+ +H +GKG GSV + R +GE+ AVKK ++ R+ I
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 551 ------------------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVA 586
+ EYL GSL L + + + L +
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQIC 142
Query: 587 DALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV 646
+ YL + +H D++++N+L++ + DF + K L D +
Sbjct: 143 KGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 647 ---APELAYTMKVTEKCDVYSFGVLALEV 672
APE K + DV+SFGV+ E+
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 78/209 (37%), Gaps = 44/209 (21%)
Query: 503 FDAKHC-----IGKGGHGSVYIARVP-----SGEIFAVKKFHSPLPDNFCSHPRQSFI-- 550
F+ +H +GKG GSV + R +GE+ AVKK ++ R+ I
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 551 ------------------------VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVA 586
+ EYL GSL L + + + L +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQIC 124
Query: 587 DALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV 646
+ YL + +H D++++N+L++ + DF + K L D +
Sbjct: 125 KGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
Query: 647 ---APELAYTMKVTEKCDVYSFGVLALEV 672
APE K + DV+SFGV+ E+
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 310
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 311 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSA 369
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H +++++N L+ + V+DF +++ + D+ ++ AG +
Sbjct: 370 MEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKW 424
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 425 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 479
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 480 PE-GCPEKVYELMR---ACWQWNPSDRPS 504
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 18/141 (12%)
Query: 543 SHPRQSFIVYEYLESGSLDKILNND----ASAKELGWTQRLNVIKGVADALFYLHNNCFP 598
S PR FI+ E + G L L + L L+V + +A YL N F
Sbjct: 123 SLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF- 179
Query: 599 PIVHWDISSKNVLLDL---GYEAHVSDFRIAKFLNLDSSNWSKLAGTH----GNVAPELA 651
+H DI+++N LL G A + DF +A+ ++ + + + G + PE
Sbjct: 180 --IHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRAGYYRKGGCAMLPVKWMPPEAF 235
Query: 652 YTMKVTEKCDVYSFGVLALEV 672
T K D +SFGVL E+
Sbjct: 236 MEGIFTSKTDTWSFGVLLWEI 256
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I++ D+ +NVLLD +SD +A L + AGT G +APEL +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GV E+I + P
Sbjct: 370 VDYFALGVTLYEMIAARGP 388
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 493 YEEIIRATNDFDAKHCIGKGGHGSVY-----------IARVPSGEIFAVKKF-------- 533
Y++ D KH +G G +G VY + + V++F
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 271
Query: 534 ---HSPLPD--NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588
H L C+ +I+ E++ G+L L + + +E+ L + ++ A
Sbjct: 272 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSA 330
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-- 646
+ YL F +H +++++N L+ + V+DF +++ + D+ ++ AG +
Sbjct: 331 MEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKW 385
Query: 647 -APE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPY 703
APE LAY K + K DV++FGVL E+ G P D R+
Sbjct: 386 TAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMER 440
Query: 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P K +M+ +C NP RP+
Sbjct: 441 PE-GCPEKVYELMR---ACWQWNPSDRPS 465
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I++ D+ +NVLLD +SD +A L + AGT G +APEL +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GV E+I + P
Sbjct: 370 VDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I++ D+ +NVLLD +SD +A L + AGT G +APEL +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GV E+I + P
Sbjct: 370 VDYFALGVTLYEMIAARGP 388
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 328 NLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFL 387
+ E LDL + L+ + L KL +LNL +N+L D+L L L L++N L
Sbjct: 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL 95
Query: 388 GEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIP 440
+ L+KL L N L L F+ L L + ++ N+L+ IP
Sbjct: 96 ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIP 147
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 326 LINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIEL-DNLIHLSELDLSH 384
L L +L+L N L L +L L L++N+L+ +P+ + D+L L +L L
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS-LPLGVFDHLTQLDKLYLGG 116
Query: 385 NFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPNSTT 444
N L S R+ L++L L+ N L + F++L L + +S N+L+ +P+
Sbjct: 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAF 175
Query: 445 FRDAPLEALQ--GNKGLC 460
R L+ + GN+ C
Sbjct: 176 DRLGKLQTITLFGNQFDC 193
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 6/174 (3%)
Query: 263 SINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGE 322
S++++ IP + + LDL S + + L ++L N+L G
Sbjct: 25 SLDSVPSGIPADT------EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGV 78
Query: 323 LGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDL 382
L L L L+ N L++ L L +L L L N+L D L L EL L
Sbjct: 79 FDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138
Query: 383 SHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLE 436
+ N L + ++ +L+ L+LS N L + F+ L L I + N+ +
Sbjct: 139 NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I++ D+ +NVLLD +SD +A L + AGT G +APEL +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GV E+I + P
Sbjct: 370 VDYFALGVTLYEMIAARGP 388
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 328 NLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFL 387
+ E LDL + L+ + L KL +LNL +N+L D+L L L L++N L
Sbjct: 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL 95
Query: 388 GEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIP 440
+ L+KL L N L L F+ L L + ++ N+L+ IP
Sbjct: 96 ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIP 147
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 326 LINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIEL-DNLIHLSELDLSH 384
L L +L+L N L L +L L L++N+L+ +P+ + D+L L +L L
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS-LPLGVFDHLTQLDKLYLGG 116
Query: 385 NFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPNSTT 444
N L S R+ L++L L+ N L + F++L L + +S N+L+ +P+
Sbjct: 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAF 175
Query: 445 FRDAPLEALQ--GNKGLCGDIRGFLSCMSYRKASRKI 479
R L+ + GN+ C R+ S K+
Sbjct: 176 DRLGKLQTITLFGNQFDCSRCETLYLSQWIRENSNKV 212
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 6/174 (3%)
Query: 263 SINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGE 322
S++++ IP + + LDL S + + L ++L N+L G
Sbjct: 25 SLDSVPSGIPADT------EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGV 78
Query: 323 LGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDL 382
L L L L+ N L++ L L +L L L N+L D L L EL L
Sbjct: 79 FDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138
Query: 383 SHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLE 436
+ N L + ++ +L+ L+LS N L + F+ L L I + N+ +
Sbjct: 139 NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 47/216 (21%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSP-----LP-------------- 538
AT+ ++ IG G +G+VY AR P SG A+K P LP
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 539 ----------DNFCSHPR-----QSFIVYEYLESG---SLDKILNNDASAKELGWTQRLN 580
+ C+ R + +V+E+++ LDK A+ + +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK-----D 116
Query: 581 VIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLA 640
+++ L +LH NC IVH D+ +N+L+ G ++DF +A+ + + + +
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LAPVV 172
Query: 641 GTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 676
T APE+ D++S G + E+ + K
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+I+ E++ GSL L +D K L + ++ +A+ + Y+ + +H D+ +
Sbjct: 83 YIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY---IHRDLRAA 138
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSF 665
NVL+ ++DF +A+ + + + ++ G + APE T K +V+SF
Sbjct: 139 NVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSF 196
Query: 666 GVLALEVIK-GKHP 678
G+L E++ GK P
Sbjct: 197 GILLYEIVTYGKIP 210
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 24/144 (16%)
Query: 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDIS 606
Q IV ++ E SL L+ + E+ + +++ + A + YLH I+H D+
Sbjct: 77 QLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---IIHRDLK 131
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS------KLAGTHGNVAPELAYTMKVTEK- 659
S N+ L + DF +A S WS +L+G+ +APE+ +++ +K
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 184
Query: 660 -----CDVYSFGVLALEVIKGKHP 678
DVY+FG++ E++ G+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 24/144 (16%)
Query: 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDIS 606
Q IV ++ E SL L+ + E+ + +++ + A + YLH I+H D+
Sbjct: 77 QLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---IIHRDLK 131
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS------KLAGTHGNVAPELAYTMKVTEK- 659
S N+ L + DF +A S WS +L+G+ +APE+ +++ +K
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 184
Query: 660 -----CDVYSFGVLALEVIKGKHP 678
DVY+FG++ E++ G+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 18/141 (12%)
Query: 543 SHPRQSFIVYEYLESGSLDKILNND----ASAKELGWTQRLNVIKGVADALFYLHNNCFP 598
S PR FI+ E + G L L + L L+V + +A YL N F
Sbjct: 106 SLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF- 162
Query: 599 PIVHWDISSKNVLLDL---GYEAHVSDFRIAKFLNLDSSNWSKLAGTH----GNVAPELA 651
+H DI+++N LL G A + DF +A+ ++ +++ + G + PE
Sbjct: 163 --IHRDIAARNCLLTCPGPGRVAKIGDFGMAQ--DIYRASYYRKGGCAMLPVKWMPPEAF 218
Query: 652 YTMKVTEKCDVYSFGVLALEV 672
T K D +SFGVL E+
Sbjct: 219 MEGIFTSKTDTWSFGVLLWEI 239
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 30/205 (14%)
Query: 501 NDFDAKHCIGKGGHGSVYIARVPSG----EIFAVK-----------KFHSPLPDNFCSHP 545
+ F+ +G+G G V++ + SG +++A+K + + + +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 546 RQSFIV---YEYLESGSLDKILNN-------DASAKELGWTQR--LNVIKGVADALFYLH 593
FIV Y + G L IL+ +KE+ +T+ + +A AL +LH
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ I++ D+ +N+LLD ++DF ++K GT +APE+
Sbjct: 144 SLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
T+ D +SFGVL E++ G P
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 24/144 (16%)
Query: 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDIS 606
Q IV ++ E SL L+ + E+ + +++ + A + YLH I+H D+
Sbjct: 79 QLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---IIHRDLK 133
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS------KLAGTHGNVAPELAYTMKVTEK- 659
S N+ L + DF +A S WS +L+G+ +APE+ +++ +K
Sbjct: 134 SNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 186
Query: 660 -----CDVYSFGVLALEVIKGKHP 678
DVY+FG++ E++ G+ P
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 103/272 (37%), Gaps = 56/272 (20%)
Query: 500 TNDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVKKFHS----------------------- 535
+D + +G+G +G V R VPSG+I AVK+ +
Sbjct: 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC 109
Query: 536 PLPDNFCS---HPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVA----DA 588
P F +I E +++ SLDK + G T +++ +A A
Sbjct: 110 PFTVTFYGALFREGDVWICMELMDT-SLDKFYKQ---VIDKGQTIPEDILGKIAVSIVKA 165
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAP 648
L +LH+ ++H D+ NVL++ + + DF I+ +L +DS + AG +AP
Sbjct: 166 LEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL-VDSVAKTIDAGCKPYMAP 222
Query: 649 EL--------AYTMKVTEKCDVYSFGVLALEVIKGKHPRDXXXXXXXXXXXXXXXXXDSR 700
E Y++ K D++S G+ +E+ + P D
Sbjct: 223 ERINPELNQKGYSV----KSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE----- 273
Query: 701 LPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P P L + CL +N RPT
Sbjct: 274 -PSPQLPADKFSAEFVDFTSQCLKKNSKERPT 304
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 24/144 (16%)
Query: 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDIS 606
Q IV ++ E SL L+ + E+ + +++ + A + YLH I+H D+
Sbjct: 105 QLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---IIHRDLK 159
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS------KLAGTHGNVAPELAYTMKVTEK- 659
S N+ L + DF +A S WS +L+G+ +APE+ +++ +K
Sbjct: 160 SNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 212
Query: 660 -----CDVYSFGVLALEVIKGKHP 678
DVY+FG++ E++ G+ P
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 24/144 (16%)
Query: 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDIS 606
Q IV ++ E SL L+ + E+ + +++ + A + YLH I+H D+
Sbjct: 82 QLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---IIHRDLK 136
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS------KLAGTHGNVAPELAYTMKVTEK- 659
S N+ L + DF +A S WS +L+G+ +APE+ +++ +K
Sbjct: 137 SNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 189
Query: 660 -----CDVYSFGVLALEVIKGKHP 678
DVY+FG++ E++ G+ P
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 30/205 (14%)
Query: 501 NDFDAKHCIGKGGHGSVYIARVPSG----EIFAVK-----------KFHSPLPDNFCSHP 545
+ F+ +G+G G V++ + SG +++A+K + + + +
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 546 RQSFIV---YEYLESGSLDKILNN-------DASAKELGWTQR--LNVIKGVADALFYLH 593
FIV Y + G L IL+ +KE+ +T+ + +A AL +LH
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 144
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ I++ D+ +N+LLD ++DF ++K GT +APE+
Sbjct: 145 SLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 201
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
T+ D +SFGVL E++ G P
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 47/216 (21%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSP-----LP-------------- 538
AT+ ++ IG G +G+VY AR P SG A+K P LP
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 539 ----------DNFCSHPR-----QSFIVYEYLESG---SLDKILNNDASAKELGWTQRLN 580
+ C+ R + +V+E+++ LDK A+ + +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK-----D 116
Query: 581 VIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLA 640
+++ L +LH NC IVH D+ +N+L+ G ++DF +A+ + + + +
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV 173
Query: 641 GTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 676
T APE+ D++S G + E+ + K
Sbjct: 174 -TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 24/144 (16%)
Query: 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDIS 606
Q IV ++ E SL L+ + E+ + +++ + A + YLH I+H D+
Sbjct: 104 QLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---IIHRDLK 158
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS------KLAGTHGNVAPELAYTMKVTEK- 659
S N+ L + DF +A S WS +L+G+ +APE+ +++ +K
Sbjct: 159 SNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 211
Query: 660 -----CDVYSFGVLALEVIKGKHP 678
DVY+FG++ E++ G+ P
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 24/144 (16%)
Query: 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDIS 606
Q IV ++ E SL L+ + E+ + +++ + A + YLH I+H D+
Sbjct: 82 QLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---IIHRDLK 136
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS------KLAGTHGNVAPELAYTMKVTEK- 659
S N+ L + DF +A S WS +L+G+ +APE+ +++ +K
Sbjct: 137 SNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 189
Query: 660 -----CDVYSFGVLALEVIKGKHP 678
DVY+FG++ E++ G+ P
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 92/256 (35%), Gaps = 48/256 (18%)
Query: 509 IGKGGHGSVYIARVPS-GEIFAVKKFHSPLPDNF-------------------------C 542
IG+G G V+ R+ + + AVK LP + C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 543 SHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVH 602
+ + +IV E ++ G L + + L L ++ A + YL + C +H
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESKC---CIH 236
Query: 603 WDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-----APELAYTMKVT 657
D++++N L+ +SDF +++ ++ +G V APE + +
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSR---EEADGVXAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 658 EKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIM 716
+ DV+SFG+L E G P RLP P L F +
Sbjct: 294 SESDVWSFGILLWETFSLGASP----YPNLSNQQTREFVEKGGRLPCPELCPDAVFRLME 349
Query: 717 QVAFSCLDQNPVSRPT 732
Q C P RP+
Sbjct: 350 Q----CWAYEPGQRPS 361
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 85/213 (39%), Gaps = 47/213 (22%)
Query: 501 NDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVK---------------------------- 531
N+F+ +GKG G V + + +G +A+K
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 532 KFHSPLPDNFCSHPRQSFIVYEYLESGSL------DKILNNDASAKELGWTQRLNVIKGV 585
F + L +F +H R F++ EY G L +++ + D A+ G +
Sbjct: 68 PFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSED-RARFYGAE--------I 117
Query: 586 ADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN 645
AL YLH+ +V+ D+ +N++LD ++DF + K D + GT
Sbjct: 118 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEY 175
Query: 646 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+APE+ D + GV+ E++ G+ P
Sbjct: 176 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 127 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 239
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 240 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 289
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 10/127 (7%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
+V EY+ GSL L + +G Q L + + + + YLH+ + +H +++++N
Sbjct: 95 LVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHSQHY---IHRNLAARN 147
Query: 610 VLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSFG 666
VLLD + DF +AK + + V APE K DV+SFG
Sbjct: 148 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFG 207
Query: 667 VLALEVI 673
V E++
Sbjct: 208 VTLYELL 214
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 35/204 (17%)
Query: 503 FDAKHCIGKGGHGSVY-IARVPSGEIFAVKKFHSPLP-DNFC-----------SHPR--- 546
+D +G G G V+ +G +F K ++P P D + HP+
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLIN 112
Query: 547 ---------QSFIVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNC 596
+ ++ E+L G L D+I D E + +N ++ + L ++H +
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSE---AEVINYMRQACEGLKHMHEHS 169
Query: 597 FPPIVHWDISSKNVLLDLGYEAHVS--DFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTM 654
IVH DI +N++ + + V DF +A LN D A T APE+
Sbjct: 170 ---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA-TAEFAAPEIVDRE 225
Query: 655 KVTEKCDVYSFGVLALEVIKGKHP 678
V D+++ GVL ++ G P
Sbjct: 226 PVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 127 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 239
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 240 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 289
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 122 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 234
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 235 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 284
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 84/215 (39%), Gaps = 46/215 (21%)
Query: 501 NDFDAKHCIGKGGHGSVYIARVP-------------------------SGEIFAVKKF-H 534
ND + IG+G G V AR+ +GE+ + K H
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 535 SPLPDNF---CSHPRQSFIVYEYLESGSL------DKILNND-------ASAKELGWTQR 578
P N C H ++ EY G+L ++L D ++A L Q
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
L+ VA + YL F +H D++++N+L+ Y A ++DF +++ +
Sbjct: 135 LHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 191
Query: 639 LAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVI 673
L Y++ T DV+S+GVL E++
Sbjct: 192 RLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 225
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 85/213 (39%), Gaps = 47/213 (22%)
Query: 501 NDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVK---------------------------- 531
N+F+ +GKG G V + + +G +A+K
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 532 KFHSPLPDNFCSHPRQSFIVYEYLESGSL------DKILNNDASAKELGWTQRLNVIKGV 585
F + L +F +H R F++ EY G L +++ + D A+ G +
Sbjct: 70 PFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSED-RARFYGAE--------I 119
Query: 586 ADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN 645
AL YLH+ +V+ D+ +N++LD ++DF + K D + GT
Sbjct: 120 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEY 177
Query: 646 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+APE+ D + GV+ E++ G+ P
Sbjct: 178 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 85/213 (39%), Gaps = 47/213 (22%)
Query: 501 NDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVK---------------------------- 531
N+F+ +GKG G V + + +G +A+K
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 532 KFHSPLPDNFCSHPRQSFIVYEYLESGSL------DKILNNDASAKELGWTQRLNVIKGV 585
F + L +F +H R F++ EY G L +++ + D A+ G +
Sbjct: 69 PFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSED-RARFYGAE--------I 118
Query: 586 ADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN 645
AL YLH+ +V+ D+ +N++LD ++DF + K D + GT
Sbjct: 119 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEY 176
Query: 646 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+APE+ D + GV+ E++ G+ P
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 26/166 (15%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGY---EAHVSDFRIAKFLNLDSSN 635
+ +IK + + ++YLH N IVH D+ +N+LL Y + + DF +++ + +
Sbjct: 134 IRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG-HACE 189
Query: 636 WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDXXXXXXXXXXXXXXX 695
++ GT +APE+ +T D+++ G++A ++ P
Sbjct: 190 LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP------------FVGED 237
Query: 696 XXDSRLPYPSLDV---QNKFMSIMQVAF----SCLDQNPVSRPTMK 734
++ L ++V + F S+ Q+A S L +NP RPT +
Sbjct: 238 NQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAE 283
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 77/197 (39%), Gaps = 36/197 (18%)
Query: 509 IGKGGHGSVYIAR-VPSGEIFAVKKFHSPLPDNF-------------------------- 541
+G+G +G V R +G I A+KKF D
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 542 CSHPRQSFIVYEYLESGSLDKI-LNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 600
C ++ ++V+E+++ LD + L + ++ +I G+ + HN I
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIG--FCHSHN-----I 145
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAY-TMKVTEK 659
+H DI +N+L+ + DF A+ L + T APEL +K +
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKA 205
Query: 660 CDVYSFGVLALEVIKGK 676
DV++ G L E+ G+
Sbjct: 206 VDVWAIGCLVTEMFMGE 222
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 127 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 239
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 240 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 289
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 232
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 233 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 282
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 122 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 234
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 235 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 284
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 123 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 235
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 236 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 285
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 123 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 235
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 236 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 285
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 30/205 (14%)
Query: 501 NDFDAKHCIGKGGHGSVYIARVPSG----EIFAVK-----------KFHSPLPDNFCSHP 545
+ F+ +G+G G V++ + SG +++A+K + + + +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 546 RQSFIV---YEYLESGSLDKILNN-------DASAKELGWTQR--LNVIKGVADALFYLH 593
FIV Y + G L IL+ +KE+ +T+ + +A AL +LH
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 594 NNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT 653
+ I++ D+ +N+LLD ++DF ++K GT +APE+
Sbjct: 144 SLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 654 MKVTEKCDVYSFGVLALEVIKGKHP 678
T+ D +SFGVL E++ G P
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 121 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 178 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 233
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 234 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 283
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 47/216 (21%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSP-----LP-------------- 538
AT+ ++ IG G +G+VY AR P SG A+K P LP
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 539 ----------DNFCSHPR-----QSFIVYEYLESG---SLDKILNNDASAKELGWTQRLN 580
+ C+ R + +V+E+++ LDK A+ + +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK-----D 116
Query: 581 VIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLA 640
+++ L +LH NC IVH D+ +N+L+ G ++DF +A+ + + +
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LDPVV 172
Query: 641 GTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 676
T APE+ D++S G + E+ + K
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 154 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 210
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 211 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 266
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 267 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 316
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 123 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 235
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 236 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 285
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 36/208 (17%)
Query: 501 NDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVK---------------KFHSPLPDNFCSH 544
NDF IG+GG G VY R +G+++A+K + + + S
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 545 PRQSFIV---YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFY---------- 591
FIV Y + L IL+ + +L + + + AD FY
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDL-MNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 592 LHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE-L 650
+HN +V+ D+ N+LLD +SD +A + + S GTHG +APE L
Sbjct: 308 MHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVL 362
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ D +S G + ++++G P
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 124 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 180
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 181 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 236
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 237 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 286
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 232
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 233 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 282
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 28/197 (14%)
Query: 236 LCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEI 295
LC + A+P I + LLD+ N I E P L+ L+L+ N +
Sbjct: 17 LCHRKRFVAVPEGIP----TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIV---- 68
Query: 296 PTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYY 355
S PG +L NL L L +N L L L L
Sbjct: 69 --------------------SAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTK 108
Query: 356 LNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLI 415
L++S NK+ + +L +L L++ N L + SLE+L L NL+ +
Sbjct: 109 LDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP 168
Query: 416 PRCFEELHGLLHIDISY 432
LHGL+ + + +
Sbjct: 169 TEALSHLHGLIVLRLRH 185
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 28/261 (10%)
Query: 200 SLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSL 259
++F +L L L N S P NL +L + L N+L IPL + G L+
Sbjct: 51 EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTG-LSNLTK 108
Query: 260 LDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRI 319
LD+S N I + + + L+ L++ N +V + L +++L L+ I
Sbjct: 109 LDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS-I 167
Query: 320 PGE----LGSLINLEYLDLSANHLSNFVLESLGSL---------------------VKLY 354
P E L LI L L+ N + ++ + L L + L
Sbjct: 168 PTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLT 227
Query: 355 YLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGL 414
L+++H L+ + + +L++L L+LS+N + S + + L+++ L L+ +
Sbjct: 228 SLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVV 287
Query: 415 IPRCFEELHGLLHIDISYNKL 435
P F L+ L +++S N+L
Sbjct: 288 EPYAFRGLNYLRVLNVSGNQL 308
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 111/282 (39%), Gaps = 29/282 (10%)
Query: 99 TLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXX 158
TL + F+SFPHL L+L N + + P +NL L L +N+L
Sbjct: 46 TLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSN 105
Query: 159 XXXXXXXRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFS 218
N++ + + L L L + N L R+ S +L L L + +
Sbjct: 106 LTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT 165
Query: 219 GSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVS----INNITGN---- 270
+ + +L L ++L LN + R +L +L++S ++ +T N
Sbjct: 166 SIPTEALSHLHGLIVLRL--RHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYG 223
Query: 271 ---------------IPF-EIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNK 314
+P+ + L++L+LS N I + L ++ L I L G +
Sbjct: 224 LNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQ 283
Query: 315 LSGRIPGELGSLINLEYLDLSANHLSNF---VLESLGSLVKL 353
L+ P L L L++S N L+ V S+G+L L
Sbjct: 284 LAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETL 325
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 40/98 (40%)
Query: 338 HLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICR 397
H FV G + L+L N++ E + HL EL+L+ N +
Sbjct: 19 HRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNN 78
Query: 398 MESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKL 435
+ +L L L N L + F L L +DIS NK+
Sbjct: 79 LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKI 116
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 121 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 178 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 233
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 234 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 283
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 84/215 (39%), Gaps = 46/215 (21%)
Query: 501 NDFDAKHCIGKGGHGSVYIARVP-------------------------SGEIFAVKKF-H 534
ND + IG+G G V AR+ +GE+ + K H
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 535 SPLPDNF---CSHPRQSFIVYEYLESGSL------DKILNND-------ASAKELGWTQR 578
P N C H ++ EY G+L ++L D ++A L Q
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
L+ VA + YL F +H D++++N+L+ Y A ++DF +++ +
Sbjct: 145 LHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 201
Query: 639 LAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVI 673
L Y++ T DV+S+GVL E++
Sbjct: 202 RLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 235
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 232
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 233 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 282
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 232
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 233 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 282
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Query: 260 LDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRI 319
LD+S N + + P+LQ LDLS I ++ +L+ + L+GN +
Sbjct: 34 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 93
Query: 320 PGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKL-SQQIPIELDNLIHLS 378
G L +L+ L +L++ +G L L LN++HN + S ++P NL +L
