Query 041438
Match_columns 752
No_of_seqs 999 out of 5352
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 11:45:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041438.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041438hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.9E-58 6.6E-63 549.1 33.7 433 29-473 4-752 (768)
2 4eco_A Uncharacterized protein 100.0 6E-53 2E-57 490.8 27.1 409 35-461 28-602 (636)
3 4ecn_A Leucine-rich repeat pro 100.0 2.1E-51 7.1E-56 486.0 28.4 383 33-432 265-785 (876)
4 4fih_A Serine/threonine-protei 100.0 2.4E-48 8.3E-53 411.1 15.8 226 501-739 74-324 (346)
5 4b9d_A Serine/threonine-protei 100.0 9.5E-49 3.3E-53 414.8 11.0 228 500-739 23-277 (350)
6 4g3f_A NF-kappa-beta-inducing 100.0 7.5E-48 2.6E-52 406.1 15.9 233 499-743 56-314 (336)
7 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.7E-48 9.4E-53 404.5 9.5 224 500-738 31-284 (311)
8 4fie_A Serine/threonine-protei 100.0 3.5E-47 1.2E-51 412.0 16.8 226 501-739 151-401 (423)
9 3hyh_A Carbon catabolite-derep 100.0 2.6E-47 9E-52 391.8 15.0 223 500-739 12-263 (275)
10 3omv_A RAF proto-oncogene seri 100.0 7.7E-47 2.6E-51 394.7 18.4 234 500-746 35-301 (307)
11 4aoj_A High affinity nerve gro 100.0 5E-47 1.7E-51 401.7 17.0 237 501-749 41-323 (329)
12 3ubd_A Ribosomal protein S6 ki 100.0 1.3E-47 4.5E-52 399.5 12.4 224 501-739 24-282 (304)
13 4gt4_A Tyrosine-protein kinase 100.0 4.9E-47 1.7E-51 397.9 16.4 231 501-743 26-304 (308)
14 4asz_A BDNF/NT-3 growth factor 100.0 2.1E-47 7.1E-52 399.0 12.2 233 501-745 13-289 (299)
15 3vq2_A TLR4, TOLL-like recepto 100.0 6.3E-45 2.1E-49 422.5 28.3 376 84-462 32-561 (606)
16 3v47_A TOLL-like receptor 5B a 100.0 9.1E-45 3.1E-49 406.0 25.9 371 71-442 6-414 (455)
17 3fpq_A Serine/threonine-protei 100.0 1E-45 3.6E-50 383.3 16.4 222 503-739 28-283 (290)
18 3rgz_A Protein brassinosteroid 100.0 1.3E-45 4.5E-50 438.7 19.3 350 86-438 320-743 (768)
19 3hmm_A TGF-beta receptor type- 100.0 1.5E-45 5.1E-50 387.6 16.1 243 501-748 3-300 (303)
20 4ase_A Vascular endothelial gr 100.0 1.1E-45 3.7E-50 394.5 12.9 238 496-744 59-346 (353)
21 4g31_A Eukaryotic translation 100.0 5.5E-45 1.9E-49 381.4 14.2 227 500-739 4-280 (299)
22 1ogq_A PGIP-2, polygalacturona 100.0 4.4E-44 1.5E-48 379.6 20.8 292 33-362 2-302 (313)
23 3j0a_A TOLL-like receptor 5; m 100.0 2.6E-43 8.9E-48 423.3 28.5 383 73-461 14-562 (844)
24 3t6q_A CD180 antigen; protein- 100.0 9.9E-43 3.4E-47 404.0 32.1 356 84-441 33-443 (606)
25 3t6q_A CD180 antigen; protein- 100.0 1.9E-42 6.4E-47 401.7 29.8 294 165-461 262-562 (606)
26 1ziw_A TOLL-like receptor 3; i 100.0 5.9E-42 2E-46 402.9 30.2 143 320-462 473-625 (680)
27 2z81_A CD282 antigen, TOLL-lik 100.0 1.8E-42 6.2E-47 396.9 23.5 382 72-461 3-512 (549)
28 4eco_A Uncharacterized protein 100.0 2.4E-42 8.1E-47 401.6 23.9 344 84-437 206-601 (636)
29 4b99_A Mitogen-activated prote 100.0 5.4E-43 1.9E-47 380.2 17.2 233 500-739 53-345 (398)
30 3v47_A TOLL-like receptor 5B a 100.0 3E-42 1E-46 385.5 23.4 354 109-462 30-411 (455)
31 2z63_A TOLL-like receptor 4, v 100.0 4.6E-42 1.6E-46 395.3 25.6 376 84-462 28-534 (570)
32 4f9c_A Cell division cycle 7-r 100.0 5E-43 1.7E-47 376.5 16.1 178 494-680 14-248 (361)
33 1ziw_A TOLL-like receptor 3; i 100.0 2.1E-41 7.2E-46 398.3 30.4 352 84-436 25-467 (680)
34 3v5w_A G-protein coupled recep 100.0 3.1E-43 1.1E-47 397.6 13.3 226 500-739 188-450 (689)
35 3vq2_A TLR4, TOLL-like recepto 100.0 1.7E-41 5.7E-46 393.6 25.0 355 84-441 56-563 (606)
36 4g8a_A TOLL-like receptor 4; l 100.0 7.7E-41 2.6E-45 389.9 29.8 404 55-461 11-582 (635)
37 2z7x_B TOLL-like receptor 1, v 100.0 7.3E-41 2.5E-45 380.9 28.5 362 84-461 21-483 (520)
38 2id5_A Lingo-1, leucine rich r 100.0 7.1E-41 2.4E-45 376.7 26.7 305 109-439 32-336 (477)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8.5E-41 2.9E-45 383.9 26.1 342 109-461 52-512 (562)
40 3uto_A Twitchin; kinase, muscl 100.0 8.2E-42 2.8E-46 389.2 15.5 229 500-739 156-411 (573)
41 4ecn_A Leucine-rich repeat pro 100.0 1.5E-40 5.3E-45 393.2 24.9 346 84-440 448-844 (876)
42 2z7x_B TOLL-like receptor 1, v 100.0 2.9E-40 9.9E-45 376.0 25.4 356 72-440 30-485 (520)
43 2z63_A TOLL-like receptor 4, v 100.0 1.8E-40 6.2E-45 382.0 21.8 346 109-458 28-506 (570)
44 3oja_B Anopheles plasmodium-re 100.0 7.4E-40 2.5E-44 378.4 24.7 335 107-462 49-383 (597)
45 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.9E-39 6.6E-44 372.6 27.4 334 111-459 33-486 (562)
46 3o6n_A APL1; leucine-rich repe 100.0 1.2E-39 4.3E-44 356.8 23.5 335 107-462 43-377 (390)
47 3j0a_A TOLL-like receptor 5; m 100.0 4.5E-39 1.5E-43 386.4 29.1 305 107-413 22-376 (844)
48 3uim_A Brassinosteroid insensi 100.0 1.7E-39 5.7E-44 346.7 20.9 258 488-747 17-313 (326)
49 2z81_A CD282 antigen, TOLL-lik 100.0 2.9E-39 9.8E-44 370.3 23.0 347 84-441 50-515 (549)
50 3fxz_A Serine/threonine-protei 100.0 1.4E-39 4.8E-44 342.5 16.3 227 499-739 18-270 (297)
51 3p86_A Serine/threonine-protei 100.0 1.4E-39 4.9E-44 344.3 15.6 239 495-746 31-299 (309)
52 1o6l_A RAC-beta serine/threoni 100.0 1.9E-39 6.4E-44 347.0 15.5 225 500-739 4-261 (337)
53 3txo_A PKC-L, NPKC-ETA, protei 100.0 5.3E-40 1.8E-44 353.5 9.9 226 499-739 21-281 (353)
54 2c30_A Serine/threonine-protei 100.0 8.8E-39 3E-43 340.2 19.1 239 489-740 23-296 (321)
55 3fe3_A MAP/microtubule affinit 100.0 2.1E-39 7.3E-44 345.5 14.3 225 499-739 13-265 (328)
56 4dc2_A Protein kinase C IOTA t 100.0 3.8E-39 1.3E-43 351.0 16.5 225 499-733 50-307 (396)
57 2yab_A Death-associated protei 100.0 7.6E-39 2.6E-43 345.4 18.4 229 499-739 10-273 (361)
58 3zgw_A Maternal embryonic leuc 100.0 3.1E-39 1.1E-43 346.4 14.6 227 499-740 8-262 (347)
59 2id5_A Lingo-1, leucine rich r 100.0 6.3E-38 2.1E-42 352.7 25.4 315 118-461 20-335 (477)
60 3soa_A Calcium/calmodulin-depe 100.0 8.5E-39 2.9E-43 354.2 17.3 231 498-739 8-268 (444)
61 1o6v_A Internalin A; bacterial 100.0 1.5E-37 5.2E-42 348.4 27.6 321 85-437 69-389 (466)
62 2qkw_B Protein kinase; three-h 100.0 1.5E-38 5.2E-43 338.5 18.4 251 491-746 29-316 (321)
63 1tki_A Titin; serine kinase, m 100.0 5.5E-39 1.9E-43 341.6 14.1 230 500-740 4-259 (321)
64 1xjd_A Protein kinase C, theta 100.0 2E-39 7E-44 347.7 10.8 227 498-739 14-270 (345)
65 2i0e_A Protein kinase C-beta I 100.0 3.5E-39 1.2E-43 346.9 12.4 226 499-739 18-277 (353)
66 3q4u_A Activin receptor type-1 100.0 9.2E-39 3.1E-43 336.7 15.3 236 499-743 6-300 (301)
67 2r5t_A Serine/threonine-protei 100.0 9.9E-39 3.4E-43 345.9 15.9 227 500-741 37-292 (373)
68 3s95_A LIMK-1, LIM domain kina 100.0 2E-38 6.8E-43 335.9 17.6 234 500-744 9-281 (310)
69 2psq_A Fibroblast growth facto 100.0 3.2E-38 1.1E-42 342.6 18.9 233 500-744 80-363 (370)
70 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.2E-38 7.4E-43 328.1 16.5 237 499-748 6-267 (268)
71 2qr7_A Ribosomal protein S6 ki 100.0 6.9E-39 2.4E-43 343.6 13.2 234 499-740 20-279 (342)
72 3a8x_A Protein kinase C IOTA t 100.0 1.5E-38 5.2E-43 341.4 15.5 230 500-739 8-276 (345)
73 4euu_A Serine/threonine-protei 100.0 6.2E-38 2.1E-42 333.5 20.0 240 500-744 8-308 (319)
74 2y0a_A Death-associated protei 100.0 3.6E-38 1.2E-42 336.2 17.8 228 500-739 10-272 (326)
75 2bdw_A Hypothetical protein K1 100.0 2.3E-38 7.7E-43 342.5 16.2 229 499-739 27-285 (362)
76 2nru_A Interleukin-1 receptor- 100.0 2.5E-37 8.4E-42 326.9 23.8 249 489-745 13-306 (307)
77 3niz_A Rhodanese family protei 100.0 4.5E-38 1.5E-42 333.3 18.0 233 499-739 19-301 (311)
78 1o6v_A Internalin A; bacterial 100.0 6.2E-37 2.1E-41 343.4 28.1 344 84-460 46-389 (466)
79 3c0i_A Peripheral plasma membr 100.0 1.2E-38 4E-43 343.6 13.5 231 500-739 23-287 (351)
80 1fot_A TPK1 delta, CAMP-depend 100.0 2.6E-38 8.8E-43 335.6 14.8 222 500-739 5-259 (318)
81 1csn_A Casein kinase-1; phosph 100.0 4.1E-38 1.4E-42 331.3 15.9 237 500-744 9-282 (298)
82 4hcu_A Tyrosine-protein kinase 100.0 2.8E-38 9.7E-43 327.5 14.3 233 500-745 9-266 (269)
83 3kul_A Ephrin type-A receptor 100.0 5.1E-38 1.7E-42 335.0 16.3 235 500-748 48-316 (325)
84 4hgt_A Casein kinase I isoform 100.0 5.4E-38 1.9E-42 329.9 16.2 239 498-744 6-279 (296)
85 3v8s_A RHO-associated protein 100.0 4.7E-39 1.6E-43 352.2 8.1 234 493-740 61-331 (410)
86 4eqm_A Protein kinase; transfe 100.0 3.5E-38 1.2E-42 331.3 14.4 236 500-746 10-276 (294)
87 2izr_A Casein kinase I isoform 100.0 3.7E-38 1.3E-42 336.9 14.7 237 500-744 8-280 (330)
88 4fmz_A Internalin; leucine ric 100.0 6.6E-37 2.2E-41 329.6 24.5 307 105-436 40-346 (347)
89 1nxk_A MAP kinase-activated pr 100.0 4.3E-38 1.5E-42 344.9 15.4 235 500-740 60-323 (400)
90 3a62_A Ribosomal protein S6 ki 100.0 6.1E-38 2.1E-42 334.7 16.1 225 500-739 16-277 (327)
91 3kn6_A Ribosomal protein S6 ki 100.0 1.7E-38 5.9E-43 338.5 11.4 233 501-739 8-271 (325)
92 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.9E-38 1.3E-42 338.8 13.9 222 500-739 40-294 (350)
93 3p1a_A MYT1 kinase, membrane-a 100.0 7.8E-38 2.7E-42 331.4 15.7 222 500-739 56-305 (311)
94 4aw2_A Serine/threonine-protei 100.0 1E-38 3.5E-43 352.2 8.9 237 492-739 65-339 (437)
95 2w4o_A Calcium/calmodulin-depe 100.0 8.2E-38 2.8E-42 336.6 15.7 230 499-739 51-306 (349)
96 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.3E-38 7.9E-43 338.2 11.3 225 499-740 7-260 (336)
97 4ejn_A RAC-alpha serine/threon 100.0 3.3E-38 1.1E-42 351.5 12.7 225 500-739 147-405 (446)
98 3pfq_A PKC-B, PKC-beta, protei 100.0 5.8E-38 2E-42 365.2 15.4 226 499-739 339-598 (674)
99 3bz5_A Internalin-J, INLJ; leu 100.0 2.5E-36 8.4E-41 336.3 27.8 324 84-442 42-393 (457)
100 3uzp_A CKI-delta, CKID, casein 100.0 1.4E-37 4.8E-42 326.8 16.7 239 499-745 7-280 (296)
101 2zv2_A Calcium/calmodulin-depe 100.0 8.2E-38 2.8E-42 329.2 14.9 226 500-739 12-293 (298)
102 3mdy_A Bone morphogenetic prot 100.0 2.1E-37 7.2E-42 331.8 18.2 247 499-750 35-336 (337)
103 3soc_A Activin receptor type-2 100.0 6.1E-38 2.1E-42 334.0 13.9 242 499-745 22-318 (322)
104 3qd2_B Eukaryotic translation 100.0 2E-37 6.8E-42 331.1 17.9 228 499-739 4-326 (332)
105 1ob3_A PFPK5, cell division co 100.0 7.4E-38 2.5E-42 327.9 14.1 233 501-739 2-281 (288)
106 4g8a_A TOLL-like receptor 4; l 100.0 1E-36 3.5E-41 355.0 25.2 355 84-439 76-583 (635)
107 1kob_A Twitchin; kinase, intra 100.0 9.1E-38 3.1E-42 340.0 15.2 229 500-739 50-305 (387)
108 3gen_A Tyrosine-protein kinase 100.0 8.7E-38 3E-42 326.3 14.2 233 499-744 22-279 (283)
109 2vd5_A DMPK protein; serine/th 100.0 2.8E-38 9.4E-43 346.3 10.9 236 492-739 52-328 (412)
110 3tki_A Serine/threonine-protei 100.0 7.6E-38 2.6E-42 333.2 14.0 230 499-740 5-263 (323)
111 4fr4_A YANK1, serine/threonine 100.0 8.3E-38 2.8E-42 339.3 14.4 226 500-738 14-271 (384)
112 3lb7_A RAF proto-oncogene seri 100.0 3.3E-37 1.1E-41 325.9 18.5 236 499-747 34-302 (307)
113 3dtc_A Mitogen-activated prote 100.0 1.3E-37 4.5E-42 322.7 14.4 227 500-743 6-271 (271)
114 2a2a_A Death-associated protei 100.0 3.1E-37 1.1E-41 328.4 17.6 228 500-739 11-273 (321)
115 3vhe_A Vascular endothelial gr 100.0 5.2E-38 1.8E-42 339.8 11.5 240 494-744 15-354 (359)
116 3llt_A Serine/threonine kinase 100.0 9.1E-38 3.1E-42 338.1 13.2 235 492-739 26-356 (360)
117 3o0g_A Cell division protein k 100.0 1.7E-37 5.7E-42 325.8 14.7 229 501-739 2-283 (292)
118 3kk8_A Calcium/calmodulin depe 100.0 2.5E-37 8.5E-42 323.0 15.8 229 499-739 4-262 (284)
119 3cbl_A C-FES, proto-oncogene t 100.0 1.2E-37 4.1E-42 339.1 13.9 231 499-744 112-373 (377)
120 2pmi_A Negative RE, cyclin-dep 100.0 1.9E-37 6.7E-42 329.3 15.1 232 499-739 3-294 (317)
121 3tt0_A Basic fibroblast growth 100.0 3E-37 1E-41 336.7 16.8 234 499-744 67-351 (382)
122 2qol_A Ephrin receptor; recept 100.0 1.2E-37 4E-42 338.3 13.5 234 500-747 44-311 (373)
123 3g2f_A Bone morphogenetic prot 100.0 1.8E-37 6E-42 332.5 14.7 243 499-746 11-319 (336)
124 1luf_A Muscle-specific tyrosin 100.0 1.6E-37 5.5E-42 333.7 14.2 238 498-746 44-336 (343)
125 3l9p_A Anaplastic lymphoma kin 100.0 9.5E-38 3.3E-42 338.5 12.5 236 500-746 70-346 (367)
126 2y7j_A Phosphorylase B kinase 100.0 5.8E-37 2E-41 332.1 18.6 236 492-739 85-360 (365)
127 3lm5_A Serine/threonine-protei 100.0 1.1E-37 3.8E-42 332.8 12.6 235 495-739 22-288 (327)
128 3bz5_A Internalin-J, INLJ; leu 100.0 4.1E-36 1.4E-40 334.5 25.8 302 104-437 37-353 (457)
129 3f3z_A Calcium/calmodulin-depe 100.0 3.8E-37 1.3E-41 320.4 16.2 228 499-739 7-262 (277)
130 2ivs_A Proto-oncogene tyrosine 100.0 3.8E-37 1.3E-41 326.4 16.2 235 499-745 21-311 (314)
131 3op5_A Serine/threonine-protei 100.0 9.8E-38 3.4E-42 338.3 11.7 235 499-744 33-328 (364)
132 3cok_A Serine/threonine-protei 100.0 1.8E-37 6.2E-42 323.0 13.1 227 499-739 9-263 (278)
133 3kex_A Receptor tyrosine-prote 100.0 3.7E-37 1.3E-41 328.4 15.7 232 500-746 12-277 (325)
134 3g33_A Cell division protein k 100.0 3E-37 1E-41 326.5 14.8 230 499-739 7-297 (308)
135 2x4f_A Myosin light chain kina 100.0 2.6E-37 8.9E-42 335.5 14.7 224 505-739 93-343 (373)
136 3o6n_A APL1; leucine-rich repe 100.0 2.9E-36 9.8E-41 330.0 22.9 307 88-415 49-355 (390)
137 1rjb_A FL cytokine receptor; k 100.0 4.2E-37 1.5E-41 330.7 15.9 239 499-747 43-336 (344)
138 3ork_A Serine/threonine protei 100.0 1E-37 3.6E-42 330.5 11.0 234 500-744 11-280 (311)
139 3gxj_A TGF-beta receptor type- 100.0 8.2E-39 2.8E-43 337.3 2.4 241 500-748 2-300 (303)
140 2eue_A Carbon catabolite derep 100.0 2.3E-37 7.9E-42 321.7 13.3 223 500-739 12-263 (275)
141 2y94_A 5'-AMP-activated protei 100.0 2.7E-37 9.1E-42 344.4 14.4 224 500-739 15-267 (476)
142 3hko_A Calcium/calmodulin-depe 100.0 3.4E-37 1.2E-41 331.5 14.8 236 496-739 21-331 (345)
143 3uc3_A Serine/threonine-protei 100.0 3E-37 1E-41 333.7 14.2 232 499-740 18-276 (361)
144 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.9E-37 9.8E-42 348.0 14.2 233 499-739 183-449 (543)
145 3mtl_A Cell division protein k 100.0 3.2E-37 1.1E-41 328.7 13.8 228 501-739 2-282 (324)
146 3qup_A Tyrosine-protein kinase 100.0 4.7E-37 1.6E-41 327.3 15.0 238 498-747 20-300 (323)
147 4f0f_A Serine/threonine-protei 100.0 9.3E-37 3.2E-41 319.2 17.0 230 499-743 17-287 (287)
148 3oz6_A Mitogen-activated prote 100.0 2.8E-37 9.5E-42 337.8 13.4 228 499-739 7-329 (388)
149 3sv0_A Casein kinase I-like; t 100.0 5.8E-37 2E-41 342.3 16.2 237 500-744 6-277 (483)
150 1b6c_B TGF-B superfamily recep 100.0 7.3E-37 2.5E-41 328.4 15.9 242 499-748 40-339 (342)
151 2v62_A Serine/threonine-protei 100.0 1.5E-37 5.3E-42 334.2 10.4 236 500-745 36-328 (345)
152 3t9t_A Tyrosine-protein kinase 100.0 3.9E-37 1.3E-41 318.4 12.9 233 500-745 7-264 (267)
153 3fdn_A Serine/threonine-protei 100.0 3E-37 1E-41 321.6 12.2 225 499-740 7-259 (279)
154 2eva_A TAK1 kinase - TAB1 chim 100.0 9E-37 3.1E-41 322.7 16.0 235 500-744 7-262 (307)
155 3ugc_A Tyrosine-protein kinase 100.0 2.7E-37 9.2E-42 324.7 11.9 239 500-745 9-291 (295)
156 1t46_A HOMO sapiens V-KIT hard 100.0 5.6E-37 1.9E-41 325.0 14.4 239 499-747 21-309 (313)
157 1mp8_A Focal adhesion kinase 1 100.0 6.5E-37 2.2E-41 319.5 14.6 231 499-744 13-275 (281)
158 3oja_B Anopheles plasmodium-re 100.0 5.8E-36 2E-40 345.8 24.1 306 89-415 56-361 (597)
159 4eut_A Serine/threonine-protei 100.0 5.3E-37 1.8E-41 336.3 14.5 240 500-744 8-308 (396)
160 3ttj_A Mitogen-activated prote 100.0 1.8E-36 6.1E-41 338.1 18.8 230 500-739 61-356 (464)
161 3poz_A Epidermal growth factor 100.0 4.5E-37 1.5E-41 328.0 13.4 233 500-746 14-279 (327)
162 3e7e_A HBUB1, BUB1A, mitotic c 100.0 6.9E-37 2.4E-41 331.8 15.0 230 499-744 63-338 (365)
163 2ac3_A MAP kinase-interacting 100.0 7E-37 2.4E-41 324.8 14.7 234 500-739 11-296 (316)
164 2wqm_A Serine/threonine-protei 100.0 8E-37 2.8E-41 323.5 15.0 239 499-745 30-297 (310)
165 2pvf_A Fibroblast growth facto 100.0 1.2E-36 4.2E-41 325.7 16.5 233 500-744 34-317 (334)
166 3bhy_A Death-associated protei 100.0 1.3E-36 4.3E-41 317.5 16.0 228 500-739 4-266 (283)
167 3dls_A PAS domain-containing s 100.0 1.2E-36 4E-41 325.7 16.0 219 499-739 22-275 (335)
168 4agu_A Cyclin-dependent kinase 100.0 8E-37 2.7E-41 323.6 14.4 232 500-739 2-285 (311)
169 2acx_A G protein-coupled recep 100.0 2.1E-37 7.3E-42 349.7 10.6 231 499-739 182-445 (576)
170 1ogq_A PGIP-2, polygalacturona 100.0 1.6E-36 5.3E-41 321.5 16.6 272 73-386 25-302 (313)
171 2rku_A Serine/threonine-protei 100.0 9.9E-37 3.4E-41 320.2 14.9 227 499-740 13-267 (294)
172 3i6u_A CDS1, serine/threonine- 100.0 1.7E-36 5.7E-41 334.6 17.4 229 499-739 133-400 (419)
173 3gni_B Strad alpha; kinase fol 100.0 1.4E-36 4.8E-41 332.4 16.5 232 499-739 23-334 (389)
174 3kmu_A ILK, integrin-linked ki 100.0 1.8E-36 6.1E-41 313.9 16.3 228 500-744 9-269 (271)
175 3dbq_A Dual specificity protei 100.0 6.5E-37 2.2E-41 329.0 13.4 227 500-740 8-275 (343)
176 4fcg_A Uncharacterized protein 100.0 4.6E-37 1.6E-41 327.6 11.9 282 33-363 23-313 (328)
177 2h34_A Serine/threonine-protei 100.0 1.2E-36 4.1E-41 322.0 15.0 238 499-748 32-299 (309)
178 4e5w_A Tyrosine-protein kinase 100.0 8.7E-37 3E-41 321.8 13.8 238 500-744 20-301 (302)
179 1p4o_A Insulin-like growth fac 100.0 3.4E-37 1.1E-41 328.2 10.6 237 497-744 21-298 (322)
180 1k9a_A Carboxyl-terminal SRC k 100.0 2.9E-36 9.9E-41 335.8 18.6 231 499-746 191-446 (450)
181 3og7_A AKAP9-BRAF fusion prote 100.0 8.4E-37 2.9E-41 320.0 13.4 235 499-744 22-287 (289)
182 2a19_B Interferon-induced, dou 100.0 1.2E-36 4.1E-41 317.6 14.4 234 499-750 9-279 (284)
183 3gbz_A Kinase, CMGC CDK; ssgci 100.0 5.9E-37 2E-41 327.4 12.2 230 498-739 31-319 (329)
184 3lij_A Calcium/calmodulin depe 100.0 1.8E-36 6.2E-41 341.9 16.7 227 500-739 36-292 (494)
185 1vzo_A Ribosomal protein S6 ki 100.0 7.9E-37 2.7E-41 329.8 13.2 230 500-740 53-323 (355)
186 3q60_A ROP5B; pseudokinase, tr 100.0 4.6E-37 1.6E-41 334.0 11.3 229 500-739 61-353 (371)
187 2owb_A Serine/threonine-protei 100.0 1E-36 3.5E-41 326.4 13.7 226 499-739 39-292 (335)
188 1qcf_A Haematopoetic cell kina 100.0 6.8E-37 2.3E-41 341.4 12.8 233 499-745 186-444 (454)
189 2zmd_A Dual specificity protei 100.0 1.5E-36 5E-41 331.8 15.2 227 500-740 55-322 (390)
190 3mwu_A Calmodulin-domain prote 100.0 1.2E-36 4E-41 342.8 14.6 227 500-739 21-277 (486)
191 3kfa_A Tyrosine-protein kinase 100.0 4.4E-37 1.5E-41 321.8 10.4 235 498-744 10-270 (288)
192 2jam_A Calcium/calmodulin-depe 100.0 1.4E-36 4.8E-41 320.7 14.2 229 499-740 7-263 (304)
193 3a7i_A MST3 kinase, serine/thr 100.0 2.1E-36 7.3E-41 319.1 15.6 227 500-741 21-273 (303)
194 3nyv_A Calmodulin-domain prote 100.0 9.1E-37 3.1E-41 343.7 13.5 228 500-740 25-283 (484)
195 2xir_A Vascular endothelial gr 100.0 1.2E-36 4.1E-41 322.9 13.6 239 495-744 21-309 (316)
196 1u59_A Tyrosine-protein kinase 100.0 1.6E-36 5.4E-41 317.5 14.2 232 500-746 8-273 (287)
197 3c1x_A Hepatocyte growth facto 100.0 3.4E-36 1.1E-40 326.6 17.2 232 501-745 89-355 (373)
198 1ua2_A CAK, cell division prot 100.0 1.4E-36 4.9E-41 326.8 14.1 232 498-740 7-293 (346)
199 2w5a_A Serine/threonine-protei 100.0 3.9E-37 1.3E-41 320.6 9.3 237 499-746 4-275 (279)
200 1qpc_A LCK kinase; alpha beta 100.0 2.5E-36 8.5E-41 314.6 15.3 233 499-745 11-269 (279)
201 3is5_A Calcium-dependent prote 100.0 1.3E-36 4.3E-41 318.0 12.8 229 500-739 21-279 (285)
202 1opk_A P150, C-ABL, proto-onco 100.0 2.2E-36 7.6E-41 340.6 15.7 235 499-745 218-478 (495)
203 2jii_A Serine/threonine-protei 100.0 1.2E-36 4E-41 328.3 12.9 240 500-744 41-335 (352)
204 4fmz_A Internalin; leucine ric 100.0 5.5E-35 1.9E-39 314.5 25.9 303 84-412 44-346 (347)
205 3kvw_A DYRK2, dual specificity 100.0 1.4E-36 4.9E-41 336.0 13.7 173 500-680 96-300 (429)
206 3lxl_A Tyrosine-protein kinase 100.0 1.4E-36 4.8E-41 324.2 13.1 239 500-745 22-303 (327)
207 1x8b_A WEE1HU, WEE1-like prote 100.0 2E-36 6.7E-41 316.5 13.8 223 499-739 9-280 (289)
208 3lzb_A Epidermal growth factor 100.0 2.2E-36 7.5E-41 322.6 14.4 234 500-747 14-280 (327)
209 3mi9_A Cell division protein k 100.0 3E-36 1E-40 325.0 15.5 232 500-739 16-312 (351)
210 4fvq_A Tyrosine-protein kinase 100.0 8.5E-37 2.9E-41 319.8 10.8 227 500-745 7-275 (289)
211 3q5i_A Protein kinase; CDPK, m 100.0 4.3E-36 1.5E-40 339.6 17.2 228 499-739 34-302 (504)
212 3com_A Serine/threonine-protei 100.0 4.3E-36 1.5E-40 318.4 16.1 230 499-739 27-279 (314)
213 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.7E-36 9.1E-41 336.3 15.2 233 499-745 182-440 (452)
214 1cm8_A Phosphorylated MAP kina 100.0 5.5E-36 1.9E-40 324.6 17.2 229 500-739 24-308 (367)
215 2yex_A Serine/threonine-protei 100.0 5E-36 1.7E-40 311.6 16.2 229 499-739 5-262 (276)
216 2vgo_A Serine/threonine-protei 100.0 1.7E-36 5.8E-41 316.7 12.7 223 500-739 13-263 (284)
217 4aaa_A Cyclin-dependent kinase 100.0 1.2E-36 4.3E-41 325.2 11.6 235 499-739 23-307 (331)
218 1phk_A Phosphorylase kinase; g 100.0 6.1E-36 2.1E-40 314.7 16.4 229 499-739 15-284 (298)
219 1mqb_A Ephrin type-A receptor 100.0 4.4E-36 1.5E-40 321.2 15.4 233 500-746 43-310 (333)
220 3lxp_A Non-receptor tyrosine-p 100.0 3E-36 1E-40 320.4 13.9 233 503-744 33-309 (318)
221 3cc6_A Protein tyrosine kinase 100.0 4.8E-36 1.6E-40 312.8 15.2 231 499-744 10-272 (281)
222 3f66_A Hepatocyte growth facto 100.0 7.7E-36 2.6E-40 314.0 16.8 234 499-745 23-291 (298)
223 2vx3_A Dual specificity tyrosi 100.0 2.9E-36 9.8E-41 329.0 13.9 176 499-680 52-259 (382)
224 3brb_A Proto-oncogene tyrosine 100.0 6E-36 2.1E-40 317.2 16.0 236 498-744 31-307 (313)
225 1byg_A CSK, protein (C-termina 100.0 3.7E-36 1.3E-40 313.2 14.0 230 499-745 19-273 (278)
226 3byv_A Rhoptry kinase; malaria 100.0 1.9E-36 6.4E-41 329.8 12.3 220 499-739 71-360 (377)
227 1z57_A Dual specificity protei 100.0 8.5E-36 2.9E-40 319.3 17.0 230 500-739 13-329 (339)
228 2ft3_A Biglycan; proteoglycan, 100.0 1.2E-34 3.9E-39 310.1 25.7 270 109-434 54-331 (332)
229 2ft3_A Biglycan; proteoglycan, 100.0 1.3E-34 4.5E-39 309.6 26.0 280 72-386 32-331 (332)
230 3fhr_A MAP kinase-activated pr 100.0 1.3E-36 4.6E-41 325.5 10.5 235 499-740 26-289 (336)
231 1xku_A Decorin; proteoglycan, 100.0 1.7E-34 5.7E-39 308.6 26.7 271 109-434 52-330 (330)
232 1fvr_A Tyrosine-protein kinase 100.0 4.2E-36 1.4E-40 320.5 14.2 234 500-746 24-301 (327)
233 2ycf_A Serine/threonine-protei 100.0 5.7E-36 2E-40 318.8 15.1 228 500-739 9-275 (322)
234 2i1m_A Macrophage colony-stimu 100.0 2.2E-36 7.5E-41 323.5 11.7 236 499-744 44-325 (333)
235 2x7f_A TRAF2 and NCK-interacti 100.0 1.2E-36 4.2E-41 324.5 9.7 237 492-739 15-287 (326)
236 1u5q_A Serine/threonine protei 100.0 4.4E-36 1.5E-40 322.7 14.0 226 500-742 53-309 (348)
237 1xbb_A Tyrosine-protein kinase 100.0 3.1E-36 1.1E-40 316.0 12.4 231 498-744 13-278 (291)
238 2buj_A Serine/threonine-protei 100.0 4.2E-36 1.4E-40 319.0 13.4 240 499-747 27-308 (317)
239 2h6d_A 5'-AMP-activated protei 100.0 3.6E-36 1.2E-40 312.8 12.5 224 500-739 10-262 (276)
240 2yfx_A Tyrosine-protein kinase 100.0 4.2E-36 1.4E-40 320.5 13.0 236 500-746 29-305 (327)
241 4e7w_A Glycogen synthase kinas 100.0 4.6E-36 1.6E-40 328.4 13.3 236 500-739 39-322 (394)
242 2xrw_A Mitogen-activated prote 100.0 1.7E-35 5.9E-40 321.4 17.7 231 500-740 24-320 (371)
243 3rp9_A Mitogen-activated prote 100.0 6.5E-36 2.2E-40 334.3 14.7 233 500-739 52-397 (458)
244 3n9x_A Phosphotransferase; mal 100.0 1.7E-35 5.9E-40 327.9 18.0 173 500-679 25-252 (432)
245 3fme_A Dual specificity mitoge 100.0 1.9E-36 6.4E-41 317.3 9.7 231 499-739 5-267 (290)
246 3eb0_A Putative uncharacterize 100.0 6E-36 2E-40 326.6 13.9 232 498-739 4-322 (383)
247 2clq_A Mitogen-activated prote 100.0 8.4E-36 2.9E-40 313.1 14.4 229 501-739 22-279 (295)
248 2r3i_A Cell division protein k 100.0 7.4E-36 2.5E-40 314.2 13.9 230 500-739 2-284 (299)
249 3pls_A Macrophage-stimulating 100.0 2.3E-35 7.8E-40 310.3 17.4 231 501-744 21-286 (298)
250 3ll6_A Cyclin G-associated kin 100.0 4.2E-36 1.4E-40 321.5 11.6 232 499-745 26-308 (337)
251 1xku_A Decorin; proteoglycan, 100.0 2.8E-34 9.6E-39 306.8 25.6 281 71-385 29-329 (330)
252 1t4h_A Serine/threonine-protei 100.0 2.5E-35 8.4E-40 308.9 17.0 224 501-739 26-283 (290)
253 3e3p_A Protein kinase, putativ 100.0 9.1E-36 3.1E-40 322.3 14.0 236 494-739 16-315 (360)
254 3nsz_A CK II alpha, casein kin 100.0 3.1E-35 1.1E-39 314.1 17.7 230 500-739 35-320 (330)
255 2j7t_A Serine/threonine-protei 100.0 4.6E-36 1.6E-40 316.3 10.8 230 499-739 17-276 (302)
256 3an0_A Dual specificity mitoge 100.0 5.2E-36 1.8E-40 321.6 11.2 231 499-739 49-311 (340)
257 1wak_A Serine/threonine-protei 100.0 1.1E-35 3.7E-40 326.1 13.5 229 500-739 36-392 (397)
258 1jl5_A Outer protein YOPM; leu 100.0 8.9E-34 3E-38 315.4 28.8 307 86-437 73-410 (454)
259 1u46_A ACK-1, activated CDC42 100.0 1.2E-35 4E-40 311.3 12.9 234 500-746 17-285 (291)
260 2eu9_A Dual specificity protei 100.0 2.3E-35 7.9E-40 318.2 15.4 230 500-739 18-334 (355)
261 1j1b_A Glycogen synthase kinas 100.0 1.7E-35 5.7E-40 326.6 14.2 234 500-739 53-337 (420)
262 2vwi_A Serine/threonine-protei 100.0 1.7E-35 5.9E-40 311.9 13.6 233 499-739 13-288 (303)
263 3pg1_A Mitogen-activated prote 100.0 2.2E-35 7.4E-40 319.7 14.5 242 491-739 12-317 (362)
264 2ozo_A Tyrosine-protein kinase 100.0 3.1E-35 1.1E-39 339.1 16.7 229 501-744 335-597 (613)
265 3qyz_A Mitogen-activated prote 100.0 3.1E-35 1.1E-39 318.6 15.8 228 499-739 25-314 (364)
266 3eqc_A Dual specificity mitoge 100.0 8.9E-36 3E-40 322.5 11.4 232 500-740 32-326 (360)
267 2fst_X Mitogen-activated prote 100.0 3E-35 1E-39 318.5 15.4 229 500-739 28-312 (367)
268 2wei_A Calmodulin-domain prote 100.0 1.9E-35 6.4E-40 309.4 13.1 228 499-739 20-277 (287)
269 2h8h_A Proto-oncogene tyrosine 100.0 1E-35 3.5E-40 338.2 12.0 233 499-745 265-523 (535)
270 1blx_A Cyclin-dependent kinase 100.0 2.2E-35 7.4E-40 314.7 13.5 231 498-739 8-297 (326)
271 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.5E-35 1.2E-39 312.1 15.0 233 499-746 31-303 (319)
272 2w1i_A JAK2; chromosomal rearr 100.0 2.2E-35 7.6E-40 314.8 13.1 238 500-744 40-321 (326)
273 3a99_A Proto-oncogene serine/t 100.0 1.9E-35 6.6E-40 314.3 12.5 220 497-739 39-294 (320)
274 2wtk_C Serine/threonine-protei 100.0 3.6E-35 1.2E-39 309.9 14.4 228 499-740 3-265 (305)
275 3rgf_A Cyclin-dependent kinase 100.0 1.7E-35 5.9E-40 325.4 12.0 238 499-740 18-335 (405)
276 2pml_X PFPK7, Ser/Thr protein 100.0 2.5E-35 8.4E-40 317.4 11.8 229 500-739 30-323 (348)
277 1jl5_A Outer protein YOPM; leu 100.0 7.7E-34 2.6E-38 316.0 23.9 330 84-458 11-369 (454)
278 4exu_A Mitogen-activated prote 100.0 8E-35 2.7E-39 316.2 15.3 228 500-739 41-324 (371)
279 1zy4_A Serine/threonine-protei 100.0 3.7E-35 1.3E-39 309.1 12.2 229 499-739 4-284 (303)
280 3cek_A Dual specificity protei 100.0 6.1E-35 2.1E-39 309.5 13.8 228 499-740 26-294 (313)
281 1q8y_A SR protein kinase; tran 100.0 8.3E-35 2.8E-39 316.3 14.9 229 500-739 18-334 (373)
282 4fl3_A Tyrosine-protein kinase 100.0 5.5E-35 1.9E-39 337.9 13.7 223 507-745 375-631 (635)
283 3p23_A Serine/threonine-protei 100.0 1.8E-34 6E-39 319.0 15.9 229 499-739 22-284 (432)
284 2iwi_A Serine/threonine-protei 100.0 1.5E-34 5.1E-39 306.3 14.6 219 498-739 28-284 (312)
285 2i6l_A Mitogen-activated prote 100.0 8.6E-35 2.9E-39 309.0 12.6 227 500-739 10-306 (320)
286 2b9h_A MAP kinase FUS3, mitoge 100.0 1.9E-34 6.7E-39 311.0 15.3 233 499-739 9-306 (353)
287 3aln_A Dual specificity mitoge 100.0 4.3E-35 1.5E-39 312.7 10.0 232 500-739 21-286 (327)
288 2dyl_A Dual specificity mitoge 100.0 7.9E-35 2.7E-39 309.1 11.0 229 499-739 23-284 (318)
289 2rio_A Serine/threonine-protei 100.0 1.2E-34 4.1E-39 321.3 12.4 228 501-739 15-296 (434)
290 2j0j_A Focal adhesion kinase 1 100.0 2.5E-34 8.6E-39 333.6 14.8 231 499-744 388-650 (656)
291 3dzo_A Rhoptry kinase domain; 100.0 2.8E-34 9.4E-39 316.2 14.2 220 499-739 76-364 (413)
292 3coi_A Mitogen-activated prote 100.0 4.7E-34 1.6E-38 308.1 15.4 227 500-739 23-306 (353)
293 3qa8_A MGC80376 protein; kinas 100.0 2.3E-34 7.7E-39 328.1 11.8 233 500-736 13-295 (676)
294 1z7x_W Ribonuclease inhibitor; 100.0 3E-36 1E-40 337.4 -9.1 354 85-438 4-413 (461)
295 3m2w_A MAP kinase-activated pr 100.0 2.3E-33 7.9E-38 295.3 12.5 213 500-739 16-257 (299)
296 2z66_A Variable lymphocyte rec 100.0 1.7E-32 5.9E-37 289.6 17.3 252 71-364 5-261 (306)
297 3uqc_A Probable conserved tran 100.0 8.8E-33 3E-37 288.6 13.9 209 500-746 30-266 (286)
298 2z80_A TOLL-like receptor 2, v 100.0 2.2E-32 7.6E-37 294.9 17.3 286 71-416 28-318 (353)
299 2z80_A TOLL-like receptor 2, v 100.0 4.5E-32 1.5E-36 292.6 16.4 280 109-441 31-319 (353)
300 2vuw_A Serine/threonine-protei 100.0 1.9E-32 6.5E-37 293.4 10.9 217 500-739 19-332 (336)
301 2pzi_A Probable serine/threoni 100.0 4.7E-32 1.6E-36 317.4 15.2 215 500-743 79-326 (681)
302 2z66_A Variable lymphocyte rec 100.0 1.2E-31 4.2E-36 283.1 15.6 248 113-389 11-262 (306)
303 1wwl_A Monocyte differentiatio 100.0 1.6E-32 5.5E-37 290.6 5.7 250 105-364 39-309 (312)
304 1z7x_W Ribonuclease inhibitor; 100.0 2.4E-34 8.2E-39 322.0 -11.2 351 108-458 2-410 (461)
305 3zyi_A Leucine-rich repeat-con 100.0 4.1E-30 1.4E-34 286.8 23.1 228 109-364 75-303 (452)
306 1ozn_A Reticulon 4 receptor; N 100.0 1.9E-30 6.5E-35 271.0 18.9 206 109-364 32-238 (285)
307 3zyi_A Leucine-rich repeat-con 100.0 4.7E-30 1.6E-34 286.3 23.1 235 125-389 69-304 (452)
308 4fcg_A Uncharacterized protein 100.0 2.5E-30 8.7E-35 275.4 19.9 236 131-388 79-314 (328)
309 3g06_A SSPH2 (leucine-rich rep 100.0 2E-30 6.7E-35 297.3 19.1 267 111-423 42-308 (622)
310 1ozn_A Reticulon 4 receptor; N 100.0 2.2E-30 7.4E-35 270.6 17.4 165 255-420 105-269 (285)
311 3zyj_A Leucine-rich repeat-con 100.0 8.3E-30 2.9E-34 283.2 22.9 227 109-363 64-291 (440)
312 3zyj_A Leucine-rich repeat-con 100.0 1.3E-29 4.4E-34 281.8 22.8 247 135-412 45-292 (440)
313 1wwl_A Monocyte differentiatio 100.0 2.5E-31 8.6E-36 281.5 7.1 253 151-437 37-310 (312)
314 3o53_A Protein LRIM1, AGAP0063 100.0 1.7E-31 5.7E-36 283.5 4.6 264 138-441 15-281 (317)
315 3o53_A Protein LRIM1, AGAP0063 100.0 2.6E-31 8.8E-36 282.0 4.2 243 158-440 11-255 (317)
316 3g06_A SSPH2 (leucine-rich rep 100.0 6E-28 2E-32 276.7 26.6 263 133-441 40-302 (622)
317 3oja_A Leucine-rich immune mol 100.0 1.7E-29 5.8E-34 283.7 10.3 234 158-431 35-270 (487)
318 2o6q_A Variable lymphocyte rec 100.0 8E-28 2.7E-32 249.0 20.9 216 71-340 3-218 (270)
319 3oja_A Leucine-rich immune mol 100.0 1.8E-29 6.3E-34 283.4 8.4 223 178-440 31-255 (487)
320 2z62_A TOLL-like receptor 4, v 99.9 1.2E-26 4E-31 241.1 19.1 109 110-218 29-137 (276)
321 2z62_A TOLL-like receptor 4, v 99.9 2.6E-26 9E-31 238.4 20.9 227 162-441 12-242 (276)
322 2o6q_A Variable lymphocyte rec 99.9 2E-25 7E-30 230.9 22.1 181 110-316 38-218 (270)
323 3rfs_A Internalin B, repeat mo 99.9 3E-26 1E-30 237.4 12.5 163 255-424 85-247 (272)
324 3rfs_A Internalin B, repeat mo 99.9 1.8E-25 6.2E-30 231.5 17.8 208 106-350 38-245 (272)
325 3ogk_B Coronatine-insensitive 99.9 2.2E-28 7.4E-33 282.6 -4.9 349 85-437 113-527 (592)
326 1p9a_G Platelet glycoprotein I 99.9 7.7E-25 2.6E-29 228.8 19.8 181 104-316 5-185 (290)
327 3m19_A Variable lymphocyte rec 99.9 8.7E-25 3E-29 223.6 18.6 190 71-316 3-192 (251)
328 1p9a_G Platelet glycoprotein I 99.9 1.1E-24 3.6E-29 227.7 19.4 203 153-388 6-208 (290)
329 4glp_A Monocyte differentiatio 99.9 2.6E-25 8.9E-30 235.0 13.3 160 157-316 91-264 (310)
330 3goz_A Leucine-rich repeat-con 99.9 4.4E-27 1.5E-31 254.3 -1.2 258 114-393 3-302 (362)
331 3goz_A Leucine-rich repeat-con 99.9 1.2E-26 4E-31 251.0 1.4 230 137-388 2-266 (362)
332 4glp_A Monocyte differentiatio 99.9 2.3E-25 8E-30 235.4 10.3 228 109-341 64-308 (310)
333 4azs_A Methyltransferase WBDD; 99.9 2.2E-26 7.6E-31 262.0 2.6 162 508-679 241-438 (569)
334 2xwt_C Thyrotropin receptor; s 99.9 1.1E-24 3.8E-29 221.0 14.7 183 134-342 32-220 (239)
335 2ast_B S-phase kinase-associat 99.9 2.3E-26 7.8E-31 246.0 2.2 103 112-218 50-156 (336)
336 3ogk_B Coronatine-insensitive 99.9 2.3E-27 7.8E-32 274.0 -6.7 203 107-311 110-326 (592)
337 2xwt_C Thyrotropin receptor; s 99.9 2.2E-24 7.4E-29 218.9 16.1 68 158-225 32-101 (239)
338 2ca6_A RAN GTPase-activating p 99.9 1.1E-26 3.8E-31 253.5 -1.3 186 254-439 93-319 (386)
339 2o6s_A Variable lymphocyte rec 99.9 1.9E-24 6.6E-29 214.3 14.9 186 71-280 5-190 (208)
340 2ca6_A RAN GTPase-activating p 99.9 1.1E-26 3.9E-31 253.4 -2.0 257 125-415 24-319 (386)
341 2ast_B S-phase kinase-associat 99.9 1.5E-25 5.1E-30 239.6 4.1 251 134-441 48-311 (336)
342 3m19_A Variable lymphocyte rec 99.9 2.1E-23 7.1E-28 213.3 18.7 180 257-439 16-195 (251)
343 4ay9_X Follicle-stimulating ho 99.9 1.7E-23 6E-28 224.9 16.4 223 109-361 30-256 (350)
344 4ay9_X Follicle-stimulating ho 99.9 2.2E-23 7.6E-28 224.0 17.1 241 137-434 13-257 (350)
345 1h6u_A Internalin H; cell adhe 99.9 1.8E-23 6.2E-28 220.5 16.1 207 137-387 23-229 (308)
346 1h6u_A Internalin H; cell adhe 99.9 1.2E-23 3.9E-28 222.0 13.9 198 105-344 37-234 (308)
347 2p1m_B Transport inhibitor res 99.9 7.6E-26 2.6E-30 261.3 -8.4 349 107-458 103-518 (594)
348 3cvr_A Invasion plasmid antige 99.9 4E-23 1.4E-27 233.9 13.8 188 110-351 60-254 (571)
349 2p1m_B Transport inhibitor res 99.9 3.2E-25 1.1E-29 256.1 -5.2 349 84-436 105-519 (594)
350 3cvr_A Invasion plasmid antige 99.9 5.1E-22 1.7E-26 224.8 15.3 189 134-376 60-255 (571)
351 2o6s_A Variable lymphocyte rec 99.9 1E-21 3.4E-26 194.7 15.4 178 112-325 10-187 (208)
352 3e6j_A Variable lymphocyte rec 99.9 5.1E-21 1.7E-25 192.5 15.7 158 70-243 16-173 (229)
353 3en9_A Glycoprotease, O-sialog 99.8 2E-22 6.7E-27 228.2 3.8 159 504-679 339-538 (540)
354 4b8c_D Glucose-repressible alc 99.8 1.7E-22 5.9E-27 237.0 1.3 221 34-272 129-358 (727)
355 2v9t_B SLIT homolog 2 protein 99.8 1.5E-20 5E-25 187.9 14.3 134 109-242 32-165 (220)
356 2xot_A Amphoterin-induced prot 99.8 1E-20 3.5E-25 204.1 14.2 177 258-437 21-203 (361)
357 1h6t_A Internalin B; cell adhe 99.8 4.4E-21 1.5E-25 200.4 10.5 78 135-218 26-103 (291)
358 1m9s_A Internalin B; cell inva 99.8 5.4E-21 1.9E-25 218.8 11.2 171 130-316 40-210 (605)
359 1m9s_A Internalin B; cell inva 99.8 9.6E-21 3.3E-25 216.7 12.6 194 131-366 19-212 (605)
360 2v70_A SLIT-2, SLIT homolog 2 99.8 3.1E-20 1.1E-24 185.5 14.7 154 258-438 14-168 (220)
361 1h6t_A Internalin B; cell adhe 99.8 1.3E-20 4.5E-25 196.8 12.1 171 253-437 44-214 (291)
362 2v9t_B SLIT homolog 2 protein 99.8 4.5E-20 1.5E-24 184.4 15.4 151 258-411 14-164 (220)
363 2v70_A SLIT-2, SLIT homolog 2 99.8 2.7E-20 9.2E-25 186.0 13.4 135 109-243 32-167 (220)
364 1dce_A Protein (RAB geranylger 99.8 9.9E-23 3.4E-27 231.8 -5.7 217 130-406 346-567 (567)
365 2xot_A Amphoterin-induced prot 99.8 3.8E-20 1.3E-24 199.6 14.0 81 136-219 21-102 (361)
366 1dce_A Protein (RAB geranylger 99.8 1.5E-22 5.1E-27 230.4 -5.2 166 217-430 397-567 (567)
367 1zar_A RIO2 kinase; serine kin 99.8 1.5E-20 5.1E-25 195.0 9.2 145 492-664 81-274 (282)
368 3e6j_A Variable lymphocyte rec 99.8 2.2E-19 7.5E-24 180.5 16.0 154 257-414 21-174 (229)
369 3sb4_A Hypothetical leucine ri 99.8 1E-20 3.6E-25 201.4 4.0 289 108-429 24-327 (329)
370 1xeu_A Internalin C; cellular 99.8 4.7E-20 1.6E-24 189.5 8.6 172 131-343 17-188 (263)
371 1xeu_A Internalin C; cellular 99.8 3.8E-20 1.3E-24 190.2 5.5 168 108-292 18-185 (263)
372 4b8c_D Glucose-repressible alc 99.8 6E-20 2.1E-24 215.4 4.1 177 109-321 173-359 (727)
373 3sb4_A Hypothetical leucine ri 99.8 8.6E-19 3E-23 186.5 12.4 261 108-381 48-327 (329)
374 4ezg_A Putative uncharacterize 99.8 2.4E-18 8E-23 168.7 13.4 151 253-411 42-193 (197)
375 4ezg_A Putative uncharacterize 99.8 2.3E-18 7.9E-23 168.8 12.9 154 276-437 41-195 (197)
376 1w8a_A SLIT protein; signaling 99.7 7.8E-18 2.7E-22 164.3 12.6 112 110-221 30-142 (192)
377 2o6r_A Variable lymphocyte rec 99.7 1.4E-17 4.8E-22 160.2 13.4 137 71-222 5-141 (177)
378 1w8a_A SLIT protein; signaling 99.7 3.1E-18 1.1E-22 167.1 8.8 132 282-416 11-143 (192)
379 4fdw_A Leucine rich hypothetic 99.7 8.6E-17 3E-21 175.0 19.5 270 108-435 112-382 (401)
380 4fdw_A Leucine rich hypothetic 99.7 1.3E-16 4.5E-21 173.6 19.3 242 157-437 113-359 (401)
381 2ell_A Acidic leucine-rich nuc 99.7 1.6E-17 5.3E-22 158.4 9.3 133 107-241 22-159 (168)
382 2je0_A Acidic leucine-rich nuc 99.7 1.2E-17 4.1E-22 155.7 6.4 130 106-237 14-148 (149)
383 2ell_A Acidic leucine-rich nuc 99.7 7.1E-17 2.4E-21 153.8 11.9 131 279-411 24-159 (168)
384 2wfh_A SLIT homolog 2 protein 99.7 1.1E-16 3.7E-21 156.1 12.6 109 109-218 31-139 (193)
385 2o6r_A Variable lymphocyte rec 99.7 1.6E-16 5.4E-21 152.7 12.3 130 111-243 9-138 (177)
386 2je0_A Acidic leucine-rich nuc 99.7 9.5E-17 3.3E-21 149.6 10.0 127 279-431 17-148 (149)
387 1zth_A RIO1 serine protein kin 99.7 2.5E-16 8.5E-21 161.2 12.5 126 494-630 40-220 (258)
388 4fs7_A Uncharacterized protein 99.7 3.5E-15 1.2E-19 162.7 21.9 315 100-433 62-376 (394)
389 2wfh_A SLIT homolog 2 protein 99.7 4.5E-16 1.5E-20 151.8 13.2 109 328-437 32-140 (193)
390 1a9n_A U2A', U2A'; complex (nu 99.6 4.6E-16 1.6E-20 149.4 6.7 131 104-240 14-151 (176)
391 4gyi_A RIO2 kinase; protein ki 99.6 1.6E-15 5.4E-20 161.3 9.3 125 494-630 88-266 (397)
392 1ds9_A Outer arm dynein; leuci 99.6 1.8E-17 6E-22 162.6 -5.5 149 257-436 20-185 (198)
393 1a9n_A U2A', U2A'; complex (nu 99.6 2.5E-15 8.5E-20 144.2 9.6 108 276-388 16-126 (176)
394 1ds9_A Outer arm dynein; leuci 99.6 2.6E-17 9E-22 161.4 -4.4 115 322-441 43-158 (198)
395 4fs7_A Uncharacterized protein 99.6 3.5E-14 1.2E-18 154.8 19.6 296 120-433 58-353 (394)
396 3g39_A Variable lymphocyte rec 99.6 1.1E-14 3.7E-19 138.8 11.6 105 113-220 13-117 (170)
397 2r9u_A Variable lymphocyte rec 99.5 2.6E-14 8.9E-19 136.7 11.4 104 113-219 16-119 (174)
398 3g39_A Variable lymphocyte rec 99.5 3.1E-14 1.1E-18 135.7 10.2 106 135-243 11-116 (170)
399 4gt6_A Cell surface protein; l 99.5 1.1E-12 3.9E-17 142.7 21.8 319 100-434 54-389 (394)
400 2r9u_A Variable lymphocyte rec 99.5 7.3E-14 2.5E-18 133.5 10.3 104 136-242 15-118 (174)
401 4gt6_A Cell surface protein; l 99.4 6E-12 2E-16 137.0 20.6 299 100-411 78-390 (394)
402 2ifg_A High affinity nerve gro 99.4 6.6E-13 2.3E-17 142.0 10.7 89 129-218 27-116 (347)
403 2ifg_A High affinity nerve gro 99.4 5E-13 1.7E-17 142.9 9.6 109 73-195 8-117 (347)
404 3un9_A NLR family member X1; l 99.4 1.6E-14 5.6E-19 155.5 -2.2 167 255-421 72-261 (372)
405 3un9_A NLR family member X1; l 99.4 5.8E-14 2E-18 151.2 -0.3 160 278-437 71-253 (372)
406 4h09_A Hypothetical leucine ri 99.2 3E-10 1E-14 122.8 21.2 131 273-407 211-341 (379)
407 4h09_A Hypothetical leucine ri 99.2 1.2E-09 4.2E-14 118.0 22.4 284 100-398 60-355 (379)
408 3rw6_A Nuclear RNA export fact 99.0 1.5E-12 5E-17 132.0 -9.3 140 71-222 76-237 (267)
409 2ra8_A Uncharacterized protein 99.0 1E-10 3.6E-15 124.7 1.3 83 278-362 251-341 (362)
410 2ra8_A Uncharacterized protein 99.0 1.3E-10 4.6E-15 123.9 2.1 85 301-386 250-341 (362)
411 3tm0_A Aminoglycoside 3'-phosp 98.9 2.4E-09 8.4E-14 109.2 10.2 124 496-628 9-213 (263)
412 1nd4_A Aminoglycoside 3'-phosp 98.8 1.2E-08 4.1E-13 103.7 8.4 119 499-628 18-214 (264)
413 3rw6_A Nuclear RNA export fact 98.6 2.5E-08 8.6E-13 100.9 4.8 104 324-429 138-257 (267)
414 1io0_A Tropomodulin; LRR prote 98.5 2.8E-08 9.7E-13 95.5 3.3 63 374-436 92-164 (185)
415 3dxp_A Putative acyl-COA dehyd 98.5 2.4E-07 8.3E-12 99.1 10.4 119 505-629 42-249 (359)
416 1io0_A Tropomodulin; LRR prote 98.5 3.3E-08 1.1E-12 95.0 2.3 87 326-412 64-164 (185)
417 3sg8_A APH(2'')-ID; antibiotic 98.4 1.4E-07 4.9E-12 98.3 3.9 161 506-679 25-287 (304)
418 3r70_A Aminoglycoside phosphot 98.0 1.5E-05 5E-10 83.6 9.1 118 502-629 38-238 (320)
419 3e4g_A ATP synthase subunit S, 97.7 1.9E-05 6.5E-10 74.0 4.5 80 305-384 63-148 (176)
420 3e4g_A ATP synthase subunit S, 97.7 1.4E-05 4.7E-10 75.0 3.5 84 327-410 61-150 (176)
421 4gkh_A Aminoglycoside 3'-phosp 97.6 0.00012 4E-09 74.5 8.9 114 508-628 31-223 (272)
422 3tdw_A Gentamicin resistance p 97.5 0.00016 5.6E-09 75.0 8.8 114 506-628 24-224 (306)
423 3ovc_A Hygromycin-B 4-O-kinase 97.5 0.00021 7.1E-09 76.1 8.5 32 598-629 213-244 (362)
424 1pgv_A TMD-1, tropomodulin TMD 97.4 9.1E-05 3.1E-09 70.7 4.7 61 375-435 98-169 (197)
425 3ats_A Putative uncharacterize 97.3 0.00053 1.8E-08 72.7 9.2 31 598-628 222-252 (357)
426 2q83_A YTAA protein; 2635576, 97.3 0.00045 1.5E-08 72.7 8.2 31 598-628 222-252 (346)
427 1pgv_A TMD-1, tropomodulin TMD 97.2 0.00011 3.8E-09 70.1 2.5 87 325-411 68-169 (197)
428 3d1u_A Putative fructosamine-3 97.2 0.00084 2.9E-08 68.8 9.0 57 504-560 18-97 (288)
429 2yle_A Protein spire homolog 1 97.0 0.0027 9.3E-08 60.8 9.3 102 559-678 34-135 (229)
430 2olc_A MTR kinase, methylthior 96.9 0.0022 7.6E-08 69.0 9.5 31 598-629 227-257 (397)
431 3rfe_A Platelet glycoprotein I 96.8 0.0015 5.3E-08 58.0 6.1 35 135-169 33-67 (130)
432 2pyw_A Uncharacterized protein 96.8 0.0041 1.4E-07 67.5 10.4 77 598-676 232-313 (420)
433 3rfe_A Platelet glycoprotein I 96.8 0.0019 6.6E-08 57.4 6.2 55 161-217 12-67 (130)
434 3dxq_A Choline/ethanolamine ki 96.7 0.0067 2.3E-07 62.5 10.6 30 599-629 174-203 (301)
435 2ppq_A HSK, HK, homoserine kin 96.5 0.0089 3.1E-07 62.1 10.1 138 490-628 6-217 (322)
436 3f7w_A Putative fructosamine-3 96.3 0.0082 2.8E-07 61.3 8.1 34 502-535 16-49 (288)
437 3jr1_A Putative fructosamine-3 96.1 0.0086 2.9E-07 61.9 7.5 55 505-560 40-118 (312)
438 3csv_A Aminoglycoside phosphot 95.9 0.021 7.3E-07 59.5 9.7 32 598-629 183-218 (333)
439 1zyl_A Hypothetical protein YI 95.9 0.037 1.2E-06 57.5 11.3 28 599-628 196-223 (328)
440 3i1a_A Spectinomycin phosphotr 95.2 0.055 1.9E-06 56.6 9.4 32 598-629 206-237 (339)
441 3g15_A CK, chetk-alpha, cholin 93.3 0.13 4.3E-06 55.2 7.3 29 600-628 246-280 (401)
442 3feg_A Choline/ethanolamine ki 91.9 0.27 9.4E-06 52.0 7.5 30 599-628 221-254 (379)
443 3mes_A Choline kinase; malaria 88.0 1.2 4E-05 47.8 8.6 29 599-628 263-291 (424)
444 3c5i_A Choline kinase; choline 79.3 1.7 5.7E-05 45.6 5.0 29 599-628 213-241 (369)
445 2qg7_A Ethanolamine kinase PV0 79.1 1.3 4.5E-05 48.0 4.2 15 599-613 291-305 (458)
446 1nw1_A Choline kinase (49.2 KD 72.9 1.4 4.7E-05 47.5 2.2 30 599-628 250-307 (429)
447 3f2s_A CK, chetk-alpha, cholin 68.2 2.3 8E-05 45.1 2.7 30 599-628 245-280 (401)
448 4ano_A ESSB; membrane protein, 65.4 6.1 0.00021 37.8 4.7 82 573-682 82-165 (219)
449 2lz0_A Uncharacterized protein 62.8 16 0.00054 30.0 6.3 46 120-166 7-52 (100)
450 4ann_A ESSB; membrane protein, 59.3 5.4 0.00019 38.0 3.1 83 572-682 77-160 (215)
451 2lz0_A Uncharacterized protein 47.6 36 0.0012 27.8 6.0 47 144-191 7-53 (100)
452 1cja_A Protein (actin-fragmin 23.5 1.1E+02 0.0039 31.0 6.0 77 547-628 156-237 (342)
453 3ls8_A Phosphatidylinositol 3- 23.2 1.4E+02 0.0047 33.1 7.2 46 575-627 454-501 (614)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.9e-58 Score=549.12 Aligned_cols=433 Identities=33% Similarity=0.487 Sum_probs=285.6
Q ss_pred hhcCCCCHHHHHHHHHHHHccccCCccccCCCCccccCCCCCCCCcccceeeCCCCCEEEEEcCCCCCccc---ccc---
Q 041438 29 LAVSSNSTEEAHALVKWKASLEVHSRSLLHSWSLSFVNATKISLCTWSGIHCNHAGRVFGINLTSISLNGT---LLE--- 102 (752)
Q Consensus 29 ~~~~~~~~~~~~aLl~fk~~~~~~~~~~l~sW~~~~~~~~~~~~c~w~gv~C~~~~~v~~l~l~~~~l~g~---l~~--- 102 (752)
++++++.++|++|||+||+++. ||. .+++|+ . +.+||.|.||+|+ .++|+.++|++.++.|. +++
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~-~~~-~l~~W~----~--~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~ 74 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLP-DKN-LLPDWS----S--NKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLL 74 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCS-CTT-SSTTCC----T--TSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTT
T ss_pred CccccCCHHHHHHHHHHHhhCC-Ccc-cccCCC----C--CCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHh
Confidence 3444556889999999999997 666 899996 2 2489999999998 89999999999999887 432
Q ss_pred -------------------cccCCCCCCCEEECCCCcccccCCc--cCcCCCCCCeeecCCCcccccCCccc--------
Q 041438 103 -------------------FSFSSFPHLAYLDLYNNELFDIIPP--QISNLSKLEYLDFLTNKLSGHIPSEI-------- 153 (752)
Q Consensus 103 -------------------~~f~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~-------- 153 (752)
..|+.+++|++|||++|.+++.+|. .|+++++|++|+|++|.+++.+|..+
T Consensus 75 ~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~ 154 (768)
T 3rgz_A 75 SLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLE 154 (768)
T ss_dssp TCTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCS
T ss_pred ccCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCC
Confidence 4677888888888888888877776 67777777766666666655444332
Q ss_pred ------------------------------------------ccccccceeeccCcccCCCCCcccCCCCCCcEEEccCC
Q 041438 154 ------------------------------------------SLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSN 191 (752)
Q Consensus 154 ------------------------------------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 191 (752)
..+++|++|+|++|.+++.+|. ++++++|++|+|++|
T Consensus 155 ~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n 233 (768)
T 3rgz_A 155 VLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGN 233 (768)
T ss_dssp EEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSS
T ss_pred EEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCC
Confidence 1233333444444444443333 444455555555555
Q ss_pred CCCCcCC----------------------------------------------cCccCC-CcceEEeecccccccccccc
Q 041438 192 FLGGSIP----------------------------------------------RSLSNF-TNLVFLYLYNNSFSGSIPQQ 224 (752)
Q Consensus 192 ~l~~~~p----------------------------------------------~~~~~l-~~L~~L~L~~N~l~~~~p~~ 224 (752)
++++.+| ..+.++ ++|++|+|++|++++.+|..
T Consensus 234 ~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~ 313 (768)
T 3rgz_A 234 KLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPF 313 (768)
T ss_dssp CCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGG
T ss_pred cCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchH
Confidence 4444333 333332 55666666666665555555
Q ss_pred ccCccccccccccccccCCCcC-------------------------CCC------------------------------
Q 041438 225 IGNLKSLFDMKLCINQLNGAIP-------------------------LSI------------------------------ 249 (752)
Q Consensus 225 ~~~l~~L~~l~l~~N~l~~~~~-------------------------~~~------------------------------ 249 (752)
|+++++|++|++++|++++.+| ..+
T Consensus 314 ~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~ 393 (768)
T 3rgz_A 314 FGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 393 (768)
T ss_dssp GGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTT
T ss_pred HhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhccc
Confidence 5555555555555444432222 100
Q ss_pred -------------------CCCCCCCCcEEEccccccCCCCCcccC------------------------CCCCCCEEec
Q 041438 250 -------------------DWGRCPQLSLLDVSINNITGNIPFEIG------------------------ESPQLQYLDL 286 (752)
Q Consensus 250 -------------------~~~~l~~L~~L~Ls~N~l~~~~p~~~~------------------------~l~~L~~L~L 286 (752)
.+..+++|++|++++|++++.+|..+. .+++|++|+|
T Consensus 394 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 473 (768)
T 3rgz_A 394 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLIL 473 (768)
T ss_dssp CCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEEC
T ss_pred CCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEe
Confidence 012233444444444444444443333 3334444444
Q ss_pred CCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhcc-----------------
Q 041438 287 SSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGS----------------- 349 (752)
Q Consensus 287 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~----------------- 349 (752)
++|++++.+|..+.++++|+.|+|++|++++.+|.+++.+++|++|+|++|++++.+|..++.
T Consensus 474 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 553 (768)
T 3rgz_A 474 DFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGT 553 (768)
T ss_dssp CSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESB
T ss_pred cCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCc
Confidence 444444444444455555555555555555555555555555555555555554444433333
Q ss_pred -----------------------------------------------------------------------------ccc
Q 041438 350 -----------------------------------------------------------------------------LVK 352 (752)
Q Consensus 350 -----------------------------------------------------------------------------l~~ 352 (752)
+++
T Consensus 554 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~ 633 (768)
T 3rgz_A 554 IPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGS 633 (768)
T ss_dssp CCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBC
T ss_pred CChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhcccc
Confidence 345
Q ss_pred ccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCchhhhccCCCcEEEccC
Q 041438 353 LYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISY 432 (752)
Q Consensus 353 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 432 (752)
|++|||++|+++|.+|..++++++|+.|+|++|++++.+|..++.+++|+.|||++|+++|.+|..+..+++|++||+++
T Consensus 634 L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~ 713 (768)
T 3rgz_A 634 MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSN 713 (768)
T ss_dssp CCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCS
T ss_pred ccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcC
Confidence 66777777777788888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcCCCCcccCCCCcccccCCCCCCCCccccccccccc
Q 041438 433 NKLEGHIPNSTTFRDAPLEALQGNKGLCGDIRGFLSCMSYR 473 (752)
Q Consensus 433 N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~~~~c~~~~ 473 (752)
|+++|.+|....|..++...+.||+++||.+ +..|....