Sbjct: 94 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 153
Query: 379 ELDLSHNFLGEKISSRIC 396
LDLS N KI S C
Sbjct: 154 HLDLSSN----KIQSIYC 167
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 50/219 (22%)
Query: 499 ATNDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSP--------LP----------- 538
AT+ ++ IG G +G+VY AR P SG A+K P LP
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 539 -------------DNFCSHPR-----QSFIVYEYLESG---SLDKILNNDASAKELGWTQ 577
+ C+ R + +V+E+++ LDK A+ +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK--- 123
Query: 578 RLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS 637
++++ L +LH NC IVH D+ +N+L+ G ++DF +A+ + + +
Sbjct: 124 --DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LT 177
Query: 638 KLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 676
+ T APE+ D++S G + E+ + K
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 85/213 (39%), Gaps = 47/213 (22%)
Query: 501 NDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVK---------------------------- 531
N+F+ +GKG G V + + +G +A+K
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 532 KFHSPLPDNFCSHPRQSFIVYEYLESGSL------DKILNNDASAKELGWTQRLNVIKGV 585
F + L +F +H R F++ EY G L +++ + D A+ G +
Sbjct: 211 PFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSED-RARFYG--------AEI 260
Query: 586 ADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN 645
AL YLH+ +V+ D+ +N++LD ++DF + K D + GT
Sbjct: 261 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEY 318
Query: 646 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+APE+ D + GV+ E++ G+ P
Sbjct: 319 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Query: 260 LDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRI 319
LD+S N + + P+LQ LDLS I ++ +L+ + L+GN +
Sbjct: 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 92
Query: 320 PGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKL-SQQIPIELDNLIHLS 378
G L +L+ L +L++ +G L L LN++HN + S ++P NL +L
Sbjct: 93 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 152
Query: 379 ELDLSHNFLGEKISSRIC 396
LDLS N KI S C
Sbjct: 153 HLDLSSN----KIQSIYC 166
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 99/242 (40%), Gaps = 31/242 (12%)
Query: 179 QLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNN--SFSGSIPQQIGNLKSLFDMKL 236
+L L L SN G + S + +L FL L N SF G Q SL + L
Sbjct: 323 KLKSLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDL 380
Query: 237 CINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIP 296
NG I +S ++ QL LD +N+ F + S
Sbjct: 381 ---SFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLS------------------ 419
Query: 297 TQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLS-NFVLESLGSLVKLYY 355
L N+IYL+ IS + +++ G L +LE L ++ N NF+ + L L +
Sbjct: 420 --LRNLIYLD-ISHTHTRVA--FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474
Query: 356 LNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLI 415
L+LS +L Q P ++L L L+++ N L R+ SL+K+ L N
Sbjct: 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534
Query: 416 PR 417
PR
Sbjct: 535 PR 536
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 5/190 (2%)
Query: 255 PQLSLLDVSINNIT--GNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSG 312
P L LD+S N ++ G + L+YLDLS N ++ LG + L +
Sbjct: 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLG-LEQLEHLDFQH 405
Query: 313 NKLSGRIPGELG-SLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQ-IPIE 370
+ L + SL NL YLD+S H L L L ++ N + +P
Sbjct: 406 SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 465
Query: 371 LDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDI 430
L +L+ LDLS L + + + SL+ LN++ N L + F+ L L I +
Sbjct: 466 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWL 525
Query: 431 SYNKLEGHIP 440
N + P
Sbjct: 526 HTNPWDCSCP 535
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Query: 260 LDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRI 319
LD+S N + + P+LQ LDLS I ++ +L+ + L+GN +
Sbjct: 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 92
Query: 320 PGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKL-SQQIPIELDNLIHLS 378
G L +L+ L +L++ +G L L LN++HN + S ++P NL +L
Sbjct: 93 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 152
Query: 379 ELDLSHNFLGEKISSRIC 396
LDLS N KI S C
Sbjct: 153 HLDLSSN----KIQSIYC 166
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 126 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 182
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 183 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 238
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 239 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 288
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 36/208 (17%)
Query: 501 NDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVK---------------KFHSPLPDNFCSH 544
NDF IG+GG G VY R +G+++A+K + + + S
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 545 PRQSFIV---YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFY---------- 591
FIV Y + L IL+ + +L + + + AD FY
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDL-MNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 306
Query: 592 LHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE-L 650
+HN +V+ D+ N+LLD +SD +A + + S GTHG +APE L
Sbjct: 307 MHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVL 361
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ D +S G + ++++G P
Sbjct: 362 QKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 36/208 (17%)
Query: 501 NDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVK---------------KFHSPLPDNFCSH 544
NDF IG+GG G VY R +G+++A+K + + + S
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 545 PRQSFIV---YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFY---------- 591
FIV Y + L IL+ + +L + + + AD FY
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDL-MNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 592 LHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE-L 650
+HN +V+ D+ N+LLD +SD +A + + S GTHG +APE L
Sbjct: 308 MHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVL 362
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ D +S G + ++++G P
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 36/208 (17%)
Query: 501 NDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVK---------------KFHSPLPDNFCSH 544
NDF IG+GG G VY R +G+++A+K + + + S
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 545 PRQSFIV---YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFY---------- 591
FIV Y + L IL+ + +L + + + AD FY
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDL-MNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 592 LHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE-L 650
+HN +V+ D+ N+LLD +SD +A + + S GTHG +APE L
Sbjct: 308 MHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVL 362
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ D +S G + ++++G P
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 145 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 201
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 202 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 257
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 258 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 307
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 114 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 170
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 171 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 226
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 227 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 276
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 232
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M IM+ C + SRP + ++ + +P
Sbjct: 233 EKGERLPQPPICTIDVYM-IMR---KCWMIDADSRPKFRELIIEFSKMARDPQR 282
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 92/229 (40%), Gaps = 45/229 (19%)
Query: 486 PLLGKIVYEEIIRATNDFDAKHCIGKGGHGSVYIARVPSGE-IFAVKKFHS----PLPDN 540
P K+ + R DF+ IG+G G V + ++ + + +FA+K + +
Sbjct: 61 PFTSKVKQMRLHR--EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAET 118
Query: 541 FCSHPRQS-----------------------FIVYEYLESGSLDKILNN--DASAKELGW 575
C + ++V +Y G L +L+ D +E+
Sbjct: 119 ACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMAR 178
Query: 576 TQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN 635
++ + D++ LH VH DI N+L+D+ ++DF L D +
Sbjct: 179 FYLAEMVIAI-DSVHQLH------YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV 231
Query: 636 WSKLA-GTHGNVAPELAYTM-----KVTEKCDVYSFGVLALEVIKGKHP 678
S +A GT ++PE+ M + +CD +S GV E++ G+ P
Sbjct: 232 QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 85/213 (39%), Gaps = 47/213 (22%)
Query: 501 NDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVK---------------------------- 531
N+F+ +GKG G V + + +G +A+K
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 532 KFHSPLPDNFCSHPRQSFIVYEYLESGSL------DKILNNDASAKELGWTQRLNVIKGV 585
F + L +F +H R F++ EY G L +++ + D A+ G +
Sbjct: 208 PFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSED-RARFYG--------AEI 257
Query: 586 ADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN 645
AL YLH+ +V+ D+ +N++LD ++DF + K D + GT
Sbjct: 258 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEY 315
Query: 646 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+APE+ D + GV+ E++ G+ P
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Query: 260 LDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRI 319
LD+S N + + P+LQ LDLS I ++ +L+ + L+GN +
Sbjct: 57 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 116
Query: 320 PGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKL-SQQIPIELDNLIHLS 378
G L +L+ L +L++ +G L L LN++HN + S ++P NL +L
Sbjct: 117 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 176
Query: 379 ELDLSHNFLGEKISSRIC 396
LDLS N KI S C
Sbjct: 177 HLDLSSN----KIQSIYC 190
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 94/239 (39%), Gaps = 10/239 (4%)
Query: 179 QLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNN--SFSGSIPQQIGNLKSLFDMKL 236
+L L L SN G + S + +L FL L N SF G Q SL + L
Sbjct: 347 KLKSLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDL 404
Query: 237 CINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQ-LQYLDLSSNYIVGEI 295
NG I +S ++ QL LD +N+ F + S + L YLD+S +
Sbjct: 405 ---SFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF 461
Query: 296 PTQLGNIIYLNRISLSGNKLSGR-IPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLY 354
+ L + ++GN +P L NL +LDLS L + SL L
Sbjct: 462 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 521
Query: 355 YLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRM-ESLEKLNLSYNNLS 412
LN+SHN L L LD S N + + SL LNL+ N+ +
Sbjct: 522 VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 86/202 (42%), Gaps = 12/202 (5%)
Query: 255 PQLSLLDVSINNIT--GNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSG 312
P L LD+S N ++ G + L+YLDLS N ++ LG + L +
Sbjct: 371 PSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLG-LEQLEHLDFQH 429
Query: 313 NKLSGRIPGELG-SLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQ-IPIE 370
+ L + SL NL YLD+S H L L L ++ N + +P
Sbjct: 430 SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 489
Query: 371 LDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGL--IP-RCFEEL----H 423
L +L+ LDLS L + + + SL+ LN+S+NN L P +C L +
Sbjct: 490 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDY 549
Query: 424 GLLHIDISYNKLEGHIPNSTTF 445
L HI S + H P+S F
Sbjct: 550 SLNHIMTSKKQELQHFPSSLAF 571
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 92/256 (35%), Gaps = 48/256 (18%)
Query: 509 IGKGGHGSVYIARVPS-GEIFAVKKFHSPLPDNF-------------------------C 542
IG+G G V+ R+ + + AVK LP + C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 543 SHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVH 602
+ + +IV E ++ G L + + L L ++ A + YL + C +H
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESKC---CIH 236
Query: 603 WDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-----APELAYTMKVT 657
D++++N L+ +SDF +++ ++ +G V APE + +
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSR---EEADGVYAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 658 EKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIM 716
+ DV+SFG+L E G P RLP P L F +
Sbjct: 294 SESDVWSFGILLWETFSLGASP----YPNLSNQQTREFVEKGGRLPCPELCPDAVFRLME 349
Query: 717 QVAFSCLDQNPVSRPT 732
Q C P RP+
Sbjct: 350 Q----CWAYEPGQRPS 361
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 580 NVIKGVADALFYLHNNCFPPIVHWDISSKNVLLD---LGYEAHVSDFRIAKFLNLDSSNW 636
+ I+ + +++ Y H+N IVH ++ +N+LL G ++DF +A +N DS W
Sbjct: 132 HCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAW 187
Query: 637 SKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
AGT G ++PE+ ++ D+++ GV+ ++ G P
Sbjct: 188 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 94/228 (41%), Gaps = 61/228 (26%)
Query: 501 NDFDAKHCIGKGGHGSVYIARVP--------------------SGEIFAVKKFHSPLPDN 540
N+ + IG+G G V+ AR P S ++ A + + L
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 541 F-----------CSHPRQSFIVYEYLESGSLDKIL------------NNDASAKE----- 572
F C+ + +++EY+ G L++ L ++D S +
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 573 ----LGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKF 628
L ++L + + VA + YL F VH D++++N L+ ++DF +++
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSERKF---VHRDLATRNCLVGENMVVKIADFGLSR- 222
Query: 629 LNLDSSNWSKLAGTHG----NVAPELAYTMKVTEKCDVYSFGVLALEV 672
N+ S+++ K G + PE + + T + DV+++GV+ E+
Sbjct: 223 -NIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
+V EY+ GSL L + +G Q L + + + + YLH + +H +++++N
Sbjct: 95 LVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQHY---IHRNLAARN 147
Query: 610 VLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSFG 666
VLLD + DF +AK + + V APE K DV+SFG
Sbjct: 148 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFG 207
Query: 667 VLALEVI 673
V E++
Sbjct: 208 VTLYELL 214
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 9/182 (4%)
Query: 185 HLILDSNFLGGSIPRSL-SNFTNLVFLYLYNN--SFSGSIPQQIGNLKSLFDMKLCINQL 241
L L+SN L S+P + T L L L +N SF G Q SL + L
Sbjct: 32 RLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL---SF 87
Query: 242 NGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQ-LQYLDLSSNYIVGEIPTQLG 300
NG I +S ++ QL LD +N+ F + S + L YLD+S +
Sbjct: 88 NGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN 147
Query: 301 NIIYLNRISLSGNKLSGR-IPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLS 359
+ L + ++GN +P L NL +LDLS L + SL L LN+S
Sbjct: 148 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMS 207
Query: 360 HN 361
HN
Sbjct: 208 HN 209
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 67/166 (40%), Gaps = 33/166 (19%)
Query: 307 RISLSGNKLSGRIPGELGSLINLEYLDLSANHL--------SNFVLESLG---------- 348
R+ L NKL G L L L LS+N L S+F SL
Sbjct: 32 RLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI 91
Query: 349 -------SLVKLYYLNLSHNKLSQ----QIPIELDNLIHLSELDLSHNFLGEKISSRICR 397
L +L +L+ H+ L Q + + L NLI+ LD+SH +
Sbjct: 92 TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY---LDISHTHTRVAFNGIFNG 148
Query: 398 MESLEKLNLSYNNLS-GLIPRCFEELHGLLHIDISYNKLEGHIPNS 442
+ SLE L ++ N+ +P F EL L +D+S +LE P +
Sbjct: 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 194
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 88/206 (42%), Gaps = 12/206 (5%)
Query: 251 WGRCPQLSLLDVSINNIT--GNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRI 308
+ + QL+ L +S N ++ G + L+YLDLS N ++ LG + L +
Sbjct: 48 FDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLG-LEQLEHL 106
Query: 309 SLSGNKLSGRIPGELG-SLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQ- 366
+ L + SL NL YLD+S H L L L ++ N +
Sbjct: 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF 166
Query: 367 IPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGL--IP-RCFEEL- 422
+P L +L+ LDLS L + + + SL+ LN+S+NN L P +C L
Sbjct: 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 226
Query: 423 ---HGLLHIDISYNKLEGHIPNSTTF 445
+ L HI S + H P+S F
Sbjct: 227 VLDYSLNHIMTSKKQELQHFPSSLAF 252
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Query: 540 NFCSHPRQSFIVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 598
+F R ++V E + G L D+I++ + +IK V + YLH +
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEIIHR----MKFNEVDAAVIIKQVLSGVTYLHKH--- 155
Query: 599 PIVHWDISSKNVLLDLGYEA---HVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMK 655
IVH D+ +N+LL+ + + DF ++ +L GT +APE+ K
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL-GTAYYIAPEV-LRKK 213
Query: 656 VTEKCDVYSFGVLALEVIKGKHP 678
EKCDV+S GV+ ++ G P
Sbjct: 214 YDEKCDVWSIGVILFILLAGYPP 236
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Query: 260 LDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRI 319
LD+S N + + P+LQ LDLS I ++ +L+ + L+GN +
Sbjct: 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 92
Query: 320 PGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKL-SQQIPIELDNLIHLS 378
G L +L+ L +L++ +G L L LN++HN + S ++P NL +L
Sbjct: 93 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 152
Query: 379 ELDLSHNFLGEKISSRIC 396
LDLS N KI S C
Sbjct: 153 HLDLSSN----KIQSIYC 166
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 94/239 (39%), Gaps = 10/239 (4%)
Query: 179 QLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNN--SFSGSIPQQIGNLKSLFDMKL 236
+L L L SN G + S + +L FL L N SF G Q SL + L
Sbjct: 323 KLKSLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDL 380
Query: 237 CINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQ-LQYLDLSSNYIVGEI 295
NG I +S ++ QL LD +N+ F + S + L YLD+S +
Sbjct: 381 ---SFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF 437
Query: 296 PTQLGNIIYLNRISLSGNKLSGR-IPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLY 354
+ L + ++GN +P L NL +LDLS L + SL L
Sbjct: 438 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 497
Query: 355 YLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRM-ESLEKLNLSYNNLS 412
LN+SHN L L LD S N + + SL LNL+ N+ +
Sbjct: 498 VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 556
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 86/202 (42%), Gaps = 12/202 (5%)
Query: 255 PQLSLLDVSINNIT--GNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSG 312
P L LD+S N ++ G + L+YLDLS N ++ LG + L +
Sbjct: 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLG-LEQLEHLDFQH 405
Query: 313 NKLSGRIPGELG-SLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQ-IPIE 370
+ L + SL NL YLD+S H L L L ++ N + +P
Sbjct: 406 SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 465
Query: 371 LDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGL--IP-RCFEEL----H 423
L +L+ LDLS L + + + SL+ LN+S+NN L P +C L +
Sbjct: 466 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDY 525
Query: 424 GLLHIDISYNKLEGHIPNSTTF 445
L HI S + H P+S F
Sbjct: 526 SLNHIMTSKKQELQHFPSSLAF 547
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 509 IGKGGHGSVYIARVPSGEIFAVKKFHSPLPDNFCS--------------HP--------- 545
+G+G +G VY A+ G I A+K+ D HP
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 546 ---RQSFIVYEYLESGSLDKILNNDASAKELGWTQ--RLNVIKGVADALFYLHNNCFPPI 600
R +V+E++E L K+L+ + + + + +++GVA + H + I
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVA----HCHQH---RI 140
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE-LAYTMKVTEK 659
+H D+ +N+L++ ++DF +A+ + +++ T AP+ L + K +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 660 CDVYSFGVLALEVIKGK 676
D++S G + E+I GK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Query: 260 LDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRI 319
LD+S N + + P+LQ LDLS I ++ +L+ + L+GN +
Sbjct: 34 LDLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 93
Query: 320 PGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKL-SQQIPIELDNLIHLS 378
G L +L+ L +L++ +G L L LN++HN + S ++P NL +L
Sbjct: 94 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 153
Query: 379 ELDLSHNFLGEKISSRIC 396
LDLS N KI S C
Sbjct: 154 HLDLSSN----KIQSIYC 167
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 509 IGKGGHGSVYIARVPSGEIFAVKKFHSPLPDNFCS--------------HP--------- 545
+G+G +G VY A+ G I A+K+ D HP
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 546 ---RQSFIVYEYLESGSLDKILNNDASAKELGWTQ--RLNVIKGVADALFYLHNNCFPPI 600
R +V+E++E L K+L+ + + + + +++GVA + H + I
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVA----HCHQH---RI 140
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE-LAYTMKVTEK 659
+H D+ +N+L++ ++DF +A+ + +++ T AP+ L + K +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 660 CDVYSFGVLALEVIKGK 676
D++S G + E+I GK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 123 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 235
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M IM+ C + SRP + ++ + +P
Sbjct: 236 EKGERLPQPPICTIDVYM-IMR---KCWMIDADSRPKFRELIIEFSKMARDPQR 285
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Query: 260 LDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRI 319
LD+S N + + P+LQ LDLS I ++ +L+ + L+GN +
Sbjct: 35 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 94
Query: 320 PGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKL-SQQIPIELDNLIHLS 378
G L +L+ L +L++ +G L L LN++HN + S ++P NL +L
Sbjct: 95 LGAFSGLSSLQKLVALETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 154
Query: 379 ELDLSHNFLGEKISSRIC 396
LDLS N KI S C
Sbjct: 155 HLDLSSN----KIQSIYC 168
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 580 NVIKGVADALFYLHNNCFPPIVHWDISSKNVLLD---LGYEAHVSDFRIAKFLNLDSSNW 636
+ I+ + +++ Y H+N IVH ++ +N+LL G ++DF +A +N DS W
Sbjct: 109 HCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAW 164
Query: 637 SKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
AGT G ++PE+ ++ D+++ GV+ ++ G P
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 187 ILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIP 246
I D+ F+ P S S+FT FL N F+ S+ Q LK L + L N L
Sbjct: 338 ISDTPFIHMVCPPSPSSFT---FLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFK 394
Query: 247 LSIDWGRCPQLSLLDVSINNITGNI-PFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYL 305
+++ L LDVS+N++ + + + L+LSSN + G + L + +
Sbjct: 395 VALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKV 454
Query: 306 NRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQ 365
+ L N++ IP ++ L L+ L++++N L + L L Y+ L N
Sbjct: 455 --LDLHNNRIMS-IPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 511
Query: 366 QIP 368
P
Sbjct: 512 TCP 514
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 332 LDLSANHLSNFVLESLGSLVKLYYLNLSHNKL-SQQIPIELDNLIHLSELDLSHNFLGEK 390
L LS N +S + + L +L L LSHN++ S + L N L LD+SHN L +
Sbjct: 57 LSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQ-DLEYLDVSHNRL-QN 114
Query: 391 ISSRICRMESLEKLNLSYNNLSGLIPRCFE 420
IS C M SL L+LS+N+ ++P C E
Sbjct: 115 ISC--CPMASLRHLDLSFNDF-DVLPVCKE 141
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 283 YLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSG--RIPGELGSLINLEYLDLSANHLS 340
+L+ + N + + L + L N L ++ ++ +LE LD+S N L+
Sbjct: 357 FLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLN 416
Query: 341 NFVLESLGSLVK-LYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRME 399
+ + + + + LNLS N L+ + L + + LDL HN I + ++
Sbjct: 417 SHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKV--LDL-HNNRIMSIPKDVTHLQ 473
Query: 400 SLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIP 440
+L++LN++ N L + F+ L L +I + N + P
Sbjct: 474 ALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 9/128 (7%)
Query: 258 SLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSG 317
S++D S N+T ++P ++ P+ + L LS N I + + L + LS N++
Sbjct: 34 SMVDYSNRNLT-HVPKDL--PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRS 90
Query: 318 RIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPI--ELDNLI 375
+LEYLD+S N L N S + L +L+LS N +P+ E NL
Sbjct: 91 LDFHVFLFNQDLEYLDVSHNRLQNI---SCCPMASLRHLDLSFNDF-DVLPVCKEFGNLT 146
Query: 376 HLSELDLS 383
L+ L LS
Sbjct: 147 KLTFLGLS 154
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Query: 260 LDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRI 319
LD+S N + + P+LQ LDLS I ++ +L+ + L+GN +
Sbjct: 35 LDLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 94
Query: 320 PGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKL-SQQIPIELDNLIHLS 378
G L +L+ L +L++ +G L L LN++HN + S ++P NL +L
Sbjct: 95 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 154
Query: 379 ELDLSHNFLGEKISSRIC 396
LDLS N KI S C
Sbjct: 155 HLDLSSN----KIQSIYC 168
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 580 NVIKGVADALFYLHNNCFPPIVHWDISSKNVLLD---LGYEAHVSDFRIAKFLNLDSSNW 636
+ I+ + +++ Y H+N IVH ++ +N+LL G ++DF +A +N DS W
Sbjct: 109 HCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAW 164
Query: 637 SKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
AGT G ++PE+ ++ D+++ GV+ ++ G P
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF +AK L + +
Sbjct: 130 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 186
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 187 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 242
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M IM+ C + SRP + ++ + +P
Sbjct: 243 EKGERLPQPPICTIDVYM-IMR---KCWMIDADSRPKFRELIIEFSKMARDPQR 292
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 580 NVIKGVADALFYLHNNCFPPIVHWDISSKNVLLD---LGYEAHVSDFRIAKFLNLDSSNW 636
+ I+ + +++ Y H+N IVH ++ +N+LL G ++DF +A +N DS W
Sbjct: 108 HCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAW 163
Query: 637 SKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
AGT G ++PE+ ++ D+++ GV+ ++ G P
Sbjct: 164 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 14/139 (10%)
Query: 546 RQSFIVYEYLESGSL-DKILNNDA-SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHW 603
+ ++V E + G L DKIL S +E + V+ + + YLH+ +VH
Sbjct: 94 KHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLHSQG---VVHR 145
Query: 604 DISSKNVLL--DLGYEA--HVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
D+ N+L + G + DF AK L ++ T VAPE+ E
Sbjct: 146 DLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEG 205
Query: 660 CDVYSFGVLALEVIKGKHP 678
CD++S G+L ++ G P
Sbjct: 206 CDIWSLGILLYTMLAGYTP 224
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 137/345 (39%), Gaps = 51/345 (14%)
Query: 104 SFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSE--XXXXXXXXX 161
+F + P+L LDL +++++ + P L L L LS + +
Sbjct: 68 AFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTR 127
Query: 162 XXXXRNQLNGSIPH-EVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGS 220
+NQ+ H G+LN L + SN + L
Sbjct: 128 LDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELE------------------ 169
Query: 221 IPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQ------LSLLDVSIN----NITGN 270
P Q G S F L N L + S+DWG+C L +LDVS N +ITGN
Sbjct: 170 -PLQ-GKTLSFF--SLAANSLYSRV--SVDWGKCMNPFRNMVLEILDVSGNGWTVDITGN 223
Query: 271 IPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLE 330
I +S + +++I+G + N N +G ++
Sbjct: 224 FSNAISKSQAFSL--ILAHHIMG------AGFGFHNIKDPDQNTFAGLARS------SVR 269
Query: 331 YLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEK 390
+LDLS + + +L L LNL++NK+++ L +L L+LS+N LGE
Sbjct: 270 HLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGEL 329
Query: 391 ISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKL 435
SS + + ++L N+++ + + F+ L L +D+ N L
Sbjct: 330 YSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNAL 374
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 110/279 (39%), Gaps = 49/279 (17%)
Query: 93 SISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSG--HIP 150
S +L G L +F P +AY+DL N + I L KL+ LD N L+ IP
Sbjct: 322 SYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIP 381
Query: 151 SEXXXXXXXXXXXXXRNQLNGSIPHEVGQLNFLNHLI-LDSNFLGG-SIPRSLSNFTNLV 208
S L+G+ + ++N +LI L N L I L +L
Sbjct: 382 SIPDIF------------LSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQ 429
Query: 209 FLYLYNNSFSG----SIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSI 264
L L N FS P + +L+ LF L N L A + W LS
Sbjct: 430 ILILNQNRFSSCSGDQTPSENPSLEQLF---LGENMLQLAWETELCWDVFEGLS------ 480
Query: 265 NNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELG 324
LQ L L+ NY+ P ++ L +SL+ N+L+ +L
Sbjct: 481 ---------------HLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP 525
Query: 325 SLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKL 363
+ NLE LD+S N L + + V L L+++HNK
Sbjct: 526 A--NLEILDISRNQL---LAPNPDVFVSLSVLDITHNKF 559
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 100/250 (40%), Gaps = 70/250 (28%)
Query: 255 PQLSLLDVSINNIT--GNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSG 312
P+++ +D+ N+I + F+ E +LQ LDL N + T + I + I LSG
Sbjct: 338 PKVAYIDLQKNHIAIIQDQTFKFLE--KLQTLDLRDNAL-----TTIHFIPSIPDIFLSG 390
Query: 313 NKLSGRIPGELGSLINLEYLDLSAN--HLSNFVLESLGSLV------KLYYLNLSHNKLS 364
NKL + L ++L+AN HLS LE+L L L L L+ N+ S
Sbjct: 391 NKL-----------VTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFS 439
Query: 365 ----QQIPIE--------------------------LDNLIHLSELDLSHNFLGEKISSR 394
Q P E + L HL L L+HN+L
Sbjct: 440 SCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGV 499
Query: 395 ICRMESLEKLNLSYNNLSGL----IPRCFEELHGLLHIDISYNKLEGHIPNSTTFRDAPL 450
+ +L L+L+ N L+ L +P E L DIS N+L PN F +
Sbjct: 500 FSHLTALRGLSLNSNRLTVLSHNDLPANLEIL------DISRNQLLA--PNPDVFVSLSV 551
Query: 451 EALQGNKGLC 460
+ NK +C
Sbjct: 552 LDITHNKFIC 561
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 56/226 (24%)
Query: 490 KIVYEEIIRATNDFDAKHCIGKGGHGSVYIA-RVPSGEIFAVKK---FHSPL-------- 537
+IVY ++DF K +G+G +G V A P+GEI A+KK F PL
Sbjct: 4 RIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLRE 59
Query: 538 --------------------PDNFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQ 577
PD+F + + +I+ E +++ L+ S + L
Sbjct: 60 IKILKHFKHENIITIFNIQRPDSFENF-NEVYIIQELMQTD-----LHRVISTQMLSDDH 113
Query: 578 RLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS 637
I A+ LH + ++H D+ N+L++ + V DF +A+ ++ +++ S
Sbjct: 114 IQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 638 KLAGTHGNV----------APELAYT-MKVTEKCDVYSFGVLALEV 672
+ G + APE+ T K + DV+S G + E+
Sbjct: 171 EPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 549 FIVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
++V E G L D+I+ S K +I+ V + Y+H N IVH D+
Sbjct: 108 YLVGEVYTGGELFDEII----SRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKP 160
Query: 608 KNVLLDLGYE---AHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYS 664
+N+LL+ + + DF ++ K+ GT +APE+ + EKCDV+S
Sbjct: 161 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI-GTAYYIAPEVLHGT-YDEKCDVWS 218
Query: 665 FGVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 219 TGVILYILLSGCPP 232
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 10/276 (3%)
Query: 173 IPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQ-IGNLKSL 231
+P + L+ L L+L +N S SNF +L L + N+ + + NL++L
Sbjct: 293 LPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENL 352
Query: 232 FDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLS-SNY 290
++ L + + + ++ L L++S N E PQL+ LDL+ +
Sbjct: 353 RELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRL 412
Query: 291 IVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLE---SL 347
V + + N+ L ++LS + L L L++L+L NH ++ SL
Sbjct: 413 KVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSL 472
Query: 348 GSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEK--LN 405
+L +L L LS LS +L ++ +DLSHN L SS I + L+ LN
Sbjct: 473 QTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRL---TSSSIEALSHLKGIYLN 529
Query: 406 LSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPN 441
L+ N++S ++P L I++ N L+ N
Sbjct: 530 LASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 16/194 (8%)
Query: 281 LQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSAN--- 337
LQ LDL++ ++ E+P+ L + L ++ LS NK + +L +L + N
Sbjct: 280 LQELDLTATHL-SELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKR 338
Query: 338 -HLSNFVLESLGSLVKLYYLNLSHNKL--SQQIPIELDNLIHLSELDLSHNFLGEKISSR 394
L LE+L +L + L+LSH+ + S ++L NL HL L+LS+N +
Sbjct: 339 LELGTGCLENLENLRE---LDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEA 395
Query: 395 ICRMESLEKLNLSYNNLSGLIPRC-FEELHGLLHIDISYNKLEGHIPNSTTFRDAPLEA- 452
LE L+L++ L + F+ LH L +++S++ L+ I + F P
Sbjct: 396 FKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLD--ISSEQLFDGLPALQH 453
Query: 453 --LQGNKGLCGDIR 464
LQGN G+I+
Sbjct: 454 LNLQGNHFPKGNIQ 467
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 56/226 (24%)
Query: 490 KIVYEEIIRATNDFDAKHCIGKGGHGSVYIA-RVPSGEIFAVKK---FHSPL-------- 537
+IVY ++DF K +G+G +G V A P+GEI A+KK F PL
Sbjct: 4 RIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLRE 59
Query: 538 --------------------PDNFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQ 577
PD+F + + +I+ E +++ L+ S + L
Sbjct: 60 IKILKHFKHENIITIFNIQRPDSFENF-NEVYIIQELMQTD-----LHRVISTQMLSDDH 113
Query: 578 RLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS 637
I A+ LH + ++H D+ N+L++ + V DF +A+ ++ +++ S
Sbjct: 114 IQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 638 KLAGTHGNV----------APELAYT-MKVTEKCDVYSFGVLALEV 672
+ G + APE+ T K + DV+S G + E+
Sbjct: 171 EPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 45/200 (22%)
Query: 509 IGKGGHGSVYIARVPSGEIFAVKKFHSPLPD--------------------------NFC 542
IG+G +G VY A+ GE FA+KK D +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 543 SHPRQSFIVYEYLESGSLDKILN------NDASAKELGWTQRLNVIKGVADALFYLHNNC 596
++ +V+E+L+ L K+L+ +AK L ++ G+A Y H+
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSF----LLQLLNGIA----YCHDR- 119
Query: 597 FPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE-LAYTMK 655
++H D+ +N+L++ E ++DF +A+ + ++ T AP+ L + K
Sbjct: 120 --RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 656 VTEKCDVYSFGVLALEVIKG 675
+ D++S G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 45/200 (22%)
Query: 509 IGKGGHGSVYIARVPSGEIFAVKKFHSPLPD--------------------------NFC 542
IG+G +G VY A+ GE FA+KK D +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 543 SHPRQSFIVYEYLESGSLDKILN------NDASAKELGWTQRLNVIKGVADALFYLHNNC 596
++ +V+E+L+ L K+L+ +AK L ++ G+A Y H+
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSF----LLQLLNGIA----YCHDR- 119
Query: 597 FPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE-LAYTMK 655
++H D+ +N+L++ E ++DF +A+ + ++ T AP+ L + K
Sbjct: 120 --RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 656 VTEKCDVYSFGVLALEVIKG 675
+ D++S G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 56/226 (24%)
Query: 490 KIVYEEIIRATNDFDAKHCIGKGGHGSVYIA-RVPSGEIFAVKK---FHSPL-------- 537
+IVY ++DF K +G+G +G V A P+GEI A+KK F PL
Sbjct: 4 RIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLRE 59
Query: 538 --------------------PDNFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQ 577
PD+F + + +I+ E +++ L+ S + L
Sbjct: 60 IKILKHFKHENIITIFNIQRPDSFENF-NEVYIIQELMQTD-----LHRVISTQMLSDDH 113
Query: 578 RLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS 637
I A+ LH + ++H D+ N+L++ + V DF +A+ ++ +++ S
Sbjct: 114 IQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 638 KLAGTHGNV----------APELAYT-MKVTEKCDVYSFGVLALEV 672
+ G + APE+ T K + DV+S G + E+
Sbjct: 171 EPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 26/204 (12%)
Query: 492 VYEEIIRATNDFDAKHCIGKGGHGSVYIA------RVPSGEIFAVKKFHS-----PLPDN 540
V +E I + + K C+ K + + R PS EI + ++ L D
Sbjct: 30 VVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDV 89
Query: 541 FCSHPRQSFIVYEYLESGSL-DKILNNDA-SAKELGWTQRLNVIKGVADALFYLHNNCFP 598
+ + ++V E + G L DKIL S +E + V+ + + YLH+
Sbjct: 90 Y-DDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLHSQG-- 141
Query: 599 PIVHWDISSKNVLL--DLGYEA--HVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTM 654
+VH D+ N+L + G + DF AK L ++ T VAPE+
Sbjct: 142 -VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQ 200
Query: 655 KVTEKCDVYSFGVLALEVIKGKHP 678
E CD++S G+L ++ G P
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
++V+E L+ GS IL + K + V++ VA AL +LH I H D+ +
Sbjct: 87 YLVFEKLQGGS---ILAHIQKQKHFNEREASRVVRDVAAALDFLHTK---GIAHRDLKPE 140
Query: 609 NVLLDLGYEA---HVSDFRIAKFLNLDSS-------NWSKLAGTHGNVAPELA--YTMKV 656
N+L + + + DF + + L++S + G+ +APE+ +T +
Sbjct: 141 NILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQA 200
Query: 657 T---EKCDVYSFGVLALEVIKGKHP 678
T ++CD++S GV+ ++ G P
Sbjct: 201 TFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 549 FIVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
++V E G L D+I+ S K +I+ V + Y+H N IVH D+
Sbjct: 102 YLVGEVYTGGELFDEII----SRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKP 154
Query: 608 KNVLLDLGYEA---HVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYS 664
+N+LL+ + + DF ++ K+ GT +APE+ + EKCDV+S
Sbjct: 155 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI-GTAYYIAPEVLHGT-YDEKCDVWS 212
Query: 665 FGVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 213 TGVILYILLSGCPP 226
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 68/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF AK L + +
Sbjct: 127 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 183
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 239
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 240 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 289
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 68/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF AK L + +
Sbjct: 122 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 234
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 235 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 284
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 549 FIVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
++V E G L D+I+ S K +I+ V + Y+H N IVH D+
Sbjct: 125 YLVGEVYTGGELFDEII----SRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKP 177
Query: 608 KNVLLD-LGYEAHVS--DFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYS 664
+N+LL+ +A++ DF ++ K+ GT +APE+ + EKCDV+S
Sbjct: 178 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI-GTAYYIAPEVLHGT-YDEKCDVWS 235
Query: 665 FGVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 236 TGVILYILLSGCPP 249
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 549 FIVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
++V E G L D+I+ S K +I+ V + Y+H N IVH D+
Sbjct: 126 YLVGEVYTGGELFDEII----SRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKP 178
Query: 608 KNVLLD-LGYEAHVS--DFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYS 664
+N+LL+ +A++ DF ++ K+ GT +APE+ + EKCDV+S
Sbjct: 179 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI-GTAYYIAPEVLHGT-YDEKCDVWS 236
Query: 665 FGVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 237 TGVILYILLSGCPP 250
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 11/155 (7%)
Query: 331 YLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQ--QIPIELDNLIHLSELDLSHNFLG 388
+LD S N L++ V E+ G L +L L L N+L + +I + L +LD+S N +
Sbjct: 328 HLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVS 387
Query: 389 EKISSRICR-MESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPNSTTFRD 447
C +SL LN+S N L+ I RC +L D+ NK++ IP
Sbjct: 388 YDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVL--DLHSNKIKS-IPKQV---- 440
Query: 448 APLEALQGNKGLCGDIRGFLSCMSYRKAS-RKIWI 481
LEALQ ++ + R S +KIW+
Sbjct: 441 VKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWL 475
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 260 LDVSINNITGNIPFEIGESPQLQYLDLSSNYI-----VGEIPTQLGNIIYLNRISLSGNK 314
LD S N +T + G +L+ L L N + + E+ TQ+ + L ++ +S N
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKS---LQQLDISQNS 385
Query: 315 LS-GRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDN 373
+S G+ +L L++S+N L++ + L +K+ L+L NK+ + IP ++
Sbjct: 386 VSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKV--LDLHSNKI-KSIPKQVVK 442
Query: 374 LIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPR 417
L L EL+++ N L R+ SL+K+ L N PR
Sbjct: 443 LEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 10/179 (5%)
Query: 180 LNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCIN 239
+N N + + + P +S F +L F NN + ++ + G+L L + L +N
Sbjct: 302 MNIKNFTVSGTRMVHMLCPSKISPFLHLDF---SNNLLTDTVFENCGHLTELETLILQMN 358
Query: 240 QLNGAIPLSIDWGRCPQLSLLDVSINNIT-GNIPFEIGESPQLQYLDLSSNYIVGEIPTQ 298
QL ++ + L LD+S N+++ + + L L++SSN + I
Sbjct: 359 QLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRC 418
Query: 299 LGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNF---VLESLGSLVKLY 354
L I + + L NK+ IP ++ L L+ L++++N L + + + L SL K++
Sbjct: 419 LPPRIKV--LDLHSNKIKS-IPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIW 474
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 308 ISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQI 367
+++S N +S ++ SL L L +S N + + +L YL+LSHNKL +
Sbjct: 26 LNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKL---V 82
Query: 368 PIELDNLIHLSELDLSHN-FLGEKISSRICRMESLEKLNLSYNNL--SGLIP 416
I ++L LDLS N F I M L+ L LS +L S ++P
Sbjct: 83 KISCHPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLP 134
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Query: 88 GINLTSISLNGTLLEFSF--SSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKL 145
+N+ + +++GT + S +LD NN L D + +L++LE L N+L
Sbjct: 301 NMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQL 360
Query: 146 SGHIPSEXXXXXXXXXXXXXRNQLNGSIPHEVGQLNFLNHLI---LDSNFLGGSIPRSLS 202
+Q + S + G ++ L+ + SN L +I R L
Sbjct: 361 KELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP 420
Query: 203 NFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGA 244
+ L L++N SIP+Q+ L++L ++ + NQL
Sbjct: 421 --PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSV 459
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 380 LDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKL 435
L++S N++ E +S I + L L +S+N + L F+ L ++D+S+NKL
Sbjct: 26 LNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKL 81
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 68/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF AK L + +
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 176
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 232
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 233 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 282
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 101/272 (37%), Gaps = 56/272 (20%)
Query: 500 TNDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVKKFHS----------------------- 535
+D + +G+G +G V R VPSG+I AVK+ +
Sbjct: 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC 65
Query: 536 PLPDNFCS---HPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVA----DA 588
P F +I E +++ SLDK + G T +++ +A A
Sbjct: 66 PFTVTFYGALFREGDVWICMELMDT-SLDKFYKQ---VIDKGQTIPEDILGKIAVSIVKA 121
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAP 648
L +LH+ ++H D+ NVL++ + + DF I+ +L +D AG +AP
Sbjct: 122 LEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL-VDDVAKDIDAGCKPYMAP 178
Query: 649 EL--------AYTMKVTEKCDVYSFGVLALEVIKGKHPRDXXXXXXXXXXXXXXXXXDSR 700
E Y++ K D++S G+ +E+ + P D
Sbjct: 179 ERINPELNQKGYSV----KSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE----- 229
Query: 701 LPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P P L + CL +N RPT
Sbjct: 230 -PSPQLPADKFSAEFVDFTSQCLKKNSKERPT 260
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 45/200 (22%)
Query: 509 IGKGGHGSVYIARVPSGEIFAVKKFHSPLPD--------------------------NFC 542
IG+G +G VY A+ GE FA+KK D +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 543 SHPRQSFIVYEYLESGSLDKILN------NDASAKELGWTQRLNVIKGVADALFYLHNNC 596
++ +V+E+L+ L K+L+ +AK L ++ G+A Y H+
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSF----LLQLLNGIA----YCHDR- 119
Query: 597 FPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE-LAYTMK 655
++H D+ +N+L++ E ++DF +A+ + ++ T AP+ L + K
Sbjct: 120 --RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK 177
Query: 656 VTEKCDVYSFGVLALEVIKG 675
+ D++S G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
++V EY G + L KE + + + A+ Y H IVH D+ ++
Sbjct: 89 YLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKF---IVHRDLKAE 142
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVT-EKCDVYSFGV 667
N+LLD ++DF + + + G+ APEL K + DV+S GV
Sbjct: 143 NLLLDADMNIKIADFGFSNEFTF-GNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 668 LALEVIKGKHPRD 680
+ ++ G P D
Sbjct: 202 ILYTLVSGSLPFD 214
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 68/174 (39%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF AK L + +
Sbjct: 124 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 180
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 181 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 236
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M + C + SRP + ++ + +P
Sbjct: 237 EKGERLPQPPICTIDVYM----IMVKCWMIDADSRPKFRELIIEFSKMARDPQR 286
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 46/215 (21%)
Query: 501 NDFDAKHCIGKGGHGSVYIARVP-------------------------SGEIFAVKKF-H 534
ND + IG+G G V AR+ +GE+ + K H
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 535 SPLPDNF---CSHPRQSFIVYEYLESGSL------DKILNND-------ASAKELGWTQR 578
P N C H ++ EY G+L ++L D ++A L Q
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
L+ VA + YL F +H +++++N+L+ Y A ++DF +++ +
Sbjct: 142 LHFAADVARGMDYLSQKQF---IHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 198
Query: 639 LAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVI 673
L Y++ T DV+S+GVL E++
Sbjct: 199 RLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 232
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
+V EY+ GSL L +G Q L + + + + YLH + +H ++++N
Sbjct: 89 LVMEYVPLGSLRDYLPRHC----VGLAQLLLFAQQICEGMAYLHAQHY---IHRALAARN 141
Query: 610 VLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSFG 666
VLLD + DF +AK + + V APE K DV+SFG
Sbjct: 142 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFG 201
Query: 667 VLALEVI 673
V E++
Sbjct: 202 VTLYELL 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
+V EY+ GSL L +G Q L + + + + YLH + +H ++++N
Sbjct: 90 LVMEYVPLGSLRDYLPRHC----VGLAQLLLFAQQICEGMAYLHAQHY---IHRALAARN 142
Query: 610 VLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVTEKCDVYSFG 666
VLLD + DF +AK + + V APE K DV+SFG
Sbjct: 143 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFG 202
Query: 667 VLALEVI 673
V E++
Sbjct: 203 VTLYELL 209
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHG 644
+ AL+YL ++H D+ N+LLD + + DF I+ L +D + AG
Sbjct: 133 IVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRL-VDDKAKDRSAGCAA 189
Query: 645 NVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGKHP 678
+APE T+ + DV+S G+ +E+ G+ P
Sbjct: 190 YMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 13/277 (4%)
Query: 168 QLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQ-IG 226
LNG +P + +N L L+L++N + ++F +L LY+ N + + +
Sbjct: 288 HLNG-LPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGNMRKLDLGTRCLE 346
Query: 227 NLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDL 286
L++L + L + + + ++ L L++S N G E PQL+ LD+
Sbjct: 347 KLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDV 406
Query: 287 SSNYIVGEIP-TQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNF--- 342
+ ++ + P + N+ L ++LS L L L +L +L+L N +
Sbjct: 407 AFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDGSIS 466
Query: 343 ---VLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRME 399
+L+ +GSL L + + + QQ L N+ H LDLSHN L + ++
Sbjct: 467 KTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNH---LDLSHNSLTGDSMDALSHLK 523
Query: 400 SLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLE 436
L LN++ NN+ + P L I++S+N L+
Sbjct: 524 GL-YLNMASNNIRIIPPHLLPALSQQSIINLSHNPLD 559
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 73/163 (44%), Gaps = 6/163 (3%)
Query: 281 LQYLDLSSNYIVGE--IPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANH 338
LQ LDLS + I QL N+ +L ++LS N+ G LE LD++ H
Sbjct: 351 LQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTH 410
Query: 339 LSNFVLES-LGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICR 397
L S +L L LNLSH L L L L L+L N + S+
Sbjct: 411 LHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDGSISKTNL 470
Query: 398 ME---SLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEG 437
++ SLE L LS NL + + F L + H+D+S+N L G
Sbjct: 471 LQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLDLSHNSLTG 513
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 10/144 (6%)
Query: 305 LNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLS 364
+ + L+ L+G +P + + +L+ L L+AN + S L L + N
Sbjct: 279 VQELDLTAAHLNG-LPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGNMRK 337
Query: 365 QQIPIE-LDNLIHLSELDLSHNFLGEKISSRICRME-----SLEKLNLSYNNLSGLIPRC 418
+ L+ L +L +LDLSH+ + +S C ++ L+ LNLSYN GL +
Sbjct: 338 LDLGTRCLEKLENLQKLDLSHSDIE---ASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQA 394
Query: 419 FEELHGLLHIDISYNKLEGHIPNS 442
F+E L +D+++ L P+S
Sbjct: 395 FKECPQLELLDVAFTHLHVKAPHS 418
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF AK L + +
Sbjct: 122 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 234
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M IM+ C + SRP + ++ + +P
Sbjct: 235 EKGERLPQPPICTIDVYM-IMR---KCWMIDADSRPKFRELIIEFSKMARDPQR 284
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 26/150 (17%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILN-------------NDASAKELGWTQRLNVIKGVADA 588
C+ +++ EY G+L + L N +++ + ++ +A
Sbjct: 110 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARG 169
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN-LDSSNWSKLAGTHGN-- 645
+ YL + +H D++++NVL+ ++DF +A+ +N +D + T+G
Sbjct: 170 MEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT----TNGRLP 222
Query: 646 ---VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 26/150 (17%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILN-------------NDASAKELGWTQRLNVIKGVADA 588
C+ +++ EY G+L + L N +++ + ++ +A
Sbjct: 110 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARG 169
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN-LDSSNWSKLAGTHGN-- 645
+ YL + +H D++++NVL+ ++DF +A+ +N +D + T+G
Sbjct: 170 MEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT----TNGRLP 222
Query: 646 ---VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 25/147 (17%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
++V+E + GS IL++ + + V++ VA AL +LHN I H D+ +
Sbjct: 87 YLVFEKMRGGS---ILSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPE 140
Query: 609 NVLLDLGYEAHVSDFRIAKF-------LNLDSSNWSKL-----AGTHGNVAPEL--AYTM 654
N+L + + VS +I F LN D S S G+ +APE+ A++
Sbjct: 141 NILCE--HPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSE 198
Query: 655 KVT---EKCDVYSFGVLALEVIKGKHP 678
+ + ++CD++S GV+ ++ G P
Sbjct: 199 EASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 25/147 (17%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
++V+E + GS IL++ + + V++ VA AL +LHN I H D+ +
Sbjct: 87 YLVFEKMRGGS---ILSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPE 140
Query: 609 NVLLDLGYEAHVSDFRIAKF-------LNLDSSNWSKL-----AGTHGNVAPEL--AYTM 654
N+L + + VS +I F LN D S S G+ +APE+ A++
Sbjct: 141 NILCE--HPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSE 198
Query: 655 KVT---EKCDVYSFGVLALEVIKGKHP 678
+ + ++CD++S GV+ ++ G P
Sbjct: 199 EASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 9/135 (6%)
Query: 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDIS 606
+F+V E L G L K T+ +++ + A+ ++H+ +VH D+
Sbjct: 80 HTFLVMELLNGGEL---FERIKKKKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLK 133
Query: 607 SKNVLL---DLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVY 663
+N+L + E + DF A+ D+ T APEL E CD++
Sbjct: 134 PENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLW 193
Query: 664 SFGVLALEVIKGKHP 678
S GV+ ++ G+ P
Sbjct: 194 SLGVILYTMLSGQVP 208
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 14/174 (8%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
LN +A + YL + +VH D++++NVL+ ++DF AK L + +
Sbjct: 122 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXX 695
G +A E T + DV+S+GV E++ G P D
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSIL 234
Query: 696 XXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749
RLP P + + +M IM+ C + SRP + ++ + +P
Sbjct: 235 EKGERLPQPPICTIDVYM-IMR---KCWMIDADSRPKFRELIIEFSKMARDPQR 284
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+++ EY G + L KE + + + + A+ Y H IVH D+ ++
Sbjct: 87 YLIMEYASGGEVFDYLVAHGRMKE---KEARSKFRQIVSAVQYCHQK---RIVHRDLKAE 140
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVT-EKCDVYSFGV 667
N+LLD ++DF + + G+ APEL K + DV+S GV
Sbjct: 141 NLLLDADMNIKIADFGFSNEFTV-GGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 199
Query: 668 LALEVIKGKHPRD 680
+ ++ G P D
Sbjct: 200 ILYTLVSGSLPFD 212
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 46/113 (40%), Gaps = 2/113 (1%)
Query: 306 NRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQ 365
R+ L NKL G L L L LS N + + L KL L L NKL Q
Sbjct: 31 TRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKL-Q 89
Query: 366 QIPIEL-DNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPR 417
+P + D L L EL L N L R+ SL+K+ L N PR
Sbjct: 90 SLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 55/131 (41%), Gaps = 1/131 (0%)
Query: 306 NRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHN-KLS 364
RI L GN++S S NL L L +N L+ + L L L+LS N +L
Sbjct: 34 QRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLR 93
Query: 365 QQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHG 424
P L HL L L L E + +L+ L L NNL L F +L
Sbjct: 94 VVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGN 153
Query: 425 LLHIDISYNKL 435
L H+ + N++
Sbjct: 154 LTHLFLHGNRI 164
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 25/183 (13%)
Query: 254 CPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEI-PTQLGNIIYLNRISLSG 312
C L++L + N + G L+ LDLS N + + PT + +L+ + L
Sbjct: 54 CRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDR 113
Query: 313 NKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELD 372
L PG L L+YL L N+L + L L +L L N++ +P
Sbjct: 114 CGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIP-SVP---- 168
Query: 373 NLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISY 432
H F G + SL++L L N+++ + P F +L L+ + +
Sbjct: 169 ----------EHAFRG---------LHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFA 209
Query: 433 NKL 435
N L
Sbjct: 210 NNL 212
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILN-------------NDASAKELGWTQRLNVIKGVADA 588
C+ +++ EY G+L + L N +++ + ++ +A
Sbjct: 97 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARG 156
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN--- 645
+ YL + +H D++++NVL+ ++DF +A+ +N + ++ K T+G
Sbjct: 157 MEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDIN--NIDYYK-KTTNGRLPV 210
Query: 646 --VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 211 KWMAPEALFDRVYTHQSDVWSFGVLMWEI 239
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
++V EY G + L KE + + + A+ Y H IVH D+ ++
Sbjct: 89 YLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKF---IVHRDLKAE 142
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVT-EKCDVYSFGV 667
N+LLD ++DF + + G+ APEL K + DV+S GV
Sbjct: 143 NLLLDADMNIKIADFGFSNEFTF-GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 668 LALEVIKGKHPRD 680
+ ++ G P D
Sbjct: 202 ILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
++V EY G + L KE + + + A+ Y H IVH D+ ++
Sbjct: 89 YLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKF---IVHRDLKAE 142
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVT-EKCDVYSFGV 667
N+LLD ++DF + + G+ APEL K + DV+S GV
Sbjct: 143 NLLLDADMNIKIADFGFSNEFTF-GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 668 LALEVIKGKHPRD 680
+ ++ G P D
Sbjct: 202 ILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
++V EY G + L KE + + + A+ Y H IVH D+ ++
Sbjct: 89 YLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKF---IVHRDLKAE 142
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVT-EKCDVYSFGV 667
N+LLD ++DF + + G+ APEL K + DV+S GV
Sbjct: 143 NLLLDADMNIKIADFGFSNEFTF-GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 668 LALEVIKGKHPRD 680
+ ++ G P D
Sbjct: 202 ILYTLVSGSLPFD 214
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILN-------------NDASAKELGWTQRLNVIKGVADA 588
C+ +++ EY G+L + L N +++ + ++ +A
Sbjct: 110 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARG 169
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN--- 645
+ YL + +H D++++NVL+ ++DF +A+ +N + ++ K T+G
Sbjct: 170 MEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDIN--NIDYYK-KTTNGRLPV 223
Query: 646 --VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILN-------------NDASAKELGWTQRLNVIKGVADA 588
C+ +++ EY G+L + L N +++ + ++ +A
Sbjct: 156 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARG 215
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN--- 645
+ YL + +H D++++NVL+ ++DF +A+ +N + ++ K T+G
Sbjct: 216 MEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDIN--NIDYYK-KTTNGRLPV 269
Query: 646 --VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 270 KWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+++ EY G + L KE + + + + A+ Y H IVH D+ ++
Sbjct: 90 YLIMEYASGGEVFDYLVAHGRMKE---KEARSKFRQIVSAVQYCHQK---RIVHRDLKAE 143
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVT-EKCDVYSFGV 667
N+LLD ++DF + + G APEL K + DV+S GV
Sbjct: 144 NLLLDADMNIKIADFGFSNEFTV-GGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 202
Query: 668 LALEVIKGKHPRD 680
+ ++ G P D
Sbjct: 203 ILYTLVSGSLPFD 215
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILN-------------NDASAKELGWTQRLNVIKGVADA 588
C+ +++ EY G+L + L N +++ + ++ +A
Sbjct: 99 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARG 158
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN--- 645
+ YL + +H D++++NVL+ ++DF +A+ +N + ++ K T+G
Sbjct: 159 MEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDIN--NIDYYK-KTTNGRLPV 212
Query: 646 --VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 213 KWMAPEALFDRVYTHQSDVWSFGVLMWEI 241
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Query: 549 FIVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
++V E G L D+I+ S K +I+ V + Y H N IVH D+
Sbjct: 102 YLVGEVYTGGELFDEII----SRKRFSEVDAARIIRQVLSGITYXHKN---KIVHRDLKP 154
Query: 608 KNVLLD-LGYEAHVS--DFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYS 664
+N+LL+ +A++ DF ++ K+ GT +APE+ + EKCDV+S
Sbjct: 155 ENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI-GTAYYIAPEVLHGT-YDEKCDVWS 212
Query: 665 FGVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 213 TGVILYILLSGCPP 226
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILN-------------NDASAKELGWTQRLNVIKGVADA 588
C+ +++ EY G+L + L N +++ + ++ +A
Sbjct: 102 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARG 161
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN--- 645
+ YL + +H D++++NVL+ ++DF +A+ +N + ++ K T+G
Sbjct: 162 MEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDIN--NIDYYK-KTTNGRLPV 215
Query: 646 --VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 216 KWMAPEALFDRVYTHQSDVWSFGVLMWEI 244
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Query: 586 ADALFYLHNNCF-------PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
A A+FY C IV+ D+ +N+LLD +SD +A + +
Sbjct: 286 ARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVP-EGQTIKG 344
Query: 639 LAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
GT G +APE+ + T D ++ G L E+I G+ P
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Query: 586 ADALFYLHNNCF-------PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
A A+FY C IV+ D+ +N+LLD +SD +A + +
Sbjct: 286 ARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVP-EGQTIKG 344
Query: 639 LAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
GT G +APE+ + T D ++ G L E+I G+ P
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 580 NVIKGVADALFYLHNNCFPPIVHWDISSKNVLLD---LGYEAHVSDFRIAKFLNLDSSNW 636
+ I+ + +A+ + H +VH D+ +N+LL G ++DF +A + D W
Sbjct: 107 HCIQQILEAVLHCHQM---GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAW 163
Query: 637 SKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
AGT G ++PE+ + D+++ GV+ ++ G P
Sbjct: 164 FGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILN-------------NDASAKELGWTQRLNVIKGVADA 588
C+ +++ EY G+L + L N +++ + ++ +A
Sbjct: 110 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARG 169
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN--- 645
+ YL + +H D++++NVL+ ++DF +A+ +N + ++ K T+G
Sbjct: 170 MEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDIN--NIDYYK-KTTNGRLPV 223
Query: 646 --VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILN-------------NDASAKELGWTQRLNVIKGVADA 588
C+ +++ EY G+L + L N +++ + ++ +A
Sbjct: 110 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARG 169
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN--- 645
+ YL + +H D++++NVL+ ++DF +A+ +N + ++ K T+G
Sbjct: 170 MEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDIN--NIDYYK-KTTNGRLPV 223
Query: 646 --VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 549 FIVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
+IV E G L D+I+ K +IK V + Y+H + IVH D+
Sbjct: 97 YIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKP 149
Query: 608 KNVLLD---LGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYS 664
+N+LL+ + + DF ++ ++ ++ GT +APE+ EKCDV+S
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYIAPEVLRGT-YDEKCDVWS 207
Query: 665 FGVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 208 AGVILYILLSGTPP 221
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 31/199 (15%)
Query: 508 CIGKGGHGSVYIAR-VPSGEIFAVK--------------KFHSPLPDNFCSHPRQSFIVY 552
IGKG V +AR + +G+ AVK F +HP ++
Sbjct: 14 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP-NIVKLF 72
Query: 553 EYLESGSLDKILNNDASAKEL-------GWTQRLNV---IKGVADALFYLHNNCFPPIVH 602
E +E+ ++ AS E+ GW + + + A+ Y H IVH
Sbjct: 73 EVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF---IVH 129
Query: 603 WDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVT-EKCD 661
D+ ++N+LLD ++DF + + G+ APEL K + D
Sbjct: 130 RDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDTFCGSPPYAAPELFQGKKYDGPEVD 188
Query: 662 VYSFGVLALEVIKGKHPRD 680
V+S GV+ ++ G P D
Sbjct: 189 VWSLGVILYTLVSGSLPFD 207
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILN-------------NDASAKELGWTQRLNVIKGVADA 588
C+ +++ EY G+L + L N +++ + ++ +A
Sbjct: 110 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARG 169
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN--- 645
+ YL + +H D++++NVL+ ++DF +A+ +N + ++ K T+G
Sbjct: 170 MEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDIN--NIDYYK-KTTNGRLPV 223
Query: 646 --VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 549 FIVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
+IV E G L D+I+ K +IK V + Y+H + IVH D+
Sbjct: 97 YIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKP 149
Query: 608 KNVLLDLGY---EAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYS 664
+N+LL+ + + DF ++ ++ ++ GT +APE+ EKCDV+S
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYIAPEVLRGT-YDEKCDVWS 207
Query: 665 FGVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 208 AGVILYILLSGTPP 221
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 80/208 (38%), Gaps = 37/208 (17%)