T Consensus 714 N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~--l~~C~~~~ 752 (768)
T 3rgz_A 714 NNLSGPIPEMGQFETFPPAKFLNNPGLCGYP--LPRCDPSN 752 (768)
T ss_dssp SEEEEECCSSSSGGGSCGGGGCSCTEEESTT--SCCCCSCC
T ss_pred CcccccCCCchhhccCCHHHhcCCchhcCCC--CcCCCCCc
Confidence 9999999999999999999999999999964 33786544
No 2
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6e-53 Score=490.79 Aligned_cols=409 Identities=20% Similarity=0.279 Sum_probs=293.9
Q ss_pred CHHHHHHHHHHHHccccCCcc-------ccCCCCccccCCCCCCCCcc---cceeeCCCCCEEEEEcCCCCCcccccccc
Q 041438 35 STEEAHALVKWKASLEVHSRS-------LLHSWSLSFVNATKISLCTW---SGIHCNHAGRVFGINLTSISLNGTLLEFS 104 (752)
Q Consensus 35 ~~~~~~aLl~fk~~~~~~~~~-------~l~sW~~~~~~~~~~~~c~w---~gv~C~~~~~v~~l~l~~~~l~g~l~~~~ 104 (752)
...|+.||.+||+++..+++. ...+|+ .+.+||.| .||+|+..|+|++++|+++++.|+++ .+
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~------~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp-~~ 100 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWN------FNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVP-DA 100 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCC------CSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEEC-GG
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCC------CCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCC-hH
Confidence 456999999999998755433 233676 23589999 99999888999999999999999987 48
Q ss_pred cCCCCCCCEEECCCC-----------------------------------------------------------------
Q 041438 105 FSSFPHLAYLDLYNN----------------------------------------------------------------- 119 (752)
Q Consensus 105 f~~l~~L~~L~L~~n----------------------------------------------------------------- 119 (752)
|+.|++|++|+|++|
T Consensus 101 l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 180 (636)
T 4eco_A 101 IGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSR 180 (636)
T ss_dssp GGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCC
T ss_pred HhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccc
Confidence 999999999999998
Q ss_pred -------------cccccCCccCcCCCCCCeeecCCCccccc-----------------CCcccc--cccccceeeccCc
Q 041438 120 -------------ELFDIIPPQISNLSKLEYLDFLTNKLSGH-----------------IPSEIS--LLTHLTILHISRN 167 (752)
Q Consensus 120 -------------~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~Ls~N 167 (752)
++++ +|..|+++++|++|+|++|+|++. +|..++ ++++|++|+|++|
T Consensus 181 ~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n 259 (636)
T 4eco_A 181 ITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNC 259 (636)
T ss_dssp CCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECC
T ss_pred cchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCC
Confidence 4446 788999999999999999999996 899999 9999999999999
Q ss_pred ccCCCCCcccCCCCCCcEEEccCCC-CCC-cCCcCccCC------CcceEEeeccccccccccc--cccCcccccccccc
Q 041438 168 QLNGSIPHEVGQLNFLNHLILDSNF-LGG-SIPRSLSNF------TNLVFLYLYNNSFSGSIPQ--QIGNLKSLFDMKLC 237 (752)
Q Consensus 168 ~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~l~l~ 237 (752)
++.+.+|..|+++++|++|+|++|+ ++| .+|..++++ ++|++|+|++|+++ .+|. .|+++++|+.|+++
T Consensus 260 ~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~ 338 (636)
T 4eco_A 260 PNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECL 338 (636)
T ss_dssp TTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECC
T ss_pred cCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCc
Confidence 9999999999999999999999998 998 788877776 88888888888888 6777 78888888888888
Q ss_pred ccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCC-CCEEecCCCcCcCCCCccccCCc--ccCEEEccCCc
Q 041438 238 INQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQ-LQYLDLSSNYIVGEIPTQLGNII--YLNRISLSGNK 314 (752)
Q Consensus 238 ~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~ 314 (752)
+|+++|.+| .++.+++|++|++++|+++ .+|..+..+++ |++|++++|.++ .+|..+..+. +|+.|++++|+
T Consensus 339 ~N~l~g~ip---~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~ 413 (636)
T 4eco_A 339 YNQLEGKLP---AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNE 413 (636)
T ss_dssp SCCCEEECC---CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSC
T ss_pred CCcCccchh---hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCc
Confidence 888887777 3455566666666666665 45555666665 666666666665 4555554433 55555555555
Q ss_pred CcccCCcccC-------CCcccceeeccccccccccchhhcccc-------------------------------cccEE
Q 041438 315 LSGRIPGELG-------SLINLEYLDLSANHLSNFVLESLGSLV-------------------------------KLYYL 356 (752)
Q Consensus 315 l~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~~~~~~~l~-------------------------------~L~~L 356 (752)
+++.+|..+. .+++|++|+|++|.++.+++..+..++ +|++|
T Consensus 414 l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L 493 (636)
T 4eco_A 414 IGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSI 493 (636)
T ss_dssp TTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEE
T ss_pred CCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEE
Confidence 5555555554 444555555555555544433333344 55555
Q ss_pred EcCCCcCccccchhcc--ccccCCeeecCCccCCCCCCcccccccccceEEc------cCCcCCcCCchhhhccCCCcEE
Q 041438 357 NLSHNKLSQQIPIELD--NLIHLSELDLSHNFLGEKISSRICRMESLEKLNL------SYNNLSGLIPRCFEELHGLLHI 428 (752)
Q Consensus 357 ~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L------~~N~l~~~~p~~~~~l~~L~~L 428 (752)
+|++|+++ .+|..+. .+++|++|+|++|++++ +|..+..+++|+.|+| ++|++.+.+|..+..+++|++|
T Consensus 494 ~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L 571 (636)
T 4eco_A 494 DLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQL 571 (636)
T ss_dssp ECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEE
T ss_pred ECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEE
Confidence 55555555 3444444 66666666666666665 5556666666666666 3455666666666666666666
Q ss_pred EccCCcccCcCCCCcccCCCCcccccCCCCCCC
Q 041438 429 DISYNKLEGHIPNSTTFRDAPLEALQGNKGLCG 461 (752)
Q Consensus 429 ~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~ 461 (752)
+|++|++ +.+|.... ..+....+.+|+..|-
T Consensus 572 ~Ls~N~l-~~ip~~~~-~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 572 QIGSNDI-RKVNEKIT-PNISVLDIKDNPNISI 602 (636)
T ss_dssp ECCSSCC-CBCCSCCC-TTCCEEECCSCTTCEE
T ss_pred ECCCCcC-CccCHhHh-CcCCEEECcCCCCccc
Confidence 6666666 55554422 4444555666666654
No 3
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.1e-51 Score=485.98 Aligned_cols=383 Identities=20% Similarity=0.269 Sum_probs=287.6
Q ss_pred CCCHHHHHHHHHHHHccccCCccccCCCCccccCCCCCCC--Ccc------------cceeeCCCCCEEEEEcCCCCCcc
Q 041438 33 SNSTEEAHALVKWKASLEVHSRSLLHSWSLSFVNATKISL--CTW------------SGIHCNHAGRVFGINLTSISLNG 98 (752)
Q Consensus 33 ~~~~~~~~aLl~fk~~~~~~~~~~l~sW~~~~~~~~~~~~--c~w------------~gv~C~~~~~v~~l~l~~~~l~g 98 (752)
++..+|++||++||+++. +| +|+.+... ...+| |.| .||+|+..++|+.++|+++++.|
T Consensus 265 ~~~~~d~~ALl~~k~~l~-~~-----~W~~~~~~-~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G 337 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALD-GK-----NWRYYSGT-INNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKG 337 (876)
T ss_dssp CHHHHHHHHHHHHHHHTT-GG-----GCCCCCSS-CSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEE
T ss_pred ccchHHHHHHHHHHHHcC-CC-----CCCcCCCc-ccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCC
Confidence 345679999999999985 33 89733200 01244 999 99999988999999999999999
Q ss_pred cccccccCCCCCCCEEEC-CCCccccc-----------------------------------------------------
Q 041438 99 TLLEFSFSSFPHLAYLDL-YNNELFDI----------------------------------------------------- 124 (752)
Q Consensus 99 ~l~~~~f~~l~~L~~L~L-~~n~l~~~----------------------------------------------------- 124 (752)
.++ .+|+.|++|++|+| ++|.++|.
T Consensus 338 ~ip-~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~ 416 (876)
T 4ecn_A 338 RVP-DAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKP 416 (876)
T ss_dssp EEC-GGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCC
T ss_pred cCc-hHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccc
Confidence 987 48999999999999 77765544
Q ss_pred -----------------------CCccCcCCCCCCeeecCCCcccc-----------------cCCcccc--ccccccee
Q 041438 125 -----------------------IPPQISNLSKLEYLDFLTNKLSG-----------------HIPSEIS--LLTHLTIL 162 (752)
Q Consensus 125 -----------------------~p~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~~~--~l~~L~~L 162 (752)
+|..|+++++|++|+|++|+|++ .+|..++ ++++|++|
T Consensus 417 i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L 496 (876)
T 4ecn_A 417 IKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDV 496 (876)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEE
T ss_pred cccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEE
Confidence 78889999999999999999998 3888887 99999999
Q ss_pred eccCcccCCCCCcccCCCCCCcEEEccCCC-CCC-cCCcCccCCC-------cceEEeeccccccccccc--cccCcccc
Q 041438 163 HISRNQLNGSIPHEVGQLNFLNHLILDSNF-LGG-SIPRSLSNFT-------NLVFLYLYNNSFSGSIPQ--QIGNLKSL 231 (752)
Q Consensus 163 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~p~--~~~~l~~L 231 (752)
+|++|.+.+.+|..|+++++|++|+|++|+ ++| .+|..+++++ +|++|+|++|+|+ .+|. .|+++++|
T Consensus 497 ~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L 575 (876)
T 4ecn_A 497 ELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKL 575 (876)
T ss_dssp EEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTC
T ss_pred ECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCC
Confidence 999999999999999999999999999998 998 8888776665 9999999999999 7888 89999999
Q ss_pred ccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCC-CCEEecCCCcCcCCCCccccCCcc--cCEE
Q 041438 232 FDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQ-LQYLDLSSNYIVGEIPTQLGNIIY--LNRI 308 (752)
Q Consensus 232 ~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L 308 (752)
+.|++++|+++ .+| .|+.+++|+.|+|++|+++ .+|..+..+++ |++|+|++|.|+ .+|..+..+.. |+.|
T Consensus 576 ~~L~Ls~N~l~-~lp---~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L 649 (876)
T 4ecn_A 576 GLLDCVHNKVR-HLE---AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSV 649 (876)
T ss_dssp CEEECTTSCCC-BCC---CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEE
T ss_pred CEEECCCCCcc-cch---hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEE
Confidence 99999999999 666 5788999999999999999 78888999998 999999999998 67877776654 8888
Q ss_pred EccCCcCcccCCccc---C--CCcccceeeccccccccccchhhcccccccEEEcCCCcCccccchhcc-------cccc
Q 041438 309 SLSGNKLSGRIPGEL---G--SLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELD-------NLIH 376 (752)
Q Consensus 309 ~Ls~N~l~~~~p~~~---~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-------~l~~ 376 (752)
+|++|++++.+|... . .+++|+.|+|++|.++.++...+..+++|+.|+|++|+|+...+..+. ++++
T Consensus 650 ~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~ 729 (876)
T 4ecn_A 650 DFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYL 729 (876)
T ss_dssp ECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGG
T ss_pred ECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCC
Confidence 888888877655322 1 223566666666666654444444555555555555555422222221 1124
Q ss_pred CCeeecCCccCCCCCCcccc--cccccceEEccCCcCCcCCchhhhccCCCcEEEccC
Q 041438 377 LSELDLSHNFLGEKISSRIC--RMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISY 432 (752)
Q Consensus 377 L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 432 (752)
|++|+|++|+|+ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++
T Consensus 730 L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~ 785 (876)
T 4ecn_A 730 LTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRH 785 (876)
T ss_dssp CCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCC
T ss_pred ccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCC
Confidence 555555555554 3333333 44555555555555544 344444455555554433
No 4
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.4e-48 Score=411.06 Aligned_cols=226 Identities=27% Similarity=0.340 Sum_probs=189.7
Q ss_pred cccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC------------------------CccccCCceEEEEEec
Q 041438 501 NDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD------------------------NFCSHPRQSFIVYEYL 555 (752)
Q Consensus 501 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------------------------~~~~~~~~~~lV~E~~ 555 (752)
..|++.++||+|+||.||+|+. .+|+.||||+++..... +++.+.+..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 5699999999999999999995 57999999998543221 4456778899999999
Q ss_pred cCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCCCC
Q 041438 556 ESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN 635 (752)
Q Consensus 556 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 635 (752)
++|+|.+++.+. .+++.+++.|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+......
T Consensus 154 ~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 226 (346)
T 4fih_A 154 EGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 226 (346)
T ss_dssp TTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC
T ss_pred CCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc
Confidence 999999999753 389999999999999999999999 9999999999999999999999999999988765555
Q ss_pred cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHHHHHH
Q 041438 636 WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKFMSI 715 (752)
Q Consensus 636 ~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 715 (752)
....+||+.|||||++.+..|+.++||||+||++|||++|++||.. ....+....+.....+. .......++++
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~-----~~~~~~~~~i~~~~~~~-~~~~~~~s~~~ 300 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-----EPPLKAMKMIRDNLPPR-LKNLHKVSPSL 300 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT-----SCHHHHHHHHHHSSCCC-CSCGGGSCHHH
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-----cCHHHHHHHHHcCCCCC-CCccccCCHHH
Confidence 6667999999999999999999999999999999999999999952 12222233333332221 11234567789
Q ss_pred HHHHHhccCcCCCCCCCHHHHHHH
Q 041438 716 MQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 716 ~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.++|.+||++||++|||++|+++|
T Consensus 301 ~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 301 KGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHcCCChhHCcCHHHHhcC
Confidence 999999999999999999999986
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=9.5e-49 Score=414.81 Aligned_cols=228 Identities=22% Similarity=0.328 Sum_probs=184.7
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccCCceEEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIVY 552 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV~ 552 (752)
.++|++.+.||+|+||+||+|+. .+|+.||||+++..... +++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 36899999999999999999994 67999999998654322 4556778899999
Q ss_pred EeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCC
Q 041438 553 EYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLD 632 (752)
Q Consensus 553 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~ 632 (752)
|||+||+|.+++..... ..+++.+++.|+.||+.||+|||++ |||||||||+|||+++++.+||+|||+|+.....
T Consensus 103 Ey~~gg~L~~~i~~~~~-~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKG-VLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp ECCTTCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred eCCCCCcHHHHHHHcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 99999999999975432 3478899999999999999999999 9999999999999999999999999999876533
Q ss_pred CCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHHH
Q 041438 633 SSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKF 712 (752)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (752)
.......+||+.|||||++.+..|+.++||||+||++|||+||+.||.. ....+....+.....+... ...+
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~-----~~~~~~~~~i~~~~~~~~~---~~~s 250 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA-----GSMKNLVLKIISGSFPPVS---LHYS 250 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC-----SSHHHHHHHHHHTCCCCCC---TTSC
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-----cCHHHHHHHHHcCCCCCCC---ccCC
Confidence 2233456899999999999999999999999999999999999999962 2233344455555543221 3456
Q ss_pred HHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 713 MSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 713 ~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
+++.++|.+||++||++|||++|+++|
T Consensus 251 ~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 251 YDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 788999999999999999999999875
No 6
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=7.5e-48 Score=406.12 Aligned_cols=233 Identities=23% Similarity=0.261 Sum_probs=189.4
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------CccccCCceEEEEEeccCC
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-------------------NFCSHPRQSFIVYEYLESG 558 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------~~~~~~~~~~lV~E~~~~g 558 (752)
..+.|++.++||+|+||.||+|+. .+|+.||||+++..... +++.+.+..|+|||||+||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg 135 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGG 135 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCC
Confidence 356789999999999999999995 57999999998654322 4556778899999999999
Q ss_pred ChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCC-ceEEeecccceeccCCCCC--
Q 041438 559 SLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDSSN-- 635 (752)
Q Consensus 559 ~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~-~~kl~DfG~a~~~~~~~~~-- 635 (752)
+|.++++..+ .+++.+++.|+.||+.||+|||++ +||||||||+|||++.++ ++||+|||+|+........
T Consensus 136 ~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~ 209 (336)
T 4g3f_A 136 SLGQLIKQMG---CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209 (336)
T ss_dssp BHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc
Confidence 9999997643 489999999999999999999999 999999999999999887 6999999999987543221
Q ss_pred ---cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHHH
Q 041438 636 ---WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKF 712 (752)
Q Consensus 636 ---~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (752)
....+||+.|||||++.+..|+.++||||+||++|||+||++||.. .........+.....+... .....+
T Consensus 210 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~-----~~~~~~~~~i~~~~~~~~~-~~~~~s 283 (336)
T 4g3f_A 210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ-----YFRGPLCLKIASEPPPIRE-IPPSCA 283 (336)
T ss_dssp ----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTT-----TCCSCCHHHHHHSCCGGGG-SCTTSC
T ss_pred eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCC-----CCHHHHHHHHHcCCCCchh-cCccCC
Confidence 1235799999999999999999999999999999999999999962 2223334444443332211 123456
Q ss_pred HHHHHHHHhccCcCCCCCCCHHHHHHHHhhh
Q 041438 713 MSIMQVAFSCLDQNPVSRPTMKRFEVQSKQF 743 (752)
Q Consensus 713 ~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 743 (752)
+++.++|.+||++||++|||++|+++++.+.
T Consensus 284 ~~~~~li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 284 PLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 7899999999999999999999999998765
No 7
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.7e-48 Score=404.51 Aligned_cols=224 Identities=21% Similarity=0.334 Sum_probs=190.2
Q ss_pred hcccccceeeccCCceEEEEEE-eCCCcEEEEEccCCCCC----C-----------------------CccccCCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVKKFHSPLP----D-----------------------NFCSHPRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~----~-----------------------~~~~~~~~~~lV 551 (752)
.++|++.+.||+|+||+||+|+ ..+|+.||||++.+... . +++.+++..|+|
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 4689999999999999999999 46799999998854210 0 445677889999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
||||+||+|.+++.+.+ .+++.+++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 111 mEy~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 99999999999997643 489999999999999999999999 999999999999999999999999999998754
Q ss_pred CC--CCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhH
Q 041438 632 DS--SNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQ 709 (752)
Q Consensus 632 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (752)
.. ......+||+.|||||++.+..|+.++||||+||++|||+||+.||. .....+....+....+.+|.
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~-----~~~~~~~~~~i~~~~~~~p~---- 255 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-----AGNEGLIFAKIIKLEYDFPE---- 255 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSC-----CSSHHHHHHHHHHTCCCCCT----
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC-----CCCHHHHHHHHHcCCCCCCc----
Confidence 32 23445689999999999999999999999999999999999999995 22334455566666666653
Q ss_pred HHHHHHHHHHHhccCcCCCCCCCHHHHHH
Q 041438 710 NKFMSIMQVAFSCLDQNPVSRPTMKRFEV 738 (752)
Q Consensus 710 ~~~~~l~~li~~cl~~dP~~Rps~~evl~ 738 (752)
..++++.++|.+||++||++|||++|++.
T Consensus 256 ~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 256 KFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp TCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred ccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 35667899999999999999999998753
No 8
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.5e-47 Score=412.00 Aligned_cols=226 Identities=27% Similarity=0.339 Sum_probs=189.1
Q ss_pred cccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC------------------------CccccCCceEEEEEec
Q 041438 501 NDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD------------------------NFCSHPRQSFIVYEYL 555 (752)
Q Consensus 501 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------------------------~~~~~~~~~~lV~E~~ 555 (752)
+.|++.++||+|+||.||+|+. .+|+.||||++...... +++.+.+..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 5699999999999999999995 57999999998643322 4456678899999999
Q ss_pred cCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCCCC
Q 041438 556 ESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN 635 (752)
Q Consensus 556 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 635 (752)
+||+|.+++... .+++.+++.|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+......
T Consensus 231 ~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 303 (423)
T 4fie_A 231 EGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 303 (423)
T ss_dssp TTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC
T ss_pred CCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc
Confidence 999999999754 389999999999999999999999 9999999999999999999999999999988765555
Q ss_pred cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHHHHHH
Q 041438 636 WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKFMSI 715 (752)
Q Consensus 636 ~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 715 (752)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||.. .........+.....+.. ......++++
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~-----~~~~~~~~~i~~~~~~~~-~~~~~~s~~~ 377 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-----EPPLKAMKMIRDNLPPRL-KNLHKVSPSL 377 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT-----SCHHHHHHHHHHSCCCCC-SCTTSSCHHH
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-----cCHHHHHHHHHcCCCCCC-cccccCCHHH
Confidence 6667999999999999999999999999999999999999999852 112222333333222111 1224456789
Q ss_pred HHHHHhccCcCCCCCCCHHHHHHH
Q 041438 716 MQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 716 ~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.++|.+||+.||++|||++|+++|
T Consensus 378 ~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 378 KGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHcCCChhHCcCHHHHhcC
Confidence 999999999999999999999986
No 9
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.6e-47 Score=391.81 Aligned_cols=223 Identities=19% Similarity=0.282 Sum_probs=173.6
Q ss_pred hcccccceeeccCCceEEEEEE-eCCCcEEEEEccCCCCCC---------------------------CccccCCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVKKFHSPLPD---------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---------------------------~~~~~~~~~~lV 551 (752)
.++|++.+.||+|+||+||+|+ ..+|+.||||++++.... +++.+++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 4789999999999999999999 467999999998654321 445677889999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
|||| +|+|.+++.+.+ .+++.+++.++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+....
T Consensus 92 mEy~-~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp EECC-CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred EeCC-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 9999 579999987654 489999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCCcccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHH
Q 041438 632 DSSNWSKLAGTHGNVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQN 710 (752)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (752)
. ......+||+.|||||++.+..+ ++++||||+||++|||+||+.||.. .........+.......|. .
T Consensus 165 ~-~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~-----~~~~~~~~~i~~~~~~~p~----~ 234 (275)
T 3hyh_A 165 G-NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-----ESIPVLFKNISNGVYTLPK----F 234 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHTCCCCCT----T
T ss_pred C-CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC-----CCHHHHHHHHHcCCCCCCC----C
Confidence 3 23345689999999999998876 6899999999999999999999962 2233344555555555553 3
Q ss_pred HHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 711 KFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 711 ~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.++++.+++.+||++||++|||++|+++|
T Consensus 235 ~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 235 LSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 45678999999999999999999999986
No 10
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=7.7e-47 Score=394.67 Aligned_cols=234 Identities=22% Similarity=0.333 Sum_probs=181.7
Q ss_pred hcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC--------------------------CccccCCceEEEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIVYE 553 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV~E 553 (752)
.+++++.++||+|+||+||+|++. ..||||+++..... +++. .+..|+|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEE
Confidence 467888999999999999999864 36999998654322 3343 456899999
Q ss_pred eccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCC
Q 041438 554 YLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS 633 (752)
Q Consensus 554 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~ 633 (752)
||++|+|.+++.... ..+++.++..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+......
T Consensus 112 y~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 186 (307)
T 3omv_A 112 WCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp CCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred cCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence 999999999997543 3589999999999999999999999 99999999999999999999999999998764322
Q ss_pred --CCcccccCCCCccCcccccc---CCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCC--Ch
Q 041438 634 --SNWSKLAGTHGNVAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYP--SL 706 (752)
Q Consensus 634 --~~~~~~~gt~~y~aPE~~~~---~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 706 (752)
......+||+.|||||++.+ .+|+.++|||||||++|||+||+.||... ................| ..
T Consensus 187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~-----~~~~~~~~~~~~~~~~p~~~~ 261 (307)
T 3omv_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI-----NNRDQIIFMVGRGYASPDLSK 261 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTC-----CCHHHHHHHHHTTCCCCCSTT
T ss_pred cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCC-----ChHHHHHHHHhcCCCCCCccc
Confidence 22344689999999999864 35899999999999999999999998521 11112222222222111 11
Q ss_pred hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcC
Q 041438 707 DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYN 746 (752)
Q Consensus 707 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 746 (752)
....+++++.+++.+||+.||++|||++||+++|+.+..+
T Consensus 262 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 262 LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 2245667899999999999999999999999999988644
No 11
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=5e-47 Score=401.66 Aligned_cols=237 Identities=25% Similarity=0.402 Sum_probs=187.0
Q ss_pred cccccceeeccCCceEEEEEEeC------CCcEEEEEccCCCCCC------------------------CccccCCceEE
Q 041438 501 NDFDAKHCIGKGGHGSVYIARVP------SGEIFAVKKFHSPLPD------------------------NFCSHPRQSFI 550 (752)
Q Consensus 501 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~------------------------~~~~~~~~~~l 550 (752)
++|.+.++||+|+||.||+|++. +++.||||+++..... +++.+.+..|+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 57888999999999999999853 5789999998753221 56777888999
Q ss_pred EEEeccCCChHHHhccCcc------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCce
Q 041438 551 VYEYLESGSLDKILNNDAS------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEA 618 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~------------~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~ 618 (752)
|||||++|+|.++++.... ..+++|.++..|+.||++||+|||+. +||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcE
Confidence 9999999999999976432 23589999999999999999999999 99999999999999999999
Q ss_pred EEeecccceeccCCCC--CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHh
Q 041438 619 HVSDFRIAKFLNLDSS--NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIE 695 (752)
Q Consensus 619 kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~ 695 (752)
||+|||+|+....... .....+||+.|||||++.+..++.++|||||||++|||+| |+.||... ...+....
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~-----~~~~~~~~ 272 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL-----SNTEAIDC 272 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS-----CHHHHHHH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Confidence 9999999987643322 2234579999999999999999999999999999999999 89998521 12222333
Q ss_pred hhcc-CCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcCCCC
Q 041438 696 ILDS-RLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDH 749 (752)
Q Consensus 696 ~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 749 (752)
+... +.+.| ..+++++.+++.+||+.||++|||++||+++|+.+...|..
T Consensus 273 i~~g~~~~~p----~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp~ 323 (329)
T 4aoj_A 273 ITQGRELERP----RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPV 323 (329)
T ss_dssp HHHTCCCCCC----TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC-
T ss_pred HHcCCCCCCc----ccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCcc
Confidence 3333 23333 34567899999999999999999999999999999876653
No 12
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.3e-47 Score=399.48 Aligned_cols=224 Identities=21% Similarity=0.301 Sum_probs=186.2
Q ss_pred cccccceeeccCCceEEEEEEe----CCCcEEEEEccCCCCCC--------------------------CccccCCceEE
Q 041438 501 NDFDAKHCIGKGGHGSVYIARV----PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFI 550 (752)
Q Consensus 501 ~~y~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~l 550 (752)
++|++.+.||+|+||+||+|+. .+++.||||++++.... +++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 6799999999999999999984 25789999988643211 34566788999
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
|||||+||+|.+++.+.+ .+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+...
T Consensus 104 vmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 177 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177 (304)
T ss_dssp EECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred EEEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence 999999999999997643 489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHH
Q 041438 631 LDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQN 710 (752)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (752)
.........+||+.|||||++.+..|+.++||||+||++|||+||+.||.. ....+....+.......|. .
T Consensus 178 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~-----~~~~~~~~~i~~~~~~~p~----~ 248 (304)
T 3ubd_A 178 DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG-----KDRKETMTMILKAKLGMPQ----F 248 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHCCCCCCT----T
T ss_pred CCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCC-----cCHHHHHHHHHcCCCCCCC----c
Confidence 555555567999999999999999999999999999999999999999962 2333445556666666553 3
Q ss_pred HHHHHHHHHHhccCcCCCCCCCH-----HHHHHH
Q 041438 711 KFMSIMQVAFSCLDQNPVSRPTM-----KRFEVQ 739 (752)
Q Consensus 711 ~~~~l~~li~~cl~~dP~~Rps~-----~evl~~ 739 (752)
.++++.++|.+||++||++|||+ +|+++|
T Consensus 249 ~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 249 LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred CCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 56678999999999999999985 566654
No 13
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=4.9e-47 Score=397.93 Aligned_cols=231 Identities=19% Similarity=0.312 Sum_probs=188.2
Q ss_pred cccccceeeccCCceEEEEEEe------CCCcEEEEEccCCCCCC-------------------------CccccCCceE
Q 041438 501 NDFDAKHCIGKGGHGSVYIARV------PSGEIFAVKKFHSPLPD-------------------------NFCSHPRQSF 549 (752)
Q Consensus 501 ~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~ 549 (752)
.++++.++||+|+||+||+|++ .+++.||||+++..... +++.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 4677889999999999999985 35789999998754322 5667778899
Q ss_pred EEEEeccCCChHHHhccCcc-------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCC
Q 041438 550 IVYEYLESGSLDKILNNDAS-------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGY 616 (752)
Q Consensus 550 lV~E~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~ 616 (752)
+|||||++|+|.+++..... ...+++.++..|+.|||+||+|||++ +||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCC
Confidence 99999999999999965321 23589999999999999999999999 999999999999999999
Q ss_pred ceEEeecccceeccCCC--CCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccch
Q 041438 617 EAHVSDFRIAKFLNLDS--SNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMN 693 (752)
Q Consensus 617 ~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~ 693 (752)
.+||+|||+|+...... ......+||+.|||||++.+..|+.++|||||||++|||+| |+.||... ...+..
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~-----~~~~~~ 257 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY-----SNQDVV 257 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC-----CHHHHH
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC-----CHHHHH
Confidence 99999999998764332 22334589999999999999999999999999999999998 89998521 122233
Q ss_pred HhhhccC-CCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhh
Q 041438 694 IEILDSR-LPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQF 743 (752)
Q Consensus 694 ~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 743 (752)
..+.... .+.| ..+++++.+++.+||+.||++|||++||+++|+.+
T Consensus 258 ~~i~~~~~~~~p----~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 258 EMIRNRQVLPCP----DDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHcCCCCCCc----ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 3333332 2233 34567899999999999999999999999999875
No 14
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.1e-47 Score=399.03 Aligned_cols=233 Identities=23% Similarity=0.389 Sum_probs=189.6
Q ss_pred cccccceeeccCCceEEEEEEeC------CCcEEEEEccCCCCCC------------------------CccccCCceEE
Q 041438 501 NDFDAKHCIGKGGHGSVYIARVP------SGEIFAVKKFHSPLPD------------------------NFCSHPRQSFI 550 (752)
Q Consensus 501 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~------------------------~~~~~~~~~~l 550 (752)
++|.+.++||+|+||+||+|++. +++.||||+++..... +++.+++..|+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 57889999999999999999853 4789999998653211 56677888999
Q ss_pred EEEeccCCChHHHhccCc----------cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEE
Q 041438 551 VYEYLESGSLDKILNNDA----------SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHV 620 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~----------~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl 620 (752)
|||||++|+|.++++..+ ....++|.++..|+.||++||+|||++ +||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEE
Confidence 999999999999997643 234689999999999999999999999 9999999999999999999999
Q ss_pred eecccceeccCCCCC--cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhh
Q 041438 621 SDFRIAKFLNLDSSN--WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEIL 697 (752)
Q Consensus 621 ~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 697 (752)
+|||+|+........ .....||+.|||||++.+..|+.++|||||||++|||+| |+.||... ...+....+.
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~-----~~~~~~~~i~ 244 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL-----SNNEVIECIT 244 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHHHHHHHHH
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHH
Confidence 999999876433221 123468999999999999999999999999999999999 89998521 2223333444
Q ss_pred ccC-CCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 698 DSR-LPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 698 ~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
... .+.| ..+++++.+++.+||+.||++|||++|+.+.|+++..
T Consensus 245 ~~~~~~~p----~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 245 QGRVLQRP----RTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp HTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCCCC----ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 433 2333 3456789999999999999999999999999998753
No 15
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=6.3e-45 Score=422.46 Aligned_cols=376 Identities=25% Similarity=0.254 Sum_probs=313.3
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceee
Q 041438 84 GRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILH 163 (752)
Q Consensus 84 ~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 163 (752)
..++.++|+++.+.+. ++..|.++++|++|+|++|+|+++.|.+|+++++|++|+|++|++++..|..|+++++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKIL-KSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCCEE-CTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCcCEEECCCCCcCEe-ChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 4678899999998764 455799999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCCCCCcccCCCCCCcEEEccCCCCCC-cCCcCccCCCcceEEeeccccccccccccccCccccc----cccccc
Q 041438 164 ISRNQLNGSIPHEVGQLNFLNHLILDSNFLGG-SIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLF----DMKLCI 238 (752)
Q Consensus 164 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~l~l~~ 238 (752)
|++|.+++..+..|+++++|++|+|++|++++ .+|..|+++++|++|+|++|++++..|..|+.+++|+ .+++++
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~ 190 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL 190 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTT
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccC
Confidence 99999998888899999999999999999986 5699999999999999999999988777666555433 233333
Q ss_pred cccCCCcCC-----------------------------------------------------------------------
Q 041438 239 NQLNGAIPL----------------------------------------------------------------------- 247 (752)
Q Consensus 239 N~l~~~~~~----------------------------------------------------------------------- 247 (752)
|++++..+.
T Consensus 191 n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 270 (606)
T 3vq2_A 191 NPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTY 270 (606)
T ss_dssp CCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECC
T ss_pred CCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccc
Confidence 333211110
Q ss_pred ------------------------------------------------------------------------CCCCCCCC
Q 041438 248 ------------------------------------------------------------------------SIDWGRCP 255 (752)
Q Consensus 248 ------------------------------------------------------------------------~~~~~~l~ 255 (752)
...+..++
T Consensus 271 ~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~ 350 (606)
T 3vq2_A 271 TNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALP 350 (606)
T ss_dssp CTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCT
T ss_pred cccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCC
Confidence 01223455
Q ss_pred CCcEEEccccccCCC--CCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCC-cccCCCccccee
Q 041438 256 QLSLLDVSINNITGN--IPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIP-GELGSLINLEYL 332 (752)
Q Consensus 256 ~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L 332 (752)
+|++|++++|++++. .|..+..+++|++|++++|.+++ +|..+..+++|+.|++++|++.+..| ..+..+++|++|
T Consensus 351 ~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 429 (606)
T 3vq2_A 351 SLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYL 429 (606)
T ss_dssp TCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEE
T ss_pred CCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEE
Confidence 666666666666654 35666777777777777777764 55778888999999999999988877 688999999999
Q ss_pred eccccccccccchhhcccccccEEEcCCCcCcc-ccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcC
Q 041438 333 DLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQ-QIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNL 411 (752)
Q Consensus 333 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 411 (752)
++++|.+++..|..|..+++|++|++++|++++ .+|..|..+++|++|+|++|++++..|..+..+++|++|+|++|++
T Consensus 430 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 509 (606)
T 3vq2_A 430 DISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNL 509 (606)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred ECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcC
Confidence 999999999999999999999999999999987 4788999999999999999999999999999999999999999999
Q ss_pred CcCCchhhhccCCCcEEEccCCcccCcCCCC-cccC-CCCcccccCCCCCCCC
Q 041438 412 SGLIPRCFEELHGLLHIDISYNKLEGHIPNS-TTFR-DAPLEALQGNKGLCGD 462 (752)
Q Consensus 412 ~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~-~~~~~~~~~n~~~c~~ 462 (752)
++.+|..|..+++|+.||+++|+++. +|.. ..+. .+....+.+|++.|..
T Consensus 510 ~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~c 561 (606)
T 3vq2_A 510 LFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVACIC 561 (606)
T ss_dssp SCEEGGGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCCSS
T ss_pred CCcCHHHccCCCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEccCCCcccCC
Confidence 99999999999999999999999985 4443 2332 3556688999999863
No 16
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=9.1e-45 Score=405.97 Aligned_cols=371 Identities=23% Similarity=0.238 Sum_probs=313.6
Q ss_pred CCCcccc--eeeCCC---------CCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccc-cCCccCcCCCCCCee
Q 041438 71 SLCTWSG--IHCNHA---------GRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFD-IIPPQISNLSKLEYL 138 (752)
Q Consensus 71 ~~c~w~g--v~C~~~---------~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L 138 (752)
+.|.|.+ |.|+.. .++..++|+++.+.+. .+..|..+++|++|+|++|.+.+ +.+..|.++++|++|
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L 84 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAEL-NETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIIL 84 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEE-CTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcC-ChhHhccCccccEEECcCCcccceECcccccccccCCEE
Confidence 4577766 888642 3577888888888754 45578889999999999998874 446778999999999
Q ss_pred ecCCCcccccCCcccccccccceeeccCcccCCCCCcc--cCCCCCCcEEEccCCCCCCcCCcC-ccCCCcceEEeeccc
Q 041438 139 DFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHE--VGQLNFLNHLILDSNFLGGSIPRS-LSNFTNLVFLYLYNN 215 (752)
Q Consensus 139 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N 215 (752)
+|++|++++..|..|+++++|++|+|++|++++.+|.. |..+++|++|+|++|++++..|.. |.++++|++|+|++|
T Consensus 85 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n 164 (455)
T 3v47_A 85 KLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFN 164 (455)
T ss_dssp ECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTC
T ss_pred eCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCC
Confidence 99999998888888999999999999999998755544 888999999999999998887776 788999999999999
Q ss_pred cccccccccccCc--cccccccccccccCCCcCCCCC------CCCCCCCcEEEccccccCCCCCcccCCC---CCCCEE
Q 041438 216 SFSGSIPQQIGNL--KSLFDMKLCINQLNGAIPLSID------WGRCPQLSLLDVSINNITGNIPFEIGES---PQLQYL 284 (752)
Q Consensus 216 ~l~~~~p~~~~~l--~~L~~l~l~~N~l~~~~~~~~~------~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L 284 (752)
++++..|..+.++ .+|+.+++++|.+.+..+..+. +..+++|++|++++|++++..|..+... ++|+.|
T Consensus 165 ~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L 244 (455)
T 3v47_A 165 KVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSL 244 (455)
T ss_dssp CBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEE
T ss_pred cccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeE
Confidence 9988888888877 6788899999988876554332 2356789999999999988887766543 788999
Q ss_pred ecCCCcCcCC----------CCccccC--CcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhccccc
Q 041438 285 DLSSNYIVGE----------IPTQLGN--IIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVK 352 (752)
Q Consensus 285 ~Ls~N~l~~~----------~p~~~~~--l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 352 (752)
++++|.+.+. .+..+.. .++|+.|++++|++++.+|..|+.+++|++|+|++|++++..+..|..+++
T Consensus 245 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 324 (455)
T 3v47_A 245 ILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTH 324 (455)
T ss_dssp ECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred eeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCccc
Confidence 9998866542 1222332 268999999999999999999999999999999999999999999999999
Q ss_pred ccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCchhhhccCCCcEEEccC
Q 041438 353 LYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISY 432 (752)
Q Consensus 353 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 432 (752)
|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|++++.++..|..+++|++|++++
T Consensus 325 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 404 (455)
T 3v47_A 325 LLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHT 404 (455)
T ss_dssp CCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccC
Confidence 99999999999998899999999999999999999999999999999999999999999999888899999999999999
Q ss_pred CcccCcCCCC
Q 041438 433 NKLEGHIPNS 442 (752)
Q Consensus 433 N~l~~~~p~~ 442 (752)
|++++.+|..
T Consensus 405 N~l~~~~~~~ 414 (455)
T 3v47_A 405 NPWDCSCPRI 414 (455)
T ss_dssp SCBCCCTTTT
T ss_pred CCcccCCCcc
Confidence 9999998854
No 17
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1e-45 Score=383.31 Aligned_cols=222 Identities=19% Similarity=0.253 Sum_probs=174.9
Q ss_pred cccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------Cccc----cCCceEEE
Q 041438 503 FDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCS----HPRQSFIV 551 (752)
Q Consensus 503 y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~----~~~~~~lV 551 (752)
|++.++||+|+||.||+|+. .+++.||||++...... +++. .....|+|
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 36778899999999999994 57899999988644322 1221 23457999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCC--eeecCCCCCCEEeC-CCCceEEeeccccee
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP--IVHWDISSKNVLLD-LGYEAHVSDFRIAKF 628 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~--ivH~DlKp~NIll~-~~~~~kl~DfG~a~~ 628 (752)
||||++|+|.+++.+.. .+++..++.|+.||+.||+|||++ + ||||||||+|||++ .++.+||+|||+|+.
T Consensus 108 mEy~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~ 181 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence 99999999999997643 488999999999999999999998 7 99999999999998 478999999999986
Q ss_pred ccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhh
Q 041438 629 LNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDV 708 (752)
Q Consensus 629 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (752)
.. .......+||+.|||||++.+ +|++++|||||||++|||+||+.||... .........+..... +....
T Consensus 182 ~~--~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~----~~~~~~~~~i~~~~~--~~~~~ 252 (290)
T 3fpq_A 182 KR--ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC----QNAAQIYRRVTSGVK--PASFD 252 (290)
T ss_dssp CC--TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC----SSHHHHHHHHTTTCC--CGGGG
T ss_pred CC--CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCC----CcHHHHHHHHHcCCC--CCCCC
Confidence 43 233455689999999998865 6999999999999999999999998521 111122222322222 11122
Q ss_pred HHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 709 QNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 709 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
...++++.++|.+||++||++|||++|+++|
T Consensus 253 ~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 253 KVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 3345678999999999999999999999875
No 18
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.3e-45 Score=438.72 Aligned_cols=350 Identities=34% Similarity=0.494 Sum_probs=282.3
Q ss_pred EEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCC-CCCeeecCCCcccccCCccccc--cccccee
Q 041438 86 VFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLS-KLEYLDFLTNKLSGHIPSEISL--LTHLTIL 162 (752)
Q Consensus 86 v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~--l~~L~~L 162 (752)
+..+++.++.+.|.++...|..+++|++|+|++|++++.+|..+.+++ +|++|+|++|++++.+|..+.. +++|++|
T Consensus 320 L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L 399 (768)
T 3rgz_A 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQEL 399 (768)
T ss_dssp CCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEE
T ss_pred ccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEE
Confidence 334444445554444444455566666666666666555555555555 5666666666666555555554 6667777
Q ss_pred eccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccC
Q 041438 163 HISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLN 242 (752)
Q Consensus 163 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~ 242 (752)
+|++|++++.+|..|.++++|++|+|++|++++.+|..|.++++|++|+|++|++++.+|..+..+++|+.|++++|+++
T Consensus 400 ~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 479 (768)
T 3rgz_A 400 YLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLT 479 (768)
T ss_dssp ECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCC
T ss_pred ECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCccc
Confidence 77777777778888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcc
Q 041438 243 GAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGE 322 (752)
Q Consensus 243 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 322 (752)
+.+|.. ++.+++|++|++++|++++.+|..++.+++|++|+|++|++++.+|..++++++|+.|++++|+++|.+|..
T Consensus 480 ~~~p~~--l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~ 557 (768)
T 3rgz_A 480 GEIPSG--LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAA 557 (768)
T ss_dssp SCCCGG--GGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGG
T ss_pred CcCCHH--HhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChH
Confidence 887765 468899999999999999999999999999999999999999999999999999999999999988777654
Q ss_pred ----------------------------------------------------------------------cCCCccccee
Q 041438 323 ----------------------------------------------------------------------LGSLINLEYL 332 (752)
Q Consensus 323 ----------------------------------------------------------------------~~~l~~L~~L 332 (752)
++.+++|++|
T Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~L 637 (768)
T 3rgz_A 558 MFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFL 637 (768)
T ss_dssp GGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEE
T ss_pred HhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEE
Confidence 3346789999
Q ss_pred eccccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCC
Q 041438 333 DLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLS 412 (752)
Q Consensus 333 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 412 (752)
||++|++++.+|..|+++++|+.|+|++|+++|.+|..++++++|+.|||++|+++|.+|..+..+++|++|+|++|+++
T Consensus 638 dLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~ 717 (768)
T 3rgz_A 638 DMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717 (768)
T ss_dssp ECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEE
T ss_pred ECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCchhhhccCCCcEEEccCCc-ccCc
Q 041438 413 GLIPRCFEELHGLLHIDISYNK-LEGH 438 (752)
Q Consensus 413 ~~~p~~~~~l~~L~~L~ls~N~-l~~~ 438 (752)
|.+|.. ..+..+....+.+|+ +.|.
T Consensus 718 g~iP~~-~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 718 GPIPEM-GQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp EECCSS-SSGGGSCGGGGCSCTEEEST
T ss_pred ccCCCc-hhhccCCHHHhcCCchhcCC
Confidence 999964 223334444566675 5553
No 19
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.5e-45 Score=387.55 Aligned_cols=243 Identities=23% Similarity=0.285 Sum_probs=183.1
Q ss_pred cccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-----------------------CccccC----CceEEEEE
Q 041438 501 NDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-----------------------NFCSHP----RQSFIVYE 553 (752)
Q Consensus 501 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------------~~~~~~----~~~~lV~E 553 (752)
.+|.+.++||+|+||+||+|++ +|+.||||+++..... +++.++ ...|+|||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 4688899999999999999987 6899999988643211 223222 25799999
Q ss_pred eccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCC-----CCCeeecCCCCCCEEeCCCCceEEeeccccee
Q 041438 554 YLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNC-----FPPIVHWDISSKNVLLDLGYEAHVSDFRIAKF 628 (752)
Q Consensus 554 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-----~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~ 628 (752)
||++|+|.++++.. .++++.+.+++.|+++||+|||+++ .++||||||||+|||++.++++||+|||+|+.
T Consensus 82 y~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp CCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred CCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 99999999999754 3899999999999999999999762 45899999999999999999999999999988
Q ss_pred ccCCCCC----cccccCCCCccCccccccC------CCCCccchhhHHHHHHHHHhCCCCcchhhcccc----------c
Q 041438 629 LNLDSSN----WSKLAGTHGNVAPELAYTM------KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS----------S 688 (752)
Q Consensus 629 ~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~----------~ 688 (752)
....... ....+||+.|||||++.+. .++.|+|||||||++|||+||.+||........ .
T Consensus 158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3hmm_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence 7543322 2235799999999998764 367899999999999999999888642211110 0
Q ss_pred cccchHhhhccCC--CCCCh-hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcCCC
Q 041438 689 SSNMNIEILDSRL--PYPSL-DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPD 748 (752)
Q Consensus 689 ~~~~~~~~~~~~~--~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 748 (752)
.......+..... ..|.. ...+.++.+.+++.+||+.||++||||+||++.|+++....+
T Consensus 238 ~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~ 300 (303)
T 3hmm_A 238 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp HHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcC
Confidence 0111222222222 22221 123456788999999999999999999999999999876543
No 20
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.1e-45 Score=394.53 Aligned_cols=238 Identities=20% Similarity=0.296 Sum_probs=189.8
Q ss_pred HHHhhcccccceeeccCCceEEEEEEeC------CCcEEEEEccCCCCCC--------------------------Cccc
Q 041438 496 IIRATNDFDAKHCIGKGGHGSVYIARVP------SGEIFAVKKFHSPLPD--------------------------NFCS 543 (752)
Q Consensus 496 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~--------------------------~~~~ 543 (752)
+....++|++.+.||+|+||.||+|+.. .++.||||+++..... ++|.
T Consensus 59 wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~ 138 (353)
T 4ase_A 59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 138 (353)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE
Confidence 3344578999999999999999999843 2468999988653221 3343
Q ss_pred c-CCceEEEEEeccCCChHHHhccCcc-------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCC
Q 041438 544 H-PRQSFIVYEYLESGSLDKILNNDAS-------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609 (752)
Q Consensus 544 ~-~~~~~lV~E~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~N 609 (752)
+ ....|+|||||++|+|.++++.... ...+++.++..|+.|||+||+|||++ +||||||||+|
T Consensus 139 ~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~N 215 (353)
T 4ase_A 139 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARN 215 (353)
T ss_dssp CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccc
Confidence 3 4568999999999999999975432 23489999999999999999999999 99999999999
Q ss_pred EEeCCCCceEEeecccceeccCCCCC--cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccc
Q 041438 610 VLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMS 686 (752)
Q Consensus 610 Ill~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~ 686 (752)
||+++++.+||+|||+|+........ ....+||+.|||||++.+..|+.++|||||||++|||+| |+.||...
T Consensus 216 ILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~---- 291 (353)
T 4ase_A 216 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV---- 291 (353)
T ss_dssp EEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC----
T ss_pred eeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC----
Confidence 99999999999999999976544322 234579999999999999999999999999999999998 99998521
Q ss_pred cccccchHhhhcc-CCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 687 SSSSNMNIEILDS-RLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 687 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
.........+... +.+.| ..+++++.+++.+||+.||++|||++|++++|+++.
T Consensus 292 ~~~~~~~~~i~~g~~~~~p----~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll 346 (353)
T 4ase_A 292 KIDEEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346 (353)
T ss_dssp CCSHHHHHHHHHTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCCCCC----ccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 1112222222222 23333 335667899999999999999999999999998874
No 21
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=5.5e-45 Score=381.38 Aligned_cols=227 Identities=21% Similarity=0.382 Sum_probs=170.4
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------------Ccccc---------
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-------------------------NFCSH--------- 544 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~--------- 544 (752)
.++|++.+.||+|+||+||+|+. .+|+.||||+++..... +++.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 46799999999999999999994 57999999988643221 11111
Q ss_pred ---CCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEe
Q 041438 545 ---PRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVS 621 (752)
Q Consensus 545 ---~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~ 621 (752)
....|+|||||++|+|.+++.........++..++.|+.||++||+|||++ +|+||||||+|||++.++.+||+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 124689999999999999998766555567778899999999999999999 99999999999999999999999
Q ss_pred ecccceeccCCCCC------------cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhcccccc
Q 041438 622 DFRIAKFLNLDSSN------------WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS 689 (752)
Q Consensus 622 DfG~a~~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~ 689 (752)
|||+|+........ .+..+||+.|||||++.+..|+.++||||+||++|||++ ||....+ .
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~----~ 233 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME----R 233 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH----H
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH----H
Confidence 99999876543211 223579999999999999999999999999999999996 7642110 0
Q ss_pred ccchHhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 690 SNMNIEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
......+.. ...|. .....++.+.++|.+||++||++|||+.|+++|
T Consensus 234 ~~~~~~~~~--~~~p~-~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 234 VRTLTDVRN--LKFPP-LFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHHHHHT--TCCCH-HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhc--CCCCC-CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111222222 22332 234556677899999999999999999999975
No 22
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.4e-44 Score=379.56 Aligned_cols=292 Identities=28% Similarity=0.486 Sum_probs=220.7
Q ss_pred CCCHHHHHHHHHHHHccccCCccccCCCCccccCCCCCCCCc--ccceeeCCC---CCEEEEEcCCCCCcc--ccccccc
Q 041438 33 SNSTEEAHALVKWKASLEVHSRSLLHSWSLSFVNATKISLCT--WSGIHCNHA---GRVFGINLTSISLNG--TLLEFSF 105 (752)
Q Consensus 33 ~~~~~~~~aLl~fk~~~~~~~~~~l~sW~~~~~~~~~~~~c~--w~gv~C~~~---~~v~~l~l~~~~l~g--~l~~~~f 105 (752)
.|.++|++||++||+++. +|. .+++|.. +.+||. |.||+|+.. ++|+.++|+++.+.| .++ ..|
T Consensus 2 ~c~~~~~~aL~~~k~~~~-~~~-~l~~W~~------~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~-~~l 72 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG-NPT-TLSSWLP------TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIP-SSL 72 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CCG-GGTTCCT------TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECC-GGG
T ss_pred CCCHHHHHHHHHHHHhcC-Ccc-cccCCCC------CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccC-hhH
Confidence 578999999999999995 454 7899962 247898 999999854 789999999999888 554 478
Q ss_pred CCCCCCCEEECCC-CcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCc
Q 041438 106 SSFPHLAYLDLYN-NELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLN 184 (752)
Q Consensus 106 ~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 184 (752)
..+++|++|+|++ |++.+.+|..|+++++|++|+|++|++++.+|..|.++++|++|+|++|.|++.+|..|..+++|+
T Consensus 73 ~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 152 (313)
T 1ogq_A 73 ANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLV 152 (313)
T ss_dssp GGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCC
T ss_pred hCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCC
Confidence 8899999999994 888888898999999999999999999888888899999999999999999988888899999999
Q ss_pred EEEccCCCCCCcCCcCccCCC-cceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEcc
Q 041438 185 HLILDSNFLGGSIPRSLSNFT-NLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVS 263 (752)
Q Consensus 185 ~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls 263 (752)
+|+|++|++++.+|..+.+++ +|++|+|++|++++.+|..|..++ |+ .|+++
T Consensus 153 ~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~--------------------------~L~Ls 205 (313)
T 1ogq_A 153 GITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LA--------------------------FVDLS 205 (313)
T ss_dssp EEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CS--------------------------EEECC
T ss_pred eEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-cc--------------------------EEECc
Confidence 999999999888888888887 889999999999888888777654 55 55555
Q ss_pred ccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeecccccccccc
Q 041438 264 INNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFV 343 (752)
Q Consensus 264 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 343 (752)
+|++++..|..+..+++|++|+|++|.+++.+|. +..+++|++|+|++|++++.+|..+..+++|++|+|++|++++.+
T Consensus 206 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~i 284 (313)
T 1ogq_A 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284 (313)
T ss_dssp SSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEEC
T ss_pred CCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccC
Confidence 5555555555555555555555555555544443 455555555555555555555555555555566666666555555
Q ss_pred chhhcccccccEEEcCCCc
Q 041438 344 LESLGSLVKLYYLNLSHNK 362 (752)
Q Consensus 344 ~~~~~~l~~L~~L~Ls~N~ 362 (752)
|.. ..+++|+.|++++|+
T Consensus 285 p~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 285 PQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp CCS-TTGGGSCGGGTCSSS
T ss_pred CCC-ccccccChHHhcCCC
Confidence 543 555556666666665
No 23
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-43 Score=423.26 Aligned_cols=383 Identities=22% Similarity=0.220 Sum_probs=241.5
Q ss_pred CcccceeeCCCCCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCccc-ccCCccCcCCCCCCeeecCCCcccccCCc
Q 041438 73 CTWSGIHCNHAGRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELF-DIIPPQISNLSKLEYLDFLTNKLSGHIPS 151 (752)
Q Consensus 73 c~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 151 (752)
|.|..|-+ ....+..++|+.+.+.+. .+.+|..+++|++|+|++|.+. .+.|.+|+++++|++|+|++|+|++..|.
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i-~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTV-TASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEE-CSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCcc-ChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 56777776 557788889988887653 4457888888888888888554 34477888888888888888888888888
Q ss_pred ccccccccceeeccCcccCCCCCcc--cCCCCCCcEEEccCCCCCCcCC-cCccCCCcceEEeeccccccccccccccCc
Q 041438 152 EISLLTHLTILHISRNQLNGSIPHE--VGQLNFLNHLILDSNFLGGSIP-RSLSNFTNLVFLYLYNNSFSGSIPQQIGNL 228 (752)
Q Consensus 152 ~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 228 (752)
.|.++++|++|+|++|.+++.+|.. |+++++|++|+|++|++++..+ ..|+++++|++|+|++|.+++..|..+..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 8888888888888888888766655 8888888888888888887655 568888888888888888887777766655
Q ss_pred --cccccccccccccCCCcCCC------------------------------CC--------------------------
Q 041438 229 --KSLFDMKLCINQLNGAIPLS------------------------------ID-------------------------- 250 (752)
Q Consensus 229 --~~L~~l~l~~N~l~~~~~~~------------------------------~~-------------------------- 250 (752)
++|+.|+++.|.+.+..|.. +.
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~ 251 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSS
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccc
Confidence 44444444444443322211 00
Q ss_pred --------CCC--CCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCC
Q 041438 251 --------WGR--CPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIP 320 (752)
Q Consensus 251 --------~~~--l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 320 (752)
|.. .++|+.|++++|.+++..|..|..+++|+.|+|++|.+++..|..|.++++|+.|+|++|++++..|
T Consensus 252 l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 331 (844)
T 3j0a_A 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYS 331 (844)
T ss_dssp STTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCS
T ss_pred cCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCH
Confidence 000 1345555555555555555555555555555555555555555555555555555555555555555
Q ss_pred cccCCCcccceeeccccccccccchhhcccccccEEEcCCCcCcc-----------------------------------
Q 041438 321 GELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQ----------------------------------- 365 (752)
Q Consensus 321 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~----------------------------------- 365 (752)
..|.++++|++|+|++|.++++.+..|..+++|++|+|++|.+++
T Consensus 332 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N 411 (844)
T 3j0a_A 332 SNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSEN 411 (844)
T ss_dssp CSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSC
T ss_pred HHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccC
Confidence 555555555555555555555444444444444444444444332
Q ss_pred -----------------------------cc------------------------------chhccccccCCeeecCCcc
Q 041438 366 -----------------------------QI------------------------------PIELDNLIHLSELDLSHNF 386 (752)
Q Consensus 366 -----------------------------~~------------------------------p~~~~~l~~L~~L~Ls~N~ 386 (752)
.. +..|.++++|++|+|++|.
T Consensus 412 ~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~ 491 (844)
T 3j0a_A 412 RLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNY 491 (844)
T ss_dssp CCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHH
T ss_pred ccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCc
Confidence 11 1223444555555555555
Q ss_pred CCCCCCcccccccccceEEccCCcCCcCCchhhhccCCCcEEEccCCcccCcCCCCcccCCCCcccccCCCCCCC
Q 041438 387 LGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPNSTTFRDAPLEALQGNKGLCG 461 (752)
Q Consensus 387 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~ 461 (752)
+++.+|..|..+++|+.|+|++|+|++++|..+. ++|+.|||++|++++.+|.. +..+....+.+||+.|.
T Consensus 492 l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 492 LNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICE 562 (844)
T ss_dssp HTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCS
T ss_pred ccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCcccc
Confidence 5555555555555666666666666555554444 55666666666666655543 44566677889999985
No 24
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=9.9e-43 Score=403.98 Aligned_cols=356 Identities=21% Similarity=0.187 Sum_probs=255.1
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceee
Q 041438 84 GRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILH 163 (752)
Q Consensus 84 ~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 163 (752)
..++.++|+++.+.+. .+.+|..+++|++|+|++|+++++.|.+|+++++|++|+|++|++++..|..|+++++|++|+
T Consensus 33 ~~l~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 111 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTI-QNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLF 111 (606)
T ss_dssp TTCCEEECTTCCCSEE-CTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEE
T ss_pred CcCcEEEccCCccCcC-ChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEee
Confidence 3678899999999854 466899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccc--ccccccccc
Q 041438 164 ISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLF--DMKLCINQL 241 (752)
Q Consensus 164 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~--~l~l~~N~l 241 (752)
|++|+|++..|..|+++++|++|+|++|++++..+..+.++++|++|+|++|++++..|..|+++++|+ .|++++|++
T Consensus 112 L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l 191 (606)
T 3t6q_A 112 FIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI 191 (606)
T ss_dssp CTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCC
T ss_pred ccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCcc
Confidence 999999988888999999999999999999986655666699999999999999998899999999998 789999998
Q ss_pred CCCcCCCCCCC-----------------------------------------------CC--CCCcEEEccccccCCCCC
Q 041438 242 NGAIPLSIDWG-----------------------------------------------RC--PQLSLLDVSINNITGNIP 272 (752)
Q Consensus 242 ~~~~~~~~~~~-----------------------------------------------~l--~~L~~L~Ls~N~l~~~~p 272 (752)
++..|..+... .+ .+|+.|++++|.+++..+
T Consensus 192 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~ 271 (606)
T 3t6q_A 192 AGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISS 271 (606)
T ss_dssp CEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCT
T ss_pred CccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCH
Confidence 87666443110 00 045555666666665555
Q ss_pred cccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeecccccccccc-chhhcccc
Q 041438 273 FEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFV-LESLGSLV 351 (752)
Q Consensus 273 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~ 351 (752)
..|..+++|++|++++|.++ .+|..+.++++|++|++++|++++..|..+..+++|++|++++|.+.+.. +..+..++
T Consensus 272 ~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 272 NTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE 350 (606)
T ss_dssp TTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT
T ss_pred HHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccC
Confidence 55666666666666666665 45555566666666666666666555555555566666666666555322 33355555
Q ss_pred cccEEEcCCCcCcccc--chhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCch-hhhccCCCcEE
Q 041438 352 KLYYLNLSHNKLSQQI--PIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPR-CFEELHGLLHI 428 (752)
Q Consensus 352 ~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L 428 (752)
+|++|++++|++++.. +..+..+++|++|++++|.+.+..|..|..+++|++|++++|++++..|. .+..+++|+.|
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 430 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVL 430 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEE
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEE
Confidence 5566666655555444 44555555555555555555555555555555555555555555554433 25555555555
Q ss_pred EccCCcccCcCCC
Q 041438 429 DISYNKLEGHIPN 441 (752)
Q Consensus 429 ~ls~N~l~~~~p~ 441 (752)
++++|.+++..|.
T Consensus 431 ~l~~n~l~~~~~~ 443 (606)
T 3t6q_A 431 NLSHSLLDISSEQ 443 (606)
T ss_dssp ECTTCCCBTTCTT
T ss_pred ECCCCccCCcCHH
Confidence 5555555554443
No 25
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.9e-42 Score=401.68 Aligned_cols=294 Identities=20% Similarity=0.188 Sum_probs=236.0
Q ss_pred cCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCC
Q 041438 165 SRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGA 244 (752)
Q Consensus 165 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 244 (752)
++|.+++..+..|+.+++|++|+|++|+++ .+|..+.++++|++|+|++|++++..|..+.++++|+.|++++|.+.+.
T Consensus 262 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~ 340 (606)
T 3t6q_A 262 QKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLE 340 (606)
T ss_dssp TTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCB
T ss_pred ecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccc
Confidence 333333333444566667777777777776 4566677777777777777777776677777777777777777777765
Q ss_pred cCCCCCCCCCCCCcEEEccccccCCCC--CcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCc-
Q 041438 245 IPLSIDWGRCPQLSLLDVSINNITGNI--PFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPG- 321 (752)
Q Consensus 245 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~- 321 (752)
+|.. .+..+++|++|++++|.+++.. +..+..+++|++|++++|.+.+..|..|.++++|+.|++++|++++..|.
T Consensus 341 ~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 419 (606)
T 3t6q_A 341 LGTG-CLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQS 419 (606)
T ss_dssp CCSS-TTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCC
T ss_pred cchh-hhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccch
Confidence 5543 2567888999999999888766 77888889999999999999888888899999999999999999877654
Q ss_pred ccCCCcccceeeccccccccccchhhcccccccEEEcCCCcCccc---cchhccccccCCeeecCCccCCCCCCcccccc
Q 041438 322 ELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQ---IPIELDNLIHLSELDLSHNFLGEKISSRICRM 398 (752)
Q Consensus 322 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 398 (752)
.+..+++|++|++++|.+++..+..|..+++|++|++++|++++. .+..+..+++|++|+|++|++++..|..|..+
T Consensus 420 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 499 (606)
T 3t6q_A 420 PFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSL 499 (606)
T ss_dssp TTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred hhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccc
Confidence 488899999999999999988888899999999999999999763 33668889999999999999999889999999
Q ss_pred cccceEEccCCcCCcCCchhhhccCCCcEEEccCCcccCcCCCC-cccCCCCcccccCCCCCCC
Q 041438 399 ESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPNS-TTFRDAPLEALQGNKGLCG 461 (752)
Q Consensus 399 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~ 461 (752)
++|+.|+|++|++++.+|..|..++.| +|++++|++++.+|.. ..+..+....+.+|++.|.
T Consensus 500 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 500 KMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp TTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred cCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCcccc
Confidence 999999999999999999999999999 9999999999877753 3345566678899999885
No 26
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=5.9e-42 Score=402.92 Aligned_cols=143 Identities=28% Similarity=0.307 Sum_probs=98.7
Q ss_pred CcccCCCcccceeeccccccccccchhhcccccccEEEcCCCcCccccc--------hhccccccCCeeecCCccCCCCC
Q 041438 320 PGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIP--------IELDNLIHLSELDLSHNFLGEKI 391 (752)
Q Consensus 320 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~ 391 (752)
|..|..+++|++|+|++|+++++++..|.++++|++|+|++|++++..+ ..|.++++|++|+|++|+++...
T Consensus 473 p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~ 552 (680)
T 1ziw_A 473 PSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIP 552 (680)
T ss_dssp SCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCC
T ss_pred CcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCC
Confidence 3445555566666666666666666666666666666666666654321 22566677777777777777665
Q ss_pred CcccccccccceEEccCCcCCcCCchhhhccCCCcEEEccCCcccCcCCCCc--ccCCCCcccccCCCCCCCC
Q 041438 392 SSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPNST--TFRDAPLEALQGNKGLCGD 462 (752)
Q Consensus 392 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~--~~~~~~~~~~~~n~~~c~~ 462 (752)
+..|.++++|+.|+|++|+++++++..|..+++|+.|++++|++++..|... .+..+....+.+||+.|..
T Consensus 553 ~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 553 VEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTC 625 (680)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCC
T ss_pred HHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCC
Confidence 6667778888888888888887777777788888888888888877665432 3556667788999999863
No 27
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.8e-42 Score=396.89 Aligned_cols=382 Identities=19% Similarity=0.165 Sum_probs=269.9
Q ss_pred CCcccceeeCCC------------CCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeee
Q 041438 72 LCTWSGIHCNHA------------GRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLD 139 (752)
Q Consensus 72 ~c~w~gv~C~~~------------~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 139 (752)
.|.|.|+ |+.. ..++.++|+++.+.+.. +..|..+++|++|+|++|+|+++.|.+|+++++|++|+
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 80 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIG-HGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLD 80 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEEC-SSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccC-hhhhhcCCcccEEECCCCCcCccChhhccccccCCEEE
Confidence 4899998 8522 26788999999887643 45799999999999999999999999999999999999
Q ss_pred cCCCcccccCCcccccccccceeeccCcccCCC-CCcccCCCCCCcEEEccCCCC-CCcCCcCccCCCcceEEeeccccc
Q 041438 140 FLTNKLSGHIPSEISLLTHLTILHISRNQLNGS-IPHEVGQLNFLNHLILDSNFL-GGSIPRSLSNFTNLVFLYLYNNSF 217 (752)
Q Consensus 140 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l-~~~~p~~~~~l~~L~~L~L~~N~l 217 (752)
|++|++++..|..|+++++|++|+|++|.+++. .|..|+++++|++|+|++|++ +...+..|.++++|++|+|++|++
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 999999998888899999999999999999973 678899999999999999984 544457899999999999999999
Q ss_pred cccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCC--------------------------
Q 041438 218 SGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNI-------------------------- 271 (752)
Q Consensus 218 ~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-------------------------- 271 (752)
++..|..++++++|+.|+++.|.+... |.. .++.+++|++|++++|++++..
T Consensus 161 ~~~~~~~l~~l~~L~~L~l~~n~~~~~-~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 238 (549)
T 2z81_A 161 RNYQSQSLKSIRDIHHLTLHLSESAFL-LEI-FADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDE 238 (549)
T ss_dssp CEECTTTTTTCSEEEEEEEECSBSTTH-HHH-HHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHH
T ss_pred cccChhhhhccccCceEecccCccccc-chh-hHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchh
Confidence 998888887766555555554443221 100 0112333444444444333310
Q ss_pred -Cc-------------------------------------c--------------------------cCCCCCCCEEecC
Q 041438 272 -PF-------------------------------------E--------------------------IGESPQLQYLDLS 287 (752)
Q Consensus 272 -p~-------------------------------------~--------------------------~~~l~~L~~L~Ls 287 (752)
+. . +...++|+.|+++
T Consensus 239 ~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~ 318 (549)
T 2z81_A 239 SFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVE 318 (549)
T ss_dssp HHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEE
T ss_pred HHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEec
Confidence 00 0 0011345555555
Q ss_pred CCcCcCCCCccc-cCCcccCEEEccCCcCcccCC---cccCCCcccceeeccccccccccc--hhhcccccccEEEcCCC
Q 041438 288 SNYIVGEIPTQL-GNIIYLNRISLSGNKLSGRIP---GELGSLINLEYLDLSANHLSNFVL--ESLGSLVKLYYLNLSHN 361 (752)
Q Consensus 288 ~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~~--~~~~~l~~L~~L~Ls~N 361 (752)
+|.+. .+|..+ .++++|+.|++++|++++.+| ..++.+++|++|+|++|++++..+ ..+..+++|++|+|++|
T Consensus 319 ~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N 397 (549)
T 2z81_A 319 NSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRN 397 (549)
T ss_dssp SSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTC
T ss_pred cCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCC
Confidence 55554 344333 456777777777777776543 336667777777777777776543 45677777777777777
Q ss_pred cCccccchhccccccCCeeecCCccCCCCCCc-----------------ccccccccceEEccCCcCCcCCchhhhccCC
Q 041438 362 KLSQQIPIELDNLIHLSELDLSHNFLGEKISS-----------------RICRMESLEKLNLSYNNLSGLIPRCFEELHG 424 (752)
Q Consensus 362 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-----------------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 424 (752)
+++ .+|..+..+++|++|+|++|.+++.... .+..+++|++|+|++|+|+.+ |. ...+++
T Consensus 398 ~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~~i-p~-~~~l~~ 474 (549)
T 2z81_A 398 TFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTL-PD-ASLFPV 474 (549)
T ss_dssp CCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCSSC-CC-GGGCTT
T ss_pred CCc-cCChhhcccccccEEECCCCCcccccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccCcC-CC-cccCcc
Confidence 776 4566666666666666666666543221 113577888888888888854 44 456888
Q ss_pred CcEEEccCCcccCcCCC-CcccCCCCcccccCCCCCCC
Q 041438 425 LLHIDISYNKLEGHIPN-STTFRDAPLEALQGNKGLCG 461 (752)
Q Consensus 425 L~~L~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~~~c~ 461 (752)
|+.||+++|++++.+|. ...+..+....+.+|++.|.