Query: 501 NDFDAKHCIGKGGHGSVYIARVPSGEIF-AVKKFHSP-----------------LPDNFC 542
+DF IGKG G V +AR + E+F AVK L N
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKN-V 96
Query: 543 SHP------------RQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALF 590
HP + + V +Y+ G L L + E + +A AL
Sbjct: 97 KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLE---PRARFYAAEIASALG 153
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ IV+ D+ +N+LLD ++DF + K +S S GT +APE+
Sbjct: 154 YLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEV 210
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ D + G + E++ G P
Sbjct: 211 LHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ +++ D+ +N+L+D V+DF AK + W LAGT +APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LAGTPEYLAPEI 209
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 80/211 (37%), Gaps = 51/211 (24%)
Query: 508 CIGKGGHGSVYIARVPSGEIFAVKKFHSPLPDNFCSHPR--------------------- 546
C+GKG +G V+ + GE AVK F S ++
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMT 73
Query: 547 ------QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF--- 597
Q +++ Y E GSL L L L + A L +LH F
Sbjct: 74 SRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----LRLAVSAACGLAHLHVEIFGTQ 129
Query: 598 --PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN-----LDSSNWSKLAGTHGNVAPEL 650
P I H D S+NVL+ + ++D +A + LD N + GT +APE+
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGN-NPRVGTKRYMAPEV 188
Query: 651 AYTMKVTEKC-------DVYSFGVLALEVIK 674
++ C D+++FG++ E+ +
Sbjct: 189 -LDEQIRTDCFESYKWTDIWAFGLVLWEIAR 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 549 FIVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
+IV E G L D+I+ K +IK V + Y+H + IVH D+
Sbjct: 97 YIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKP 149
Query: 608 KNVLLD---LGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYS 664
+N+LL+ + + DF ++ ++ ++ GT +APE+ EKCDV+S
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYIAPEVLRGT-YDEKCDVWS 207
Query: 665 FGVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 208 AGVILYILLSGTPP 221
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
++V EY G + L KE + + + A+ Y H IVH D+ ++
Sbjct: 89 YLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKF---IVHRDLKAE 142
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVT-EKCDVYSFGV 667
N+LLD ++DF + + G APEL K + DV+S GV
Sbjct: 143 NLLLDADMNIKIADFGFSNEFTF-GNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 668 LALEVIKGKHPRD 680
+ ++ G P D
Sbjct: 202 ILYTLVSGSLPFD 214
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 77/196 (39%), Gaps = 9/196 (4%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRL-NVIKGVADALFYLHNNCFPPIVHWDISSK 608
IV E ++G L +++ + K L + + + AL ++H+ ++H DI
Sbjct: 109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPA 165
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
NV + + D + +F + ++ L GT ++PE + K D++S G L
Sbjct: 166 NVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCL 225
Query: 669 ALEVIKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPV 728
E+ + P + YP L + + Q+ C++ +P
Sbjct: 226 LYEMAALQSP-----FYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPE 280
Query: 729 SRPTMKRFEVQSKQFH 744
RP + +K+ H
Sbjct: 281 KRPDVTYVYDVAKRMH 296
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 583 KGVADALFYLHNNCFPPIVHWDISSKNVLLD--LGYEAHVSDFRIAKFLNLDSSNWSK-L 639
+ + L +LH PPI+H D+ N+ + G + D +A L ++++K +
Sbjct: 136 RQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTG-SVKIGDLGLA---TLKRASFAKAV 190
Query: 640 AGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
GT APE Y K E DVY+FG LE ++P
Sbjct: 191 IGTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%)
Query: 347 LGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNL 406
G L L L L N+L+ P + H+ EL L N + E + + L+ LNL
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 407 SYNNLSGLIPRCFEELHGLLHIDISYN 433
N +S ++P FE L+ L ++++ N
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 251 WGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLG-NIIYLNRIS 309
+GR P L L++ N +TG P + +Q L L N I EI ++ + L ++
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK-EISNKMFLGLHQLKTLN 108
Query: 310 LSGNKLSGRIPGELGSLINLEYLDLSAN 337
L N++S +PG L +L L+L++N
Sbjct: 109 LYDNQISCVMPGSFEHLNSLTSLNLASN 136
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 78/207 (37%), Gaps = 35/207 (16%)
Query: 502 DFDAKHCIGKGGHGSVYIAR-VPSGEIFAVKK--------------FHSPLPDNFCSHP- 545
++ + IGKG V +AR V +G AVK F +HP
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 546 -----------RQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHN 594
+ ++V EY G + L KE + + + A+ Y H
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQ 132
Query: 595 NCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTM 654
IVH D+ ++N+LLD ++DF + + + G+ APEL
Sbjct: 133 KY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTV-GNKLDTFCGSPPYAAPELFQGK 188
Query: 655 KVT-EKCDVYSFGVLALEVIKGKHPRD 680
K + DV+S GV+ ++ G P D
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
++V EY G + L KE + + + A+ Y H IVH D+ ++
Sbjct: 89 YLVXEYASGGEVFDYLVAHGRXKEKEARAKF---RQIVSAVQYCHQKF---IVHRDLKAE 142
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVT-EKCDVYSFGV 667
N+LLD ++DF + + G APEL K + DV+S GV
Sbjct: 143 NLLLDADXNIKIADFGFSNEFTF-GNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 668 LALEVIKGKHPRD 680
+ ++ G P D
Sbjct: 202 ILYTLVSGSLPFD 214
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 581 VIKGVADALFYLHNNCFPPIVHWDISSKNVLL---DLGYEAHVSDFRIAKFLNLDSSNWS 637
VI+ V A+ YLH N IVH D+ +N+L + + ++DF ++K + S
Sbjct: 111 VIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ--NGIMS 165
Query: 638 KLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
GT G VAPE+ ++ D +S GV+ ++ G P
Sbjct: 166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ +++ D+ +N+L+D V+DF AK + + W+ L GT +APE+
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGATWT-LCGTPEYLAPEI 230
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D ++ GVL E+ G P
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2XOT|A Chain A, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
pdb|2XOT|B Chain B, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
Length = 361
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 22/165 (13%)
Query: 197 IPRSLSNFTNLVFLYLYNNSF--SGSIPQQIGNLKSLFDMKLCINQLN-----GAIPLSI 249
+P+SL ++T L+ L N S + P ++ NL SL L N LN +P+
Sbjct: 33 VPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLL---LSHNHLNFISSEAFVPV-- 87
Query: 250 DWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRIS 309
P L LD+S N++ F + L+ L L +N+IV ++ L ++
Sbjct: 88 -----PNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLY 142
Query: 310 LSGNKLSGRIPGEL----GSLINLEYLDLSANHLSNFVLESLGSL 350
LS N++S R P EL L L LDLS+N L L L L
Sbjct: 143 LSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKL 186
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 12/135 (8%)
Query: 306 NRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLE-SLGSLVKLYYLNLSHNKL- 363
N +S S +L +P L S L LDLS N+LS E + L L+ L LSHN L
Sbjct: 21 NILSCSKQQLPN-VPQSLPSYTAL--LDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN 77
Query: 364 --SQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPR-CFE 420
S + + + NL +L DLS N L +++LE L L YNN ++ R FE
Sbjct: 78 FISSEAFVPVPNLRYL---DLSSNHLHTLDEFLFSDLQALEVL-LLYNNHIVVVDRNAFE 133
Query: 421 ELHGLLHIDISYNKL 435
++ L + +S N++
Sbjct: 134 DMAQLQKLYLSQNQI 148
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 58/141 (41%), Gaps = 42/141 (29%)
Query: 284 LDLSSNYI----VGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHL 339
LDLS N + PT+L N L+ + LS N L+ + NL YLDLS+NHL
Sbjct: 44 LDLSHNNLSRLRAEWTPTRLTN---LHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHL 100
Query: 340 SNF---------------------------VLESLGSLVKLYYLNLSHNKLSQQIPIEL- 371
E + L KLY LS N++S + P+EL
Sbjct: 101 HTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLY---LSQNQIS-RFPVELI 156
Query: 372 ---DNLIHLSELDLSHNFLGE 389
+ L L LDLS N L +
Sbjct: 157 KDGNKLPKLMLLDLSSNKLKK 177
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILN-------------NDASAKELGWTQRLNVIKGVADA 588
C+ +++ EY G+L + L N +++ + ++ +A
Sbjct: 110 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARG 169
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN--- 645
+ YL + +H D++++NVL+ ++DF +A+ +N + ++ K T+G
Sbjct: 170 MEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDIN--NIDYYK-NTTNGRLPV 223
Query: 646 --VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 26/201 (12%)
Query: 503 FDAKHCIGKGGHGSVY----IARVPSGEIFAVK-----------KFHSPLPDNFCSHPRQ 547
F+ +G+G G V+ + R SG ++A+K + + + + +
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 548 SFIV---YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFP------ 598
F+V Y + G L IL+ +L V+ D FYL
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDF-LRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHS 148
Query: 599 -PIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVT 657
I++ D+ +N+LLD ++DF ++K GT +APE+ +
Sbjct: 149 LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHS 208
Query: 658 EKCDVYSFGVLALEVIKGKHP 678
D +S+GVL E++ G P
Sbjct: 209 HSADWWSYGVLMFEMLTGSLP 229
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 254 CPQLSLLDV---SINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISL 310
C L+ LD+ SI+ I N PF+ L LDLS N G T+LG + L +
Sbjct: 96 CTNLTELDLMSNSIHKIKSN-PFK--NQKNLIKLDLSHN---GLSSTKLGTGVQLENLQE 149
Query: 311 ---SGNKLSGRIPGELGSLIN--LEYLDLSANHLSNF---VLESLGSLVKLYYLNLSHN- 361
+ NK+ EL L N L LDLS+N L F +++G L L N N
Sbjct: 150 LLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNP 209
Query: 362 KLSQQIPIELDNLIHLSELDLSHNFLGEKISSRIC--RMESLEKLNLSYNNLSGLIPRCF 419
L++++ EL N + L L++N L S + +L +L+LSYNNL + F
Sbjct: 210 HLTEKLCWELSN-TSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSF 268
Query: 420 EELHGLLHIDISYNKLEGHIPNS 442
L L ++ + YN ++ P S
Sbjct: 269 SYLPSLRYLSLEYNNIQRLSPRS 291
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 129/333 (38%), Gaps = 53/333 (15%)
Query: 97 NGTLLEFSFSSFPHLAY-----LDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPS 151
N LL S S+F L + LDL N L D+ S L L YL N + P
Sbjct: 231 NNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPR 290
Query: 152 EXXXXXXXXXXXXXRNQLNGSIP---------HEVGQLNFLNHLILDSNFLGGSIPRSLS 202
R S+ L +L +L +D N +IP + S
Sbjct: 291 SFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDN----NIPSTKS 346
Query: 203 N-FTNLVFLYLYNNSFSGSIPQQIGNL-------KSLFDMKLCINQLNGAIPLSIDWGRC 254
N FT LV L + S + + Q + N L + L N ++ + W
Sbjct: 347 NTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLNLTKNHISKIANGTFSW--L 404
Query: 255 PQLSLLDVSINNITGNIP----------FEIGESPQLQYLDLSSNYIVGEIPTQLGNIIY 304
QL +LD+ +N I + FEI S +YL LS++ +P+ +
Sbjct: 405 GQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYN-KYLQLSTSSF-ALVPSL--QRLM 460
Query: 305 LNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLS 364
L R++L +S P L NL LDLS N+++N + L L L L+ HN L+
Sbjct: 461 LRRVALKNVDIS---PSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEILDFQHNNLA 517
Query: 365 QQI-------PIE-LDNLIHLSELDLSHNFLGE 389
+ P+ L L HL L+L N L E
Sbjct: 518 RLWKRANPGGPVNFLKGLSHLHILNLESNGLDE 550
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 305 LNRISLSGNKLSGRIPGELGSL--INLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNK 362
+ +SL+ N+L L NL LDLS N+L + S L L YL+L +N
Sbjct: 224 IQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNN 283
Query: 363 LSQQIPIELDNLIHLSELDLSHNFLGEKIS---------SRICRMESLEKLNLSYNNLSG 413
+ + P L +L L L F + +S ++ LE LN+ NN+
Sbjct: 284 IQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPS 343
Query: 414 LIPRCFEELHGLLHIDIS 431
F L L ++ +S
Sbjct: 344 TKSNTFTGLVSLKYLSLS 361
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 87/215 (40%), Gaps = 61/215 (28%)
Query: 509 IGKGGHGSVYIARVPSGEIFAVKKFHSPLPDNFCSHPR---------------------- 546
IGKG +G V++ + GE AVK F + ++
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKG 103
Query: 547 -----QSFIVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF--- 597
Q +++ +Y E+GSL D + + AK + L + L +LH F
Sbjct: 104 TGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM-----LKLAYSSVSGLCHLHTEIFSTQ 158
Query: 598 --PPIVHWDISSKNVLLDLGYEAHVSDFRIA-KFLNLDSSNW----SKLAGTHGNVAPEL 650
P I H D+ SKN+L+ ++D +A KF++ D++ + GT + PE+
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS-DTNEVDIPPNTRVGTKRYMPPEV 217
Query: 651 -----------AYTMKVTEKCDVYSFGVLALEVIK 674
+Y M D+YSFG++ EV +
Sbjct: 218 LDESLNRNHFQSYIM-----ADMYSFGLILWEVAR 247
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
++ AL YL + F VH DI+++NVL+ + DF +++++ DS+ + G
Sbjct: 120 LSTALAYLESKRF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLP 175
Query: 644 -GNVAPELAYTMKVTEKCDVYSFGVLALEVI 673
+APE + T DV+ FGV E++
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3O53|A Chain A, Crystal Structure Of Lrim1 Leucine-Rich Repeat Domain
pdb|3O53|B Chain B, Crystal Structure Of Lrim1 Leucine-Rich Repeat Domain
Length = 317
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 328 NLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFL 387
N++ LDLS N LS L KL LNLS N L + ++L++L L LDL++N++
Sbjct: 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE--TLDLESLSTLRTLDLNNNYV 92
Query: 388 GEKISSRICRMESLEKLNLSYNNLS 412
E + S+E L+ + NN+S
Sbjct: 93 QELLVG-----PSIETLHAANNNIS 112
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 53/229 (23%)
Query: 493 YEEIIRA-------TNDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVK---KFH------- 534
YE+I++ D+D IG+G G V + R S +++A+K KF
Sbjct: 60 YEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDS 119
Query: 535 --------------SP-LPDNFCSHPRQSF--IVYEYLESGSLDKILNN-DASAKELGWT 576
SP + FC+ + +V EY+ G L +++N D K W
Sbjct: 120 AFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK---WA 176
Query: 577 QRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNW 636
+ V AL +H+ ++H D+ N+LLD ++DF + +D +
Sbjct: 177 KFYTA--EVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADF--GTCMKMDETGM 229
Query: 637 ---SKLAGTHGNVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHP 678
GT ++PE+ + +CD +S GV E++ G P
Sbjct: 230 VHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W+ L GT +APE+ + +
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWT-LCGTPEYLAPEIILSKGYNKA 204
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 205 VDWWALGVLIYEMAAGYPP 223
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
++ AL YL + F VH DI+++NVL+ + DF +++++ DS+ + G
Sbjct: 500 LSTALAYLESKRF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLP 555
Query: 644 -GNVAPELAYTMKVTEKCDVYSFGVLALEVI 673
+APE + T DV+ FGV E++
Sbjct: 556 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W+ L GT +APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWT-LCGTPEYLAPEIILSKGYNKA 219
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHG 644
VA + +L F VH D++++NVL+ G + DF +A+ + DS+ G
Sbjct: 181 VAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN-----YVVRG 232
Query: 645 N-------VAPELAYTMKVTEKCDVYSFGVLALEVI 673
N +APE + T K DV+S+G+L E+
Sbjct: 233 NARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 367 IPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGL 425
+P EL N HL+ +DLS+N + + M L L LSYN L + PR F+ L L
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSL 104
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 25/126 (19%)
Query: 310 LSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPI 369
L GN+ + +P EL + +L +DLS N +S +S ++ +L L LS+N+L P
Sbjct: 38 LDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPR 96
Query: 370 ELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHID 429
D L +SL L+L N++S + F +L L H+
Sbjct: 97 TFDGL------------------------KSLRLLSLHGNDISVVPEGAFNDLSALSHLA 132
Query: 430 ISYNKL 435
I N L
Sbjct: 133 IGANPL 138
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Query: 173 IPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLF 232
IP +V +L LD N +P+ LSN+ +L + L NN S Q N+ L
Sbjct: 29 IPRDVTEL------YLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLL 81
Query: 233 DMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNIT 268
+ L N+L P + D + L LL + N+I+
Sbjct: 82 TLILSYNRLRCIPPRTFDGLK--SLRLLSLHGNDIS 115
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
++ AL YL + F VH DI+++NVL+ + DF +++++ DS+ + G
Sbjct: 148 LSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLP 203
Query: 644 -GNVAPELAYTMKVTEKCDVYSFGVLALEVI 673
+APE + T DV+ FGV E++
Sbjct: 204 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 98/273 (35%), Gaps = 58/273 (21%)
Query: 500 TNDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVKKFHSPLPDNFCSHPRQ----------- 547
+D + +G+G +G V R VPSG+I AVK+ + + N R
Sbjct: 33 ADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATV--NSQEQKRLLXDLDISXRTV 90
Query: 548 --SFIVYEY--------------LESGSLDKILNNDASAKELGWTQRLNVIKGVA----D 587
F V Y L SLDK + G T +++ +A
Sbjct: 91 DCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQ---VIDKGQTIPEDILGKIAVSIVK 147
Query: 588 ALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVA 647
AL +LH+ ++H D+ NVL++ + DF I+ +L +D AG A
Sbjct: 148 ALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYL-VDDVAKDIDAGCKPYXA 204
Query: 648 PEL--------AYTMKVTEKCDVYSFGVLALEVIKGKHPRDXXXXXXXXXXXXXXXXXDS 699
PE Y++ K D++S G+ +E+ + P D
Sbjct: 205 PERINPELNQKGYSV----KSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEE---- 256
Query: 700 RLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
P P L + CL +N RPT
Sbjct: 257 --PSPQLPADKFSAEFVDFTSQCLKKNSKERPT 287
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 27/148 (18%)
Query: 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH------NNCFPPI 600
+ +V EY +GSL K L+ S W + V L YLH ++ P I
Sbjct: 86 EYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAI 141
Query: 601 VHWDISSKNVLL---------DLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL- 650
H D++S+NVL+ D G ++ R+ + D++ S++ GT +APE+
Sbjct: 142 SHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV-GTIRYMAPEVL 200
Query: 651 --AYTMKVTE----KCDVYSFGVLALEV 672
A ++ E + D+Y+ G++ E+
Sbjct: 201 EGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
++ AL YL + F VH DI+++NVL+ + DF +++++ DS+ + G
Sbjct: 123 LSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLP 178
Query: 644 -GNVAPELAYTMKVTEKCDVYSFGVLALEVI 673
+APE + T DV+ FGV E++
Sbjct: 179 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
++ AL YL + F VH DI+++NVL+ + DF +++++ DS+ + G
Sbjct: 120 LSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLP 175
Query: 644 -GNVAPELAYTMKVTEKCDVYSFGVLALEVI 673
+APE + T DV+ FGV E++
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
++ AL YL + F VH DI+++NVL+ + DF +++++ DS+ + G
Sbjct: 120 LSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLP 175
Query: 644 -GNVAPELAYTMKVTEKCDVYSFGVLALEVI 673
+APE + T DV+ FGV E++
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 600 IVHWDISSKNVLL---DLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKV 656
IVH D+ +N+LL G ++DF +A + D W AGT G ++PE+
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 657 TEKCDVYSFGVLALEVIKGKHP 678
+ D+++ GV+ ++ G P
Sbjct: 184 GKPVDMWACGVILYILLVGYPP 205
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
++ AL YL + F VH DI+++NVL+ + DF +++++ DS+ + G
Sbjct: 122 LSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLP 177
Query: 644 -GNVAPELAYTMKVTEKCDVYSFGVLALEVI 673
+APE + T DV+ FGV E++
Sbjct: 178 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
++ AL YL + F VH DI+++NVL+ + DF +++++ DS+ + G
Sbjct: 125 LSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLP 180
Query: 644 -GNVAPELAYTMKVTEKCDVYSFGVLALEVI 673
+APE + T DV+ FGV E++
Sbjct: 181 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3OJA|A Chain A, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 487
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 328 NLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFL 387
N++ LDLS N LS L KL LNLS N L + ++L++L L LDL++N++
Sbjct: 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE--TLDLESLSTLRTLDLNNNYV 92
Query: 388 GEKISSRICRMESLEKLNLSYNNLS 412
E + S+E L+ + NN+S
Sbjct: 93 QELLVG-----PSIETLHAANNNIS 112
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
++ AL YL + F VH DI+++NVL+ + DF +++++ DS+ + G
Sbjct: 500 LSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLP 555
Query: 644 -GNVAPELAYTMKVTEKCDVYSFGVLALEVI 673
+APE + T DV+ FGV E++
Sbjct: 556 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
++ AL YL + F VH DI+++NVL+ + DF +++++ DS+ + G
Sbjct: 117 LSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLP 172
Query: 644 -GNVAPELAYTMKVTEKCDVYSFGVLALEVI 673
+APE + T DV+ FGV E++
Sbjct: 173 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 13/143 (9%)
Query: 540 NFCSHPRQSFIVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 598
F R ++V E G L D+I+ ++ ++K V YLH +
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEIILR----QKFSEVDAAVIMKQVLSGTTYLHKH--- 140
Query: 599 PIVHWDISSKNVLLDLGYE---AHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMK 655
IVH D+ +N+LL+ + DF ++ + +L GT +APE+ K
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL-GTAYYIAPEVL-RKK 198
Query: 656 VTEKCDVYSFGVLALEVIKGKHP 678
EKCDV+S GV+ ++ G P
Sbjct: 199 YDEKCDVWSCGVILYILLCGYPP 221
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 600 IVHWDISSKNVLL---DLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKV 656
IVH D+ +N+LL G ++DF +A + D W AGT G ++PE+
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 657 TEKCDVYSFGVLALEVIKGKHP 678
+ D+++ GV+ ++ G P
Sbjct: 184 GKPVDMWACGVILYILLVGYPP 205
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 12/135 (8%)
Query: 549 FIVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
++V E ++ G L DKIL K + V+ + + YLH +VH D+
Sbjct: 92 YVVTELMKGGELLDKILRQ----KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKP 144
Query: 608 KNVLL--DLG--YEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVY 663
N+L + G + DF AK L ++ T VAPE+ CD++
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIW 204
Query: 664 SFGVLALEVIKGKHP 678
S GVL ++ G P
Sbjct: 205 SLGVLLYTMLTGYTP 219
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGT--HGNVAPELAYTMKVT 657
+VH D++++N+L+ G + +SDF +++ + + S + G +A E + T
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 658 EKCDVYSFGVLALEVI 673
+ DV+SFGVL E++
Sbjct: 231 TQSDVWSFGVLLWEIV 246
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 210 LYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITG 269
LY+ N+ P N+ L + L N L ++P I + P+L+ L +S NN+
Sbjct: 98 LYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL-SSLPRGI-FHNTPKLTTLSMSNNNLER 155
Query: 270 NIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINL 329
+ LQ L LSSN + L I L ++S N LS L I +
Sbjct: 156 IEDDTFQATTSLQNLQLSSNRLTH---VDLSLIPSLFHANVSYNLLST-----LAIPIAV 207
Query: 330 EYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGE 389
E LD S N + N V + V+L L L HN L+ L N L E+DLS+N L +
Sbjct: 208 EELDASHNSI-NVVRGPVN--VELTILKLQHNNLTDTA--WLLNYPGLVEVDLSYNELEK 262
Query: 390 KISSRICRMESLEKLNLSYNNLSGL 414
+ +M+ LE+L +S N L L
Sbjct: 263 IMYHPFVKMQRLERLYISNNRLVAL 287
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 103/252 (40%), Gaps = 39/252 (15%)
Query: 174 PHEVGQLNFLNHLILDSNFLGGSIPRSL-SNFTNLVFLYLYNNSFSGSIPQQIGNLKSLF 232
PH + L L+L+ N L S+PR + N L L + NN+ SL
Sbjct: 110 PHVFQNVPLLTVLVLERNDL-SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQ 168
Query: 233 DMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNI-TGNIPFEIGESPQLQYLDLSSNYI 291
+++L N+L +D P L +VS N + T IP + E LD S N I
Sbjct: 169 NLQLSSNRLTH-----VDLSLIPSLFHANVSYNLLSTLAIPIAVEE------LDASHNSI 217
Query: 292 ---VGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLG 348
G + +L I+ L +L+ PG L +DLS N L +
Sbjct: 218 NVVRGPVNVELT-ILKLQHNNLTDTAWLLNYPG-------LVEVDLSYNELEKIMYHPFV 269
Query: 349 SLVKLYYLNLSHNKL------SQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLE 402
+ +L L +S+N+L Q IP L LDLSHN L + + + LE
Sbjct: 270 KMQRLERLYISNNRLVALNLYGQPIPT-------LKVLDLSHNHLLH-VERNQPQFDRLE 321
Query: 403 KLNLSYNNLSGL 414
L L +N++ L
Sbjct: 322 NLYLDHNSIVTL 333
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 79/196 (40%), Gaps = 24/196 (12%)
Query: 257 LSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLS 316
L+L D+ I I + + +Q L + N I P N+ L + L N LS
Sbjct: 74 LNLNDLQIEEIDT---YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS 130
Query: 317 GRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIH 376
G + L L +S N+L ++ + L L LS N+L+ + +L H
Sbjct: 131 SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFH 190
Query: 377 ----------------LSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFE 420
+ ELD SHN + + +E L L L +NNL+
Sbjct: 191 ANVSYNLLSTLAIPIAVEELDASHNSIN--VVRGPVNVE-LTILKLQHNNLTD--TAWLL 245
Query: 421 ELHGLLHIDISYNKLE 436
GL+ +D+SYN+LE
Sbjct: 246 NYPGLVEVDLSYNELE 261
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ +++ D+ +N+L+D V+DF AK + W L GT +APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEALAPEI 209
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGT--HGNVAPELAYTMKVT 657
+VH D++++N+L+ G + +SDF +++ + + S + G +A E + T
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 658 EKCDVYSFGVLALEVI 673
+ DV+SFGVL E++
Sbjct: 231 TQSDVWSFGVLLWEIV 246
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 15/119 (12%)
Query: 326 LINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHN 385
L NLEYL+L+ N +++ + L +LVKL L + NK++ ++ NL +L EL
Sbjct: 65 LTNLEYLNLNGNQITD--ISPLSNLVKLTNLYIGTNKITDISALQ--NLTNLREL----- 115
Query: 386 FLGEKISSRICRMESLEK---LNLSYN-NLSGLIPRCFEELHGLLHIDISYNKLEGHIP 440
+L E S I + +L K LNL N NLS L P GL ++ ++ +K++ P
Sbjct: 116 YLNEDNISDISPLANLTKXYSLNLGANHNLSDLSP--LSNXTGLNYLTVTESKVKDVTP 172
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 201 LSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLL 260
L++ T+L + Y N + P + N L +K+ N++ PL+ QL+ L
Sbjct: 195 LASLTSLHYFTAYVNQITDITP--VANXTRLNSLKIGNNKITDLSPLA----NLSQLTWL 248
Query: 261 DVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIP 320
++ N I+ + + +L+ L++ SN I +I L N+ LN + L+ N+L
Sbjct: 249 EIGTNQISD--INAVKDLTKLKXLNVGSNQI-SDISV-LNNLSQLNSLFLNNNQLGNEDX 304
Query: 321 GELGSLINLEYLDLSANHLSNFVLESLGSLVK 352
+G L NL L LS NH+++ + L SL K
Sbjct: 305 EVIGGLTNLTTLFLSQNHITD--IRPLASLSK 334
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 28/141 (19%)
Query: 550 IVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
++YE++ G L +K+ + E + + ++ V L ++H N + VH D+ +
Sbjct: 231 MIYEFMSGGELFEKVADEHNKMSE---DEAVEYMRQVCKGLCHMHENNY---VHLDLKPE 284
Query: 609 NV-----------LLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVT 657
N+ L+D G AH+ + K GT APE+A V
Sbjct: 285 NIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT----------TGTAEFAAPEVAEGKPVG 334
Query: 658 EKCDVYSFGVLALEVIKGKHP 678
D++S GVL+ ++ G P
Sbjct: 335 YYTDMWSVGVLSYILLSGLSP 355
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 28/141 (19%)
Query: 550 IVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
++YE++ G L +K+ + E + + ++ V L ++H N + VH D+ +
Sbjct: 125 MIYEFMSGGELFEKVADEHNKMSE---DEAVEYMRQVCKGLCHMHENNY---VHLDLKPE 178
Query: 609 NV-----------LLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVT 657
N+ L+D G AH+ + K GT APE+A V
Sbjct: 179 NIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT----------TGTAEFAAPEVAEGKPVG 228
Query: 658 EKCDVYSFGVLALEVIKGKHP 678
D++S GVL+ ++ G P
Sbjct: 229 YYTDMWSVGVLSYILLSGLSP 249
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 300 GNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLS 359
G + L + LS N+L +P +L L LD+S N L++ L +L L +L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 360 HNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCF 419
N+L P L L +L L++N L E + + +E+L+ L L N+L IP+ F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLYT-IPKGF 191
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Query: 247 LSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLN 306
L +D G P L LD+S N + ++P P L LD+S N + L + L
Sbjct: 70 LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQ 127
Query: 307 RISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKL 363
+ L GN+L PG L LE L L+ N L+ L L L L L N L
Sbjct: 128 ELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 348 GSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLS 407
G+L L L+LSHN+L Q +P+ L L+ LD+S N L + + L++L L
Sbjct: 74 GTLPVLGTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 408 YNNLSGLIPRCFEELHGLLHIDISYNKL 435
N L L P L + ++ N+L
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQL 160
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ +++ D+ +N+L+D V+DF AK + W L GT +APE+
Sbjct: 151 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEI 204
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D ++ GVL E+ G P
Sbjct: 205 ILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
FI E+ + G+L++ + K L L + + + + Y+H+ ++H D+
Sbjct: 110 FIQMEFCDKGTLEQWIEKRRGEK-LDKVLALELFEQITKGVDYIHSK---KLIHRDLKPS 165
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVL 668
N+ L + + DF + L D ++ GT ++PE + ++ D+Y+ G++
Sbjct: 166 NIFLVDTKQVKIGDFGLVTSLKNDGKR-TRSKGTLRYMSPEQISSQDYGKEVDLYALGLI 224
Query: 669 ALEVI 673
E++
Sbjct: 225 LAELL 229
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 211
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 212 VDWWALGVLIYEMAAGYPP 230
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 300 GNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLS 359
G + L + LS N+L +P +L L LD+S N L++ L +L L +L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 360 HNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCF 419
N+L P L L +L L++N L E + + +E+L+ L L N+L IP+ F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLYT-IPKGF 191
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Query: 247 LSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLN 306
L +D G P L LD+S N + ++P P L LD+S N + L + L
Sbjct: 70 LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQ 127
Query: 307 RISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKL 363
+ L GN+L PG L LE L L+ N L+ L L L L L N L
Sbjct: 128 ELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 348 GSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLS 407
G+L L L+LSHN+L Q +P+ L L+ LD+S N L + + L++L L
Sbjct: 74 GTLPVLGTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 408 YNNLSGLIPRCFEELHGLLHIDISYNKL 435
N L L P L + ++ N+L
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQL 160
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ +++ D+ +N+L+D V+DF AK + W L GT +APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEI 209
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 211
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 212 VDWWALGVLIYEMAAGYPP 230
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ +++ D+ +N+L+D V+DF AK + W L GT +APE+
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEI 230
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D ++ GVL E+ G P
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ +++ D+ +N+L+D V+DF AK + W L GT +APE+
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEI 210
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D ++ GVL E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 300 GNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLS 359
G + L + LS N+L +P +L L LD+S N L++ L +L L +L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 360 HNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCF 419
N+L P L L +L L++N L E + + +E+L+ L L N+L IP+ F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLYT-IPKGF 191
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Query: 247 LSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLN 306