T Consensus 475 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 475 LLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp CCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred CCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 88888888888887775 34455666677888888875
No 28
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.4e-42 Score=401.59 Aligned_cols=344 Identities=20% Similarity=0.252 Sum_probs=308.0
Q ss_pred CCEEEEEcCCCCCccc-----------------ccccccC--CCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCc
Q 041438 84 GRVFGINLTSISLNGT-----------------LLEFSFS--SFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNK 144 (752)
Q Consensus 84 ~~v~~l~l~~~~l~g~-----------------l~~~~f~--~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 144 (752)
.....++|+++.+.|. ++ ..++ .+++|++|+|++|++.+.+|..|+++++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip-~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKT-EDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT-SCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCc-hhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 4677899999999995 43 4666 99999999999999999999999999999999999998
Q ss_pred -ccc-cCCcccccc------cccceeeccCcccCCCCCc--ccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeecc
Q 041438 145 -LSG-HIPSEISLL------THLTILHISRNQLNGSIPH--EVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYN 214 (752)
Q Consensus 145 -l~~-~~p~~~~~l------~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 214 (752)
++| .+|..++.+ ++|++|+|++|+++ .+|. .|+++++|++|+|++|+++|.+| .|.++++|++|+|++
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~ 362 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAY 362 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCC
Confidence 999 899999887 99999999999999 8898 99999999999999999999999 999999999999999
Q ss_pred ccccccccccccCccc-cccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccC-------CCCCCCEEec
Q 041438 215 NSFSGSIPQQIGNLKS-LFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIG-------ESPQLQYLDL 286 (752)
Q Consensus 215 N~l~~~~p~~~~~l~~-L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-------~l~~L~~L~L 286 (752)
|+++ .+|..+.++++ |+.|++++|+++ .+|..+....+++|+.|++++|++++.+|..+. .+++|++|+|
T Consensus 363 N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~L 440 (636)
T 4eco_A 363 NQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINL 440 (636)
T ss_dssp SEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEEC
T ss_pred Cccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEEC
Confidence 9999 88889999999 999999999999 677655444456999999999999999999888 8889999999
Q ss_pred CCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCC-------cccceeeccccccccccchhhc--ccccccEEE
Q 041438 287 SSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSL-------INLEYLDLSANHLSNFVLESLG--SLVKLYYLN 357 (752)
Q Consensus 287 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-------~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~ 357 (752)
++|.+++..+..+..+++|+.|+|++|+++...+..+... ++|++|+|++|+++. +|..+. .+++|+.|+
T Consensus 441 s~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~~~l~~L~~L~ 519 (636)
T 4eco_A 441 SNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYLVGID 519 (636)
T ss_dssp CSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCCB-CCGGGSTTTCTTCCEEE
T ss_pred cCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCCc-cChhhhhccCCCcCEEE
Confidence 9999996555566779999999999999995444444433 399999999999996 455665 999999999
Q ss_pred cCCCcCccccchhccccccCCeeec------CCccCCCCCCcccccccccceEEccCCcCCcCCchhhhccCCCcEEEcc
Q 041438 358 LSHNKLSQQIPIELDNLIHLSELDL------SHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDIS 431 (752)
Q Consensus 358 Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls 431 (752)
|++|++++ +|..+..+++|++|+| ++|++.+.+|..+..+++|+.|+|++|++ +.+|..+. ++|+.||++
T Consensus 520 Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls 595 (636)
T 4eco_A 520 LSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIK 595 (636)
T ss_dssp CCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECC
T ss_pred CCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECc
Confidence 99999998 8999999999999999 56889999999999999999999999999 55677665 799999999
Q ss_pred CCcccC
Q 041438 432 YNKLEG 437 (752)
Q Consensus 432 ~N~l~~ 437 (752)
+|++..
T Consensus 596 ~N~l~~ 601 (636)
T 4eco_A 596 DNPNIS 601 (636)
T ss_dssp SCTTCE
T ss_pred CCCCcc
Confidence 998874
No 29
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.4e-43 Score=380.22 Aligned_cols=233 Identities=19% Similarity=0.261 Sum_probs=177.3
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------Cc------cccCC
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NF------CSHPR 546 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~------~~~~~ 546 (752)
.++|++.+.||+|+||.||+|+. .+|+.||||+++..... ++ +.+.+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 36799999999999999999994 67999999998654322 11 22346
Q ss_pred ceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccc
Q 041438 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIA 626 (752)
Q Consensus 547 ~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a 626 (752)
..|+|||||+ |+|.+++...+ .+++.+++.|++||+.||+|||++ |||||||||+|||++.++.+||+|||+|
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~---~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEeCCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 7899999996 58999997643 489999999999999999999999 9999999999999999999999999999
Q ss_pred eeccCC----CCCcccccCCCCccCccccccCC-CCCccchhhHHHHHHHHHhCCCCcchhhcccc----------cc--
Q 041438 627 KFLNLD----SSNWSKLAGTHGNVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS----------SS-- 689 (752)
Q Consensus 627 ~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDIwSlGvil~elltg~~pf~~~~~~~~----------~~-- 689 (752)
+.+... .......+||+.|||||++.+.. ++.++||||+||++|||++|++||........ ..
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 285 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGG
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence 876432 22334569999999999988754 69999999999999999999999953211000 00
Q ss_pred ------ccchHhhhccCCCCCChhh----HHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 690 ------SNMNIEILDSRLPYPSLDV----QNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 690 ------~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
................... ...++++.+||.+||+.||++|||++|+++|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000111111111111111 1235678999999999999999999999976
No 30
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3e-42 Score=385.54 Aligned_cols=354 Identities=21% Similarity=0.246 Sum_probs=314.0
Q ss_pred CCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccC-CcccccccccceeeccCcccCCCCCcccCCCCCCcEEE
Q 041438 109 PHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHI-PSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLI 187 (752)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 187 (752)
++|++|+|++|+|+++.|..|+++++|++|+|++|.+.+.+ +..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 78999999999999999999999999999999999998544 67899999999999999999999999999999999999
Q ss_pred ccCCCCCCcCCcC--ccCCCcceEEeecccccccccccc-ccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccc
Q 041438 188 LDSNFLGGSIPRS--LSNFTNLVFLYLYNNSFSGSIPQQ-IGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSI 264 (752)
Q Consensus 188 L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~ 264 (752)
|++|++++..|.. |.++++|++|+|++|++++..|.. +.++++|++|++++|++++..+..+.--..++|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999999855554 999999999999999999988876 8999999999999999999887665333347899999999
Q ss_pred cccCCCCCccc--------CCCCCCCEEecCCCcCcCCCCccccCC---cccCEEEccCCcCcccC----------Cccc
Q 041438 265 NNITGNIPFEI--------GESPQLQYLDLSSNYIVGEIPTQLGNI---IYLNRISLSGNKLSGRI----------PGEL 323 (752)
Q Consensus 265 N~l~~~~p~~~--------~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~----------p~~~ 323 (752)
|.+++..+..+ ..+++|++|++++|.+++..|..+... .+|+.|++++|.+.+.. +..+
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 99998766543 367899999999999999888877655 89999999999765432 2223
Q ss_pred CC--CcccceeeccccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCccccccccc
Q 041438 324 GS--LINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESL 401 (752)
Q Consensus 324 ~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 401 (752)
.. .++|++|++++|.+++..+..|+.+++|++|+|++|++++..|..|.++++|++|+|++|.+++..+..|..+++|
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL 349 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC
Confidence 22 2689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEccCCcCCcCCchhhhccCCCcEEEccCCcccCcCCCC-cccCCCCcccccCCCCCCCC
Q 041438 402 EKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPNS-TTFRDAPLEALQGNKGLCGD 462 (752)
Q Consensus 402 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~~ 462 (752)
++|+|++|++++..|..|..+++|++|++++|++++..+.. ..+..+....+.+|+..|..
T Consensus 350 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 411 (455)
T 3v47_A 350 EVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 411 (455)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCC
Confidence 99999999999999999999999999999999999866643 34566777789999998863
No 31
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.6e-42 Score=395.30 Aligned_cols=376 Identities=23% Similarity=0.238 Sum_probs=309.2
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceee
Q 041438 84 GRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILH 163 (752)
Q Consensus 84 ~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 163 (752)
..+..++++++.+.+. .+.+|..+++|++|+|++|+++++.|.+|+++++|++|+|++|++++..|..|.++++|++|+
T Consensus 28 ~~l~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHL-GSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SSCCEEECCSCCCCEE-CTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred ccccEEEccCCccCcc-ChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 3577889998888753 455789999999999999999998889999999999999999999988889999999999999
Q ss_pred ccCcccCCCCCcccCCCCCCcEEEccCCCCCC-cCCcCccCCCcceEEeeccccccccccccccCcccc----ccccccc
Q 041438 164 ISRNQLNGSIPHEVGQLNFLNHLILDSNFLGG-SIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSL----FDMKLCI 238 (752)
Q Consensus 164 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L----~~l~l~~ 238 (752)
|++|++++..+..|+++++|++|+|++|++++ .+|..|+++++|++|++++|++++..|..++.+++| ..+++++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 99999997777789999999999999999987 468899999999999999999988877777777777 6667776
Q ss_pred cccCCCcCCCC---------------------------------------------------------------------
Q 041438 239 NQLNGAIPLSI--------------------------------------------------------------------- 249 (752)
Q Consensus 239 N~l~~~~~~~~--------------------------------------------------------------------- 249 (752)
|.+++..|..+
T Consensus 187 n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 187 NPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 66554333211
Q ss_pred ----------CCCCCCCCcEEEccccccCCCCCccc------------------------------------------CC
Q 041438 250 ----------DWGRCPQLSLLDVSINNITGNIPFEI------------------------------------------GE 277 (752)
Q Consensus 250 ----------~~~~l~~L~~L~Ls~N~l~~~~p~~~------------------------------------------~~ 277 (752)
.+..+++|+.|++++|.+++ +|..+ ..
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~ 345 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVD 345 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCB
T ss_pred chhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccccccccc
Confidence 12223455555555555442 22111 45
Q ss_pred CCCCCEEecCCCcCcCCC--CccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccc-hhhccccccc
Q 041438 278 SPQLQYLDLSSNYIVGEI--PTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVL-ESLGSLVKLY 354 (752)
Q Consensus 278 l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~ 354 (752)
+++|++|++++|.+++.. |..+.++++|+.|++++|.+.+..+. +..+++|++|++++|.+.+..+ ..|..+++|+
T Consensus 346 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 424 (570)
T 2z63_A 346 LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 424 (570)
T ss_dssp CTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCC
T ss_pred CCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCC
Confidence 788999999999998654 67788999999999999999876655 8899999999999999988765 5788999999
Q ss_pred EEEcCCCcCccccchhccccccCCeeecCCccCC-CCCCcccccccccceEEccCCcCCcCCchhhhccCCCcEEEccCC
Q 041438 355 YLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLG-EKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYN 433 (752)
Q Consensus 355 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 433 (752)
+|++++|++++..|..|.++++|++|+|++|.++ +.+|..+..+++|++|+|++|++++..|..|..+++|++|++++|
T Consensus 425 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 504 (570)
T 2z63_A 425 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASN 504 (570)
T ss_dssp EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCC
Confidence 9999999999889999999999999999999997 578888999999999999999999998999999999999999999
Q ss_pred cccCcCCCC-cccCCCCcccccCCCCCCCC
Q 041438 434 KLEGHIPNS-TTFRDAPLEALQGNKGLCGD 462 (752)
Q Consensus 434 ~l~~~~p~~-~~~~~~~~~~~~~n~~~c~~ 462 (752)
++++..|.. ..+..+....+.+|+..|..
T Consensus 505 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 505 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred cCCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 999877753 34556666788899988863
No 32
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=5e-43 Score=376.53 Aligned_cols=178 Identities=28% Similarity=0.338 Sum_probs=148.4
Q ss_pred HHHHHhhcccccceeeccCCceEEEEEEe----CCCcEEEEEccCCCCCC-----------------------CccccCC
Q 041438 494 EEIIRATNDFDAKHCIGKGGHGSVYIARV----PSGEIFAVKKFHSPLPD-----------------------NFCSHPR 546 (752)
Q Consensus 494 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~-----------------------~~~~~~~ 546 (752)
+.+-+..++|++.++||+|+||+||+|+. .+++.||||++...... +++.+.+
T Consensus 14 ~~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~ 93 (361)
T 4f9c_A 14 EAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKND 93 (361)
T ss_dssp HHSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred HhcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence 33344568899999999999999999984 35789999987543221 3455678
Q ss_pred ceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCC-CceEEeeccc
Q 041438 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLG-YEAHVSDFRI 625 (752)
Q Consensus 547 ~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~-~~~kl~DfG~ 625 (752)
..|+|||||++|+|.+++. .+++.+++.+++||+.||+|||++ ||+||||||+|||++.+ +.+||+|||+
T Consensus 94 ~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGl 164 (361)
T 4f9c_A 94 HVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGL 164 (361)
T ss_dssp EEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence 8999999999999999984 288899999999999999999999 99999999999999876 7999999999
Q ss_pred ceeccCCCC----------------------------CcccccCCCCccCccccccCC-CCCccchhhHHHHHHHHHhCC
Q 041438 626 AKFLNLDSS----------------------------NWSKLAGTHGNVAPELAYTMK-VTEKCDVYSFGVLALEVIKGK 676 (752)
Q Consensus 626 a~~~~~~~~----------------------------~~~~~~gt~~y~aPE~~~~~~-~~~ksDIwSlGvil~elltg~ 676 (752)
|+....... .....+||+.|+|||++.+.. |+.++||||+||++|||+||+
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~ 244 (361)
T 4f9c_A 165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244 (361)
T ss_dssp CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred CcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCC
Confidence 986543211 122347999999999988764 899999999999999999999
Q ss_pred CCcc
Q 041438 677 HPRD 680 (752)
Q Consensus 677 ~pf~ 680 (752)
.||.
T Consensus 245 ~Pf~ 248 (361)
T 4f9c_A 245 YPFY 248 (361)
T ss_dssp SSSS
T ss_pred CCCC
Confidence 9984
No 33
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.1e-41 Score=398.26 Aligned_cols=352 Identities=26% Similarity=0.303 Sum_probs=237.7
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceee
Q 041438 84 GRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILH 163 (752)
Q Consensus 84 ~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 163 (752)
.+++.++|+++.+.+ +++..|..+++|++|+|++|+++++.|.+|+++++|++|+|++|+++++.+..|+++++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRR-LPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCC-CCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCCC-cCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 467889999888876 4455789999999999999999999999999999999999999999977777899999999999
Q ss_pred ccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeecccccccccccccc--Ccccccccccccccc
Q 041438 164 ISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIG--NLKSLFDMKLCINQL 241 (752)
Q Consensus 164 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~l~l~~N~l 241 (752)
|++|++++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..+. .+++|+.|++++|++
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 999999988888899999999999999999988888899999999999999998887777654 447788888888887
Q ss_pred CCCcCCCC-------------------------------------------------CCCCC--CCCcEEEccccccCCC
Q 041438 242 NGAIPLSI-------------------------------------------------DWGRC--PQLSLLDVSINNITGN 270 (752)
Q Consensus 242 ~~~~~~~~-------------------------------------------------~~~~l--~~L~~L~Ls~N~l~~~ 270 (752)
++..|..+ .|..+ ++|+.|++++|++++.
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~ 263 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVV 263 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEE
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCcc
Confidence 76655321 11122 2366777777777666
Q ss_pred CCcccCCCCCCCEEecCCCcCcCCCCccccCCc---------------------------------ccCEEEccCCcCcc
Q 041438 271 IPFEIGESPQLQYLDLSSNYIVGEIPTQLGNII---------------------------------YLNRISLSGNKLSG 317 (752)
Q Consensus 271 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~---------------------------------~L~~L~Ls~N~l~~ 317 (752)
.|..|..+++|++|+|++|.+++..|..|.+++ +|+.|++++|++++
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~ 343 (680)
T 1ziw_A 264 GNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 343 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCC
T ss_pred CcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCC
Confidence 666666777777777777766665554444433 34444444444444
Q ss_pred cCCcccCCCcccceeeccccccc--cccchhhccc--ccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCC-
Q 041438 318 RIPGELGSLINLEYLDLSANHLS--NFVLESLGSL--VKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKIS- 392 (752)
Q Consensus 318 ~~p~~~~~l~~L~~L~Ls~N~l~--~~~~~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~- 392 (752)
..+..|.++++|++|++++|.++ .+....|..+ ++|+.|++++|++++..|..|..+++|++|+|++|.+++.+|
T Consensus 344 ~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 423 (680)
T 1ziw_A 344 IKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTG 423 (680)
T ss_dssp CCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCS
T ss_pred CChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCc
Confidence 44444444444444444333211 1111111111 133334444445555556666666666666666666655443
Q ss_pred cccccccccceEEccCCcCCcCCchhhhccCCCcEEEccCCccc
Q 041438 393 SRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLE 436 (752)
Q Consensus 393 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 436 (752)
..|..+++|++|++++|++++..+..|..+++|+.|++++|.++
T Consensus 424 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~ 467 (680)
T 1ziw_A 424 QEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALK 467 (680)
T ss_dssp GGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCB
T ss_pred ccccCcccccEEecCCCCcceeChhhhhcCcccccchhcccccc
Confidence 45666666666666666665555555555555555555555544
No 34
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.1e-43 Score=397.63 Aligned_cols=226 Identities=20% Similarity=0.288 Sum_probs=186.3
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCC---------------------------C---CccccCCce
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLP---------------------------D---NFCSHPRQS 548 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---------------------------~---~~~~~~~~~ 548 (752)
.++|++.+.||+|+||.||+|+. .+|+.||||++++... . ..+.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 57899999999999999999994 5799999998753210 0 345667889
Q ss_pred EEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeeccccee
Q 041438 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKF 628 (752)
Q Consensus 549 ~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~ 628 (752)
|+|||||+||+|.+++.+.+ .+++..++.|+.||+.||+|||++ |||||||||+|||++.+|++||+|||+|+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeee
Confidence 99999999999999997643 489999999999999999999999 999999999999999999999999999998
Q ss_pred ccCCCCCcccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChh
Q 041438 629 LNLDSSNWSKLAGTHGNVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLD 707 (752)
Q Consensus 629 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (752)
.... .....+||+.|||||++.+ ..|+.++||||+||++|||++|++||..... .........+.......|
T Consensus 342 ~~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~--~~~~~i~~~i~~~~~~~p--- 414 (689)
T 3v5w_A 342 FSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT--KDKHEIDRMTLTMAVELP--- 414 (689)
T ss_dssp CSSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGC--CCHHHHHHHHHHCCCCCC---
T ss_pred cCCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHhhcCCCCCCC---
Confidence 7543 2345699999999999864 5799999999999999999999999963211 111223344555555555
Q ss_pred hHHHHHHHHHHHHhccCcCCCCCCC-----HHHHHHH
Q 041438 708 VQNKFMSIMQVAFSCLDQNPVSRPT-----MKRFEVQ 739 (752)
Q Consensus 708 ~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~ 739 (752)
...++++.++|.+||++||++|++ ++|+.+|
T Consensus 415 -~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 415 -DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp -TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred -ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 245677899999999999999998 6787765
No 35
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.7e-41 Score=393.65 Aligned_cols=355 Identities=22% Similarity=0.206 Sum_probs=299.1
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceee
Q 041438 84 GRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILH 163 (752)
Q Consensus 84 ~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 163 (752)
..+..++++++.+.+ +.+.+|..+++|++|+|++|+|+++.|.+|+++++|++|+|++|++++..+..|+++++|++|+
T Consensus 56 ~~L~~L~Ls~n~l~~-i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 134 (606)
T 3vq2_A 56 SELQWLDLSRCEIET-IEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLN 134 (606)
T ss_dssp TTCCEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEE
T ss_pred ccCcEEeCCCCcccc-cCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEe
Confidence 467788999888875 3455789999999999999999998899999999999999999999988888899999999999
Q ss_pred ccCcccCC-CCCcccCCCCCCcEEEccCCCCCCcCCcCccCCC---------------------------cceEEeeccc
Q 041438 164 ISRNQLNG-SIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFT---------------------------NLVFLYLYNN 215 (752)
Q Consensus 164 Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~---------------------------~L~~L~L~~N 215 (752)
|++|.+++ .+|..|+++++|++|+|++|++++..|..|..++ +|+.|+|++|
T Consensus 135 L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n 214 (606)
T 3vq2_A 135 VAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGN 214 (606)
T ss_dssp CCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred CCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCC
Confidence 99999986 5688999999999999999998887766554433 2333333333
Q ss_pred ccc-----------------------------------------------------------------------------
Q 041438 216 SFS----------------------------------------------------------------------------- 218 (752)
Q Consensus 216 ~l~----------------------------------------------------------------------------- 218 (752)
.++
T Consensus 215 ~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~ 294 (606)
T 3vq2_A 215 FNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAG 294 (606)
T ss_dssp CSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEES
T ss_pred ccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecC
Confidence 321
Q ss_pred -------------------------cccc--------------------ccccCccccccccccccccCCCcCCCCCCCC
Q 041438 219 -------------------------GSIP--------------------QQIGNLKSLFDMKLCINQLNGAIPLSIDWGR 253 (752)
Q Consensus 219 -------------------------~~~p--------------------~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~ 253 (752)
+.+| ..+..+++|++|++++|++++..+....+..
T Consensus 295 ~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~ 374 (606)
T 3vq2_A 295 VSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLG 374 (606)
T ss_dssp CCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHC
T ss_pred ccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhcc
Confidence 1111 1223445566666666666655322334568
Q ss_pred CCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCC-ccccCCcccCEEEccCCcCcccCCcccCCCccccee
Q 041438 254 CPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIP-TQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYL 332 (752)
Q Consensus 254 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 332 (752)
+++|++|++++|.+++ +|..+..+++|++|++++|.+.+..| ..+.++++|+.|++++|.+++..|..+.++++|++|
T Consensus 375 ~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 453 (606)
T 3vq2_A 375 TNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTL 453 (606)
T ss_dssp CSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred CCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEE
Confidence 8999999999999986 56889999999999999999999888 789999999999999999999999999999999999
Q ss_pred ecccccccc-ccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcC
Q 041438 333 DLSANHLSN-FVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNL 411 (752)
Q Consensus 333 ~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 411 (752)
++++|.+++ ..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++.+|..+..+++|+.|+|++|++
T Consensus 454 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l 533 (606)
T 3vq2_A 454 KMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRI 533 (606)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCC
T ss_pred ECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcC
Confidence 999999998 5788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCchhhhccC-CCcEEEccCCcccCcCCC
Q 041438 412 SGLIPRCFEELH-GLLHIDISYNKLEGHIPN 441 (752)
Q Consensus 412 ~~~~p~~~~~l~-~L~~L~ls~N~l~~~~p~ 441 (752)
+.+ |..+..++ +|+.|++++|++.+..+.
T Consensus 534 ~~~-p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 534 ETS-KGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp CCE-ESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred ccc-CHhHhhhcccCcEEEccCCCcccCCcc
Confidence 955 66688887 699999999999986664
No 36
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=7.7e-41 Score=389.85 Aligned_cols=404 Identities=24% Similarity=0.250 Sum_probs=312.8
Q ss_pred cccCCCCccccCCCCCCCCccc----ceeeCCC----------CCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCc
Q 041438 55 SLLHSWSLSFVNATKISLCTWS----GIHCNHA----------GRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNE 120 (752)
Q Consensus 55 ~~l~sW~~~~~~~~~~~~c~w~----gv~C~~~----------~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~ 120 (752)
..+++|..+... ..++|.+. .|.|... ..++.+||+++.+.+ +++.+|.++++|++|||++|+
T Consensus 11 ~~~~~~~~~~p~--~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~-l~~~~f~~l~~L~~L~Ls~N~ 87 (635)
T 4g8a_A 11 DKLAAANSSIPE--SWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCE 87 (635)
T ss_dssp ----------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCC
T ss_pred chhhcccCCCCC--CCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCC-CCHHHHhCCCCCCEEECCCCc
Confidence 445666532211 12456553 4678632 257889999999874 566789999999999999999
Q ss_pred ccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCc-CCc
Q 041438 121 LFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGS-IPR 199 (752)
Q Consensus 121 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~ 199 (752)
|+++.|.+|++|++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|+++++|++|+|++|++++. .|.
T Consensus 88 i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~ 167 (635)
T 4g8a_A 88 IQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE 167 (635)
T ss_dssp CCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCG
T ss_pred CCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCch
Confidence 9999999999999999999999999998889999999999999999999988888999999999999999999864 688
Q ss_pred CccCCCcceEEeeccccccccccccccCccccc----cccccccccCCCcCCC---------------------------
Q 041438 200 SLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLF----DMKLCINQLNGAIPLS--------------------------- 248 (752)
Q Consensus 200 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~l~l~~N~l~~~~~~~--------------------------- 248 (752)
.+.++++|++|+|++|+|++..|..|..+.++. .++++.|.++...+..
T Consensus 168 ~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~ 247 (635)
T 4g8a_A 168 YFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQG 247 (635)
T ss_dssp GGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHT
T ss_pred hhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcC
Confidence 899999999999999999988888776655443 2333333332111000
Q ss_pred --------------------------------------------------------------------------CCCCCC
Q 041438 249 --------------------------------------------------------------------------IDWGRC 254 (752)
Q Consensus 249 --------------------------------------------------------------------------~~~~~l 254 (752)
..+...
T Consensus 248 l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 327 (635)
T 4g8a_A 248 LAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYN 327 (635)
T ss_dssp TTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSC
T ss_pred Ccccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccccccc
Confidence 011223
Q ss_pred CCCcEEEccccccCCCCCc-------------------ccCCCCCCCEEecCCCcCcCC---------------------
Q 041438 255 PQLSLLDVSINNITGNIPF-------------------EIGESPQLQYLDLSSNYIVGE--------------------- 294 (752)
Q Consensus 255 ~~L~~L~Ls~N~l~~~~p~-------------------~~~~l~~L~~L~Ls~N~l~~~--------------------- 294 (752)
..|+.|++++|.+.+..+. ....+++|+.|++++|.+...
T Consensus 328 ~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~ 407 (635)
T 4g8a_A 328 FGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFN 407 (635)
T ss_dssp CCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSC
T ss_pred hhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhcccc
Confidence 4556666666665443222 223466788888888876421
Q ss_pred ----CCccccCCcccCEEEccCCcCcccCC-cccCCCcccceeeccccccccccchhhcccccccEEEcCCCcC-ccccc
Q 041438 295 ----IPTQLGNIIYLNRISLSGNKLSGRIP-GELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKL-SQQIP 368 (752)
Q Consensus 295 ----~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~p 368 (752)
.+..+..+++|+.++++.|+.....+ ..|..+++++.++++.|.+.+..+..+..++.|+.|+|++|++ .+..|
T Consensus 408 ~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~ 487 (635)
T 4g8a_A 408 GVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLP 487 (635)
T ss_dssp SEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEEC
T ss_pred ccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCc
Confidence 23345566777777777776654433 5678899999999999999999999999999999999999985 45678
Q ss_pred hhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCchhhhccCCCcEEEccCCcccCcCCCCcc-c-C
Q 041438 369 IELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPNSTT-F-R 446 (752)
Q Consensus 369 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~-~-~ 446 (752)
..|..+++|++|+|++|+|++.+|..|.++++|++|+|++|+|++++|..|..+++|+.|||++|++++..|.... + .
T Consensus 488 ~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 567 (635)
T 4g8a_A 488 DIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPS 567 (635)
T ss_dssp SCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCT
T ss_pred hhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999887532 2 3
Q ss_pred CCCcccccCCCCCCC
Q 041438 447 DAPLEALQGNKGLCG 461 (752)
Q Consensus 447 ~~~~~~~~~n~~~c~ 461 (752)
.+....+.+||+.|.
T Consensus 568 ~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 568 SLAFLNLTQNDFACT 582 (635)
T ss_dssp TCCEEECTTCCBCCS
T ss_pred cCCEEEeeCCCCccc
Confidence 456678899999996
No 37
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.3e-41 Score=380.90 Aligned_cols=362 Identities=20% Similarity=0.223 Sum_probs=272.2
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceee
Q 041438 84 GRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILH 163 (752)
Q Consensus 84 ~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 163 (752)
..++.++++++.+.+. ++..|..+++|++|+|++|+|+++.|..|+++++|++|+|++|+|+. +|.. .+++|++|+
T Consensus 21 ~~L~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~ 96 (520)
T 2z7x_B 21 QKTTILNISQNYISEL-WTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH--PTVNLKHLD 96 (520)
T ss_dssp TTCSEEECCSSCCCCC-CHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC--CCCCCSEEE
T ss_pred ccccEEECCCCccccc-ChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc--ccCCccEEe
Confidence 4677788887777653 33467888888888888888888778888888888888888888874 4444 788888888
Q ss_pred ccCcccCC-CCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcc--eEEeeccccc--cccccccccC-----------
Q 041438 164 ISRNQLNG-SIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNL--VFLYLYNNSF--SGSIPQQIGN----------- 227 (752)
Q Consensus 164 Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~p~~~~~----------- 227 (752)
|++|+|++ .+|..|+++++|++|+|++|++++ ..|.++++| ++|+|++|++ .+..|..+.+
T Consensus 97 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~ 173 (520)
T 2z7x_B 97 LSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFP 173 (520)
T ss_dssp CCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECC
T ss_pred ccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEec
Confidence 88888876 467788888888888888888875 356667777 8888888888 6666666555
Q ss_pred ---------------ccccccccccccc-------cCCCcCCCCCCCC---------------------------CCCCc
Q 041438 228 ---------------LKSLFDMKLCINQ-------LNGAIPLSIDWGR---------------------------CPQLS 258 (752)
Q Consensus 228 ---------------l~~L~~l~l~~N~-------l~~~~~~~~~~~~---------------------------l~~L~ 258 (752)
+++|+.+++++|. +.+.+|. ++. +++|+
T Consensus 174 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~---l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~ 250 (520)
T 2z7x_B 174 TNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAK---LQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVW 250 (520)
T ss_dssp SSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHG---GGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCS
T ss_pred cCcchhhhhhhhhhcccceeeccccccccccccceeecchhh---hccccchhhccccccccCHHHHHHHHHHhhhCccc
Confidence 3344444444443 1111110 011 23567
Q ss_pred EEEccccccCCCCCccc-----CCCCCCCEEecCCCcC--------------------------cCCCCccccCCcccCE
Q 041438 259 LLDVSINNITGNIPFEI-----GESPQLQYLDLSSNYI--------------------------VGEIPTQLGNIIYLNR 307 (752)
Q Consensus 259 ~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l--------------------------~~~~p~~~~~l~~L~~ 307 (752)
+|++++|+++|.+|..+ ..+++|+.+++++|.+ .+.. .+..+++|++
T Consensus 251 ~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~ 328 (520)
T 2z7x_B 251 YFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLH 328 (520)
T ss_dssp EEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCE
T ss_pred EEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccE
Confidence 77777777777777666 5555555555555554 2211 1267889999
Q ss_pred EEccCCcCcccCCcccCCCcccceeecccccccc--ccchhhcccccccEEEcCCCcCccccch-hccccccCCeeecCC
Q 041438 308 ISLSGNKLSGRIPGELGSLINLEYLDLSANHLSN--FVLESLGSLVKLYYLNLSHNKLSQQIPI-ELDNLIHLSELDLSH 384 (752)
Q Consensus 308 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~ 384 (752)
|++++|++++..|..++.+++|++|+|++|++++ ..|..+..+++|++|+|++|++++.+|. .+..+++|++|+|++
T Consensus 329 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~ 408 (520)
T 2z7x_B 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSS 408 (520)
T ss_dssp EECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCS
T ss_pred EEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcC
Confidence 9999999999899999999999999999999998 4567899999999999999999985554 588999999999999
Q ss_pred ccCCCCCCcccccccccceEEccCCcCCcCCchhhhccCCCcEEEccCCcccCcCCC--CcccCCCCcccccCCCCCCC
Q 041438 385 NFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPN--STTFRDAPLEALQGNKGLCG 461 (752)
Q Consensus 385 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~--~~~~~~~~~~~~~~n~~~c~ 461 (752)
|++++..|..+. ++|+.|+|++|+++ .+|..+..+++|++|++++|++++ +|. ...+..+....+.+|+..|.
T Consensus 409 N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 409 NILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp SCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCccc
Confidence 999988777664 79999999999999 557777799999999999999995 554 33455566678899999885
No 38
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.1e-41 Score=376.75 Aligned_cols=305 Identities=21% Similarity=0.165 Sum_probs=224.2
Q ss_pred CCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEc
Q 041438 109 PHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLIL 188 (752)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 188 (752)
+++++|+|++|+|+++.|..|.++++|++|+|++|.|+++.|..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 58999999999999999999999999999999999999999999999999999999999999877778999999999999
Q ss_pred cCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccC
Q 041438 189 DSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNIT 268 (752)
Q Consensus 189 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 268 (752)
++|++++..|..|.++++|++|+|++|++++..+..|.++++|+ .|++++|+++
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~--------------------------~L~l~~n~l~ 165 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLE--------------------------QLTLEKCNLT 165 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCC--------------------------EEEEESCCCS
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCC--------------------------EEECCCCcCc
Confidence 99999999999999999999999999999887777776665555 5555555555
Q ss_pred CCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhc
Q 041438 269 GNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLG 348 (752)
Q Consensus 269 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 348 (752)
+..+..+..+++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.+|.......+|++|+|++|+++++++..|.
T Consensus 166 ~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 245 (477)
T 2id5_A 166 SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVR 245 (477)
T ss_dssp SCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHT
T ss_pred ccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhc
Confidence 44444555555566666666665555555555666666666666555555554444445666666666666665555666
Q ss_pred ccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCchhhhccCCCcEE
Q 041438 349 SLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHI 428 (752)
Q Consensus 349 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 428 (752)
.+++|+.|+|++|++++..+..|.++++|++|+|++|++++..|..|..+++|+.|+|++|+++++.+..|..+++|+.|
T Consensus 246 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 325 (477)
T 2id5_A 246 HLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETL 325 (477)
T ss_dssp TCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEE
T ss_pred CccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEE
Confidence 66666666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred EccCCcccCcC
Q 041438 429 DISYNKLEGHI 439 (752)
Q Consensus 429 ~ls~N~l~~~~ 439 (752)
++++|++.+..
T Consensus 326 ~l~~N~l~c~c 336 (477)
T 2id5_A 326 ILDSNPLACDC 336 (477)
T ss_dssp ECCSSCEECSG
T ss_pred EccCCCccCcc
Confidence 66666666543
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=8.5e-41 Score=383.88 Aligned_cols=342 Identities=21% Similarity=0.207 Sum_probs=227.8
Q ss_pred CCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEc
Q 041438 109 PHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLIL 188 (752)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 188 (752)
++|++|+|++|+|+++.|..|+++++|++|+|++|+|+++.|+.|.++++|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 45555555555555555555555555555555555555555555555555555555555555 33333 4555555555
Q ss_pred cCCCCCCc-CCcCccCCCcceEEeeccccccccccccccCcccc--cccccccccc--CCCcCCCCCC------------
Q 041438 189 DSNFLGGS-IPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSL--FDMKLCINQL--NGAIPLSIDW------------ 251 (752)
Q Consensus 189 ~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~l~l~~N~l--~~~~~~~~~~------------ 251 (752)
++|++++. +|..|+++++|++|+|++|++++. .+..+++| +.|++++|++ ++..|..+.-
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 205 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHP 205 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECS
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecC
Confidence 55555542 234555555555555555555432 22333333 5555555554 3333222100
Q ss_pred ------------C-------------------------------------------------------CCCCCcEEEccc
Q 041438 252 ------------G-------------------------------------------------------RCPQLSLLDVSI 264 (752)
Q Consensus 252 ------------~-------------------------------------------------------~l~~L~~L~Ls~ 264 (752)
. ..++|++|++++
T Consensus 206 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~ 285 (562)
T 3a79_B 206 NSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYN 285 (562)
T ss_dssp SSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEE
T ss_pred ccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEec
Confidence 0 112677777777
Q ss_pred cccCCCCCccc-----CCC--------------------------CCCCEEecCCCcCcCCCCccccCCcccCEEEccCC
Q 041438 265 NNITGNIPFEI-----GES--------------------------PQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGN 313 (752)
Q Consensus 265 N~l~~~~p~~~-----~~l--------------------------~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 313 (752)
|.++|.+|..+ ..+ .+|++|++++|.+.... ....+++|+.|++++|
T Consensus 286 n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n 363 (562)
T 3a79_B 286 LTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQN 363 (562)
T ss_dssp EEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSS
T ss_pred cEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCC
Confidence 77777777655 222 34666666666664221 1267889999999999
Q ss_pred cCcccCCcccCCCcccceeecccccccccc--chhhcccccccEEEcCCCcCccccc-hhccccccCCeeecCCccCCCC
Q 041438 314 KLSGRIPGELGSLINLEYLDLSANHLSNFV--LESLGSLVKLYYLNLSHNKLSQQIP-IELDNLIHLSELDLSHNFLGEK 390 (752)
Q Consensus 314 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~ 390 (752)
++++.+|..++++++|++|+|++|+++++. |..|..+++|++|+|++|++++.+| ..+..+++|++|+|++|++++.
T Consensus 364 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 443 (562)
T 3a79_B 364 VFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGS 443 (562)
T ss_dssp CCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGG
T ss_pred ccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcc
Confidence 999989999999999999999999999854 5678999999999999999998444 5688999999999999999887
Q ss_pred CCcccccccccceEEccCCcCCcCCchhhhccCCCcEEEccCCcccCcCCC-CcccCCCCcccccCCCCCCC
Q 041438 391 ISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPN-STTFRDAPLEALQGNKGLCG 461 (752)
Q Consensus 391 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~~~c~ 461 (752)
.|..+. ++|++|+|++|+++.+ |..+..+++|++|++++|++++..+. ...+..+....+.+|++.|.
T Consensus 444 ~~~~l~--~~L~~L~L~~N~l~~i-p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 444 VFRCLP--PKVKVLDLHNNRIMSI-PKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 512 (562)
T ss_dssp GGSSCC--TTCSEEECCSSCCCCC-CTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCC
T ss_pred hhhhhc--CcCCEEECCCCcCccc-ChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCC
Confidence 776554 7899999999999965 55555999999999999999954333 34455566678899999986
No 40
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=8.2e-42 Score=389.16 Aligned_cols=229 Identities=19% Similarity=0.281 Sum_probs=193.1
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC------------------------CccccCCceEEEEEe
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD------------------------NFCSHPRQSFIVYEY 554 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------------------------~~~~~~~~~~lV~E~ 554 (752)
.++|++.+.||+|+||.||+|+. .+|+.||||++...... +++.+....|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 46899999999999999999994 67999999988653211 445677899999999
Q ss_pred ccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCC--CceEEeecccceeccCC
Q 041438 555 LESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLG--YEAHVSDFRIAKFLNLD 632 (752)
Q Consensus 555 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~--~~~kl~DfG~a~~~~~~ 632 (752)
|+||+|.+++.... ..+++.+++.+++||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+...
T Consensus 236 ~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~ 310 (573)
T 3uto_A 236 MSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 310 (573)
T ss_dssp CCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred cCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence 99999999986533 3489999999999999999999999 99999999999999854 89999999999987633
Q ss_pred CCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHHH
Q 041438 633 SSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKF 712 (752)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (752)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||.. ....+....+.......+.......+
T Consensus 311 -~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~-----~~~~~~~~~i~~~~~~~~~~~~~~~s 384 (573)
T 3uto_A 311 -QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG-----ENDDETLRNVKSCDWNMDDSAFSGIS 384 (573)
T ss_dssp -SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC-----SSHHHHHHHHHTTCCCCCSGGGTTSC
T ss_pred -CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-----cCHHHHHHHHHhCCCCCCcccccCCC
Confidence 334456899999999999999999999999999999999999999952 22333445555555555555556677
Q ss_pred HHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 713 MSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 713 ~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
+++.++|.+||+.||++|||++|+++|
T Consensus 385 ~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 385 EDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 889999999999999999999999986
No 41
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.5e-40 Score=393.15 Aligned_cols=346 Identities=20% Similarity=0.210 Sum_probs=297.6
Q ss_pred CCEEEEEcCCCCCcc-----------------cccccccC--CCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCc
Q 041438 84 GRVFGINLTSISLNG-----------------TLLEFSFS--SFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNK 144 (752)
Q Consensus 84 ~~v~~l~l~~~~l~g-----------------~l~~~~f~--~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 144 (752)
..+..++|+++.+.| .+++ .++ .+++|++|+|++|++.+.+|..|+++++|++|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~-~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENE-ELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCCh-hhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 467889999999998 2443 444 99999999999999999999999999999999999998
Q ss_pred -ccc-cCCccccccc-------ccceeeccCcccCCCCCc--ccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeec
Q 041438 145 -LSG-HIPSEISLLT-------HLTILHISRNQLNGSIPH--EVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLY 213 (752)
Q Consensus 145 -l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 213 (752)
++| .+|..|+.++ +|++|+|++|+|+ .+|. .|+++++|++|+|++|+++ .+| .|.++++|+.|+|+
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls 603 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLD 603 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECC
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECc
Confidence 998 8898888777 9999999999999 8888 9999999999999999999 778 89999999999999
Q ss_pred cccccccccccccCccc-cccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcc---cC--CCCCCCEEecC
Q 041438 214 NNSFSGSIPQQIGNLKS-LFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFE---IG--ESPQLQYLDLS 287 (752)
Q Consensus 214 ~N~l~~~~p~~~~~l~~-L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~---~~--~l~~L~~L~Ls 287 (752)
+|+++ .+|..+.++++ |+.|++++|+++ .+|..+.....++|+.|+|++|++++.+|.. +. .+++|+.|+|+
T Consensus 604 ~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls 681 (876)
T 4ecn_A 604 YNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLS 681 (876)
T ss_dssp SSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECC
T ss_pred CCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEcc
Confidence 99999 88989999999 999999999999 6675543333456999999999999877632 22 34589999999
Q ss_pred CCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCC-------Ccccceeeccccccccccchhhc--ccccccEEEc
Q 041438 288 SNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGS-------LINLEYLDLSANHLSNFVLESLG--SLVKLYYLNL 358 (752)
Q Consensus 288 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-------l~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~L 358 (752)
+|.++...+..+..+++|+.|+|++|+|+...+..+.. +++|++|+|++|+|+. +|..+. .+++|+.|+|
T Consensus 682 ~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~~-lp~~l~~~~l~~L~~L~L 760 (876)
T 4ecn_A 682 YNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTS-LSDDFRATTLPYLSNMDV 760 (876)
T ss_dssp SSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCCC-CCGGGSTTTCTTCCEEEC
T ss_pred CCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCcc-chHHhhhccCCCcCEEEe
Confidence 99999544445568999999999999999544444433 3499999999999995 456665 8999999999
Q ss_pred CCCcCccccchhccccccCCeeecCC------ccCCCCCCcccccccccceEEccCCcCCcCCchhhhccCCCcEEEccC
Q 041438 359 SHNKLSQQIPIELDNLIHLSELDLSH------NFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISY 432 (752)
Q Consensus 359 s~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 432 (752)
++|+|++ +|..+..+++|+.|+|++ |++.+.+|..+..+++|+.|+|++|++ +.+|..+. ++|+.|||++
T Consensus 761 s~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~ 836 (876)
T 4ecn_A 761 SYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIAD 836 (876)
T ss_dssp CSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCS
T ss_pred CCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCC
Confidence 9999997 788899999999999976 888999999999999999999999999 66677665 6999999999
Q ss_pred CcccCcCC
Q 041438 433 NKLEGHIP 440 (752)
Q Consensus 433 N~l~~~~p 440 (752)
|++...-+
T Consensus 837 N~l~~i~~ 844 (876)
T 4ecn_A 837 NPNISIDV 844 (876)
T ss_dssp CTTCEEEC
T ss_pred CCCCccCh
Confidence 99875443
No 42
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=375.99 Aligned_cols=356 Identities=21% Similarity=0.219 Sum_probs=281.9
Q ss_pred CCcccceee---CCCCCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccc-
Q 041438 72 LCTWSGIHC---NHAGRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSG- 147 (752)
Q Consensus 72 ~c~w~gv~C---~~~~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~- 147 (752)
.|...++.. ..-..+..++|+++.+.+.. +..|..+++|++|+|++|+|+++ |.. .+++|++|+|++|++++
T Consensus 30 ~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~l-p~~--~l~~L~~L~L~~N~l~~~ 105 (520)
T 2z7x_B 30 QNYISELWTSDILSLSKLRILIISHNRIQYLD-ISVFKFNQELEYLDLSHNKLVKI-SCH--PTVNLKHLDLSFNAFDAL 105 (520)
T ss_dssp SSCCCCCCHHHHTTCTTCCEEECCSSCCCEEE-GGGGTTCTTCCEEECCSSCCCEE-ECC--CCCCCSEEECCSSCCSSC
T ss_pred CCcccccChhhccccccccEEecCCCccCCcC-hHHhhcccCCCEEecCCCceeec-Ccc--ccCCccEEeccCCccccc
Confidence 355555543 23356888999999988643 45899999999999999999974 544 89999999999999998
Q ss_pred cCCcccccccccceeeccCcccCCCCCcccCCCCCC--cEEEccCCCC--CCcCCcCccC--------------------
Q 041438 148 HIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFL--NHLILDSNFL--GGSIPRSLSN-------------------- 203 (752)
Q Consensus 148 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~p~~~~~-------------------- 203 (752)
.+|..|+++++|++|+|++|.|++ ..|..+++| ++|+|++|++ .+..|..|..
T Consensus 106 ~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~ 182 (520)
T 2z7x_B 106 PICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFIL 182 (520)
T ss_dssp CCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCC
T ss_pred cchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhh
Confidence 478999999999999999999986 467888888 9999999999 7777776665
Q ss_pred ------CCcceEEeecccc-------ccccccccccCc---------------------------cccccccccccccCC
Q 041438 204 ------FTNLVFLYLYNNS-------FSGSIPQQIGNL---------------------------KSLFDMKLCINQLNG 243 (752)
Q Consensus 204 ------l~~L~~L~L~~N~-------l~~~~p~~~~~l---------------------------~~L~~l~l~~N~l~~ 243 (752)
+++|+.|++++|. +.+.+| .++.+ ++|++|++++|+++|
T Consensus 183 ~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 261 (520)
T 2z7x_B 183 DVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQG 261 (520)
T ss_dssp CCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEES
T ss_pred hhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccC
Confidence 4455555555554 333332 22222 245555555566655
Q ss_pred CcCCCCC---CCCCCC--------------------------CcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCC
Q 041438 244 AIPLSID---WGRCPQ--------------------------LSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGE 294 (752)
Q Consensus 244 ~~~~~~~---~~~l~~--------------------------L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 294 (752)
.+|..+. .+.+++ |+.|++++|.+.+.. .+..+++|++|++++|++++.
T Consensus 262 ~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~ 339 (520)
T 2z7x_B 262 QLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDT 339 (520)
T ss_dssp CCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTT
T ss_pred ccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChh
Confidence 5554320 033444 555555555554321 126889999999999999999
Q ss_pred CCccccCCcccCEEEccCCcCcc--cCCcccCCCcccceeecccccccc-ccchhhcccccccEEEcCCCcCccccchhc
Q 041438 295 IPTQLGNIIYLNRISLSGNKLSG--RIPGELGSLINLEYLDLSANHLSN-FVLESLGSLVKLYYLNLSHNKLSQQIPIEL 371 (752)
Q Consensus 295 ~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 371 (752)
+|..++++++|+.|++++|++++ .+|..++.+++|++|+|++|.+++ ++...+..+++|++|++++|++++..|..+
T Consensus 340 ~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l 419 (520)
T 2z7x_B 340 VFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCL 419 (520)
T ss_dssp TTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSC
T ss_pred hhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhh
Confidence 99999999999999999999997 566789999999999999999999 655668999999999999999998888776
Q ss_pred cccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCchhhhccCCCcEEEccCCcccCcCC
Q 041438 372 DNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIP 440 (752)
Q Consensus 372 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 440 (752)
. ++|+.|+|++|+++ .+|..+..+++|++|+|++|+++++++..|..+++|++|++++|++++..+
T Consensus 420 ~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 420 P--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp C--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred c--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 5 79999999999998 567777799999999999999997766569999999999999999998654
No 43
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=381.98 Aligned_cols=346 Identities=22% Similarity=0.208 Sum_probs=299.2
Q ss_pred CCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEc
Q 041438 109 PHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLIL 188 (752)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 188 (752)
+++++|+|++|+|+++.+.+|.++++|++|+|++|+++++.|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred cCCCCCCcCCcCccCCCcceEEeeccccccc-cccccccCccccccccccccccCCCcCCCCCCCCCCCC----cEEEcc
Q 041438 189 DSNFLGGSIPRSLSNFTNLVFLYLYNNSFSG-SIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQL----SLLDVS 263 (752)
Q Consensus 189 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L----~~L~Ls 263 (752)
++|++++..+..|+++++|++|+|++|.+++ .+|..|+++++|+.|++++|++++..+.. ++.+++| ..|+++
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~--~~~l~~L~~~~~~L~l~ 185 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD--LRVLHQMPLLNLSLDLS 185 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGG--GHHHHTCTTCCCEEECT
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHH--ccchhccchhhhhcccC
Confidence 9999998877789999999999999999997 46999999999999999999998766543 3344455 566776
Q ss_pred ccccCCCC------------------------------------------------------------------------
Q 041438 264 INNITGNI------------------------------------------------------------------------ 271 (752)
Q Consensus 264 ~N~l~~~~------------------------------------------------------------------------ 271 (752)
+|.+++..
T Consensus 186 ~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 265 (570)
T 2z63_A 186 LNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265 (570)
T ss_dssp TCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEE
T ss_pred CCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhh
Confidence 66655433
Q ss_pred ---------CcccCCCCCCCEEecCCCcCcCCCCccc------------------------------------------c
Q 041438 272 ---------PFEIGESPQLQYLDLSSNYIVGEIPTQL------------------------------------------G 300 (752)
Q Consensus 272 ---------p~~~~~l~~L~~L~Ls~N~l~~~~p~~~------------------------------------------~ 300 (752)
|..+..+++|++|++++|.+++ +|..+ .
T Consensus 266 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~ 344 (570)
T 2z63_A 266 YLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEV 344 (570)
T ss_dssp ETTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCC
T ss_pred cchhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccc
Confidence 3344556778888888887763 34322 4
Q ss_pred CCcccCEEEccCCcCcccC--CcccCCCcccceeeccccccccccchhhcccccccEEEcCCCcCccccc-hhccccccC
Q 041438 301 NIIYLNRISLSGNKLSGRI--PGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIP-IELDNLIHL 377 (752)
Q Consensus 301 ~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L 377 (752)
.+++|+.|++++|++++.. |..+.++++|++|++++|.+++.++. +..+++|+.|++++|++++..| ..+..+++|
T Consensus 345 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 423 (570)
T 2z63_A 345 DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 423 (570)
T ss_dssp BCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTC
T ss_pred cCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCC
Confidence 5678999999999998664 67888999999999999999998776 9999999999999999988766 578999999
Q ss_pred CeeecCCccCCCCCCcccccccccceEEccCCcCC-cCCchhhhccCCCcEEEccCCcccCcCCCC-cccCCCCcccccC
Q 041438 378 SELDLSHNFLGEKISSRICRMESLEKLNLSYNNLS-GLIPRCFEELHGLLHIDISYNKLEGHIPNS-TTFRDAPLEALQG 455 (752)
Q Consensus 378 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~ 455 (752)
++|++++|.+.+..|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|++++|++++..|.. .....+....+.+
T Consensus 424 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 503 (570)
T 2z63_A 424 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503 (570)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCC
Confidence 99999999999999999999999999999999998 678999999999999999999999987754 3445556667777
Q ss_pred CCC
Q 041438 456 NKG 458 (752)
Q Consensus 456 n~~ 458 (752)
|.-
T Consensus 504 n~l 506 (570)
T 2z63_A 504 NQL 506 (570)
T ss_dssp SCC
T ss_pred CcC
Confidence 753
No 44
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=7.4e-40 Score=378.36 Aligned_cols=335 Identities=21% Similarity=0.222 Sum_probs=297.4
Q ss_pred CCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEE
Q 041438 107 SFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHL 186 (752)
Q Consensus 107 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 186 (752)
.+++++.|++++|.+..+.+..|.++++|++|+|++|.|+++.|..|+.+++|++|+|++|.|++..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 46789999999999999888889999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccc
Q 041438 187 ILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINN 266 (752)
Q Consensus 187 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~ 266 (752)
+|++|.|++.++..|.++++|++|+|++|.|++..|..|+++++|+.|++++|.+++.. ++.+++|+.|++++|.
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-----~~~l~~L~~L~l~~n~ 203 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD-----LSLIPSLFHANVSYNL 203 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC-----GGGCTTCSEEECCSSC
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC-----hhhhhhhhhhhcccCc
Confidence 99999999888888899999999999999999999999999999999999999998752 4567999999999999
Q ss_pred cCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchh
Q 041438 267 ITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLES 346 (752)
Q Consensus 267 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 346 (752)
+++. ...++|+.|++++|.+....+.. .++|+.|+|++|.+++ +..+..+++|++|+|++|.+++.+|..
T Consensus 204 l~~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~ 273 (597)
T 3oja_B 204 LSTL-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHP 273 (597)
T ss_dssp CSEE-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGG
T ss_pred cccc-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHH
Confidence 9853 34568999999999998554433 2689999999999987 477999999999999999999999999
Q ss_pred hcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCchhhhccCCCc
Q 041438 347 LGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLL 426 (752)
Q Consensus 347 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 426 (752)
|+.+++|+.|+|++|++++ +|..+..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|++++.. +..+++|+
T Consensus 274 ~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~ 348 (597)
T 3oja_B 274 FVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLK 348 (597)
T ss_dssp GTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCS
T ss_pred hcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCCc-cCcccccCCCCCEEECCCCCCCCcC---hhhcCCCC
Confidence 9999999999999999986 57778889999999999999985 6677889999999999999999874 66778999
Q ss_pred EEEccCCcccCcCCCCcccCCCCcccccCCCCCCCC
Q 041438 427 HIDISYNKLEGHIPNSTTFRDAPLEALQGNKGLCGD 462 (752)
Q Consensus 427 ~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~ 462 (752)
.|++++|++++..+. .-+.......+.+++..|+.
T Consensus 349 ~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~ 383 (597)
T 3oja_B 349 NLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKI 383 (597)
T ss_dssp EEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCT
T ss_pred EEEeeCCCCCChhHH-HHHHHHhhhccccccccCCc
Confidence 999999999875432 12334444567788888874
No 45
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.9e-39 Score=372.60 Aligned_cols=334 Identities=22% Similarity=0.250 Sum_probs=274.3
Q ss_pred CCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccC
Q 041438 111 LAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDS 190 (752)
Q Consensus 111 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 190 (752)
.+++|+++|++++ +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 33 ~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 33 ESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 3679999999998 565554 8999999999999999889999999999999999999999999999999999999999
Q ss_pred CCCCCcCCcCccCCCcceEEeecccccccc-ccccccCccccccccccccccCCCcCCCCCCCCCCCC--cEEEcccccc
Q 041438 191 NFLGGSIPRSLSNFTNLVFLYLYNNSFSGS-IPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQL--SLLDVSINNI 267 (752)
Q Consensus 191 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L--~~L~Ls~N~l 267 (752)
|+|+. +|.. .+++|++|+|++|++++. +|..|+++++|++|++++|++++. .+..+++| +.|++++|.+
T Consensus 110 N~l~~-lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~-----~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 110 NRLQN-ISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL-----DLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp SCCCE-ECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT-----TTGGGTTSCEEEEEEEESSC
T ss_pred CcCCc-cCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC-----chhhhhhceeeEEEeecccc
Confidence 99994 5655 899999999999999974 578999999999999999999863 34455666 9999999999
Q ss_pred --CCCCCcccCCCC------------------------------------------------------------------
Q 041438 268 --TGNIPFEIGESP------------------------------------------------------------------ 279 (752)
Q Consensus 268 --~~~~p~~~~~l~------------------------------------------------------------------ 279 (752)
++..|..+..+.
T Consensus 182 ~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l 261 (562)
T 3a79_B 182 HIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIET 261 (562)
T ss_dssp CCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEE
T ss_pred cccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcC
Confidence 777777665543
Q ss_pred ---------------CCCEEecCCCcCcCCCCccc-----cCCc--------------------------ccCEEEccCC
Q 041438 280 ---------------QLQYLDLSSNYIVGEIPTQL-----GNII--------------------------YLNRISLSGN 313 (752)
Q Consensus 280 ---------------~L~~L~Ls~N~l~~~~p~~~-----~~l~--------------------------~L~~L~Ls~N 313 (752)
+|++|++++|.++|.+|..+ .+++ +|+.|++++|
T Consensus 262 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n 341 (562)
T 3a79_B 262 TWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDT 341 (562)
T ss_dssp CHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESS
T ss_pred cHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCC
Confidence 56667777777776666655 3332 2555555555
Q ss_pred cCcccCCcccCCCcccceeeccccccccccchhhcccccccEEEcCCCcCccc--cchhccccccCCeeecCCccCCC-C
Q 041438 314 KLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQ--IPIELDNLIHLSELDLSHNFLGE-K 390 (752)
Q Consensus 314 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~-~ 390 (752)
.+.... ....+++|++|+|++|++++..|..+..+++|++|+|++|++++. .|..|.++++|++|+|++|++++ .
T Consensus 342 ~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 419 (562)
T 3a79_B 342 PFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHA 419 (562)
T ss_dssp CCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCC
T ss_pred Cccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCcc
Confidence 553211 126889999999999999999999999999999999999999874 45779999999999999999998 4
Q ss_pred CCcccccccccceEEccCCcCCcCCchhhhccCCCcEEEccCCcccCcCCCCcccCCCCcccccCCCCC
Q 041438 391 ISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPNSTTFRDAPLEALQGNKGL 459 (752)
Q Consensus 391 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~ 459 (752)
.+..+..+++|++|+|++|++++.+|..+. ++|+.|++++|+++...+.......+....+.+|.-.
T Consensus 420 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~ 486 (562)
T 3a79_B 420 YDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLK 486 (562)
T ss_dssp SSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCC
T ss_pred ChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCC
Confidence 555688999999999999999988776654 7899999999999843333445555666677777643
No 46
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-39 Score=356.76 Aligned_cols=335 Identities=21% Similarity=0.231 Sum_probs=293.6
Q ss_pred CCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEE
Q 041438 107 SFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHL 186 (752)
Q Consensus 107 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 186 (752)
.++++++|++++|.++.+.+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|+++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 46899999999999999888889999999999999999999988999999999999999999999999999999999999
Q ss_pred EccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccc
Q 041438 187 ILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINN 266 (752)
Q Consensus 187 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~ 266 (752)
+|++|+++...+..|.++++|++|+|++|++++..|..|.++++|++|++++|++++. .++.+++|+.|++++|.
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-----~~~~l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-----DLSLIPSLFHANVSYNL 197 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC-----CGGGCTTCSEEECCSSC
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc-----ccccccccceeeccccc
Confidence 9999999977777789999999999999999999899999999999999999999865 24577999999999999
Q ss_pred cCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchh
Q 041438 267 ITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLES 346 (752)
Q Consensus 267 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 346 (752)
+++. ...++|++|++++|.+... |.. ..++|+.|++++|++++. ..+..+++|++|+|++|.+++..+..
T Consensus 198 l~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~ 267 (390)
T 3o6n_A 198 LSTL-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHP 267 (390)
T ss_dssp CSEE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGG
T ss_pred cccc-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhH
Confidence 8753 3456899999999999865 332 247899999999999864 57899999999999999999999999
Q ss_pred hcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCchhhhccCCCc
Q 041438 347 LGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLL 426 (752)
Q Consensus 347 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 426 (752)
|..+++|++|+|++|++++ +|..+..+++|++|+|++|++++ +|..+..+++|+.|+|++|++++.. +..+++|+
T Consensus 268 ~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~ 342 (390)
T 3o6n_A 268 FVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLK 342 (390)
T ss_dssp GTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCS
T ss_pred ccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCccee-cCccccccCcCCEEECCCCccceeC---chhhccCC
Confidence 9999999999999999985 56677889999999999999985 5666888999999999999999873 67788999
Q ss_pred EEEccCCcccCcCCCCcccCCCCcccccCCCCCCCC
Q 041438 427 HIDISYNKLEGHIPNSTTFRDAPLEALQGNKGLCGD 462 (752)
Q Consensus 427 ~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~ 462 (752)
.|++++|++++.... ..+.......+.+++..|..
T Consensus 343 ~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 343 NLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKI 377 (390)
T ss_dssp EEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCT
T ss_pred EEEcCCCCccchhHH-HHHHHHHhhcccccCceecc
Confidence 999999999874321 12333344456677777763
No 47
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.5e-39 Score=386.44 Aligned_cols=305 Identities=21% Similarity=0.221 Sum_probs=240.7
Q ss_pred CCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccC-CcccccccccceeeccCcccCCCCCcccCCCCCCcE
Q 041438 107 SFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHI-PSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNH 185 (752)
Q Consensus 107 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 185 (752)
-.++|++|||++|+|+++.|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.|++..|..|+++++|++
T Consensus 22 lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 101 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFE 101 (844)
T ss_dssp SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCC
T ss_pred CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCE
Confidence 4578999999999999999999999999999999999665555 889999999999999999999999999999999999
Q ss_pred EEccCCCCCCcCCcC--ccCCCcceEEeecccccccccc-ccccCccccccccccccccCCCcCCCCCCCCC--CCCcEE
Q 041438 186 LILDSNFLGGSIPRS--LSNFTNLVFLYLYNNSFSGSIP-QQIGNLKSLFDMKLCINQLNGAIPLSIDWGRC--PQLSLL 260 (752)
Q Consensus 186 L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l--~~L~~L 260 (752)
|+|++|++++.+|.. |.++++|++|+|++|.+++..+ ..|+++++|++|++++|++++..+..+ ..+ ++|+.|
T Consensus 102 L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l--~~l~~~~L~~L 179 (844)
T 3j0a_A 102 LRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHEL--EPLQGKTLSFF 179 (844)
T ss_dssp EECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGG--HHHHHCSSCCC
T ss_pred eeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHc--ccccCCccceE
Confidence 999999999876665 9999999999999999998765 579999999999999999998776543 333 677777
Q ss_pred EccccccCCCCCcccCCCCC------CCEEecCCCcCcCCCCccccC---------------------------------
Q 041438 261 DVSINNITGNIPFEIGESPQ------LQYLDLSSNYIVGEIPTQLGN--------------------------------- 301 (752)
Q Consensus 261 ~Ls~N~l~~~~p~~~~~l~~------L~~L~Ls~N~l~~~~p~~~~~--------------------------------- 301 (752)
+++.|.+++..|..+..+++ |++|++++|.+++..|..+..
T Consensus 180 ~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~ 259 (844)
T 3j0a_A 180 SLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNT 259 (844)
T ss_dssp EECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTT
T ss_pred ECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhh
Confidence 77777777776666655554 777777777666554443321
Q ss_pred -----CcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhcccccccEEEcCCCcCccccchhcccccc
Q 041438 302 -----IIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIH 376 (752)
Q Consensus 302 -----l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 376 (752)
.++|+.|++++|.+.+..|..|..+++|+.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++
T Consensus 260 f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 339 (844)
T 3j0a_A 260 FAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPK 339 (844)
T ss_dssp TTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTT
T ss_pred hhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCC
Confidence 145677777777777666677777777777777777777766667777777777777777776666667777777
Q ss_pred CCeeecCCccCCCCCCcccccccccceEEccCCcCCc
Q 041438 377 LSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSG 413 (752)
Q Consensus 377 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 413 (752)
|+.|+|++|.+.+..+..|..+++|+.|+|++|.+++
T Consensus 340 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 340 VAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp CCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred CCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 7777777777766666666667777777777766654
No 48
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.7e-39 Score=346.73 Aligned_cols=258 Identities=31% Similarity=0.561 Sum_probs=206.0
Q ss_pred cccchHHHHHHhhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-------------------------Ccc
Q 041438 488 LGKIVYEEIIRATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-------------------------NFC 542 (752)
Q Consensus 488 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------------------------~~~ 542 (752)
..+++++++....++|++.+.||+|+||.||+|+..+++.||||++...... +++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 3457889999999999999999999999999999888999999998654321 445
Q ss_pred ccCCceEEEEEeccCCChHHHhccCcc-ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEe
Q 041438 543 SHPRQSFIVYEYLESGSLDKILNNDAS-AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVS 621 (752)
Q Consensus 543 ~~~~~~~lV~E~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~ 621 (752)
......++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 567788999999999999999987543 3458999999999999999999999877799999999999999999999999
Q ss_pred ecccceeccCCCCC-cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhcccccc-----------
Q 041438 622 DFRIAKFLNLDSSN-WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS----------- 689 (752)
Q Consensus 622 DfG~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~----------- 689 (752)
|||+++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||+.........
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence 99999876543322 233469999999999988889999999999999999999999996322111111
Q ss_pred -ccchHhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcCC
Q 041438 690 -SNMNIEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNP 747 (752)
Q Consensus 690 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 747 (752)
........+..... ......+..+.+++.+||+.||++|||++|++++|+......
T Consensus 257 ~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~ 313 (326)
T 3uim_A 257 KEKKLEALVDVDLQG--NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAE 313 (326)
T ss_dssp SSCCSTTSSCTTCTT--SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSS
T ss_pred hchhhhhhcChhhcc--ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhh
Confidence 00111111111111 123566788999999999999999999999999998765443
No 49
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.9e-39 Score=370.29 Aligned_cols=347 Identities=24% Similarity=0.216 Sum_probs=267.0
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCccccc-CCccccccccccee
Q 041438 84 GRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGH-IPSEISLLTHLTIL 162 (752)
Q Consensus 84 ~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L 162 (752)
..+..++++++.+.+. ++.+|..+++|++|+|++|++++..|..|+++++|++|+|++|++++. .|..|+++++|++|
T Consensus 50 ~~L~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 50 ANLQVLILKSSRINTI-EGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp TTCCEEECTTSCCCEE-CTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CcccEEECCCCCcCcc-ChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 4688899999988864 456799999999999999999999888899999999999999999974 57789999999999
Q ss_pred eccCcccCCCCC-cccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCcccccccccccccc
Q 041438 163 HISRNQLNGSIP-HEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQL 241 (752)
Q Consensus 163 ~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l 241 (752)
+|++|.+.+.+| ..|.++++|++|+|++|++++..|..+.++++|++|++++|.+....+..++.+++|++|++++|++
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l 208 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNL 208 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBC
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCcc
Confidence 999999544554 6899999999999999999999999998888777777777776533333334566666666666666
Q ss_pred CCCc--CCC-----------------------------------------------------------------------
Q 041438 242 NGAI--PLS----------------------------------------------------------------------- 248 (752)
Q Consensus 242 ~~~~--~~~----------------------------------------------------------------------- 248 (752)
++.. |..
T Consensus 209 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l 288 (549)
T 2z81_A 209 ARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTI 288 (549)
T ss_dssp TTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEE
T ss_pred ccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccc
Confidence 5521 000
Q ss_pred ------------------------------------C--C-CCCCCCCcEEEccccccCCCCC---cccCCCCCCCEEec
Q 041438 249 ------------------------------------I--D-WGRCPQLSLLDVSINNITGNIP---FEIGESPQLQYLDL 286 (752)
Q Consensus 249 ------------------------------------~--~-~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L 286 (752)
+ . +..+++|++|++++|++++.+| ..++.+++|++|+|
T Consensus 289 ~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~L 368 (549)
T 2z81_A 289 RRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVL 368 (549)
T ss_dssp ESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEEC
T ss_pred cccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEc
Confidence 0 0 0235667777777777766553 23566677777777
Q ss_pred CCCcCcCCCC--ccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhcccccccEEEcCCCcCc
Q 041438 287 SSNYIVGEIP--TQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLS 364 (752)
Q Consensus 287 s~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 364 (752)
++|++++..+ ..+..+++|+.|++++|+++ .+|..+..+++|++|+|++|++++++... .++|++|+|++|+++
T Consensus 369 s~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~---~~~L~~L~Ls~N~l~ 444 (549)
T 2z81_A 369 SQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCI---PQTLEVLDVSNNNLD 444 (549)
T ss_dssp TTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTS---CTTCSEEECCSSCCS
T ss_pred cCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccchh---cCCceEEECCCCChh
Confidence 7777765432 44667777777777777777 45666777777777777777776543322 256777788888777
Q ss_pred cccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCchhhhccCCCcEEEccCCcccCcCCC
Q 041438 365 QQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPN 441 (752)
Q Consensus 365 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 441 (752)
+.+ ..+++|++|+|++|+|+. +|. ...+++|+.|+|++|++++.+|..|..+++|+.|++++|++.+.+|.
T Consensus 445 ~~~----~~l~~L~~L~Ls~N~l~~-ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 445 SFS----LFLPRLQELYISRNKLKT-LPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp CCC----CCCTTCCEEECCSSCCSS-CCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred hhc----ccCChhcEEECCCCccCc-CCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 643 578999999999999985 454 46789999999999999999999999999999999999999988773
No 50
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.4e-39 Score=342.46 Aligned_cols=227 Identities=24% Similarity=0.361 Sum_probs=186.3
Q ss_pred hhcccccceeeccCCceEEEEEE-eCCCcEEEEEccCCCCCC------------------------CccccCCceEEEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVKKFHSPLPD------------------------NFCSHPRQSFIVYE 553 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------------------------~~~~~~~~~~lV~E 553 (752)
..++|++.+.||+|+||.||+|+ ..+++.||||++...... +++...+..++|||
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 35689999999999999999999 467999999987543221 34556778999999
Q ss_pred eccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCC
Q 041438 554 YLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS 633 (752)
Q Consensus 554 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~ 633 (752)
|+++|+|.+++.... +++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~~~L~~~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (297)
T 3fxz_A 98 YLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (297)
T ss_dssp CCTTCBHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCCCCHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence 999999999997643 88899999999999999999999 99999999999999999999999999998876555
Q ss_pred CCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhc-cCCCCCChhhHHHH
Q 041438 634 SNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILD-SRLPYPSLDVQNKF 712 (752)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 712 (752)
.......||+.|+|||++.+..+++++||||+||++|||++|+.||... ........+.. ...... .....+
T Consensus 171 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-----~~~~~~~~~~~~~~~~~~--~~~~~~ 243 (297)
T 3fxz_A 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-----NPLRALYLIATNGTPELQ--NPEKLS 243 (297)
T ss_dssp CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHHHHHHCSCCCS--CGGGSC
T ss_pred cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCCCCC--CccccC
Confidence 5555668999999999999999999999999999999999999998521 11111111111 111111 124456
Q ss_pred HHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 713 MSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 713 ~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
..+.+++.+||+.||++|||++|+++|
T Consensus 244 ~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 244 AIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 678999999999999999999999875
No 51
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.4e-39 Score=344.32 Aligned_cols=239 Identities=28% Similarity=0.387 Sum_probs=184.0
Q ss_pred HHHHhhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC--------------------------CccccCCce
Q 041438 495 EIIRATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD--------------------------NFCSHPRQS 548 (752)
Q Consensus 495 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~ 548 (752)
++....++|++.+.||+|+||.||+|+. +|+.||||++...... +++......
T Consensus 31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 3p86_A 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109 (309)
T ss_dssp -CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCC
T ss_pred cccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCce
Confidence 3334567899999999999999999987 6889999998654322 445667788
Q ss_pred EEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCC--eeecCCCCCCEEeCCCCceEEeecccc
Q 041438 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP--IVHWDISSKNVLLDLGYEAHVSDFRIA 626 (752)
Q Consensus 549 ~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~--ivH~DlKp~NIll~~~~~~kl~DfG~a 626 (752)
++||||+++|+|.+++........+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++
T Consensus 110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a 186 (309)
T 3p86_A 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186 (309)
T ss_dssp EEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC--
T ss_pred EEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCC
Confidence 99999999999999998765445589999999999999999999999 8 999999999999999999999999999
Q ss_pred eeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhh--hccCCCCC
Q 041438 627 KFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEI--LDSRLPYP 704 (752)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~ 704 (752)
+.............||+.|+|||++.+..++.++|||||||++|||++|+.||... ........+ .......+
T Consensus 187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~-----~~~~~~~~~~~~~~~~~~~ 261 (309)
T 3p86_A 187 RLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL-----NPAQVVAAVGFKCKRLEIP 261 (309)
T ss_dssp ---------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS-----CHHHHHHHHHHSCCCCCCC
T ss_pred ccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhcCCCCCCC
Confidence 86554433344568999999999999999999999999999999999999998521 111111222 12222222
Q ss_pred ChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcC
Q 041438 705 SLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYN 746 (752)
Q Consensus 705 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 746 (752)
...++++.+++.+||+.||++|||++|+++.|+.+...