L +D G P L LD+S N + ++P P L LD+S N + L + L
Sbjct: 70 LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQ 127
Query: 307 RISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKL 363
+ L GN+L PG L LE L L+ N L+ L L L L L N L
Sbjct: 128 ELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 301 NIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSH 360
I++L+ L L+ +P + +NL+ +L+ L+ G+L L L+LSH
Sbjct: 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTK-------LQVDGTLPVLGTLDLSH 86
Query: 361 NKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFE 420
N+L Q +P+ L L+ LD+S N L + + L++L L N L L P
Sbjct: 87 NQL-QSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLT 145
Query: 421 ELHGLLHIDISYNKL 435
L + ++ N+L
Sbjct: 146 PTPKLEKLSLANNQL 160
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ +++ D+ +N+L+D V+DF AK + W L GT +APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEI 209
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 80/199 (40%), Gaps = 25/199 (12%)
Query: 548 SFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
++++Y LE+G K + L + +A + YL N F +H D+++
Sbjct: 130 TYLLYSRLETG-----------PKHIPLQTLLKFMVDIALGMEYLSNRNF---LHRDLAA 175
Query: 608 KNVLLDLGYEAHVSDFRIAK-FLNLDSSNWSKLAGTHGN-VAPELAYTMKVTEKCDVYSF 665
+N +L V+DF ++K + D ++A +A E T K DV++F
Sbjct: 176 RNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAF 235
Query: 666 GVLALEV-IKGKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCLD 724
GV E+ +G P RL P D ++ IM +SC
Sbjct: 236 GVTMWEIATRGMTP----YPGVQNHEMYDYLLHGHRLKQPE-DCLDELYEIM---YSCWR 287
Query: 725 QNPVSRPTMKRFEVQSKQF 743
+P+ RPT +Q ++
Sbjct: 288 TDPLDRPTFSVLRLQLEKL 306
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 239
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 240 VDWWALGVLIYEMAAGYPP 258
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 300 GNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLS 359
G + L + LS N+L +P +L L LD+S N L++ L +L L +L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 360 HNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCF 419
N+L P L L +L L++N L E + + +E+L+ L L N+L IP+ F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGF 191
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 305 LNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLG-SLVKLYYLNLSHNKL 363
L+R L+ ++ G +P LG+L DLS N L + L LG +L L L++S N+L
Sbjct: 62 LDRAELTKLQVDGTLP-VLGTL------DLSHNQLQSLPL--LGQTLPALTVLDVSFNRL 112
Query: 364 SQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGL 414
+ L L L EL L N L + LEKL+L+ NNL+ L
Sbjct: 113 TSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL 163
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ +++ D+ +N+L+D V+DF AK + W L GT +APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEI 209
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 85/213 (39%), Gaps = 42/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIARVPSG-EIFAVK---KFHSPLPDN------------FCS 543
D++ IG+G G V + R S +++A+K KF + F +
Sbjct: 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 127
Query: 544 HP------------RQSFIVYEYLESGSLDKILNN-DASAKELGWTQRLNVIKGVADALF 590
P R ++V EY+ G L +++N D K W + V AL
Sbjct: 128 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WARFYTA--EVVLALD 182
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLA-GTHGNVAPE 649
+H+ F +H D+ N+LLD ++DF +N + A GT ++PE
Sbjct: 183 AIHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE 239
Query: 650 LAYTMK----VTEKCDVYSFGVLALEVIKGKHP 678
+ + +CD +S GV E++ G P
Sbjct: 240 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 300 GNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLS 359
G + L + LS N+L +P +L L LD+S N L++ L +L L +L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 360 HNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCF 419
N+L P L L +L L++N L E + + +E+L+ L L N+L IP+ F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLYT-IPKGF 191
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Query: 247 LSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLN 306
L +D G P L LD+S N + ++P P L LD+S N + L + L
Sbjct: 70 LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQ 127
Query: 307 RISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKL 363
+ L GN+L PG L LE L L+ N L+ L L L L L N L
Sbjct: 128 ELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 348 GSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLS 407
G+L L L+LSHN+L Q +P+ L L+ LD+S N L + + L++L L
Sbjct: 74 GTLPVLGTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 408 YNNLSGLIPRCFEELHGLLHIDISYNKL 435
N L L P L + ++ N+L
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQL 160
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 501 NDFDAKHCIGKGGHGSVYIARVPSG----EIFAVKKF-------------HSPLPDNFCS 543
+F+ +G G +G V++ R SG +++A+K H+
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 544 HPRQS-FIV---YEYLESGSLDKILN--------NDASAKELGWTQRLNVIKG-VADALF 590
H RQS F+V Y + L IL+ S +E + + G + AL
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 173
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAK-FLNLDSSNWSKLAGTHGNVAPE 649
+LH I++ DI +N+LLD ++DF ++K F+ ++ GT +AP+
Sbjct: 174 HLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD 230
Query: 650 LAYTMKV--TEKCDVYSFGVLALEVIKGKHP 678
+ + D +S GVL E++ G P
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 300 GNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLS 359
G + L + LS N+L +P +L L LD+S N L++ L +L L +L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 360 HNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCF 419
N+L P L L +L L++N L E + + +E+L+ L L N+L IP+ F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGF 191
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 305 LNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLG-SLVKLYYLNLSHNKL 363
L+R L+ ++ G +P LG+L DLS N L + L LG +L L L++S N+L
Sbjct: 62 LDRAELTKLQVDGTLP-VLGTL------DLSHNQLQSLPL--LGQTLPALTVLDVSFNRL 112
Query: 364 SQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGL 414
+ L L L EL L N L + LEKL+L+ NNL+ L
Sbjct: 113 TSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL 163
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ +++ D+ +N+L+D V+DF AK + W L GT +APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEI 209
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ +++ D+ +N+L+D V+DF AK + W L GT +APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEI 209
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 300 GNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLS 359
G + L + LS N+L +P +L L LD+S N L++ L +L L +L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 360 HNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCF 419
N+L P L L +L L++N L E + + +E+L+ L L N+L IP+ F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNDLTELPAGLLNGLENLDTLLLQENSLYT-IPKGF 191
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Query: 247 LSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLN 306
L +D G P L LD+S N + ++P P L LD+S N + L + L
Sbjct: 70 LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQ 127
Query: 307 RISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKL 363
+ L GN+L PG L LE L L+ N L+ L L L L L N L
Sbjct: 128 ELYLKGNELKTLPPGLLTPTPKLEKLSLANNDLTELPAGLLNGLENLDTLLLQENSL 184
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 305 LNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLG-SLVKLYYLNLSHNKL 363
L+R L+ ++ G +P LG+L DLS N L + L LG +L L L++S N+L
Sbjct: 62 LDRCELTKLQVDGTLP-VLGTL------DLSHNQLQSLPL--LGQTLPALTVLDVSFNRL 112
Query: 364 SQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGL 414
+ L L L EL L N L + LEKL+L+ N+L+ L
Sbjct: 113 TSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNDLTEL 163
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ +++ D+ +N+L+D V+DF AK + W L GT +APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEI 209
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ +++ D+ +N+L+D V+DF AK + W L GT +APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEI 209
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ +++ D+ +N+L+D V+DF AK + W L GT +APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEI 209
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGT--HGNVAPELAYTMKVT 657
+VH D++++N+L+ G + +SDF +++ + + S + G +A E + T
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 658 EKCDVYSFGVLALEVI 673
+ DV+SFGVL E++
Sbjct: 231 TQSDVWSFGVLLWEIV 246
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 85/213 (39%), Gaps = 42/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIARVPSG-EIFAVK---KFHSPLPDN------------FCS 543
D++ IG+G G V + R S +++A+K KF + F +
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 544 HP------------RQSFIVYEYLESGSLDKILNN-DASAKELGWTQRLNVIKGVADALF 590
P R ++V EY+ G L +++N D K W + V AL
Sbjct: 133 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WARFYTA--EVVLALD 187
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLA-GTHGNVAPE 649
+H+ F +H D+ N+LLD ++DF +N + A GT ++PE
Sbjct: 188 AIHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE 244
Query: 650 LAYTMK----VTEKCDVYSFGVLALEVIKGKHP 678
+ + +CD +S GV E++ G P
Sbjct: 245 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ +++ D+ +N+L+D V+DF AK + W L GT +APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LXGTPEYLAPEI 209
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ +++ D+ +N+L+D V+DF AK + W L GT +APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEI 209
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 300 GNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLS 359
G + L + LS N+L +P +L L LD+S N L++ L +L L +L L L
Sbjct: 75 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 133
Query: 360 HNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCF 419
N+L P L L +L L++N L E + + +E+L+ L L N+L IP+ F
Sbjct: 134 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGF 192
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Query: 247 LSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLN 306
L +D G P L LD+S N + ++P P L LD+S N + L + L
Sbjct: 71 LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQ 128
Query: 307 RISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKL 363
+ L GN+L PG L LE L L+ N+L+ L L L L L N L
Sbjct: 129 ELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 185
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 305 LNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLG-SLVKLYYLNLSHNKL 363
L+R L+ ++ G +P LG+L DLS N L + L LG +L L L++S N+L
Sbjct: 63 LDRCELTKLQVDGTLP-VLGTL------DLSHNQLQSLPL--LGQTLPALTVLDVSFNRL 113
Query: 364 SQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGL 414
+ L L L EL L N L + LEKL+L+ NNL+ L
Sbjct: 114 TSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL 164
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 13/133 (9%)
Query: 540 NFCSHPRQSFIVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 598
F R ++V E G L D+I+ ++ ++K V YLH +
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEIILR----QKFSEVDAAVIMKQVLSGTTYLHKH--- 123
Query: 599 PIVHWDISSKNVLLDLGYEA---HVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMK 655
IVH D+ +N+LL+ + DF ++ + +L GT +APE+ K
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL-GTAYYIAPEV-LRKK 181
Query: 656 VTEKCDVYSFGVL 668
EKCDV+S GV+
Sbjct: 182 YDEKCDVWSCGVI 194
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 85/213 (39%), Gaps = 42/213 (19%)
Query: 500 TNDFDAKHCIGKGGHGSVYIARVPSG-EIFAVK---KFHSPLPDN------------FCS 543
D++ IG+G G V + R S +++A+K KF + F +
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 544 HP------------RQSFIVYEYLESGSLDKILNN-DASAKELGWTQRLNVIKGVADALF 590
P R ++V EY+ G L +++N D K W + V AL
Sbjct: 133 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WARFYTA--EVVLALD 187
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLA-GTHGNVAPE 649
+H+ F +H D+ N+LLD ++DF +N + A GT ++PE
Sbjct: 188 AIHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE 244
Query: 650 LAYTMK----VTEKCDVYSFGVLALEVIKGKHP 678
+ + +CD +S GV E++ G P
Sbjct: 245 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+++D V+DF +AK + W L GT +APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 300 GNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLS 359
G + L + LS N+L +P +L L LD+S N L++ L +L L +L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 360 HNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCF 419
N+L P L L +L L++N L E + + +E+L+ L L N+L IP+ F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGF 191
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 67/157 (42%), Gaps = 10/157 (6%)
Query: 305 LNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLG-SLVKLYYLNLSHNKL 363
L+R L+ ++ G +P LG+L DLS N L + L LG +L L L++S N+L
Sbjct: 62 LDRAELTKLQVDGTLP-VLGTL------DLSHNQLQSLPL--LGQTLPALTVLDVSFNRL 112
Query: 364 SQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELH 423
+ L L L EL L N L + LEKL+L+ NNL+ L L
Sbjct: 113 TSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLE 172
Query: 424 GLLHIDISYNKLEGHIPNSTTFRDAPLEALQGNKGLC 460
L + + N L P L GN LC
Sbjct: 173 NLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLC 209
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ +++ D+ +N+L+D V+DF AK + W L GT +APE+
Sbjct: 143 YLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEI 196
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D ++ GVL E+ G P
Sbjct: 197 ILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 276 GESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLS 335
G + ++ LDLS+N I + L + L + L+ N ++ SL +LE+LDLS
Sbjct: 49 GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 108
Query: 336 ANHLSNFVLESLGSLVKLYYLNLSHN 361
N+LSN L L +LNL N
Sbjct: 109 YNYLSNLSSSWFKPLSSLTFLNLLGN 134
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 52/125 (41%), Gaps = 3/125 (2%)
Query: 91 LTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTN--KLSGH 148
LTS +N T+ E SFSS L +LDL N L ++ LS L +L+ L N K G
Sbjct: 83 LTSNGIN-TIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGE 141
Query: 149 IPSEXXXXXXXXXXXXXRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLV 208
+ + L FL L +D++ L P+SL + N+
Sbjct: 142 TSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVS 201
Query: 209 FLYLY 213
L L+
Sbjct: 202 HLILH 206
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 356 LNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLI 415
L+LS+N+++ +L ++L L L+ N + + SLE L+LSYN LS L
Sbjct: 57 LDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLS 116
Query: 416 PRCFEELHGLLHIDI 430
F+ L L +++
Sbjct: 117 SSWFKPLSSLTFLNL 131
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 380 LDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKL 435
LDLS+N + +S + R +L+ L L+ N ++ + F L L H+D+SYN L
Sbjct: 57 LDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYL 112
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L A + L + + IK + D + YLH I H+D+ +N
Sbjct: 92 LILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPEN 145
Query: 610 V-LLDLGYE-AHVS--DFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD H+ DF +A + D + + GT VAPE+ + + D++S
Sbjct: 146 IMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 204
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 205 GVITYILLSGASP 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L A + L + + IK + D + YLH I H+D+ +N
Sbjct: 92 LILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPEN 145
Query: 610 V-LLDLGYE-AHVS--DFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD H+ DF +A + D + + GT VAPE+ + + D++S
Sbjct: 146 IMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 204
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 205 GVITYILLSGASP 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L A + L + + IK + D + YLH I H+D+ +N
Sbjct: 92 LILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPEN 145
Query: 610 V-LLDLGYE-AHVS--DFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD H+ DF +A + D + + GT VAPE+ + + D++S
Sbjct: 146 IMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 204
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 205 GVITYILLSGASP 217
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
++ AL YL + F VH DI+++NVL+ + DF +++++ DS+ G
Sbjct: 120 LSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLP 175
Query: 644 -GNVAPELAYTMKVTEKCDVYSFGVLALEVI 673
+APE + T DV+ FGV E++
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 300 GNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLS 359
G + L + LS N+L +P +L L LD+S N L++ L +L L +L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 360 HNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCF 419
N+L P L L +L L++N L E + + +E+L+ L L N+L IP+ F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGF 191
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Query: 247 LSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLN 306
L +D G P L LD+S N + ++P P L LD+S N + L + L
Sbjct: 70 LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQ 127
Query: 307 RISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKL 363
+ L GN+L PG L LE L L+ N+L+ L L L L L N L
Sbjct: 128 ELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 67/157 (42%), Gaps = 10/157 (6%)
Query: 305 LNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLG-SLVKLYYLNLSHNKL 363
L+R L+ ++ G +P LG+L DLS N L + L LG +L L L++S N+L
Sbjct: 62 LDRCELTKLQVDGTLP-VLGTL------DLSHNQLQSLPL--LGQTLPALTVLDVSFNRL 112
Query: 364 SQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELH 423
+ L L L EL L N L + LEKL+L+ NNL+ L L
Sbjct: 113 TSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLE 172
Query: 424 GLLHIDISYNKLEGHIPNSTTFRDAPLEALQGNKGLC 460
L + + N L P L GN LC
Sbjct: 173 NLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLC 209
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 68/149 (45%), Gaps = 24/149 (16%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILN-------------NDASAKELGWTQRLNVIKGVADA 588
C+ +++ Y G+L + L N +++ + ++ +A
Sbjct: 110 CTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARG 169
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN--- 645
+ YL + +H D++++NVL+ ++DF +A+ +N + ++ K T+G
Sbjct: 170 MEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDIN--NIDYYK-KTTNGRLPV 223
Query: 646 --VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 276 GESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLS 335
G + ++ LDLS+N I + L + L + L+ N ++ SL +LE+LDLS
Sbjct: 23 GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 82
Query: 336 ANHLSNFVLESLGSLVKLYYLNLSHN 361
N+LSN L L +LNL N
Sbjct: 83 YNYLSNLSSSWFKPLSSLTFLNLLGN 108
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 152/394 (38%), Gaps = 80/394 (20%)
Query: 91 LTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTN--KLSGH 148
LTS +N T+ E SFSS L +LDL N L ++ LS L +L+ L N K G
Sbjct: 57 LTSNGIN-TIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGE 115
Query: 149 IPSEXXXXXXXXXXXXXRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLV 208
+ + L FL L +D++ L P+SL + N+
Sbjct: 116 TSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVS 175
Query: 209 FLYLYNNS-----------------------------FSGSIPQQIGNL----------- 228
L L+ FS + +L
Sbjct: 176 HLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKI 235
Query: 229 --KSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNI----------PFEIG 276
+SLF + +NQ++G + L D D ++N + GN P ++
Sbjct: 236 TDESLFQVMKLLNQISGLLELEFD----------DCTLNGV-GNFRASDNDRVIDPGKV- 283
Query: 277 ESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGS-LINLEYLDLS 335
E+ ++ L + Y+ ++ T + RI++ +K+ +P L L +LEYLDLS
Sbjct: 284 ETLTIRRLHIPRFYLFYDLSTLYSLTERVKRITVENSKV-FLVPCLLSQHLKSLEYLDLS 342
Query: 336 AN-----HLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEK 390
N +L N E ++ L +H ++ L L +L+ +D+S N
Sbjct: 343 ENLMVEEYLKNSACEDAWPSLQTLILRQNHLASLEKTGETLLTLKNLTNIDISKNSFHSM 402
Query: 391 ISSRICRM-ESLEKLNLS---YNNLSGLIPRCFE 420
C+ E ++ LNLS ++++G IP+ E
Sbjct: 403 --PETCQWPEKMKYLNLSSTRIHSVTGCIPKTLE 434
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 380 LDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKL 435
LDLS+N + +S + R +L+ L L+ N ++ + F L L H+D+SYN L
Sbjct: 31 LDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYL 86
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 356 LNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLI 415
L+LS+N+++ +L ++L L L+ N + + SLE L+LSYN LS L
Sbjct: 31 LDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLS 90
Query: 416 PRCFEELHGLLHIDI 430
F+ L L +++
Sbjct: 91 SSWFKPLSSLTFLNL 105
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L A + L + + IK + D + YLH I H+D+ +N
Sbjct: 92 LILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPEN 145
Query: 610 V-LLDLGYE-AHVS--DFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD H+ DF +A + D + + GT VAPE+ + + D++S
Sbjct: 146 IMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 204
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 205 GVITYILLSGASP 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L A + L + + IK + D + YLH I H+D+ +N
Sbjct: 92 LILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPEN 145
Query: 610 V-LLDLGYE-AHVS--DFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD H+ DF +A + D + + GT VAPE+ + + D++S
Sbjct: 146 IMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 204
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 205 GVITYILLSGASP 217
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN-----VAPELAYTMK 655
+H D++++NVL+ ++DF +A+ +N + ++ K T+G +APE +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLARDIN--NIDYYK-KTTNGRLPVKWMAPEALFDRV 235
Query: 656 VTEKCDVYSFGVLALEV 672
T + DV+SFGVL E+
Sbjct: 236 YTHQSDVWSFGVLMWEI 252
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+L+D V+DF AK + W L GT +APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+++D V+DF +AK + W L GT +APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+++D V+DF AK + W L GT +APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L A + L + + IK + D + YLH I H+D+ +N
Sbjct: 92 LILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPEN 145
Query: 610 V-LLDLGYE-AHVS--DFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD H+ DF +A + D + + GT VAPE+ + + D++S
Sbjct: 146 IMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 204
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 205 GVITYILLSGASP 217
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 27/144 (18%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNC--------FPPI 600
+++ + + GSL L + + W + +V + ++ L YLH + P I
Sbjct: 89 WLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSI 144
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTE-- 658
H D SKNVLL A ++DF +A THG V +V E
Sbjct: 145 AHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPP----GDTHGQVGTRRYMAPEVLEGA 200
Query: 659 ---------KCDVYSFGVLALEVI 673
+ D+Y+ G++ E++
Sbjct: 201 INFQRDAFLRIDMYAMGLVLWELV 224
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L S E TQ +K + D + YLH+ I H+D+ +N
Sbjct: 92 LILELVSGGELFDFLAEKESLTEDEATQ---FLKQILDGVHYLHSK---RIAHFDLKPEN 145
Query: 610 V-LLDLGY---EAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD + DF IA + + + + GT VAPE+ + + D++S
Sbjct: 146 IMLLDKNVPNPRIKLIDFGIAHKIEA-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 204
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 205 GVITYILLSGASP 217
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 600 IVHWDISSKNVLLD---LGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKV 656
IVH D+ +N+LL G ++DF +A + + W AGT G ++PE+
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPY 210
Query: 657 TEKCDVYSFGVLALEVIKGKHP 678
+ D+++ GV+ ++ G P
Sbjct: 211 GKPVDIWACGVILYILLVGYPP 232
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ +++ D+ +N+++D V+DF AK + W L GT +APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEI 209
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D ++ GVL E+ G P
Sbjct: 210 IISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L S E TQ +K + D + YLH+ I H+D+ +N
Sbjct: 85 LILELVSGGELFDFLAEKESLTEDEATQ---FLKQILDGVHYLHSK---RIAHFDLKPEN 138
Query: 610 V-LLDLGY---EAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD + DF IA + + + + GT VAPE+ + + D++S
Sbjct: 139 IMLLDKNVPNPRIKLIDFGIAHKIEA-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 197
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 198 GVITYILLSGASP 210
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L S E TQ +K + D + YLH+ I H+D+ +N
Sbjct: 106 LILELVSGGELFDFLAEKESLTEDEATQ---FLKQILDGVHYLHSK---RIAHFDLKPEN 159
Query: 610 V-LLDLGY---EAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD + DF IA + + + + GT VAPE+ + + D++S
Sbjct: 160 IMLLDKNVPNPRIKLIDFGIAHKIEA-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 218
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 219 GVITYILLSGASP 231
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 580 NVIKGVADALFYLHNNCFPPIVHWDISSKNVLLD---LGYEAHVSDFRIAKFLNLDSSNW 636
+ I+ + +A+ + H +VH D+ +N+LL G ++DF +A + + W
Sbjct: 125 HCIQQILEAVLHCHQM---GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW 181
Query: 637 SKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
AGT G ++PE+ + D+++ GV+ ++ G P
Sbjct: 182 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 79/172 (45%), Gaps = 14/172 (8%)
Query: 243 GAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNI 302
++P I + P+L+ L +S NN+ + LQ L LSSN + L I
Sbjct: 136 SSLPRGI-FHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH---VDLSLI 191
Query: 303 IYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNK 362
L ++S N LS L I +E LD S N + N V + V+L L L HN
Sbjct: 192 PSLFHANVSYNLLST-----LAIPIAVEELDASHNSI-NVVRGPVN--VELTILKLQHNN 243
Query: 363 LSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGL 414
L+ L N L E+DLS+N L + + +M+ LE+L +S N L L
Sbjct: 244 LTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL 293
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 174 PHEVGQLNFLNHLILDSNFLGGSIPRSL-SNFTNLVFLYLYNNSFSGSIPQQIGNLKSLF 232
PH + L L+L+ N L S+PR + N L L + NN+ SL
Sbjct: 116 PHVFQNVPLLTVLVLERNDL-SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQ 174
Query: 233 DMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNI-TGNIPFEIGESPQLQYLDLSSNYI 291
+++L N+L +D P L +VS N + T IP + E LD S N I
Sbjct: 175 NLQLSSNRLT-----HVDLSLIPSLFHANVSYNLLSTLAIPIAVEE------LDASHNSI 223
Query: 292 ---VGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLG 348
G + +L I+ L +L+ PG L +DLS N L +
Sbjct: 224 NVVRGPVNVELT-ILKLQHNNLTDTAWLLNYPG-------LVEVDLSYNELEKIMYHPFV 275
Query: 349 SLVKLYYLNLSHNKL------SQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLE 402
+ +L L +S+N+L Q IP L LDLSHN L + + + LE
Sbjct: 276 KMQRLERLYISNNRLVALNLYGQPIPT-------LKVLDLSHNHLLH-VERNQPQFDRLE 327
Query: 403 KLNLSYNNLSGLIPRCFEELHGLLHIDISYN 433
L L +N++ L H L ++ +S+N
Sbjct: 328 NLYLDHNSIVTL---KLSTHHTLKNLTLSHN 355
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 79/196 (40%), Gaps = 24/196 (12%)
Query: 257 LSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLS 316
L+L D+ I I + + +Q L + N I P N+ L + L N LS
Sbjct: 80 LNLNDLQIEEIDT---YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS 136
Query: 317 GRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIH 376
G + L L +S N+L ++ + L L LS N+L+ + +L H
Sbjct: 137 SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFH 196
Query: 377 ----------------LSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFE 420
+ ELD SHN + + +E L L L +NNL+
Sbjct: 197 ANVSYNLLSTLAIPIAVEELDASHNSIN--VVRGPVNVE-LTILKLQHNNLTDTA--WLL 251
Query: 421 ELHGLLHIDISYNKLE 436
GL+ +D+SYN+LE
Sbjct: 252 NYPGLVEVDLSYNELE 267
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLA-GTHGNVAPELAYTMKVTE- 658
VH DI N+LLD ++DF L D + S +A GT ++PE+ +
Sbjct: 184 VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPG 243
Query: 659 ------KCDVYSFGVLALEVIKGKHP 678
+CD ++ GV A E+ G+ P
Sbjct: 244 TGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+++D V+DF AK + W L GT +APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+++D V+DF AK + W L GT +APE+ + +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+++D V+DF AK + W L GT +APE+ + +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 313 NKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIEL- 371
N+++ PG SL L YL+L+ N L+ + L KL +L L N+L + IP+ +
Sbjct: 50 NQITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDKLTKLTHLALHINQL-KSIPMGVF 108
Query: 372 DNLIHLSELDLSHN 385
DNL L+ + L +N
Sbjct: 109 DNLKSLTHIYLFNN 122
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+++D V+DF AK + W L GT +APE+ + +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+++D V+DF AK + W L GT +APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ +++ D+ +N+L+D V+DF AK + W L GT +APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPEI 209
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D ++ GVL ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
+++ D+ +N+++D V+DF AK + W L GT +APE+ + +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 660 CDVYSFGVLALEVIKGKHP 678
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 545 PRQSFIVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHW 603
P + +V E + G L D+I+ ++ + +K + +A+ YLH N IVH
Sbjct: 120 PTEISLVLELVTGGELFDRIVEKGYYSER----DAADAVKQILEAVAYLHENG---IVHR 172
Query: 604 DISSKNVLLDL---GYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKC 660
D+ +N+L ++DF ++K + + GT G APE+ +
Sbjct: 173 DLKPENLLYATPAPDAPLKIADFGLSKIVE-HQVLMKTVCGTPGYCAPEILRGCAYGPEV 231
Query: 661 DVYSFGVLALEVIKGKHP 678
D++S G++ ++ G P
Sbjct: 232 DMWSVGIITYILLCGFEP 249
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 12/135 (8%)
Query: 549 FIVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISS 607
++V E + G L DKIL K + V+ + + YLH +VH D+
Sbjct: 92 YVVTELXKGGELLDKILRQ----KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKP 144
Query: 608 KNVLL--DLG--YEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVY 663
N+L + G + DF AK L ++ T VAPE+ CD++
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIW 204
Query: 664 SFGVLALEVIKGKHP 678
S GVL + G P
Sbjct: 205 SLGVLLYTXLTGYTP 219
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 10/133 (7%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
++V+E + G + ++ +++ ++IKG+ YLH + I+H DI
Sbjct: 114 YMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIE----YLH---YQKIIHRDIKPS 166
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE-LAYTMKV--TEKCDVYSF 665
N+L+ ++DF ++ + S GT +APE L+ T K+ + DV++
Sbjct: 167 NLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAM 226
Query: 666 GVLALEVIKGKHP 678
GV + G+ P
Sbjct: 227 GVTLYCFVFGQCP 239
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
+AD + YL+ N F VH D++++N ++ + + DF + + ++ +++ + G
Sbjct: 134 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGL 188
Query: 644 ---GNVAPELAYTMKVTEKCDVYSFGVLALEV 672
++PE T DV+SFGV+ E+
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
+AD + YL+ N F VH D++++N ++ + + DF + + ++ +++ + G
Sbjct: 169 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGL 223
Query: 644 ---GNVAPELAYTMKVTEKCDVYSFGVLALEV 672
++PE T DV+SFGV+ E+
Sbjct: 224 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
+AD + YL+ N F VH D++++N ++ + + DF + + ++ +++ + G
Sbjct: 141 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGL 195
Query: 644 ---GNVAPELAYTMKVTEKCDVYSFGVLALEV 672
++PE T DV+SFGV+ E+
Sbjct: 196 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 70/189 (37%), Gaps = 20/189 (10%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
+V E GSL L LG R V VA+ + YL + F +H D++++N
Sbjct: 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF---IHRDLAARN 141
Query: 610 VLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-----APELAYTMKVTEKCDVYS 664
+LL + DF + + L + ++ + H V APE T + D +
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHY--VMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 665 FGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCL 723
FGV E+ G+ P RLP P Q+ I V C
Sbjct: 200 FGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEGERLPRPEDCPQD----IYNVMVQCW 252
Query: 724 DQNPVSRPT 732
P RPT
Sbjct: 253 AHKPEDRPT 261
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
+AD + YL+ N F VH D++++N ++ + + DF + + ++ +++ + G
Sbjct: 138 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGL 192
Query: 644 ---GNVAPELAYTMKVTEKCDVYSFGVLALEV 672
++PE T DV+SFGV+ E+
Sbjct: 193 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 59/154 (38%), Gaps = 18/154 (11%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHG 644
VA+ + YL + F +H D++++N+LL + DF + + L + ++ + H
Sbjct: 130 VAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY--VMQEHR 184
Query: 645 NV-----APELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXD 698
V APE T + D + FGV E+ G+ P
Sbjct: 185 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEG 241
Query: 699 SRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
RLP P Q+ I V C P RPT
Sbjct: 242 ERLPRPEDCPQD----IYNVMVQCWAHKPEDRPT 271
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
+AD + YL+ N F VH D++++N ++ + + DF + + ++ +++ + G
Sbjct: 147 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGL 201
Query: 644 ---GNVAPELAYTMKVTEKCDVYSFGVLALEV 672
++PE T DV+SFGV+ E+
Sbjct: 202 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 78/200 (39%), Gaps = 44/200 (22%)
Query: 509 IGKGGHGSVYIAR-VPSGEIFAVKKFHSPLPDNFCS--------------HP-------- 545
IG+G +G V+ R +G+I A+KKF D HP
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 546 ----RQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVA----DALFYLH-NNC 596
R+ +V+EY + L ++ E +++K + A+ + H +NC
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPE-------HLVKSITWQTLQAVNFCHKHNC 123
Query: 597 FPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAY-TMK 655
+H D+ +N+L+ + DF A+ L S + T +PEL +
Sbjct: 124 ----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQ 179
Query: 656 VTEKCDVYSFGVLALEVIKG 675
DV++ G + E++ G
Sbjct: 180 YGPPVDVWAIGCVFAELLSG 199
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
+AD + YL+ N F VH D++++N ++ + + DF + + ++ +++ + G
Sbjct: 140 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGL 194
Query: 644 ---GNVAPELAYTMKVTEKCDVYSFGVLALEV 672
++PE T DV+SFGV+ E+
Sbjct: 195 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
+AD + YL+ N F VH D++++N ++ + + DF + + ++ +++ + G
Sbjct: 147 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGL 201
Query: 644 ---GNVAPELAYTMKVTEKCDVYSFGVLALEV 672
++PE T DV+SFGV+ E+
Sbjct: 202 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 70/189 (37%), Gaps = 20/189 (10%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
+V E GSL L LG R V VA+ + YL + F +H D++++N
Sbjct: 91 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF---IHRDLAARN 145
Query: 610 VLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-----APELAYTMKVTEKCDVYS 664
+LL + DF + + L + ++ + H V APE T + D +
Sbjct: 146 LLLATRDLVKIGDFGLMRALPQNDDHY--VMQEHRKVPFAWCAPESLKTRTFSHASDTWM 203
Query: 665 FGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCL 723
FGV E+ G+ P RLP P Q+ I V C
Sbjct: 204 FGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEGERLPRPEDCPQD----IYNVMVQCW 256
Query: 724 DQNPVSRPT 732
P RPT
Sbjct: 257 AHKPEDRPT 265
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
+AD + YL+ N F VH D++++N ++ + + DF + + ++ +++ + G
Sbjct: 140 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGL 194
Query: 644 ---GNVAPELAYTMKVTEKCDVYSFGVLALEV 672
++PE T DV+SFGV+ E+
Sbjct: 195 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 303 IYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNK 362
+ LN + +S KL+G IP +L +N +LD N + LE L KLY L L HN+
Sbjct: 172 LKLNYLRISEAKLTG-IPKDLPETLNELHLD--HNKIQAIELEDLLRYSKLYRLGLGHNQ 228
Query: 363 LSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLS 412
+ L L L EL L +N L ++ + + ++ L+ + L NN++
Sbjct: 229 IRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNIT 277
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
+AD + YL+ N F VH D++++N ++ + + DF + + ++ ++ + G
Sbjct: 132 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXXRKGGKGL 186
Query: 644 ---GNVAPELAYTMKVTEKCDVYSFGVLALEV 672
++PE T DV+SFGV+ E+
Sbjct: 187 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
+AD + YL+ N F VH D++++N ++ + + DF + + ++ ++ + G
Sbjct: 141 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXXRKGGKGL 195
Query: 644 ---GNVAPELAYTMKVTEKCDVYSFGVLALEV 672
++PE T DV+SFGV+ E+
Sbjct: 196 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
+AD + YL+ N F VH D++++N ++ + + DF + + ++ +++ + G
Sbjct: 137 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGL 191
Query: 644 ---GNVAPELAYTMKVTEKCDVYSFGVLALEV 672
++PE T DV+SFGV+ E+
Sbjct: 192 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+V EY + D I+ D +++ + + + A+ Y H + IVH D+ +
Sbjct: 80 IMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---KIVHRDLKPE 132
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE-LAYTMKVTEKCDVYSFGV 667
N+LLD ++DF ++ + D + G+ APE ++ + + DV+S GV
Sbjct: 133 NLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGV 191
Query: 668 LALEVIKGKHPRD 680
+ ++ + P D
Sbjct: 192 ILYVMLCRRLPFD 204
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 9/142 (6%)
Query: 540 NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP 599
+ + P +V EY D I+ ++ G + + A+ Y H +
Sbjct: 76 DVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGR----RFFQQIICAIEYCHRH---K 128
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAY-TMKVTE 658
IVH D+ +N+LLD ++DF ++ + D + G+ APE+ +
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVINGKLYAGP 187
Query: 659 KCDVYSFGVLALEVIKGKHPRD 680
+ DV+S G++ ++ G+ P D
Sbjct: 188 EVDVWSCGIVLYVMLVGRLPFD 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 59/154 (38%), Gaps = 18/154 (11%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHG 644
VA+ + YL + F +H D++++N+LL + DF + + L + ++ + H
Sbjct: 124 VAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY--VMQEHR 178
Query: 645 NV-----APELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXD 698
V APE T + D + FGV E+ G+ P
Sbjct: 179 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEG 235
Query: 699 SRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
RLP P Q+ I V C P RPT
Sbjct: 236 ERLPRPEDCPQD----IYNVMVQCWAHKPEDRPT 265
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 70/189 (37%), Gaps = 20/189 (10%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
+V E GSL L LG R V VA+ + YL + F +H D++++N
Sbjct: 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF---IHRDLAARN 141
Query: 610 VLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-----APELAYTMKVTEKCDVYS 664
+LL + DF + + L + ++ + H V APE T + D +
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHY--VMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 665 FGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCL 723
FGV E+ G+ P RLP P Q+ I V C
Sbjct: 200 FGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEGERLPRPEDCPQD----IYNVMVQCW 252
Query: 724 DQNPVSRPT 732
P RPT
Sbjct: 253 AHKPEDRPT 261
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 24/149 (16%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILN-------------NDASAKELGWTQRLNVIKGVADA 588
C+ +++ EY G+L + L + ++L ++ VA
Sbjct: 144 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARG 203
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN--- 645
+ YL + +H D++++NVL+ ++DF +A+ ++ ++ K T+G
Sbjct: 204 MEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK-KTTNGRLPV 257
Query: 646 --VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 258 KWMAPEALFDRIYTHQSDVWSFGVLLWEI 286
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+V EY + D I+ D +++ + + + A+ Y H + IVH D+ +
Sbjct: 84 IMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---KIVHRDLKPE 136
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE-LAYTMKVTEKCDVYSFGV 667
N+LLD ++DF ++ + D + G+ APE ++ + + DV+S GV
Sbjct: 137 NLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGV 195
Query: 668 LALEVIKGKHPRD 680
+ ++ + P D
Sbjct: 196 ILYVMLCRRLPFD 208
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 26/150 (17%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILN-------------NDASAKELGWTQRLNVIKGVADA 588
C+ +++ EY G+L + L + ++L ++ VA
Sbjct: 103 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARG 162
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN-LDSSNWSKLAGTHGN-- 645
+ YL + +H D++++NVL+ ++DF +A+ ++ +D + T+G
Sbjct: 163 MEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT----TNGRLP 215
Query: 646 ---VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L S E T+ +K + + ++YLH+ I H+D+ +N
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATE---FLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 610 V-LLDLGY---EAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD + DF +A ++ + + + GT VAPE+ + + D++S
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSI 203
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 204 GVITYILLSGASP 216
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 282 QYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSN 341
Q L L++N I P +++ L ++ + NKL+ G L L LDL+ NHL +
Sbjct: 36 QRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKS 95
Query: 342 F---VLESLGSLVKLYYLN 357
++L SL +Y N
Sbjct: 96 IPRGAFDNLKSLTHIYLYN 114
Score = 35.0 bits (79), Expect = 0.17, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 307 RISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQ 366
R+ L+ N+++ PG L+NL+ L ++N L+ L +L L+L+ N L
Sbjct: 37 RLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSI 96
Query: 367 IPIELDNLIHLSELDLSHN 385
DNL L+ + L +N
Sbjct: 97 PRGAFDNLKSLTHIYLYNN 115
Score = 32.3 bits (72), Expect = 0.93, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 356 LNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLI 415
L L++N++++ P D+L++L +L + N L + ++ L +L+L+ N+L +
Sbjct: 38 LWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIP 97
Query: 416 PRCFEELHGLLHIDISYN 433
F+ L L HI + N
Sbjct: 98 RGAFDNLKSLTHIYLYNN 115
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 28/104 (26%)
Query: 116 LYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXXXXRNQLNGSIPH 175
L NN++ + P +L L+ L F +NKL+ +IP
Sbjct: 40 LNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-------------------------AIPT 74
Query: 176 EV-GQLNFLNHLILDSNFLGGSIPR-SLSNFTNLVFLYLYNNSF 217
V +L L L L+ N L SIPR + N +L +YLYNN +
Sbjct: 75 GVFDKLTQLTQLDLNDNHLK-SIPRGAFDNLKSLTHIYLYNNPW 117
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 15/130 (11%)
Query: 547 QSFIVYEYLESGSLDK------ILNNDASAKELGWTQRLN-VIKGVADALFYLHNNCFPP 599
+ +I+YEY+E+ S+ K +L+ + + Q + +IK V ++ Y+HN
Sbjct: 117 EVYIIYEYMENDSILKFDEYFFVLDKNYTC--FIPIQVIKCIIKSVLNSFSYIHNE--KN 172
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTE- 658
I H D+ N+L+D +SDF ++++ S+ GT+ + PE
Sbjct: 173 ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSR--GTYEFMPPEFFSNESSYNG 230
Query: 659 -KCDVYSFGV 667
K D++S G+
Sbjct: 231 AKVDIWSLGI 240
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+V EY + D I+ D +++ + + + A+ Y H + IVH D+ +
Sbjct: 90 IMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---KIVHRDLKPE 142
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE-LAYTMKVTEKCDVYSFGV 667
N+LLD ++DF ++ + D + G+ APE ++ + + DV+S GV
Sbjct: 143 NLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGV 201
Query: 668 LALEVIKGKHPRD 680
+ ++ + P D
Sbjct: 202 ILYVMLCRRLPFD 214
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 26/142 (18%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALFYLHNNCFPPIVHWDIS 606
IV E L+ G L + + +T+R ++K + +A+ YLH+ I H D+
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 149
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN----------VAPELAYTMKV 656
+N+L + R L L ++K +H + VAPE+ K
Sbjct: 150 PENLLY--------TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKY 201
Query: 657 TEKCDVYSFGVLALEVIKGKHP 678
+ CD++S GV+ ++ G P
Sbjct: 202 DKSCDMWSLGVIMYILLCGYPP 223
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+V EY + D I+ D +++ + + + A+ Y H + IVH D+ +
Sbjct: 89 IMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---KIVHRDLKPE 141
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE-LAYTMKVTEKCDVYSFGV 667
N+LLD ++DF ++ + D + G+ APE ++ + + DV+S GV
Sbjct: 142 NLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGV 200
Query: 668 LALEVIKGKHPRD 680
+ ++ + P D
Sbjct: 201 ILYVMLCRRLPFD 213
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 26/142 (18%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALFYLHNNCFPPIVHWDIS 606
IV E L+ G L + + + +T+R ++K + +A+ YLH+ I H D+
Sbjct: 105 LIVMECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 158
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN----------VAPELAYTMKV 656
+N+L + R L L ++K +H + VAPE+ K
Sbjct: 159 PENLLY--------TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKY 210
Query: 657 TEKCDVYSFGVLALEVIKGKHP 678
+ CD++S GV+ ++ G P
Sbjct: 211 DKSCDMWSLGVIMYILLCGYPP 232
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 26/142 (18%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALFYLHNNCFPPIVHWDIS 606
IV E L+ G L + + +T+R ++K + +A+ YLH+ I H D+
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 150
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN----------VAPELAYTMKV 656
+N+L + R L L ++K +H + VAPE+ K
Sbjct: 151 PENLLY--------TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKY 202
Query: 657 TEKCDVYSFGVLALEVIKGKHP 678
+ CD++S GV+ ++ G P
Sbjct: 203 DKSCDMWSLGVIMYILLCGYPP 224
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 26/142 (18%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALFYLHNNCFPPIVHWDIS 606
IV E L+ G L + + +T+R ++K + +A+ YLH+ I H D+
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 148
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN----------VAPELAYTMKV 656
+N+L + R L L ++K +H + VAPE+ K
Sbjct: 149 PENLLY--------TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKY 200
Query: 657 TEKCDVYSFGVLALEVIKGKHP 678
+ CD++S GV+ ++ G P
Sbjct: 201 DKSCDMWSLGVIMYILLCGYPP 222
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 546 RQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605
++ ++V EY G + ++L++ K Q + D L YLH+ IVH DI
Sbjct: 81 QKMYMVMEYCVCG-MQEMLDS-VPEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDI 135
Query: 606 SSKNVLLDLGYEAHVSDFRIAK----FLNLDSSNWSKLAGTHGNVAPELAYTMKVTE--K 659
N+LL G +S +A+ F D+ S+ G+ PE+A + K
Sbjct: 136 KPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ--GSPAFQPPEIANGLDTFSGFK 193
Query: 660 CDVYSFGVLALEVIKGKHP 678
D++S GV + G +P
Sbjct: 194 VDIWSAGVTLYNITTGLYP 212
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 26/142 (18%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALFYLHNNCFPPIVHWDIS 606
IV E L+ G L + + +T+R ++K + +A+ YLH+ I H D+
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAIQYLHSI---NIAHRDVK 143
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN----------VAPELAYTMKV 656
+N+L + R L L ++K +H + VAPE+ K
Sbjct: 144 PENLLY--------TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKY 195
Query: 657 TEKCDVYSFGVLALEVIKGKHP 678
+ CD++S GV+ ++ G P
Sbjct: 196 DKSCDMWSLGVIMYILLCGYPP 217
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 24/149 (16%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILN-------------NDASAKELGWTQRLNVIKGVADA 588
C+ +++ EY G+L + L + ++L ++ VA
Sbjct: 88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARG 147
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN--- 645
+ YL + +H D++++NVL+ ++DF +A+ ++ ++ K T+G
Sbjct: 148 MEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK-KTTNGRLPV 201
Query: 646 --VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 202 KWMAPEALFDRIYTHQSDVWSFGVLLWEI 230
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Query: 554 YLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLD 613
YL + + LNN ++ L ++ + L Y+H+ I+H D+ NV ++
Sbjct: 109 YLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVN 165
Query: 614 LGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT-MKVTEKCDVYSFGVLALEV 672
E + DF +A+ + + + + T APE+ M + D++S G + E+
Sbjct: 166 EDSELRILDFGLARQADEEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 673 IKGK 676
++GK
Sbjct: 223 LQGK 226
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 91/234 (38%), Gaps = 11/234 (4%)
Query: 109 PHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXXXXRNQ 168
P A LDL NN++ +I NL L L + NK+S P +NQ
Sbjct: 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 111
Query: 169 LNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSF--SGSIPQQIG 226
L +P ++ + L L + N + + ++ + L N SG
Sbjct: 112 LK-ELPEKMPKT--LQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ 168
Query: 227 NLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDL 286
+K L +++ + +I G P L+ L + N IT + L L L
Sbjct: 169 GMKKLSYIRIADTNIT-----TIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGL 223
Query: 287 SSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLS 340
S N I L N +L + L+ NKL ++PG L ++ + L N++S
Sbjct: 224 SFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS 276
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 261 DVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIP 320
D+ + + ++P P LDL +N I N+ L+ + L NK+S P
Sbjct: 40 DLGLEKVPKDLP------PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISP 93
Query: 321 GELGSLINLEYLDLSANHLSNF 342
G L+ LE L LS N L
Sbjct: 94 GAFAPLVKLERLYLSKNQLKEL 115
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 26/142 (18%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALFYLHNNCFPPIVHWDIS 606
IV E L+ G L + + +T+R ++K + +A+ YLH+ I H D+
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAIQYLHSI---NIAHRDVK 142
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN----------VAPELAYTMKV 656
+N+L + R L L ++K +H + VAPE+ K
Sbjct: 143 PENLLY--------TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKY 194
Query: 657 TEKCDVYSFGVLALEVIKGKHP 678
+ CD++S GV+ ++ G P
Sbjct: 195 DKSCDMWSLGVIMYILLCGYPP 216
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 24/149 (16%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILN-------------NDASAKELGWTQRLNVIKGVADA 588
C+ +++ EY G+L + L + ++L ++ VA
Sbjct: 103 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARG 162
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN--- 645
+ YL + +H D++++NVL+ ++DF +A+ ++ ++ K T+G
Sbjct: 163 MEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK-KTTNGRLPV 216
Query: 646 --VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 91/234 (38%), Gaps = 11/234 (4%)
Query: 109 PHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEXXXXXXXXXXXXXRNQ 168
P A LDL NN++ +I NL L L + NK+S P +NQ
Sbjct: 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 111
Query: 169 LNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSF--SGSIPQQIG 226
L +P ++ + L L + N + + ++ + L N SG
Sbjct: 112 LK-ELPEKMPKT--LQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ 168
Query: 227 NLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDL 286
+K L +++ + +I G P L+ L + N IT + L L L
Sbjct: 169 GMKKLSYIRIADTNIT-----TIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGL 223
Query: 287 SSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLS 340
S N I L N +L + L+ NKL ++PG L ++ + L N++S
Sbjct: 224 SFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS 276
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 261 DVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIP 320
D+ + + ++P P LDL +N I N+ L+ + L NK+S P
Sbjct: 40 DLGLEKVPKDLP------PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISP 93
Query: 321 GELGSLINLEYLDLSANHLSNF 342
G L+ LE L LS N L
Sbjct: 94 GAFAPLVKLERLYLSKNQLKEL 115
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHG 644
VA + YL + +H D++++NVL+ ++DF +A+ ++ ++ K T+G
Sbjct: 159 VARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK-KTTNG 212
Query: 645 N-----VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTE 658
+H D++++N+LL + DF +A+ + D K +APE + T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 659 KCDVYSFGVLALEV 672
+ DV+SFGVL E+
Sbjct: 230 QSDVWSFGVLLWEI 243
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 24/149 (16%)
Query: 542 CSHPRQSFIVYEYLESGSLDKILNNDAS-------------AKELGWTQRLNVIKGVADA 588
C+ +++ EY G+L + L ++L ++ VA
Sbjct: 103 CTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARG 162
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN--- 645
+ YL + +H D++++NVL+ ++DF +A+ ++ ++ K T+G
Sbjct: 163 MEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK-KTTNGRLPV 216
Query: 646 --VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 58/154 (37%), Gaps = 18/154 (11%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHG 644
VA+ + YL + F +H D++++N+LL + DF + + L + + + H
Sbjct: 130 VAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH--XVMQEHR 184
Query: 645 NV-----APELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXD 698
V APE T + D + FGV E+ G+ P
Sbjct: 185 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEG 241
Query: 699 SRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPT 732
RLP P Q+ I V C P RPT
Sbjct: 242 ERLPRPEDCPQD----IYNVMVQCWAHKPEDRPT 271
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 26/142 (18%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALFYLHNNCFPPIVHWDIS 606
IV E L+ G L + + +T+R ++K + +A+ YLH+ I H D+
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAIQYLHSI---NIAHRDVK 142
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN----------VAPELAYTMKV 656
+N+L + R L L ++K +H + VAPE+ K
Sbjct: 143 PENLLY--------TSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKY 194
Query: 657 TEKCDVYSFGVLALEVIKGKHP 678
+ CD++S GV+ ++ G P
Sbjct: 195 DKSCDMWSLGVIMYILLCGYPP 216
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 21/140 (15%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
F+V++ ++ G L L + E + +++ + + + LH IVH D+ +
Sbjct: 87 FLVFDLMKKGELFDYLTEKVTLSE---KETRKIMRALLEVICALHK---LNIVHRDLKPE 140
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL----------AYTMKVTE 658
N+LLD ++DF + L+ ++ GT +APE+ Y +V
Sbjct: 141 NILLDDDMNIKLTDFGFSCQLD-PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEV-- 197
Query: 659 KCDVYSFGVLALEVIKGKHP 678
D++S GV+ ++ G P
Sbjct: 198 --DMWSTGVIMYTLLAGSPP 215
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 26/142 (18%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALFYLHNNCFPPIVHWDIS 606
IV E L+ G L + + +T+R ++K + +A+ YLH+ I H D+
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 188
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN----------VAPELAYTMKV 656
+N+L + R L L ++K +H + VAPE+ K
Sbjct: 189 PENLLY--------TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKY 240
Query: 657 TEKCDVYSFGVLALEVIKGKHP 678
+ CD++S GV+ ++ G P
Sbjct: 241 DKSCDMWSLGVIMYILLCGYPP 262
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTE 658
+H D++++N+LL + DF +A+ + D K +APE + T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 659 KCDVYSFGVLALEV 672
+ DV+SFGVL E+
Sbjct: 230 QSDVWSFGVLLWEI 243
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 26/142 (18%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALFYLHNNCFPPIVHWDIS 606
IV E L+ G L + + +T+R ++K + +A+ YLH+ I H D+
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAIQYLHSI---NIAHRDVK 144
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN----------VAPELAYTMKV 656
+N+L + R L L ++K +H + VAPE+ K
Sbjct: 145 PENLLY--------TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKY 196
Query: 657 TEKCDVYSFGVLALEVIKGKHP 678
+ CD++S GV+ ++ G P
Sbjct: 197 DKSCDMWSLGVIMYILLCGYPP 218
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHG 644
VA + YL + +H D++++NVL+ ++DF +A+ ++ ++ K T+G
Sbjct: 151 VARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK-KTTNG 204
Query: 645 N-----VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 237
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 26/142 (18%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALFYLHNNCFPPIVHWDIS 606
IV E L+ G L + + +T+R ++K + +A+ YLH+ I H D+
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 144
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN----------VAPELAYTMKV 656
+N+L + R L L ++K +H + VAPE+ K
Sbjct: 145 PENLLY--------TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKY 196
Query: 657 TEKCDVYSFGVLALEVIKGKHP 678
+ CD++S GV+ ++ G P
Sbjct: 197 DKSCDMWSLGVIMYILLCGYPP 218
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 26/142 (18%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALFYLHNNCFPPIVHWDIS 606
IV E L+ G L + + +T+R ++K + +A+ YLH+ I H D+
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 194
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN----------VAPELAYTMKV 656
+N+L + R L L ++K +H + VAPE+ K
Sbjct: 195 PENLLY--------TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKY 246
Query: 657 TEKCDVYSFGVLALEVIKGKHP 678
+ CD++S GV+ ++ G P
Sbjct: 247 DKSCDMWSLGVIMYILLCGYPP 268
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHG 644
VA + YL + +H D++++NVL+ ++DF +A+ ++ ++ K T+G
Sbjct: 152 VARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK-KTTNG 205
Query: 645 N-----VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 238
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 591 YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL 650
YLH+ +++ D+ +N+L+D V+DF AK + W L GT +AP +
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWX-LCGTPEYLAPAI 209
Query: 651 AYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTE 658
+H D++++N+LL + DF +A+ + D K +APE + T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 659 KCDVYSFGVLALEV 672
+ DV+SFGVL E+
Sbjct: 230 QSDVWSFGVLLWEI 243
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 16/135 (11%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQR---LNVIK----GVADALFYLHNNCFPPIVH 602
+V+E++ D L ++ +G T R LN++K + L + H N I+H
Sbjct: 80 LVFEFM-----DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILH 131
Query: 603 WDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPE-LAYTMKVTEKCD 661
D+ +N+L++ + + DF +A+ + + +S T AP+ L + + D
Sbjct: 132 RDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSID 191
Query: 662 VYSFGVLALEVIKGK 676
++S G + E+I GK
Sbjct: 192 IWSCGCILAEMITGK 206
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L S E T+ L K + + ++YLH+ I H+D+ +N
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFL---KQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 610 V-LLDLGY---EAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD + DF +A ++ + + + GT VAPE+ + + D++S
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 204 GVITYILLSGASP 216
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHG 644
VA + YL + +H D++++NVL+ ++DF +A+ ++ ++ K T+G
Sbjct: 148 VARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK-KTTNG 201
Query: 645 N-----VAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 234
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTE 658
+H D++++N+LL + DF +A+ + D K +APE + T
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 220
Query: 659 KCDVYSFGVLALEV 672
+ DV+SFGVL E+
Sbjct: 221 QSDVWSFGVLLWEI 234
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 69/189 (36%), Gaps = 20/189 (10%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
+V E GSL L LG R V VA+ + YL + F +H D++++N
Sbjct: 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF---IHRDLAARN 141
Query: 610 VLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV-----APELAYTMKVTEKCDVYS 664
+LL + DF + + L + + + H V APE T + D +
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDH--XVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 665 FGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDSRLPYPSLDVQNKFMSIMQVAFSCL 723
FGV E+ G+ P RLP P Q+ I V C
Sbjct: 200 FGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEGERLPRPEDCPQD----IYNVMVQCW 252
Query: 724 DQNPVSRPT 732
P RPT
Sbjct: 253 AHKPEDRPT 261
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTE 658
+H D++++N+LL + DF +A+ + D K +APE + T
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 220
Query: 659 KCDVYSFGVLALEV 672
+ DV+SFGVL E+
Sbjct: 221 QSDVWSFGVLLWEI 234
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L S E T+ L K + + ++YLH+ I H+D+ +N
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFL---KQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 610 V-LLDLGY---EAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD + DF +A ++ + + + GT VAPE+ + + D++S
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 204 GVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L S E T+ L K + + ++YLH+ I H+D+ +N
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFL---KQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 610 V-LLDLGY---EAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD + DF +A ++ + + + GT VAPE+ + + D++S
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 204 GVITYILLSGASP 216
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Query: 288 SNYIVGEIPTQL-GNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLES 346
S+ + ++P L NI LN L+ N+L L LD+ N +S E
Sbjct: 22 SHLKLTQVPDDLPTNITVLN---LTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPEL 78
Query: 347 LGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNL 406
L L LNL HN+LSQ +L+EL L N + + ++ + ++L L+L
Sbjct: 79 CQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 138
Query: 407 SYNNLSG 413
S+N LS
Sbjct: 139 SHNGLSS 145
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 18/192 (9%)
Query: 256 QLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISL---SG 312
+L L+ SI I N PF + L LDLS N G T+LG + L + S
Sbjct: 111 ELHLMSNSIQKIKNN-PF--VKQKNLITLDLSHN---GLSSTKLGTQVQLENLQELLLSN 164
Query: 313 NKLSGRIPGELGSLIN--LEYLDLSANHLSNF---VLESLGSLVKLYYLNLSHN-KLSQQ 366
NK+ EL N L+ L+LS+N + F ++G L L+ N+ L+++
Sbjct: 165 NKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEK 224
Query: 367 IPIELDNLIHLSELDLSHNFLGEKISSRIC--RMESLEKLNLSYNNLSGLIPRCFEELHG 424
+ +EL N + L LS++ L ++ + +L L+LSYNNL+ + F L
Sbjct: 225 LCLELAN-TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQ 283
Query: 425 LLHIDISYNKLE 436
L + + YN ++
Sbjct: 284 LEYFFLEYNNIQ 295
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 308 ISLSGNKLSGRIPGELGSL--INLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQ 365
+SLS ++LS L NL LDLS N+L+ +S L +L Y L +N +
Sbjct: 237 LSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQH 296
Query: 366 QIPIELDNLIHLSELDLSHNFLGEKIS---------SRICRMESLEKLNLSYNNLSGLIP 416
L L ++ L+L +F + IS ++ LE LN+ N++ G+
Sbjct: 297 LFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKS 356
Query: 417 RCFEELHGLLHIDIS 431
F L L ++ +S
Sbjct: 357 NMFTGLINLKYLSLS 371
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 356 LNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRIC-RMESLEKLNLSYNNLSGL 414
LNL+HN+L + L+ LD+ N + K+ +C ++ L+ LNL +N LS L
Sbjct: 40 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTIS-KLEPELCQKLPMLKVLNLQHNELSQL 98
Query: 415 IPRCFEELHGLLHIDISYNKLE 436
+ F L + + N ++
Sbjct: 99 SDKTFAFCTNLTELHLMSNSIQ 120
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 588 ALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVA 647
L Y+H+ I+H D+ NV ++ E + DF +A+ + + + + T A
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY---VATRWYRA 196
Query: 648 PELAYT-MKVTEKCDVYSFGVLALEVIKGK 676
PE+ M + D++S G + E+++GK
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 281 LQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLS 340