T Consensus 262 ----~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 262 ----RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp ----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred ----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 34556789999999999999999999999999988643
No 52
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.9e-39 Score=347.00 Aligned_cols=225 Identities=23% Similarity=0.297 Sum_probs=187.7
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCC----C-----------------------CccccCCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLP----D-----------------------NFCSHPRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~-----------------------~~~~~~~~~~lV 551 (752)
.++|++.+.||+|+||.||+|+. .+|+.||+|++++... . +++...+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 47899999999999999999995 5799999998854210 0 345567889999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
|||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp EECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 99999999999987543 488899999999999999999999 999999999999999999999999999987544
Q ss_pred CCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHH
Q 041438 632 DSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNK 711 (752)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (752)
........+||+.|+|||++.+..++.++||||+||++|||++|+.||.. .........+.......+. ..
T Consensus 158 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~-----~~~~~~~~~i~~~~~~~p~----~~ 228 (337)
T 1o6l_A 158 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-----QDHERLFELILMEEIRFPR----TL 228 (337)
T ss_dssp TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHCCCCCCT----TS
T ss_pred CCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCC-----CCHHHHHHHHHcCCCCCCC----CC
Confidence 44445566899999999999999999999999999999999999999852 2222334444445555542 34
Q ss_pred HHHHHHHHHhccCcCCCCCC-----CHHHHHHH
Q 041438 712 FMSIMQVAFSCLDQNPVSRP-----TMKRFEVQ 739 (752)
Q Consensus 712 ~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 739 (752)
++++.++|.+||+.||++|| +++|+++|
T Consensus 229 s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 229 SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 56789999999999999999 89999876
No 53
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=5.3e-40 Score=353.53 Aligned_cols=226 Identities=24% Similarity=0.378 Sum_probs=182.7
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCC----------------------C------CccccCCceE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLP----------------------D------NFCSHPRQSF 549 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----------------------~------~~~~~~~~~~ 549 (752)
..++|++.+.||+|+||.||+|+. .+++.||||++++... . +++.+.+..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 357899999999999999999995 5689999998754210 0 3455678899
Q ss_pred EEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 550 lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+..
T Consensus 101 lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR---RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 9999999999999997643 488999999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhH
Q 041438 630 NLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQ 709 (752)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (752)
..........+||+.|+|||++.+..++.++||||+||++|||++|+.||.. ....+....+.......+.
T Consensus 175 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~-----~~~~~~~~~i~~~~~~~p~---- 245 (353)
T 3txo_A 175 ICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA-----ENEDDLFEAILNDEVVYPT---- 245 (353)
T ss_dssp CC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHCCCCCCT----
T ss_pred ccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCC-----CCHHHHHHHHHcCCCCCCC----
Confidence 4444445556899999999999988899999999999999999999999852 2233445556666665553
Q ss_pred HHHHHHHHHHHhccCcCCCCCCCH------HHHHHH
Q 041438 710 NKFMSIMQVAFSCLDQNPVSRPTM------KRFEVQ 739 (752)
Q Consensus 710 ~~~~~l~~li~~cl~~dP~~Rps~------~evl~~ 739 (752)
..+.++.+++.+||++||++||++ +|+++|
T Consensus 246 ~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 246 WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 245578899999999999999998 677654
No 54
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=8.8e-39 Score=340.20 Aligned_cols=239 Identities=26% Similarity=0.332 Sum_probs=192.5
Q ss_pred ccchHHHHHHhhcc----------cccceeeccCCceEEEEEEeC-CCcEEEEEccCCCCCC------------------
Q 041438 489 GKIVYEEIIRATND----------FDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSPLPD------------------ 539 (752)
Q Consensus 489 ~~~~~~~~~~~~~~----------y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------------------ 539 (752)
+.++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++......
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45678888877754 788899999999999999964 7999999988643322
Q ss_pred ------CccccCCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeC
Q 041438 540 ------NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLD 613 (752)
Q Consensus 540 ------~~~~~~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~ 613 (752)
+++...+..++||||+++++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~ 175 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLT 175 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEC
Confidence 3445667899999999999999998753 389999999999999999999999 999999999999999
Q ss_pred CCCceEEeecccceeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccch
Q 041438 614 LGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMN 693 (752)
Q Consensus 614 ~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~ 693 (752)
.++.+||+|||++..............||+.|+|||++.+..++.++|||||||++|||++|+.||... ......
T Consensus 176 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~-----~~~~~~ 250 (321)
T 2c30_A 176 LDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD-----SPVQAM 250 (321)
T ss_dssp TTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHH
T ss_pred CCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHH
Confidence 999999999999988765444445568999999999999999999999999999999999999998521 111122
Q ss_pred HhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 041438 694 IEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQS 740 (752)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 740 (752)
..+.....+.. ......++.+.+++.+||+.||++|||++|+++|-
T Consensus 251 ~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp 296 (321)
T 2c30_A 251 KRLRDSPPPKL-KNSHKVSPVLRDFLERMLVRDPQERATAQELLDHP 296 (321)
T ss_dssp HHHHHSSCCCC-TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred HHHhcCCCCCc-CccccCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 22222222211 11234566789999999999999999999999863
No 55
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.1e-39 Score=345.51 Aligned_cols=225 Identities=21% Similarity=0.347 Sum_probs=188.2
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccCCceEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV 551 (752)
..++|++.+.||+|+||.||+|+. .+|+.||||++...... +++...+..|+|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 467899999999999999999995 68999999988654321 445667889999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
|||+++|+|.+++...+ .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 93 ~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp ECCCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred EECCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 99999999999997543 388899999999999999999999 999999999999999999999999999987653
Q ss_pred CCCCcccccCCCCccCccccccCCCC-CccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHH
Q 041438 632 DSSNWSKLAGTHGNVAPELAYTMKVT-EKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQN 710 (752)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (752)
. ......+||+.|+|||++.+..+. +++||||+||++|||++|+.||+. .........+.......|. .
T Consensus 167 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~-----~~~~~~~~~i~~~~~~~p~----~ 236 (328)
T 3fe3_A 167 G-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-----QNLKELRERVLRGKYRIPF----Y 236 (328)
T ss_dssp S-CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHCCCCCCT----T
T ss_pred C-CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCC-----CCHHHHHHHHHhCCCCCCC----C
Confidence 3 334556899999999999888764 799999999999999999999862 2223344455555555543 2
Q ss_pred HHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 711 KFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 711 ~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.++++.+++.+||+.||++|||++|+++|
T Consensus 237 ~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 237 MSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp SCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 45678899999999999999999999976
No 56
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3.8e-39 Score=351.01 Aligned_cols=225 Identities=24% Similarity=0.341 Sum_probs=184.3
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC----------------------------CccccCCceE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD----------------------------NFCSHPRQSF 549 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----------------------------~~~~~~~~~~ 549 (752)
..++|++.+.||+|+||.||+|+. .+++.||+|++++.... +++...+..|
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 357899999999999999999995 56889999998653211 3345677899
Q ss_pred EEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 550 lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
+||||+++|+|..++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+..
T Consensus 130 lV~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEcCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 9999999999999997543 488999999999999999999999 9999999999999999999999999999875
Q ss_pred cCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhcccc----ccccchHhhhccCCCCCC
Q 041438 630 NLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS----SSSNMNIEILDSRLPYPS 705 (752)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~ 705 (752)
..........+||+.|+|||++.+..++.++||||+||++|||++|+.||+....... ........+.......|.
T Consensus 204 ~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~ 283 (396)
T 4dc2_A 204 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 283 (396)
T ss_dssp CCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCT
T ss_pred ccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCC
Confidence 4444455567899999999999999999999999999999999999999953211111 111233445555555553
Q ss_pred hhhHHHHHHHHHHHHhccCcCCCCCCCH
Q 041438 706 LDVQNKFMSIMQVAFSCLDQNPVSRPTM 733 (752)
Q Consensus 706 ~~~~~~~~~l~~li~~cl~~dP~~Rps~ 733 (752)
..+.++.++|.+||+.||++||++
T Consensus 284 ----~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 284 ----SLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ----TSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ----cCCHHHHHHHHHHhcCCHhHcCCC
Confidence 345678899999999999999996
No 57
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7.6e-39 Score=345.45 Aligned_cols=229 Identities=19% Similarity=0.248 Sum_probs=190.6
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC------------------------------CccccCCc
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD------------------------------NFCSHPRQ 547 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------------------------------~~~~~~~~ 547 (752)
..++|++.+.||+|+||.||+|+. .+|+.||+|+++..... +++.+...
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 357899999999999999999995 57999999988653221 34556678
Q ss_pred eEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCC----ceEEeec
Q 041438 548 SFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGY----EAHVSDF 623 (752)
Q Consensus 548 ~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~----~~kl~Df 623 (752)
.|+||||+++|+|.+++.... .+++..+..++.||+.||+|||+. ||+||||||+||+++.++ .+||+||
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 999999999999999997543 488999999999999999999999 999999999999998776 7999999
Q ss_pred ccceeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCC
Q 041438 624 RIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPY 703 (752)
Q Consensus 624 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 703 (752)
|+++..... ......+||+.|+|||++.+..++.++||||+||++|+|++|..||.. ....+....+......+
T Consensus 164 G~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~-----~~~~~~~~~i~~~~~~~ 237 (361)
T 2yab_A 164 GLAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG-----DTKQETLANITAVSYDF 237 (361)
T ss_dssp SSCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC-----SSHHHHHHHHHTTCCCC
T ss_pred CCceEcCCC-CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCC-----CCHHHHHHHHHhcCCCC
Confidence 999887543 233456899999999999998999999999999999999999999852 22233444555555555
Q ss_pred CChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 704 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
+.......+..+.++|.+||..||++|||++|+++|
T Consensus 238 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 238 DEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 544445566789999999999999999999999865
No 58
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=346.36 Aligned_cols=227 Identities=22% Similarity=0.302 Sum_probs=180.7
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------------CccccCCceEEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-------------------------NFCSHPRQSFIVY 552 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~lV~ 552 (752)
..++|++.+.||+|+||.||+|+. .+|+.||||++...... +++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 467899999999999999999994 68999999998654321 4456678899999
Q ss_pred EeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCC
Q 041438 553 EYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLD 632 (752)
Q Consensus 553 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~ 632 (752)
||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 88 E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 161 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD---RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN 161 (347)
T ss_dssp ECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC----
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCC
Confidence 9999999999996543 488999999999999999999999 9999999999999999999999999998865433
Q ss_pred CC-CcccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHH
Q 041438 633 SS-NWSKLAGTHGNVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQN 710 (752)
Q Consensus 633 ~~-~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (752)
.. .....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||+. .........+.......+. .
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~-----~~~~~~~~~i~~~~~~~p~----~ 232 (347)
T 3zgw_A 162 KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD-----DNVMALYKKIMRGKYDVPK----W 232 (347)
T ss_dssp ----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHTCCCCCT----T
T ss_pred CCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCC-----CCHHHHHHHHHcCCCCCCC----C
Confidence 22 2344589999999999988775 8999999999999999999999862 2223344455555555542 2
Q ss_pred HHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 041438 711 KFMSIMQVAFSCLDQNPVSRPTMKRFEVQS 740 (752)
Q Consensus 711 ~~~~l~~li~~cl~~dP~~Rps~~evl~~L 740 (752)
.++++.+++.+||+.||++|||++|+++|-
T Consensus 233 ~s~~~~~li~~~L~~dP~~Rps~~eil~hp 262 (347)
T 3zgw_A 233 LSPSSILLLQQMLQVDPKKRISMKNLLNHP 262 (347)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHTCH
T ss_pred CCHHHHHHHHHHcccCHhHCcCHHHHhcCc
Confidence 455688999999999999999999999763
No 59
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.3e-38 Score=352.73 Aligned_cols=315 Identities=19% Similarity=0.168 Sum_probs=279.6
Q ss_pred CCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcC
Q 041438 118 NNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSI 197 (752)
Q Consensus 118 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 197 (752)
+++++. +|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|.|++..|..|.++++|++|+|++|++++..
T Consensus 20 ~~~l~~-ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 96 (477)
T 2id5_A 20 RKRFVA-VPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 96 (477)
T ss_dssp SCCCSS-CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCC
T ss_pred CCCcCc-CCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccC
Confidence 334443 344443 58999999999999999999999999999999999999988999999999999999999999888
Q ss_pred CcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCC
Q 041438 198 PRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGE 277 (752)
Q Consensus 198 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 277 (752)
+..|.++++|++|+|++|++++..|..|.+ +++|+.|++++|.+++..+..|..
T Consensus 97 ~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~--------------------------l~~L~~L~l~~n~l~~~~~~~~~~ 150 (477)
T 2id5_A 97 LGVFTGLSNLTKLDISENKIVILLDYMFQD--------------------------LYNLKSLEVGDNDLVYISHRAFSG 150 (477)
T ss_dssp TTSSTTCTTCCEEECTTSCCCEECTTTTTT--------------------------CTTCCEEEECCTTCCEECTTSSTT
T ss_pred cccccCCCCCCEEECCCCccccCChhHccc--------------------------cccCCEEECCCCccceeChhhccC
Confidence 888999999999999999998776665544 456668888888888888889999
Q ss_pred CCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhcccccccEEE
Q 041438 278 SPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLN 357 (752)
Q Consensus 278 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 357 (752)
+++|++|+|++|.+++..+..|.++++|+.|+|++|.+.+..+..|..+++|++|++++|.+.+..+.......+|+.|+
T Consensus 151 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~ 230 (477)
T 2id5_A 151 LNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLS 230 (477)
T ss_dssp CTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEE
T ss_pred CCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEE
Confidence 99999999999999988888899999999999999999999999999999999999999998877777666777999999
Q ss_pred cCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCchhhhccCCCcEEEccCCcccC
Q 041438 358 LSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEG 437 (752)
Q Consensus 358 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 437 (752)
|++|++++..+..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..|..|..+++|+.|++++|++++
T Consensus 231 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 310 (477)
T 2id5_A 231 ITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTT 310 (477)
T ss_dssp EESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSC
T ss_pred CcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCce
Confidence 99999998777889999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCC-cccCCCCcccccCCCCCCC
Q 041438 438 HIPNS-TTFRDAPLEALQGNKGLCG 461 (752)
Q Consensus 438 ~~p~~-~~~~~~~~~~~~~n~~~c~ 461 (752)
..+.. ..+..+....+.+|++.|.
T Consensus 311 ~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 311 LEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp CCGGGBSCGGGCCEEECCSSCEECS
T ss_pred eCHhHcCCCcccCEEEccCCCccCc
Confidence 66543 2344566678899999886
No 60
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=8.5e-39 Score=354.15 Aligned_cols=231 Identities=19% Similarity=0.276 Sum_probs=192.5
Q ss_pred HhhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccCCceEE
Q 041438 498 RATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFI 550 (752)
Q Consensus 498 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~l 550 (752)
+..++|++.+.||+|+||.||+|+. .+|+.||+|++...... +++.+.+..|+
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 3467899999999999999999984 67999999988654321 45567788999
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeC---CCCceEEeecccce
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLD---LGYEAHVSDFRIAK 627 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~---~~~~~kl~DfG~a~ 627 (752)
||||+++|+|.+.+.... .+++..+..++.||+.||+|||+. ||+||||||+||+++ +++.+||+|||+++
T Consensus 88 v~E~~~gg~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 88 IFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp EECCCBCCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 999999999999987653 488999999999999999999999 999999999999998 46789999999998
Q ss_pred eccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChh
Q 041438 628 FLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLD 707 (752)
Q Consensus 628 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (752)
.............||+.|+|||++.+..++.++||||+||++|+|++|..||. ..........+.......+...
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~-----~~~~~~~~~~i~~~~~~~~~~~ 236 (444)
T 3soa_A 162 EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFW-----DEDQHRLYQQIKAGAYDFPSPE 236 (444)
T ss_dssp CCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCC-----CSSHHHHHHHHHHTCCCCCTTT
T ss_pred EecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCC-----CccHHHHHHHHHhCCCCCCccc
Confidence 87655544456789999999999999999999999999999999999999985 2223334455555555555444
Q ss_pred hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 708 VQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 708 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
....++++.+++.+||+.||++|||++|+++|
T Consensus 237 ~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 237 WDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 45667789999999999999999999999976
No 61
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.5e-37 Score=348.35 Aligned_cols=321 Identities=25% Similarity=0.371 Sum_probs=191.1
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeec
Q 041438 85 RVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHI 164 (752)
Q Consensus 85 ~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 164 (752)
.+..++++++.+.+..+ |..+++|++|+|++|+++++.+ |+++++|++|+|++|++++..+ +..+++|++|+|
T Consensus 69 ~L~~L~Ls~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 141 (466)
T 1o6v_A 69 NLTQINFSNNQLTDITP---LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLEL 141 (466)
T ss_dssp TCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEE
T ss_pred CCCEEECCCCccCCchh---hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEEC
Confidence 34455555555544321 5555555555555555555433 5555555555555555554422 555555555555
Q ss_pred cCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCC
Q 041438 165 SRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGA 244 (752)
Q Consensus 165 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 244 (752)
++|.+++. + .+..+++|++|+++ |.+.+..+ +.++++|++|++++|.+++. ..+.++++|+.|++++|++++.
T Consensus 142 ~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~ 214 (466)
T 1o6v_A 142 SSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDI 214 (466)
T ss_dssp EEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC
T ss_pred CCCccCCC-h-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccc
Confidence 55555532 2 35555555555554 33433322 56666666666666666543 2356666666666666666655
Q ss_pred cCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccC
Q 041438 245 IPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELG 324 (752)
Q Consensus 245 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 324 (752)
.| ++.+++|+.|++++|++++. ..+..+++|++|++++|.+++..| +..+++|+.|++++|++++..+ +.
T Consensus 215 ~~----~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~ 284 (466)
T 1o6v_A 215 TP----LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LA 284 (466)
T ss_dssp GG----GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GT
T ss_pred cc----ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--cc
Confidence 44 34556666666666666643 245566666666666666665544 6666666666666666665443 66
Q ss_pred CCcccceeeccccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceE
Q 041438 325 SLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKL 404 (752)
Q Consensus 325 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 404 (752)
.+++|++|+|++|++++..+ +..+++|+.|+|++|++++..| +..+++|++|++++|.+++. ..+..+++|+.|
T Consensus 285 ~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 358 (466)
T 1o6v_A 285 GLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWL 358 (466)
T ss_dssp TCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEE
T ss_pred CCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEE
Confidence 66666666666666666544 5666666666666666665544 56666666666666666654 345666666666
Q ss_pred EccCCcCCcCCchhhhccCCCcEEEccCCcccC
Q 041438 405 NLSYNNLSGLIPRCFEELHGLLHIDISYNKLEG 437 (752)
Q Consensus 405 ~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 437 (752)
++++|++++.+| +..+++|+.|++++|++++
T Consensus 359 ~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 359 SAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp ECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred eCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 666666666655 6666666666666666665
No 62
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.5e-38 Score=338.54 Aligned_cols=251 Identities=28% Similarity=0.433 Sum_probs=197.8
Q ss_pred chHHHHHHhhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC------------------------CccccCC
Q 041438 491 IVYEEIIRATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD------------------------NFCSHPR 546 (752)
Q Consensus 491 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------------~~~~~~~ 546 (752)
+++.++...+++|++.+.||+|+||.||+|+..+++.||||++...... +++.+.+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 4455666788999999999999999999999888999999987654322 4456678
Q ss_pred ceEEEEEeccCCChHHHhccCcc-ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeeccc
Q 041438 547 QSFIVYEYLESGSLDKILNNDAS-AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRI 625 (752)
Q Consensus 547 ~~~lV~E~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~ 625 (752)
..++||||+++|+|.+++..... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 89999999999999999976432 23589999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCC--CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhcccccccc----------ch
Q 041438 626 AKFLNLDSS--NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSN----------MN 693 (752)
Q Consensus 626 a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~----------~~ 693 (752)
++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||............ ..
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccH
Confidence 987543221 123346899999999999899999999999999999999999998532111100000 00
Q ss_pred HhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcC
Q 041438 694 IEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYN 746 (752)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 746 (752)
....+.... .......+..+.+++.+||+.||++|||++|++++|+.+...
T Consensus 266 ~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 266 EQIVDPNLA--DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CSSSSSSCT--TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHhcChhhc--cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 011111111 112356778899999999999999999999999999987543
No 63
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-39 Score=341.64 Aligned_cols=230 Identities=19% Similarity=0.256 Sum_probs=192.2
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-----------------------CccccCCceEEEEEec
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-----------------------NFCSHPRQSFIVYEYL 555 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~lV~E~~ 555 (752)
.++|++.+.||+|+||.||+|+. .+++.||+|.+...... +++.+.+..++||||+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 83 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence 57899999999999999999995 56899999987643211 4456678899999999
Q ss_pred cCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCC--CCceEEeecccceeccCCC
Q 041438 556 ESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDL--GYEAHVSDFRIAKFLNLDS 633 (752)
Q Consensus 556 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~--~~~~kl~DfG~a~~~~~~~ 633 (752)
++|+|.+++.... ..+++.+++.++.||+.||+|||+. ||+||||||+||+++. ++.+||+|||+++.....
T Consensus 84 ~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~- 157 (321)
T 1tki_A 84 SGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG- 157 (321)
T ss_dssp CCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT-
T ss_pred CCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC-
Confidence 9999999997543 3488999999999999999999999 9999999999999987 789999999999887533
Q ss_pred CCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHHHH
Q 041438 634 SNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKFM 713 (752)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (752)
.......||+.|+|||++.+..+++++||||+||++|+|++|+.||.. .........+.......+.......+.
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~-----~~~~~~~~~i~~~~~~~~~~~~~~~s~ 232 (321)
T 1tki_A 158 DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA-----ETNQQIIENIMNAEYTFDEEAFKEISI 232 (321)
T ss_dssp CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC-----SSHHHHHHHHHHTCCCCCHHHHTTSCH
T ss_pred CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcC-----CCHHHHHHHHHcCCCCCChhhhccCCH
Confidence 233446899999999999988899999999999999999999999852 222334455555666555444456677
Q ss_pred HHHHHHHhccCcCCCCCCCHHHHHHHH
Q 041438 714 SIMQVAFSCLDQNPVSRPTMKRFEVQS 740 (752)
Q Consensus 714 ~l~~li~~cl~~dP~~Rps~~evl~~L 740 (752)
++.+++.+||+.||++|||++|+++|-
T Consensus 233 ~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 233 EAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred HHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 899999999999999999999999864
No 64
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2e-39 Score=347.67 Aligned_cols=227 Identities=23% Similarity=0.337 Sum_probs=186.4
Q ss_pred HhhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCC----C------------------------CccccCCce
Q 041438 498 RATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLP----D------------------------NFCSHPRQS 548 (752)
Q Consensus 498 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~------------------------~~~~~~~~~ 548 (752)
...++|++.+.||+|+||.||+|+. .+|+.||||++++... . +++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 4578999999999999999999995 5789999998864210 0 345567889
Q ss_pred EEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeeccccee
Q 041438 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKF 628 (752)
Q Consensus 549 ~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~ 628 (752)
|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++.
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 99999999999999997543 488999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhh
Q 041438 629 LNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDV 708 (752)
Q Consensus 629 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (752)
...........+||+.|+|||++.+..++.++||||+||++|||++|+.||.. .........+.......+.
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~-----~~~~~~~~~i~~~~~~~p~--- 239 (345)
T 1xjd_A 168 NMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG-----QDEEELFHSIRMDNPFYPR--- 239 (345)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHCCCCCCT---
T ss_pred cccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCC-----CCHHHHHHHHHhCCCCCCc---
Confidence 54444444566899999999999999999999999999999999999999852 2222333444444444442
Q ss_pred HHHHHHHHHHHHhccCcCCCCCCCHH-HHHHH
Q 041438 709 QNKFMSIMQVAFSCLDQNPVSRPTMK-RFEVQ 739 (752)
Q Consensus 709 ~~~~~~l~~li~~cl~~dP~~Rps~~-evl~~ 739 (752)
..++++.++|.+||+.||++||++. |+++|
T Consensus 240 -~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 240 -WLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp -TSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred -ccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 3456788999999999999999998 66543
No 65
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.5e-39 Score=346.94 Aligned_cols=226 Identities=22% Similarity=0.357 Sum_probs=186.8
Q ss_pred hhcccccceeeccCCceEEEEEEeC-CCcEEEEEccCCCCC----C------------------------CccccCCceE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSPLP----D------------------------NFCSHPRQSF 549 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~------------------------~~~~~~~~~~ 549 (752)
..++|++.+.||+|+||.||+|+.. +++.||||++++... . .++...+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 4678999999999999999999964 588999998754210 0 3345667899
Q ss_pred EEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 550 lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
+||||+++|+|.+++...+ .+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 98 lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 9999999999999997543 488999999999999999999999 9999999999999999999999999999875
Q ss_pred cCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhH
Q 041438 630 NLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQ 709 (752)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (752)
..........+||+.|+|||++.+..++.++|||||||++|||++|+.||.. ....+....+.......+.
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~-----~~~~~~~~~i~~~~~~~p~---- 242 (353)
T 2i0e_A 172 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG-----EDEDELFQSIMEHNVAYPK---- 242 (353)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHCCCCCCT----
T ss_pred ccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC-----CCHHHHHHHHHhCCCCCCC----
Confidence 4444444556899999999999999999999999999999999999999852 2233344555555555552
Q ss_pred HHHHHHHHHHHhccCcCCCCCCC-----HHHHHHH
Q 041438 710 NKFMSIMQVAFSCLDQNPVSRPT-----MKRFEVQ 739 (752)
Q Consensus 710 ~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~ 739 (752)
..+.++.++|.+||+.||++||+ ++|+++|
T Consensus 243 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 243 SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 35567899999999999999995 5677655
No 66
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=9.2e-39 Score=336.74 Aligned_cols=236 Identities=25% Similarity=0.333 Sum_probs=182.2
Q ss_pred hhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-----------------------Cc----cccCCceEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-----------------------NF----CSHPRQSFIV 551 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------------~~----~~~~~~~~lV 551 (752)
..++|++.+.||+|+||.||+|+. +++.||||++...... ++ .......++|
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv 84 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLI 84 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEe
Confidence 357899999999999999999987 7899999987643211 11 1123457899
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHH--------hCCCCCeeecCCCCCCEEeCCCCceEEeec
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH--------NNCFPPIVHWDISSKNVLLDLGYEAHVSDF 623 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH--------~~~~~~ivH~DlKp~NIll~~~~~~kl~Df 623 (752)
|||+++|+|.++++.. .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+||
T Consensus 85 ~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 85 THYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp ECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCC
T ss_pred hhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeC
Confidence 9999999999999643 3899999999999999999999 87 9999999999999999999999999
Q ss_pred ccceeccCCCCC----cccccCCCCccCccccccC------CCCCccchhhHHHHHHHHHhC----------CCCcchhh
Q 041438 624 RIAKFLNLDSSN----WSKLAGTHGNVAPELAYTM------KVTEKCDVYSFGVLALEVIKG----------KHPRDFLF 683 (752)
Q Consensus 624 G~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~ksDIwSlGvil~elltg----------~~pf~~~~ 683 (752)
|+|+........ .....||+.|+|||++.+. .+++++|||||||++|||+|| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 999876543322 1234799999999998876 455799999999999999999 77774222
Q ss_pred ccccccccchHhhhcc---CCCCCCh-hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhh
Q 041438 684 EMSSSSSNMNIEILDS---RLPYPSL-DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQF 743 (752)
Q Consensus 684 ~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 743 (752)
...... ......... ....+.. .....++++.+++.+||+.||++|||++|+++.|+++
T Consensus 238 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 238 PNDPSF-EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CSSCCH-HHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCcch-hhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 111111 111111111 1112211 1244677899999999999999999999999999986
No 67
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=9.9e-39 Score=345.90 Aligned_cols=227 Identities=25% Similarity=0.267 Sum_probs=186.2
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC----------------------------CccccCCceEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD----------------------------NFCSHPRQSFI 550 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----------------------------~~~~~~~~~~l 550 (752)
.++|++.+.||+|+||.||+|+. .+++.||||++++.... +++...+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 57899999999999999999995 46889999987543210 23455678899
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++++||+|||+++...
T Consensus 117 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 999999999999997543 478899999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHH
Q 041438 631 LDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQN 710 (752)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (752)
.........+||+.|+|||++.+..++.++|||||||++|||++|+.||.. ....+....+.......+. .
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~-----~~~~~~~~~i~~~~~~~~~----~ 261 (373)
T 2r5t_A 191 EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS-----RNTAEMYDNILNKPLQLKP----N 261 (373)
T ss_dssp CCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC-----SBHHHHHHHHHHSCCCCCS----S
T ss_pred cCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCC-----CCHHHHHHHHHhcccCCCC----C
Confidence 444445567899999999999999999999999999999999999999852 2223344455555554442 3
Q ss_pred HHHHHHHHHHhccCcCCCCCCCHHHHHHHHh
Q 041438 711 KFMSIMQVAFSCLDQNPVSRPTMKRFEVQSK 741 (752)
Q Consensus 711 ~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 741 (752)
.+.++.++|.+||+.||++||++.+.++.++
T Consensus 262 ~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~ 292 (373)
T 2r5t_A 262 ITNSARHLLEGLLQKDRTKRLGAKDDFMEIK 292 (373)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTTTTTHHHHH
T ss_pred CCHHHHHHHHHHcccCHHhCCCCCCCHHHHh
Confidence 4567889999999999999999865444443
No 68
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=335.88 Aligned_cols=234 Identities=24% Similarity=0.375 Sum_probs=186.0
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC------------------------CccccCCceEEEEEe
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD------------------------NFCSHPRQSFIVYEY 554 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------------------------~~~~~~~~~~lV~E~ 554 (752)
.++|++.+.||+|+||.||+|+. .+++.||+|++...... +++.+.+..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 57899999999999999999995 57999999987542211 445667889999999
Q ss_pred ccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCCC
Q 041438 555 LESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSS 634 (752)
Q Consensus 555 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~ 634 (752)
+++|+|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 89 ~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 163 (310)
T 3s95_A 89 IKGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163 (310)
T ss_dssp CTTCBHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred cCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence 99999999998643 3488999999999999999999999 999999999999999999999999999987643322
Q ss_pred Cc--------------ccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccC
Q 041438 635 NW--------------SKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSR 700 (752)
Q Consensus 635 ~~--------------~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 700 (752)
.. ....||+.|+|||++.+..++.++|||||||++|||++|..||.....................
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T 3s95_A 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY 243 (310)
T ss_dssp ----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT
T ss_pred cccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc
Confidence 11 1357999999999999999999999999999999999999998532221111111222222222
Q ss_pred CCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 701 LPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 701 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
.+ ..+++.+.+++.+||+.||++|||++|+++.|+++.
T Consensus 244 ~~------~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 244 CP------PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp CC------TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CC------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11 123346889999999999999999999999999875
No 69
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.2e-38 Score=342.57 Aligned_cols=233 Identities=21% Similarity=0.340 Sum_probs=187.4
Q ss_pred hcccccceeeccCCceEEEEEEe--------CCCcEEEEEccCCCCCC--------------------------CccccC
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV--------PSGEIFAVKKFHSPLPD--------------------------NFCSHP 545 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~--------------------------~~~~~~ 545 (752)
.++|++.+.||+|+||.||+|+. .++..||||+++..... +++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 47899999999999999999984 24567999998654221 345567
Q ss_pred CceEEEEEeccCCChHHHhccCcc-------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEe
Q 041438 546 RQSFIVYEYLESGSLDKILNNDAS-------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLL 612 (752)
Q Consensus 546 ~~~~lV~E~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll 612 (752)
+..|+||||+++|+|.+++..... ...+++.+++.++.||+.||+|||++ +|+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 789999999999999999986432 13478999999999999999999999 99999999999999
Q ss_pred CCCCceEEeecccceeccCCCC--CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhcccccc
Q 041438 613 DLGYEAHVSDFRIAKFLNLDSS--NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSS 689 (752)
Q Consensus 613 ~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~ 689 (752)
+.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||... ..
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~-----~~ 311 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-----PV 311 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----CG
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC-----CH
Confidence 9999999999999987654322 1233467889999999999999999999999999999999 99998521 11
Q ss_pred ccchHhhhccC-CCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 690 SNMNIEILDSR-LPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 690 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
.+....+.... ...+ ..++.++.+++.+||+.||++||+++|++++|+++.
T Consensus 312 ~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 312 EELFKLLKEGHRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp GGHHHHHHTTCCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 22222222222 1222 345567899999999999999999999999999875
No 70
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.2e-38 Score=328.14 Aligned_cols=237 Identities=24% Similarity=0.374 Sum_probs=189.4
Q ss_pred hhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-----------------------CccccCCceEEEEEec
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-----------------------NFCSHPRQSFIVYEYL 555 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~lV~E~~ 555 (752)
..++|++.+.||+|+||.||+|+..++..||+|+++..... +++.+....++||||+
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 35789999999999999999999888889999998754322 4456677889999999
Q ss_pred cCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCCCC
Q 041438 556 ESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN 635 (752)
Q Consensus 556 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 635 (752)
++++|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.........
T Consensus 86 ~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 160 (268)
T 3sxs_A 86 SNGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV 160 (268)
T ss_dssp TTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE
T ss_pred CCCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhh
Confidence 9999999997643 3488999999999999999999999 9999999999999999999999999999876543211
Q ss_pred -cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhccCCCCCChhhHHHHH
Q 041438 636 -WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKFM 713 (752)
Q Consensus 636 -~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (752)
.....+|+.|+|||++.+..++.++||||+|+++|||++ |+.||+.. ........+......... ...++
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~---~~~~~ 232 (268)
T 3sxs_A 161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY-----TNSEVVLKVSQGHRLYRP---HLASD 232 (268)
T ss_dssp ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTS-----CHHHHHHHHHTTCCCCCC---TTSCH
T ss_pred cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCcccc-----ChHHHHHHHHcCCCCCCC---CcChH
Confidence 122356778999999998889999999999999999999 99998521 111222222222221111 22345
Q ss_pred HHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcCCC
Q 041438 714 SIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPD 748 (752)
Q Consensus 714 ~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 748 (752)
.+.+++.+||+.||++|||++|++++|+++....+
T Consensus 233 ~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~k 267 (268)
T 3sxs_A 233 TIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKDK 267 (268)
T ss_dssp HHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC---
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhccC
Confidence 78899999999999999999999999999865443
No 71
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=6.9e-39 Score=343.62 Aligned_cols=234 Identities=20% Similarity=0.224 Sum_probs=191.0
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC---------------------CccccCCceEEEEEecc
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD---------------------NFCSHPRQSFIVYEYLE 556 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------------------~~~~~~~~~~lV~E~~~ 556 (752)
..++|++.+.||+|+||.||+|+. .+++.||||++++.... +++.+.+..|+||||++
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~ 99 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMK 99 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCC
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCC
Confidence 467899999999999999999995 57899999998654322 44566788999999999
Q ss_pred CCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCC----CceEEeecccceeccCC
Q 041438 557 SGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLG----YEAHVSDFRIAKFLNLD 632 (752)
Q Consensus 557 ~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~----~~~kl~DfG~a~~~~~~ 632 (752)
+|+|.+++.... .+++..+..++.||+.||+|||+. ||+||||||+||++.++ +.+||+|||+++.....
T Consensus 100 gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~ 173 (342)
T 2qr7_A 100 GGELLDKILRQK---FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE 173 (342)
T ss_dssp SCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCT
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCC
Confidence 999999987543 488999999999999999999999 99999999999998533 35999999999987655
Q ss_pred CCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHHH
Q 041438 633 SSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKF 712 (752)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (752)
.......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .....+....+.......+...+...+
T Consensus 174 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~s 251 (342)
T 2qr7_A 174 NGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP--DDTPEEILARIGSGKFSLSGGYWNSVS 251 (342)
T ss_dssp TCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSST--TSCHHHHHHHHHHCCCCCCSTTTTTSC
T ss_pred CCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCC--cCCHHHHHHHHccCCcccCccccccCC
Confidence 444555689999999999988889999999999999999999999985211 112223344455555554433334566
Q ss_pred HHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 041438 713 MSIMQVAFSCLDQNPVSRPTMKRFEVQS 740 (752)
Q Consensus 713 ~~l~~li~~cl~~dP~~Rps~~evl~~L 740 (752)
+++.+++.+||+.||++|||++|+++|-
T Consensus 252 ~~~~~li~~~L~~dP~~R~t~~~il~hp 279 (342)
T 2qr7_A 252 DTAKDLVSKMLHVDPHQRLTAALVLRHP 279 (342)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhcCC
Confidence 7899999999999999999999999763
No 72
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.5e-38 Score=341.40 Aligned_cols=230 Identities=24% Similarity=0.333 Sum_probs=185.7
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC----------------------------CccccCCceEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD----------------------------NFCSHPRQSFI 550 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----------------------------~~~~~~~~~~l 550 (752)
.++|++.+.||+|+||.||+|+. .+++.||+|++++.... +++......|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 46899999999999999999995 56899999998654211 34456678999
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++++||+|||+++...
T Consensus 88 v~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp EECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 999999999999997543 488999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccc----cccccchHhhhccCCCCCCh
Q 041438 631 LDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMS----SSSSNMNIEILDSRLPYPSL 706 (752)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 706 (752)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||....... .........+.......+.
T Consensus 162 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~- 240 (345)
T 3a8x_A 162 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR- 240 (345)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCT-
T ss_pred CCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCC-
Confidence 44444555689999999999999999999999999999999999999996321111 1111223344444555442
Q ss_pred hhHHHHHHHHHHHHhccCcCCCCCCCH------HHHHHH
Q 041438 707 DVQNKFMSIMQVAFSCLDQNPVSRPTM------KRFEVQ 739 (752)
Q Consensus 707 ~~~~~~~~l~~li~~cl~~dP~~Rps~------~evl~~ 739 (752)
..+.++.+++.+||+.||++||++ +|+++|
T Consensus 241 ---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 241 ---SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp ---TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred ---CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 345678899999999999999996 566544
No 73
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.2e-38 Score=333.52 Aligned_cols=240 Identities=20% Similarity=0.280 Sum_probs=188.2
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------------Ccccc--CCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-------------------------NFCSH--PRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~--~~~~~lV 551 (752)
.++|++.+.||+|+||.||+|+. .+++.||||+++..... +++.. ....++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 46799999999999999999995 46999999998643211 22222 3377999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEe----CCCCceEEeecccce
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLL----DLGYEAHVSDFRIAK 627 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll----~~~~~~kl~DfG~a~ 627 (752)
|||+++++|.+++........+++.+++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999999998765444589999999999999999999999 99999999999999 778889999999998
Q ss_pred eccCCCCCcccccCCCCccCccccc--------cCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhcc
Q 041438 628 FLNLDSSNWSKLAGTHGNVAPELAY--------TMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDS 699 (752)
Q Consensus 628 ~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 699 (752)
...... ......||+.|+|||++. +..++.++|||||||++|||++|+.||....... ........+...
T Consensus 165 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~ 242 (319)
T 4euu_A 165 ELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR-RNKEVMYKIITG 242 (319)
T ss_dssp ECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG-GCHHHHHHHHHH
T ss_pred ecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc-hhHHHHHHHhcC
Confidence 875433 334457999999999876 5678999999999999999999999995321111 111112222211
Q ss_pred ---------------------CCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 700 ---------------------RLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 700 ---------------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
..+............+.+++.+||+.||++|||++|+++|..+..
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 112112223567778999999999999999999999999998754
No 74
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.6e-38 Score=336.23 Aligned_cols=228 Identities=18% Similarity=0.291 Sum_probs=187.0
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC------------------------------CccccCCce
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD------------------------------NFCSHPRQS 548 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------------------------------~~~~~~~~~ 548 (752)
.++|++.+.||+|+||.||+|+. .+|+.||+|+++..... +++......
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 46799999999999999999995 47999999988643211 345567789
Q ss_pred EEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCC----ceEEeecc
Q 041438 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGY----EAHVSDFR 624 (752)
Q Consensus 549 ~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~----~~kl~DfG 624 (752)
++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 99999999999999997543 488999999999999999999999 999999999999999877 79999999
Q ss_pred cceeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCC
Q 041438 625 IAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYP 704 (752)
Q Consensus 625 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (752)
+++...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.. .........+.......+
T Consensus 164 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~-----~~~~~~~~~~~~~~~~~~ 237 (326)
T 2y0a_A 164 LAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG-----DTKQETLANVSAVNYEFE 237 (326)
T ss_dssp TCEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC-----SSHHHHHHHHHHTCCCCC
T ss_pred CCeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCC-----CCHHHHHHHHHhcCCCcC
Confidence 998875332 33445899999999999989999999999999999999999999852 122223333334444444
Q ss_pred ChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 705 SLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 705 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.......+..+.+++.+||+.||++|||++|+++|
T Consensus 238 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 33334556778999999999999999999999975
No 75
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.3e-38 Score=342.52 Aligned_cols=229 Identities=21% Similarity=0.300 Sum_probs=190.6
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccCCceEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV 551 (752)
..++|++.+.||+|+||.||+|+. .+|+.||+|++...... +++.+.+..|+|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 357899999999999999999985 57899999998654321 345667889999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCC---CceEEeeccccee
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLG---YEAHVSDFRIAKF 628 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~---~~~kl~DfG~a~~ 628 (752)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.+ +.+||+|||++..
T Consensus 107 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp ECCCCSCBHHHHHTTCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred EecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 99999999999987543 488999999999999999999999 99999999999999865 4599999999987
Q ss_pred ccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhh
Q 041438 629 LNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDV 708 (752)
Q Consensus 629 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (752)
.... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||.. .........+.......+...+
T Consensus 181 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~-----~~~~~~~~~i~~~~~~~~~~~~ 254 (362)
T 2bdw_A 181 VNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD-----EDQHRLYAQIKAGAYDYPSPEW 254 (362)
T ss_dssp CTTC-CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHTCCCCCTTGG
T ss_pred ecCC-cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCC-----CCHHHHHHHHHhCCCCCCcccc
Confidence 6533 233456899999999999998999999999999999999999999852 2223344445555555555455
Q ss_pred HHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 709 QNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 709 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
...++++.++|.+||+.||++|||++|+++|
T Consensus 255 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 255 DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 6677889999999999999999999999876
No 76
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.5e-37 Score=326.90 Aligned_cols=249 Identities=30% Similarity=0.460 Sum_probs=197.8
Q ss_pred ccchHHHHHHhhcccccc------eeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-----------------------
Q 041438 489 GKIVYEEIIRATNDFDAK------HCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD----------------------- 539 (752)
Q Consensus 489 ~~~~~~~~~~~~~~y~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------- 539 (752)
..++++++..++++|... +.||+|+||.||+|+. +++.||||++......
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 357899999999999877 8999999999999986 6889999988643210
Q ss_pred -----CccccCCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCC
Q 041438 540 -----NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDL 614 (752)
Q Consensus 540 -----~~~~~~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~ 614 (752)
+++.+.+..++||||+++++|.+++........+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcC
Confidence 34556678899999999999999997654445689999999999999999999999 9999999999999999
Q ss_pred CCceEEeecccceeccCCCCC--cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhcccccc---
Q 041438 615 GYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS--- 689 (752)
Q Consensus 615 ~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~--- 689 (752)
++.+||+|||+++........ .....||+.|+|||.+.+ .++.++|||||||++|+|++|+.||..........
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999999876543222 223478999999998765 58899999999999999999999986322111000
Q ss_pred ------ccchHhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 690 ------SNMNIEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 690 ------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
........+..... .....+..+.+++.+||+.||++|||++|++++|+++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKMND---ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHTTSCCHHHHSCSSCSC---CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHhhhhhhhhhhhccccccc---cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 00111222222221 124567789999999999999999999999999999754
No 77
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=4.5e-38 Score=333.27 Aligned_cols=233 Identities=19% Similarity=0.262 Sum_probs=179.0
Q ss_pred hhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC--------------------------CccccCCceEEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIVY 552 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV~ 552 (752)
..++|++.+.||+|+||.||+|+..+|+.||+|++...... +++...+..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 35789999999999999999999888999999988643221 3455677899999
Q ss_pred EeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCC
Q 041438 553 EYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLD 632 (752)
Q Consensus 553 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~ 632 (752)
||+++ ++.+++.... ..+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++.....
T Consensus 99 e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 99 EFMEK-DLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp ECCSE-EHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred cCCCC-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 99986 8888886543 3488999999999999999999999 9999999999999999999999999999987655
Q ss_pred CCCcccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhcc------------
Q 041438 633 SSNWSKLAGTHGNVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDS------------ 699 (752)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~------------ 699 (752)
........||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ ..........
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~ 250 (311)
T 3niz_A 173 VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ--LPKIFSILGTPNPREWPQVQEL 250 (311)
T ss_dssp CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH--HHHHHHHHCCCCTTTSGGGTTS
T ss_pred cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHHCCCChHHhhhhhcc
Confidence 444555689999999999876 5689999999999999999999999853211000 0000000000
Q ss_pred ------CCCC-CC----hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 700 ------RLPY-PS----LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 700 ------~~~~-~~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.... .. ......++++.+++.+||+.||++|||++|+++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred chhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0000 00 0012234578899999999999999999999975
No 78
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=6.2e-37 Score=343.37 Aligned_cols=344 Identities=25% Similarity=0.349 Sum_probs=299.3
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceee
Q 041438 84 GRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILH 163 (752)
Q Consensus 84 ~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 163 (752)
.++..+++.++++.. ++ .+..+++|++|+|++|+++++.| |.++++|++|+|++|++++..+ +.++++|++|+
T Consensus 46 ~~l~~L~l~~~~i~~-l~--~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID--GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HTCCEEECCSSCCCC-CT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred ccccEEecCCCCCcc-Cc--chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 356777887777654 22 47889999999999999998755 9999999999999999997765 99999999999
Q ss_pred ccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCC
Q 041438 164 ISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNG 243 (752)
Q Consensus 164 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 243 (752)
|++|.+++..+ +.++++|++|+|++|++++. + .+.++++|++|+++ |.+.+..+ +.++++|+.|++++|++++
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSD 191 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCCC
Confidence 99999997644 99999999999999999974 3 48999999999997 56665443 8999999999999999987
Q ss_pred CcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCccc
Q 041438 244 AIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGEL 323 (752)
Q Consensus 244 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 323 (752)
.. .+..+++|++|++++|.+++..| ++.+++|++|++++|.+++. ..+..+++|+.|++++|.+++..+ +
T Consensus 192 ~~----~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~ 261 (466)
T 1o6v_A 192 IS----VLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--L 261 (466)
T ss_dssp CG----GGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--G
T ss_pred Ch----hhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--h
Confidence 53 25788999999999999998776 77899999999999999864 468899999999999999997765 8
Q ss_pred CCCcccceeeccccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccce
Q 041438 324 GSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEK 403 (752)
Q Consensus 324 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 403 (752)
..+++|++|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..| +..+++|+.
T Consensus 262 ~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~ 335 (466)
T 1o6v_A 262 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQR 335 (466)
T ss_dssp TTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCE
T ss_pred hcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCE
Confidence 999999999999999999766 8899999999999999987655 8899999999999999998876 789999999
Q ss_pred EEccCCcCCcCCchhhhccCCCcEEEccCCcccCcCCCCcccCCCCcccccCCCCCC
Q 041438 404 LNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPNSTTFRDAPLEALQGNKGLC 460 (752)
Q Consensus 404 L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c 460 (752)
|++++|++++. ..+..+++|+.|++++|++++..| ...+..+....+.+|++..
T Consensus 336 L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 336 LFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp EECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG-GTTCTTCCEEECCCEEEEC
T ss_pred eECCCCccCCc--hhhccCCCCCEEeCCCCccCccch-hhcCCCCCEEeccCCcccC
Confidence 99999999987 478999999999999999999887 4455555566677776544
No 79
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.2e-38 Score=343.62 Aligned_cols=231 Identities=20% Similarity=0.211 Sum_probs=188.2
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCC------CC-----------------------CccccCCceE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPL------PD-----------------------NFCSHPRQSF 549 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~------~~-----------------------~~~~~~~~~~ 549 (752)
.++|++.+.||+|+||.||+|+. .+++.||||+++... .. +++...+..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46799999999999999999985 579999999874211 00 3455678899
Q ss_pred EEEEeccCCChHHHhccCc-cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCc---eEEeeccc
Q 041438 550 IVYEYLESGSLDKILNNDA-SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYE---AHVSDFRI 625 (752)
Q Consensus 550 lV~E~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~---~kl~DfG~ 625 (752)
+|||||++|+|.+.+.... ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999988876532 223488999999999999999999999 9999999999999986554 99999999
Q ss_pred ceeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCC
Q 041438 626 AKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPS 705 (752)
Q Consensus 626 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (752)
++............+||+.|+|||++.+..++.++||||+||++|||++|+.||... .......+.......+.
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~------~~~~~~~i~~~~~~~~~ 253 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT------KERLFEGIIKGKYKMNP 253 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS------HHHHHHHHHHTCCCCCH
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc------HHHHHHHHHcCCCCCCc
Confidence 998765444445568999999999999999999999999999999999999998521 22334444455554443
Q ss_pred hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 706 LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 706 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
......+.++.++|.+||+.||++|||+.|+++|
T Consensus 254 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 254 RQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 3334566789999999999999999999999875
No 80
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-38 Score=335.63 Aligned_cols=222 Identities=24% Similarity=0.365 Sum_probs=185.6
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCC----C-----------------------CccccCCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLP----D-----------------------NFCSHPRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~-----------------------~~~~~~~~~~lV 551 (752)
.++|++.+.||+|+||.||+|+. .+|+.||+|++++... . +++.+....|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 47899999999999999999995 5799999998754210 0 345567889999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
|||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp ECCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred EeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 99999999999997643 488899999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHH
Q 041438 632 DSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNK 711 (752)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (752)
.....+||+.|+|||++.+..++.++||||+||++|||++|+.||.. .........+.......+. ..
T Consensus 159 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~-----~~~~~~~~~i~~~~~~~p~----~~ 226 (318)
T 1fot_A 159 ---VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD-----SNTMKTYEKILNAELRFPP----FF 226 (318)
T ss_dssp ---CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC-----SSHHHHHHHHHHCCCCCCT----TS
T ss_pred ---ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCC-----CCHHHHHHHHHhCCCCCCC----CC
Confidence 22345899999999999999999999999999999999999999852 2223344455555555542 34
Q ss_pred HHHHHHHHHhccCcCCCCCC-----CHHHHHHH
Q 041438 712 FMSIMQVAFSCLDQNPVSRP-----TMKRFEVQ 739 (752)
Q Consensus 712 ~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 739 (752)
+.++.+++.+||+.||++|| +++|+++|
T Consensus 227 ~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 227 NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 56788999999999999999 88888865
No 81
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=4.1e-38 Score=331.28 Aligned_cols=237 Identities=15% Similarity=0.155 Sum_probs=187.0
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-----------------------CccccCCceEEEEEec
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-----------------------NFCSHPRQSFIVYEYL 555 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~lV~E~~ 555 (752)
.++|++.+.||+|+||.||+|+. .+++.||||++...... +++......++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 88 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 88 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence 46799999999999999999994 68999999987543221 3445567889999999
Q ss_pred cCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCc-----eEEeecccceecc
Q 041438 556 ESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYE-----AHVSDFRIAKFLN 630 (752)
Q Consensus 556 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~-----~kl~DfG~a~~~~ 630 (752)
+++|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++. +||+|||+++...
T Consensus 89 -~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 89 -GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp -CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred -CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 889999997643 3488999999999999999999999 9999999999999987776 9999999999876
Q ss_pred CCCCC-------cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCC
Q 041438 631 LDSSN-------WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPY 703 (752)
Q Consensus 631 ~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 703 (752)
..... .....||+.|+|||++.+..+++++|||||||++|||++|+.||..... .........+.......
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~ 240 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA--ATNKQKYERIGEKKQST 240 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCS--CCHHHHHHHHHHHHHHS
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhc--cccHHHHHHHHhhccCc
Confidence 43321 2345799999999999999999999999999999999999999863211 01111111221111111
Q ss_pred CC-hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 704 PS-LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 704 ~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
+. ......++++.+++.+||+.||++||+++++++.|+++.
T Consensus 241 ~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~ 282 (298)
T 1csn_A 241 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 282 (298)
T ss_dssp CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred cHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence 11 011234568999999999999999999999999999875
No 82
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.8e-38 Score=327.50 Aligned_cols=233 Identities=23% Similarity=0.338 Sum_probs=188.4
Q ss_pred hcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-----------------------CccccCCceEEEEEecc
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-----------------------NFCSHPRQSFIVYEYLE 556 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~lV~E~~~ 556 (752)
.++|++.+.||+|+||.||+|+..+++.||+|++...... +++.+....++||||++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 4689999999999999999999888999999998764322 44556778999999999
Q ss_pred CCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCC-CC
Q 041438 557 SGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS-SN 635 (752)
Q Consensus 557 ~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~-~~ 635 (752)
+++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 89 ~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 163 (269)
T 4hcu_A 89 HGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 163 (269)
T ss_dssp TCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred CCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccccccc
Confidence 999999997543 3488999999999999999999999 99999999999999999999999999998654321 11
Q ss_pred cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhccCCCCCChhhHHHHHH
Q 041438 636 WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKFMS 714 (752)
Q Consensus 636 ~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (752)
.....+|+.|+|||++.+..+++++||||+||++|||++ |+.||... ........+......... ...++.
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~---~~~~~~ 235 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-----SNSEVVEDISTGFRLYKP---RLASTH 235 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHHHTTCCCCCC---TTSCHH
T ss_pred ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCC-----CHHHHHHHHhcCccCCCC---CcCCHH
Confidence 223456788999999998999999999999999999999 99998521 112222222222111111 234567
Q ss_pred HHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 715 IMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 715 l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
+.+++.+||+.||++|||++|++++|+++..
T Consensus 236 ~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 236 VYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 8899999999999999999999999998754
No 83
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=5.1e-38 Score=334.96 Aligned_cols=235 Identities=25% Similarity=0.411 Sum_probs=185.9
Q ss_pred hcccccceeeccCCceEEEEEEeC----CCcEEEEEccCCCCCC-------------------------CccccCCceEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVP----SGEIFAVKKFHSPLPD-------------------------NFCSHPRQSFI 550 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~l 550 (752)
.++|++.+.||+|+||.||+|+.. .+..||||+++..... +++.+.+..|+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 468999999999999999999963 3456999998754221 34556678899
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
||||+++|+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 128 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 999999999999996543 3488999999999999999999999 99999999999999999999999999999875
Q ss_pred CCCCCc---ccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhcc-CCCCCC
Q 041438 631 LDSSNW---SKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDS-RLPYPS 705 (752)
Q Consensus 631 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~ 705 (752)
...... ....+|+.|+|||++.+..++.++|||||||++|||++ |+.||... ........+... ..+.+
T Consensus 203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~- 276 (325)
T 3kul_A 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM-----TNRDVISSVEEGYRLPAP- 276 (325)
T ss_dssp ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS-----CHHHHHHHHHTTCCCCCC-
T ss_pred cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC-----CHHHHHHHHHcCCCCCCC-
Confidence 433221 22356778999999998899999999999999999999 99998521 111222222222 22222
Q ss_pred hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcCCC
Q 041438 706 LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPD 748 (752)
Q Consensus 706 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 748 (752)
..++..+.+++.+||+.||++|||++|+++.|+++...+.
T Consensus 277 ---~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 277 ---MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp ---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred ---CCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 3455678999999999999999999999999999876553
No 84
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=5.4e-38 Score=329.89 Aligned_cols=239 Identities=18% Similarity=0.225 Sum_probs=183.9
Q ss_pred HhhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-----------------------CccccCCceEEEEE
Q 041438 498 RATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-----------------------NFCSHPRQSFIVYE 553 (752)
Q Consensus 498 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~lV~E 553 (752)
...++|++.+.||+|+||.||+|+. .+++.||||++...... .+.......++|||
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 3467899999999999999999994 68999999975433221 22345677899999
Q ss_pred eccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEe---CCCCceEEeecccceecc
Q 041438 554 YLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLL---DLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 554 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll---~~~~~~kl~DfG~a~~~~ 630 (752)
|+ +++|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||++ ++++.+||+|||+++...
T Consensus 86 ~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp CC-CCBHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred cc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 99 889999997533 3489999999999999999999999 99999999999999 788999999999998875
Q ss_pred CCCC-------CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCC
Q 041438 631 LDSS-------NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPY 703 (752)
Q Consensus 631 ~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 703 (752)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........+.......
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~ 237 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA--TKRQKYERISEKKMST 237 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS--SSSSHHHHHHHHHHHS
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchh--hhhhhhhhhhcccccc
Confidence 4332 123457999999999999999999999999999999999999999632211 1111222222222222
Q ss_pred CCh-hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 704 PSL-DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 704 ~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
+.. .....++++.+++.+||+.||++|||++|+++.|+++.
T Consensus 238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~ 279 (296)
T 4hgt_A 238 PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred hhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 211 11233567999999999999999999999999998875
No 85
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=4.7e-39 Score=352.20 Aligned_cols=234 Identities=21% Similarity=0.325 Sum_probs=187.7
Q ss_pred HHHHHHhhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCC------CC---------------------Ccccc
Q 041438 493 YEEIIRATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPL------PD---------------------NFCSH 544 (752)
Q Consensus 493 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~------~~---------------------~~~~~ 544 (752)
++++....++|++.+.||+|+||.||+|+. .+++.||+|++++.. .. +++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 345556788999999999999999999995 468999999875311 00 44567
Q ss_pred CCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecc
Q 041438 545 PRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFR 624 (752)
Q Consensus 545 ~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG 624 (752)
.+..|+||||+++|+|.+++... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++++||+|||
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG 213 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG 213 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccc
Confidence 78899999999999999999754 388899999999999999999999 99999999999999999999999999
Q ss_pred cceeccCCCC-CcccccCCCCccCccccccCC----CCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhcc
Q 041438 625 IAKFLNLDSS-NWSKLAGTHGNVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDS 699 (752)
Q Consensus 625 ~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~----~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 699 (752)
+|+....... .....+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.. .........+...
T Consensus 214 ~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~-----~~~~~~~~~i~~~ 288 (410)
T 3v8s_A 214 TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA-----DSLVGTYSKIMNH 288 (410)
T ss_dssp TCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC-----SSHHHHHHHHHTH
T ss_pred eeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC-----CChhhHHHHHHhc
Confidence 9987654322 223468999999999988665 78999999999999999999999852 2222233333332
Q ss_pred C--CCCCChhhHHHHHHHHHHHHhccCcCCCC--CCCHHHHHHHH
Q 041438 700 R--LPYPSLDVQNKFMSIMQVAFSCLDQNPVS--RPTMKRFEVQS 740 (752)
Q Consensus 700 ~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~L 740 (752)
. ...+. ....++++.++|.+||..+|++ ||+++|+++|-
T Consensus 289 ~~~~~~p~--~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp 331 (410)
T 3v8s_A 289 KNSLTFPD--DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 331 (410)
T ss_dssp HHHCCCCT--TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSG
T ss_pred cccccCCC--cccccHHHHHHHHHHccChhhhCCCCCHHHHhcCc
Confidence 1 22331 1235567899999999999988 99999999874
No 86
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.5e-38 Score=331.30 Aligned_cols=236 Identities=22% Similarity=0.324 Sum_probs=183.4
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC---------------------------CccccCCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD---------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------------------------~~~~~~~~~~lV 551 (752)
.++|++.+.||+|+||.||+|+. .+++.||+|++...... +++...+..|+|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 46899999999999999999994 57899999987543221 345567789999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
|||+++++|.+++...+ .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 90 ~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp EECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred EeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 99999999999997543 488999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCC-ChhhH
Q 041438 632 DSS-NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYP-SLDVQ 709 (752)
Q Consensus 632 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 709 (752)
... ......||+.|+|||++.+..++.++||||+||++|||+||+.||... ..............+.. .....
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 238 (294)
T 4eqm_A 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE-----TAVSIAIKHIQDSVPNVTTDVRK 238 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSS-----CHHHHHHHHHSSCCCCHHHHSCT
T ss_pred ccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHhhccCCCcchhccc
Confidence 322 223357999999999999999999999999999999999999998521 11111122222222111 11113
Q ss_pred HHHHHHHHHHHhccCcCCCCCC-CHHHHHHHHhhhhcC
Q 041438 710 NKFMSIMQVAFSCLDQNPVSRP-TMKRFEVQSKQFHYN 746 (752)
Q Consensus 710 ~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~~~~~~ 746 (752)
..++.+.+++.+||+.||++|| +++++.+.|+++...
T Consensus 239 ~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 239 DIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred CCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 3556789999999999999998 999999999987544
No 87
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.7e-38 Score=336.92 Aligned_cols=237 Identities=16% Similarity=0.199 Sum_probs=186.0
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-----------------------CccccCCceEEEEEec
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-----------------------NFCSHPRQSFIVYEYL 555 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~lV~E~~ 555 (752)
.++|++.+.||+|+||.||+|+. .+++.||||++...... +++...+..++||||+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 46899999999999999999994 68999999987543221 3345567789999999
Q ss_pred cCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCc-----eEEeecccceecc
Q 041438 556 ESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYE-----AHVSDFRIAKFLN 630 (752)
Q Consensus 556 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~-----~kl~DfG~a~~~~ 630 (752)
+++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++...
T Consensus 88 -~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 88 -GPSLEDLFDLCD--RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp -CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred -CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 889999998642 3589999999999999999999999 9999999999999998887 9999999999765
Q ss_pred CCCCC-------cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCC
Q 041438 631 LDSSN-------WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPY 703 (752)
Q Consensus 631 ~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 703 (752)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.... .....+....+.....+.
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~--~~~~~~~~~~i~~~~~~~ 239 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLK--ADTLKERYQKIGDTKRAT 239 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC--CSSHHHHHHHHHHHHHHS
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccc--cccHHHHHHHHHhhhccC
Confidence 43321 234589999999999999999999999999999999999999996321 011111222222222222
Q ss_pred CChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 704 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
+........+++.+++.+||+.||++||+++++.+.|+++.
T Consensus 240 ~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 240 PIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp CHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred CHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 21111111228999999999999999999999999998764
No 88
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=6.6e-37 Score=329.59 Aligned_cols=307 Identities=25% Similarity=0.382 Sum_probs=260.0
Q ss_pred cCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCc
Q 041438 105 FSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLN 184 (752)
Q Consensus 105 f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 184 (752)
+..+++|++|++++|.+..+ | .|..+++|++|+|++|++++..+ |..+++|++|+|++|.++.. +.|.++++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCS
T ss_pred chhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCC
Confidence 45677888999999988774 3 48888999999999998886544 88899999999999988853 3688899999
Q ss_pred EEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccc
Q 041438 185 HLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSI 264 (752)
Q Consensus 185 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~ 264 (752)
+|+|++|++++..+ +.++++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++
T Consensus 114 ~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~----~~~l~~L~~L~l~~ 186 (347)
T 4fmz_A 114 ELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP----IANLTDLYSLSLNY 186 (347)
T ss_dssp EEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG----GGGCTTCSEEECTT
T ss_pred EEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh----hccCCCCCEEEccC
Confidence 99999999886544 8888999999999986654444 48888899999999998887654 56788999999999
Q ss_pred cccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccc
Q 041438 265 NNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVL 344 (752)
Q Consensus 265 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 344 (752)
|.+++..+ +..+++|++|++++|.+.+..+ +..+++|+.|++++|++++..+ +..+++|++|++++|.+++.
T Consensus 187 n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-- 258 (347)
T 4fmz_A 187 NQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI-- 258 (347)
T ss_dssp SCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--
T ss_pred Cccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--
Confidence 99987554 7889999999999999987655 8889999999999999987655 88999999999999999885
Q ss_pred hhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCchhhhccCC
Q 041438 345 ESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHG 424 (752)
Q Consensus 345 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 424 (752)
..+..+++|++|++++|++++. ..+..+++|++|++++|.+++..+..+..+++|++|+|++|++++..| +..+++
T Consensus 259 ~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~ 334 (347)
T 4fmz_A 259 NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSK 334 (347)
T ss_dssp GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTT
T ss_pred hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhc
Confidence 4688999999999999999865 468899999999999999999999999999999999999999999877 888999
Q ss_pred CcEEEccCCccc
Q 041438 425 LLHIDISYNKLE 436 (752)
Q Consensus 425 L~~L~ls~N~l~ 436 (752)
|++|++++|+++
T Consensus 335 L~~L~l~~N~i~ 346 (347)
T 4fmz_A 335 MDSADFANQVIK 346 (347)
T ss_dssp CSEESSSCC---
T ss_pred cceeehhhhccc
Confidence 999999999985
No 89
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=4.3e-38 Score=344.93 Aligned_cols=235 Identities=22% Similarity=0.300 Sum_probs=179.5
Q ss_pred hcccccc-eeeccCCceEEEEEEe-CCCcEEEEEccCCCCC-----------------C---Cccc----cCCceEEEEE
Q 041438 500 TNDFDAK-HCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLP-----------------D---NFCS----HPRQSFIVYE 553 (752)
Q Consensus 500 ~~~y~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----------------~---~~~~----~~~~~~lV~E 553 (752)
.++|.+. +.||+|+||.||+|+. .+++.||||+++.... . +++. .....|+|||
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E 139 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME 139 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcchhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEE
Confidence 4677776 7899999999999995 5789999998753210 0 1122 2456899999
Q ss_pred eccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCC---CCceEEeecccceecc
Q 041438 554 YLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDL---GYEAHVSDFRIAKFLN 630 (752)
Q Consensus 554 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~---~~~~kl~DfG~a~~~~ 630 (752)
||++|+|.+++.... ...+++..++.|+.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+++...
T Consensus 140 ~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 140 CLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp CCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred eCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 999999999997643 23589999999999999999999999 9999999999999997 7889999999998765
Q ss_pred CCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHH
Q 041438 631 LDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQN 710 (752)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (752)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........+.......+......
T Consensus 216 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~ 293 (400)
T 1nxk_A 216 SH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-ISPGMKTRIRMGQYEFPNPEWSE 293 (400)
T ss_dssp ------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCS-SCCSHHHHHHHTCCCCCTTTTTT
T ss_pred CC-CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccc-ccHHHHHHHHcCcccCCCccccc
Confidence 32 22345689999999999999999999999999999999999999986322111 11123334444444444333445
Q ss_pred HHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 041438 711 KFMSIMQVAFSCLDQNPVSRPTMKRFEVQS 740 (752)
Q Consensus 711 ~~~~l~~li~~cl~~dP~~Rps~~evl~~L 740 (752)
.+.++.++|.+||+.||++|||++|+++|-
T Consensus 294 ~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 294 VSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 677899999999999999999999999874
No 90
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=6.1e-38 Score=334.66 Aligned_cols=225 Identities=22% Similarity=0.305 Sum_probs=180.3
Q ss_pred hcccccceeeccCCceEEEEEEe----CCCcEEEEEccCCCCCC----------------------------CccccCCc
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV----PSGEIFAVKKFHSPLPD----------------------------NFCSHPRQ 547 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~----------------------------~~~~~~~~ 547 (752)
.++|++.+.||+|+||.||+|+. .+++.||+|++++.... +++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 57899999999999999999986 57899999998754210 34456678
Q ss_pred eEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccce
Q 041438 548 SFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAK 627 (752)
Q Consensus 548 ~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~ 627 (752)
.|+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 999999999999999997543 378899999999999999999999 99999999999999999999999999998
Q ss_pred eccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChh
Q 041438 628 FLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLD 707 (752)
Q Consensus 628 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (752)
............+||+.|+|||++.+..++.++|||||||++|||++|+.||.. .........+.......+.
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~-----~~~~~~~~~i~~~~~~~p~-- 242 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG-----ENRKKTIDKILKCKLNLPP-- 242 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC-----SSHHHHHHHHHHTCCCCCT--
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC-----CCHHHHHHHHHhCCCCCCC--
Confidence 654444344456899999999999998999999999999999999999999852 1222333444444444442
Q ss_pred hHHHHHHHHHHHHhccCcCCCCCC-----CHHHHHHH
Q 041438 708 VQNKFMSIMQVAFSCLDQNPVSRP-----TMKRFEVQ 739 (752)
Q Consensus 708 ~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 739 (752)
..+.++.+++.+||+.||++|| +++|+++|
T Consensus 243 --~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 243 --YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp --TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred --CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 3456788999999999999999 77788765
No 91
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.7e-38 Score=338.51 Aligned_cols=233 Identities=20% Similarity=0.286 Sum_probs=169.7
Q ss_pred cccccc---eeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC----------------------CccccCCceEEEEEe
Q 041438 501 NDFDAK---HCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD----------------------NFCSHPRQSFIVYEY 554 (752)
Q Consensus 501 ~~y~~~---~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----------------------~~~~~~~~~~lV~E~ 554 (752)
++|++. +.||+|+||.||+|+. .+++.||||++...... +++.+....|+||||
T Consensus 8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 87 (325)
T 3kn6_A 8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMEL 87 (325)
T ss_dssp HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEc
Confidence 345554 7899999999999995 57899999988643211 455677889999999
Q ss_pred ccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCC---ceEEeecccceeccC
Q 041438 555 LESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGY---EAHVSDFRIAKFLNL 631 (752)
Q Consensus 555 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~---~~kl~DfG~a~~~~~ 631 (752)
+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||+++....
T Consensus 88 ~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 161 (325)
T 3kn6_A 88 LNGGELFERIKKKK---HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP 161 (325)
T ss_dssp CCSCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC
T ss_pred cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCC
Confidence 99999999997643 488999999999999999999999 999999999999997665 799999999987665
Q ss_pred CCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccc--cccccchHhhhccCCCCCChhhH
Q 041438 632 DSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMS--SSSSNMNIEILDSRLPYPSLDVQ 709 (752)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 709 (752)
........+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+....+.......+.....
T Consensus 162 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (325)
T 3kn6_A 162 DNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWK 241 (325)
T ss_dssp ----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHH
T ss_pred CCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCccccc
Confidence 5444555688999999999999999999999999999999999999996322111 11122344455555555555555
Q ss_pred HHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 710 NKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 710 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
..++++.+++.+||+.||++|||++|+++|
T Consensus 242 ~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 242 NVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp TSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred CCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 677889999999999999999999999865
No 92
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.9e-38 Score=338.79 Aligned_cols=222 Identities=20% Similarity=0.287 Sum_probs=185.7
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCC----C-----------------------CccccCCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLP----D-----------------------NFCSHPRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~-----------------------~~~~~~~~~~lV 551 (752)
.++|++.+.||+|+||.||+|+. .+|+.||||++++... . +++.+....|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 57899999999999999999995 5799999998753210 0 344567789999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
|||+++|+|.+++...+ .+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 99999999999997643 488999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHH
Q 041438 632 DSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNK 711 (752)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (752)
. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.. .........+.......+. ..
T Consensus 194 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~-----~~~~~~~~~i~~~~~~~p~----~~ 261 (350)
T 1rdq_E 194 R---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA-----DQPIQIYEKIVSGKVRFPS----HF 261 (350)
T ss_dssp C---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHCCCCCCT----TC
T ss_pred C---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCC-----CCHHHHHHHHHcCCCCCCC----CC
Confidence 2 2345899999999999999999999999999999999999999852 2223344455555555542 34
Q ss_pred HHHHHHHHHhccCcCCCCCCC-----HHHHHHH
Q 041438 712 FMSIMQVAFSCLDQNPVSRPT-----MKRFEVQ 739 (752)
Q Consensus 712 ~~~l~~li~~cl~~dP~~Rps-----~~evl~~ 739 (752)
+.++.++|.+||+.||++||+ ++|+++|
T Consensus 262 ~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred CHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 567899999999999999998 8888765
No 93
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.8e-38 Score=331.43 Aligned_cols=222 Identities=21% Similarity=0.220 Sum_probs=176.2
Q ss_pred hcccccceeeccCCceEEEEEEeC-CCcEEEEEccCCCCCC---------------------------CccccCCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSPLPD---------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---------------------------~~~~~~~~~~lV 551 (752)
.++|++.++||+|+||.||+|+.. +|+.||||++...... +++.+.+..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 368999999999999999999964 7999999987654322 445667889999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
|||+ +++|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 136 ~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp EECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred Eecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 9999 569998887643 3589999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHH
Q 041438 632 DSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNK 711 (752)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (752)
.. ......||+.|+|||++.+ .++.++|||||||++|||++|..|+.... ....+.... .+.......
T Consensus 210 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~--------~~~~~~~~~--~~~~~~~~~ 277 (311)
T 3p1a_A 210 AG-AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE--------GWQQLRQGY--LPPEFTAGL 277 (311)
T ss_dssp ------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH--------HHHHHTTTC--CCHHHHTTS
T ss_pred CC-CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc--------HHHHHhccC--CCcccccCC
Confidence 32 2334579999999998876 78999999999999999999976653111 111121111 111122345
Q ss_pred HHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 712 FMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 712 ~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
++++.+++.+||+.||++|||++|+++|
T Consensus 278 ~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 278 SSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 5679999999999999999999999875
No 94
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1e-38 Score=352.19 Aligned_cols=237 Identities=20% Similarity=0.292 Sum_probs=188.3
Q ss_pred hHHHHHHhhcccccceeeccCCceEEEEEEeC-CCcEEEEEccCCCC------CC---------------------Cccc
Q 041438 492 VYEEIIRATNDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSPL------PD---------------------NFCS 543 (752)
Q Consensus 492 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~------~~---------------------~~~~ 543 (752)
.+.++....++|++.++||+|+||.||+|+.. +++.||+|++++.. .. +++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34566667899999999999999999999954 58899999875311 00 3456
Q ss_pred cCCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeec
Q 041438 544 HPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDF 623 (752)
Q Consensus 544 ~~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~Df 623 (752)
+.+..|+|||||++|+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~--~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcch
Confidence 7788999999999999999997632 3489999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccCCCCC-cccccCCCCccCccccc-----cCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhh
Q 041438 624 RIAKFLNLDSSN-WSKLAGTHGNVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEIL 697 (752)
Q Consensus 624 G~a~~~~~~~~~-~~~~~gt~~y~aPE~~~-----~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 697 (752)
|+|+........ ....+||+.|+|||++. ...++.++|||||||++|||++|+.||.. ....+....+.
T Consensus 220 Gla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~-----~~~~~~~~~i~ 294 (437)
T 4aw2_A 220 GSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA-----ESLVETYGKIM 294 (437)
T ss_dssp TTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCC-----SSHHHHHHHHH
T ss_pred hhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCC-----CChhHHHHhhh
Confidence 999876543332 23358999999999987 45689999999999999999999999852 12222223332
Q ss_pred cc--CCCCCChhhHHHHHHHHHHHHhccCcCCCC--CCCHHHHHHH
Q 041438 698 DS--RLPYPSLDVQNKFMSIMQVAFSCLDQNPVS--RPTMKRFEVQ 739 (752)
Q Consensus 698 ~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~ 739 (752)
.. ....|.. ....++++.++|.+||..+|++ ||+++|+++|
T Consensus 295 ~~~~~~~~p~~-~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 295 NHKERFQFPTQ-VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp THHHHCCCCSS-CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred hccccccCCcc-cccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 21 2233321 1234567899999999988888 9999999876
No 95
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=8.2e-38 Score=336.63 Aligned_cols=230 Identities=20% Similarity=0.281 Sum_probs=176.9
Q ss_pred hhcccccceeeccCCceEEEEEEeC-CCcEEEEEccCCCCCC----------------------CccccCCceEEEEEec
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSPLPD----------------------NFCSHPRQSFIVYEYL 555 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----------------------~~~~~~~~~~lV~E~~ 555 (752)
..++|++.+.||+|+||.||+|+.. +++.||||+++..... +++......++||||+
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 130 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV 130 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence 4578999999999999999999964 6889999998654211 4456678899999999
Q ss_pred cCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCC---CCceEEeecccceeccCC
Q 041438 556 ESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDL---GYEAHVSDFRIAKFLNLD 632 (752)
Q Consensus 556 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~---~~~~kl~DfG~a~~~~~~ 632 (752)
++|+|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 131 ~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 131 TGGELFDRIVEKG---YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CSCBHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred CCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 9999999997543 488999999999999999999999 9999999999999975 889999999999876432
Q ss_pred CCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHHH
Q 041438 633 SSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKF 712 (752)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (752)
.......||+.|+|||++.+..+++++|||||||++|||++|+.||... .........+.......+.......+
T Consensus 205 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~----~~~~~~~~~i~~~~~~~~~~~~~~~~ 279 (349)
T 2w4o_A 205 -VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDE----RGDQFMFRRILNCEYYFISPWWDEVS 279 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCT----TCHHHHHHHHHTTCCCCCTTTTTTSC
T ss_pred -cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCC----cccHHHHHHHHhCCCccCCchhhhCC
Confidence 2233457999999999999999999999999999999999999998521 11112333444444433332334566
Q ss_pred HHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 713 MSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 713 ~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.++.+++.+||+.||++|||++|+++|
T Consensus 280 ~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 280 LNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 789999999999999999999999975
No 96
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-38 Score=338.17 Aligned_cols=225 Identities=19% Similarity=0.283 Sum_probs=181.2
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCC-----C----------------------CccccCCceEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLP-----D----------------------NFCSHPRQSFI 550 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~----------------------~~~~~~~~~~l 550 (752)
..++|++.+.||+|+||.||+|+. .+++.||||++..... . +++......++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 357899999999999999999995 6899999998753210 0 44566788999
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
||||+ +|+|.+++.... .+++.+++.++.||+.||+|||+. ||+||||||+||++++++.+||+|||++....
T Consensus 87 v~E~~-~g~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp EECCC-CEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EEECC-CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 99999 679988886543 488999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCcccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhH
Q 041438 631 LDSSNWSKLAGTHGNVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQ 709 (752)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (752)
.. ......+||+.|+|||++.+..+ ++++||||+||++|+|++|+.||+.. ........+.......+ .
T Consensus 160 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~-----~~~~~~~~i~~~~~~~p----~ 229 (336)
T 3h4j_B 160 DG-NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE-----FIPNLFKKVNSCVYVMP----D 229 (336)
T ss_dssp TS-BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCS-----SSTTCBCCCCSSCCCCC----T
T ss_pred CC-cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCc-----cHHHHHHHHHcCCCCCc----c
Confidence 33 23344589999999999988776 78999999999999999999999622 11112222222222333 2
Q ss_pred HHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 041438 710 NKFMSIMQVAFSCLDQNPVSRPTMKRFEVQS 740 (752)
Q Consensus 710 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 740 (752)
..++++.+++.+||+.||++|||++|+++|-
T Consensus 230 ~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 260 (336)
T 3h4j_B 230 FLSPGAQSLIRRMIVADPMQRITIQEIRRDP 260 (336)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHTTCH
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHHhCh
Confidence 3456788999999999999999999998764
No 97
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.3e-38 Score=351.53 Aligned_cols=225 Identities=21% Similarity=0.282 Sum_probs=184.3
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCC------C---------------------CccccCCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLP------D---------------------NFCSHPRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~---------------------~~~~~~~~~~lV 551 (752)
.++|++.+.||+|+||.||+|+. .+|+.||||+++.... . +++...+..|+|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 57899999999999999999994 5799999998753210 0 345566788999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHh-CCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHN-NCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+ . ||+||||||+|||++.++.+||+|||+|+...
T Consensus 227 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp ECCCSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EeeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 99999999999987543 48899999999999999999998 8 99999999999999999999999999998654
Q ss_pred CCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHH
Q 041438 631 LDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQN 710 (752)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (752)
.........+||+.|+|||++.+..++.++|||||||++|||++|+.||.. .........+.......+. .
T Consensus 301 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~-----~~~~~~~~~i~~~~~~~p~----~ 371 (446)
T 4ejn_A 301 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-----QDHEKLFELILMEEIRFPR----T 371 (446)
T ss_dssp C-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHCCCCCCT----T
T ss_pred CCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCC-----CCHHHHHHHHHhCCCCCCc----c
Confidence 444445557899999999999999999999999999999999999999852 2223333444444554442 3
Q ss_pred HHHHHHHHHHhccCcCCCCCC-----CHHHHHHH
Q 041438 711 KFMSIMQVAFSCLDQNPVSRP-----TMKRFEVQ 739 (752)
Q Consensus 711 ~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 739 (752)
.++++.++|.+||+.||++|| +++|+++|
T Consensus 372 ~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 372 LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 456788999999999999999 99999865
No 98
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=5.8e-38 Score=365.20 Aligned_cols=226 Identities=22% Similarity=0.358 Sum_probs=189.8
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCC----C------------------------CccccCCceE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLP----D------------------------NFCSHPRQSF 549 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~------------------------~~~~~~~~~~ 549 (752)
..++|++.+.||+|+||.||+|+. .+++.||||++++... . .++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 467899999999999999999994 5788999998764210 0 2345667899
Q ss_pred EEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 550 lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
+||||+++|+|.+++...+ .+++..++.|+.||+.||+|||++ +|+||||||+|||++.++++||+|||+|+..
T Consensus 419 lV~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEeCcCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 9999999999999997643 488999999999999999999999 9999999999999999999999999999875
Q ss_pred cCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhH
Q 041438 630 NLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQ 709 (752)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (752)
..........+||+.|+|||++.+..++.++|||||||++|||++|+.||.. ....+....+......+|.
T Consensus 493 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~-----~~~~~~~~~i~~~~~~~p~---- 563 (674)
T 3pfq_A 493 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG-----EDEDELFQSIMEHNVAYPK---- 563 (674)
T ss_dssp CCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHSSCCCCCT----
T ss_pred ccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCC-----CCHHHHHHHHHhCCCCCCc----
Confidence 5444455567899999999999999999999999999999999999999962 2334455666666666653
Q ss_pred HHHHHHHHHHHhccCcCCCCCCCH-----HHHHHH
Q 041438 710 NKFMSIMQVAFSCLDQNPVSRPTM-----KRFEVQ 739 (752)
Q Consensus 710 ~~~~~l~~li~~cl~~dP~~Rps~-----~evl~~ 739 (752)
..++++.++|.+||++||++||++ +|+++|
T Consensus 564 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 564 SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 356678999999999999999997 666644
No 99
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.5e-36 Score=336.34 Aligned_cols=324 Identities=21% Similarity=0.209 Sum_probs=258.7
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceee
Q 041438 84 GRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILH 163 (752)
Q Consensus 84 ~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 163 (752)
.++..++++++.+.+. + .|..+++|++|+|++|+|+++ | |+++++|++|+|++|+|++. | |+++++|++|+
T Consensus 42 ~~L~~L~Ls~n~l~~~-~--~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T--GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLN 112 (457)
T ss_dssp TTCCEEECCSSCCCCC-T--TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEE
T ss_pred CCCCEEEccCCCcccC-h--hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEE
Confidence 4577888888888874 2 688899999999999999885 3 88999999999999999875 3 88899999999
Q ss_pred ccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCC
Q 041438 164 ISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNG 243 (752)
Q Consensus 164 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 243 (752)
|++|++++. | ++.+++|++|+|++|++++. + ++++++|++|++++|+..+.+ .++.+++|+.|++++|++++
T Consensus 113 L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~ 184 (457)
T 3bz5_A 113 CDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE 184 (457)
T ss_dssp CCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC
T ss_pred CCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce
Confidence 999999874 4 88899999999999999975 3 788899999999999665555 47888999999999999987
Q ss_pred CcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCccc
Q 041438 244 AIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGEL 323 (752)
Q Consensus 244 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 323 (752)
. | ++.+++|+.|++++|++++. .+..+++|++|++++|++++ +| ++.+++|+.|++++|++++..+..+
T Consensus 185 l-~----l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l 253 (457)
T 3bz5_A 185 L-D----VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTL 253 (457)
T ss_dssp C-C----CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTC
T ss_pred e-c----cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHC
Confidence 3 2 57888999999999999875 47888999999999999987 45 7888999999999999998776666
Q ss_pred CCCc-------ccceeeccccccccccchhhcccccccEEEcCCCcCccccch--------hccccccCCeeecCCccCC
Q 041438 324 GSLI-------NLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPI--------ELDNLIHLSELDLSHNFLG 388 (752)
Q Consensus 324 ~~l~-------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~--------~~~~l~~L~~L~Ls~N~l~ 388 (752)
.++. +|+.|++++|.+.+..| ++.+++|+.|++++|.+.+.+|. .+.++++|++|+|++|+++
T Consensus 254 ~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~ 331 (457)
T 3bz5_A 254 SKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELT 331 (457)
T ss_dssp TTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCS
T ss_pred CCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccc
Confidence 6655 56777777777666555 46788899999999987666654 2556678888888888888
Q ss_pred CCCCcccccccccceEEccCCcCCcCCchhhh-------------ccCCCcEEEccCCcccCcCCCC
Q 041438 389 EKISSRICRMESLEKLNLSYNNLSGLIPRCFE-------------ELHGLLHIDISYNKLEGHIPNS 442 (752)
Q Consensus 389 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-------------~l~~L~~L~ls~N~l~~~~p~~ 442 (752)
+. + ++.+++|+.|++++|++++. + .+. .+..|..+++++|+++|.+|..
T Consensus 332 ~l-~--l~~l~~L~~L~l~~N~l~~l-~-~L~~L~l~~n~l~g~~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 332 EL-D--VSHNTKLKSLSCVNAHIQDF-S-SVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp CC-C--CTTCTTCSEEECCSSCCCBC-T-TGGGSSGGGTSEEEEEEEEECCCBCCBTTBEEEECCTT
T ss_pred cc-c--cccCCcCcEEECCCCCCCCc-c-ccccccccCCcEEecceeeecCccccccCcEEEEcChh
Confidence 85 2 77888888888888888874 2 111 1234667788888888877753
No 100
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.4e-37 Score=326.82 Aligned_cols=239 Identities=17% Similarity=0.218 Sum_probs=188.2
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-----------------------CccccCCceEEEEEe
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-----------------------NFCSHPRQSFIVYEY 554 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~lV~E~ 554 (752)
..++|++.+.||+|+||.||+|+. .+++.||||++...... .+.......++||||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 467899999999999999999994 68999999987543322 122455678999999
Q ss_pred ccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEe---CCCCceEEeecccceeccC
Q 041438 555 LESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLL---DLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 555 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll---~~~~~~kl~DfG~a~~~~~ 631 (752)
+ +++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||++ ++++.+||+|||.++....
T Consensus 87 ~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 87 L-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp C-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred c-CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 9 889999997433 3489999999999999999999999 99999999999999 4788999999999988764
Q ss_pred CCCC-------cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCC
Q 041438 632 DSSN-------WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYP 704 (752)
Q Consensus 632 ~~~~-------~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (752)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .........+.......+
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~ 238 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKA--ATKRQKYERISEKKMSTP 238 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC--SSSSSHHHHHHHHHHHSC
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCc--hhhhhhhhhhcccccCCc
Confidence 4321 2345799999999999999999999999999999999999999863211 111122222222222222
Q ss_pred Ch-hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 705 SL-DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 705 ~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
.. .....++++.+++.+||+.||++|||++|+++.|+++..
T Consensus 239 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 280 (296)
T 3uzp_A 239 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHH
Confidence 10 112345678999999999999999999999999998753
No 101
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.2e-38 Score=329.17 Aligned_cols=226 Identities=22% Similarity=0.306 Sum_probs=177.8
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCC-----------------------------C----------
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLP-----------------------------D---------- 539 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----------------------------~---------- 539 (752)
.++|++.+.||+|+||.||+|+. .+++.||||++..... .
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 47899999999999999999984 5789999998854320 0
Q ss_pred -----------Ccccc--CCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCC
Q 041438 540 -----------NFCSH--PRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDIS 606 (752)
Q Consensus 540 -----------~~~~~--~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlK 606 (752)
+++.+ ....|+||||+++++|.++... ..+++.+++.++.||+.||+|||+. +|+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 22222 4678999999999999886543 3489999999999999999999999 99999999
Q ss_pred CCCEEeCCCCceEEeecccceeccCCCCCcccccCCCCccCccccccCC---CCCccchhhHHHHHHHHHhCCCCcchhh
Q 041438 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFLF 683 (752)
Q Consensus 607 p~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~ksDIwSlGvil~elltg~~pf~~~~ 683 (752)
|+||+++.++.+||+|||+++.............||+.|+|||++.+.. ++.++|||||||++|||++|+.||...
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~- 243 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE- 243 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS-
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc-
Confidence 9999999999999999999988765444444568999999999988665 378899999999999999999998521
Q ss_pred ccccccccchHhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 684 EMSSSSSNMNIEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
........+.......+. ....++++.+++.+||+.||++|||++|+++|
T Consensus 244 ----~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 244 ----RIMCLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp ----SHHHHHHHHHHCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred ----cHHHHHHHHhcccCCCCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 111222233333333332 12345678999999999999999999999865
No 102
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-37 Score=331.84 Aligned_cols=247 Identities=24% Similarity=0.330 Sum_probs=185.7
Q ss_pred hhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-----------------------CccccC----CceEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-----------------------NFCSHP----RQSFIV 551 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------------~~~~~~----~~~~lV 551 (752)
..++|++.+.||+|+||.||+|+.. ++.||||++...... +++... ...++|
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 113 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLI 113 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEE
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEE
Confidence 4578999999999999999999874 899999987432111 122222 678999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCC-----CCCeeecCCCCCCEEeCCCCceEEeecccc
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNC-----FPPIVHWDISSKNVLLDLGYEAHVSDFRIA 626 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-----~~~ivH~DlKp~NIll~~~~~~kl~DfG~a 626 (752)
|||+++|+|.++++.. .+++..++.++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+|||++
T Consensus 114 ~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 114 TDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp ECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence 9999999999999654 3889999999999999999999762 238999999999999999999999999999
Q ss_pred eeccCCCCC----cccccCCCCccCccccccCCCCCc------cchhhHHHHHHHHHhC----------CCCcchhhccc
Q 041438 627 KFLNLDSSN----WSKLAGTHGNVAPELAYTMKVTEK------CDVYSFGVLALEVIKG----------KHPRDFLFEMS 686 (752)
Q Consensus 627 ~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~k------sDIwSlGvil~elltg----------~~pf~~~~~~~ 686 (752)
+........ .....||+.|+|||++.+...+.+ +|||||||++|||+|| +.||.......
T Consensus 190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 269 (337)
T 3mdy_A 190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269 (337)
T ss_dssp EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence 876543322 124579999999999987776665 9999999999999999 55553211111
Q ss_pred cccccchHhhhccC--CCCCC-hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcCCCCC
Q 041438 687 SSSSNMNIEILDSR--LPYPS-LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDHN 750 (752)
Q Consensus 687 ~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~ 750 (752)
.........+.... ...+. .....+++++.+++.+||+.||++|||++|++++|+++..+.+..
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 336 (337)
T 3mdy_A 270 PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDIK 336 (337)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTTCC
T ss_pred CchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcccC
Confidence 11111111111111 11221 112367788999999999999999999999999999998776543
No 103
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=6.1e-38 Score=333.98 Aligned_cols=242 Identities=22% Similarity=0.296 Sum_probs=183.4
Q ss_pred hhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-----------------------Ccccc----CCceEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-----------------------NFCSH----PRQSFIV 551 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------------~~~~~----~~~~~lV 551 (752)
..++|++.+.||+|+||.||+|+.. ++.||||++...... +++.. ....++|
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 4578999999999999999999874 899999988543211 22222 2346999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCC-------CCCeeecCCCCCCEEeCCCCceEEeecc
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNC-------FPPIVHWDISSKNVLLDLGYEAHVSDFR 624 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-------~~~ivH~DlKp~NIll~~~~~~kl~DfG 624 (752)
|||+++|+|.+++.... +++..++.++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+|||
T Consensus 101 ~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg 176 (322)
T 3soc_A 101 TAFHEKGSLSDFLKANV----VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176 (322)
T ss_dssp EECCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT
T ss_pred EecCCCCCHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC
Confidence 99999999999997543 899999999999999999999862 2389999999999999999999999999
Q ss_pred cceeccCCCCC--cccccCCCCccCccccccC-----CCCCccchhhHHHHHHHHHhCCCCcchhhccccc---------
Q 041438 625 IAKFLNLDSSN--WSKLAGTHGNVAPELAYTM-----KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSS--------- 688 (752)
Q Consensus 625 ~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~-----~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~--------- 688 (752)
+++........ .....||+.|+|||++.+. .++.++|||||||++|||+||+.||.........
T Consensus 177 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 256 (322)
T 3soc_A 177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQH 256 (322)
T ss_dssp TCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSS
T ss_pred cccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccC
Confidence 99876543322 2335799999999998863 4567899999999999999999998632211000
Q ss_pred -ccc-chHhhhccCC-CCCCh--hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 689 -SSN-MNIEILDSRL-PYPSL--DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 689 -~~~-~~~~~~~~~~-~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
... ....+..... +.... .....++++.+++.+||+.||++|||++|+++.|+++..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 257 PSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 001 1111111111 11111 123456679999999999999999999999999998863
No 104
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2e-37 Score=331.10 Aligned_cols=228 Identities=20% Similarity=0.351 Sum_probs=180.3
Q ss_pred hhcccccceeeccCCceEEEEEEeC-CCcEEEEEccCCCCCC-------------------------Cccc---------
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSPLPD-------------------------NFCS--------- 543 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------------------------~~~~--------- 543 (752)
..++|++.+.||+|+||.||+|+.. +|+.||||+++..... +++.
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 4678999999999999999999964 8999999998643221 1111
Q ss_pred ------------------------------------------------cCCceEEEEEeccCCChHHHhccCccccccCH
Q 041438 544 ------------------------------------------------HPRQSFIVYEYLESGSLDKILNNDASAKELGW 575 (752)
Q Consensus 544 ------------------------------------------------~~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~ 575 (752)
.....++|||||++|+|.+++.........++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 11237999999999999999988766566777
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCCC------------CcccccCCC
Q 041438 576 TQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSS------------NWSKLAGTH 643 (752)
Q Consensus 576 ~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~------------~~~~~~gt~ 643 (752)
..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....... ......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 88999999999999999999 999999999999999999999999999998764421 123347999
Q ss_pred CccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHHHHHHHHHHHhcc
Q 041438 644 GNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKFMSIMQVAFSCL 723 (752)
Q Consensus 644 ~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 723 (752)
.|+|||++.+..++.++||||+||++|||++|..|+.... ......... ..+ ......++++.+++.+||
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-------~~~~~~~~~--~~~-~~~~~~~~~~~~li~~~l 310 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-------RIITDVRNL--KFP-LLFTQKYPQEHMMVQDML 310 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-------HHHHHHHTT--CCC-HHHHHHCHHHHHHHHHHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-------HHHHHhhcc--CCC-cccccCChhHHHHHHHHc
Confidence 9999999999999999999999999999999988863211 111122222 222 233556677899999999
Q ss_pred CcCCCCCCCHHHHHHH
Q 041438 724 DQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 724 ~~dP~~Rps~~evl~~ 739 (752)
+.||++|||++|+++|
T Consensus 311 ~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 311 SPSPTERPEATDIIEN 326 (332)
T ss_dssp CSSGGGSCCHHHHHHS
T ss_pred cCCCCcCCCHHHHhhc
Confidence 9999999999999875
No 105
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=7.4e-38 Score=327.85 Aligned_cols=233 Identities=22% Similarity=0.297 Sum_probs=175.0
Q ss_pred cccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC--------------------------CccccCCceEEEEEe
Q 041438 501 NDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIVYEY 554 (752)
Q Consensus 501 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV~E~ 554 (752)
++|++.+.||+|+||.||+|+..+|+.||+|+++..... +++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 579999999999999999999888999999988643211 345566789999999
Q ss_pred ccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCCC
Q 041438 555 LESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSS 634 (752)
Q Consensus 555 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~ 634 (752)
+++ +|.+++.... ..+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR 155 (288)
T ss_dssp CSE-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred cCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccc
Confidence 986 9999887543 3488899999999999999999999 999999999999999999999999999987654433
Q ss_pred CcccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHhCCCCcchhhccccc----------ccc---chHh--hhc
Q 041438 635 NWSKLAGTHGNVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSS----------SSN---MNIE--ILD 698 (752)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~-~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~----------~~~---~~~~--~~~ 698 (752)
......||+.|+|||++.+. .++.++||||+||++|||++|+.||......... ... .... ..+
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccc
Confidence 44455789999999998764 5899999999999999999999998532110000 000 0000 000
Q ss_pred cCCC----CC-ChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 699 SRLP----YP-SLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 699 ~~~~----~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.... .+ .......++++.+++.+||+.||++|||++|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000 00 00012345678899999999999999999999875
No 106
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1e-36 Score=355.04 Aligned_cols=355 Identities=21% Similarity=0.229 Sum_probs=291.8
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceee
Q 041438 84 GRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILH 163 (752)
Q Consensus 84 ~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 163 (752)
.....++|+++.+.+ +++.+|.++++|++|+|++|+|+++.+.+|.++++|++|+|++|+|+++.+..|+++++|++|+
T Consensus 76 ~~L~~L~Ls~N~i~~-i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~ 154 (635)
T 4g8a_A 76 PELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 154 (635)
T ss_dssp TTCCEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCC-cChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeec
Confidence 467789999988875 5567899999999999999999999999999999999999999999998888999999999999
Q ss_pred ccCcccCCC-CCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcce----EEeecccccccccccc--------------
Q 041438 164 ISRNQLNGS-IPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLV----FLYLYNNSFSGSIPQQ-------------- 224 (752)
Q Consensus 164 Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~-------------- 224 (752)
|++|.|++. +|..++.+++|++|+|++|+|++..|..|..+.+++ .++++.|.++...+..
T Consensus 155 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n 234 (635)
T 4g8a_A 155 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNN 234 (635)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred cccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcc
Confidence 999999864 678899999999999999999988887776544332 3444444433221111
Q ss_pred --------------------------------------------------------------------------------
Q 041438 225 -------------------------------------------------------------------------------- 224 (752)
Q Consensus 225 -------------------------------------------------------------------------------- 224 (752)
T Consensus 235 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 314 (635)
T 4g8a_A 235 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLV 314 (635)
T ss_dssp CSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEE
T ss_pred cccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccc
Confidence
Q ss_pred ---------ccCccccccccccccccCCCcCCC-----------------CCCCCCCCCcEEEccccccCCC--------
Q 041438 225 ---------IGNLKSLFDMKLCINQLNGAIPLS-----------------IDWGRCPQLSLLDVSINNITGN-------- 270 (752)
Q Consensus 225 ---------~~~l~~L~~l~l~~N~l~~~~~~~-----------------~~~~~l~~L~~L~Ls~N~l~~~-------- 270 (752)
+....+|+.|++.+|.+.+..+.. ..+..+++|+.|+++.|.+...
T Consensus 315 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~ 394 (635)
T 4g8a_A 315 SVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDF 394 (635)
T ss_dssp SCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHH
T ss_pred ccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchh
Confidence 111223444555555554332211 1233567888888888877431
Q ss_pred -----------------CCcccCCCCCCCEEecCCCcCcCCCC-ccccCCcccCEEEccCCcCcccCCcccCCCccccee
Q 041438 271 -----------------IPFEIGESPQLQYLDLSSNYIVGEIP-TQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYL 332 (752)
Q Consensus 271 -----------------~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 332 (752)
.+..+..+++|+.++++.|.+....+ ..|..+.+++.++++.|.+.+..+..+..+++|+.|
T Consensus 395 ~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L 474 (635)
T 4g8a_A 395 GTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 474 (635)
T ss_dssp SCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred hhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhh
Confidence 23345677888888888888766554 568899999999999999999999999999999999
Q ss_pred ecccccc-ccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcC
Q 041438 333 DLSANHL-SNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNL 411 (752)
Q Consensus 333 ~Ls~N~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 411 (752)
+|++|.+ .+..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++.++..|..+++|+.|+|++|+|
T Consensus 475 ~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l 554 (635)
T 4g8a_A 475 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 554 (635)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCC
T ss_pred hhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcC
Confidence 9999985 556788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCchhhhcc-CCCcEEEccCCcccCcC
Q 041438 412 SGLIPRCFEEL-HGLLHIDISYNKLEGHI 439 (752)
Q Consensus 412 ~~~~p~~~~~l-~~L~~L~ls~N~l~~~~ 439 (752)
++.+|..|..+ ++|+.|+|++|++....
T Consensus 555 ~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 555 MTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp CBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred CCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 99999999998 68999999999998754
No 107
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=9.1e-38 Score=340.05 Aligned_cols=229 Identities=19% Similarity=0.267 Sum_probs=186.7
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC------------------------CccccCCceEEEEEe
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD------------------------NFCSHPRQSFIVYEY 554 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------------------------~~~~~~~~~~lV~E~ 554 (752)
.++|++.+.||+|+||.||+|+. .+|+.||+|++...... +++.+....++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 56899999999999999999995 57899999988653211 445667889999999
Q ss_pred ccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCC--CCceEEeecccceeccCC
Q 041438 555 LESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDL--GYEAHVSDFRIAKFLNLD 632 (752)
Q Consensus 555 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~--~~~~kl~DfG~a~~~~~~ 632 (752)
+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 130 ~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~ 204 (387)
T 1kob_A 130 LSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD 204 (387)
T ss_dssp CCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred CCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCC
Confidence 99999999987543 3488999999999999999999999 9999999999999974 577999999999987543
Q ss_pred CCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHHH
Q 041438 633 SSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKF 712 (752)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (752)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||... ........+.......+.......+
T Consensus 205 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~s 278 (387)
T 1kob_A 205 E-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE-----DDLETLQNVKRCDWEFDEDAFSSVS 278 (387)
T ss_dssp S-CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHHCCCCCCSSTTTTSC
T ss_pred c-ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCCCCccccccCC
Confidence 2 234458999999999999999999999999999999999999998521 1122233333333333333334566
Q ss_pred HHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 713 MSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 713 ~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
+++.++|.+||+.||++|||++|+++|
T Consensus 279 ~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 279 PEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 789999999999999999999999976
No 108
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=8.7e-38 Score=326.34 Aligned_cols=233 Identities=23% Similarity=0.341 Sum_probs=185.1
Q ss_pred hhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-----------------------CccccCCceEEEEEec
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-----------------------NFCSHPRQSFIVYEYL 555 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~lV~E~~ 555 (752)
..++|++.+.||+|+||.||+|+..++..||||+++..... +++.+.+..++||||+
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 45789999999999999999999888889999998764322 3456677889999999
Q ss_pred cCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCC-C
Q 041438 556 ESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS-S 634 (752)
Q Consensus 556 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~-~ 634 (752)
++++|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.++...... .
T Consensus 102 ~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 176 (283)
T 3gen_A 102 ANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 176 (283)
T ss_dssp TTCBHHHHHHCGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH
T ss_pred CCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccccc
Confidence 9999999997633 3488999999999999999999999 99999999999999999999999999998654321 1
Q ss_pred CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhccCCCCCChhhHHHHH
Q 041438 635 NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKFM 713 (752)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (752)
......+|+.|+|||++.+..++.++||||+||++|||+| |+.||... ........+......... ...++
T Consensus 177 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~-----~~~~~~~~~~~~~~~~~~---~~~~~ 248 (283)
T 3gen_A 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF-----TNSETAEHIAQGLRLYRP---HLASE 248 (283)
T ss_dssp STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHHHHHHHHHTTCCCCCC---TTCCH
T ss_pred cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc-----ChhHHHHHHhcccCCCCC---CcCCH
Confidence 1122356788999999998899999999999999999998 99998521 111222222222211111 22345
Q ss_pred HHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 714 SIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 714 ~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
.+.+++.+||+.||++|||++|++++|+++.
T Consensus 249 ~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 249 KVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 7889999999999999999999999999875
No 109
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=346.34 Aligned_cols=236 Identities=22% Similarity=0.272 Sum_probs=186.5
Q ss_pred hHHHHHHhhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCC------CC---------------------Cccc
Q 041438 492 VYEEIIRATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPL------PD---------------------NFCS 543 (752)
Q Consensus 492 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~------~~---------------------~~~~ 543 (752)
.++++....++|++.+.||+|+||.||+|+. .+|+.||||++++.. .. .++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 4556666789999999999999999999995 579999999885321 00 3456
Q ss_pred cCCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeec
Q 041438 544 HPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDF 623 (752)
Q Consensus 544 ~~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~Df 623 (752)
+.+..|+||||+++|+|.+++.+.+ ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++++||+||
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DF 206 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADF 206 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeec
Confidence 6788999999999999999997543 2488999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccCCCCC-cccccCCCCccCccccc-------cCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHh
Q 041438 624 RIAKFLNLDSSN-WSKLAGTHGNVAPELAY-------TMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIE 695 (752)
Q Consensus 624 G~a~~~~~~~~~-~~~~~gt~~y~aPE~~~-------~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~ 695 (752)
|+++........ ....+||+.|+|||++. +..++.++|||||||++|||++|+.||.. ....+....
T Consensus 207 Gla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~-----~~~~~~~~~ 281 (412)
T 2vd5_A 207 GSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA-----DSTAETYGK 281 (412)
T ss_dssp TTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCC-----SSHHHHHHH
T ss_pred hhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCC-----CCHHHHHHH
Confidence 999887543322 23358999999999987 35689999999999999999999999852 122222233
Q ss_pred hhcc--CCCCCChhhHHHHHHHHHHHHhccCcCCCCC---CCHHHHHHH
Q 041438 696 ILDS--RLPYPSLDVQNKFMSIMQVAFSCLDQNPVSR---PTMKRFEVQ 739 (752)
Q Consensus 696 ~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---ps~~evl~~ 739 (752)
+... ....+. .....++++.++|.+||. +|++| |+++|+++|
T Consensus 282 i~~~~~~~~~p~-~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 282 IVHYKEHLSLPL-VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HHTHHHHCCCC-----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred HHhcccCcCCCc-cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 3321 122221 113456688999999999 99998 589998876
No 110
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=7.6e-38 Score=333.21 Aligned_cols=230 Identities=23% Similarity=0.301 Sum_probs=183.2
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------------CccccCCceEEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-------------------------NFCSHPRQSFIVY 552 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~lV~ 552 (752)
..++|++.+.||+|+||.||+|+. .+++.||||++...... +++.+.+..|+||
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 357899999999999999999995 47999999987543211 4456678889999
Q ss_pred EeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCC
Q 041438 553 EYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLD 632 (752)
Q Consensus 553 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~ 632 (752)
||+++|+|.+++.... .+++.+++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++.....
T Consensus 85 e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 85 EYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp ECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred EcCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 9999999999987543 488999999999999999999999 9999999999999999999999999999876432
Q ss_pred C--CCcccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhH
Q 041438 633 S--SNWSKLAGTHGNVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQ 709 (752)
Q Consensus 633 ~--~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (752)
. .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||.... ................+ ...
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~~~~~~~~~~~~~~--~~~ 232 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS----DSCQEYSDWKEKKTYLN--PWK 232 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSC----TTSHHHHHHHTTCTTST--TGG
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc----hHHHHHHHHhcccccCC--ccc
Confidence 2 22334589999999999987775 789999999999999999999985211 11111222222222222 224
Q ss_pred HHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 041438 710 NKFMSIMQVAFSCLDQNPVSRPTMKRFEVQS 740 (752)
Q Consensus 710 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 740 (752)
..+..+.+++.+||+.||++|||++|++++-
T Consensus 233 ~~~~~~~~li~~~L~~dP~~R~t~~eil~h~ 263 (323)
T 3tki_A 233 KIDSAPLALLHKILVENPSARITIPDIKKDR 263 (323)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence 5567788999999999999999999998763
No 111
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=8.3e-38 Score=339.32 Aligned_cols=226 Identities=26% Similarity=0.370 Sum_probs=181.8
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCC---------------------------CCccccCCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLP---------------------------DNFCSHPRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---------------------------~~~~~~~~~~~lV 551 (752)
.++|++.+.||+|+||.||+|+. .+++.||+|++.+... .+++...+..|+|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 47899999999999999999994 5689999998753210 0345667889999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
|||+.+|+|.+++.... .+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+|+....
T Consensus 94 ~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNV---HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp ECCCTTEEHHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 99999999999997643 488999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCCcccccCCCCccCcccccc---CCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhh
Q 041438 632 DSSNWSKLAGTHGNVAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDV 708 (752)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (752)
. ......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ..........+.......+
T Consensus 168 ~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~--~~~~~~~~~~~~~~~~~~p---- 240 (384)
T 4fr4_A 168 E-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRS--STSSKEIVHTFETTVVTYP---- 240 (384)
T ss_dssp T-CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCT--TSCHHHHHHHHHHCCCCCC----
T ss_pred C-CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCC--CccHHHHHHHHhhcccCCC----
Confidence 3 33455689999999999874 458999999999999999999999985211 1111222233333344444
Q ss_pred HHHHHHHHHHHHhccCcCCCCCCC-HHHHHH
Q 041438 709 QNKFMSIMQVAFSCLDQNPVSRPT-MKRFEV 738 (752)
Q Consensus 709 ~~~~~~l~~li~~cl~~dP~~Rps-~~evl~ 738 (752)
...+.++.++|.+||+.||++||+ ++++.+
T Consensus 241 ~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 241 SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 234567899999999999999998 677664
No 112
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.3e-37 Score=325.89 Aligned_cols=236 Identities=22% Similarity=0.319 Sum_probs=180.0
Q ss_pred hhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC--------------------------CccccCCceEEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIVY 552 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV~ 552 (752)
..++|++.+.||+|+||.||+|+.. ..+|+|.++..... ++ ...+..++||
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~-~~~~~~~lv~ 110 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY-MTKDNLAIVT 110 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEE-ECSSSCEEEE
T ss_pred cccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEE-EccCcEEEEE
Confidence 3568999999999999999999863 35888887653322 22 2346689999
Q ss_pred EeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCC
Q 041438 553 EYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLD 632 (752)
Q Consensus 553 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~ 632 (752)
||+++++|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 111 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred ecCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 9999999999997543 3588999999999999999999999 9999999999999999999999999999865421
Q ss_pred --CCCcccccCCCCccCccccc---cCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCC--C
Q 041438 633 --SSNWSKLAGTHGNVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYP--S 705 (752)
Q Consensus 633 --~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~ 705 (752)
........||+.|+|||++. +..++.++|||||||++|||++|+.||.... ...............+ .
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~-----~~~~~~~~~~~~~~~~~~~ 260 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN-----NRDQIIFMVGRGYASPDLS 260 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CHHHHHHHHHHTCCCCCST
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCC-----cHHHHHHHHhcCCCCcchh
Confidence 12233457999999999886 5668899999999999999999999985211 1111111111111111 1
Q ss_pred hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcCC
Q 041438 706 LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNP 747 (752)
Q Consensus 706 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 747 (752)
.....+++.+.+++.+||+.||++||++.|++++++.+....
T Consensus 261 ~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 111345667899999999999999999999999999987544
No 113
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.3e-37 Score=322.71 Aligned_cols=227 Identities=24% Similarity=0.362 Sum_probs=172.4
Q ss_pred hcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC----------------------------CccccCCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD----------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------------~~~~~~~~~~lV 551 (752)
.++|++.+.||+|+||.||+|+. .++.||||+++..... +++...+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 46899999999999999999987 4899999998643211 345567788999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCC---eeecCCCCCCEEeCC--------CCceEE
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP---IVHWDISSKNVLLDL--------GYEAHV 620 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~---ivH~DlKp~NIll~~--------~~~~kl 620 (752)
|||+++++|.+++... .+++..++.++.|++.||+|||+. + |+||||||+||+++. ++.+||
T Consensus 85 ~e~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~---~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl 157 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDE---AIVPIIHRDLKSSNILILQKVENGDLSNKILKI 157 (271)
T ss_dssp EECCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHS---SSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEE
T ss_pred EEcCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CCCceeecCCchHHEEEecccccccccCcceEE
Confidence 9999999999998643 488999999999999999999999 7 999999999999986 678999
Q ss_pred eecccceeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccC
Q 041438 621 SDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSR 700 (752)
Q Consensus 621 ~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 700 (752)
+|||.++...... .....||+.|+|||++.+..+++++||||+|+++|+|++|+.||.... .......+....
T Consensus 158 ~Dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~ 230 (271)
T 3dtc_A 158 TDFGLAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID-----GLAVAYGVAMNK 230 (271)
T ss_dssp CCCCC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC-----HHHHHHHHHTSC
T ss_pred ccCCccccccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHhhhcCC
Confidence 9999998764332 234579999999999999999999999999999999999999985211 111122222222
Q ss_pred CCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhh
Q 041438 701 LPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQF 743 (752)
Q Consensus 701 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 743 (752)
...+. ....++.+.+++.+||+.||++|||++|++++|+++
T Consensus 231 ~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 231 LALPI--PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CCCCC--CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 22111 133456789999999999999999999999999864
No 114
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.1e-37 Score=328.44 Aligned_cols=228 Identities=19% Similarity=0.250 Sum_probs=186.6
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC------------------------------CccccCCce
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD------------------------------NFCSHPRQS 548 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------------------------------~~~~~~~~~ 548 (752)
.++|++.+.||+|+||.||+|+. .+|+.||||+++..... +++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 56799999999999999999995 47899999988643211 345566789
Q ss_pred EEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCC----ceEEeecc
Q 041438 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGY----EAHVSDFR 624 (752)
Q Consensus 549 ~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~----~~kl~DfG 624 (752)
++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS---CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 99999999999999997543 488899999999999999999999 999999999999999887 79999999
Q ss_pred cceeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCC
Q 041438 625 IAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYP 704 (752)
Q Consensus 625 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (752)
++....... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.. .........+.......+
T Consensus 165 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~-----~~~~~~~~~i~~~~~~~~ 238 (321)
T 2a2a_A 165 LAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG-----DTKQETLANITSVSYDFD 238 (321)
T ss_dssp TCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC-----SSHHHHHHHHHTTCCCCC
T ss_pred cceecCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCC-----CCHHHHHHHHHhcccccC
Confidence 998775432 23445799999999999999999999999999999999999999852 122223333444444443
Q ss_pred ChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 705 SLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 705 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.......+..+.+++.+||+.||++|||++|+++|
T Consensus 239 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 239 EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 32234456678999999999999999999999975
No 115
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=5.2e-38 Score=339.84 Aligned_cols=240 Identities=20% Similarity=0.299 Sum_probs=187.5
Q ss_pred HHHHHhhcccccceeeccCCceEEEEEEe------CCCcEEEEEccCCCCCC--------------------------Cc
Q 041438 494 EEIIRATNDFDAKHCIGKGGHGSVYIARV------PSGEIFAVKKFHSPLPD--------------------------NF 541 (752)
Q Consensus 494 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~--------------------------~~ 541 (752)
.++....++|++.+.||+|+||.||+|+. .+++.||||+++..... ++
T Consensus 15 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~ 94 (359)
T 3vhe_A 15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 94 (359)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeee
Confidence 34445678999999999999999999973 35689999998654221 22
Q ss_pred ccc-CCceEEEEEeccCCChHHHhccCcc---------------------------------------------------
Q 041438 542 CSH-PRQSFIVYEYLESGSLDKILNNDAS--------------------------------------------------- 569 (752)
Q Consensus 542 ~~~-~~~~~lV~E~~~~g~L~~~l~~~~~--------------------------------------------------- 569 (752)
+.. ....++||||+++|+|.+++.....
T Consensus 95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (359)
T 3vhe_A 95 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLS 174 (359)
T ss_dssp ECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------
T ss_pred eecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccc
Confidence 333 3458999999999999999976532
Q ss_pred ------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCCC--C
Q 041438 570 ------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSS--N 635 (752)
Q Consensus 570 ------------~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~--~ 635 (752)
...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 175 ~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 251 (359)
T 3vhe_A 175 DVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 251 (359)
T ss_dssp ---------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEE
T ss_pred hhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchh
Confidence 11288999999999999999999999 999999999999999999999999999987643322 1
Q ss_pred cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhcc-CCCCCChhhHHHHH
Q 041438 636 WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDS-RLPYPSLDVQNKFM 713 (752)
Q Consensus 636 ~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 713 (752)
.....||+.|+|||++.+..++.++|||||||++|||+| |+.||.... ........+... ....+ ...++
T Consensus 252 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~----~~~~~~~~~~~~~~~~~~----~~~~~ 323 (359)
T 3vhe_A 252 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK----IDEEFCRRLKEGTRMRAP----DYTTP 323 (359)
T ss_dssp C--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC----CSHHHHHHHHHTCCCCCC----TTCCH
T ss_pred ccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccc----hhHHHHHHHHcCCCCCCC----CCCCH
Confidence 233578899999999999999999999999999999998 999985211 111111222221 12222 23456
Q ss_pred HHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 714 SIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 714 ~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
++.+++.+||+.||++|||++|++++|+++.
T Consensus 324 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 324 EMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 7899999999999999999999999999875
No 116
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=9.1e-38 Score=338.11 Aligned_cols=235 Identities=20% Similarity=0.221 Sum_probs=180.7
Q ss_pred hHHHHHHhhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC----------------------------Ccc
Q 041438 492 VYEEIIRATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD----------------------------NFC 542 (752)
Q Consensus 492 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----------------------------~~~ 542 (752)
++++.....++|++.++||+|+||.||+|+. .+++.||||+++..... +++
T Consensus 26 ~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~ 105 (360)
T 3llt_A 26 SWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKF 105 (360)
T ss_dssp CCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEE
T ss_pred eeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeeccccee
Confidence 3344444578999999999999999999995 57899999988642110 334
Q ss_pred ccCCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCC--------
Q 041438 543 SHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDL-------- 614 (752)
Q Consensus 543 ~~~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~-------- 614 (752)
...+..++||||+ +++|.+++..... ..+++..++.++.||+.||+|||+. +|+||||||+|||++.
T Consensus 106 ~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~ 180 (360)
T 3llt_A 106 MYYDHMCLIFEPL-GPSLYEIITRNNY-NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLI 180 (360)
T ss_dssp EETTEEEEEECCC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEE
T ss_pred eECCeeEEEEcCC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcccccccccc
Confidence 4567889999999 8899999986542 3488999999999999999999999 9999999999999975
Q ss_pred -----------------CCceEEeecccceeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCC
Q 041438 615 -----------------GYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 677 (752)
Q Consensus 615 -----------------~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~ 677 (752)
++.+||+|||+|+..... .....||+.|+|||++.+..++.++||||+||++|||++|+.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~ 257 (360)
T 3llt_A 181 TVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSL 257 (360)
T ss_dssp EEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred chhcccccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCC
Confidence 788999999999875432 234579999999999999999999999999999999999999
Q ss_pred CcchhhccccccccchHhhhccCCC--------------------------CCCh----------------hhHHHHHHH
Q 041438 678 PRDFLFEMSSSSSNMNIEILDSRLP--------------------------YPSL----------------DVQNKFMSI 715 (752)
Q Consensus 678 pf~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~----------------~~~~~~~~l 715 (752)
||...... .....+.....+ ++.. ......+.+
T Consensus 258 pf~~~~~~-----~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (360)
T 3llt_A 258 LFRTHEHM-----EHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELF 332 (360)
T ss_dssp SCCCSSHH-----HHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHH
T ss_pred CCCCCcHH-----HHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHH
Confidence 98521110 000000000000 0000 000112567
Q ss_pred HHHHHhccCcCCCCCCCHHHHHHH
Q 041438 716 MQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 716 ~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.+++.+||+.||++|||++|+++|
T Consensus 333 ~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 333 CDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHhcCChhhCCCHHHHhcC
Confidence 899999999999999999999865
No 117
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.7e-37 Score=325.82 Aligned_cols=229 Identities=19% Similarity=0.259 Sum_probs=177.4
Q ss_pred cccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccCCceEEEEE
Q 041438 501 NDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIVYE 553 (752)
Q Consensus 501 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV~E 553 (752)
++|++.+.||+|+||.||+|+. .+++.||||+++..... +++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 5899999999999999999995 57899999998644321 34556788999999
Q ss_pred eccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCC
Q 041438 554 YLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS 633 (752)
Q Consensus 554 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~ 633 (752)
|+++ ++.+.+.... ..+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.++......
T Consensus 82 ~~~~-~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV 155 (292)
T ss_dssp CCSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC
T ss_pred cCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc
Confidence 9987 6666655432 3488999999999999999999999 99999999999999999999999999999876555
Q ss_pred CCcccccCCCCccCccccccCC-CCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhcc-------------
Q 041438 634 SNWSKLAGTHGNVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDS------------- 699 (752)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~-~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~------------- 699 (752)
.......||+.|+|||++.+.. ++.++||||+||++|||++|..||.... ........+...
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~ 231 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN----DVDDQLKRIFRLLGTPTEEQWPSMT 231 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS----SHHHHHHHHHHHHCCCCTTTCTTGG
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC----CHHHHHHHHHHHhCCCChhhhhhhc
Confidence 5555568999999999988766 7999999999999999999988852111 000000000000
Q ss_pred ----CCCCC--------ChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 700 ----RLPYP--------SLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 700 ----~~~~~--------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
..+.+ .......+.++.+++.+||+.||++|||++|+++|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00000 00112345678899999999999999999999875
No 118
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.5e-37 Score=322.99 Aligned_cols=229 Identities=21% Similarity=0.302 Sum_probs=187.4
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccCCceEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV 551 (752)
..++|++.+.||+|+||.||+|+. .+++.||+|++...... +++......++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 467899999999999999999985 56899999988654321 445667788999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCc---eEEeeccccee
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYE---AHVSDFRIAKF 628 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~---~kl~DfG~a~~ 628 (752)
|||+++++|.+.+.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||.+..
T Consensus 84 ~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 84 FDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 99999999988886543 488899999999999999999999 9999999999999986655 99999999987
Q ss_pred ccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhh
Q 041438 629 LNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDV 708 (752)
Q Consensus 629 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (752)
.... .......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.. .........+.......+....
T Consensus 158 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~-----~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T 3kk8_A 158 VNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD-----EDQHRLYAQIKAGAYDYPSPEW 231 (284)
T ss_dssp CCSS-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHTCCCCCTTTT
T ss_pred cccC-ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCC-----CchhHHHHHHHhccccCCchhh
Confidence 6533 233446799999999999999999999999999999999999999852 2222333344444444443333
Q ss_pred HHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 709 QNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 709 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
...++++.+++.+||+.||++|||++|+++|
T Consensus 232 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 232 DTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred cccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 4566789999999999999999999999975
No 119
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.2e-37 Score=339.07 Aligned_cols=231 Identities=23% Similarity=0.365 Sum_probs=185.3
Q ss_pred hhcccccceeeccCCceEEEEEEeC-CCcEEEEEccCCCCCC-------------------------CccccCCceEEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSPLPD-------------------------NFCSHPRQSFIVY 552 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~lV~ 552 (752)
..++|++.+.||+|+||.||+|+.. +++.||||+++..... +++...+..|+||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 4568999999999999999999964 7899999988654211 4455667889999
Q ss_pred EeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCC
Q 041438 553 EYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLD 632 (752)
Q Consensus 553 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~ 632 (752)
||+++|+|.+++...+ ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 192 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp ECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred EcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence 9999999999997543 3488999999999999999999999 9999999999999999999999999999865422
Q ss_pred CCCc--ccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhcc--CCCCCChh
Q 041438 633 SSNW--SKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDS--RLPYPSLD 707 (752)
Q Consensus 633 ~~~~--~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 707 (752)
.... ....+++.|+|||++.+..++.++|||||||++|||+| |+.||.... .......... +.+.+
T Consensus 267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~------~~~~~~~~~~~~~~~~~--- 337 (377)
T 3cbl_A 267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS------NQQTREFVEKGGRLPCP--- 337 (377)
T ss_dssp EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC------HHHHHHHHHTTCCCCCC---
T ss_pred ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcCCCCCCC---
Confidence 1111 11235678999999998889999999999999999998 999985211 1111222222 22222
Q ss_pred hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 708 VQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 708 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
..+++++.+++.+||+.||++|||++++++.|+++.
T Consensus 338 -~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 338 -ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp -TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 234567889999999999999999999999999875
No 120
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.9e-37 Score=329.32 Aligned_cols=232 Identities=19% Similarity=0.270 Sum_probs=166.1
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------------CccccCCceEEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-------------------------NFCSHPRQSFIVY 552 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~lV~ 552 (752)
..++|++.+.||+|+||.||+|+. .+|+.||||+++..... +++...+..++||
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 467899999999999999999984 57899999988643221 3455677899999
Q ss_pred EeccCCChHHHhccCc---cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 553 EYLESGSLDKILNNDA---SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 553 E~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
||+++ +|.+++.... ....+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 99985 9999886532 123488999999999999999999999 9999999999999999999999999999987
Q ss_pred cCCCCCcccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhc----------
Q 041438 630 NLDSSNWSKLAGTHGNVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILD---------- 698 (752)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~---------- 698 (752)
...........||+.|+|||++.+. .++.++||||+||++|||++|+.||..... .+....+.+
T Consensus 159 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~ 233 (317)
T 2pmi_A 159 GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND-----EEQLKLIFDIMGTPNESLW 233 (317)
T ss_dssp TSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCSCCTTTC
T ss_pred CCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHHhCCCChhHh
Confidence 6544444556899999999998764 589999999999999999999999853211 000000000
Q ss_pred ----------cCCC-CCCh---------hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 699 ----------SRLP-YPSL---------DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 699 ----------~~~~-~~~~---------~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.... .+.. .....+.++.+++.+||+.||++|||++|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 234 PSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0000 0000 001234578999999999999999999999976
No 121
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=336.72 Aligned_cols=234 Identities=21% Similarity=0.326 Sum_probs=187.7
Q ss_pred hhcccccceeeccCCceEEEEEEe--------CCCcEEEEEccCCCCCC--------------------------Ccccc
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV--------PSGEIFAVKKFHSPLPD--------------------------NFCSH 544 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~--------------------------~~~~~ 544 (752)
..++|++.+.||+|+||.||+|+. ..++.||||+++..... +++..
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 357899999999999999999984 23467999998654221 44566
Q ss_pred CCceEEEEEeccCCChHHHhccCcc-------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEE
Q 041438 545 PRQSFIVYEYLESGSLDKILNNDAS-------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVL 611 (752)
Q Consensus 545 ~~~~~lV~E~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIl 611 (752)
.+..++||||+++|+|.+++..... ...+++.+++.++.||+.||+|||+. +|+||||||+||+
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence 7789999999999999999986532 23589999999999999999999999 9999999999999
Q ss_pred eCCCCceEEeecccceeccCCCC--CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccc
Q 041438 612 LDLGYEAHVSDFRIAKFLNLDSS--NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSS 688 (752)
Q Consensus 612 l~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~ 688 (752)
+++++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||... .
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~-----~ 298 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-----P 298 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----C
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-----C
Confidence 99999999999999987654322 2233467889999999999999999999999999999999 99998521 1
Q ss_pred cccchHhhhccC-CCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 689 SSNMNIEILDSR-LPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 689 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
..+....+.... ...+ ...++++.+++.+||+.||++|||++|++++|+++.
T Consensus 299 ~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 299 VEELFKLLKEGHRMDKP----SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp HHHHHHHHHTTCCCCCC----SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCC----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 112222222221 1222 234567899999999999999999999999999886
No 122
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.2e-37 Score=338.34 Aligned_cols=234 Identities=24% Similarity=0.411 Sum_probs=175.6
Q ss_pred hcccccceeeccCCceEEEEEEeC----CCcEEEEEccCCCCCC-------------------------CccccCCceEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVP----SGEIFAVKKFHSPLPD-------------------------NFCSHPRQSFI 550 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~l 550 (752)
.++|++.+.||+|+||.||+|+.. ++..||||+++..... +++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 468999999999999999999853 5778999998754221 44556778899
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
||||+++|+|.+++.... ..+++.++..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 124 v~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence 999999999999997643 3488999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCc---ccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhcc-CCCCCC
Q 041438 631 LDSSNW---SKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDS-RLPYPS 705 (752)
Q Consensus 631 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~ 705 (752)
...... ....+++.|+|||++.+..++.++|||||||++|||++ |+.||... ........+... ..+.+
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~-----~~~~~~~~i~~~~~~~~~- 272 (373)
T 2qol_A 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM-----SNQDVIKAVDEGYRLPPP- 272 (373)
T ss_dssp ---------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC-----CHHHHHHHHHTTEECCCC-
T ss_pred cCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHcCCCCCCC-
Confidence 432211 12245778999999999999999999999999999998 99998521 111112222111 11222
Q ss_pred hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcCC
Q 041438 706 LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNP 747 (752)
Q Consensus 706 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 747 (752)
..++..+.+++.+||+.||++||+++|+++.|+++...+
T Consensus 273 ---~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 273 ---MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp ---TTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred ---ccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 234567899999999999999999999999999886543
No 123
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=332.45 Aligned_cols=243 Identities=22% Similarity=0.274 Sum_probs=181.5
Q ss_pred hhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC--------------------C--------ccccCCceEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD--------------------N--------FCSHPRQSFI 550 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------~--------~~~~~~~~~l 550 (752)
..++|++.+.||+|+||.||+|+. +++.||||++...... . ........++
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l 89 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL 89 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence 357899999999999999999976 7899999987532111 1 1122345689
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCC------CCCeeecCCCCCCEEeCCCCceEEeecc
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNC------FPPIVHWDISSKNVLLDLGYEAHVSDFR 624 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~------~~~ivH~DlKp~NIll~~~~~~kl~DfG 624 (752)
||||+++|+|.+++.... .++..+..++.||++||+|||+.+ .++|+||||||+||+++.++.+||+|||
T Consensus 90 v~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 90 VMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp EECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 999999999999997544 578899999999999999999873 2389999999999999999999999999
Q ss_pred cceeccCCCC--------CcccccCCCCccCcccccc-------CCCCCccchhhHHHHHHHHHhCCCCcchhhcccccc
Q 041438 625 IAKFLNLDSS--------NWSKLAGTHGNVAPELAYT-------MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS 689 (752)
Q Consensus 625 ~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~-------~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~ 689 (752)
+++....... ......||+.|+|||++.+ ..+++++|||||||++|||++|..||..........
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 9987653221 1223479999999999876 356789999999999999999988763211111100
Q ss_pred cc------------chHhhhcc---CCCCC--ChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcC
Q 041438 690 SN------------MNIEILDS---RLPYP--SLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYN 746 (752)
Q Consensus 690 ~~------------~~~~~~~~---~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 746 (752)
.. ........ +...+ .......++++.++|.+||+.||++|||++|+++.|+++...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 00 00001111 11111 111234667899999999999999999999999999998633
No 124
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-37 Score=333.71 Aligned_cols=238 Identities=20% Similarity=0.353 Sum_probs=189.6
Q ss_pred HhhcccccceeeccCCceEEEEEEeC------CCcEEEEEccCCCCCC-------------------------CccccCC
Q 041438 498 RATNDFDAKHCIGKGGHGSVYIARVP------SGEIFAVKKFHSPLPD-------------------------NFCSHPR 546 (752)
Q Consensus 498 ~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-------------------------~~~~~~~ 546 (752)
...++|++.+.||+|+||.||+|+.. +++.||||+++..... +++...+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 35688999999999999999999953 4589999998754321 4455678
Q ss_pred ceEEEEEeccCCChHHHhccCcc---------------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCC
Q 041438 547 QSFIVYEYLESGSLDKILNNDAS---------------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDI 605 (752)
Q Consensus 547 ~~~lV~E~~~~g~L~~~l~~~~~---------------------~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~Dl 605 (752)
..++||||+++|+|.+++..... ...+++.+++.++.||++||+|||++ +|+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 89999999999999999976421 14589999999999999999999999 9999999
Q ss_pred CCCCEEeCCCCceEEeecccceeccCCC--CCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchh
Q 041438 606 SSKNVLLDLGYEAHVSDFRIAKFLNLDS--SNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFL 682 (752)
Q Consensus 606 Kp~NIll~~~~~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~ 682 (752)
||+||+++.++.+||+|||+++...... .......+|+.|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 9999999999999999999998654322 11233468899999999998899999999999999999999 99998521
Q ss_pred hccccccccchHhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcC
Q 041438 683 FEMSSSSSNMNIEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYN 746 (752)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 746 (752)
...+....+.+....... ...+.++.+++.+||+.||++|||++|++++|+++...
T Consensus 281 -----~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 281 -----AHEEVIYYVRDGNILACP---ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp -----CHHHHHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred -----ChHHHHHHHhCCCcCCCC---CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 122222333333322111 23456789999999999999999999999999998644
No 125
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=9.5e-38 Score=338.52 Aligned_cols=236 Identities=23% Similarity=0.303 Sum_probs=185.4
Q ss_pred hcccccceeeccCCceEEEEEEe------CCCcEEEEEccCCCCCC-------------------------CccccCCce
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV------PSGEIFAVKKFHSPLPD-------------------------NFCSHPRQS 548 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~ 548 (752)
.++|++.+.||+|+||.||+|+. .+++.||||+++..... +++......
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 46899999999999999999984 25678999998643221 345566788
Q ss_pred EEEEEeccCCChHHHhccCcc----ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCC---ceEEe
Q 041438 549 FIVYEYLESGSLDKILNNDAS----AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGY---EAHVS 621 (752)
Q Consensus 549 ~lV~E~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~---~~kl~ 621 (752)
++||||+++|+|.+++..... ...+++.+++.++.||++||+|||++ +|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 999999999999999976431 23588999999999999999999999 999999999999999554 59999
Q ss_pred ecccceeccCCC--CCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhc
Q 041438 622 DFRIAKFLNLDS--SNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILD 698 (752)
Q Consensus 622 DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 698 (752)
|||+|+...... .......||+.|+|||++.+..++.++|||||||++|||++ |..||... ........+..
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~-----~~~~~~~~i~~ 301 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SNQEVLEFVTS 301 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----CHHHHHHHHHT
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHc
Confidence 999998653221 22233578999999999999999999999999999999998 99998521 11222222222
Q ss_pred cCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcC
Q 041438 699 SRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYN 746 (752)
Q Consensus 699 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 746 (752)
.....+. ...+..+.+++.+||+.||++|||++|++++|+.+...
T Consensus 302 ~~~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 302 GGRMDPP---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp TCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCCCC---ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 2211111 23456788999999999999999999999999887643
No 126
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=5.8e-37 Score=332.09 Aligned_cols=236 Identities=22% Similarity=0.346 Sum_probs=190.9
Q ss_pred hHHHHHHhhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------------------
Q 041438 492 VYEEIIRATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD------------------------------- 539 (752)
Q Consensus 492 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------------------------------- 539 (752)
.++......++|++.+.||+|+||.||+|+. .+|+.||||+++.....
T Consensus 85 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 164 (365)
T 2y7j_A 85 DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164 (365)
T ss_dssp HHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred cchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4455566678899999999999999999996 47999999987543210
Q ss_pred --CccccCCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCc
Q 041438 540 --NFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYE 617 (752)
Q Consensus 540 --~~~~~~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~ 617 (752)
+++......|+||||+++++|.+++... ..+++..+..++.||+.||.|||+. ||+||||||+||+++.++.
T Consensus 165 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ 238 (365)
T 2y7j_A 165 LIDSYESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQ 238 (365)
T ss_dssp EEEEEEBSSEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred EEEEEeeCCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCC
Confidence 3445667889999999999999999753 3488999999999999999999999 9999999999999999999
Q ss_pred eEEeecccceeccCCCCCcccccCCCCccCcccccc------CCCCCccchhhHHHHHHHHHhCCCCcchhhcccccccc
Q 041438 618 AHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT------MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSN 691 (752)
Q Consensus 618 ~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~ 691 (752)
+||+|||++...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.. .....
T Consensus 239 ikl~DfG~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~-----~~~~~ 312 (365)
T 2y7j_A 239 IRLSDFGFSCHLEPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH-----RRQIL 312 (365)
T ss_dssp EEECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCC-----SSHHH
T ss_pred EEEEecCcccccCCC-cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCC-----CCHHH
Confidence 999999999877543 23345689999999998763 3588999999999999999999999852 11222
Q ss_pred chHhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 692 MNIEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
....+.......+.......+..+.+++.+||+.||++|||++|+++|
T Consensus 313 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 313 MLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 333344444444433334456679999999999999999999999875
No 127
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.1e-37 Score=332.76 Aligned_cols=235 Identities=19% Similarity=0.300 Sum_probs=185.0
Q ss_pred HHHHhhcccccc-eeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC---------------------------CccccC
Q 041438 495 EIIRATNDFDAK-HCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD---------------------------NFCSHP 545 (752)
Q Consensus 495 ~~~~~~~~y~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------------------------~~~~~~ 545 (752)
......++|.+. +.||+|+||.||+|+. .+++.||||+++..... +++...
T Consensus 22 ~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~ 101 (327)
T 3lm5_A 22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENT 101 (327)
T ss_dssp CHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred HHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeC
Confidence 344556778887 8999999999999995 47999999988653221 345567
Q ss_pred CceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCC---CCceEEee
Q 041438 546 RQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDL---GYEAHVSD 622 (752)
Q Consensus 546 ~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~---~~~~kl~D 622 (752)
+..++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+. ||+||||||+||+++. ++.+||+|
T Consensus 102 ~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~D 177 (327)
T 3lm5_A 102 SEIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVD 177 (327)
T ss_dssp SEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred CeEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEee
Confidence 88999999999999999986542 24589999999999999999999999 9999999999999987 78999999
Q ss_pred cccceeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCC
Q 041438 623 FRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLP 702 (752)
Q Consensus 623 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 702 (752)
||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.. .........+......
T Consensus 178 fg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~-----~~~~~~~~~i~~~~~~ 251 (327)
T 3lm5_A 178 FGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVG-----EDNQETYLNISQVNVD 251 (327)
T ss_dssp GGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHTCCC
T ss_pred CccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCC-----CCchHHHHHHHhcccc
Confidence 99998765332 23345799999999999999999999999999999999999999852 1122222333333333
Q ss_pred CCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 703 YPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 703 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.+.......++.+.+++.+||+.||++|||++|+++|
T Consensus 252 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 252 YSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred cCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 3333334566778999999999999999999999876
No 128
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=4.1e-36 Score=334.53 Aligned_cols=302 Identities=25% Similarity=0.283 Sum_probs=266.8
Q ss_pred ccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCC
Q 041438 104 SFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFL 183 (752)
Q Consensus 104 ~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 183 (752)
+++.+++|++|+|++|+|+++ | .|+.+++|++|+|++|+|+++ | ++.+++|++|+|++|+|++. | ++++++|
T Consensus 37 ~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L 108 (457)
T 3bz5_A 37 SEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKL 108 (457)
T ss_dssp EHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTC
T ss_pred ChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcC
Confidence 577889999999999999986 4 799999999999999999985 4 89999999999999999975 3 9999999
Q ss_pred cEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEcc
Q 041438 184 NHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVS 263 (752)
Q Consensus 184 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls 263 (752)
++|+|++|++++. | ++++++|++|++++|++++. .++++++|++|++++|+..+.+ .++.+++|+.|+++
T Consensus 109 ~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~----~~~~l~~L~~L~ls 178 (457)
T 3bz5_A 109 TYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL----DVTPQTQLTTLDCS 178 (457)
T ss_dssp CEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC----CCTTCTTCCEEECC
T ss_pred CEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc----ccccCCcCCEEECC
Confidence 9999999999984 4 89999999999999999985 3889999999999999766655 36789999999999
Q ss_pred ccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeecccccccccc
Q 041438 264 INNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFV 343 (752)
Q Consensus 264 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 343 (752)
+|++++. | +..+++|+.|++++|.+++. .++.+++|+.|++++|++++ +| ++.+++|++|++++|++++.+
T Consensus 179 ~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~ 249 (457)
T 3bz5_A 179 FNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD 249 (457)
T ss_dssp SSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC
T ss_pred CCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC
Confidence 9999984 4 88999999999999999976 48899999999999999998 45 889999999999999999988
Q ss_pred chhhcccc-------cccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCc--------ccccccccceEEccC
Q 041438 344 LESLGSLV-------KLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISS--------RICRMESLEKLNLSY 408 (752)
Q Consensus 344 ~~~~~~l~-------~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~--------~~~~l~~L~~L~L~~ 408 (752)
+..+.++. +|+.|++++|++.+.+| +..+++|+.|+|++|.+.+.+|. .+..+++|++|++++
T Consensus 250 ~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~ 327 (457)
T 3bz5_A 250 VSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNN 327 (457)
T ss_dssp CTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTT
T ss_pred HHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCC
Confidence 76666655 56777788887777666 57889999999999987766554 255668999999999
Q ss_pred CcCCcCCchhhhccCCCcEEEccCCcccC
Q 041438 409 NNLSGLIPRCFEELHGLLHIDISYNKLEG 437 (752)
Q Consensus 409 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 437 (752)
|+++++ + +..+++|+.||+++|++++
T Consensus 328 N~l~~l-~--l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 328 TELTEL-D--VSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp CCCSCC-C--CTTCTTCSEEECCSSCCCB
T ss_pred Cccccc-c--cccCCcCcEEECCCCCCCC
Confidence 999996 3 8999999999999999998
No 129
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.8e-37 Score=320.41 Aligned_cols=228 Identities=20% Similarity=0.257 Sum_probs=187.4
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC------------------------CccccCCceEEEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD------------------------NFCSHPRQSFIVYE 553 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------------------------~~~~~~~~~~lV~E 553 (752)
..++|++.+.||+|+||.||+|+. .+++.||+|++...... +++.+....++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 356899999999999999999995 46789999987653221 44566788999999
Q ss_pred eccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEe---CCCCceEEeecccceecc
Q 041438 554 YLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLL---DLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 554 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll---~~~~~~kl~DfG~a~~~~ 630 (752)
|+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||.+....