L+YL+L I ++P L ++ L + +SGN PG L +L+ L + + +S
Sbjct: 198 LKYLNLGMCNI-KDMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVS 255
Query: 341 NFVLESLGSLVKLYYLNLSHNKLSQQIPIEL-DNLIHLSELDLSHN 385
+ L L LNL+HN LS +P +L L +L EL L HN
Sbjct: 256 LIERNAFDGLASLVELNLAHNNLS-SLPHDLFTPLRYLVELHLHHN 300
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Query: 321 GELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSEL 380
G L NL+YL+L ++ + + +L LV L L +S N + P L L +L
Sbjct: 190 GAFEGLFNLKYLNLGMCNIKD--MPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKL 247
Query: 381 DLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYN 433
+ ++ + + + SL +LNL++NNLS L F L L+ + + +N
Sbjct: 248 WVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHN 300
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 292 VGEIPTQL-GNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSL 350
+ ++P L NI LN L+ N+L L LD+ N +S E L
Sbjct: 21 LTQVPDDLPTNITVLN---LTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKL 77
Query: 351 VKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNN 410
L LNL HN+LSQ +L+EL L N + + ++ + ++L L+LS+N
Sbjct: 78 PMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNG 137
Query: 411 LSG 413
LS
Sbjct: 138 LSS 140
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 18/192 (9%)
Query: 256 QLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISL---SG 312
+L L+ SI I N PF + L LDLS N G T+LG + L + S
Sbjct: 106 ELHLMSNSIQKIKNN-PF--VKQKNLITLDLSHN---GLSSTKLGTQVQLENLQELLLSN 159
Query: 313 NKLSGRIPGELGSLIN--LEYLDLSANHLSNF---VLESLGSLVKLYYLNLSHN-KLSQQ 366
NK+ EL N L+ L+LS+N + F ++G L L+ N+ L+++
Sbjct: 160 NKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEK 219
Query: 367 IPIELDNLIHLSELDLSHNFLGEKISSRIC--RMESLEKLNLSYNNLSGLIPRCFEELHG 424
+ +EL N + L LS++ L ++ + +L L+LSYNNL+ + F L
Sbjct: 220 LCLELAN-TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQ 278
Query: 425 LLHIDISYNKLE 436
L + + YN ++
Sbjct: 279 LEYFFLEYNNIQ 290
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 308 ISLSGNKLSGRIPGELGSL--INLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQ 365
+SLS ++LS L NL LDLS N+L+ +S L +L Y L +N +
Sbjct: 232 LSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQH 291
Query: 366 QIPIELDNLIHLSELDLSHNFLGEKIS---------SRICRMESLEKLNLSYNNLSGLIP 416
L L ++ L+L +F + IS ++ LE LN+ N++ G+
Sbjct: 292 LFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKS 351
Query: 417 RCFEELHGLLHIDIS 431
F L L ++ +S
Sbjct: 352 NMFTGLINLKYLSLS 366
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 356 LNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRIC-RMESLEKLNLSYNNLSGL 414
LNL+HN+L + L+ LD+ N + K+ +C ++ L+ LNL +N LS L
Sbjct: 35 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTIS-KLEPELCQKLPMLKVLNLQHNELSQL 93
Query: 415 IPRCFEELHGLLHIDISYNKLE 436
+ F L + + N ++
Sbjct: 94 SDKTFAFCTNLTELHLMSNSIQ 115
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 21/140 (15%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
F+V++ ++ G L L + E + +++ + + + LH IVH D+ +
Sbjct: 100 FLVFDLMKKGELFDYLTEKVTLSE---KETRKIMRALLEVICALHK---LNIVHRDLKPE 153
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPEL----------AYTMKVTE 658
N+LLD ++DF + L+ ++ GT +APE+ Y +V
Sbjct: 154 NILLDDDMNIKLTDFGFSCQLD-PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEV-- 210
Query: 659 KCDVYSFGVLALEVIKGKHP 678
D++S GV+ ++ G P
Sbjct: 211 --DMWSTGVIMYTLLAGSPP 228
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Query: 288 SNYIVGEIPTQL-GNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLES 346
S+ + ++P L NI LN L+ N+L L LD+ N +S E
Sbjct: 12 SHLKLTQVPDDLPTNITVLN---LTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPEL 68
Query: 347 LGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNL 406
L L LNL HN+LSQ +L+EL L N + + ++ + ++L L+L
Sbjct: 69 CQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128
Query: 407 SYNNLSG 413
S+N LS
Sbjct: 129 SHNGLSS 135
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 18/192 (9%)
Query: 256 QLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISL---SG 312
+L L+ SI I N PF + L LDLS N G T+LG + L + S
Sbjct: 101 ELHLMSNSIQKIKNN-PF--VKQKNLITLDLSHN---GLSSTKLGTQVQLENLQELLLSN 154
Query: 313 NKLSGRIPGELGSLIN--LEYLDLSANHLSNF---VLESLGSLVKLYYLNLSHN-KLSQQ 366
NK+ EL N L+ L+LS+N + F ++G L L+ N+ L+++
Sbjct: 155 NKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEK 214
Query: 367 IPIELDNLIHLSELDLSHNFLGEKISSRIC--RMESLEKLNLSYNNLSGLIPRCFEELHG 424
+ +EL N + L LS++ L ++ + +L L+LSYNNL+ + F L
Sbjct: 215 LCLELAN-TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQ 273
Query: 425 LLHIDISYNKLE 436
L + + YN ++
Sbjct: 274 LEYFFLEYNNIQ 285
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 308 ISLSGNKLSGRIPGELGSL--INLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQ 365
+SLS ++LS L NL LDLS N+L+ +S L +L Y L +N +
Sbjct: 227 LSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQH 286
Query: 366 QIPIELDNLIHLSELDLSHNFLGEKIS---------SRICRMESLEKLNLSYNNLSGLIP 416
L L ++ L+L +F + IS ++ LE LN+ N++ G+
Sbjct: 287 LFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKS 346
Query: 417 RCFEELHGLLHIDIS 431
F L L ++ +S
Sbjct: 347 NMFTGLINLKYLSLS 361
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 356 LNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRIC-RMESLEKLNLSYNNLSGL 414
LNL+HN+L + L+ LD+ N + K+ +C ++ L+ LNL +N LS L
Sbjct: 30 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTIS-KLEPELCQKLPMLKVLNLQHNELSQL 88
Query: 415 IPRCFEELHGLLHIDISYNKLE 436
+ F L + + N ++
Sbjct: 89 SDKTFAFCTNLTELHLMSNSIQ 110
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
+AD + YL+ N F VH D++++N + + + DF + + ++ +++ + G
Sbjct: 134 IADGMAYLNANKF---VHRDLAARNCXVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGL 188
Query: 644 ---GNVAPELAYTMKVTEKCDVYSFGVLALEV 672
++PE T DV+SFGV+ E+
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTE 658
+H D++++N+LL + DF +A+ + D K +APE + T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 659 KCDVYSFGVLALEV 672
+ DV+SFGVL E+
Sbjct: 230 QSDVWSFGVLLWEI 243
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L S E T+ +K + + ++YLH+ I H+D+ +N
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATE---FLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 610 V-LLDLGY---EAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD + DF +A ++ + + + GT VAPE+ + + D++S
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 204 GVITYILLSGASP 216
>pdb|3A79|A Chain A, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
pdb|3A7B|A Chain A, Crystal Structure Of Tlr2-Streptococcus Pneumoniae
Lipoteichoic Acid Complex
pdb|3A7C|A Chain A, Crystal Structure Of Tlr2-Pe-Dtpa Complex
Length = 580
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%)
Query: 276 GESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLS 335
G + ++ LDLS N I L L + L ++++ SL +LE+LDLS
Sbjct: 49 GLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLS 108
Query: 336 ANHLSNFVLESLGSLVKLYYLNLSHN 361
NHLS+ G L L YLNL N
Sbjct: 109 DNHLSSLSSSWFGPLSSLKYLNLMGN 134
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 7/124 (5%)
Query: 554 YLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLD 613
YL + + LNN + L ++ + L Y+H+ I+H D+ NV ++
Sbjct: 101 YLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVN 157
Query: 614 LGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT-MKVTEKCDVYSFGVLALEV 672
E + DF +A+ + + + + T APE+ M + D++S G + E+
Sbjct: 158 EDCELRILDFGLARQADEEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 214
Query: 673 IKGK 676
++GK
Sbjct: 215 LQGK 218
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 87/221 (39%), Gaps = 62/221 (28%)
Query: 509 IGKGGHGSVY--IARVPSGEIFAVKKFHSPLPDNF------------------------- 541
+GKG +G V+ I R +GE+ AVKK ++
Sbjct: 17 LGKGAYGIVWKSIDR-RTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 542 ----CSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF 597
+ R ++V++Y+E+ L+ A L + V+ + + YLH+
Sbjct: 76 NVLRADNDRDVYLVFDYMETD-----LHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG- 129
Query: 598 PPIVHWDISSKNVLLDLGYEAHVSDFRIAK-FLNL--------------------DSSNW 636
++H D+ N+LL+ V+DF +++ F+N+ D
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 637 SKLAGTHGNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGK 676
+ T APE L + K T+ D++S G + E++ GK
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L S E T+ L K + + ++YLH+ I H+D+ +N
Sbjct: 90 LILELVAGGELFDFLAEKESLTEEEATEFL---KQILNGVYYLHS---LQIAHFDLKPEN 143
Query: 610 V-LLDLGY---EAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD + DF +A ++ + + + GT VAPE+ + + D++S
Sbjct: 144 IMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 202
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 203 GVITYILLSGASP 215
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L S E T+ L K + + ++YLH+ I H+D+ +N
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFL---KQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 610 V-LLDLGY---EAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD + DF +A ++ + + + GT VAPE+ + + D++S
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 204 GVITYILLSGASP 216
>pdb|3BZ5|A Chain A, Functional Domain Of Inlj From Listeria Monocytogenes
Includes A Cysteine Ladder
Length = 457
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 249 IDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRI 308
+D + L+ L+ NNIT ++ ++ QL +LD SSN + EI
Sbjct: 185 LDVSQNKLLNRLNCDTNNITK---LDLNQNIQLTFLDCSSNKLT-EI------------- 227
Query: 309 SLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLY-------YLNLSHN 361
++ L L Y D S N L+ + +L L L+ ++L+HN
Sbjct: 228 -------------DVTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHN 274
Query: 362 KLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYN 409
+Q I + + + ELD++HN ++ C+ + +L+LS N
Sbjct: 275 --TQLIYFQAEGCRKIKELDVTHN---TQLYLLDCQAAGITELDLSQN 317
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 35/131 (26%)
Query: 322 ELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLI------ 375
+L NL YL +N L+N + L KL YLN NKL+ ++ + + L+
Sbjct: 80 DLSQNTNLTYLACDSNKLTNL---DVTPLTKLTYLNCDTNKLT-KLDVSQNPLLTYLNCA 135
Query: 376 --HLSELDLSHNF--------LGEKISS-RICRMESLEKLNLSYNNLSGLIPRCFEELHG 424
L+E+D+SHN L +KI+ + L L+ S+N ++ L
Sbjct: 136 RNTLTEIDVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITEL---------- 185
Query: 425 LLHIDISYNKL 435
D+S NKL
Sbjct: 186 ----DVSQNKL 192
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 660 CDVYSFGVLALEVIKG 675
D++S GV+ E+IKG
Sbjct: 206 VDIWSVGVIMGEMIKG 221
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 580 NVIKGVADALFYLHNNCFPPIVHWDISSKNVLLD---LGYEAHVSDFRIAKFLNLDSSNW 636
+ I+ + +A+ + H +VH ++ +N+LL G ++DF +A + + W
Sbjct: 114 HCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW 170
Query: 637 SKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
AGT G ++PE+ + D+++ GV+ ++ G P
Sbjct: 171 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 660 CDVYSFGVLALEVIKG 675
D++S GV+ E+IKG
Sbjct: 206 VDIWSVGVIMGEMIKG 221
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L S E T+ +K + + ++YLH+ I H+D+ +N
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATE---FLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 610 V-LLDLGY---EAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD + DF +A ++ + + + GT VAPE+ + + D++S
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 204 GVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L S E T+ L K + + ++YLH+ I H+D+ +N
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFL---KQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 610 V-LLDLGY---EAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD + DF +A ++ + + + GT VAPE+ + + D++S
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 204 GVITYILLSGASP 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L S E T+ L K + + ++YLH+ I H+D+ +N
Sbjct: 90 LILELVAGGELFDFLAEKESLTEEEATEFL---KQILNGVYYLHS---LQIAHFDLKPEN 143
Query: 610 V-LLDLGY---EAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD + DF +A ++ + + + GT VAPE+ + + D++S
Sbjct: 144 IMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 202
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 203 GVITYILLSGASP 215
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L S E T+ L K + + ++YLH+ I H+D+ +N
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFL---KQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 610 V-LLDLGY---EAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD + DF +A ++ + + + GT VAPE+ + + D++S
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 204 GVITYILLSGASP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L S E T+ L K + + ++YLH+ I H+D+ +N
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFL---KQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 610 V-LLDLGY---EAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD + DF +A ++ + + + GT VAPE+ + + D++S
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 204 GVITYILLSGASP 216
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
+AD + YL+ F VH D++++N ++ + + DF + + ++ +++ + G
Sbjct: 138 IADGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGL 192
Query: 644 ---GNVAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE T D++SFGV+ E+
Sbjct: 193 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 80/209 (38%), Gaps = 42/209 (20%)
Query: 502 DFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKF------------------------HSP 536
DF IG GG G V+ A+ G+ + +K+ ++
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNG 71
Query: 537 LPDNFCSHPRQS------------FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKG 584
D F P S FI E+ + G+L++ + K L L + +
Sbjct: 72 CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK-LDKVLALELFEQ 130
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHG 644
+ + Y+H+ +++ D+ N+ L + + DF + L D + GT
Sbjct: 131 ITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR-XRSKGTLR 186
Query: 645 NVAPELAYTMKVTEKCDVYSFGVLALEVI 673
++PE + ++ D+Y+ G++ E++
Sbjct: 187 YMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 48/107 (44%), Gaps = 15/107 (14%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
L++ +A+A+ +LH+ ++H D+ N+ + V DF + ++ D +
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 639 LA------------GTHGNVAPELAYTMKVTEKCDVYSFGVLALEVI 673
L GT ++PE + + K D++S G++ E++
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTE 658
+H D++++N+LL + DF +A+ + D K +APE + T
Sbjct: 166 IHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 225
Query: 659 KCDVYSFGVLALEV 672
+ DV+SFGVL E+
Sbjct: 226 QSDVWSFGVLLWEI 239
>pdb|2Z81|A Chain A, Crystal Structure Of The Tlr1-tlr2 Heterodimer Induced By
Binding Of A Tri-acylated Lipopeptide
pdb|2Z82|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%)
Query: 276 GESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLS 335
G + ++ LDLS N I L L + L ++++ SL +LE+LDLS
Sbjct: 23 GLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLS 82
Query: 336 ANHLSNFVLESLGSLVKLYYLNLSHN 361
NHLS+ G L L YLNL N
Sbjct: 83 DNHLSSLSSSWFGPLSSLKYLNLMGN 108
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
+AD + YL+ F VH D++++N ++ + + DF + + ++ +++ + G
Sbjct: 139 IADGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGL 193
Query: 644 ---GNVAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE T D++SFGV+ E+
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTE 658
+H D++++N+LL + DF +A+ + D K +APE + T
Sbjct: 207 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 266
Query: 659 KCDVYSFGVLALEV 672
+ DV+SFGVL E+
Sbjct: 267 QSDVWSFGVLLWEI 280
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTE 658
+H D++++N+LL + DF +A+ + D K +APE + T
Sbjct: 166 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 225
Query: 659 KCDVYSFGVLALEV 672
+ DV+SFGVL E+
Sbjct: 226 QSDVWSFGVLLWEI 239
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
++ E + G L L S E T+ L K + + ++YLH+ I H+D+ +N
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFL---KQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 610 V-LLDLGY---EAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSF 665
+ LLD + DF +A ++ + + + GT VAPE+ + + D++S
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203
Query: 666 GVLALEVIKGKHP 678
GV+ ++ G P
Sbjct: 204 GVITYILLSGASP 216
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTE 658
+H D++++N+LL + DF +A+ + D K +APE + T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 659 KCDVYSFGVLALEV 672
+ DV+SFGVL E+
Sbjct: 230 QSDVWSFGVLLWEI 243
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 60/141 (42%), Gaps = 16/141 (11%)
Query: 543 SHPRQSFIVYEYLESGSLDKIL-------NNDASAKELGWTQRLNVIKGVADALFYLHNN 595
S + + +V E + G L L N+ + + + +AD + YL+
Sbjct: 90 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK 149
Query: 596 CFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH----GNVAPELA 651
F VH D++++N ++ + + DF + + ++ ++ + G +APE
Sbjct: 150 KF---VHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRWMAPESL 204
Query: 652 YTMKVTEKCDVYSFGVLALEV 672
T D++SFGV+ E+
Sbjct: 205 KDGVFTTSSDMWSFGVVLWEI 225
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
F+V++ ++ G L L + E + +++ + + + LH IVH D+ +
Sbjct: 100 FLVFDLMKKGELFDYLTEKVTLSE---KETRKIMRALLEVICALHK---LNIVHRDLKPE 153
Query: 609 NVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMK------VTEKCDV 662
N+LLD ++DF + L+ + GT +APE+ ++ D+
Sbjct: 154 NILLDDDMNIKLTDFGFSCQLD-PGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 212
Query: 663 YSFGVLALEVIKGKHP 678
+S GV+ ++ G P
Sbjct: 213 WSTGVIMYTLLAGSPP 228
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 579 LNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638
V KG+ F C +H D++++N+LL + DF +A+ + D K
Sbjct: 205 FQVAKGME---FLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 257
Query: 639 LAGTH--GNVAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE + T + DV+SFGVL E+
Sbjct: 258 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 293
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTE 658
+H D++++N+LL + DF +A+ + D K +APE + T
Sbjct: 172 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 231
Query: 659 KCDVYSFGVLALEV 672
+ DV+SFGVL E+
Sbjct: 232 QSDVWSFGVLLWEI 245
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH- 643
+AD + YL+ F VH D++++N ++ + + DF + + ++ ++ + G
Sbjct: 136 IADGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGL 190
Query: 644 ---GNVAPELAYTMKVTEKCDVYSFGVLALEV 672
+APE T D++SFGV+ E+
Sbjct: 191 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTE 658
+H D++++N+LL + DF +A+ + D K +APE + T
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 220
Query: 659 KCDVYSFGVLALEV 672
+ DV+SFGVL E+
Sbjct: 221 QSDVWSFGVLLWEI 234
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTE 658
+H D++++N+LL + DF +A+ + D K +APE + T
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 274
Query: 659 KCDVYSFGVLALEV 672
+ DV+SFGVL E+
Sbjct: 275 QSDVWSFGVLLWEI 288
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTE 658
+H D++++N+LL + DF +A+ + D K +APE + T
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 220
Query: 659 KCDVYSFGVLALEV 672
+ DV+SFGVL E+
Sbjct: 221 QSDVWSFGVLLWEI 234
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 60/141 (42%), Gaps = 16/141 (11%)
Query: 543 SHPRQSFIVYEYLESGSLDKIL-------NNDASAKELGWTQRLNVIKGVADALFYLHNN 595
S + + +V E + G L L N+ + + + +AD + YL+
Sbjct: 90 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK 149
Query: 596 CFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH----GNVAPELA 651
F VH D++++N ++ + + DF + + ++ ++ + G +APE
Sbjct: 150 KF---VHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRWMAPESL 204
Query: 652 YTMKVTEKCDVYSFGVLALEV 672
T D++SFGV+ E+
Sbjct: 205 KDGVFTTSSDMWSFGVVLWEI 225
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 19/107 (17%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLL-----DLGYEAHVS---------DFRIAKF-- 628
+ AL +LH N + H D+ +N+L + Y H S R+A F
Sbjct: 132 LCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 188
Query: 629 LNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKG 675
D + + + T PE+ + + CDV+S G + E +G
Sbjct: 189 ATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 568 ASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNV-LLDLGY---EAHVSDF 623
A + L + +K + + ++YLH+ I H+D+ +N+ LLD + DF
Sbjct: 106 AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 624 RIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
+A ++ + + + GT VAPE+ + + D++S GV+ ++ G P
Sbjct: 163 GLAHKIDF-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTE 658
+H D++++N+LL + DF +A+ + D K +APE + T
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 281
Query: 659 KCDVYSFGVLALEV 672
+ DV+SFGVL E+
Sbjct: 282 QSDVWSFGVLLWEI 295
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH--GNVAPELAYTMKVTE 658
+H D++++N+LL + DF +A+ + D K +APE + T
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 272
Query: 659 KCDVYSFGVLALEV 672
+ DV+SFGVL E+
Sbjct: 273 QSDVWSFGVLLWEI 286
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 19/107 (17%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLL-----DLGYEAHVS---------DFRIAKF-- 628
+ AL +LH N + H D+ +N+L + Y H S R+A F
Sbjct: 164 LCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 220
Query: 629 LNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKG 675
D + + + T PE+ + + CDV+S G + E +G
Sbjct: 221 ATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 267
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 19/107 (17%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLL-----DLGYEAHVS---------DFRIAKF-- 628
+ AL +LH N + H D+ +N+L + Y H S R+A F
Sbjct: 141 LCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 197
Query: 629 LNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKG 675
D + + + T PE+ + + CDV+S G + E +G
Sbjct: 198 ATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAK--FLNLDSSNWSKLAGTHGNVAPELAYTMKVTE 658
+H D++++N+LL + DF +A+ + N D +APE + +
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYST 280
Query: 659 KCDVYSFGVLALEVI 673
K DV+S+GVL E+
Sbjct: 281 KSDVWSYGVLLWEIF 295
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 81/213 (38%), Gaps = 51/213 (23%)
Query: 506 KHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPDNFCSHPR------------------- 546
+ IGKG G V+ + GE AVK F S ++
Sbjct: 47 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 547 --------QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF- 597
Q ++V +Y E GSL LN E + + A L +LH
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHMEIVG 161
Query: 598 ----PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS------KLAGTHGNVA 647
P I H D+ SKN+L+ ++D +A + DS+ + GT +A
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMA 219
Query: 648 PEL---AYTMKVTE---KCDVYSFGVLALEVIK 674
PE+ + MK E + D+Y+ G++ E+ +
Sbjct: 220 PEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 252
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 19/152 (12%)
Query: 585 VADALFYLHN-NCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH 643
+ A+ YL + NC VH DI+ +N+L+ + DF ++++ ++ ++ K + T
Sbjct: 122 ICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRY--IEDEDYYKASVTR 175
Query: 644 ---GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDS 699
++PE + T DV+ F V E++ GK P
Sbjct: 176 LPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP----FFWLENKDVIGVLEKGD 231
Query: 700 RLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRP 731
RLP P L ++M C D +P RP
Sbjct: 232 RLPKPDL-CPPVLYTLMT---RCWDYDPSDRP 259
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 18/142 (12%)
Query: 543 SHPRQSFIVYEYLESGSLDKILN-------NDASAKELGWTQRLNVIKGVADALFYLHNN 595
S + + +V E + G L L N+ + + + +AD + YL+
Sbjct: 90 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK 149
Query: 596 CFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHG-----NVAPEL 650
F VH D++++N ++ + + DF + + + +++ + K G G +APE
Sbjct: 150 KF---VHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETAYYRK--GGKGLLPVRWMAPES 203
Query: 651 AYTMKVTEKCDVYSFGVLALEV 672
T D++SFGV+ E+
Sbjct: 204 LKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 19/152 (12%)
Query: 585 VADALFYLHN-NCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH 643
+ A+ YL + NC VH DI+ +N+L+ + DF ++++ ++ ++ K + T
Sbjct: 134 ICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRY--IEDEDYYKASVTR 187
Query: 644 ---GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDS 699
++PE + T DV+ F V E++ GK P
Sbjct: 188 LPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP----FFWLENKDVIGVLEKGD 243
Query: 700 RLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRP 731
RLP P L ++M C D +P RP
Sbjct: 244 RLPKPDL-CPPVLYTLMT---RCWDYDPSDRP 271
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 26/142 (18%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQRL--NVIKGVADALFYLHNNCFPPIVHWDIS 606
IV E L+ G L + + + +T+R + K + +A+ YLH+ I H D+
Sbjct: 135 LIVXECLDGGELFSRIQDRG---DQAFTEREASEIXKSIGEAIQYLHSIN---IAHRDVK 188
Query: 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN----------VAPELAYTMKV 656
+N+L + R L L ++K +H + VAPE+ K
Sbjct: 189 PENLLY--------TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKY 240
Query: 657 TEKCDVYSFGVLALEVIKGKHP 678
+ CD +S GV+ ++ G P
Sbjct: 241 DKSCDXWSLGVIXYILLCGYPP 262
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 19/152 (12%)
Query: 585 VADALFYLHN-NCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH 643
+ A+ YL + NC VH DI+ +N+L+ + DF ++++ ++ ++ K + T
Sbjct: 118 ICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRY--IEDEDYYKASVTR 171
Query: 644 ---GNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDXXXXXXXXXXXXXXXXXDS 699
++PE + T DV+ F V E++ GK P
Sbjct: 172 LPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP----FFWLENKDVIGVLEKGD 227
Query: 700 RLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRP 731
RLP P L ++M C D +P RP
Sbjct: 228 RLPKPDL-CPPVLYTLMT---RCWDYDPSDRP 255
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 81/213 (38%), Gaps = 51/213 (23%)
Query: 506 KHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPDNFCSHPR------------------- 546
+ IGKG G V+ + GE AVK F S ++
Sbjct: 34 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 547 --------QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF- 597
Q ++V +Y E GSL LN E + + A L +LH
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHMEIVG 148
Query: 598 ----PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS------KLAGTHGNVA 647
P I H D+ SKN+L+ ++D +A + DS+ + GT +A
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMA 206
Query: 648 PEL---AYTMKVTE---KCDVYSFGVLALEVIK 674
PE+ + MK E + D+Y+ G++ E+ +
Sbjct: 207 PEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 239
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 22/140 (15%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKG-------------VADALFYLHNNC 596
+++ Y G L + L + ++G T +K +A + YL ++
Sbjct: 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH- 164
Query: 597 FPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH----GNVAPELAY 652
+VH D++++NVL+ +SD + F + ++++ KL G +APE
Sbjct: 165 --HVVHKDLATRNVLVYDKLNVKISDLGL--FREVYAADYYKLLGNSLLPIRWMAPEAIM 220
Query: 653 TMKVTEKCDVYSFGVLALEV 672
K + D++S+GV+ EV
Sbjct: 221 YGKFSIDSDIWSYGVVLWEV 240
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 205 YTKSIDIWSVGCILAEMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 165 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 225 YTKSIDIWSVGCILAEMLSNR 245
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 205 YTKSIDIWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 81/213 (38%), Gaps = 51/213 (23%)
Query: 506 KHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPDNFCSHPR------------------- 546
+ IGKG G V+ + GE AVK F S ++
Sbjct: 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 547 --------QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF- 597
Q ++V +Y E GSL LN E + + A L +LH
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHMEIVG 122
Query: 598 ----PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS------KLAGTHGNVA 647
P I H D+ SKN+L+ ++D +A + DS+ + GT +A
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 648 PEL---AYTMKVTE---KCDVYSFGVLALEVIK 674
PE+ + MK E + D+Y+ G++ E+ +
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 213
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 205 YTKSIDIWSVGCILAEMLSNR 225
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 22/140 (15%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKG-------------VADALFYLHNNC 596
+++ Y G L + L + ++G T +K +A + YL ++
Sbjct: 89 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH- 147
Query: 597 FPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTH----GNVAPELAY 652
+VH D++++NVL+ +SD + F + ++++ KL G +APE
Sbjct: 148 --HVVHKDLATRNVLVYDKLNVKISDLGL--FREVYAADYYKLLGNSLLPIRWMAPEAIM 203
Query: 653 TMKVTEKCDVYSFGVLALEV 672
K + D++S+GV+ EV
Sbjct: 204 YGKFSIDSDIWSYGVVLWEV 223
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 81/213 (38%), Gaps = 51/213 (23%)
Query: 506 KHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPDNFCSHPR------------------- 546
+ IGKG G V+ + GE AVK F S ++
Sbjct: 14 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 547 --------QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF- 597
Q ++V +Y E GSL LN E + + A L +LH
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHMEIVG 128
Query: 598 ----PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS------KLAGTHGNVA 647
P I H D+ SKN+L+ ++D +A + DS+ + GT +A
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMA 186
Query: 648 PEL---AYTMKVTE---KCDVYSFGVLALEVIK 674
PE+ + MK E + D+Y+ G++ E+ +
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 219
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 81/213 (38%), Gaps = 51/213 (23%)
Query: 506 KHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPDNFCSHPR------------------- 546
+ IGKG G V+ + GE AVK F S ++
Sbjct: 9 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 547 --------QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF- 597
Q ++V +Y E GSL LN E + + A L +LH
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHMEIVG 123
Query: 598 ----PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS------KLAGTHGNVA 647
P I H D+ SKN+L+ ++D +A + DS+ + GT +A
Sbjct: 124 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMA 181
Query: 648 PEL---AYTMKVTE---KCDVYSFGVLALEVIK 674
PE+ + MK E + D+Y+ G++ E+ +
Sbjct: 182 PEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 214
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 81/213 (38%), Gaps = 51/213 (23%)
Query: 506 KHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPDNFCSHPR------------------- 546
+ IGKG G V+ + GE AVK F S ++
Sbjct: 11 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 547 --------QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF- 597
Q ++V +Y E GSL LN E + + A L +LH
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHMEIVG 125
Query: 598 ----PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWS------KLAGTHGNVA 647
P I H D+ SKN+L+ ++D +A + DS+ + GT +A
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMA 183
Query: 648 PEL---AYTMKVTE---KCDVYSFGVLALEVIK 674
PE+ + MK E + D+Y+ G++ E+ +
Sbjct: 184 PEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 216
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 13/135 (9%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQR--LNVIKGVADALFYLHNNCFPPIVHWDIS 606
I+ E +E G L + + +T+R +++ + A+ +LH++ I H D+
Sbjct: 102 LIIMECMEGGEL---FSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVK 155
Query: 607 SKNVLLDLGYEAHV---SDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVY 663
+N+L + V +DF AK + T VAPE+ K + CD++
Sbjct: 156 PENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMW 213