T Consensus 87 ~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 87 LCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp CCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred ccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 999999999887543 488999999999999999999999 99999999999999 788899999999998765
Q ss_pred CCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHH
Q 041438 631 LDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQN 710 (752)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (752)
... ......||+.|+|||++.+. +++++||||+||++|||++|+.||.. .........+.......+......
T Consensus 161 ~~~-~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 233 (277)
T 3f3z_A 161 PGK-MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSA-----PTDSEVMLKIREGTFTFPEKDWLN 233 (277)
T ss_dssp TTS-CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHCCCCCCHHHHTT
T ss_pred Ccc-chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCC-----CCHHHHHHHHHhCCCCCCchhhhc
Confidence 332 33445799999999987654 89999999999999999999999852 222334444555555555443445
Q ss_pred HHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 711 KFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 711 ~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.++.+.+++.+||+.||++|||+.|+++|
T Consensus 234 ~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 234 VSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 67789999999999999999999999964
No 130
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=3.8e-37 Score=326.38 Aligned_cols=235 Identities=21% Similarity=0.333 Sum_probs=188.2
Q ss_pred hhcccccceeeccCCceEEEEEEe------CCCcEEEEEccCCCCCC-------------------------CccccCCc
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV------PSGEIFAVKKFHSPLPD-------------------------NFCSHPRQ 547 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-------------------------~~~~~~~~ 547 (752)
..++|++.+.||+|+||.||+|+. .+++.||||+++..... +++.+.+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 357899999999999999999984 34589999998754321 34556778
Q ss_pred eEEEEEeccCCChHHHhccCcc---------------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCC
Q 041438 548 SFIVYEYLESGSLDKILNNDAS---------------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDIS 606 (752)
Q Consensus 548 ~~lV~E~~~~g~L~~~l~~~~~---------------------~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlK 606 (752)
.++||||+++|+|.+++..... ...+++.+++.++.||+.||+|||++ +|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccc
Confidence 9999999999999999986432 13488999999999999999999999 99999999
Q ss_pred CCCEEeCCCCceEEeecccceeccCCCCC--cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhh
Q 041438 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLF 683 (752)
Q Consensus 607 p~NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~ 683 (752)
|+||+++.++.+||+|||+++........ .....+|+.|+|||++.+..++.++||||+||++|||++ |+.||...
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~- 256 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI- 256 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC-
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC-
Confidence 99999999999999999999876543321 223467788999999999889999999999999999999 99998521
Q ss_pred ccccccccchHhhhccC-CCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 684 EMSSSSSNMNIEILDSR-LPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 684 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
........+.... ...+ ...++++.+++.+||+.||++|||++|++++|+++..
T Consensus 257 ----~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 257 ----PPERLFNLLKTGHRMERP----DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp ----CGGGHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHhhcCCcCCCC----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1122222222221 1122 3455678999999999999999999999999998754
No 131
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=9.8e-38 Score=338.32 Aligned_cols=235 Identities=19% Similarity=0.203 Sum_probs=179.9
Q ss_pred hhcccccceeeccCCceEEEEEEeCC------CcEEEEEccCCCCCC---------------------------------
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPS------GEIFAVKKFHSPLPD--------------------------------- 539 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~--------------------------------- 539 (752)
..++|++.+.||+|+||.||+|+... ++.||||++......
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 45689999999999999999998644 478999987543210
Q ss_pred --Ccccc----CCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeC
Q 041438 540 --NFCSH----PRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLD 613 (752)
Q Consensus 540 --~~~~~----~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~ 613 (752)
+++.+ ....|+||||+ +++|.+++.... ..+++.+++.++.||+.||+|||+. +|+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence 11111 14479999999 889999997643 3589999999999999999999999 999999999999998
Q ss_pred --CCCceEEeecccceeccCCCCC-------cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhc
Q 041438 614 --LGYEAHVSDFRIAKFLNLDSSN-------WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFE 684 (752)
Q Consensus 614 --~~~~~kl~DfG~a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~ 684 (752)
.++.+||+|||+++.+...... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.....
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~ 266 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK 266 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 8899999999999876533211 1234599999999999999999999999999999999999999963211
Q ss_pred cccccc-------cchHhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 685 MSSSSS-------NMNIEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 685 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
...... .......+...+. ...+.++.+++..||+.||++||+++++++.|+++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 267 DPKYVRDSKIRYRENIASLMDKCFPA-----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHSCT-----TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhhHHHHHHHhccc-----ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 000000 0001111111100 123567899999999999999999999999998775
No 132
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=323.02 Aligned_cols=227 Identities=22% Similarity=0.370 Sum_probs=161.7
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCC------C---------------------CccccCCceEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLP------D---------------------NFCSHPRQSFI 550 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~---------------------~~~~~~~~~~l 550 (752)
..++|++.+.||+|+||.||+|+. .+|+.||||++..... . +++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 457899999999999999999995 6799999998753210 0 34556788899
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
||||+++++|.+++.... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 89 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EEECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 999999999999997643 3588999999999999999999999 99999999999999999999999999998875
Q ss_pred CCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHH
Q 041438 631 LDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQN 710 (752)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (752)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.......+ ..
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~----~~ 234 (278)
T 3cok_A 164 MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDT-----VKNTLNKVVLADYEMP----SF 234 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCS-----CC-----CCSSCCCCC----TT
T ss_pred CCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChh-----HHHHHHHHhhcccCCc----cc
Confidence 44433444679999999999998889999999999999999999999985211 1111122222222222 22
Q ss_pred HHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 711 KFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 711 ~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.+.++.+++.+||+.||++|||++|+++|
T Consensus 235 ~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 235 LSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 45578899999999999999999999875
No 133
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.7e-37 Score=328.43 Aligned_cols=232 Identities=25% Similarity=0.342 Sum_probs=180.8
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcE----EEEEccCCCCCC-------------------------CccccCCceE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEI----FAVKKFHSPLPD-------------------------NFCSHPRQSF 549 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~~~-------------------------~~~~~~~~~~ 549 (752)
.++|++.+.||+|+||.||+|+. .+++. ||+|.+...... +++ .....+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEE-CBSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEE-cCCccE
Confidence 46899999999999999999984 45554 788876433211 222 246688
Q ss_pred EEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 550 lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
+||||+.+|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEEECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred EEEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccccc
Confidence 9999999999999997643 3588899999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCC--CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhcc-CCCCCC
Q 041438 630 NLDSS--NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDS-RLPYPS 705 (752)
Q Consensus 630 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~ 705 (752)
..... ......||..|+|||++.+..++.++|||||||++|||+| |+.||... ........+... ....+
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~- 239 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL-----RLAEVPDLLEKGERLAQP- 239 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS-----CTTHHHHHHHTTCBCCCC-
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCcccc-----CHHHHHHHHHcCCCCCCC-
Confidence 54332 2234568889999999999999999999999999999999 99998521 111222222222 12222
Q ss_pred hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcC
Q 041438 706 LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYN 746 (752)
Q Consensus 706 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 746 (752)
...+.++.+++.+||+.||++|||++|++++|+++...
T Consensus 240 ---~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 240 ---QICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp ---TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred ---CcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 22344678899999999999999999999999987643
No 134
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=326.50 Aligned_cols=230 Identities=26% Similarity=0.323 Sum_probs=176.7
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------------CccccC
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------------NFCSHP 545 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------------~~~~~~ 545 (752)
..++|++.+.||+|+||.||+|+. .+++.||||+++..... +++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467999999999999999999994 67999999988632210 122222
Q ss_pred C-----ceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEE
Q 041438 546 R-----QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHV 620 (752)
Q Consensus 546 ~-----~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl 620 (752)
. ..++||||+.+ +|.+++..... ..+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~~-~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVDQ-DLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCCC-BHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhhc-CHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEE
Confidence 2 47999999985 99999976543 3489999999999999999999999 9999999999999999999999
Q ss_pred eecccceeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhc--
Q 041438 621 SDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILD-- 698 (752)
Q Consensus 621 ~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~-- 698 (752)
+|||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+..
T Consensus 162 ~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~ 235 (308)
T 3g33_A 162 ADFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE-----ADQLGKIFDLI 235 (308)
T ss_dssp CSCSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH-----HHHHHHHHHHH
T ss_pred eeCccccccCCC-cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHh
Confidence 999999876533 333456899999999999999999999999999999999999999852211 011111100
Q ss_pred --------------------cCCCCC-ChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 699 --------------------SRLPYP-SLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 699 --------------------~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
...+.+ .......++++.+++.+||+.||++|||++|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 236 GLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 000000 00112345678899999999999999999999875
No 135
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=335.47 Aligned_cols=224 Identities=19% Similarity=0.205 Sum_probs=178.9
Q ss_pred cceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC------------------------CccccCCceEEEEEeccCCC
Q 041438 505 AKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD------------------------NFCSHPRQSFIVYEYLESGS 559 (752)
Q Consensus 505 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------------------------~~~~~~~~~~lV~E~~~~g~ 559 (752)
..+.||+|+||.||+|+. .+|+.||+|+++..... +++...+..++||||+++|+
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 367899999999999985 57999999988653211 45566788999999999999
Q ss_pred hHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEe--CCCCceEEeecccceeccCCCCCcc
Q 041438 560 LDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLL--DLGYEAHVSDFRIAKFLNLDSSNWS 637 (752)
Q Consensus 560 L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll--~~~~~~kl~DfG~a~~~~~~~~~~~ 637 (752)
|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++...... ...
T Consensus 173 L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~-~~~ 246 (373)
T 2x4f_A 173 LFDRIIDES--YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-KLK 246 (373)
T ss_dssp EHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-BCC
T ss_pred HHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-ccc
Confidence 999886543 3488999999999999999999999 99999999999999 567889999999999875332 333
Q ss_pred cccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHHHHHHHH
Q 041438 638 KLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKFMSIMQ 717 (752)
Q Consensus 638 ~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 717 (752)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.. .........+.......+.......++++.+
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 321 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG-----DNDAETLNNILACRWDLEDEEFQDISEEAKE 321 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCC-----SSHHHHHHHHHHTCCCSCSGGGTTSCHHHHH
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCC-----CCHHHHHHHHHhccCCCChhhhccCCHHHHH
Confidence 45799999999999988899999999999999999999999852 1222334445555554444444556778999
Q ss_pred HHHhccCcCCCCCCCHHHHHHH
Q 041438 718 VAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 718 li~~cl~~dP~~Rps~~evl~~ 739 (752)
+|.+||+.||++|||++|+++|
T Consensus 322 li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 322 FISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp HHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHcCCChhhCCCHHHHhcC
Confidence 9999999999999999999975
No 136
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.9e-36 Score=330.03 Aligned_cols=307 Identities=22% Similarity=0.180 Sum_probs=270.3
Q ss_pred EEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCc
Q 041438 88 GINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRN 167 (752)
Q Consensus 88 ~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 167 (752)
.+++.++.+. .+++..|..+++|++|+|++|+++++.+..|+++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 49 ~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 127 (390)
T 3o6n_A 49 IVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERN 127 (390)
T ss_dssp EEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCC
Confidence 3444444433 355556889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCC
Q 041438 168 QLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPL 247 (752)
Q Consensus 168 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 247 (752)
+|+...+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++. .++.+++|+.+++++|.+++.
T Consensus 128 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~--- 201 (390)
T 3o6n_A 128 DLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL--- 201 (390)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE---
T ss_pred ccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc---
Confidence 99976666789999999999999999999999999999999999999999875 356778899999999998853
Q ss_pred CCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCc
Q 041438 248 SIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLI 327 (752)
Q Consensus 248 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 327 (752)
...++|+.|++++|.++.. |.. ..++|++|++++|.+++. ..+..+++|+.|++++|.+++..|..|..++
T Consensus 202 ----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 272 (390)
T 3o6n_A 202 ----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQ 272 (390)
T ss_dssp ----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCS
T ss_pred ----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccc
Confidence 2346899999999999865 332 357999999999999864 5789999999999999999999999999999
Q ss_pred ccceeeccccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEcc
Q 041438 328 NLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLS 407 (752)
Q Consensus 328 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 407 (752)
+|++|+|++|+++++ +..+..+++|++|+|++|+++ .+|..+..+++|++|+|++|.++... +..+++|+.|+++
T Consensus 273 ~L~~L~L~~n~l~~~-~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~~L~l~ 347 (390)
T 3o6n_A 273 RLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLS 347 (390)
T ss_dssp SCCEEECCSSCCCEE-ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECC
T ss_pred cCCEEECCCCcCccc-CcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC---chhhccCCEEEcC
Confidence 999999999999986 455678999999999999998 56777899999999999999998763 6778999999999
Q ss_pred CCcCCcCC
Q 041438 408 YNNLSGLI 415 (752)
Q Consensus 408 ~N~l~~~~ 415 (752)
+|++++..
T Consensus 348 ~N~~~~~~ 355 (390)
T 3o6n_A 348 HNDWDCNS 355 (390)
T ss_dssp SSCEEHHH
T ss_pred CCCccchh
Confidence 99998753
No 137
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-37 Score=330.65 Aligned_cols=239 Identities=21% Similarity=0.280 Sum_probs=186.4
Q ss_pred hhcccccceeeccCCceEEEEEEe------CCCcEEEEEccCCCCCC--------------------------CccccCC
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV------PSGEIFAVKKFHSPLPD--------------------------NFCSHPR 546 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~--------------------------~~~~~~~ 546 (752)
..++|++.+.||+|+||.||+|+. .+++.||||+++..... +++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 457899999999999999999985 24668999998643211 3455667
Q ss_pred ceEEEEEeccCCChHHHhccCccc--------------------cccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCC
Q 041438 547 QSFIVYEYLESGSLDKILNNDASA--------------------KELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDIS 606 (752)
Q Consensus 547 ~~~lV~E~~~~g~L~~~l~~~~~~--------------------~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlK 606 (752)
..++||||+++|+|.+++...... ..+++..++.++.||+.||+|||+. ||+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 899999999999999999765321 2378999999999999999999999 99999999
Q ss_pred CCCEEeCCCCceEEeecccceeccCCCCC--cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhh
Q 041438 607 SKNVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLF 683 (752)
Q Consensus 607 p~NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~ 683 (752)
|+||+++.++.+||+|||++......... .....||+.|+|||++.+..+++++|||||||++|||+| |..||...
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~- 278 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI- 278 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC-
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC-
Confidence 99999999999999999999876543322 223467889999999999999999999999999999998 99998522
Q ss_pred ccccccccchHhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcCC
Q 041438 684 EMSSSSSNMNIEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNP 747 (752)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 747 (752)
................+. ....++++.+++.+||+.||++|||++|++++|+.+....
T Consensus 279 ----~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 279 ----PVDANFYKLIQNGFKMDQ--PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp ----CCSHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred ----CcHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 111122222222222111 1234567899999999999999999999999999986554
No 138
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1e-37 Score=330.51 Aligned_cols=234 Identities=24% Similarity=0.335 Sum_probs=174.3
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC---------------------------CccccCC----c
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD---------------------------NFCSHPR----Q 547 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------------------------~~~~~~~----~ 547 (752)
.++|++.+.||+|+||.||+|+. .+++.||||+++..... +++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 57899999999999999999994 68999999998754321 1111111 2
Q ss_pred eEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccce
Q 041438 548 SFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAK 627 (752)
Q Consensus 548 ~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~ 627 (752)
.|+||||+++++|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred cEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence 499999999999999997543 488999999999999999999999 99999999999999999999999999998
Q ss_pred eccCCCC---CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCC
Q 041438 628 FLNLDSS---NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYP 704 (752)
Q Consensus 628 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (752)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||... ................+
T Consensus 165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~-----~~~~~~~~~~~~~~~~~ 239 (311)
T 3ork_A 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD-----SPVSVAYQHVREDPIPP 239 (311)
T ss_dssp -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHHCCCCCH
T ss_pred cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHhcCCCCCc
Confidence 7653322 122347899999999999999999999999999999999999998521 11222222333222222
Q ss_pred ChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHH-HHHhhhh
Q 041438 705 SLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFE-VQSKQFH 744 (752)
Q Consensus 705 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl-~~L~~~~ 744 (752)
.......+.++.+++.+||+.||++||++.+++ ..+.+..
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 240 SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 212234566799999999999999999666655 4555443
No 139
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=8.2e-39 Score=337.34 Aligned_cols=241 Identities=23% Similarity=0.305 Sum_probs=170.8
Q ss_pred hcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-----------------------CccccCC----ceEEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-----------------------NFCSHPR----QSFIVY 552 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------------~~~~~~~----~~~lV~ 552 (752)
.++|++.+.||+|+||.||+|+. +++.||||++...... +++.... ..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 80 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEE-cCcceEEEEecccchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEE
Confidence 36899999999999999999986 5899999998643211 1222222 679999
Q ss_pred EeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHH--------hCCCCCeeecCCCCCCEEeCCCCceEEeecc
Q 041438 553 EYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH--------NNCFPPIVHWDISSKNVLLDLGYEAHVSDFR 624 (752)
Q Consensus 553 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH--------~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG 624 (752)
||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||
T Consensus 81 e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DFg 153 (303)
T 3gxj_A 81 DYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp ECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCC
T ss_pred eccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeecC
Confidence 999999999999654 3788899999999999999999 87 99999999999999999999999999
Q ss_pred cceeccCCCCC----cccccCCCCccCccccccC------CCCCccchhhHHHHHHHHHhC----------CCCcchhhc
Q 041438 625 IAKFLNLDSSN----WSKLAGTHGNVAPELAYTM------KVTEKCDVYSFGVLALEVIKG----------KHPRDFLFE 684 (752)
Q Consensus 625 ~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~ksDIwSlGvil~elltg----------~~pf~~~~~ 684 (752)
+++........ .....||+.|+|||++.+. .+++++|||||||++|||+|| +.||.....
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~ 233 (303)
T 3gxj_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp C-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC
T ss_pred cceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCC
Confidence 99876543322 1234799999999998776 344689999999999999999 666642222
Q ss_pred cccccccchHhhhccCCC--CCC-hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcCCC
Q 041438 685 MSSSSSNMNIEILDSRLP--YPS-LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPD 748 (752)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 748 (752)
...........+...... .+. ......++.+.+++.+||+.||++|||++|+++.|+++....+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~~ 300 (303)
T 3gxj_A 234 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp -CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC--
T ss_pred CCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhcc
Confidence 122222233333332222 111 1123566789999999999999999999999999999876554
No 140
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.3e-37 Score=321.71 Aligned_cols=223 Identities=19% Similarity=0.273 Sum_probs=161.2
Q ss_pred hcccccceeeccCCceEEEEEE-eCCCcEEEEEccCCCCCC---------------------------CccccCCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVKKFHSPLPD---------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---------------------------~~~~~~~~~~lV 551 (752)
.++|++.+.||+|+||.||+|+ ..+++.||+|++...... +++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 4689999999999999999998 467999999998654211 345567789999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
|||+ ++++.+++.... .+++.+++.++.|++.||+|||+. ||+||||||+||++++++.+||+|||.+.....
T Consensus 92 ~e~~-~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 92 IEYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp EECC-CEEHHHHHHTSS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred ehhc-CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 9999 558888876543 488999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCCcccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHH
Q 041438 632 DSSNWSKLAGTHGNVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQN 710 (752)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (752)
.. ......||+.|+|||++.+..+ ++++||||+||++|||++|+.||.. .........+.......+. .
T Consensus 165 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~-----~~~~~~~~~~~~~~~~~~~----~ 234 (275)
T 2eue_A 165 GN-FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-----ESIPVLFKNISNGVYTLPK----F 234 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHTCCCCCT----T
T ss_pred cc-cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCC-----CCHHHHHHHHHhCCCCCCc----c
Confidence 32 2334579999999999887765 7899999999999999999999852 1222233344444444442 3
Q ss_pred HHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 711 KFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 711 ~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.++.+.+++.+||+.||++|||++|+++|
T Consensus 235 ~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 235 LSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred CCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 45678899999999999999999999875
No 141
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.7e-37 Score=344.39 Aligned_cols=224 Identities=23% Similarity=0.350 Sum_probs=185.7
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCC---C------------------------CccccCCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLP---D------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~------------------------~~~~~~~~~~lV 551 (752)
.++|++.+.||+|+||.||+|+. .+|+.||||++..... . +++......|+|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 47899999999999999999995 4799999998753210 0 445667889999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
|||+++|+|.+++...+ .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 95 ~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 95 MEYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp EECCSSEEHHHHTTSSS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 99999999999997543 488999999999999999999999 999999999999999999999999999988653
Q ss_pred CCCCcccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHH
Q 041438 632 DSSNWSKLAGTHGNVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQN 710 (752)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (752)
. ......+||+.|+|||++.+..+ ++++||||+||++|||++|+.||+. .........+.+.....+. .
T Consensus 169 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~-----~~~~~~~~~i~~~~~~~p~----~ 238 (476)
T 2y94_A 169 G-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD-----DHVPTLFKKICDGIFYTPQ----Y 238 (476)
T ss_dssp T-CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCC-----SSSHHHHHHHHTTCCCCCT----T
T ss_pred c-ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCC-----CCHHHHHHHHhcCCcCCCc----c
Confidence 3 33345689999999999988775 7899999999999999999999862 2223334445554444442 2
Q ss_pred HHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 711 KFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 711 ~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.++++.+++.+||+.||++|||++|+++|
T Consensus 239 ~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 239 LNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp CCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 44578899999999999999999999975
No 142
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.4e-37 Score=331.47 Aligned_cols=236 Identities=24% Similarity=0.250 Sum_probs=186.0
Q ss_pred HHHhhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCC-----C------------------------CccccC
Q 041438 496 IIRATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLP-----D------------------------NFCSHP 545 (752)
Q Consensus 496 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~------------------------~~~~~~ 545 (752)
+....++|++.+.||+|+||.||+|+. .+++.||+|++..... . +++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 345678899999999999999999995 5788999998753210 0 455677
Q ss_pred CceEEEEEeccCCChHHHhccCc-------------------------------------cccccCHHHHHHHHHHHHHH
Q 041438 546 RQSFIVYEYLESGSLDKILNNDA-------------------------------------SAKELGWTQRLNVIKGVADA 588 (752)
Q Consensus 546 ~~~~lV~E~~~~g~L~~~l~~~~-------------------------------------~~~~l~~~~~~~i~~qi~~a 588 (752)
+..++||||+++|+|.+++.... ....+++..++.++.||+.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 88999999999999999985211 01224677889999999999
Q ss_pred HHHHHhCCCCCeeecCCCCCCEEeCCCC--ceEEeecccceeccCCCC----CcccccCCCCccCcccccc--CCCCCcc
Q 041438 589 LFYLHNNCFPPIVHWDISSKNVLLDLGY--EAHVSDFRIAKFLNLDSS----NWSKLAGTHGNVAPELAYT--MKVTEKC 660 (752)
Q Consensus 589 L~~lH~~~~~~ivH~DlKp~NIll~~~~--~~kl~DfG~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~ks 660 (752)
|+|||+. +|+||||||+||+++.++ .+||+|||+++....... ......||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998766 899999999987643221 1234579999999999875 6789999
Q ss_pred chhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 661 DVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 661 DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
|||||||++|||++|+.||.. .........+.......+.......++++.+++.+||+.||++||++.|+++|
T Consensus 258 DiwslG~il~el~~g~~pf~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPG-----VNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred HHHHHHHHHHHHHHCCCCCCC-----CChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 999999999999999999852 12223344555555555444445567789999999999999999999999986
No 143
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3e-37 Score=333.74 Aligned_cols=232 Identities=22% Similarity=0.261 Sum_probs=175.1
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-----------------------CccccCCceEEEEEe
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-----------------------NFCSHPRQSFIVYEY 554 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~lV~E~ 554 (752)
..++|++.+.||+|+||.||+|+. .+++.||||++...... +++......++||||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 457899999999999999999995 47999999998654321 445567889999999
Q ss_pred ccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCc--eEEeecccceeccCC
Q 041438 555 LESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYE--AHVSDFRIAKFLNLD 632 (752)
Q Consensus 555 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~--~kl~DfG~a~~~~~~ 632 (752)
+++|+|.+++...+ .+++..++.++.|++.||+|||++ ||+||||||+||+++.++. +||+|||+++.....
T Consensus 98 ~~~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~ 171 (361)
T 3uc3_A 98 ASGGELYERICNAG---RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 171 (361)
T ss_dssp CCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence 99999999986543 488999999999999999999999 9999999999999987765 999999999854322
Q ss_pred CCCcccccCCCCccCccccccCCCCCc-cchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHH
Q 041438 633 SSNWSKLAGTHGNVAPELAYTMKVTEK-CDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNK 711 (752)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~~~k-sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (752)
.......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||...... .........+.......+. ....
T Consensus 172 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~ 247 (361)
T 3uc3_A 172 -SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP-RDYRKTIQRILSVKYSIPD--DIRI 247 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C-CCHHHHHHHHHTTCCCCCT--TSCC
T ss_pred -CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH-HHHHHHHHHHhcCCCCCCC--cCCC
Confidence 22334579999999999988877655 89999999999999999999632211 1111222333333333332 1234
Q ss_pred HHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 041438 712 FMSIMQVAFSCLDQNPVSRPTMKRFEVQS 740 (752)
Q Consensus 712 ~~~l~~li~~cl~~dP~~Rps~~evl~~L 740 (752)
++++.++|.+||+.||++|||++|+++|-
T Consensus 248 s~~~~~li~~~L~~dP~~Rps~~ell~hp 276 (361)
T 3uc3_A 248 SPECCHLISRIFVADPATRISIPEIKTHS 276 (361)
T ss_dssp CHHHHHHHHHHSCSCTTTSCCHHHHHTSH
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHhCc
Confidence 56788999999999999999999999873
No 144
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.9e-37 Score=348.00 Aligned_cols=233 Identities=21% Similarity=0.302 Sum_probs=188.2
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC---------------------------CccccCCceEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD---------------------------NFCSHPRQSFI 550 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------------------------~~~~~~~~~~l 550 (752)
..++|++.+.||+|+||.||+|+. .+|+.||||++.+.... .++......|+
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence 357899999999999999999996 57999999988532100 34456788999
Q ss_pred EEEeccCCChHHHhccCcc-ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 551 VYEYLESGSLDKILNNDAS-AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
||||+++|+|.+++..... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 9999999999999876432 34589999999999999999999999 9999999999999999999999999999987
Q ss_pred cCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhH
Q 041438 630 NLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQ 709 (752)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (752)
..........+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..........+.......+ .
T Consensus 340 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~-~~~~~~~~~~i~~~~~~~p----~ 414 (543)
T 3c4z_A 340 KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE-KVENKELKQRVLEQAVTYP----D 414 (543)
T ss_dssp CTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTC-CCCHHHHHHHHHHCCCCCC----T
T ss_pred cCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCcc-chhHHHHHHHHhhcccCCC----c
Confidence 6544444456899999999999999999999999999999999999999963211 0111223344445444444 2
Q ss_pred HHHHHHHHHHHhccCcCCCCCCCH-----HHHHHH
Q 041438 710 NKFMSIMQVAFSCLDQNPVSRPTM-----KRFEVQ 739 (752)
Q Consensus 710 ~~~~~l~~li~~cl~~dP~~Rps~-----~evl~~ 739 (752)
..+.++.++|.+||+.||++||++ +|+++|
T Consensus 415 ~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 415 KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred ccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 345678899999999999999975 566643
No 145
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=328.67 Aligned_cols=228 Identities=14% Similarity=0.196 Sum_probs=171.4
Q ss_pred cccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------------CccccCCceEEEEEe
Q 041438 501 NDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-------------------------NFCSHPRQSFIVYEY 554 (752)
Q Consensus 501 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~lV~E~ 554 (752)
++|++.+.||+|+||.||+|+. .+++.||||++...... +++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 5799999999999999999995 47899999988643211 345567788999999
Q ss_pred ccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCCC
Q 041438 555 LESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSS 634 (752)
Q Consensus 555 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~ 634 (752)
+++ +|.+++.... ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 155 (324)
T 3mtl_A 82 LDK-DLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 155 (324)
T ss_dssp CSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred ccc-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCcc
Confidence 985 9999887654 3488899999999999999999999 999999999999999999999999999987654444
Q ss_pred CcccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhc---------------
Q 041438 635 NWSKLAGTHGNVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILD--------------- 698 (752)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~--------------- 698 (752)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... .+....+..
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~ 230 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV-----EEQLHFIFRILGTPTEETWPGILS 230 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCChHhchhhhc
Confidence 4455688999999999876 5689999999999999999999999853211 000000000
Q ss_pred ------cCCC---CC--ChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 699 ------SRLP---YP--SLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 699 ------~~~~---~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
...+ .. .......++++.+++.+||+.||++|||++|+++|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 231 NEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp CHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred chhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000 00 00112234678899999999999999999999975
No 146
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=4.7e-37 Score=327.30 Aligned_cols=238 Identities=18% Similarity=0.297 Sum_probs=172.0
Q ss_pred HhhcccccceeeccCCceEEEEEEeCC-Cc---EEEEEccCCCCCC--------------------------CccccCCc
Q 041438 498 RATNDFDAKHCIGKGGHGSVYIARVPS-GE---IFAVKKFHSPLPD--------------------------NFCSHPRQ 547 (752)
Q Consensus 498 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~---~vavK~~~~~~~~--------------------------~~~~~~~~ 547 (752)
...++|++.+.||+|+||.||+|+... ++ .||||+++..... +++.....
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 356789999999999999999998543 32 7999998654211 22222222
Q ss_pred ------eEEEEEeccCCChHHHhccCcc---ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCce
Q 041438 548 ------SFIVYEYLESGSLDKILNNDAS---AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEA 618 (752)
Q Consensus 548 ------~~lV~E~~~~g~L~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~ 618 (752)
.++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+. +|+||||||+||++++++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 3899999999999999865321 12588999999999999999999999 99999999999999999999
Q ss_pred EEeecccceeccCCCCC--cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHh
Q 041438 619 HVSDFRIAKFLNLDSSN--WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIE 695 (752)
Q Consensus 619 kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~ 695 (752)
||+|||+++........ .....+++.|+|||.+.+..++.++|||||||++|||++ |+.||... ........
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~-----~~~~~~~~ 251 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI-----ENAEIYNY 251 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----CGGGHHHH
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCcccc-----ChHHHHHH
Confidence 99999999876433221 123356788999999999999999999999999999999 99998521 12222222
Q ss_pred hhccC-CCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcCC
Q 041438 696 ILDSR-LPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNP 747 (752)
Q Consensus 696 ~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 747 (752)
+.... ...+ ...++++.+++.+||+.||++|||+.|+++.|+++...|
T Consensus 252 ~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 252 LIGGNRLKQP----PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp HHTTCCCCCC----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HhcCCCCCCC----CccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 33222 2222 334567899999999999999999999999999986554
No 147
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=9.3e-37 Score=319.19 Aligned_cols=230 Identities=25% Similarity=0.348 Sum_probs=179.2
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------------------CccccCC
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-------------------------------NFCSHPR 546 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------------~~~~~~~ 546 (752)
..++|++.+.||+|+||.||+|+. .+++.||||++...... +++ ..
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~--~~ 94 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM--HN 94 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEE--TT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheee--cC
Confidence 357899999999999999999995 57999999988543221 111 23
Q ss_pred ceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCC--eeecCCCCCCEEeCCCCc-----eE
Q 041438 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP--IVHWDISSKNVLLDLGYE-----AH 619 (752)
Q Consensus 547 ~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~--ivH~DlKp~NIll~~~~~-----~k 619 (752)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. + |+||||||+||+++.++. +|
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 95 PPRMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp TTEEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred CCeEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEE
Confidence 3479999999999998886543 3588999999999999999999999 8 999999999999987776 99
Q ss_pred EeecccceeccCCCCCcccccCCCCccCccccc--cCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhh
Q 041438 620 VSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAY--TMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEIL 697 (752)
Q Consensus 620 l~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 697 (752)
|+|||+++.... ......||+.|+|||++. ...+++++||||+||++|||++|+.||.... .........+.
T Consensus 170 l~Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~---~~~~~~~~~~~ 243 (287)
T 4f0f_A 170 VADFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS---YGKIKFINMIR 243 (287)
T ss_dssp ECCCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC---CCHHHHHHHHH
T ss_pred eCCCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc---ccHHHHHHHHh
Confidence 999999985432 234468999999999984 4557899999999999999999999985211 11111112222
Q ss_pred ccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhh
Q 041438 698 DSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQF 743 (752)
Q Consensus 698 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 743 (752)
....... .....++++.+++.+||+.||++|||++|+++.|+++
T Consensus 244 ~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 244 EEGLRPT--IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HSCCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ccCCCCC--CCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 2222111 1134566789999999999999999999999999874
No 148
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.8e-37 Score=337.80 Aligned_cols=228 Identities=21% Similarity=0.305 Sum_probs=166.4
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC---------------------------Cccc--cCCce
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD---------------------------NFCS--HPRQS 548 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------------------------~~~~--~~~~~ 548 (752)
..++|++.+.||+|+||.||+|+. .+|+.||||++...... +++. .....
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 467899999999999999999984 67999999988543221 2222 23468
Q ss_pred EEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeeccccee
Q 041438 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKF 628 (752)
Q Consensus 549 ~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~ 628 (752)
|+|||||++ +|.+++... .+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+|+.
T Consensus 87 ~lv~e~~~~-~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 87 YLVFDYMET-DLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp EEEEECCSE-EHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEecccCc-CHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 999999985 999998753 388899999999999999999999 999999999999999999999999999987
Q ss_pred ccCC---------------------CCCcccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCcchhhccc
Q 041438 629 LNLD---------------------SSNWSKLAGTHGNVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMS 686 (752)
Q Consensus 629 ~~~~---------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~ 686 (752)
.... .......+||+.|+|||++.+ ..++.++||||+||++|||++|++||......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~- 237 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM- 237 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 5321 111234589999999999886 56899999999999999999999999532110
Q ss_pred cccccchHhhhcc-------------------------------CCCCCC--hh----------hHHHHHHHHHHHHhcc
Q 041438 687 SSSSNMNIEILDS-------------------------------RLPYPS--LD----------VQNKFMSIMQVAFSCL 723 (752)
Q Consensus 687 ~~~~~~~~~~~~~-------------------------------~~~~~~--~~----------~~~~~~~l~~li~~cl 723 (752)
.....+... ...... .. ....++++.+++.+||
T Consensus 238 ----~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L 313 (388)
T 3oz6_A 238 ----NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLL 313 (388)
T ss_dssp ----HHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHC
T ss_pred ----HHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhh
Confidence 000011000 000000 00 0023457899999999
Q ss_pred CcCCCCCCCHHHHHHH
Q 041438 724 DQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 724 ~~dP~~Rps~~evl~~ 739 (752)
+.||++|||++|+++|
T Consensus 314 ~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 314 QFNPNKRISANDALKH 329 (388)
T ss_dssp CSSGGGSCCHHHHTTS
T ss_pred ccCcccCCCHHHHhCC
Confidence 9999999999999988
No 149
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=5.8e-37 Score=342.26 Aligned_cols=237 Identities=17% Similarity=0.243 Sum_probs=186.4
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-----------------------CccccCCceEEEEEec
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-----------------------NFCSHPRQSFIVYEYL 555 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~lV~E~~ 555 (752)
.++|++.++||+|+||.||+|+. .+++.||||++...... .++...+..++||||+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~ 85 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL 85 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence 57899999999999999999994 67999999986543221 2344567789999999
Q ss_pred cCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEe---CCCCceEEeecccceeccCC
Q 041438 556 ESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLL---DLGYEAHVSDFRIAKFLNLD 632 (752)
Q Consensus 556 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll---~~~~~~kl~DfG~a~~~~~~ 632 (752)
+++|.+++.... ..+++.+++.|+.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 86 -g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 86 -GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp -CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred -CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 889999997533 3489999999999999999999999 99999999999999 58889999999999987644
Q ss_pred CCC-------cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCC
Q 041438 633 SSN-------WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPS 705 (752)
Q Consensus 633 ~~~-------~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (752)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .........+.........
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~--~~~~~~~~~i~~~~~~~~~ 237 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA--GTKKQKYEKISEKKVATSI 237 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC--SSHHHHHHHHHHHHHHSCH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc--hhHHHHHHHHhhccccccH
Confidence 322 1245799999999999999999999999999999999999999963211 0111111122111111110
Q ss_pred -hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 706 -LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 706 -~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
.....++.++.+++.+||+.||++||+++++++.|+++.
T Consensus 238 ~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~ 277 (483)
T 3sv0_A 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF 277 (483)
T ss_dssp HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 011234567899999999999999999999999998874
No 150
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=7.3e-37 Score=328.42 Aligned_cols=242 Identities=23% Similarity=0.296 Sum_probs=186.7
Q ss_pred hhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-----------------------CccccCC----ceEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-----------------------NFCSHPR----QSFIV 551 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------------~~~~~~~----~~~lV 551 (752)
..++|++.+.||+|+||.||+|+. +++.||||++...... +++.... ..++|
T Consensus 40 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv 118 (342)
T 1b6c_B 40 IARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 118 (342)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEE
T ss_pred ccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEE
Confidence 457899999999999999999987 5899999987543211 2222333 78999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHH--------hCCCCCeeecCCCCCCEEeCCCCceEEeec
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLH--------NNCFPPIVHWDISSKNVLLDLGYEAHVSDF 623 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH--------~~~~~~ivH~DlKp~NIll~~~~~~kl~Df 623 (752)
|||+++|+|.+++... .+++.+++.++.|++.||+||| +. +|+||||||+||+++.++.+||+||
T Consensus 119 ~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~kL~Df 191 (342)
T 1b6c_B 119 SDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADL 191 (342)
T ss_dssp ECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEEECCC
T ss_pred EeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEEEEEC
Confidence 9999999999999754 3889999999999999999999 77 9999999999999999999999999
Q ss_pred ccceeccCCCCC----cccccCCCCccCccccccCC------CCCccchhhHHHHHHHHHhC----------CCCcchhh
Q 041438 624 RIAKFLNLDSSN----WSKLAGTHGNVAPELAYTMK------VTEKCDVYSFGVLALEVIKG----------KHPRDFLF 683 (752)
Q Consensus 624 G~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~------~~~ksDIwSlGvil~elltg----------~~pf~~~~ 683 (752)
|++......... .....||+.|+|||++.+.. ++.++|||||||++|||+|| +.||....
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~ 271 (342)
T 1b6c_B 192 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 271 (342)
T ss_dssp TTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccC
Confidence 999877544321 23457999999999987652 34689999999999999999 67775322
Q ss_pred ccccccccchHhhhccCCC--CCCh-hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcCCC
Q 041438 684 EMSSSSSNMNIEILDSRLP--YPSL-DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPD 748 (752)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 748 (752)
............+...... .+.. ........+.+++.+||+.||++|||++|++++|+++....+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~ 339 (342)
T 1b6c_B 272 PSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 339 (342)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC
T ss_pred cCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhc
Confidence 1111111222222222221 1211 123567789999999999999999999999999999876554
No 151
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=334.20 Aligned_cols=236 Identities=19% Similarity=0.187 Sum_probs=176.9
Q ss_pred hcccccceeeccCCceEEEEEEeC----CCcEEEEEccCCCCCC-----------------------------------C
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVP----SGEIFAVKKFHSPLPD-----------------------------------N 540 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------------------------------~ 540 (752)
.++|++.+.||+|+||.||+|+.. +++.||||++...... +
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 468999999999999999999964 6789999987653210 1
Q ss_pred cccc----CCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCC
Q 041438 541 FCSH----PRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGY 616 (752)
Q Consensus 541 ~~~~----~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~ 616 (752)
++.. ....|+||||+ +++|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 2222 56789999999 889999997654 589999999999999999999999 999999999999998877
Q ss_pred --ceEEeecccceeccCCCC-------CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhcccc
Q 041438 617 --EAHVSDFRIAKFLNLDSS-------NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS 687 (752)
Q Consensus 617 --~~kl~DfG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~ 687 (752)
.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~ 268 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV 268 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence 999999999987643221 11345799999999999999999999999999999999999999952111000
Q ss_pred ccccchHhhhccCCCCCChhh-----HHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 688 SSSNMNIEILDSRLPYPSLDV-----QNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
.. .......... .+.... ...+.++.+++.+||+.||++||+++++++.|+++..
T Consensus 269 ~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 269 AV-QTAKTNLLDE--LPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HH-HHHHHHHHHT--TTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HH-HHHHHhhccc--ccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 00 0001111111 111000 1345579999999999999999999999999998764
No 152
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.9e-37 Score=318.38 Aligned_cols=233 Identities=23% Similarity=0.328 Sum_probs=187.7
Q ss_pred hcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-----------------------CccccCCceEEEEEecc
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-----------------------NFCSHPRQSFIVYEYLE 556 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~lV~E~~~ 556 (752)
.++|++.+.||+|+||.||+|+..+++.||+|+++..... +++.+.+..++||||++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 4689999999999999999999888899999998765322 34556678999999999
Q ss_pred CCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCC-CC
Q 041438 557 SGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS-SN 635 (752)
Q Consensus 557 ~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~-~~ 635 (752)
+++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+....... ..
T Consensus 87 ~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 161 (267)
T 3t9t_A 87 HGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 161 (267)
T ss_dssp TCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred CCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccccccc
Confidence 999999997643 3478899999999999999999999 99999999999999999999999999998654221 11
Q ss_pred cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhccCCCCCChhhHHHHHH
Q 041438 636 WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKFMS 714 (752)
Q Consensus 636 ~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (752)
.....++..|+|||++.+..++.++||||+|+++|||++ |+.||... ........+......... ...+..
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-----~~~~~~~~i~~~~~~~~~---~~~~~~ 233 (267)
T 3t9t_A 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-----SNSEVVEDISTGFRLYKP---RLASTH 233 (267)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHHHTTCCCCCC---TTSCHH
T ss_pred cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC-----CHHHHHHHHhcCCcCCCC---ccCcHH
Confidence 123467788999999998889999999999999999999 89998521 111222222222111111 234567
Q ss_pred HHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 715 IMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 715 l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
+.+++.+||+.||++|||++|++++|+++..
T Consensus 234 l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 234 VYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 8899999999999999999999999998854
No 153
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3e-37 Score=321.59 Aligned_cols=225 Identities=25% Similarity=0.392 Sum_probs=180.6
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCC---------------------------CCccccCCceEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLP---------------------------DNFCSHPRQSFI 550 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---------------------------~~~~~~~~~~~l 550 (752)
+.++|++.+.||+|+||.||+|+. .+++.||||++..... .+++......++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 467899999999999999999984 5678999998743210 045566788999
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++....
T Consensus 87 v~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp EECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 999999999999987543 488899999999999999999999 99999999999999999999999999986543
Q ss_pred CCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHH
Q 041438 631 LDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQN 710 (752)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (752)
.. ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.. .........+.......+. .
T Consensus 161 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~-----~~~~~~~~~~~~~~~~~~~----~ 229 (279)
T 3fdn_A 161 SS--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-----NTYQETYKRISRVEFTFPD----F 229 (279)
T ss_dssp ---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC-----SSHHHHHHHHHHTCCCCCT----T
T ss_pred cc--cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCC-----CcHHHHHHHHHhCCCCCCC----c
Confidence 22 23345799999999999999999999999999999999999999852 1122223333333333332 2
Q ss_pred HHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 041438 711 KFMSIMQVAFSCLDQNPVSRPTMKRFEVQS 740 (752)
Q Consensus 711 ~~~~l~~li~~cl~~dP~~Rps~~evl~~L 740 (752)
.+..+.+++.+||+.||++|||++|+++|-
T Consensus 230 ~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 230 VTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp SCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred CCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 445688999999999999999999999874
No 154
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=9e-37 Score=322.66 Aligned_cols=235 Identities=22% Similarity=0.340 Sum_probs=176.8
Q ss_pred hcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC--------------------CccccCCceEEEEEeccCCC
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD--------------------NFCSHPRQSFIVYEYLESGS 559 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------~~~~~~~~~~lV~E~~~~g~ 559 (752)
.++|++.+.||+|+||.||+|+. .++.||||++...... -+....+..++||||+++|+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~~ 85 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGS 85 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTTCB
T ss_pred HhHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCCCC
Confidence 46899999999999999999987 4789999998654211 01111245799999999999
Q ss_pred hHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCc-eEEeecccceeccCCCCCccc
Q 041438 560 LDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYE-AHVSDFRIAKFLNLDSSNWSK 638 (752)
Q Consensus 560 L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~-~kl~DfG~a~~~~~~~~~~~~ 638 (752)
|.+++........+++..+..++.|+++||+|||+....+|+||||||+||+++.++. +||+|||.+...... ...
T Consensus 86 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~---~~~ 162 (307)
T 2eva_A 86 LYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---MTN 162 (307)
T ss_dssp HHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------------
T ss_pred HHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---ccc
Confidence 9999987655455788999999999999999999921119999999999999988876 799999999865422 233
Q ss_pred ccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHHHHHHHHH
Q 041438 639 LAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKFMSIMQV 718 (752)
Q Consensus 639 ~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 718 (752)
..||+.|+|||++.+..++.++|||||||++|||++|+.||+... ...............+.. ....+..+.++
T Consensus 163 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~~l~~l 236 (307)
T 2eva_A 163 NKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG---GPAFRIMWAVHNGTRPPL---IKNLPKPIESL 236 (307)
T ss_dssp --CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTC---SSHHHHHHHHHTTCCCCC---BTTCCHHHHHH
T ss_pred CCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhC---ccHHHHHHHHhcCCCCCc---ccccCHHHHHH
Confidence 479999999999999999999999999999999999999985211 111111111111111111 13345678899
Q ss_pred HHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 719 AFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 719 i~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
+.+||+.||++|||++|++++|+++.
T Consensus 237 i~~~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 237 MTRCWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred HHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 99999999999999999999999875
No 155
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.7e-37 Score=324.69 Aligned_cols=239 Identities=23% Similarity=0.342 Sum_probs=181.3
Q ss_pred hcccccceeeccCCceEEEEEEe-----CCCcEEEEEccCCCCCC------------------------Ccc--ccCCce
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-----PSGEIFAVKKFHSPLPD------------------------NFC--SHPRQS 548 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~------------------------~~~--~~~~~~ 548 (752)
.++|++.+.||+|+||.||+|+. .+++.||||+++..... +++ ......
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 47899999999999999999983 36899999998654211 122 123457
Q ss_pred EEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeeccccee
Q 041438 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKF 628 (752)
Q Consensus 549 ~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~ 628 (752)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred EEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 99999999999999997654 3488999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCC---cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhcc-----ccccc-c----chHh
Q 041438 629 LNLDSSN---WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEM-----SSSSS-N----MNIE 695 (752)
Q Consensus 629 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~-----~~~~~-~----~~~~ 695 (752)
....... .....++..|+|||++.+..+++++|||||||++|||+||..||...... ..... . ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (295)
T 3ugc_A 164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 243 (295)
T ss_dssp ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHH
Confidence 6543221 12235777899999999999999999999999999999999997532210 00000 0 1111
Q ss_pred hhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 696 ILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
........+. ...+++++.+++.+||+.||++|||++|+++.|+++..
T Consensus 244 ~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 244 LLKNNGRLPR--PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HHHTTCCCCC--CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhccCcCCC--CcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 1111111111 13456679999999999999999999999999998854
No 156
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=5.6e-37 Score=324.98 Aligned_cols=239 Identities=21% Similarity=0.316 Sum_probs=189.0
Q ss_pred hhcccccceeeccCCceEEEEEEe------CCCcEEEEEccCCCCCC--------------------------CccccCC
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV------PSGEIFAVKKFHSPLPD--------------------------NFCSHPR 546 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~--------------------------~~~~~~~ 546 (752)
..++|++.+.||+|+||.||+|+. .+++.||||+++..... +++...+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 356899999999999999999984 35789999998754321 3455667
Q ss_pred ceEEEEEeccCCChHHHhccCcc---------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEE
Q 041438 547 QSFIVYEYLESGSLDKILNNDAS---------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVL 611 (752)
Q Consensus 547 ~~~lV~E~~~~g~L~~~l~~~~~---------------~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIl 611 (752)
..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+. +|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEE
Confidence 88999999999999999976532 12488999999999999999999999 9999999999999
Q ss_pred eCCCCceEEeecccceeccCCCCC--cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccc
Q 041438 612 LDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSS 688 (752)
Q Consensus 612 l~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~ 688 (752)
++.++.+||+|||.++........ .....+|+.|+|||++.+..++.++|||||||++|||+| |+.||... .
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-----~ 252 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-----P 252 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC-----C
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcc-----c
Confidence 999999999999999876544322 123457789999999999999999999999999999999 99998521 1
Q ss_pred cccchHhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcCC
Q 041438 689 SSNMNIEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNP 747 (752)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 747 (752)
................. ....+..+.+++.+||+.||++|||++|++++|+++..+.
T Consensus 253 ~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 253 VDSKFYKMIKEGFRMLS--PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp SSHHHHHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred chhHHHHHhccCCCCCC--cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 11112222222222111 1234567899999999999999999999999999876443
No 157
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=6.5e-37 Score=319.45 Aligned_cols=231 Identities=23% Similarity=0.320 Sum_probs=174.2
Q ss_pred hhcccccceeeccCCceEEEEEEeC----CCcEEEEEccCCCCCC-------------------------CccccCCceE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVP----SGEIFAVKKFHSPLPD-------------------------NFCSHPRQSF 549 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~ 549 (752)
..++|++.+.||+|+||.||+|+.. .+..||+|+++..... +++ ..+..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccE
Confidence 4578999999999999999999853 3557999987653211 222 346789
Q ss_pred EEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 550 lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 92 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp EEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccccc
Confidence 9999999999999997543 3488999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCC-cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhccC-CCCCCh
Q 041438 630 NLDSSN-WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDSR-LPYPSL 706 (752)
Q Consensus 630 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 706 (752)
...... .....+++.|+|||++.+..++.++|||||||++|||++ |..||... ........+.... .+.+
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~-----~~~~~~~~i~~~~~~~~~-- 239 (281)
T 1mp8_A 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV-----KNNDVIGRIENGERLPMP-- 239 (281)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC-----CGGGHHHHHHTTCCCCCC--
T ss_pred CcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcC-----CHHHHHHHHHcCCCCCCC--
Confidence 533221 223356789999999998899999999999999999997 99998522 1122222232222 2222
Q ss_pred hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 707 DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 707 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
...++.+.+++.+||+.||++|||++|++++|+++.
T Consensus 240 --~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 240 --PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 345567889999999999999999999999999875
No 158
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5.8e-36 Score=345.76 Aligned_cols=306 Identities=22% Similarity=0.178 Sum_probs=272.0
Q ss_pred EEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcc
Q 041438 89 INLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQ 168 (752)
Q Consensus 89 l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 168 (752)
+++.++.+ +.+++..|..+++|++|+|++|.|+++.|..|+++++|++|+|++|.|++..|..|+++++|++|+|++|.
T Consensus 56 l~l~~~~l-~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 134 (597)
T 3oja_B 56 VTFKNSTM-RKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERND 134 (597)
T ss_dssp EEESSCEE-SEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEeeCCCC-CCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCC
Confidence 44444443 34556668899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCC
Q 041438 169 LNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLS 248 (752)
Q Consensus 169 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~ 248 (752)
|++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|++|.+++.. ++.+++|+.|++++|.+++.
T Consensus 135 l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l---- 207 (597)
T 3oja_B 135 LSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL---- 207 (597)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEE----
T ss_pred CCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccc----
Confidence 99877777899999999999999999999999999999999999999999763 56678899999999999863
Q ss_pred CCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcc
Q 041438 249 IDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLIN 328 (752)
Q Consensus 249 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 328 (752)
...++|+.|++++|.++...+.. .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|..|+.+++
T Consensus 208 ---~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 279 (597)
T 3oja_B 208 ---AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQR 279 (597)
T ss_dssp ---ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSS
T ss_pred ---cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccC
Confidence 23468999999999998654432 3689999999999987 477999999999999999999999999999999
Q ss_pred cceeeccccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccC
Q 041438 329 LEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSY 408 (752)
Q Consensus 329 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 408 (752)
|++|+|++|.++++ |..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|.+++.. +..+++|+.|+|++
T Consensus 280 L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~ 354 (597)
T 3oja_B 280 LERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSH 354 (597)
T ss_dssp CCEEECTTSCCCEE-ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCS
T ss_pred CCEEECCCCCCCCC-CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeC
Confidence 99999999999995 556688999999999999998 57788899999999999999998764 66788999999999
Q ss_pred CcCCcCC
Q 041438 409 NNLSGLI 415 (752)
Q Consensus 409 N~l~~~~ 415 (752)
|++++..
T Consensus 355 N~~~~~~ 361 (597)
T 3oja_B 355 NDWDCNS 361 (597)
T ss_dssp SCEEHHH
T ss_pred CCCCChh
Confidence 9998754
No 159
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.3e-37 Score=336.33 Aligned_cols=240 Identities=20% Similarity=0.284 Sum_probs=187.0
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------------Ccccc--CCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-------------------------NFCSH--PRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~--~~~~~lV 551 (752)
.++|++.+.||+|+||.||+|+. .+|+.||||+++..... +++.. ....++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 46799999999999999999995 46999999998643211 22222 3367999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEe----CCCCceEEeecccce
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLL----DLGYEAHVSDFRIAK 627 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll----~~~~~~kl~DfG~a~ 627 (752)
|||+++|+|.+++........+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999998765444589999999999999999999999 99999999999999 777889999999998
Q ss_pred eccCCCCCcccccCCCCccCcccccc--------CCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhcc
Q 041438 628 FLNLDSSNWSKLAGTHGNVAPELAYT--------MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDS 699 (752)
Q Consensus 628 ~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 699 (752)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ....+....+...
T Consensus 165 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-~~~~~~~~~~~~~ 242 (396)
T 4eut_A 165 ELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP-RRNKEVMYKIITG 242 (396)
T ss_dssp ECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCT-TTCHHHHHHHHHS
T ss_pred EccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcc-cchHHHHHHHhcC
Confidence 765332 2334579999999998765 45788999999999999999999999632111 1111122222221
Q ss_pred C---------------------CCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 700 R---------------------LPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 700 ~---------------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
. .+............+.+++.+||+.||++||+++|++++++++.
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il 308 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHH
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHh
Confidence 1 11111122567778999999999999999999999999998764
No 160
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.8e-36 Score=338.13 Aligned_cols=230 Identities=19% Similarity=0.220 Sum_probs=171.1
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------Ccc------ccCC
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFC------SHPR 546 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~------~~~~ 546 (752)
.++|++.+.||+|+||.||+|+. .+++.||||++...... +++ ....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 57899999999999999999984 57899999998654221 122 2224
Q ss_pred ceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccc
Q 041438 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIA 626 (752)
Q Consensus 547 ~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a 626 (752)
..|+||||+++ ++.+.+.. .+++..++.+++||+.||+|||+. ||+||||||+|||++.++.+||+|||+|
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a 211 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 211 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC
T ss_pred eEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEee
Confidence 67999999987 57666642 278899999999999999999999 9999999999999999999999999999
Q ss_pred eeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhcccc-----------------cc
Q 041438 627 KFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS-----------------SS 689 (752)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~-----------------~~ 689 (752)
+..... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||........ ..
T Consensus 212 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 212 RTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp -----C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTS
T ss_pred eecCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHc
Confidence 876532 234456899999999999999999999999999999999999999963211000 00
Q ss_pred ccchHhhhccCCCC----------------CChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 690 SNMNIEILDSRLPY----------------PSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 690 ~~~~~~~~~~~~~~----------------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.............. .........+++.+++.+||+.||++|||++|+++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00011111111111 111112236679999999999999999999999986
No 161
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=4.5e-37 Score=328.01 Aligned_cols=233 Identities=21% Similarity=0.366 Sum_probs=177.9
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcE----EEEEccCCCCCC-------------------------CccccCCceE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEI----FAVKKFHSPLPD-------------------------NFCSHPRQSF 549 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~~~-------------------------~~~~~~~~~~ 549 (752)
.++|++.+.||+|+||.||+|+. .+++. ||+|.++..... +++.. ...+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES-SSEE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-CCeE
Confidence 56899999999999999999984 34443 688887543221 22333 4578
Q ss_pred EEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 550 lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
+||||+.+|+|.+++.... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+..
T Consensus 93 ~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred EEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 9999999999999997644 3488999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCc--ccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhccCCCCCCh
Q 041438 630 NLDSSNW--SKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDSRLPYPSL 706 (752)
Q Consensus 630 ~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 706 (752)
....... ....+|+.|+|||++.+..++.++|||||||++|||+| |+.||+.. ...............+.
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~------~~~~~~~~~~~~~~~~~- 240 (327)
T 3poz_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI------PASEISSILEKGERLPQ- 240 (327)
T ss_dssp TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC------CGGGHHHHHHTTCCCCC-
T ss_pred cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCC------CHHHHHHHHHcCCCCCC-
Confidence 5433222 23356889999999999999999999999999999999 99998521 11122222222221111
Q ss_pred hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcC
Q 041438 707 DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYN 746 (752)
Q Consensus 707 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 746 (752)
....+.++.+++.+||+.||++||+++|++++|+++...
T Consensus 241 -~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 241 -PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred -CccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 123456788999999999999999999999999887543
No 162
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=6.9e-37 Score=331.84 Aligned_cols=230 Identities=14% Similarity=0.109 Sum_probs=180.8
Q ss_pred hhcccccceeeccCCceEEEEEE------eCCCcEEEEEccCCCCCC------------------------CccccCCce
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIAR------VPSGEIFAVKKFHSPLPD------------------------NFCSHPRQS 548 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~------------------------~~~~~~~~~ 548 (752)
..++|++.+.||+|+||.||+|+ ..+++.||||+++..... +++...+..
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~ 142 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGS 142 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCE
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCc
Confidence 46789999999999999999993 557899999998654321 334567788
Q ss_pred EEEEEeccCCChHHHhccCc--cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCC-----------C
Q 041438 549 FIVYEYLESGSLDKILNNDA--SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDL-----------G 615 (752)
Q Consensus 549 ~lV~E~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~-----------~ 615 (752)
|+||||+++|+|.+++.... ....+++..++.|+.||++||+|||+. +|+||||||+|||++. +
T Consensus 143 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~~ 219 (365)
T 3e7e_A 143 VLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLS 219 (365)
T ss_dssp EEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------C
T ss_pred EEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccccccc
Confidence 99999999999999997532 234589999999999999999999999 9999999999999998 8
Q ss_pred CceEEeecccceeccCC--CCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccch
Q 041438 616 YEAHVSDFRIAKFLNLD--SSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMN 693 (752)
Q Consensus 616 ~~~kl~DfG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~ 693 (752)
+.+||+|||+|+..... .......+||+.|+|||++.+..++.++|||||||++|||+||+.||..... ....
T Consensus 220 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-----~~~~ 294 (365)
T 3e7e_A 220 AGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEG-----GECK 294 (365)
T ss_dssp TTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEET-----TEEE
T ss_pred CCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCC-----Ccee
Confidence 99999999999865422 2223445899999999999999999999999999999999999999852111 0000
Q ss_pred HhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCC-CCHHHHHHHHhhhh
Q 041438 694 IEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSR-PTMKRFEVQSKQFH 744 (752)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-ps~~evl~~L~~~~ 744 (752)
........ ...+.+.+++.+|++.+|.+| |+++++.+.|+++.
T Consensus 295 ---~~~~~~~~-----~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l 338 (365)
T 3e7e_A 295 ---PEGLFRRL-----PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF 338 (365)
T ss_dssp ---ECSCCTTC-----SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred ---echhcccc-----CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence 11111111 113356678889999999999 68888888887764
No 163
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=7e-37 Score=324.81 Aligned_cols=234 Identities=19% Similarity=0.314 Sum_probs=179.9
Q ss_pred hcccccc-eeeccCCceEEEEEE-eCCCcEEEEEccCCCCCC-------------------------CccccCCceEEEE
Q 041438 500 TNDFDAK-HCIGKGGHGSVYIAR-VPSGEIFAVKKFHSPLPD-------------------------NFCSHPRQSFIVY 552 (752)
Q Consensus 500 ~~~y~~~-~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~lV~ 552 (752)
.+.|++. +.||+|+||.||+|+ ..+++.||||+++..... +++.+.+..|+||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 4678885 789999999999999 457999999998654221 3445667899999
Q ss_pred EeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCc---eEEeecccceec
Q 041438 553 EYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYE---AHVSDFRIAKFL 629 (752)
Q Consensus 553 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~---~kl~DfG~a~~~ 629 (752)
||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++. +||+|||++...
T Consensus 91 e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~ 164 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR---HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164 (316)
T ss_dssp ECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred EcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence 9999999999997643 488899999999999999999999 9999999999999988766 999999999865
Q ss_pred cCCCC-------CcccccCCCCccCcccccc-----CCCCCccchhhHHHHHHHHHhCCCCcchhhccccc---------
Q 041438 630 NLDSS-------NWSKLAGTHGNVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSS--------- 688 (752)
Q Consensus 630 ~~~~~-------~~~~~~gt~~y~aPE~~~~-----~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~--------- 688 (752)
..... .....+||+.|+|||++.+ ..++.++||||+||++|||++|+.||.........
T Consensus 165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 244 (316)
T 2ac3_A 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244 (316)
T ss_dssp -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHH
T ss_pred ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchh
Confidence 42211 1123469999999999875 45789999999999999999999998632211000
Q ss_pred -cccchHhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 689 -SSNMNIEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 689 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.......+.......+.......+.++.+++.+||+.||++|||++|+++|
T Consensus 245 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 245 CQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 011233444455555543334556789999999999999999999999986
No 164
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=8e-37 Score=323.48 Aligned_cols=239 Identities=20% Similarity=0.231 Sum_probs=176.8
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC---------------------------CccccCCceEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD---------------------------NFCSHPRQSFI 550 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------------------------~~~~~~~~~~l 550 (752)
..++|++.+.||+|+||.||+|+. .+|+.||||+++..... +++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 346899999999999999999994 67999999988653211 34456678899
Q ss_pred EEEeccCCChHHHhccCc-cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 551 VYEYLESGSLDKILNNDA-SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
||||+++++|.+++.... ....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 999999999999987532 134588999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhH
Q 041438 630 NLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQ 709 (752)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (752)
...........|++.|+|||++.+..++.++|||||||++|||++|+.||.... .........+.....+.. ...
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~~~~~~--~~~ 261 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKKIEQCDYPPL--PSD 261 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC------CCHHHHHHHHHTTCSCCC--CTT
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc---hhHHHHHHHhhcccCCCC--ccc
Confidence 544433444578999999999999999999999999999999999999985211 011111222222222211 113
Q ss_pred HHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 710 NKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 710 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
..+.++.+++.+||+.||++|||++|++++|++++.
T Consensus 262 ~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 262 HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 455678999999999999999999999999999873
No 165
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.2e-36 Score=325.68 Aligned_cols=233 Identities=21% Similarity=0.343 Sum_probs=184.8
Q ss_pred hcccccceeeccCCceEEEEEEe--------CCCcEEEEEccCCCCCC--------------------------CccccC
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV--------PSGEIFAVKKFHSPLPD--------------------------NFCSHP 545 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~--------------------------~~~~~~ 545 (752)
.++|++.+.||+|+||.||+|+. .+++.||||+++..... +++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 57899999999999999999985 35778999998754321 345567
Q ss_pred CceEEEEEeccCCChHHHhccCcc-------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEe
Q 041438 546 RQSFIVYEYLESGSLDKILNNDAS-------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLL 612 (752)
Q Consensus 546 ~~~~lV~E~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll 612 (752)
+..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 788999999999999999986532 12488999999999999999999999 99999999999999
Q ss_pred CCCCceEEeecccceeccCCCC--CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhcccccc
Q 041438 613 DLGYEAHVSDFRIAKFLNLDSS--NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSS 689 (752)
Q Consensus 613 ~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~ 689 (752)
+.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||... ..
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-----~~ 265 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-----PV 265 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC-----CH
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC-----CH
Confidence 9999999999999987654321 1223357788999999988889999999999999999999 99998521 11
Q ss_pred ccchHhhhccC-CCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 690 SNMNIEILDSR-LPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 690 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
.+....+.... ...+ ...+.++.+++.+||+.||++|||++|++++|+++.
T Consensus 266 ~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~ 317 (334)
T 2pvf_A 266 EELFKLLKEGHRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317 (334)
T ss_dssp HHHHHHHHHTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCC----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11222222221 1222 234567889999999999999999999999999875
No 166
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.3e-36 Score=317.46 Aligned_cols=228 Identities=19% Similarity=0.280 Sum_probs=181.9
Q ss_pred hcccccceeeccCCceEEEEEEeC-CCcEEEEEccCCCCCC------------------------------CccccCCce
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSPLPD------------------------------NFCSHPRQS 548 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------------------------------~~~~~~~~~ 548 (752)
.++|++.+.||+|+||.||+|+.. +++.||+|.++..... +++.+....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 367999999999999999999964 7999999987643211 345566788
Q ss_pred EEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCC----ceEEeecc
Q 041438 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGY----EAHVSDFR 624 (752)
Q Consensus 549 ~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~----~~kl~DfG 624 (752)
++||||+++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 84 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 9999999999999999753 3488999999999999999999999 999999999999998877 79999999
Q ss_pred cceeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCC
Q 041438 625 IAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYP 704 (752)
Q Consensus 625 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (752)
.+....... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||... ........+.......+
T Consensus 158 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~~ 231 (283)
T 3bhy_A 158 IAHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE-----TKQETLTNISAVNYDFD 231 (283)
T ss_dssp TCEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTTCCCCC
T ss_pred cceeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc-----chHHHHHHhHhcccCCc
Confidence 998765332 233457999999999999889999999999999999999999998521 12222233333333333
Q ss_pred ChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 705 SLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 705 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.......+..+.+++.+||+.||++|||++|+++|
T Consensus 232 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 232 EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 32233456678999999999999999999999975
No 167
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=325.72 Aligned_cols=219 Identities=19% Similarity=0.259 Sum_probs=181.0
Q ss_pred hhcccccceeeccCCceEEEEEE-eCCCcEEEEEccCCCCCC--------------------------------CccccC
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVKKFHSPLPD--------------------------------NFCSHP 545 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--------------------------------~~~~~~ 545 (752)
..++|++.+.||+|+||.||+|+ ..+++.||||+++..... +++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 46789999999999999999998 467899999988654210 345567
Q ss_pred CceEEEEEeccCC-ChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecc
Q 041438 546 RQSFIVYEYLESG-SLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFR 624 (752)
Q Consensus 546 ~~~~lV~E~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG 624 (752)
+..++||||+.+| +|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 8889999999777 9999997653 488999999999999999999999 99999999999999999999999999
Q ss_pred cceeccCCCCCcccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCC
Q 041438 625 IAKFLNLDSSNWSKLAGTHGNVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPY 703 (752)
Q Consensus 625 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 703 (752)
+++...... ......||+.|+|||++.+..+ ++++|||||||++|||++|+.||..... ........
T Consensus 176 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----------~~~~~~~~ 243 (335)
T 3dls_A 176 SAAYLERGK-LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE-----------TVEAAIHP 243 (335)
T ss_dssp TCEECCTTC-CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-----------GTTTCCCC
T ss_pred cceECCCCC-ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-----------HHhhccCC
Confidence 998875433 3344679999999999988876 8899999999999999999999853211 11111122
Q ss_pred CChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 704 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
+ ...++++.+++.+||++||++|||++|++++
T Consensus 244 ~----~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 244 P----YLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp S----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred C----cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 2 1234568899999999999999999999987
No 168
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=8e-37 Score=323.61 Aligned_cols=232 Identities=20% Similarity=0.304 Sum_probs=173.6
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccCCceEEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIVY 552 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV~ 552 (752)
.++|++.+.||+|+||.||+|+. .+|+.||||++...... +++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 36899999999999999999995 46999999987554322 3455677889999
Q ss_pred EeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCC
Q 041438 553 EYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLD 632 (752)
Q Consensus 553 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~ 632 (752)
||+++++|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.+......
T Consensus 82 e~~~~~~l~~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 82 EYCDHTVLHELDRYQR---GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp ECCSEEHHHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EeCCCchHHHHHhhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 9999999998886543 388899999999999999999999 9999999999999999999999999999887654
Q ss_pred CCCcccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhh---------------
Q 041438 633 SSNWSKLAGTHGNVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEI--------------- 696 (752)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~--------------- 696 (752)
........||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......... ......
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 233 (311)
T 4agu_A 156 SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQL--YLIRKTLGDLIPRHQQVFSTN 233 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH--HHHHHHHCSCCHHHHHHHHTC
T ss_pred ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHHhcccccccccccccc
Confidence 444455689999999999876 56899999999999999999999998532110000 000000
Q ss_pred ---hccCCCCCC------hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 697 ---LDSRLPYPS------LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 697 ---~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.....+.+. ......+.++.+++.+||+.||++|||++|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000111110 0112345578899999999999999999999976
No 169
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.1e-37 Score=349.73 Aligned_cols=231 Identities=20% Similarity=0.262 Sum_probs=186.1
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCC----C-----------------------CccccCCceEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLP----D-----------------------NFCSHPRQSFI 550 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~-----------------------~~~~~~~~~~l 550 (752)
..++|++.+.||+|+||.||+|+. .+|+.||||++.+... . +++.+.+..|+
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 467899999999999999999995 5799999998753210 0 34556788999
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
||||+++|+|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+...
T Consensus 262 VmEy~~gg~L~~~l~~~~~-~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQ-AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp EECCCCSCBHHHHHHSSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEcCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 9999999999999976542 3489999999999999999999999 99999999999999999999999999998875
Q ss_pred CCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHH
Q 041438 631 LDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQN 710 (752)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (752)
... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||...... .........+......++ ..
T Consensus 338 ~~~-~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~-~~~~~i~~~i~~~~~~~p----~~ 411 (576)
T 2acx_A 338 EGQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK-IKREEVERLVKEVPEEYS----ER 411 (576)
T ss_dssp TTC-CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC-CCHHHHHHHHHHCCCCCC----TT
T ss_pred cCc-cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccc-hhHHHHHHHhhcccccCC----cc
Confidence 332 334458999999999999989999999999999999999999999632110 011122223333333333 33
Q ss_pred HHHHHHHHHHhccCcCCCCCC-----CHHHHHHH
Q 041438 711 KFMSIMQVAFSCLDQNPVSRP-----TMKRFEVQ 739 (752)
Q Consensus 711 ~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 739 (752)
.++++.++|.+||+.||++|| +++|+++|
T Consensus 412 ~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 412 FSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred CCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 556789999999999999999 78888865
No 170
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.6e-36 Score=321.50 Aligned_cols=272 Identities=31% Similarity=0.414 Sum_probs=215.6
Q ss_pred Cccc-ceeeCC--CCCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccc--cCCccCcCCCCCCeeecCC-Cccc
Q 041438 73 CTWS-GIHCNH--AGRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFD--IIPPQISNLSKLEYLDFLT-NKLS 146 (752)
Q Consensus 73 c~w~-gv~C~~--~~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~-N~l~ 146 (752)
-.|. +..|+. +..|++-.-+ ...+++.|+|++|++++ .+|..|+++++|++|+|++ |++.
T Consensus 25 ~~W~~~~~~C~~~w~gv~C~~~~--------------~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~ 90 (313)
T 1ogq_A 25 SSWLPTTDCCNRTWLGVLCDTDT--------------QTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLV 90 (313)
T ss_dssp TTCCTTSCTTTTCSTTEEECCSS--------------SCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEE
T ss_pred cCCCCCCCCCcCCCcceEeCCCC--------------CCceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCccc
Confidence 4685 445655 6667762110 12478899999999998 8899999999999999995 9999
Q ss_pred ccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeecccccccccccccc
Q 041438 147 GHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIG 226 (752)
Q Consensus 147 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 226 (752)
+.+|..|+++++|++|+|++|+|++.+|..|.++++|++|+|++|++++.+|..|.++++|++|+|++|++++.+|..++
T Consensus 91 ~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 170 (313)
T 1ogq_A 91 GPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYG 170 (313)
T ss_dssp SCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGG
T ss_pred ccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHh
Confidence 89999999999999999999999988899999999999999999999988888899999999999999998888877765
Q ss_pred CccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccC
Q 041438 227 NLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLN 306 (752)
Q Consensus 227 ~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 306 (752)
+++ ++|+.|++++|++++.+|..+..++ |++|+|++|.+++..|..|..+++|+
T Consensus 171 ~l~-------------------------~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~ 224 (313)
T 1ogq_A 171 SFS-------------------------KLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQ 224 (313)
T ss_dssp CCC-------------------------TTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCS
T ss_pred hhh-------------------------hcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCC
Confidence 443 1566777777888777787777776 88888888888888888888888888
Q ss_pred EEEccCCcCcccCCcccCCCcccceeeccccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCcc
Q 041438 307 RISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNF 386 (752)
Q Consensus 307 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 386 (752)
.|+|++|++++.+|. +..+++|++|+|++|++++..|..|..+++|++|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 225 ~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 225 KIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp EEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred EEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 888888888766555 667777777777777777777777777777777777777777776665 667777777777776
No 171
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=9.9e-37 Score=320.23 Aligned_cols=227 Identities=22% Similarity=0.320 Sum_probs=186.4
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC---------------------------CccccCCceEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD---------------------------NFCSHPRQSFI 550 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------------------------~~~~~~~~~~l 550 (752)
..++|++.+.||+|+||.||+|+. .+++.||+|++...... +++.+.+..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 356899999999999999999995 46889999987543211 44566788999
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
||||+++++|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 93 v~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 93 VLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EEECCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 999999999999886543 488999999999999999999999 99999999999999999999999999998876
Q ss_pred CCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHH
Q 041438 631 LDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQN 710 (752)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (752)
..........||+.|+|||++.+..++.++||||+|+++|+|++|+.||... ...+....+.......+. .
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~----~ 237 (294)
T 2rku_A 167 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-----CLKETYLRIKKNEYSIPK----H 237 (294)
T ss_dssp STTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTTCCCCCT----T
T ss_pred cCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHhhccCCCcc----c
Confidence 4444445568999999999999888999999999999999999999998521 112222333333333332 3
Q ss_pred HHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 041438 711 KFMSIMQVAFSCLDQNPVSRPTMKRFEVQS 740 (752)
Q Consensus 711 ~~~~l~~li~~cl~~dP~~Rps~~evl~~L 740 (752)
.+..+.+++.+||+.||++|||++|++++-
T Consensus 238 ~~~~~~~li~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 238 INPVAASLIQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred cCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 445788999999999999999999999863
No 172
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.7e-36 Score=334.58 Aligned_cols=229 Identities=21% Similarity=0.262 Sum_probs=176.2
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------------CccccC
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------------NFCSHP 545 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------------~~~~~~ 545 (752)
..++|++.+.||+|+||.||+|+. .+++.||||++...... +++ ..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~-~~ 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-DA 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEE-ES
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEE-ec
Confidence 467899999999999999999984 57899999987643110 222 34
Q ss_pred CceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCC---CceEEee
Q 041438 546 RQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLG---YEAHVSD 622 (752)
Q Consensus 546 ~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~---~~~kl~D 622 (752)
+..|+||||+++|+|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.+ +.+||+|
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred CceEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEee
Confidence 56799999999999999887543 488999999999999999999999 99999999999999754 4599999
Q ss_pred cccceeccCCCCCcccccCCCCccCcccccc---CCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhcc
Q 041438 623 FRIAKFLNLDSSNWSKLAGTHGNVAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDS 699 (752)
Q Consensus 623 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 699 (752)
||+|+..... ......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||... .........+...
T Consensus 286 FG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~----~~~~~~~~~i~~~ 360 (419)
T 3i6u_A 286 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH----RTQVSLKDQITSG 360 (419)
T ss_dssp SSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCC----SSSCCHHHHHHTT
T ss_pred cccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC----cchHHHHHHHhcC
Confidence 9999876532 23344689999999999863 56788999999999999999999998521 1122233344444
Q ss_pred CCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 700 RLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 700 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
............++.+.+++.+||+.||++|||++|+++|
T Consensus 361 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 361 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 4444433334566789999999999999999999999976
No 173
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.4e-36 Score=332.37 Aligned_cols=232 Identities=20% Similarity=0.277 Sum_probs=179.7
Q ss_pred hhcccccceeeccC--CceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccCCceE
Q 041438 499 ATNDFDAKHCIGKG--GHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSF 549 (752)
Q Consensus 499 ~~~~y~~~~~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~ 549 (752)
..++|++.+.||+| +||.||+|+. .+|+.||||+++..... +++...+..|
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 46789999999999 9999999995 47999999998654321 4456678899
Q ss_pred EEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 550 lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
+|||||++|+|.+++..... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 103 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFM-DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEccCCCCHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 99999999999999976532 3488999999999999999999999 9999999999999999999999999998764
Q ss_pred cCCC-------CCcccccCCCCccCcccccc--CCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccC
Q 041438 630 NLDS-------SNWSKLAGTHGNVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSR 700 (752)
Q Consensus 630 ~~~~-------~~~~~~~gt~~y~aPE~~~~--~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 700 (752)
.... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ......+....
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~ 253 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPA-----TQMLLEKLNGT 253 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCS-----TTHHHHC----
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHhcCC
Confidence 3221 11223478999999999987 5789999999999999999999999853211 01111110000
Q ss_pred CC-----------------------------------C-------CChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHH
Q 041438 701 LP-----------------------------------Y-------PSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEV 738 (752)
Q Consensus 701 ~~-----------------------------------~-------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 738 (752)
.+ . ........++++.+++.+||+.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 254 VPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ----------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 00 0 00011234567899999999999999999999997
Q ss_pred H
Q 041438 739 Q 739 (752)
Q Consensus 739 ~ 739 (752)
|
T Consensus 334 h 334 (389)
T 3gni_B 334 H 334 (389)
T ss_dssp S
T ss_pred C
Confidence 6
No 174
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.8e-36 Score=313.89 Aligned_cols=228 Identities=17% Similarity=0.241 Sum_probs=181.5
Q ss_pred hcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC--------------------------CccccC--CceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD--------------------------NFCSHP--RQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~--~~~~lV 551 (752)
.++|++.+.||+|+||.||+|+. +++.||||+++..... +++... ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 46899999999999999999997 4889999998754321 233333 678999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCC--eeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP--IVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~--ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
|||+++|+|.+++..... ..+++..++.++.|++.||+|||+. + |+||||||+||+++.++.++|+|||++...
T Consensus 88 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTN-FVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp EECCTTCBHHHHHHSCSS-CCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred ecccCCCcHHHHHhhccc-CCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 999999999999986542 3589999999999999999999998 8 999999999999999999999999987653
Q ss_pred cCCCCCcccccCCCCccCccccccCCCCC---ccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCCh
Q 041438 630 NLDSSNWSKLAGTHGNVAPELAYTMKVTE---KCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSL 706 (752)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 706 (752)
.. ....||+.|+|||++.+..++. ++|||||||++|||++|+.||... ........+........
T Consensus 164 ~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~-----~~~~~~~~~~~~~~~~~-- 231 (271)
T 3kmu_A 164 QS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL-----SNMEIGMKVALEGLRPT-- 231 (271)
T ss_dssp SC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS-----CHHHHHHHHHHSCCCCC--
T ss_pred cc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc-----ChHHHHHHHHhcCCCCC--
Confidence 32 2347899999999988766544 799999999999999999998521 11111222222221111
Q ss_pred hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 707 DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 707 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
.....++++.+++.+||+.||++|||++|+++.|+++.
T Consensus 232 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 232 IPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 11335567899999999999999999999999999875
No 175
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.5e-37 Score=329.04 Aligned_cols=227 Identities=21% Similarity=0.292 Sum_probs=173.4
Q ss_pred hcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC----------------------------CccccCCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD----------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------------~~~~~~~~~~lV 551 (752)
.++|++.+.||+|+||.||+|...+++.||||++...... +++......|+|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 4679999999999999999999888999999987643221 344566788999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
|| +.+++|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++ ++.+||+|||+++....
T Consensus 88 ~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~ 159 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 159 (343)
T ss_dssp EC-CCSEEHHHHHHHSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred Ee-CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence 99 55779999997643 488899999999999999999999 999999999999997 57899999999987654
Q ss_pred CCCC--cccccCCCCccCcccccc-----------CCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhc
Q 041438 632 DSSN--WSKLAGTHGNVAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILD 698 (752)
Q Consensus 632 ~~~~--~~~~~gt~~y~aPE~~~~-----------~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~ 698 (752)
.... ....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ........+.+
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~~~~~~~~~~ 235 (343)
T 3dbq_A 160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII----NQISKLHAIID 235 (343)
T ss_dssp ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC----SHHHHHHHHHC
T ss_pred ccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh----hHHHHHHHHhc
Confidence 3321 234579999999999865 668899999999999999999999985211 11112222332
Q ss_pred cCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 041438 699 SRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQS 740 (752)
Q Consensus 699 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 740 (752)
........ ...+.++.+++.+||+.||++|||++|+++|-
T Consensus 236 ~~~~~~~~--~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 236 PNHEIEFP--DIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp TTSCCCCC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred CCcccCCc--ccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 22221110 12234688999999999999999999999874
No 176
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=4.6e-37 Score=327.60 Aligned_cols=282 Identities=21% Similarity=0.263 Sum_probs=190.5
Q ss_pred CCCHHHHHHHHHHHHccccCCccccCCCCccccCCCCCCCCcccceeeCCCCCEEEEEcCCCCCcccccccccCCCCCCC
Q 041438 33 SNSTEEAHALVKWKASLEVHSRSLLHSWSLSFVNATKISLCTWSGIHCNHAGRVFGINLTSISLNGTLLEFSFSSFPHLA 112 (752)
Q Consensus 33 ~~~~~~~~aLl~fk~~~~~~~~~~l~sW~~~~~~~~~~~~c~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~f~~l~~L~ 112 (752)
++..+|++||++||+++..|+.+.+.+|.... ....++|.|.|+.|+..... ......++++
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~--~~~~~~~~~~g~~~~~~~~~----------------l~~~~~~~l~ 84 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQAN--SNNPQIETRTGRALKATADL----------------LEDATQPGRV 84 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHT--TTCTTSCCSHHHHHHHHHHH----------------HHHHTSTTCC
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccc--cccccccccCCcchhhhHHH----------------Hhccccccee
Confidence 34567999999999999878877788895221 22458999999999631100 0112346788
Q ss_pred EEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCC
Q 041438 113 YLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNF 192 (752)
Q Consensus 113 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 192 (752)
+|+|++|+|+ .+|..+.++++|++|+|++|+|+ .+|..|+.+++|++|+|++|.|+ .+|..|+++++|++|+|++|+
T Consensus 85 ~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~ 161 (328)
T 4fcg_A 85 ALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACP 161 (328)
T ss_dssp EEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEET
T ss_pred EEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCC
Confidence 8888888887 46777888899999999999988 78888888999999999999988 778888888999999999988
Q ss_pred CCCcCCcCccC---------CCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEcc
Q 041438 193 LGGSIPRSLSN---------FTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVS 263 (752)
Q Consensus 193 l~~~~p~~~~~---------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls 263 (752)
+.+.+|..+.. +++|++|+|++|+|+ .+|..++++++|++|++++|++++
T Consensus 162 ~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-------------------- 220 (328)
T 4fcg_A 162 ELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-------------------- 220 (328)
T ss_dssp TCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC--------------------
T ss_pred CccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc--------------------
Confidence 88888877654 788888888888887 666666666555555555554443
Q ss_pred ccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeecccccccccc
Q 041438 264 INNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFV 343 (752)
Q Consensus 264 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 343 (752)
+|..+..+++|++|+|++|.+.+.+|..++++++|+.|+|++|++.+.+|..+..+++|++|+|++|++.+.+
T Consensus 221 -------l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~i 293 (328)
T 4fcg_A 221 -------LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRL 293 (328)
T ss_dssp -------CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCC
T ss_pred -------CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhc
Confidence 2333444555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred chhhcccccccEEEcCCCcC
Q 041438 344 LESLGSLVKLYYLNLSHNKL 363 (752)
Q Consensus 344 ~~~~~~l~~L~~L~Ls~N~l 363 (752)
|..++.+++|+.+++..|.+
T Consensus 294 P~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 294 PSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp CGGGGGSCTTCEEECCGGGS
T ss_pred cHHHhhccCceEEeCCHHHH
Confidence 55555555555555554444
No 177
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-36 Score=322.02 Aligned_cols=238 Identities=20% Similarity=0.262 Sum_probs=178.3
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC---------------------------CccccCCceEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD---------------------------NFCSHPRQSFI 550 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------------------------~~~~~~~~~~l 550 (752)
..++|++.+.||+|+||.||+|+. .+++.||||++...... +++...+..|+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 457899999999999999999995 47899999998643211 34556778899
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 112 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQG---PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EEECCCCEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEEecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 999999999999997543 488999999999999999999999 99999999999999999999999999998765
Q ss_pred CCC-CCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhH
Q 041438 631 LDS-SNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQ 709 (752)
Q Consensus 631 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (752)
... .......|++.|+|||++.+..++.++||||||+++|||++|+.||.... ............+.+.....
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~ 259 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ------LSVMGAHINQAIPRPSTVRP 259 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH------HHHHHHHHHSCCCCGGGTST
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch------HHHHHHHhccCCCCccccCC
Confidence 332 12234578999999999999999999999999999999999999985221 11222222222222222223
Q ss_pred HHHHHHHHHHHhccCcCCCCCC-CHHHHHHHHhhhhcCCC
Q 041438 710 NKFMSIMQVAFSCLDQNPVSRP-TMKRFEVQSKQFHYNPD 748 (752)
Q Consensus 710 ~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~~~~~~~~ 748 (752)
..+.++.+++.+||+.||++|| +++++++.|+++....+
T Consensus 260 ~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 260 GIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp TCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred CCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 4556788999999999999999 99999999998765543
No 178
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=8.7e-37 Score=321.84 Aligned_cols=238 Identities=21% Similarity=0.299 Sum_probs=182.6
Q ss_pred hcccccceeeccCCceEEEEEE-----eCCCcEEEEEccCCCCCC-------------------------CccccC--Cc
Q 041438 500 TNDFDAKHCIGKGGHGSVYIAR-----VPSGEIFAVKKFHSPLPD-------------------------NFCSHP--RQ 547 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~-----~~~~~~vavK~~~~~~~~-------------------------~~~~~~--~~ 547 (752)
.+.|++.+.||+|+||.||+|+ ..+++.||||+++..... +++... ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 3568899999999999999998 346899999998754321 223333 56
Q ss_pred eEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccce
Q 041438 548 SFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAK 627 (752)
Q Consensus 548 ~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~ 627 (752)
.++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccc
Confidence 899999999999999996543 3488999999999999999999999 99999999999999999999999999998
Q ss_pred eccCCCC---CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhcc-----ccc----cccchHh
Q 041438 628 FLNLDSS---NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEM-----SSS----SSNMNIE 695 (752)
Q Consensus 628 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~-----~~~----~~~~~~~ 695 (752)
....... ......||..|+|||++.+..++.++||||+||++|||+||..|+...... ... .......
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH
Confidence 8764432 123346888899999999999999999999999999999999997432110 000 0011111
Q ss_pred hhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 696 ILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
........+ .....++++.+++.+||+.||++|||++|+++.|+++.
T Consensus 255 ~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 255 TLKEGKRLP--CPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHTTCCCC--CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhccCCCC--CCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 111111111 11345567899999999999999999999999999863
No 179
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.4e-37 Score=328.21 Aligned_cols=237 Identities=19% Similarity=0.270 Sum_probs=187.6
Q ss_pred HHhhcccccceeeccCCceEEEEEEeC------CCcEEEEEccCCCCCC-------------------------CccccC
Q 041438 497 IRATNDFDAKHCIGKGGHGSVYIARVP------SGEIFAVKKFHSPLPD-------------------------NFCSHP 545 (752)
Q Consensus 497 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-------------------------~~~~~~ 545 (752)
....++|++.+.||+|+||.||+|+.. +++.||||++...... +++.+.
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 100 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence 345678999999999999999999843 4788999998654221 345567
Q ss_pred CceEEEEEeccCCChHHHhccCcc-------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCce
Q 041438 546 RQSFIVYEYLESGSLDKILNNDAS-------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEA 618 (752)
Q Consensus 546 ~~~~lV~E~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~ 618 (752)
+..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+
T Consensus 101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~ 177 (322)
T 1p4o_A 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 177 (322)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCE
T ss_pred CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeE
Confidence 788999999999999999975321 13468899999999999999999999 99999999999999999999
Q ss_pred EEeecccceeccCCCCC--cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHh
Q 041438 619 HVSDFRIAKFLNLDSSN--WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIE 695 (752)
Q Consensus 619 kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~ 695 (752)
||+|||+++........ .....+|+.|+|||++.+..++.++||||+||++|||++ |+.||... ........
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-----~~~~~~~~ 252 (322)
T 1p4o_A 178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-----SNEQVLRF 252 (322)
T ss_dssp EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-----CHHHHHHH
T ss_pred EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC-----CHHHHHHH
Confidence 99999999865433211 122356889999999999899999999999999999999 89998521 11222222
Q ss_pred hhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 696 ILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
+......... ...+..+.+++.+||+.||++|||++|++++|+++.
T Consensus 253 ~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 253 VMEGGLLDKP---DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp HHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred HHcCCcCCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence 3332222111 234567889999999999999999999999998863
No 180
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.9e-36 Score=335.81 Aligned_cols=231 Identities=26% Similarity=0.352 Sum_probs=185.0
Q ss_pred hhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC----------------------Ccccc-CCceEEEEEec
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD----------------------NFCSH-PRQSFIVYEYL 555 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~-~~~~~lV~E~~ 555 (752)
..++|++.+.||+|+||.||+|+. .++.||||+++..... +++.. ....|+||||+
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~ 269 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 269 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred ChHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence 457899999999999999999987 4789999998764322 22333 34789999999
Q ss_pred cCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCCCC
Q 041438 556 ESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN 635 (752)
Q Consensus 556 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 635 (752)
++|+|.+++...+. ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 270 ~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 342 (450)
T 1k9a_A 270 AKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 342 (450)
T ss_dssp TTCBHHHHHHHHCT-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred CCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence 99999999986432 3368899999999999999999999 9999999999999999999999999999865322
Q ss_pred cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhcc-CCCCCChhhHHHHH
Q 041438 636 WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDS-RLPYPSLDVQNKFM 713 (752)
Q Consensus 636 ~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 713 (752)
.....++..|+|||++.+..++.++|||||||++|||+| |+.||... ...+....+... +.+.+ ..+++
T Consensus 343 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~-----~~~~~~~~i~~~~~~~~p----~~~~~ 413 (450)
T 1k9a_A 343 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPRVEKGYKMDAP----DGCPP 413 (450)
T ss_dssp ----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTS-----CTTTHHHHHHTTCCCCCC----TTCCH
T ss_pred ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHcCCCCCCC----CcCCH
Confidence 122367889999999999999999999999999999998 99998521 112222222222 22222 34567
Q ss_pred HHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcC
Q 041438 714 SIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYN 746 (752)
Q Consensus 714 ~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 746 (752)
++.++|.+||+.||++|||++|+++.|+++...
T Consensus 414 ~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 414 AVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 889999999999999999999999999987643
No 181
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=8.4e-37 Score=320.00 Aligned_cols=235 Identities=23% Similarity=0.323 Sum_probs=173.0
Q ss_pred hhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-------------------------CccccCCceEEEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-------------------------NFCSHPRQSFIVYE 553 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~lV~E 553 (752)
..++|++.++||+|+||.||+|+.. ..||||+++..... ..+......++|||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e 99 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQ 99 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEE
Confidence 3568999999999999999999853 35999988654322 01234566899999
Q ss_pred eccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCC
Q 041438 554 YLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS 633 (752)
Q Consensus 554 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~ 633 (752)
|+++++|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 100 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 174 (289)
T 3og7_A 100 WCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174 (289)
T ss_dssp CCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC---------
T ss_pred ecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccccc
Confidence 999999999996543 4588999999999999999999999 99999999999999999999999999998654221
Q ss_pred --CCcccccCCCCccCccccc---cCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCC-Chh
Q 041438 634 --SNWSKLAGTHGNVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYP-SLD 707 (752)
Q Consensus 634 --~~~~~~~gt~~y~aPE~~~---~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 707 (752)
.......||+.|+|||++. +..++.++|||||||++|||++|+.||.... ........+........ ...
T Consensus 175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~ 250 (289)
T 3og7_A 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN----NRDQIIEMVGRGSLSPDLSKV 250 (289)
T ss_dssp ---------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC----CHHHHHHHHHHTSCCCCTTSS
T ss_pred ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccc----hHHHHHHHhcccccCcchhhc
Confidence 2223457999999999886 5668889999999999999999999985211 11111122222222111 111
Q ss_pred hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 708 VQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 708 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
...+++.+.+++.+||+.||++|||++|+++.|+++.
T Consensus 251 ~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 251 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 2345678999999999999999999999999999875
No 182
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.2e-36 Score=317.60 Aligned_cols=234 Identities=18% Similarity=0.320 Sum_probs=185.6
Q ss_pred hhcccccceeeccCCceEEEEEEeC-CCcEEEEEccCCCCCC--------------------Ccc---------------
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSPLPD--------------------NFC--------------- 542 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------------------~~~--------------- 542 (752)
..++|++.+.||+|+||.||+|+.. +++.||+|+++..... +++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~ 88 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSS 88 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccc
Confidence 4568999999999999999999964 7999999988654321 111
Q ss_pred -ccCCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEe
Q 041438 543 -SHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVS 621 (752)
Q Consensus 543 -~~~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~ 621 (752)
......++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+. +|+||||||+||++++++.+||+
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 164 (284)
T 2a19_B 89 RSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIG 164 (284)
T ss_dssp CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEEC
T ss_pred ccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEEEC
Confidence 11345799999999999999997543 23588999999999999999999999 99999999999999999999999
Q ss_pred ecccceeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCC
Q 041438 622 DFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRL 701 (752)
Q Consensus 622 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 701 (752)
|||.+....... ......||+.|+|||++.+..++.++|||||||++|||++|..|+.... ...........
T Consensus 165 Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-------~~~~~~~~~~~ 236 (284)
T 2a19_B 165 DFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-------KFFTDLRDGII 236 (284)
T ss_dssp CCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-------HHHHHHHTTCC
T ss_pred cchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-------HHHHHhhcccc
Confidence 999998875432 2334579999999999999899999999999999999999999974211 11112222221
Q ss_pred CCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcCCCCC
Q 041438 702 PYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNPDHN 750 (752)
Q Consensus 702 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~ 750 (752)
+ ...+..+.+++.+||+.||++|||++|++++++.+...+...
T Consensus 237 ~------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~ 279 (284)
T 2a19_B 237 S------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN 279 (284)
T ss_dssp C------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-----
T ss_pred c------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcc
Confidence 1 123446789999999999999999999999999998776554
No 183
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=5.9e-37 Score=327.38 Aligned_cols=230 Identities=17% Similarity=0.253 Sum_probs=171.1
Q ss_pred HhhcccccceeeccCCceEEEEEE-eCCCcEEEEEccCCCCCC--------------------------CccccCCceEE
Q 041438 498 RATNDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFI 550 (752)
Q Consensus 498 ~~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~l 550 (752)
...++|++.+.||+|+||.||+|+ ..+++.||||+++..... +++.+.+..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 356789999999999999999998 457999999998643221 34556778999
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEe-----CCCCceEEeeccc
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLL-----DLGYEAHVSDFRI 625 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll-----~~~~~~kl~DfG~ 625 (752)
||||+++ +|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||++ ++.+.+||+|||+
T Consensus 111 v~e~~~~-~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 111 IFEYAEN-DLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EEECCSE-EHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EEecCCC-CHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 9999986 9999997654 388899999999999999999999 99999999999999 4555699999999
Q ss_pred ceeccCCCCCcccccCCCCccCccccccCC-CCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhc------
Q 041438 626 AKFLNLDSSNWSKLAGTHGNVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILD------ 698 (752)
Q Consensus 626 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~------ 698 (752)
++.............||+.|+|||++.+.. ++.++||||+||++|||++|+.||...... .....+..
T Consensus 184 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~~~~~~~~~~ 258 (329)
T 3gbz_A 184 ARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-----DQLFKIFEVLGLPD 258 (329)
T ss_dssp HHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHHHHHCCCC
T ss_pred ccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH-----HHHHHHHHHhCCCc
Confidence 987764444445568899999999988754 899999999999999999999998532110 00001000
Q ss_pred --------------cCCC-CCCh-----hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 699 --------------SRLP-YPSL-----DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 699 --------------~~~~-~~~~-----~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
...+ .... .....++++.+++.+||+.||++|||++|+++|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 259 DTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 0000 0000 011134678899999999999999999999974
No 184
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.8e-36 Score=341.86 Aligned_cols=227 Identities=21% Similarity=0.309 Sum_probs=183.8
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccCCceEEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIVY 552 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV~ 552 (752)
.++|++.+.||+|+||.||+|+. .+++.||||+++..... +++.+....|+||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46799999999999999999995 47899999998653211 4556678899999
Q ss_pred EeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCC---CCceEEeecccceec
Q 041438 553 EYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDL---GYEAHVSDFRIAKFL 629 (752)
Q Consensus 553 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~---~~~~kl~DfG~a~~~ 629 (752)
|||++|+|.+.+.... .+++..++.++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+++..
T Consensus 116 e~~~~g~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~ 189 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM---KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189 (494)
T ss_dssp ECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred ecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence 9999999998886543 488899999999999999999999 9999999999999975 455999999999887
Q ss_pred cCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhH
Q 041438 630 NLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQ 709 (752)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (752)
... ......+||+.|+|||++. ..++.++||||+||++|+|++|+.||.. ....+....+.......+...+.
T Consensus 190 ~~~-~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~-----~~~~~~~~~i~~~~~~~~~~~~~ 262 (494)
T 3lij_A 190 ENQ-KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGG-----QTDQEILRKVEKGKYTFDSPEWK 262 (494)
T ss_dssp BTT-BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHTCCCCCSGGGT
T ss_pred CCC-ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCC-----CCHHHHHHHHHhCCCCCCchhcc
Confidence 543 2334568999999999876 5699999999999999999999999852 22233445555555555554555
Q ss_pred HHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 710 NKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 710 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
..++.+.+++.+||+.||++|||++|+++|
T Consensus 263 ~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 263 NVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred cCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 677789999999999999999999999975
No 185
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.9e-37 Score=329.84 Aligned_cols=230 Identities=23% Similarity=0.332 Sum_probs=181.1
Q ss_pred hcccccceeeccCCceEEEEEEe----CCCcEEEEEccCCCCC-------C----------------------CccccCC
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV----PSGEIFAVKKFHSPLP-------D----------------------NFCSHPR 546 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~-------~----------------------~~~~~~~ 546 (752)
.++|++.+.||+|+||.||+|+. .+++.||||+++.... . +++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 57899999999999999999986 4789999998864211 0 2344567
Q ss_pred ceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccc
Q 041438 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIA 626 (752)
Q Consensus 547 ~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a 626 (752)
..++||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 8899999999999999997543 488899999999999999999999 9999999999999999999999999999
Q ss_pred eeccCCCC-CcccccCCCCccCcccccc--CCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCC
Q 041438 627 KFLNLDSS-NWSKLAGTHGNVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPY 703 (752)
Q Consensus 627 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~--~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 703 (752)
+....... .....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .........+.....+.
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 285 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK-NSQAEISRRILKSEPPY 285 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC-CCHHHHHHHHHHCCCCC
T ss_pred eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc-chHHHHHHHHhccCCCC
Confidence 87643222 2234579999999999885 34789999999999999999999998522111 11112223333333333
Q ss_pred CChhhHHHHHHHHHHHHhccCcCCCCCC-----CHHHHHHHH
Q 041438 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRP-----TMKRFEVQS 740 (752)
Q Consensus 704 ~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~L 740 (752)
+ ...+..+.++|.+||+.||++|| +++|+++|.
T Consensus 286 ~----~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 286 P----QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp C----TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred C----cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 3 23456788999999999999999 999998875
No 186
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4.6e-37 Score=333.98 Aligned_cols=229 Identities=10% Similarity=0.003 Sum_probs=172.8
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC---------------Ccc--ccC----------------
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD---------------NFC--SHP---------------- 545 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------------~~~--~~~---------------- 545 (752)
..+|++.+.||+|+||.||+|+. .+|+.||||+++..... ... .++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 45699999999999999999995 57999999998764321 000 011
Q ss_pred --------------------CceEEEEEeccCCChHHHhccCccccccCHHHH------HHHHHHHHHHHHHHHhCCCCC
Q 041438 546 --------------------RQSFIVYEYLESGSLDKILNNDASAKELGWTQR------LNVIKGVADALFYLHNNCFPP 599 (752)
Q Consensus 546 --------------------~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~------~~i~~qi~~aL~~lH~~~~~~ 599 (752)
...|+||||++ |+|.+++.... ..+++..+ ..++.||+.||+|||++ +
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ 214 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD--FVYVFRGDEGILALHILTAQLIRLAANLQSK---G 214 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc--cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---C
Confidence 23799999999 79999998643 22445555 67889999999999999 9
Q ss_pred eeecCCCCCCEEeCCCCceEEeecccceeccCCCCCcccccCCCCccCcccccc--CCCCCccchhhHHHHHHHHHhCCC
Q 041438 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKH 677 (752)
Q Consensus 600 ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~ksDIwSlGvil~elltg~~ 677 (752)
|+||||||+|||++.++.+||+|||+|+.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT---RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTC---EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCC---CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999987642 2224567799999999987 679999999999999999999999
Q ss_pred Ccchhhcccccccc--chHhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 678 PRDFLFEMSSSSSN--MNIEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 678 pf~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
||............ ............+ .....++.+.+++.+||+.||++|||++|+++|
T Consensus 292 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 292 PFGLVTPGIKGSWKRPSLRVPGTDSLAFG--SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp STTBCCTTCTTCCCBCCTTSCCCCSCCCT--TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred CCCCcCcccccchhhhhhhhccccccchh--hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 99633211111000 0011111122222 113456688999999999999999999999864
No 187
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1e-36 Score=326.44 Aligned_cols=226 Identities=22% Similarity=0.321 Sum_probs=186.2
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC---------------------------CccccCCceEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD---------------------------NFCSHPRQSFI 550 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------------------------~~~~~~~~~~l 550 (752)
..++|++.+.||+|+||.||+|+. .+++.||+|++...... +++.+.+..|+
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 457899999999999999999995 46889999987643211 44566788999
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
||||+++++|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 119 v~e~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 119 VLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp EECCCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 999999999999987543 488999999999999999999999 99999999999999999999999999998876
Q ss_pred CCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHH
Q 041438 631 LDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQN 710 (752)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (752)
..........||+.|+|||++.+..++.++|||||||++|||++|+.||... ...+....+.......+. .
T Consensus 193 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~~~~~~~~~~~~~~~~----~ 263 (335)
T 2owb_A 193 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-----CLKETYLRIKKNEYSIPK----H 263 (335)
T ss_dssp STTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHHTCCCCCT----T
T ss_pred cCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC-----CHHHHHHHHhcCCCCCCc----c
Confidence 4444445568999999999999988999999999999999999999998521 112222333333333332 3
Q ss_pred HHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 711 KFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 711 ~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.+..+.+++.+||+.||++|||++|++++
T Consensus 264 ~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 264 INPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 34568899999999999999999999975
No 188
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=6.8e-37 Score=341.42 Aligned_cols=233 Identities=21% Similarity=0.362 Sum_probs=187.1
Q ss_pred hhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-----------------------CccccCCceEEEEEec
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-----------------------NFCSHPRQSFIVYEYL 555 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~lV~E~~ 555 (752)
..++|++.+.||+|+||.||+|+..+++.||||+++..... +++ ..+..++||||+
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~-~~~~~~lv~e~~ 264 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFM 264 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEECCC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEE-eCCccEEEEeec
Confidence 46789999999999999999999888899999998754322 222 256789999999
Q ss_pred cCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCCC-
Q 041438 556 ESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSS- 634 (752)
Q Consensus 556 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~- 634 (752)
++|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 265 ~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 340 (454)
T 1qcf_A 265 AKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 340 (454)
T ss_dssp TTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH
T ss_pred CCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee
Confidence 9999999997543 23478899999999999999999999 999999999999999999999999999987642211
Q ss_pred CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhcc-CCCCCChhhHHHH
Q 041438 635 NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDS-RLPYPSLDVQNKF 712 (752)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 712 (752)
......++..|+|||++.+..++.++|||||||++|||+| |+.||... ...+....+... +.+.+ ..++
T Consensus 341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~-----~~~~~~~~i~~~~~~~~~----~~~~ 411 (454)
T 1qcf_A 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM-----SNPEVIRALERGYRMPRP----ENCP 411 (454)
T ss_dssp TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----CHHHHHHHHHHTCCCCCC----TTSC
T ss_pred ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHcCCCCCCC----CCCC
Confidence 1122356788999999998899999999999999999999 99998521 111122222221 22222 3456
Q ss_pred HHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 713 MSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 713 ~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
+++.++|.+||+.||++|||++++++.|+++..
T Consensus 412 ~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 412 EELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 678999999999999999999999999999853
No 189
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.5e-36 Score=331.76 Aligned_cols=227 Identities=21% Similarity=0.285 Sum_probs=174.4
Q ss_pred hcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC----------------------------CccccCCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD----------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------------~~~~~~~~~~lV 551 (752)
..+|++.+.||+|+||.||+|+..+++.||||++...... +++...+..|+|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 3569999999999999999999878999999988543221 234556778999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
|| +.+++|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++....
T Consensus 135 ~E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp EE-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred Ee-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 99 56779999997654 478889999999999999999999 999999999999996 57999999999987653
Q ss_pred CCC--CcccccCCCCccCcccccc-----------CCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhc
Q 041438 632 DSS--NWSKLAGTHGNVAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILD 698 (752)
Q Consensus 632 ~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~ 698 (752)
... .....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ........+.+
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~----~~~~~~~~~~~ 282 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII----NQISKLHAIID 282 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC----CHHHHHHHHHC
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh----HHHHHHHHHhC
Confidence 322 1234579999999999865 368899999999999999999999985211 11122233333
Q ss_pred cCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 041438 699 SRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQS 740 (752)
Q Consensus 699 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 740 (752)
.....+.. ...+.++.+++.+||+.||++|||++|+++|-
T Consensus 283 ~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 283 PNHEIEFP--DIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp TTSCCCCC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ccccCCCC--ccchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 33222111 11245688999999999999999999999764
No 190
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.2e-36 Score=342.80 Aligned_cols=227 Identities=20% Similarity=0.300 Sum_probs=186.2
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccCCceEEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIVY 552 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV~ 552 (752)
.++|++.+.||+|+||.||+|+. .+++.||||++...... +++.+....|+||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 56899999999999999999995 47999999987432110 4556678899999
Q ss_pred EeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeC---CCCceEEeecccceec
Q 041438 553 EYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLD---LGYEAHVSDFRIAKFL 629 (752)
Q Consensus 553 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~---~~~~~kl~DfG~a~~~ 629 (752)
|||.+|+|.+.+.... .+++..+..++.||+.||.|||+. +|+||||||+||+++ .++.+||+|||+++..
T Consensus 101 e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp CCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 9999999998886543 488999999999999999999999 999999999999995 4567999999999876
Q ss_pred cCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhH
Q 041438 630 NLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQ 709 (752)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (752)
... ......+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.. ....+....+.......+...+.
T Consensus 175 ~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~-----~~~~~~~~~i~~~~~~~~~~~~~ 247 (486)
T 3mwu_A 175 QQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG-----KNEYDILKRVETGKYAFDLPQWR 247 (486)
T ss_dssp CCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHTCCCSCSGGGG
T ss_pred CCC-CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCC-----CCHHHHHHHHHhCCCCCCCcccC
Confidence 533 23344689999999999876 589999999999999999999999852 22233444555555555554556
Q ss_pred HHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 710 NKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 710 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
..++++.++|.+||+.||++|||+.|+++|
T Consensus 248 ~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 248 TISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 677889999999999999999999999987
No 191
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=4.4e-37 Score=321.76 Aligned_cols=235 Identities=22% Similarity=0.325 Sum_probs=188.7
Q ss_pred HhhcccccceeeccCCceEEEEEEeC-CCcEEEEEccCCCCCC-----------------------CccccCCceEEEEE
Q 041438 498 RATNDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSPLPD-----------------------NFCSHPRQSFIVYE 553 (752)
Q Consensus 498 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~lV~E 553 (752)
...++|++.+.||+|+||.||+|+.. +++.||+|+++..... +++......++|||
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 35678999999999999999999954 5889999998754321 44566788999999
Q ss_pred eccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCC
Q 041438 554 YLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS 633 (752)
Q Consensus 554 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~ 633 (752)
|+++++|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.......
T Consensus 90 ~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 165 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165 (288)
T ss_dssp CCTTEEHHHHHHHCCT-TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred cCCCCcHHHHHHhccc-CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence 9999999999976432 4588999999999999999999999 99999999999999999999999999998765333
Q ss_pred CC-cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhccCCCCCChhhHHH
Q 041438 634 SN-WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNK 711 (752)
Q Consensus 634 ~~-~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (752)
.. .....+|+.|+|||++.+..++.++||||+|+++|+|++ |..||... ... .............. ....
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~-----~~~-~~~~~~~~~~~~~~--~~~~ 237 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLS-QVYELLEKDYRMER--PEGC 237 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----CGG-GHHHHHHTTCCCCC--CTTC
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----CHH-HHHHHHhccCCCCC--CCCC
Confidence 21 223457788999999998999999999999999999999 99998521 111 12222222211111 1344
Q ss_pred HHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 712 FMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 712 ~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
++.+.+++.+||+.||++|||++|+++.|+++.
T Consensus 238 ~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 238 PEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 567899999999999999999999999998764
No 192
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.4e-36 Score=320.73 Aligned_cols=229 Identities=22% Similarity=0.293 Sum_probs=185.3
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC------------------------CccccCCceEEEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD------------------------NFCSHPRQSFIVYE 553 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------------------------~~~~~~~~~~lV~E 553 (752)
..++|++.+.||+|+||.||+|+. .+|+.||+|+++..... +++......++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 356899999999999999999995 47999999998653211 34566788999999
Q ss_pred eccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEe---CCCCceEEeecccceecc
Q 041438 554 YLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLL---DLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 554 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll---~~~~~~kl~DfG~a~~~~ 630 (752)
|+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||.+....
T Consensus 87 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 87 LVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp CCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred cCCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 999999999986543 488899999999999999999999 99999999999999 778899999999997643
Q ss_pred CCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHH
Q 041438 631 LDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQN 710 (752)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (752)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||... ........+.......+......
T Consensus 161 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~ 233 (304)
T 2jam_A 161 N--GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE-----TESKLFEKIKEGYYEFESPFWDD 233 (304)
T ss_dssp C--BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHHHHHCCCCCCTTTTTT
T ss_pred C--CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHcCCCCCCcccccc
Confidence 2 2233457999999999999999999999999999999999999998521 12222333444433333322345
Q ss_pred HHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 041438 711 KFMSIMQVAFSCLDQNPVSRPTMKRFEVQS 740 (752)
Q Consensus 711 ~~~~l~~li~~cl~~dP~~Rps~~evl~~L 740 (752)
.++++.+++.+||+.||++|||++|+++|-
T Consensus 234 ~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 263 (304)
T 2jam_A 234 ISESAKDFICHLLEKDPNERYTCEKALSHP 263 (304)
T ss_dssp SCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhcCc
Confidence 567899999999999999999999999753
No 193
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.1e-36 Score=319.12 Aligned_cols=227 Identities=26% Similarity=0.357 Sum_probs=184.0
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------------CccccCCceEEEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-------------------------NFCSHPRQSFIVYE 553 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~lV~E 553 (752)
.+.|++.+.||+|+||.||+|+. .+++.||||++...... +++......++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 45699999999999999999984 57899999998654321 34455678899999
Q ss_pred eccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCC
Q 041438 554 YLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS 633 (752)
Q Consensus 554 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~ 633 (752)
|+++++|.+++... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||.+.......
T Consensus 101 ~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 173 (303)
T 3a7i_A 101 YLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 173 (303)
T ss_dssp CCTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred eCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccc
Confidence 99999999999653 488999999999999999999999 99999999999999999999999999998876544
Q ss_pred CCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHHHH
Q 041438 634 SNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKFM 713 (752)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (752)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+.....+.. ....+.
T Consensus 174 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~---~~~~~~ 245 (303)
T 3a7i_A 174 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH-----PMKVLFLIPKNNPPTL---EGNYSK 245 (303)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCCCCC---CSSCCH
T ss_pred cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC-----HHHHHHHhhcCCCCCC---ccccCH
Confidence 44445689999999999999999999999999999999999999985211 1111112222221111 123455
Q ss_pred HHHHHHHhccCcCCCCCCCHHHHHHHHh
Q 041438 714 SIMQVAFSCLDQNPVSRPTMKRFEVQSK 741 (752)
Q Consensus 714 ~l~~li~~cl~~dP~~Rps~~evl~~L~ 741 (752)
.+.+++.+||+.||++|||++|++++.-
T Consensus 246 ~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 246 PLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 7889999999999999999999998653
No 194
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=9.1e-37 Score=343.69 Aligned_cols=228 Identities=21% Similarity=0.311 Sum_probs=189.2
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC---------------------------CccccCCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD---------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------------------------~~~~~~~~~~lV 551 (752)
.++|++.+.||+|+||.||+|+. .+|+.||||++...... +++......|+|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 46899999999999999999995 48999999998543211 345567889999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEe---CCCCceEEeeccccee
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLL---DLGYEAHVSDFRIAKF 628 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll---~~~~~~kl~DfG~a~~ 628 (752)
|||+.+|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||++ +.++.+||+|||+++.
T Consensus 105 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp ECCCCSCBHHHHHHTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred EecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 99999999999887543 488999999999999999999999 99999999999999 5678999999999987
Q ss_pred ccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhh
Q 041438 629 LNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDV 708 (752)
Q Consensus 629 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (752)
.... ......+||+.|+|||++.+ .++.++||||+||++|+|++|++||.. .........+.......+...+
T Consensus 179 ~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~-----~~~~~~~~~i~~~~~~~~~~~~ 251 (484)
T 3nyv_A 179 FEAS-KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG-----ANEYDILKKVEKGKYTFELPQW 251 (484)
T ss_dssp BCCC-CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHCCCCCCSGGG
T ss_pred cccc-cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCC-----CCHHHHHHHHHcCCCCCCCccc
Confidence 6533 23345689999999998866 689999999999999999999999852 2223344555555555554455
Q ss_pred HHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 041438 709 QNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQS 740 (752)
Q Consensus 709 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 740 (752)
...++++.++|.+||+.||++|||++|+++|-
T Consensus 252 ~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~ 283 (484)
T 3nyv_A 252 KKVSESAKDLIRKMLTYVPSMRISARDALDHE 283 (484)
T ss_dssp GGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred ccCCHHHHHHHHHHCCCChhHCcCHHHHhhCh
Confidence 66778899999999999999999999999763
No 195
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.2e-36 Score=322.90 Aligned_cols=239 Identities=20% Similarity=0.291 Sum_probs=187.4
Q ss_pred HHHHhhcccccceeeccCCceEEEEEEe------CCCcEEEEEccCCCCCC--------------------------Ccc
Q 041438 495 EIIRATNDFDAKHCIGKGGHGSVYIARV------PSGEIFAVKKFHSPLPD--------------------------NFC 542 (752)
Q Consensus 495 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~--------------------------~~~ 542 (752)
++.-..++|++.+.||+|+||.||+|+. .+++.||||+++..... +++
T Consensus 21 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 100 (316)
T 2xir_A 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC 100 (316)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEE
Confidence 3444568999999999999999999973 35789999998654321 222
Q ss_pred cc-CCceEEEEEeccCCChHHHhccCcc-------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCC
Q 041438 543 SH-PRQSFIVYEYLESGSLDKILNNDAS-------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSK 608 (752)
Q Consensus 543 ~~-~~~~~lV~E~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~ 608 (752)
.. ....++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+
T Consensus 101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~ 177 (316)
T 2xir_A 101 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAAR 177 (316)
T ss_dssp CCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred ecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccc
Confidence 22 3458999999999999999986542 12278899999999999999999999 9999999999
Q ss_pred CEEeCCCCceEEeecccceeccCCCCC--cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhcc
Q 041438 609 NVLLDLGYEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEM 685 (752)
Q Consensus 609 NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~ 685 (752)
||+++.++.+||+|||+++........ .....||+.|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus 178 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~-- 255 (316)
T 2xir_A 178 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-- 255 (316)
T ss_dssp GEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--
T ss_pred eEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc--
Confidence 999999999999999999876543322 223467889999999999999999999999999999998 999985211
Q ss_pred ccccccchHhhhccC-CCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 686 SSSSSNMNIEILDSR-LPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 686 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
........+.... ...+ ...++++.+++.+||+.||++|||++|++++|+++.
T Consensus 256 --~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 256 --IDEEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp --CSHHHHHHHHHTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --hhHHHHHHhccCccCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1111122222221 2222 234567889999999999999999999999999875
No 196
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-36 Score=317.53 Aligned_cols=232 Identities=23% Similarity=0.298 Sum_probs=184.3
Q ss_pred hcccccce-eeccCCceEEEEEEe---CCCcEEEEEccCCCCCC-------------------------CccccCCceEE
Q 041438 500 TNDFDAKH-CIGKGGHGSVYIARV---PSGEIFAVKKFHSPLPD-------------------------NFCSHPRQSFI 550 (752)
Q Consensus 500 ~~~y~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~l 550 (752)
.++|.+.+ .||+|+||.||+|+. .+++.||||+++..... +++ ..+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 35676766 999999999999984 36788999998764321 223 3466899
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 87 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EEECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEEeCCCCCHHHHHHhCC--ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 999999999999997543 3488999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCC---cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhccC-CCCCC
Q 041438 631 LDSSN---WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDSR-LPYPS 705 (752)
Q Consensus 631 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~ 705 (752)
..... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||... ........+.... ...+
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-----~~~~~~~~i~~~~~~~~~- 235 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM-----KGPEVMAFIEQGKRMECP- 235 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-----CTHHHHHHHHTTCCCCCC-
T ss_pred cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC-----CHHHHHHHHhcCCcCCCC-
Confidence 43321 122356889999999988889999999999999999998 99998521 1122222222222 2222
Q ss_pred hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcC
Q 041438 706 LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYN 746 (752)
Q Consensus 706 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 746 (752)
...++++.+++.+||+.||++||+++|++++|+++.++
T Consensus 236 ---~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 236 ---PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp ---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 34566789999999999999999999999999988643
No 197
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-36 Score=326.58 Aligned_cols=232 Identities=22% Similarity=0.318 Sum_probs=172.5
Q ss_pred cccccceeeccCCceEEEEEEeC--C--CcEEEEEccCCCCCC-------------------------Ccc-ccCCceEE
Q 041438 501 NDFDAKHCIGKGGHGSVYIARVP--S--GEIFAVKKFHSPLPD-------------------------NFC-SHPRQSFI 550 (752)
Q Consensus 501 ~~y~~~~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~~-------------------------~~~-~~~~~~~l 550 (752)
..|++.+.||+|+||.||+|+.. + +..||||.++..... +++ ...+..++
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 45778899999999999999843 2 246899988643221 222 33467899
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
||||+++|+|.+++.... ..+++..+..++.||++||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 169 v~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EEECCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEECCCCCCHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccc
Confidence 999999999999997543 3478899999999999999999999 99999999999999999999999999998664
Q ss_pred CCCC----CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhccCCCCCC
Q 041438 631 LDSS----NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDSRLPYPS 705 (752)
Q Consensus 631 ~~~~----~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (752)
.... ......+|+.|+|||++.+..++.++|||||||++|||+| |.+||... ...+....+.........
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~-----~~~~~~~~~~~~~~~~~p 318 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-----NTFDITVYLLQGRRLLQP 318 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS-----CSSCHHHHHHTTCCCCCC
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCC-----CHHHHHHHHHcCCCCCCC
Confidence 3221 1123467789999999999999999999999999999999 67777421 122222223332222111
Q ss_pred hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 706 LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 706 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
..++..+.+++.+||+.||++|||++|++++|+++..
T Consensus 319 ---~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~ 355 (373)
T 3c1x_A 319 ---EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 355 (373)
T ss_dssp ---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 2345678999999999999999999999999998863
No 198
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-36 Score=326.76 Aligned_cols=232 Identities=20% Similarity=0.258 Sum_probs=175.7
Q ss_pred HhhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-----------------------------CccccCCc
Q 041438 498 RATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-----------------------------NFCSHPRQ 547 (752)
Q Consensus 498 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----------------------------~~~~~~~~ 547 (752)
...++|++.+.||+|+||.||+|+. .+|+.||||+++..... +++.+...
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 4567899999999999999999995 56999999998642110 34556678
Q ss_pred eEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccce
Q 041438 548 SFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAK 627 (752)
Q Consensus 548 ~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~ 627 (752)
.++||||+++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred eEEEEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 8999999987 8988887543 3478899999999999999999999 99999999999999999999999999998
Q ss_pred eccCCCCCcccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhcc-------
Q 041438 628 FLNLDSSNWSKLAGTHGNVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDS------- 699 (752)
Q Consensus 628 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~------- 699 (752)
.............||+.|+|||++.+. .++.++|||||||++|||++|.+||..... ......+...
T Consensus 161 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~-----~~~~~~i~~~~~~~~~~ 235 (346)
T 1ua2_A 161 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-----LDQLTRIFETLGTPTEE 235 (346)
T ss_dssp TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHHHCCCCTT
T ss_pred eccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHHHcCCCChh
Confidence 776554445556899999999998764 489999999999999999999999853211 0111111100
Q ss_pred ---------------CCC-CCC-hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 041438 700 ---------------RLP-YPS-LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQS 740 (752)
Q Consensus 700 ---------------~~~-~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 740 (752)
..+ .+. ......+.++.++|.+||+.||++|||++|+++|-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 000 000 00123346789999999999999999999999864
No 199
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3.9e-37 Score=320.61 Aligned_cols=237 Identities=22% Similarity=0.299 Sum_probs=185.1
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------Ccc--ccCCceE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFC--SHPRQSF 549 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~--~~~~~~~ 549 (752)
..++|++.+.||+|+||.||+|+. .+++.||+|++...... +++ ......+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 357899999999999999999995 47899999998654321 222 3456789
Q ss_pred EEEEeccCCChHHHhccCcc-ccccCHHHHHHHHHHHHHHHHHHHhCCCCC-----eeecCCCCCCEEeCCCCceEEeec
Q 041438 550 IVYEYLESGSLDKILNNDAS-AKELGWTQRLNVIKGVADALFYLHNNCFPP-----IVHWDISSKNVLLDLGYEAHVSDF 623 (752)
Q Consensus 550 lV~E~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~-----ivH~DlKp~NIll~~~~~~kl~Df 623 (752)
+||||+++++|.+++..... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+||
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 99999999999999975432 23489999999999999999999999 8 999999999999999999999999
Q ss_pred ccceeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCC
Q 041438 624 RIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPY 703 (752)
Q Consensus 624 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 703 (752)
|.++.............||+.|+|||++.+..++.++|||||||++|+|++|+.||... ........+.....+.
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----~~~~~~~~i~~~~~~~ 235 (279)
T 2w5a_A 161 GLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF-----SQKELAGKIREGKFRR 235 (279)
T ss_dssp CHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCC
T ss_pred chheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc-----CHHHHHHHHhhccccc
Confidence 99987654332233457899999999999888999999999999999999999998522 1122222333333221
Q ss_pred CChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcC
Q 041438 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYN 746 (752)
Q Consensus 704 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 746 (752)
.. ...+.++.+++.+||+.||++|||++|+++++......
T Consensus 236 ~~---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~ 275 (279)
T 2w5a_A 236 IP---YRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH 275 (279)
T ss_dssp CC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred CC---cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence 11 23456788999999999999999999999987665433
No 200
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.5e-36 Score=314.60 Aligned_cols=233 Identities=21% Similarity=0.338 Sum_probs=186.3
Q ss_pred hhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-----------------------CccccCCceEEEEEec
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-----------------------NFCSHPRQSFIVYEYL 555 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~lV~E~~ 555 (752)
..++|++.+.||+|+||.||+|+..+++.||||+++..... +++ ..+..++||||+
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~ 89 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYM 89 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSCEEEEECC
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEE-cCCCcEEEEecC
Confidence 45789999999999999999999888889999998754322 222 345689999999
Q ss_pred cCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCCCC
Q 041438 556 ESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN 635 (752)
Q Consensus 556 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 635 (752)
++++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||.+.........
T Consensus 90 ~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (279)
T 1qpc_A 90 ENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165 (279)
T ss_dssp TTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred CCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc
Confidence 9999999997532 22488999999999999999999999 9999999999999999999999999999876543211
Q ss_pred -cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhccC-CCCCChhhHHHH
Q 041438 636 -WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDSR-LPYPSLDVQNKF 712 (752)
Q Consensus 636 -~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 712 (752)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||... ...+....+.... ...+ ...+
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~----~~~~ 236 (279)
T 1qpc_A 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-----TNPEVIQNLERGYRMVRP----DNCP 236 (279)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC-----CHHHHHHHHHTTCCCCCC----TTCC
T ss_pred cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc-----CHHHHHHHHhcccCCCCc----cccc
Confidence 123356789999999988889999999999999999999 99998521 1111222222221 1111 2345
Q ss_pred HHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 713 MSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 713 ~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
.++.+++.+||+.||++|||++++++.|+++..
T Consensus 237 ~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 269 (279)
T 1qpc_A 237 EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (279)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 678999999999999999999999999998753
No 201
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-36 Score=317.97 Aligned_cols=229 Identities=23% Similarity=0.309 Sum_probs=174.6
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------------CccccCCceEEEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-------------------------NFCSHPRQSFIVYE 553 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~lV~E 553 (752)
.++|++.+.||+|+||.||+|+. .+++.||+|++...... +++......++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 46899999999999999999995 57899999988654321 44566788899999
Q ss_pred eccCCChHHHhccCc-cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEe---CCCCceEEeecccceec
Q 041438 554 YLESGSLDKILNNDA-SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLL---DLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 554 ~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll---~~~~~~kl~DfG~a~~~ 629 (752)
|+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++...
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 999999999886532 124588999999999999999999999 99999999999999 45678999999999876
Q ss_pred cCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhH
Q 041438 630 NLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQ 709 (752)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (752)
.... ......||+.|+|||++. ..++.++||||+||++|||++|+.||... .................. ...
T Consensus 178 ~~~~-~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~-----~~~~~~~~~~~~~~~~~~-~~~ 249 (285)
T 3is5_A 178 KSDE-HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT-----SLEEVQQKATYKEPNYAV-ECR 249 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCC---C
T ss_pred CCcc-cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC-----CHHHHHhhhccCCccccc-ccC
Confidence 5332 234457999999999875 56889999999999999999999998521 111111222212221111 112
Q ss_pred HHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 710 NKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 710 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
..++++.+++.+||+.||++|||++|+++|
T Consensus 250 ~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 250 PLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp CCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 245678899999999999999999999864
No 202
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.2e-36 Score=340.58 Aligned_cols=235 Identities=22% Similarity=0.313 Sum_probs=188.7
Q ss_pred hhcccccceeeccCCceEEEEEEeC-CCcEEEEEccCCCCCC-----------------------CccccCCceEEEEEe
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSPLPD-----------------------NFCSHPRQSFIVYEY 554 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~lV~E~ 554 (752)
..++|++.+.||+|+||.||+|+.. +++.||||+++..... +++......|+||||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 3567999999999999999999965 4889999998754322 455667889999999
Q ss_pred ccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCCC
Q 041438 555 LESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSS 634 (752)
Q Consensus 555 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~ 634 (752)
+++|+|.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 298 ~~~g~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 373 (495)
T 1opk_A 298 MTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY 373 (495)
T ss_dssp CTTCBHHHHHHHSCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE
T ss_pred cCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCce
Confidence 999999999976432 4488999999999999999999999 999999999999999999999999999987643221
Q ss_pred -CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhccCCCCCChhhHHHH
Q 041438 635 -NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKF 712 (752)
Q Consensus 635 -~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (752)
......++..|+|||++.+..++.++|||||||++|||+| |+.||.... .. .....+......+. ...++
T Consensus 374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~-----~~-~~~~~~~~~~~~~~--~~~~~ 445 (495)
T 1opk_A 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LS-QVYELLEKDYRMER--PEGCP 445 (495)
T ss_dssp ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-----GG-GHHHHHHTTCCCCC--CTTCC
T ss_pred eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC-----HH-HHHHHHHcCCCCCC--CCCCC
Confidence 1122356778999999998899999999999999999999 999985211 11 12222222222111 13456
Q ss_pred HHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 713 MSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 713 ~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
+++.++|.+||+.||++|||++|+++.|+.+..
T Consensus 446 ~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 446 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 678999999999999999999999999998743
No 203
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=328.28 Aligned_cols=240 Identities=16% Similarity=0.170 Sum_probs=182.8
Q ss_pred hcccccceeeccCCceEEEEEEeC---------CCcEEEEEccCCCCCC-------------------------------
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVP---------SGEIFAVKKFHSPLPD------------------------------- 539 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~---------~~~~vavK~~~~~~~~------------------------------- 539 (752)
.++|++.+.||+|+||.||+|+.. +++.||||++......
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~ 120 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIP 120 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCC
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhccCCccCcc
Confidence 468999999999999999999965 3889999988654211
Q ss_pred ---Cccc-cCCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCC
Q 041438 540 ---NFCS-HPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLG 615 (752)
Q Consensus 540 ---~~~~-~~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~ 615 (752)
+++. .....|+||||+ +++|.+++.... ...+++.+++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 121 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~~~~ 195 (352)
T 2jii_A 121 TCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFVDPE 195 (352)
T ss_dssp CCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEEETT
T ss_pred chhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEEcCC
Confidence 1122 257889999999 889999998652 24589999999999999999999999 99999999999999998
Q ss_pred C--ceEEeecccceeccCCCC-------CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccc
Q 041438 616 Y--EAHVSDFRIAKFLNLDSS-------NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMS 686 (752)
Q Consensus 616 ~--~~kl~DfG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~ 686 (752)
+ .+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 196 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 275 (352)
T 2jii_A 196 DQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT 275 (352)
T ss_dssp EEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCH
Confidence 8 899999999987653321 1133479999999999999999999999999999999999999986322100
Q ss_pred cccccchHhhhccCCCCC--ChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 687 SSSSNMNIEILDSRLPYP--SLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
.................. .......+.++.+++.+||+.||++|||++|+++.|+++.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 335 (352)
T 2jii_A 276 EDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL 335 (352)
T ss_dssp HHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence 000011111111111111 0011233567899999999999999999999999999886
No 204
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=5.5e-35 Score=314.54 Aligned_cols=303 Identities=25% Similarity=0.381 Sum_probs=266.9
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceee
Q 041438 84 GRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILH 163 (752)
Q Consensus 84 ~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 163 (752)
..+..+++.++.+... ..|..+++|++|+|++|+++++.+ |.++++|++|+|++|+++.. +.|.++++|++|+
T Consensus 44 ~~L~~L~l~~~~i~~~---~~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~ 116 (347)
T 4fmz_A 44 ESITKLVVAGEKVASI---QGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELY 116 (347)
T ss_dssp TTCSEEECCSSCCCCC---TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEE
T ss_pred ccccEEEEeCCccccc---hhhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEE
Confidence 4567788887776542 247889999999999999998655 99999999999999999864 4699999999999
Q ss_pred ccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCC
Q 041438 164 ISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNG 243 (752)
Q Consensus 164 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 243 (752)
|++|.+++..+ +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|++++
T Consensus 117 l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (347)
T 4fmz_A 117 LNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED 191 (347)
T ss_dssp CTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC
T ss_pred CcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc
Confidence 99999996544 9999999999999997665554 48999999999999999987655 8899999999999999987
Q ss_pred CcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCccc
Q 041438 244 AIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGEL 323 (752)
Q Consensus 244 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 323 (752)
..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.+++. ..+
T Consensus 192 ~~~----~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~ 261 (347)
T 4fmz_A 192 ISP----LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAV 261 (347)
T ss_dssp CGG----GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGG
T ss_pred ccc----ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhH
Confidence 654 5688999999999999997665 8899999999999999997655 89999999999999999864 568
Q ss_pred CCCcccceeeccccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccce
Q 041438 324 GSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEK 403 (752)
Q Consensus 324 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 403 (752)
..+++|++|++++|.+++. ..+..+++|+.|++++|++++..|..+..+++|++|+|++|++++..| +..+++|++
T Consensus 262 ~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~ 337 (347)
T 4fmz_A 262 KDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDS 337 (347)
T ss_dssp TTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSE
T ss_pred hcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccce
Confidence 9999999999999999986 468999999999999999999999999999999999999999998877 889999999
Q ss_pred EEccCCcCC
Q 041438 404 LNLSYNNLS 412 (752)
Q Consensus 404 L~L~~N~l~ 412 (752)
|++++|.|+
T Consensus 338 L~l~~N~i~ 346 (347)
T 4fmz_A 338 ADFANQVIK 346 (347)
T ss_dssp ESSSCC---
T ss_pred eehhhhccc
Confidence 999999986
No 205
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.4e-36 Score=335.99 Aligned_cols=173 Identities=19% Similarity=0.239 Sum_probs=148.7
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-----------------------------CccccCCceE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-----------------------------NFCSHPRQSF 549 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----------------------------~~~~~~~~~~ 549 (752)
..+|++.+.||+|+||.||+|+. .+++.||||+++..... +++......+
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 46799999999999999999984 56899999998653210 2344567889
Q ss_pred EEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCc--eEEeecccce
Q 041438 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYE--AHVSDFRIAK 627 (752)
Q Consensus 550 lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~--~kl~DfG~a~ 627 (752)
+||||+. ++|.+++..... ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++. +||+|||+|+
T Consensus 176 lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNKF-QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEECCCC-CBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEeccC-CCHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 9999997 599999876542 3489999999999999999999999 9999999999999999887 9999999998
Q ss_pred eccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcc
Q 041438 628 FLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD 680 (752)
Q Consensus 628 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~ 680 (752)
.... .....+||+.|+|||++.+..++.++|||||||++|||++|++||.
T Consensus 251 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~ 300 (429)
T 3kvw_A 251 YEHQ---RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP 300 (429)
T ss_dssp ETTC---CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred ecCC---cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCC
Confidence 7542 2334589999999999999999999999999999999999999985
No 206
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.4e-36 Score=324.23 Aligned_cols=239 Identities=23% Similarity=0.315 Sum_probs=185.6
Q ss_pred hcccccceeeccCCceEEEEEEe-----CCCcEEEEEccCCCCCC------------------------Ccc--ccCCce
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-----PSGEIFAVKKFHSPLPD------------------------NFC--SHPRQS 548 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~------------------------~~~--~~~~~~ 548 (752)
.++|++.+.||+|+||.||+|+. .+++.||||++...... +++ .+....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 46899999999999999999983 46889999998654211 122 245668
Q ss_pred EEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeeccccee
Q 041438 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKF 628 (752)
Q Consensus 549 ~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~ 628 (752)
++||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++.
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred EEEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccccee
Confidence 99999999999999997643 3488999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCC---cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhcc-----c--cc--cccchHhh
Q 041438 629 LNLDSSN---WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEM-----S--SS--SSNMNIEI 696 (752)
Q Consensus 629 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~-----~--~~--~~~~~~~~ 696 (752)
....... .....||+.|+|||++.+..+++++|||||||++|+|++|+.||...... . .. ........
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL 256 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 7543321 22346888899999999988999999999999999999999998532210 0 00 00111111
Q ss_pred hccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 697 LDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
.......+. ....++.+.+++.+||+.||++|||++|++++|+.+..
T Consensus 257 ~~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 257 LEEGQRLPA--PPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp HHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred hhcccCCCC--CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 222211111 13456678999999999999999999999999998753
No 207
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2e-36 Score=316.45 Aligned_cols=223 Identities=20% Similarity=0.264 Sum_probs=177.8
Q ss_pred hhcccccceeeccCCceEEEEEEeC-CCcEEEEEccCCCCCC---------------------------CccccCCceEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSPLPD---------------------------NFCSHPRQSFI 550 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---------------------------~~~~~~~~~~l 550 (752)
..++|++.+.||+|+||.||+|+.. +++.||||+++..... +++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4678999999999999999999964 7999999988654221 34556788999
Q ss_pred EEEeccCCChHHHhccCcc-ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCC--------------
Q 041438 551 VYEYLESGSLDKILNNDAS-AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLG-------------- 615 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~-------------- 615 (752)
||||+++++|.+++..... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 9999999999999976432 24488999999999999999999999 99999999999999844
Q ss_pred -----CceEEeecccceeccCCCCCcccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHhCCCCcchhhcccccc
Q 041438 616 -----YEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS 689 (752)
Q Consensus 616 -----~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~ 689 (752)
..+||+|||.+....... ...||+.|+|||++.+. .+++++|||||||++|||++|.+|+...
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------- 234 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG------- 234 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS-------
T ss_pred ccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch-------
Confidence 479999999998765332 24689999999998766 5678999999999999999999876311
Q ss_pred ccchHhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 690 SNMNIEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.....+.....+... ...++++.+++.+||+.||++|||++|+++|
T Consensus 235 -~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 235 -DQWHEIRQGRLPRIP---QVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp -HHHHHHHTTCCCCCS---SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -hHHHHHHcCCCCCCC---cccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 112222222222111 2345678899999999999999999999875
No 208
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-36 Score=322.58 Aligned_cols=234 Identities=22% Similarity=0.361 Sum_probs=176.3
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcE----EEEEccCCCCCC-------------------------CccccCCceE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEI----FAVKKFHSPLPD-------------------------NFCSHPRQSF 549 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~~~-------------------------~~~~~~~~~~ 549 (752)
.++|++.+.||+|+||.||+|+. .+++. ||+|.+...... +++. ....+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEE-SSSEE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEe-cCCce
Confidence 57899999999999999999984 45554 577766433211 2222 34578
Q ss_pred EEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 550 lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
+||||+.+|+|.+++.... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 93 ~v~~~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEECCCSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred EEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 9999999999999997643 3488999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCC--cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhccCCCCCCh
Q 041438 630 NLDSSN--WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDSRLPYPSL 706 (752)
Q Consensus 630 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 706 (752)
...... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||... ...............+.
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~------~~~~~~~~~~~~~~~~~- 240 (327)
T 3lzb_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI------PASEISSILEKGERLPQ- 240 (327)
T ss_dssp ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC------CGGGHHHHHHTTCCCCC-
T ss_pred cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCC------CHHHHHHHHHcCCCCCC-
Confidence 533222 223356788999999999999999999999999999999 99998521 11112222222221111
Q ss_pred hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcCC
Q 041438 707 DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNP 747 (752)
Q Consensus 707 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 747 (752)
....+.++.+++.+||+.||++||+++|+++.|+++...|
T Consensus 241 -~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 241 -PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp -CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred -CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 1234567889999999999999999999999999886543
No 209
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=3e-36 Score=324.99 Aligned_cols=232 Identities=19% Similarity=0.274 Sum_probs=173.6
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------Ccccc--------
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSH-------- 544 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~-------- 544 (752)
.++|++.+.||+|+||.||+|+. .+|+.||||++...... +++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 47899999999999999999995 67999999988544321 11111
Q ss_pred CCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecc
Q 041438 545 PRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFR 624 (752)
Q Consensus 545 ~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG 624 (752)
.+..++||||+++ ++.+.+.... ..+++.+++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CceEEEEEeccCC-CHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence 4568999999986 7777776543 3488999999999999999999999 99999999999999999999999999
Q ss_pred cceeccCCC----CCcccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhcc
Q 041438 625 IAKFLNLDS----SNWSKLAGTHGNVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDS 699 (752)
Q Consensus 625 ~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 699 (752)
+++...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..........