Query: 664 SFGVLALEVIKGKHP 678
S GV+ ++ G P
Sbjct: 214 SLGVIMYILLCGFPP 228
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 165 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 225 YTKSIDIWSVGCILAEMLSNR 245
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 209
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 210 YTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 151 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 210
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 211 YTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 142 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 201
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 202 YTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 203 YTKSIDIWSVGCILAEMLSNR 223
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 205 YTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 207 YTKSIDIWSVGCILAEMLSNR 227
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 660 CDVYSFGVLALEVIKG 675
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 203 YTKSIDIWSVGCILAEMLSNR 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 153 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 212
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 213 YTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 205 YTKSIDIWSVGCILAEMLSNR 225
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 207 YTKSIDIWSVGCILAEMLSNR 227
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 13/135 (9%)
Query: 549 FIVYEYLESGSLDKILNNDASAKELGWTQR--LNVIKGVADALFYLHNNCFPPIVHWDIS 606
I+ E +E G L + + +T+R +++ + A+ +LH++ I H D+
Sbjct: 83 LIIMECMEGGEL---FSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVK 136
Query: 607 SKNVLLDLGYEAHV---SDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVY 663
+N+L + V +DF AK + T VAPE+ K + CD++
Sbjct: 137 PENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMW 194
Query: 664 SFGVLALEVIKGKHP 678
S GV+ ++ G P
Sbjct: 195 SLGVIMYILLCGFPP 209
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + ++ T APE+ K
Sbjct: 147 VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 207 YTKSIDIWSVGCILAEMLSNR 227
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 660 CDVYSFGVLALEVIKG 675
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 206
Query: 660 CDVYSFGVLALEVIKG 675
D++S G + E+IKG
Sbjct: 207 VDIWSVGCIMGEMIKG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 660 CDVYSFGVLALEVIKG 675
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 660 CDVYSFGVLALEVIKG 675
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 660 CDVYSFGVLALEVIKG 675
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 660 CDVYSFGVLALEVIKG 675
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|1WWL|A Chain A, Crystal Structure Of Cd14
pdb|1WWL|B Chain B, Crystal Structure Of Cd14
Length = 312
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 375 IHLSELDLSHNFLGEKISSRICRMES-LEKLNLSYNNLSGLIPRCFEELHGLLHIDISYN 433
+ L LDLSHN L + + C S L LNLS+ L +P+ L +D+SYN
Sbjct: 228 VQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQ-VPKGLP--AKLSVLDLSYN 284
Query: 434 KLE 436
+L+
Sbjct: 285 RLD 287
>pdb|4ECO|A Chain A, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
pdb|4ECO|B Chain B, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
Length = 636
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 213 YNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIP 272
YNN + + + K L ++ NQL G +P +G +L+ L+++ N IT IP
Sbjct: 314 YNNLKTFPVETSLQKXKKLGXLECLYNQLEGKLPA---FGSEIKLASLNLAYNQIT-EIP 369
Query: 273 FEI-GESPQLQYLDLSSNYIVGEIPT--QLGNIIYLNRISLSGNKLSGRIPGE-LGSL-- 326
G + Q++ L + N + IP ++ + I S N++ G + G+ L
Sbjct: 370 ANFCGFTEQVENLSFAHNKL-KYIPNIFDAKSVSVXSAIDFSYNEI-GSVDGKNFDPLDP 427
Query: 327 -----INLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPI--------ELDN 373
IN+ ++LS N +S F E + L +NL N L+ +IP N
Sbjct: 428 TPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLXGNXLT-EIPKNSLKDENENFKN 486
Query: 374 LIHLSELDLSHNFLGEKISS--RICRMESLEKLNLSYNNLS 412
L+ +DL N L K+S R + L ++LSYN+ S
Sbjct: 487 TYLLTSIDLRFNKL-TKLSDDFRATTLPYLVGIDLSYNSFS 526
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPEVVTRYYRAPEVILGMGYKEN 205
Query: 660 CDVYSFGVLALEVIKG 675
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S T APE+ M E
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMVPFVVTRYYRAPEVILGMGYKEN 207
Query: 660 CDVYSFGVLALEVIKG 675
D++S G + E+IKG
Sbjct: 208 VDIWSVGCIMGEMIKG 223
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKL---AGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + L T APE+ K
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 208
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKL---AGTHGNVAPELAYTMK- 655
++H D+ N+LL+ + + DF +A+ + D + L T APE+ K
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 209
Query: 656 VTEKCDVYSFGVLALEVIKGK 676
T+ D++S G + E++ +
Sbjct: 210 YTKSIDIWSVGCILAEMLSNR 230
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 25/110 (22%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLL-----DLGY--------------EAHVSDFRI 625
+ A+ +LH+N + H D+ +N+L +L Y V DF
Sbjct: 146 LCQAVKFLHDN---KLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGS 202
Query: 626 AKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKG 675
A F D + S + T APE+ + ++ CDV+S G + E G
Sbjct: 203 ATF---DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 601 VHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNV---APELAYTMKVT 657
H D+ +N+L+ A++ DF IA ++L T G + APE T
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATT--DEKLTQLGNTVGTLYYXAPERFSESHAT 213
Query: 658 EKCDVYSFGVLALEVIKGKHP 678
+ D+Y+ + E + G P
Sbjct: 214 YRADIYALTCVLYECLTGSPP 234
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNW--SKLAGTHGNVAPELAYTMKVT 657
I+H D+ N+++ + DF +A+ S+N+ + T APE+ M
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAPEVILGMGYK 201
Query: 658 EKCDVYSFGVLALEVIKG 675
E D++S G + E++KG
Sbjct: 202 ENVDIWSVGCIMGELVKG 219
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 294 EIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKL 353
EIPT L I I L N + PG L +DLS N +S ++ L L
Sbjct: 25 EIPTNLPETI--TEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL 82
Query: 354 YYLNLSHNKLSQ 365
L L NK+++
Sbjct: 83 NSLVLYGNKITE 94
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 294 EIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKL 353
EIPT L I I L N + PG L +DLS N +S ++ L L
Sbjct: 25 EIPTNLPETI--TEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL 82
Query: 354 YYLNLSHNKLSQ 365
L L NK+++
Sbjct: 83 NSLVLYGNKITE 94
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN----WSKLAGTHG 644
L Y+H+ ++H D+ N+L++ E + DF +A+ L + ++ T
Sbjct: 172 LKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 645 NVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKH 677
APEL ++ + T+ D++S G + E++ +
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 588 ALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVA 647
L YLH + I+H D+ N+LLD ++DF +AK + + T A
Sbjct: 124 GLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRA 180
Query: 648 PELAYTMKVTE-KCDVYSFGVLALEVI 673
PEL + ++ D+++ G + E++
Sbjct: 181 PELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 21/142 (14%)
Query: 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609
IV+E L + D I N L +++ + ++ +LH+N + H D+ +N
Sbjct: 94 IVFELLGLSTYDFIKENGFLPFRLDHIRKMAY--QICKSVNFLHSN---KLTHTDLKPEN 148
Query: 610 VLL-----DLGYEAHVS---------DFRIAKF--LNLDSSNWSKLAGTHGNVAPELAYT 653
+L Y + D ++ F D + S L T APE+
Sbjct: 149 ILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILA 208
Query: 654 MKVTEKCDVYSFGVLALEVIKG 675
+ ++ CDV+S G + +E G
Sbjct: 209 LGWSQPCDVWSIGCILIEYYLG 230
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 30.8 bits (68), Expect = 3.1, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 34/76 (44%)
Query: 310 LSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPI 369
L N+++ PG L L LDL N L+ L +L L+L+ N+L
Sbjct: 37 LYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRG 96
Query: 370 ELDNLIHLSELDLSHN 385
DNL L+ + L +N
Sbjct: 97 AFDNLRSLTHIWLLNN 112
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 30.8 bits (68), Expect = 3.2, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 34/76 (44%)
Query: 310 LSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPI 369
L N+++ PG L L LDL N L+ L +L L+L+ N+L
Sbjct: 45 LYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRG 104
Query: 370 ELDNLIHLSELDLSHN 385
DNL L+ + L +N
Sbjct: 105 AFDNLKSLTHIWLLNN 120
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 589 LFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN----WSKLAGTHG 644
L Y+H+ ++H D+ N+L++ E + DF +A+ L + ++ T
Sbjct: 171 LKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 645 NVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKH 677
APEL ++ + T+ D++S G + E++ +
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 34/76 (44%)
Query: 310 LSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPI 369
L N+++ PG L L LDL N L+ L +L L+L+ N+L
Sbjct: 37 LYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRG 96
Query: 370 ELDNLIHLSELDLSHN 385
DNL L+ + L +N
Sbjct: 97 AFDNLKSLTHIWLLNN 112
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 119 VLEAVRHCHNXG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 173
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN C ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 124 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 178
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Query: 329 LEYLDLSAN-HLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFL 387
LE LDLS N L + + L +L+ L+L L + P L L L L N L
Sbjct: 82 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNAL 141
Query: 388 GEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPNSTTFRD 447
+ +L L L N +S + R F LH L + + N++ P++ FRD
Sbjct: 142 QALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHA--FRD 199
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 36/81 (44%)
Query: 281 LQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLS 340
L +L L N I + L+R+ L N+++ P L L L L AN+LS
Sbjct: 155 LTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 214
Query: 341 NFVLESLGSLVKLYYLNLSHN 361
E+L L L YL L+ N
Sbjct: 215 ALPTEALAPLRALQYLRLNDN 235
>pdb|1LTX|A Chain A, Structure Of Rab Escort Protein-1 In Complex With Rab
Geranylgeranyl Transferase And Isoprenoid
Length = 567
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 325 SLINLEYLDLSANHLSN---FVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELD 381
S++ +EY D+ HL++ VL L L+ + +L+LSHN+L + +P L L L L
Sbjct: 434 SVLKMEYADVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRL-RALPPALAALRCLEVLQ 492
Query: 382 LSHNFL 387
S N L
Sbjct: 493 ASDNAL 498
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN C ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 146 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 200
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 201 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 236
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN C ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 119 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 173
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|1DCE|A Chain A, Crystal Structure Of Rab Geranylgeranyltransferase From
Rat Brain
pdb|1DCE|C Chain C, Crystal Structure Of Rab Geranylgeranyltransferase From
Rat Brain
Length = 567
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 325 SLINLEYLDLSANHLSN---FVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELD 381
S++ +EY D+ HL++ VL L L+ + +L+LSHN+L + +P L L L L
Sbjct: 434 SVLKMEYADVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRL-RALPPALAALRCLEVLQ 492
Query: 382 LSHNFL 387
S N L
Sbjct: 493 ASDNAL 498
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Query: 329 LEYLDLSAN-HLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFL 387
LE LDLS N L + + L +L+ L+L L + P L L L L N L
Sbjct: 81 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNAL 140
Query: 388 GEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPNSTTFRD 447
+ +L L L N +S + R F LH L + + N++ P++ FRD
Sbjct: 141 QALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHA--FRD 198
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 36/81 (44%)
Query: 281 LQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLS 340
L +L L N I + L+R+ L N+++ P L L L L AN+LS
Sbjct: 154 LTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 213
Query: 341 NFVLESLGSLVKLYYLNLSHN 361
E+L L L YL L+ N
Sbjct: 214 ALPTEALAPLRALQYLRLNDN 234
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 140 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 198
Query: 660 CDVYSFGVLALEVIKGK 676
D++S G + E+++ K
Sbjct: 199 VDIWSVGCIMGEMVRHK 215
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN C ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 166 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 220
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 660 CDVYSFGVLALEVIKGK 676
D++S G + E+++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN C ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 166 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 220
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN C ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 119 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 173
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN C ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 152 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 206
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN C ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 152 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 206
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN C ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 151 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 205
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN C ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 123 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 177
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 158 VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 212
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 213 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN---WSKLAGTHGNVAPELAYTMK- 655
++H D+ N+L++ + + DF +A+ + + + ++ T APE+ K
Sbjct: 165 VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKG 224
Query: 656 VTEKCDVYSFGVLALEVIK------GKH 677
T+ D++S G + E++ GKH
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN C ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 123 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 177
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 660 CDVYSFGVLALEVIKGK 676
D++S G + E+++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN C ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 151 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 205
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN C ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 151 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 205
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 166 VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 220
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN C ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 152 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 206
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN C ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 152 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 206
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 171 VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 225
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 226 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 261
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN C ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 151 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 205
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN C ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 122 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 176
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 177 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 212
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN C ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 124 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 178
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 139 VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 193
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 660 CDVYSFGVLALEVIKGK 676
D++S G + E+++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 198
Query: 660 CDVYSFGVLALEVIKGK 676
D++S G + E+++ K
Sbjct: 199 VDIWSVGCIMGEMVRHK 215
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN C ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 124 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 178
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 199
Query: 660 CDVYSFGVLALEVIKGK 676
D++S G + E+++ K
Sbjct: 200 VDIWSVGCIMGEMVRHK 216
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 660 CDVYSFGVLALEVIKGK 676
D++S G + E+++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 138 VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 192
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 199
Query: 660 CDVYSFGVLALEVIKGK 676
D++S G + E+++ K
Sbjct: 200 VDIWSVGCIMGEMVRHK 216
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 138 VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 192
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 206
Query: 660 CDVYSFGVLALEVIKGK 676
D++S G + E+++ K
Sbjct: 207 VDIWSVGCIMGEMVRHK 223
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 139 VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 193
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 585 VADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSNWSKLAGTH 643
V +A+ + HN ++H DI +N+L+DL E + DF L + ++ GT
Sbjct: 139 VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 193
Query: 644 GNVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 678
PE + Y V+S G+L +++ G P
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 204
Query: 660 CDVYSFGVLALEVIKGK 676
D++S G + E+++ K
Sbjct: 205 VDIWSVGCIMGEMVRHK 221
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 660 CDVYSFGVLALEVIKGK 676
D++S G + E+++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 206
Query: 660 CDVYSFGVLALEVIKGK 676
D++S G + E+++ K
Sbjct: 207 VDIWSVGCIMGEMVRHK 223
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 243
Query: 660 CDVYSFGVLALEVIKGK 676
D++S G + E+++ K
Sbjct: 244 VDIWSVGCIMGEMVRHK 260
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 660 CDVYSFGVLALEVIKGK 676
D++S G + E+++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEK 659
I+H D+ N+++ + DF +A+ S + T APE+ M E
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKEN 243
Query: 660 CDVYSFGVLALEVIKGK 676
D++S G + E+++ K
Sbjct: 244 VDIWSVGCIMGEMVRHK 260
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 29.3 bits (64), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 580 NVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631
V++ + + L+Y+H N I+H D+ + NVL+ ++DF +A+ +L
Sbjct: 129 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSL 177
>pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And
Ispinesib
pdb|4AP0|B Chain B, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And
Ispinesib
pdb|4AP0|C Chain C, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And
Ispinesib
pdb|4AP0|D Chain D, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And
Ispinesib
Length = 370
Score = 29.3 bits (64), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 97 NGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNK 144
NGT EFS ++ L++YN ELFD++ P +L+ D NK
Sbjct: 152 NGT--EFSV----KVSLLEIYNEELFDLLNPSSDVSERLQMFDDPRNK 193
>pdb|4ARN|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|C Chain C, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|D Chain D, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARR|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
pdb|4ARR|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
Length = 279
Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 323 LGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIEL-DNLIHLSELD 381
L L L+ + L++ L + L +L L N +++P L D+L +L ++
Sbjct: 119 LDRLHGLKRFRFTTRRLTHIPANLLTDMRNLSHLELRAN--IEEMPSHLFDDLENLESIE 176
Query: 382 LSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIP 440
N L + +M L++LNL+ N L + F+ L L I + N + P
Sbjct: 177 FGSNKLRQMPRGIFGKMPKLKQLNLASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 235
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 16/135 (11%)
Query: 550 IVYEYLESGSL-DKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608
+V EY++ G L D+I++ + EL + +K + + + ++H I+H D+ +
Sbjct: 163 LVMEYVDGGELFDRIIDESYNLTEL---DTILFMKQICEGIRHMHQMY---ILHLDLKPE 216
Query: 609 NVLL--DLGYEAHVSDFRIAKFLNLDSSNWSKLA---GTHGNVAPELAYTMKVTEKCDVY 663
N+L + + DF +A+ KL GT +APE+ V+ D++
Sbjct: 217 NILCVNRDAKQIKIIDFGLARRYKPRE----KLKVNFGTPEFLAPEVVNYDFVSFPTDMW 272
Query: 664 SFGVLALEVIKGKHP 678
S GV+A ++ G P
Sbjct: 273 SVGVIAYMLLSGLSP 287
>pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex
With Mg-Adp.
pdb|1II6|B Chain B, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex
With Mg-Adp.
pdb|1YRS|A Chain A, Crystal Structure Of Ksp In Complex With Inhibitor 1
pdb|1YRS|B Chain B, Crystal Structure Of Ksp In Complex With Inhibitor 1
pdb|2FME|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 (ksp) In
Complex With Mg-adp And (r)-4-(3-hydroxyphenyl)-n,n,7,8-
Tetramethyl-3,4-dihydroisoquinoline-2(1h)-carboxamide
pdb|2FME|B Chain B, Crystal Structure Of The Mitotic Kinesin Eg5 (ksp) In
Complex With Mg-adp And (r)-4-(3-hydroxyphenyl)-n,n,7,8-
Tetramethyl-3,4-dihydroisoquinoline-2(1h)-carboxamide
pdb|2GM1|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex
With Mg-Adp And
N-(3-Aminopropyl)-N-((3-Benzyl-5-Chloro-4-
Oxo-3,4-Dihydropyrrolo[2,1-F][1,2,4]triazin-2-Yl)
(Cyclopropyl)methyl)-4-Methylbenzamide
pdb|2GM1|B Chain B, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex
With Mg-Adp And
N-(3-Aminopropyl)-N-((3-Benzyl-5-Chloro-4-
Oxo-3,4-Dihydropyrrolo[2,1-F][1,2,4]triazin-2-Yl)
(Cyclopropyl)methyl)-4-Methylbenzamide
pdb|2GM1|D Chain D, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex
With Mg-Adp And
N-(3-Aminopropyl)-N-((3-Benzyl-5-Chloro-4-
Oxo-3,4-Dihydropyrrolo[2,1-F][1,2,4]triazin-2-Yl)
(Cyclopropyl)methyl)-4-Methylbenzamide
pdb|2GM1|E Chain E, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex
With Mg-Adp And
N-(3-Aminopropyl)-N-((3-Benzyl-5-Chloro-4-
Oxo-3,4-Dihydropyrrolo[2,1-F][1,2,4]triazin-2-Yl)
(Cyclopropyl)methyl)-4-Methylbenzamide
pdb|2G1Q|A Chain A, Crystal Structure Of Ksp In Complex With Inhibitor 9h
pdb|2G1Q|B Chain B, Crystal Structure Of Ksp In Complex With Inhibitor 9h
pdb|2PG2|A Chain A, Crystal Structure Of Ksp In Complex With Adp And Thiophene
Containing Inhibitor 15
pdb|2PG2|B Chain B, Crystal Structure Of Ksp In Complex With Adp And Thiophene
Containing Inhibitor 15
pdb|2UYI|A Chain A, Crystal Structure Of Ksp In Complex With Adp And Thiophene
Containing Inhibitor 33
pdb|2UYI|B Chain B, Crystal Structure Of Ksp In Complex With Adp And Thiophene
Containing Inhibitor 33
pdb|2UYM|A Chain A, Crystal Structure Of Ksp In Complex With Adp And Thiophene
Containing Inhibitor 37
pdb|2UYM|B Chain B, Crystal Structure Of Ksp In Complex With Adp And Thiophene
Containing Inhibitor 37
pdb|3K5E|A Chain A, The Structure Of Human Kinesin-Like Motor Protein
Kif11KSPEG5 IN COMPLEX WITH ADP AND ENASTROL.
pdb|3K5E|B Chain B, The Structure Of Human Kinesin-Like Motor Protein
Kif11KSPEG5 IN COMPLEX WITH ADP AND ENASTROL.
pdb|3K3B|A Chain A, Co-crystal Structure Of The Human Kinesin Eg5 With A Novel
Tetrahydro- Beta-carboline
pdb|3K3B|B Chain B, Co-crystal Structure Of The Human Kinesin Eg5 With A Novel
Tetrahydro- Beta-carboline
pdb|3L9H|A Chain A, X-Ray Structure Of Mitotic Kinesin-5 (Ksp, Kif11, Eg5)in
Complex With The Hexahydro-2h-Pyrano[3,2-C]quinoline Emd
534085
pdb|3L9H|B Chain B, X-Ray Structure Of Mitotic Kinesin-5 (Ksp, Kif11, Eg5)in
Complex With The Hexahydro-2h-Pyrano[3,2-C]quinoline Emd
534085
pdb|2X7C|A Chain A, Crystal Structure Of Human Kinesin Eg5 In Complex With
(S)-Enastron
pdb|2X7C|B Chain B, Crystal Structure Of Human Kinesin Eg5 In Complex With
(S)-Enastron
pdb|2X7D|A Chain A, Crystal Structure Of Human Kinesin Eg5 In Complex With
(S)-Dimethylenastron
pdb|2X7D|B Chain B, Crystal Structure Of Human Kinesin Eg5 In Complex With
(S)-Dimethylenastron
pdb|2X7E|A Chain A, Crystal Structure Of Human Kinesin Eg5 In Complex With
(R)-Fluorastrol
pdb|2X7E|B Chain B, Crystal Structure Of Human Kinesin Eg5 In Complex With
(R)-Fluorastrol
pdb|2WOG|A Chain A, Intermediate And Final States Of Human Kinesin Eg5 In
Complex With S-Trityl-L-Cysteine
pdb|2WOG|B Chain B, Intermediate And Final States Of Human Kinesin Eg5 In
Complex With S-Trityl-L-Cysteine
pdb|2WOG|C Chain C, Intermediate And Final States Of Human Kinesin Eg5 In
Complex With S-Trityl-L-Cysteine
pdb|2X2R|A Chain A, Crystal Structure Of Human Kinesin Eg5 In Complex With
(R)-2-Amino-3-((4-
Chlorophenyl)diphenylmethylthio)propanoic Acid
pdb|2X2R|B Chain B, Crystal Structure Of Human Kinesin Eg5 In Complex With
(R)-2-Amino-3-((4-
Chlorophenyl)diphenylmethylthio)propanoic Acid
pdb|2X2R|C Chain C, Crystal Structure Of Human Kinesin Eg5 In Complex With
(R)-2-Amino-3-((4-
Chlorophenyl)diphenylmethylthio)propanoic Acid
pdb|2XAE|A Chain A, Crystal Structure Of Human Kinesin Eg5 In Complex With
(R)-2-Amino-3-((S)-2-Methyl-1,
1-Diphenylbutylthio)propanoic Acid
pdb|2XAE|B Chain B, Crystal Structure Of Human Kinesin Eg5 In Complex With
(R)-2-Amino-3-((S)-2-Methyl-1,
1-Diphenylbutylthio)propanoic Acid
pdb|2XAE|C Chain C, Crystal Structure Of Human Kinesin Eg5 In Complex With
(R)-2-Amino-3-((S)-2-Methyl-1,
1-Diphenylbutylthio)propanoic Acid
pdb|4A50|A Chain A, Crystal Structure Of Human Kinesin Eg5 In Complex With
2-amino-5-(3-methylphenyl)-5,5-diphenylpentanoic Acid
pdb|4A51|A Chain A, Crystal Structure Of Human Kinesin Eg5 In Complex With
1-(3-(((2-aminoethyl)thio)diphenylmethyl)phenyl)ethanone
Hydrochloride
pdb|4A51|B Chain B, Crystal Structure Of Human Kinesin Eg5 In Complex With
1-(3-(((2-aminoethyl)thio)diphenylmethyl)phenyl)ethanone
Hydrochloride
pdb|4A51|C Chain C, Crystal Structure Of Human Kinesin Eg5 In Complex With
1-(3-(((2-aminoethyl)thio)diphenylmethyl)phenyl)ethanone
Hydrochloride
pdb|4A51|D Chain D, Crystal Structure Of Human Kinesin Eg5 In Complex With
1-(3-(((2-aminoethyl)thio)diphenylmethyl)phenyl)ethanone
Hydrochloride
pdb|4A51|E Chain E, Crystal Structure Of Human Kinesin Eg5 In Complex With
1-(3-(((2-aminoethyl)thio)diphenylmethyl)phenyl)ethanone
Hydrochloride
pdb|4A51|F Chain F, Crystal Structure Of Human Kinesin Eg5 In Complex With
1-(3-(((2-aminoethyl)thio)diphenylmethyl)phenyl)ethanone
Hydrochloride
pdb|4A51|G Chain G, Crystal Structure Of Human Kinesin Eg5 In Complex With
1-(3-(((2-aminoethyl)thio)diphenylmethyl)phenyl)ethanone
Hydrochloride
pdb|4A5Y|A Chain A, Eg5-Inhibitor Complex
pdb|4A5Y|B Chain B, Eg5-Inhibitor Complex
pdb|4A5Y|C Chain C, Eg5-Inhibitor Complex
Length = 368
Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 97 NGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNK 144
NGT EFS ++ L++YN ELFD++ P +L+ D NK
Sbjct: 150 NGT--EFSV----KVSLLEIYNEELFDLLNPSSDVSERLQMFDDPRNK 191
>pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian
Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom
Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain
In The Ampppnp State.
pdb|4AQW|C Chain C, Model Of Human Kinesin-5 Motor Domain (1ii6, 3hqd) And
Mammalian Tubulin Heterodimer (1jff) Docked Into The
9.5- Angstrom Cryo-em Map Of Microtubule-bound Kinesin-5
Motor Domain In The Rigor State
Length = 373
Score = 29.3 bits (64), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 97 NGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNK 144
NGT EFS ++ L++YN ELFD++ P +L+ D NK
Sbjct: 150 NGT--EFSV----KVSLLEIYNEELFDLLNPSSDVSERLQMFDDPRNK 191
>pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With
Adp And Monastrol
pdb|1Q0B|B Chain B, Crystal Structure Of The Motor Protein Ksp In Complex With
Adp And Monastrol
pdb|2FKY|A Chain A, Crystal Structure Of Ksp In Complex With Inhibitor 13
pdb|2FKY|B Chain B, Crystal Structure Of Ksp In Complex With Inhibitor 13
pdb|2FL2|A Chain A, Crystal Structure Of Ksp In Complex With Inhibitor 19
pdb|2FL2|B Chain B, Crystal Structure Of Ksp In Complex With Inhibitor 19
pdb|2FL6|A Chain A, Crystal Structure Of Ksp In Complex With Inhibitor 6
pdb|2FL6|B Chain B, Crystal Structure Of Ksp In Complex With Inhibitor 6
pdb|2IEH|A Chain A, Crystal Structure Of Human Kinesin Eg5 In Complex With
(R)- Mon97, A New Monastrol-Based Inhibitor That Binds
As (R)- Enantiomer
pdb|2IEH|B Chain B, Crystal Structure Of Human Kinesin Eg5 In Complex With
(R)- Mon97, A New Monastrol-Based Inhibitor That Binds
As (R)- Enantiomer
pdb|2Q2Y|A Chain A, Crystal Structure Of Ksp In Complex With Inhibitor 1
pdb|2Q2Y|B Chain B, Crystal Structure Of Ksp In Complex With Inhibitor 1
pdb|2Q2Z|A Chain A, Crystal Structure Of Ksp In Complex With Inhibitor 22
pdb|2Q2Z|B Chain B, Crystal Structure Of Ksp In Complex With Inhibitor 22
pdb|3CJO|A Chain A, Crystal Structure Of Ksp In Complex With Inhibitor 30
pdb|3CJO|B Chain B, Crystal Structure Of Ksp In Complex With Inhibitor 30
Length = 367
Score = 29.3 bits (64), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 97 NGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNK 144
NGT EFS ++ L++YN ELFD++ P +L+ D NK
Sbjct: 149 NGT--EFSV----KVSLLEIYNEELFDLLNPSSDVSERLQMFDDPRNK 190
>pdb|4A28|A Chain A, Eg5-2
pdb|4A28|B Chain B, Eg5-2
Length = 368
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 97 NGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNK 144
NGT EFS ++ L++YN ELFD++ P +L+ D NK
Sbjct: 150 NGT--EFSV----KVSLLEIYNEELFDLLNPSSDVSERLQMFDDPRNK 191
>pdb|4A1Z|A Chain A, Eg5-1
pdb|4A1Z|B Chain B, Eg5-1
Length = 368
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 97 NGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNK 144
NGT EFS ++ L++YN ELFD++ P +L+ D NK
Sbjct: 150 NGT--EFSV----KVSLLEIYNEELFDLLNPSSDVSERLQMFDDPRNK 191
>pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And
Mg2+
pdb|3HQD|B Chain B, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And
Mg2+
pdb|3KEN|A Chain A, Human Eg5 In Complex With S-Trityl-L-Cysteine
Length = 369
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 97 NGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNK 144
NGT EFS ++ L++YN ELFD++ P +L+ D NK
Sbjct: 150 NGT--EFSV----KVSLLEIYNEELFDLLNPSSDVSERLQMFDDPRNK 191
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,135,696
Number of Sequences: 62578
Number of extensions: 862646
Number of successful extensions: 4018
Number of sequences better than 100.0: 961
Number of HSP's better than 100.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 696
Number of HSP's that attempted gapping in prelim test: 2237
Number of HSP's gapped (non-prelim): 1416
length of query: 752
length of database: 14,973,337
effective HSP length: 106
effective length of query: 646
effective length of database: 8,340,069
effective search space: 5387684574
effective search space used: 5387684574
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)