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~i~~~~~~ 247 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ--LALISQLCGS 247 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCC
Confidence 998765322 22234578999999998876 4579999999999999999999999853211000 0000000000
Q ss_pred ----------------CC-----CCCChh----hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 700 ----------------RL-----PYPSLD----VQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 700 ----------------~~-----~~~~~~----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.. ...... ....++.+.+++.+||+.||++|||++|+++|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 248 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00 000000 00113568899999999999999999999986
No 210
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=8.5e-37 Score=319.78 Aligned_cols=227 Identities=21% Similarity=0.321 Sum_probs=178.6
Q ss_pred hcccccceeeccCCceEEEEEEeC-CC-------cEEEEEccCCCCCC------------------------CccccCCc
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVP-SG-------EIFAVKKFHSPLPD------------------------NFCSHPRQ 547 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~------------------------~~~~~~~~ 547 (752)
.++|++.+.||+|+||.||+|+.. ++ ..||+|++...... +++...+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 468999999999999999999843 33 47999988543221 44556778
Q ss_pred eEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCc--------eE
Q 041438 548 SFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYE--------AH 619 (752)
Q Consensus 548 ~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~--------~k 619 (752)
.++||||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +|
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~k 161 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIK 161 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred CEEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceee
Confidence 899999999999999997653 3488899999999999999999999 9999999999999998877 99
Q ss_pred EeecccceeccCCCCCcccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCC-cchhhccccccccchHhhh
Q 041438 620 VSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHP-RDFLFEMSSSSSNMNIEIL 697 (752)
Q Consensus 620 l~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~elltg~~p-f~~~~~~~~~~~~~~~~~~ 697 (752)
|+|||.+..... .....||+.|+|||++.+ ..++.++|||||||++|||++|..| |.. ..........
T Consensus 162 l~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~------~~~~~~~~~~ 231 (289)
T 4fvq_A 162 LSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA------LDSQRKLQFY 231 (289)
T ss_dssp ECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTT------SCHHHHHHHH
T ss_pred eccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccc------cchHHHHHHh
Confidence 999999875432 233468899999999887 6689999999999999999996554 421 1111122222
Q ss_pred ccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 698 DSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 698 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
......+. ..+.++.+++.+||+.||++|||++|++++|+++..
T Consensus 232 ~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 232 EDRHQLPA----PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp HTTCCCCC----CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred hccCCCCC----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 22222221 123457899999999999999999999999999854
No 211
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=4.3e-36 Score=339.61 Aligned_cols=228 Identities=22% Similarity=0.303 Sum_probs=185.8
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------------------------C
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-------------------------------------N 540 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------------------~ 540 (752)
..++|++.++||+|+||.||+|+. .+++.||||++...... +
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 357899999999999999999995 56899999998643210 3
Q ss_pred ccccCCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCC---c
Q 041438 541 FCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGY---E 617 (752)
Q Consensus 541 ~~~~~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~---~ 617 (752)
++......|+|||||++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 4566788999999999999999886543 488999999999999999999999 999999999999998775 6
Q ss_pred eEEeecccceeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhh
Q 041438 618 AHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEIL 697 (752)
Q Consensus 618 ~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 697 (752)
+||+|||+++..... .......||+.|+|||++. ..++.++||||+||++|+|++|+.||.. .........+.
T Consensus 188 ~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~-----~~~~~~~~~i~ 260 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGG-----QNDQDIIKKVE 260 (504)
T ss_dssp EEECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHH
T ss_pred EEEEECCCCEEcCCC-CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCC-----CCHHHHHHHHH
Confidence 999999999877543 2334568999999999876 4689999999999999999999999852 22333445555
Q ss_pred ccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 698 DSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 698 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
......+...+...++++.+++.+||++||++|||++|+++|
T Consensus 261 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 261 KGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 555555544445667789999999999999999999999976
No 212
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.3e-36 Score=318.45 Aligned_cols=230 Identities=25% Similarity=0.308 Sum_probs=178.5
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC----------------------CccccCCceEEEEEec
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD----------------------NFCSHPRQSFIVYEYL 555 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----------------------~~~~~~~~~~lV~E~~ 555 (752)
..++|++.+.||+|+||.||+|+. .+|+.||||++...... +++...+..++||||+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 106 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC 106 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence 457899999999999999999995 46999999988654321 3445567889999999
Q ss_pred cCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCCCC
Q 041438 556 ESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN 635 (752)
Q Consensus 556 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 635 (752)
++++|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||.+.........
T Consensus 107 ~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 181 (314)
T 3com_A 107 GAGSVSDIIRLRN--KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAK 181 (314)
T ss_dssp TTEEHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSC
T ss_pred CCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccc
Confidence 9999999986432 3488999999999999999999999 9999999999999999999999999999877644444
Q ss_pred cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHHHHHH
Q 041438 636 WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKFMSI 715 (752)
Q Consensus 636 ~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 715 (752)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ......+.....+.. ......+..+
T Consensus 182 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~l 255 (314)
T 3com_A 182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP-----MRAIFMIPTNPPPTF-RKPELWSDNF 255 (314)
T ss_dssp BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHSCCCCC-SSGGGSCHHH
T ss_pred cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHhcCCCccc-CCcccCCHHH
Confidence 4456899999999999998999999999999999999999999852111 111111111111111 1123345678
Q ss_pred HHHHHhccCcCCCCCCCHHHHHHH
Q 041438 716 MQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 716 ~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.+++.+||+.||++|||++|+++|
T Consensus 256 ~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 256 TDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp HHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred HHHHHHHccCChhhCcCHHHHHhC
Confidence 999999999999999999999875
No 213
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.7e-36 Score=336.30 Aligned_cols=233 Identities=23% Similarity=0.358 Sum_probs=182.4
Q ss_pred hhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-----------------------CccccCCceEEEEEec
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-----------------------NFCSHPRQSFIVYEYL 555 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~lV~E~~ 555 (752)
..++|++.+.||+|+||.||+|+...+..||||+++..... +++. .+..++||||+
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~iv~e~~ 260 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 260 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEc-CCceEEEehhh
Confidence 45689999999999999999999888888999998764322 2233 36789999999
Q ss_pred cCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCCCC
Q 041438 556 ESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN 635 (752)
Q Consensus 556 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 635 (752)
++|+|.+++.... ...+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++........
T Consensus 261 ~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 336 (452)
T 1fmk_A 261 SKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336 (452)
T ss_dssp TTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred cCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCcee
Confidence 9999999997532 23488999999999999999999999 9999999999999999999999999999876532211
Q ss_pred -cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhcc-CCCCCChhhHHHH
Q 041438 636 -WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDS-RLPYPSLDVQNKF 712 (752)
Q Consensus 636 -~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 712 (752)
.....++..|+|||++.+..++.++|||||||++|||+| |+.||... ...+....+... +.+.+ ..++
T Consensus 337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~-----~~~~~~~~i~~~~~~~~~----~~~~ 407 (452)
T 1fmk_A 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-----VNREVLDQVERGYRMPCP----PECP 407 (452)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC-----CHHHHHHHHHTTCCCCCC----TTSC
T ss_pred cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHcCCCCCCC----CCCC
Confidence 123356789999999998999999999999999999999 99998521 111222222222 22222 3456
Q ss_pred HHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 713 MSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 713 ~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
+.+.++|.+||+.||++|||++++++.|+++..
T Consensus 408 ~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 408 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 678999999999999999999999999999854
No 214
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-36 Score=324.56 Aligned_cols=229 Identities=19% Similarity=0.261 Sum_probs=169.9
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccC------C
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHP------R 546 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~------~ 546 (752)
.++|++.+.||+|+||.||+|+. .+|+.||||++...... +++... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 56899999999999999999995 67999999998654322 122222 3
Q ss_pred ceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccc
Q 041438 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIA 626 (752)
Q Consensus 547 ~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a 626 (752)
..|+||||+ +++|.+++... .+++..+..++.||++||+|||+. ||+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 175 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLA 175 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecc
Confidence 569999999 77999998753 388999999999999999999999 9999999999999999999999999999
Q ss_pred eeccCCCCCcccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCcchhhcccc----------ccc-----
Q 041438 627 KFLNLDSSNWSKLAGTHGNVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS----------SSS----- 690 (752)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~----------~~~----- 690 (752)
+..... ....+||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ ...
T Consensus 176 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 176 RQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp EECCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred cccccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 876432 344688999999999877 6789999999999999999999999863211000 000
Q ss_pred ---cchHhhhccCCCCCC----hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 691 ---NMNIEILDSRLPYPS----LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 691 ---~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.............+. ......++.+.+++.+||+.||++|||++|+++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000000000000000 0112345678999999999999999999999986
No 215
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=5e-36 Score=311.60 Aligned_cols=229 Identities=23% Similarity=0.303 Sum_probs=181.9
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------------CccccCCceEEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-------------------------NFCSHPRQSFIVY 552 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~lV~ 552 (752)
..++|++.+.||+|+||.||+|+. .+++.||||++...... +++.+.+..++||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 457899999999999999999995 47899999987543211 3445667889999
Q ss_pred EeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCC
Q 041438 553 EYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLD 632 (752)
Q Consensus 553 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~ 632 (752)
||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 85 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 85 EYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp ECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred EecCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 9999999999987543 488899999999999999999999 9999999999999999999999999999876432
Q ss_pred C--CCcccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhH
Q 041438 633 S--SNWSKLAGTHGNVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQ 709 (752)
Q Consensus 633 ~--~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (752)
. .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.... ................+ ...
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~~~--~~~ 232 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS----DSCQEYSDWKEKKTYLN--PWK 232 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSC----TTSHHHHHHHTTCTTST--TGG
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCc----hHHHHHHHhhhcccccC--chh
Confidence 2 12234578999999999987765 789999999999999999999985211 11111222222222111 123
Q ss_pred HHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 710 NKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 710 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
..+..+.+++.+||+.||++|||++|+++|
T Consensus 233 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 233 KIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred hcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 456678899999999999999999999875
No 216
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.7e-36 Score=316.75 Aligned_cols=223 Identities=25% Similarity=0.374 Sum_probs=183.1
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCC---------------------------CCccccCCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLP---------------------------DNFCSHPRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---------------------------~~~~~~~~~~~lV 551 (752)
.++|++.+.||+|+||.||+|+. .+++.||||++..... .+++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 57899999999999999999995 4688999998743210 0445567889999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 93 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 99999999999997543 488899999999999999999999 999999999999999999999999999976543
Q ss_pred CCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHH
Q 041438 632 DSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNK 711 (752)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (752)
. ......|++.|+|||++.+..++.++||||||+++|+|++|+.||... ........+.......+ ...
T Consensus 167 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~~~~~~~~~~~~~~~----~~~ 235 (284)
T 2vgo_A 167 L--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP-----SHTETHRRIVNVDLKFP----PFL 235 (284)
T ss_dssp S--CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTTCCCCC----TTS
T ss_pred c--ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCC-----CHhHHHHHHhccccCCC----CcC
Confidence 2 223457999999999999999999999999999999999999998521 12222333444444443 234
Q ss_pred HHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 712 FMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 712 ~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
+.++.+++.+||+.||++|||++|+++|
T Consensus 236 ~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 236 SDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred CHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 5578899999999999999999999975
No 217
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.2e-36 Score=325.20 Aligned_cols=235 Identities=22% Similarity=0.327 Sum_probs=174.5
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccCCceEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV 551 (752)
..++|++.+.||+|+||.||+|+. .+|+.||||++...... +++...+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 357899999999999999999995 46899999987543322 445667889999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
|||++++++.++..... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.++....
T Consensus 103 ~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp EECCSEEHHHHHHHSTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EecCCcchHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 99999988888865433 388999999999999999999999 999999999999999999999999999987665
Q ss_pred CCCCcccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHhCCCCcchhhccccccc---------cchHhh-----
Q 041438 632 DSSNWSKLAGTHGNVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSS---------NMNIEI----- 696 (752)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~---------~~~~~~----- 696 (752)
.........||+.|+|||++.+. .++.++||||+||++|||++|+.||........... ......
T Consensus 177 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 177 PGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred CccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcc
Confidence 44444556899999999998875 689999999999999999999999853211000000 000000
Q ss_pred --hccCCC---CCC---hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 697 --LDSRLP---YPS---LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 697 --~~~~~~---~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.....+ ... ......++.+.+++.+||+.||++|||++|+++|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000 000 0112345679999999999999999999999875
No 218
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=6.1e-36 Score=314.71 Aligned_cols=229 Identities=20% Similarity=0.282 Sum_probs=186.5
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC----------------------------------Cccc
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD----------------------------------NFCS 543 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----------------------------------~~~~ 543 (752)
..++|++.+.||+|+||.||+|+. .+|+.||||+++..... +++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 467899999999999999999995 57899999988543210 3455
Q ss_pred cCCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeec
Q 041438 544 HPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDF 623 (752)
Q Consensus 544 ~~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~Df 623 (752)
.....++||||+++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecc
Confidence 667889999999999999999754 3488899999999999999999999 9999999999999999999999999
Q ss_pred ccceeccCCCCCcccccCCCCccCccccc------cCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhh
Q 041438 624 RIAKFLNLDSSNWSKLAGTHGNVAPELAY------TMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEIL 697 (752)
Q Consensus 624 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 697 (752)
|.+....... ......|++.|+|||++. ...++.++|||||||++|||++|+.||.. .........+.
T Consensus 169 g~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~-----~~~~~~~~~~~ 242 (298)
T 1phk_A 169 GFSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH-----RKQMLMLRMIM 242 (298)
T ss_dssp TTCEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHH
T ss_pred cchhhcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcC-----ccHHHHHHHHh
Confidence 9998765332 334457999999999875 45688999999999999999999999852 11222333344
Q ss_pred ccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 698 DSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 698 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
......+.......+..+.+++.+||+.||++|||++|+++|
T Consensus 243 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 243 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp HTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred cCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 444444433335567789999999999999999999999864
No 219
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-36 Score=321.17 Aligned_cols=233 Identities=28% Similarity=0.410 Sum_probs=179.1
Q ss_pred hcccccceeeccCCceEEEEEEeCC-----CcEEEEEccCCCCCC-------------------------CccccCCceE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVPS-----GEIFAVKKFHSPLPD-------------------------NFCSHPRQSF 549 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-------------------------~~~~~~~~~~ 549 (752)
.++|++.+.||+|+||.||+|+... +..||||+++..... +++...+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 4578889999999999999998532 346999998754221 3455677899
Q ss_pred EEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 550 lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
+||||+++|+|.+++.... ..+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 123 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 9999999999999997543 3488999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCC---cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhcc-CCCCC
Q 041438 630 NLDSSN---WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDS-RLPYP 704 (752)
Q Consensus 630 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~ 704 (752)
...... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||... ........+... ..+.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~-----~~~~~~~~~~~~~~~~~~ 272 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL-----SNHEVMKAINDGFRLPTP 272 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHHHTTCCCCCC
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC-----CHHHHHHHHHCCCcCCCc
Confidence 543221 122356788999999998899999999999999999999 99998521 111222222222 22222
Q ss_pred ChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcC
Q 041438 705 SLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYN 746 (752)
Q Consensus 705 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 746 (752)
...+..+.+++.+||+.||++||+++|++++|+++...
T Consensus 273 ----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 273 ----MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp ----TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 23456788999999999999999999999999987643
No 220
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3e-36 Score=320.39 Aligned_cols=233 Identities=23% Similarity=0.301 Sum_probs=181.6
Q ss_pred cccceeeccCCceEEEEEEe-----CCCcEEEEEccCCCCCC-------------------------Ccccc--CCceEE
Q 041438 503 FDAKHCIGKGGHGSVYIARV-----PSGEIFAVKKFHSPLPD-------------------------NFCSH--PRQSFI 550 (752)
Q Consensus 503 y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~-------------------------~~~~~--~~~~~l 550 (752)
|++.+.||+|+||.||++.+ .+++.||||+++..... +++.. ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 48999999999999998863 36889999998764321 22322 467899
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
||||+++|+|.+++.... +++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 113 v~e~~~~~~L~~~l~~~~----~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp EECCCTTCBHHHHGGGSC----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EEecccCCcHHHHHhhCC----CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 999999999999997643 88999999999999999999999 99999999999999999999999999999875
Q ss_pred CCCCC---cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccc----cc-----cccchHhhhc
Q 041438 631 LDSSN---WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMS----SS-----SSNMNIEILD 698 (752)
Q Consensus 631 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~----~~-----~~~~~~~~~~ 698 (752)
..... .....+|..|+|||++.+..++.++||||+||++|||+||+.||....... .. ..........
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 43321 223467888999999999899999999999999999999999986322100 00 0001112222
Q ss_pred cCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 699 SRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 699 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
.....+. ....+.++.+++.+||+.||++|||++|+++.|+++.
T Consensus 266 ~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 266 RGERLPR--PDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp TTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccCCCC--CccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 2222111 1345567999999999999999999999999999875
No 221
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=4.8e-36 Score=312.82 Aligned_cols=231 Identities=21% Similarity=0.285 Sum_probs=180.3
Q ss_pred hhcccccceeeccCCceEEEEEEeCC----CcEEEEEccCCCCCC-------------------------CccccCCceE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPS----GEIFAVKKFHSPLPD-------------------------NFCSHPRQSF 549 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-------------------------~~~~~~~~~~ 549 (752)
..++|++.+.||+|+||.||+|+... +..||+|.++..... +++ ..+..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGII-EEEPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEE-CSSSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEE-cCCCCE
Confidence 45789999999999999999998432 346999998764221 222 245678
Q ss_pred EEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 550 lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
+||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 89 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp EEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred EEEecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccc
Confidence 9999999999999997543 3488899999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCC-CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhcc-CCCCCCh
Q 041438 630 NLDSS-NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDS-RLPYPSL 706 (752)
Q Consensus 630 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 706 (752)
..... ......+++.|+|||++.+..++.++|||||||++|||+| |+.||... ........+... ..+.+
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~-----~~~~~~~~~~~~~~~~~~-- 236 (281)
T 3cc6_A 164 EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL-----ENKDVIGVLEKGDRLPKP-- 236 (281)
T ss_dssp ---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CGGGHHHHHHHTCCCCCC--
T ss_pred ccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccC-----ChHHHHHHHhcCCCCCCC--
Confidence 53322 1223467889999999998899999999999999999998 99998521 111122222221 22222
Q ss_pred hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 707 DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 707 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
...++.+.+++.+||+.||++|||++|++++|+++.
T Consensus 237 --~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 237 --DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 234567889999999999999999999999999874
No 222
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=7.7e-36 Score=314.03 Aligned_cols=234 Identities=22% Similarity=0.301 Sum_probs=180.8
Q ss_pred hhcccccceeeccCCceEEEEEEeCC----CcEEEEEccCCCCCC-------------------------Cc-cccCCce
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPS----GEIFAVKKFHSPLPD-------------------------NF-CSHPRQS 548 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-------------------------~~-~~~~~~~ 548 (752)
...+|++.+.||+|+||.||+|+..+ ...||+|.+...... ++ ....+..
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (298)
T 3f66_A 23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 102 (298)
T ss_dssp GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence 45678999999999999999998532 336899987653221 22 3345678
Q ss_pred EEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeeccccee
Q 041438 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKF 628 (752)
Q Consensus 549 ~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~ 628 (752)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||.++.
T Consensus 103 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 103 LVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEEEECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEEEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccc
Confidence 99999999999999997543 3478899999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCC----CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhccCCCC
Q 041438 629 LNLDSS----NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDSRLPY 703 (752)
Q Consensus 629 ~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 703 (752)
...... ......+|+.|+|||.+.+..+++++||||+||++|||++ |.+||.. .........+.......
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 252 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-----VNTFDITVYLLQGRRLL 252 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT-----SCTTTHHHHHHTTCCCC
T ss_pred ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCcc-----CCHHHHHHHHhcCCCCC
Confidence 643221 1223467889999999999999999999999999999999 5556531 11222222222222222
Q ss_pred CChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 704 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
.. ...+..+.+++.+||+.||++|||++|+++.|+++..
T Consensus 253 ~~---~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 253 QP---EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CC---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11 2345578899999999999999999999999999864
No 223
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.9e-36 Score=328.99 Aligned_cols=176 Identities=20% Similarity=0.253 Sum_probs=148.0
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-----------------------------CccccCCce
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-----------------------------NFCSHPRQS 548 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----------------------------~~~~~~~~~ 548 (752)
..++|++.+.||+|+||.||+|+. .+++.||||+++..... +++...+..
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 467899999999999999999985 47889999998643210 233456788
Q ss_pred EEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeC--CCCceEEeecccc
Q 041438 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLD--LGYEAHVSDFRIA 626 (752)
Q Consensus 549 ~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~--~~~~~kl~DfG~a 626 (752)
++||||+.+ +|.+++..... ..+++..++.++.|++.||.|||++ ..+|+||||||+|||++ .++.+||+|||+|
T Consensus 132 ~lv~e~~~~-~L~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 132 CLVFEMLSY-NLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEECCCC-BHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEEecCCC-CHHHHHhhcCc-CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 999999975 99999976532 3488999999999999999999942 11999999999999994 4778999999999
Q ss_pred eeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcc
Q 041438 627 KFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD 680 (752)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~ 680 (752)
+..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus 209 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~ 259 (382)
T 2vx3_A 209 CQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS 259 (382)
T ss_dssp EETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred eecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 876432 334689999999999999999999999999999999999999996
No 224
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=6e-36 Score=317.23 Aligned_cols=236 Identities=20% Similarity=0.294 Sum_probs=175.4
Q ss_pred HhhcccccceeeccCCceEEEEEEeC----CCcEEEEEccCCCCCC--------------------------CccccCC-
Q 041438 498 RATNDFDAKHCIGKGGHGSVYIARVP----SGEIFAVKKFHSPLPD--------------------------NFCSHPR- 546 (752)
Q Consensus 498 ~~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~--------------------------~~~~~~~- 546 (752)
...++|++.+.||+|+||.||+|+.. +++.||||+++..... +++....
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 35678999999999999999999843 4558999998754321 1222222
Q ss_pred ----ceEEEEEeccCCChHHHhccC---ccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceE
Q 041438 547 ----QSFIVYEYLESGSLDKILNND---ASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAH 619 (752)
Q Consensus 547 ----~~~lV~E~~~~g~L~~~l~~~---~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~k 619 (752)
..++||||+++|+|.+++... .....+++..++.++.||++||.|||+. +|+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEE
Confidence 459999999999999998532 1234589999999999999999999999 999999999999999999999
Q ss_pred EeecccceeccCCCC--CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhh
Q 041438 620 VSDFRIAKFLNLDSS--NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEI 696 (752)
Q Consensus 620 l~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~ 696 (752)
|+|||+++....... ......+++.|+|||.+.+..++.++|||||||++|||++ |..||... ........+
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-----~~~~~~~~~ 262 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGV-----QNHEMYDYL 262 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----CGGGHHHHH
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccC-----CHHHHHHHH
Confidence 999999987643321 1223467889999999999999999999999999999999 88998521 122222223
Q ss_pred hccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 697 LDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
........ ....++++.+++.+||+.||++|||+++++++|+++.
T Consensus 263 ~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 263 LHGHRLKQ---PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp HTTCCCCC---BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HcCCCCCC---CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 22221111 1345567899999999999999999999999999875
No 225
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=3.7e-36 Score=313.17 Aligned_cols=230 Identities=25% Similarity=0.343 Sum_probs=177.5
Q ss_pred hhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC----------------------Cc-cccCCceEEEEEec
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD----------------------NF-CSHPRQSFIVYEYL 555 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~-~~~~~~~~lV~E~~ 555 (752)
..++|++.+.||+|+||.||+|+. +|+.||||+++..... ++ ....+..++||||+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred ChhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 357899999999999999999987 5889999998754321 22 23345789999999
Q ss_pred cCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCCCC
Q 041438 556 ESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN 635 (752)
Q Consensus 556 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 635 (752)
++++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--- 170 (278)
T 1byg_A 98 AKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 170 (278)
T ss_dssp TTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc---
Confidence 9999999997543 23378899999999999999999999 9999999999999999999999999999865432
Q ss_pred cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhccC-CCCCChhhHHHHH
Q 041438 636 WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDSR-LPYPSLDVQNKFM 713 (752)
Q Consensus 636 ~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 713 (752)
.....+++.|+|||++.+..+++++||||||+++|||+| |+.||... ........+.... ...+ ...++
T Consensus 171 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~-----~~~~~~~~~~~~~~~~~~----~~~~~ 241 (278)
T 1byg_A 171 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPRVEKGYKMDAP----DGCPP 241 (278)
T ss_dssp -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS-----CGGGHHHHHTTTCCCCCC----TTCCH
T ss_pred ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHhcCCCCCCc----ccCCH
Confidence 223467889999999998899999999999999999998 99998521 1112222222221 1111 34556
Q ss_pred HHHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 714 SIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 714 ~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
.+.+++.+||+.||++|||++|+++.|+++..
T Consensus 242 ~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 242 AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 78999999999999999999999999998753
No 226
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.9e-36 Score=329.83 Aligned_cols=220 Identities=17% Similarity=0.104 Sum_probs=169.8
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------------------------C
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-------------------------------------N 540 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------------------~ 540 (752)
..++|++.+.||+|+||.||+|+. .+|+.||||++...... +
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 357899999999999999999994 67999999998532110 0
Q ss_pred ccccCC-----------------ceEEEEEeccCCChHHHhccCcc----ccccCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 041438 541 FCSHPR-----------------QSFIVYEYLESGSLDKILNNDAS----AKELGWTQRLNVIKGVADALFYLHNNCFPP 599 (752)
Q Consensus 541 ~~~~~~-----------------~~~lV~E~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ 599 (752)
++..++ ..|+||||+ +|+|.+++..... ...+++..+..|+.||+.||+|||++ +
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 111111 378999999 5799999975421 12345688889999999999999999 9
Q ss_pred eeecCCCCCCEEeCCCCceEEeecccceeccCCCCCcccccCCCCccCccccccC-----------CCCCccchhhHHHH
Q 041438 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTM-----------KVTEKCDVYSFGVL 668 (752)
Q Consensus 600 ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~ksDIwSlGvi 668 (752)
|+||||||+|||++.++.+||+|||+|+... ......+| +.|+|||++.+. .++.++|||||||+
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~---~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG---ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETT---CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecC---CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999998643 23344577 999999999887 79999999999999
Q ss_pred HHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 669 ALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 669 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
+|||++|+.||..... ......+.... ...++++.+++.+||+.||++|||+.|+++|
T Consensus 303 l~elltg~~Pf~~~~~-----~~~~~~~~~~~--------~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 303 IYWIWCADLPITKDAA-----LGGSEWIFRSC--------KNIPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HHHHHHSSCCC-----------CCSGGGGSSC--------CCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred HHHHHHCCCCCccccc-----ccchhhhhhhc--------cCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 9999999999853211 11111221111 1234568899999999999999999999864
No 227
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=8.5e-36 Score=319.31 Aligned_cols=230 Identities=21% Similarity=0.284 Sum_probs=178.0
Q ss_pred hcccccceeeccCCceEEEEEEe--CCCcEEEEEccCCCCCC-----------------------------CccccCCce
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV--PSGEIFAVKKFHSPLPD-----------------------------NFCSHPRQS 548 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~-----------------------------~~~~~~~~~ 548 (752)
.++|++.+.||+|+||.||+|+. .+++.||||+++..... +++.+.+..
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 46899999999999999999985 46899999988642110 334566789
Q ss_pred EEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCC--------------
Q 041438 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDL-------------- 614 (752)
Q Consensus 549 ~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~-------------- 614 (752)
++||||+ +++|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGF-LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEcCC-CCCHHHHHHhcCC-CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccc
Confidence 9999999 7799999976542 3488999999999999999999999 9999999999999987
Q ss_pred -----CCceEEeecccceeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhcccccc
Q 041438 615 -----GYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS 689 (752)
Q Consensus 615 -----~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~ 689 (752)
++.+||+|||.++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-- 242 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH-- 242 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH--
T ss_pred cccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH--
Confidence 668999999999875432 2345799999999999999999999999999999999999999852211000
Q ss_pred ccchHhhhcc------------------CCCCC-------------------ChhhHHHHHHHHHHHHhccCcCCCCCCC
Q 041438 690 SNMNIEILDS------------------RLPYP-------------------SLDVQNKFMSIMQVAFSCLDQNPVSRPT 732 (752)
Q Consensus 690 ~~~~~~~~~~------------------~~~~~-------------------~~~~~~~~~~l~~li~~cl~~dP~~Rps 732 (752)
.......... ...+. .......++++.+++.+||+.||++|||
T Consensus 243 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt 322 (339)
T 1z57_A 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRIT 322 (339)
T ss_dssp HHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred HHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccC
Confidence 0000000000 00000 0011245678999999999999999999
Q ss_pred HHHHHHH
Q 041438 733 MKRFEVQ 739 (752)
Q Consensus 733 ~~evl~~ 739 (752)
++|+++|
T Consensus 323 ~~ell~h 329 (339)
T 1z57_A 323 LREALKH 329 (339)
T ss_dssp HHHHTTS
T ss_pred HHHHhcC
Confidence 9999876
No 228
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.2e-34 Score=310.07 Aligned_cols=270 Identities=27% Similarity=0.315 Sum_probs=167.6
Q ss_pred CCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEc
Q 041438 109 PHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLIL 188 (752)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 188 (752)
++|++|+|++|+|+++.|..|+++++|++|+|++|++++..|..|.++++|++|+|++|+++ .+|..+. ++|++|+|
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 56667777777776666666777777777777777776666666666677777777777666 3444333 56666666
Q ss_pred cCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccC
Q 041438 189 DSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNIT 268 (752)
Q Consensus 189 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 268 (752)
++|++++..+..|.++++|++|+|++|.++..
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~------------------------------------------------ 162 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENS------------------------------------------------ 162 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGG------------------------------------------------
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccC------------------------------------------------
Confidence 66666655555566666666666666665420
Q ss_pred CCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhc
Q 041438 269 GNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLG 348 (752)
Q Consensus 269 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 348 (752)
+..|..+..+ +|++|++++|.+++ +|..+. ++|+.|++++|++++..+..|..+++|++|+|++|++++..+..|.
T Consensus 163 ~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 238 (332)
T 2ft3_A 163 GFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLS 238 (332)
T ss_dssp GSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGG
T ss_pred CCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhh
Confidence 1222222223 34444444444432 222222 3455555555555555555666666666666666666666666666
Q ss_pred ccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCccccc------ccccceEEccCCcCC--cCCchhhh
Q 041438 349 SLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICR------MESLEKLNLSYNNLS--GLIPRCFE 420 (752)
Q Consensus 349 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~------l~~L~~L~L~~N~l~--~~~p~~~~ 420 (752)
.+++|++|+|++|+++ .+|..+..+++|++|++++|++++..+..|+. ...|+.|++++|.+. +..|..|.
T Consensus 239 ~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~ 317 (332)
T 2ft3_A 239 FLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFR 317 (332)
T ss_dssp GCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGT
T ss_pred CCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCccccc
Confidence 6677777777777765 55666677777777777777777666666554 356888888888887 67778888
Q ss_pred ccCCCcEEEccCCc
Q 041438 421 ELHGLLHIDISYNK 434 (752)
Q Consensus 421 ~l~~L~~L~ls~N~ 434 (752)
.+++|+.+++++|+
T Consensus 318 ~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 318 CVTDRLAIQFGNYK 331 (332)
T ss_dssp TBCCSTTEEC----
T ss_pred ccchhhhhhccccc
Confidence 88888888888875
No 229
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.3e-34 Score=309.64 Aligned_cols=280 Identities=22% Similarity=0.285 Sum_probs=216.3
Q ss_pred CCcccceeeCCC----------CCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecC
Q 041438 72 LCTWSGIHCNHA----------GRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFL 141 (752)
Q Consensus 72 ~c~w~gv~C~~~----------~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 141 (752)
.|.|..+.|... ..+..++++++.+.+ +.+..|..+++|++|+|++|+|+++.|..|+++++|++|+|+
T Consensus 32 ~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 32 HCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISE-LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCc-cCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 478999999632 257789999888874 445679999999999999999999999999999999999999
Q ss_pred CCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCC--CcCCcCccCCCcceEEeeccccccc
Q 041438 142 TNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLG--GSIPRSLSNFTNLVFLYLYNNSFSG 219 (752)
Q Consensus 142 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~ 219 (752)
+|+++. +|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|.++ +..|..|..+ +|++|++++|++++
T Consensus 111 ~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLVE-IPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCCS-CCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCCc-cCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 999994 555444 89999999999999887888999999999999999996 4788888888 89999999999885
Q ss_pred cccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccc
Q 041438 220 SIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQL 299 (752)
Q Consensus 220 ~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 299 (752)
+|..+. ++|++|++++|.+++..+..+..+++|++|+|++|.+++..+..+
T Consensus 187 -l~~~~~----------------------------~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~ 237 (332)
T 2ft3_A 187 -IPKDLP----------------------------ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSL 237 (332)
T ss_dssp -CCSSSC----------------------------SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGG
T ss_pred -cCcccc----------------------------CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHh
Confidence 333221 345566777777776666777777777777888777777777777
Q ss_pred cCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhccc------ccccEEEcCCCcCc--cccchhc
Q 041438 300 GNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSL------VKLYYLNLSHNKLS--QQIPIEL 371 (752)
Q Consensus 300 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l------~~L~~L~Ls~N~l~--~~~p~~~ 371 (752)
..+++|+.|++++|+++ .+|..+..+++|++|+|++|+|+++.+..|... ..|+.|++++|.+. +..|..|
T Consensus 238 ~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~ 316 (332)
T 2ft3_A 238 SFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATF 316 (332)
T ss_dssp GGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGG
T ss_pred hCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccc
Confidence 77777777777777777 566667777777777777777777766666543 45667777777665 4556666
Q ss_pred cccccCCeeecCCcc
Q 041438 372 DNLIHLSELDLSHNF 386 (752)
Q Consensus 372 ~~l~~L~~L~Ls~N~ 386 (752)
..+++|+.|++++|+
T Consensus 317 ~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 317 RCVTDRLAIQFGNYK 331 (332)
T ss_dssp TTBCCSTTEEC----
T ss_pred cccchhhhhhccccc
Confidence 666666666666653
No 230
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.3e-36 Score=325.50 Aligned_cols=235 Identities=21% Similarity=0.292 Sum_probs=159.9
Q ss_pred hhcccccce-eeccCCceEEEEEEeC-CCcEEEEEccCCCCCC--------------------Ccccc----CCceEEEE
Q 041438 499 ATNDFDAKH-CIGKGGHGSVYIARVP-SGEIFAVKKFHSPLPD--------------------NFCSH----PRQSFIVY 552 (752)
Q Consensus 499 ~~~~y~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------------------~~~~~----~~~~~lV~ 552 (752)
..++|++.+ .||+|+||.||+|+.. +++.||||++...... +++.. ....++||
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 105 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIM 105 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEE
Confidence 367898855 6999999999999954 7999999988543111 12221 34579999
Q ss_pred EeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCC---CCceEEeecccceec
Q 041438 553 EYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDL---GYEAHVSDFRIAKFL 629 (752)
Q Consensus 553 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~---~~~~kl~DfG~a~~~ 629 (752)
||+++|+|.+++..... ..+++.+++.++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+++..
T Consensus 106 e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~ 181 (336)
T 3fhr_A 106 ECMEGGELFSRIQERGD-QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET 181 (336)
T ss_dssp ECCTTEEHHHHHHTC-C-CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred eccCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceec
Confidence 99999999999986542 3589999999999999999999999 9999999999999976 455999999999876
Q ss_pred cCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhH
Q 041438 630 NLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQ 709 (752)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (752)
... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||....... ........+.......+.....
T Consensus 182 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 258 (336)
T 3fhr_A 182 TQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQA-ISPGMKRRIRLGQYGFPNPEWS 258 (336)
T ss_dssp ------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------CCCTTTST
T ss_pred ccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchh-hhhhHHHhhhccccccCchhhc
Confidence 432 2334578999999999988889999999999999999999999985322111 0111111222222223322234
Q ss_pred HHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 041438 710 NKFMSIMQVAFSCLDQNPVSRPTMKRFEVQS 740 (752)
Q Consensus 710 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 740 (752)
..+.++.+++.+||+.||++|||++|+++|-
T Consensus 259 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 259 EVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp TCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred cCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 5567899999999999999999999999853
No 231
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.7e-34 Score=308.55 Aligned_cols=271 Identities=26% Similarity=0.318 Sum_probs=159.4
Q ss_pred CCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEc
Q 041438 109 PHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLIL 188 (752)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 188 (752)
++|++|+|++|+|+++.+..|+++++|++|+|++|++++..|..|.++++|++|+|++|+|+ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 45666666666666655555666666666666666666555555666666666666666655 3333332 45555555
Q ss_pred cCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccC
Q 041438 189 DSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNIT 268 (752)
Q Consensus 189 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 268 (752)
++|++++..+..|.++++|++|+|++|.++. .
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~------------------------------------------------~ 160 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKS------------------------------------------------S 160 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCG------------------------------------------------G
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCc------------------------------------------------c
Confidence 5555555444445555555555555555432 0
Q ss_pred CCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhc
Q 041438 269 GNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLG 348 (752)
Q Consensus 269 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 348 (752)
+..+..+..+++|++|++++|.++. +|..+. ++|+.|++++|++++..|..|..+++|++|+|++|.+++..+..|.
T Consensus 161 ~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 237 (330)
T 1xku_A 161 GIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLA 237 (330)
T ss_dssp GBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGG
T ss_pred CcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhcc
Confidence 1223333444444444444444442 222222 4556666666666655566666666666666666666666666666
Q ss_pred ccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccc------cccceEEccCCcCCc--CCchhhh
Q 041438 349 SLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRM------ESLEKLNLSYNNLSG--LIPRCFE 420 (752)
Q Consensus 349 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l------~~L~~L~L~~N~l~~--~~p~~~~ 420 (752)
.+++|++|+|++|+++ .+|..+..+++|++|+|++|++++..+..|+.. ..|+.|++++|.+.. +.|..|.
T Consensus 238 ~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~ 316 (330)
T 1xku_A 238 NTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFR 316 (330)
T ss_dssp GSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGT
T ss_pred CCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccc
Confidence 6666777777777665 556666667777777777777766666666433 677888888888764 6677888
Q ss_pred ccCCCcEEEccCCc
Q 041438 421 ELHGLLHIDISYNK 434 (752)
Q Consensus 421 ~l~~L~~L~ls~N~ 434 (752)
.+.+++.++|++|+
T Consensus 317 ~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 317 CVYVRAAVQLGNYK 330 (330)
T ss_dssp TCCCGGGEEC----
T ss_pred cccceeEEEecccC
Confidence 88888888888875
No 232
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=4.2e-36 Score=320.54 Aligned_cols=234 Identities=24% Similarity=0.362 Sum_probs=182.4
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEE--EEEccCCCCCC--------------------------CccccCCceEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIF--AVKKFHSPLPD--------------------------NFCSHPRQSFI 550 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~v--avK~~~~~~~~--------------------------~~~~~~~~~~l 550 (752)
.++|++.+.||+|+||.||+|+. .+++.+ |+|.++..... +++.+.+..|+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 47899999999999999999984 456654 99987542111 34456678899
Q ss_pred EEEeccCCChHHHhccCc-------------cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCc
Q 041438 551 VYEYLESGSLDKILNNDA-------------SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYE 617 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~ 617 (752)
||||+++|+|.+++.... ....+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 999999999999997653 123589999999999999999999999 9999999999999999999
Q ss_pred eEEeecccceeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhh
Q 041438 618 AHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEI 696 (752)
Q Consensus 618 ~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~ 696 (752)
+||+|||+++..... .......+++.|+|||++.+..++.++|||||||++|||+| |+.||... ........+
T Consensus 181 ~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~-----~~~~~~~~~ 254 (327)
T 1fvr_A 181 AKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-----TCAELYEKL 254 (327)
T ss_dssp EEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHG
T ss_pred EEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC-----cHHHHHHHh
Confidence 999999999754322 12223467889999999988889999999999999999998 99998521 111122222
Q ss_pred hcc-CCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcC
Q 041438 697 LDS-RLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYN 746 (752)
Q Consensus 697 ~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 746 (752)
... ....+ ...++++.+++.+||+.||++|||++|++++|+++...
T Consensus 255 ~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 255 PQGYRLEKP----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp GGTCCCCCC----TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred hcCCCCCCC----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 222 11122 23456789999999999999999999999999987643
No 233
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=5.7e-36 Score=318.76 Aligned_cols=228 Identities=23% Similarity=0.269 Sum_probs=178.4
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------------CccccCC
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------------NFCSHPR 546 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------------~~~~~~~ 546 (752)
.++|++.+.||+|+||.||+|+. .+++.||||++...... +++. .+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~ 87 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AE 87 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE-SS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc-CC
Confidence 46899999999999999999985 56899999988643210 2222 34
Q ss_pred ceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCc---eEEeec
Q 041438 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYE---AHVSDF 623 (752)
Q Consensus 547 ~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~---~kl~Df 623 (752)
..|+||||+++++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 88 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 88 DYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp SEEEEEECCTTEETHHHHSTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred ceEEEEecCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccC
Confidence 5899999999999999987543 488899999999999999999999 9999999999999987654 999999
Q ss_pred ccceeccCCCCCcccccCCCCccCccccc---cCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccC
Q 041438 624 RIAKFLNLDSSNWSKLAGTHGNVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSR 700 (752)
Q Consensus 624 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 700 (752)
|+++..... .......||+.|+|||++. +..++.++|||||||++|+|++|+.||.... ........+....
T Consensus 162 g~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~~~~~~~~~~ 236 (322)
T 2ycf_A 162 GHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR----TQVSLKDQITSGK 236 (322)
T ss_dssp TTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTT----CSSCHHHHHHHTC
T ss_pred ccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc----hHHHHHHHHHhCc
Confidence 999876432 1223457999999999864 5668999999999999999999999985211 1122233333344
Q ss_pred CCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 701 LPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 701 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
...........+.++.+++.+||+.||++|||++|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 237 YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 433322234456789999999999999999999999864
No 234
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2.2e-36 Score=323.53 Aligned_cols=236 Identities=22% Similarity=0.311 Sum_probs=185.1
Q ss_pred hhcccccceeeccCCceEEEEEEeC-CC-----cEEEEEccCCCCCC--------------------------CccccCC
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVP-SG-----EIFAVKKFHSPLPD--------------------------NFCSHPR 546 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~-----~~vavK~~~~~~~~--------------------------~~~~~~~ 546 (752)
..++|++.+.||+|+||.||+|+.. ++ ..||+|.++..... +++.+.+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 3578999999999999999999853 22 47999988654211 4455677
Q ss_pred ceEEEEEeccCCChHHHhccCcc-----------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCC
Q 041438 547 QSFIVYEYLESGSLDKILNNDAS-----------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLG 615 (752)
Q Consensus 547 ~~~lV~E~~~~g~L~~~l~~~~~-----------~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~ 615 (752)
..++||||+++|+|.+++..... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCC
Confidence 89999999999999999975421 23478899999999999999999999 99999999999999999
Q ss_pred CceEEeecccceeccCCCCC--cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccc
Q 041438 616 YEAHVSDFRIAKFLNLDSSN--WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNM 692 (752)
Q Consensus 616 ~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~ 692 (752)
+.+||+|||+++........ .....+|+.|+|||++.+..++.++|||||||++|||+| |..||... .....
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~-----~~~~~ 275 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI-----LVNSK 275 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC-----CSSHH
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCccc-----chhHH
Confidence 99999999999876543322 123457889999999999899999999999999999998 99998521 11112
Q ss_pred hHhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 693 NIEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
...........+. ....+..+.+++.+||+.||++|||++|++++|+++.
T Consensus 276 ~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 276 FYKLVKDGYQMAQ--PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp HHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCC--CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 2222222221111 1223567889999999999999999999999998864
No 235
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=324.45 Aligned_cols=237 Identities=22% Similarity=0.305 Sum_probs=176.6
Q ss_pred hHHHHHHhhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC------------------------Ccccc--
Q 041438 492 VYEEIIRATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD------------------------NFCSH-- 544 (752)
Q Consensus 492 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------------------------~~~~~-- 544 (752)
.++++....++|++.+.||+|+||.||+|+. .+++.||||++...... +++..
T Consensus 15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 94 (326)
T 2x7f_A 15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 94 (326)
T ss_dssp -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred cchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence 3344455788999999999999999999995 57999999987543221 12222
Q ss_pred ----CCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEE
Q 041438 545 ----PRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHV 620 (752)
Q Consensus 545 ----~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl 620 (752)
....++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl 170 (326)
T 2x7f_A 95 PPGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKL 170 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEE
T ss_pred CccccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEE
Confidence 467899999999999999997643 24588999999999999999999999 9999999999999999999999
Q ss_pred eecccceeccCCCCCcccccCCCCccCccccc-----cCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHh
Q 041438 621 SDFRIAKFLNLDSSNWSKLAGTHGNVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIE 695 (752)
Q Consensus 621 ~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~ 695 (752)
+|||++..............||+.|+|||++. +..++.++|||||||++|+|++|+.||.... .......
T Consensus 171 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~ 245 (326)
T 2x7f_A 171 VDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH-----PMRALFL 245 (326)
T ss_dssp CCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHH
T ss_pred eeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHH
Confidence 99999987654333334457999999999987 5668999999999999999999999985211 1111112
Q ss_pred hhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 696 ILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
+.....+.. .....+..+.+++.+||+.||++||+++|+++|
T Consensus 246 ~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 246 IPRNPAPRL--KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHHSCCCCC--SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhcCccccC--CccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 222111111 112345678899999999999999999999975
No 236
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4.4e-36 Score=322.74 Aligned_cols=226 Identities=25% Similarity=0.322 Sum_probs=178.9
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC---------------------------CccccCCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD---------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------------------------~~~~~~~~~~lV 551 (752)
.+.|++.+.||+|+||.||+|+. .+++.||||++...... +++...+..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 45699999999999999999994 68999999988643221 345567889999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
|||+.+ ++.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 133 ~e~~~g-~l~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 133 MEYCLG-SASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EECCSE-EHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EecCCC-CHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 999984 8888875432 3488999999999999999999999 999999999999999999999999999987543
Q ss_pred CCCCcccccCCCCccCccccc---cCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhh
Q 041438 632 DSSNWSKLAGTHGNVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDV 708 (752)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (752)
. ....||+.|+|||++. +..++.++|||||||++|||++|+.||.... .......+.....+.. ..
T Consensus 207 ~----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~-----~~~~~~~~~~~~~~~~--~~ 275 (348)
T 1u5q_A 207 A----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYHIAQNESPAL--QS 275 (348)
T ss_dssp B----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCCCCC--CC
T ss_pred C----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHhcCCCCC--CC
Confidence 2 3357999999999874 5678999999999999999999999985211 1111222222222211 11
Q ss_pred HHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhh
Q 041438 709 QNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQ 742 (752)
Q Consensus 709 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 742 (752)
...+..+.+++.+||+.||++|||++|+++|.--
T Consensus 276 ~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~ 309 (348)
T 1u5q_A 276 GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309 (348)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHH
T ss_pred CCCCHHHHHHHHHHcccChhhCcCHHHHhhChhh
Confidence 2345678899999999999999999999987543
No 237
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.1e-36 Score=315.95 Aligned_cols=231 Identities=23% Similarity=0.339 Sum_probs=181.8
Q ss_pred Hhhcccccce-eeccCCceEEEEEEe---CCCcEEEEEccCCCCCC--------------------------CccccCCc
Q 041438 498 RATNDFDAKH-CIGKGGHGSVYIARV---PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQ 547 (752)
Q Consensus 498 ~~~~~y~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~--------------------------~~~~~~~~ 547 (752)
...++|++.+ .||+|+||.||+|.. .+++.||||+++..... +++ ..+.
T Consensus 13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~ 91 (291)
T 1xbb_A 13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAES 91 (291)
T ss_dssp CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSS
T ss_pred ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCC
Confidence 3457888888 999999999999963 45789999998754321 223 4567
Q ss_pred eEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccce
Q 041438 548 SFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAK 627 (752)
Q Consensus 548 ~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~ 627 (752)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 92 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 92 WMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp EEEEEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred cEEEEEeCCCCCHHHHHHhCc---CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 899999999999999997643 488899999999999999999999 99999999999999999999999999998
Q ss_pred eccCCCCCc---ccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhccC-CC
Q 041438 628 FLNLDSSNW---SKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDSR-LP 702 (752)
Q Consensus 628 ~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~-~~ 702 (752)
......... ....+++.|+|||++.+..++.++|||||||++|||++ |+.||... ........+.... ..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-----~~~~~~~~~~~~~~~~ 240 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM-----KGSEVTAMLEKGERMG 240 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC-----CHHHHHHHHHTTCCCC
T ss_pred eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHHHcCCCCC
Confidence 765433211 22356788999999988889999999999999999999 99998521 1111222222221 12
Q ss_pred CCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 703 YPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 703 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
.+ ...++.+.+++.+||+.||++||+++|+++.|+++.
T Consensus 241 ~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 241 CP----AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp CC----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 22 345567899999999999999999999999999875
No 238
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=4.2e-36 Score=318.99 Aligned_cols=240 Identities=19% Similarity=0.311 Sum_probs=182.4
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC------------------------Cccc----cCCceE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD------------------------NFCS----HPRQSF 549 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------------------------~~~~----~~~~~~ 549 (752)
..++|++.+.||+|+||.||+|+. .+++.||||++...... +++. .....+
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 357899999999999999999995 68999999987432111 2222 234778
Q ss_pred EEEEeccCCChHHHhccCc-cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeeccccee
Q 041438 550 IVYEYLESGSLDKILNNDA-SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKF 628 (752)
Q Consensus 550 lV~E~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~ 628 (752)
+||||+++|+|.+++.... ....+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.+..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 9999999999999987532 124589999999999999999999999 999999999999999999999999999876
Q ss_pred ccCCCCC---------cccccCCCCccCccccccCC---CCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhh
Q 041438 629 LNLDSSN---------WSKLAGTHGNVAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEI 696 (752)
Q Consensus 629 ~~~~~~~---------~~~~~gt~~y~aPE~~~~~~---~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~ 696 (752)
....... .....||+.|+|||++.+.. +++++|||||||++|||++|+.||........ . ....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~-~~~~ 259 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD---S-VALA 259 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS---C-HHHH
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc---h-hhHH
Confidence 5321111 11235799999999987654 68999999999999999999999864322111 1 1111
Q ss_pred hccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcCC
Q 041438 697 LDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYNP 747 (752)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 747 (752)
.......+. ....+.++.+++.+||+.||++|||++|++++|+++...+
T Consensus 260 ~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 260 VQNQLSIPQ--SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp HHCC--CCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred hhccCCCCc--cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 112222221 1334567899999999999999999999999999986544
No 239
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.6e-36 Score=312.81 Aligned_cols=224 Identities=23% Similarity=0.348 Sum_probs=173.7
Q ss_pred hcccccceeeccCCceEEEEEEeC-CCcEEEEEccCCCCC---C------------------------CccccCCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSPLP---D------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~------------------------~~~~~~~~~~lV 551 (752)
.++|++.+.||+|+||.||+|+.. +|+.||||++..... . +++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 478999999999999999999964 799999998743210 0 445567889999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
|||+++++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 90 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred EeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 99999999999997543 478899999999999999999999 999999999999999999999999999987653
Q ss_pred CCCCcccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHH
Q 041438 632 DSSNWSKLAGTHGNVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQN 710 (752)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (752)
.. ......|++.|+|||.+.+..+ +.++||||||+++|+|++|+.||.. .........+.......+ ..
T Consensus 164 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~-----~~~~~~~~~~~~~~~~~~----~~ 233 (276)
T 2h6d_A 164 GE-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD-----EHVPTLFKKIRGGVFYIP----EY 233 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHCCCCCC----TT
T ss_pred Cc-ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCC-----CcHHHHHHHhhcCcccCc----hh
Confidence 22 2334578999999999887765 6899999999999999999999852 111222233333333333 22
Q ss_pred HHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 711 KFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 711 ~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.+..+.+++.+||+.||++|||++|+++|
T Consensus 234 ~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 234 LNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 34568899999999999999999999986
No 240
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4.2e-36 Score=320.53 Aligned_cols=236 Identities=24% Similarity=0.317 Sum_probs=181.5
Q ss_pred hcccccceeeccCCceEEEEEEe------CCCcEEEEEccCCCCCC-------------------------CccccCCce
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV------PSGEIFAVKKFHSPLPD-------------------------NFCSHPRQS 548 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~ 548 (752)
.++|++.+.||+|+||.||+|+. .+++.||||++...... +++......
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 57899999999999999999983 35789999998643221 345566788
Q ss_pred EEEEEeccCCChHHHhccCcc----ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCC---CCceEEe
Q 041438 549 FIVYEYLESGSLDKILNNDAS----AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDL---GYEAHVS 621 (752)
Q Consensus 549 ~lV~E~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~---~~~~kl~ 621 (752)
|+||||+++++|.+++..... ...+++..++.++.|++.||.|||+. +|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999986532 13488999999999999999999999 9999999999999984 4469999
Q ss_pred ecccceeccCCCC--CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhc
Q 041438 622 DFRIAKFLNLDSS--NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILD 698 (752)
Q Consensus 622 DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 698 (752)
|||++........ ......||+.|+|||++.+..++.++|||||||++|||+| |+.||... ........+..
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-----~~~~~~~~~~~ 260 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SNQEVLEFVTS 260 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----CHHHHHHHHHT
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc-----CHHHHHHHHhc
Confidence 9999986543221 1223467899999999998899999999999999999998 99998521 11122222222
Q ss_pred cCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcC
Q 041438 699 SRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYN 746 (752)
Q Consensus 699 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 746 (752)
....... ...+..+.+++.+||+.||++||+++|++++++.+...
T Consensus 261 ~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 261 GGRMDPP---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp TCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCCCC---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 2211111 23456788999999999999999999999999987543
No 241
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=4.6e-36 Score=328.36 Aligned_cols=236 Identities=19% Similarity=0.190 Sum_probs=171.8
Q ss_pred hcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC--------------------Ccc------ccCCceEEEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD--------------------NFC------SHPRQSFIVYE 553 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------~~~------~~~~~~~lV~E 553 (752)
..+|++.+.||+|+||.||+|+...+..||+|++...... +++ ......++|||
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e 118 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLE 118 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEee
Confidence 4579999999999999999999877777999987543221 122 12223789999
Q ss_pred eccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeC-CCCceEEeecccceeccCC
Q 041438 554 YLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLD-LGYEAHVSDFRIAKFLNLD 632 (752)
Q Consensus 554 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~-~~~~~kl~DfG~a~~~~~~ 632 (752)
|++++.+............+++..++.++.||++||+|||+. ||+||||||+||+++ .++.+||+|||+|+.....
T Consensus 119 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~ 195 (394)
T 4e7w_A 119 YVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG 195 (394)
T ss_dssp CCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred ccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence 998844333332222234588999999999999999999999 999999999999999 7899999999999876533
Q ss_pred CCCcccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHhCCCCcchhhccccc----------cccchH----hhh
Q 041438 633 SSNWSKLAGTHGNVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSS----------SSNMNI----EIL 697 (752)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~----------~~~~~~----~~~ 697 (752)
. ......||+.|+|||++.+. .++.++||||+||++|||++|+.||......... ..+... ...
T Consensus 196 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~ 274 (394)
T 4e7w_A 196 E-PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYM 274 (394)
T ss_dssp C-CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGS
T ss_pred C-CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhh
Confidence 3 23445789999999998765 4899999999999999999999999632110000 000000 000
Q ss_pred ccCCCC-CChh-----hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 698 DSRLPY-PSLD-----VQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 698 ~~~~~~-~~~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
....+. .... ....++++.+++.+||+.||++|||+.|+++|
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 275 EHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp SSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 011110 0000 01245679999999999999999999999986
No 242
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.7e-35 Score=321.41 Aligned_cols=231 Identities=19% Similarity=0.216 Sum_probs=167.6
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------Ccccc------CC
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSH------PR 546 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~------~~ 546 (752)
.++|++.+.||+|+||.||+|+. .+++.||||++...... +++.. ..
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 47899999999999999999984 57899999998653221 12222 23
Q ss_pred ceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccc
Q 041438 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIA 626 (752)
Q Consensus 547 ~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a 626 (752)
..|+||||+++ +|.+.+.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 174 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 174 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred ceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecc
Confidence 68999999986 78888752 378899999999999999999999 9999999999999999999999999999
Q ss_pred eeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccc----------c-------
Q 041438 627 KFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSS----------S------- 689 (752)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~----------~------- 689 (752)
+..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......... .
T Consensus 175 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 175 RTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTS
T ss_pred cccccc-cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 876432 2233458999999999999999999999999999999999999999532110000 0
Q ss_pred ccchHhhhccCC----------------CCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 041438 690 SNMNIEILDSRL----------------PYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQS 740 (752)
Q Consensus 690 ~~~~~~~~~~~~----------------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 740 (752)
............ +.........+.++.+++.+||+.||++|||++|+++|-
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 000000000111 111111223467899999999999999999999999864
No 243
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6.5e-36 Score=334.30 Aligned_cols=233 Identities=19% Similarity=0.230 Sum_probs=161.0
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------Ccc-----ccCCc
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFC-----SHPRQ 547 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~-----~~~~~ 547 (752)
.++|++.+.||+|+||.||+|+. .+++.||||++...... +++ .....
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 47899999999999999999984 57999999988654322 122 23356
Q ss_pred eEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccce
Q 041438 548 SFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAK 627 (752)
Q Consensus 548 ~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~ 627 (752)
.|+||||+. ++|.+++.... .+++..++.+++||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTPV---YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLAR 204 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEEeccc-cchhhhcccCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccch
Confidence 899999986 59999987543 488999999999999999999999 99999999999999999999999999998
Q ss_pred eccCCCC---------------------------CcccccCCCCccCcccc-ccCCCCCccchhhHHHHHHHHHh-----
Q 041438 628 FLNLDSS---------------------------NWSKLAGTHGNVAPELA-YTMKVTEKCDVYSFGVLALEVIK----- 674 (752)
Q Consensus 628 ~~~~~~~---------------------------~~~~~~gt~~y~aPE~~-~~~~~~~ksDIwSlGvil~ellt----- 674 (752)
....... .....+||+.|+|||++ .+..++.++|||||||++|||++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~ 284 (458)
T 3rp9_A 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKEN 284 (458)
T ss_dssp CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTT
T ss_pred hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccc
Confidence 7643211 12345789999999976 46679999999999999999999
Q ss_pred ------CCCCcchhhcccccc---------------ccch-----------------------Hhhhcc---CCCCC-Ch
Q 041438 675 ------GKHPRDFLFEMSSSS---------------SNMN-----------------------IEILDS---RLPYP-SL 706 (752)
Q Consensus 675 ------g~~pf~~~~~~~~~~---------------~~~~-----------------------~~~~~~---~~~~~-~~ 706 (752)
|+++|.......... .... ...... ..... ..
T Consensus 285 ~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (458)
T 3rp9_A 285 VAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAE 364 (458)
T ss_dssp CSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGG
T ss_pred ccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHH
Confidence 555553211000000 0000 000000 00000 00
Q ss_pred hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 707 DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 707 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.....++++.+|+.+||..||++|||++|+++|
T Consensus 365 ~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 365 RFPASSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp GSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HCCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 112335678999999999999999999999986
No 244
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.7e-35 Score=327.92 Aligned_cols=173 Identities=24% Similarity=0.361 Sum_probs=141.9
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccC-----Cc
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHP-----RQ 547 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~-----~~ 547 (752)
.++|++.+.||+|+||.||+|+. .+++.||||+++..... +++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 57899999999999999999994 57899999998754322 122222 56
Q ss_pred eEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccce
Q 041438 548 SFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAK 627 (752)
Q Consensus 548 ~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~ 627 (752)
.|+||||+.+ +|.+++.... .+++..++.+++||++||+|||+. +|+||||||+|||++.++.+||+|||+|+
T Consensus 105 ~~lv~e~~~~-~L~~~~~~~~---~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~ 177 (432)
T 3n9x_A 105 LYIVLEIADS-DLKKLFKTPI---FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLAR 177 (432)
T ss_dssp EEEEEECCSE-EHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEecCCc-CHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence 8999999975 9999997543 488999999999999999999999 99999999999999999999999999999
Q ss_pred eccCCCC----------------------CcccccCCCCccCcccc-ccCCCCCccchhhHHHHHHHHHhCCCCc
Q 041438 628 FLNLDSS----------------------NWSKLAGTHGNVAPELA-YTMKVTEKCDVYSFGVLALEVIKGKHPR 679 (752)
Q Consensus 628 ~~~~~~~----------------------~~~~~~gt~~y~aPE~~-~~~~~~~ksDIwSlGvil~elltg~~pf 679 (752)
....... .....+||+.|+|||++ .+..++.++||||+||++|||++|..||
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp EC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 7654321 12456899999999986 4566999999999999999999876665
No 245
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.9e-36 Score=317.27 Aligned_cols=231 Identities=23% Similarity=0.328 Sum_probs=169.6
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccCCceEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV 551 (752)
..++|++.+.||+|+||.||+|+. .+|+.||||+++..... +++.+.+..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 357899999999999999999995 68999999988654221 345567889999
Q ss_pred EEeccCCChHHHhccC-ccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 552 YEYLESGSLDKILNND-ASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
|||+++ +|.+++... .....+++..++.++.|++.||+|||+++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 999985 888877642 12345899999999999999999999853 89999999999999999999999999998765
Q ss_pred CCCCCcccccCCCCccCcccc----ccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCCh
Q 041438 631 LDSSNWSKLAGTHGNVAPELA----YTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSL 706 (752)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 706 (752)
... ......||+.|+|||++ .+..++.++||||+||++|||++|+.||+.. ...............+..
T Consensus 162 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~----~~~~~~~~~~~~~~~~~~-- 234 (290)
T 3fme_A 162 DDV-AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW----GTPFQQLKQVVEEPSPQL-- 234 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCC----SCHHHHHHHHHHSCCCCC--
T ss_pred ccc-cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCcccc----CchHHHHHHHhccCCCCc--
Confidence 332 22334799999999996 4567899999999999999999999998521 111112222222222211
Q ss_pred hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 707 DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 707 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.....++++.+++.+||+.||++|||++|+++|
T Consensus 235 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 235 PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 113455678999999999999999999999974
No 246
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6e-36 Score=326.57 Aligned_cols=232 Identities=21% Similarity=0.235 Sum_probs=173.3
Q ss_pred HhhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------Ccc--------------
Q 041438 498 RATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------NFC-------------- 542 (752)
Q Consensus 498 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------~~~-------------- 542 (752)
...++|++.+.||+|+||.||+|+. .+|+.||||++...... +++
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~ 83 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPP 83 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC-----------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCcccccccccc
Confidence 4578899999999999999999984 68999999987543221 111
Q ss_pred ------------------------ccCCceEEEEEeccCCChHHHhccC-ccccccCHHHHHHHHHHHHHHHHHHHhCCC
Q 041438 543 ------------------------SHPRQSFIVYEYLESGSLDKILNND-ASAKELGWTQRLNVIKGVADALFYLHNNCF 597 (752)
Q Consensus 543 ------------------------~~~~~~~lV~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~ 597 (752)
......++||||+++ +|.+.+... .....+++..++.++.||++||+|||+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-- 160 (383)
T 3eb0_A 84 DDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL-- 160 (383)
T ss_dssp --------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT--
T ss_pred cccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 223347899999985 888777642 1224588999999999999999999999
Q ss_pred CCeeecCCCCCCEEeC-CCCceEEeecccceeccCCCCCcccccCCCCccCccccccCC-CCCccchhhHHHHHHHHHhC
Q 041438 598 PPIVHWDISSKNVLLD-LGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMK-VTEKCDVYSFGVLALEVIKG 675 (752)
Q Consensus 598 ~~ivH~DlKp~NIll~-~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDIwSlGvil~elltg 675 (752)
||+||||||+||+++ .++.+||+|||+|+...... ......||+.|+|||++.+.. ++.++||||+||++|||++|
T Consensus 161 -gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g 238 (383)
T 3eb0_A 161 -GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILG 238 (383)
T ss_dssp -TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS
T ss_pred -cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhC
Confidence 999999999999997 68899999999999765333 334457899999999887754 89999999999999999999
Q ss_pred CCCcchhhccccccccchHhhhc--------------cC---CCCCC---hh-----hHHHHHHHHHHHHhccCcCCCCC
Q 041438 676 KHPRDFLFEMSSSSSNMNIEILD--------------SR---LPYPS---LD-----VQNKFMSIMQVAFSCLDQNPVSR 730 (752)
Q Consensus 676 ~~pf~~~~~~~~~~~~~~~~~~~--------------~~---~~~~~---~~-----~~~~~~~l~~li~~cl~~dP~~R 730 (752)
+.||...... +....+.. .. ..++. .. ....+.++.+++.+||+.||++|
T Consensus 239 ~~pf~~~~~~-----~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (383)
T 3eb0_A 239 KPLFSGETSI-----DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLR 313 (383)
T ss_dssp SCSSCCSSHH-----HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGS
T ss_pred CCCCCCCChH-----HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhC
Confidence 9999632110 11111100 00 00000 00 11245568999999999999999
Q ss_pred CCHHHHHHH
Q 041438 731 PTMKRFEVQ 739 (752)
Q Consensus 731 ps~~evl~~ 739 (752)
||+.|+++|
T Consensus 314 ~t~~e~l~h 322 (383)
T 3eb0_A 314 INPYEAMAH 322 (383)
T ss_dssp CCHHHHHTS
T ss_pred CCHHHHhcC
Confidence 999999865
No 247
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=8.4e-36 Score=313.09 Aligned_cols=229 Identities=24% Similarity=0.283 Sum_probs=176.9
Q ss_pred cccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC------------------------CccccCCceEEEEEec
Q 041438 501 NDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD------------------------NFCSHPRQSFIVYEYL 555 (752)
Q Consensus 501 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------------------------~~~~~~~~~~lV~E~~ 555 (752)
++|.....||+|+||.||+|+. .+++.||||.+...... +++...+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 3455566999999999999994 57889999987654321 3455667889999999
Q ss_pred cCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCC-CCceEEeecccceeccCCCC
Q 041438 556 ESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDL-GYEAHVSDFRIAKFLNLDSS 634 (752)
Q Consensus 556 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~-~~~~kl~DfG~a~~~~~~~~ 634 (752)
++++|.+++........+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||.+........
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 9999999998654444567889999999999999999999 9999999999999987 89999999999987654333
Q ss_pred CcccccCCCCccCccccccCC--CCCccchhhHHHHHHHHHhCCCCcchhhccccccccchH-hhhccCCCCCChhhHHH
Q 041438 635 NWSKLAGTHGNVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNI-EILDSRLPYPSLDVQNK 711 (752)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~--~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 711 (752)
......||+.|+|||++.+.. ++.++|||||||++|||++|+.||..... ....... .........+ ...
T Consensus 179 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~~~~~~~~~~~~~~~~----~~~ 251 (295)
T 2clq_A 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE---PQAAMFKVGMFKVHPEIP----ESM 251 (295)
T ss_dssp --CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS---HHHHHHHHHHHCCCCCCC----TTS
T ss_pred cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc---hhHHHHhhcccccccccc----ccC
Confidence 334557999999999987653 78999999999999999999999852111 0111111 1111112222 234
Q ss_pred HHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 712 FMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 712 ~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
+.++.+++.+||+.||++||+++|+++|
T Consensus 252 ~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 252 SAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp CHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 5678899999999999999999999865
No 248
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=7.4e-36 Score=314.24 Aligned_cols=230 Identities=20% Similarity=0.290 Sum_probs=177.4
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccCCceEEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIVY 552 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV~ 552 (752)
.++|++.+.||+|+||.||+|+. .+|+.||||+++..... +++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 36899999999999999999995 47999999988643211 3445667899999
Q ss_pred EeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCC
Q 041438 553 EYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLD 632 (752)
Q Consensus 553 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~ 632 (752)
||+.+ +|.+++..... ..+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.+......
T Consensus 82 e~~~~-~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 82 EFLHQ-DLKKFMDASAL-TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp ECCSE-EHHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred EcccC-CHHHHHHhhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 99984 99999876532 3478899999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCcccccCCCCccCccccccCC-CCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhc-------------
Q 041438 633 SSNWSKLAGTHGNVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILD------------- 698 (752)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~------------- 698 (752)
........||+.|+|||++.+.. ++.++|||||||++|||++|+.||...... .....+..
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 231 (299)
T 2r3i_A 157 VRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-----DQLFRIFRTLGTPDEVVWPGV 231 (299)
T ss_dssp SBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHHHHCCCCTTTSTTG
T ss_pred ccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH-----HHHHHHHHHhCCCchhhhhHh
Confidence 33344557899999999988765 799999999999999999999998632110 00000000
Q ss_pred -----cCCCCCC-------hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 699 -----SRLPYPS-------LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 699 -----~~~~~~~-------~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.....+. ......+.++.+++.+||+.||++|||++|+++|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp GGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000 0011234678899999999999999999999975
No 249
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-35 Score=310.26 Aligned_cols=231 Identities=23% Similarity=0.307 Sum_probs=177.5
Q ss_pred cccccceeeccCCceEEEEEEeC-CC---cEEEEEccCCCCCC-------------------------CccccCC-ceEE
Q 041438 501 NDFDAKHCIGKGGHGSVYIARVP-SG---EIFAVKKFHSPLPD-------------------------NFCSHPR-QSFI 550 (752)
Q Consensus 501 ~~y~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~-------------------------~~~~~~~-~~~l 550 (752)
-.|++.+.||+|+||.||+|+.. ++ ..||+|++...... +++...+ ..++
T Consensus 21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 35667799999999999999842 33 37999988653221 2333333 3489
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
||||+.+|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 101 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRSPQ--RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp EECCCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EEecccCCCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 999999999999997643 3478899999999999999999999 99999999999999999999999999998654
Q ss_pred CCC----CCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccC-CCCCC
Q 041438 631 LDS----SNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSR-LPYPS 705 (752)
Q Consensus 631 ~~~----~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~ 705 (752)
... .......+++.|+|||.+.+..+++++|||||||++|+|++|..|+.. ..........+.... .+.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~- 250 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYR----HIDPFDLTHFLAQGRRLPQP- 250 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTT----TSCGGGHHHHHHTTCCCCCC-
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCc----cCCHHHHHHHhhcCCCCCCC-
Confidence 321 122334678899999999999999999999999999999996655421 111112222222222 1222
Q ss_pred hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 706 LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 706 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
...++.+.+++.+||+.||++|||++|+++.|+++.
T Consensus 251 ---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 286 (298)
T 3pls_A 251 ---EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV 286 (298)
T ss_dssp ---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---ccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 234567889999999999999999999999999875
No 250
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.2e-36 Score=321.55 Aligned_cols=232 Identities=19% Similarity=0.267 Sum_probs=165.4
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------------Ccc--------cc
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-------------------------NFC--------SH 544 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------~~~--------~~ 544 (752)
...+|++.+.||+|+||.||+|+. .+++.||||++...... +++ ..
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 346899999999999999999995 57899999987432111 111 33
Q ss_pred CCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCC--eeecCCCCCCEEeCCCCceEEee
Q 041438 545 PRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP--IVHWDISSKNVLLDLGYEAHVSD 622 (752)
Q Consensus 545 ~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~--ivH~DlKp~NIll~~~~~~kl~D 622 (752)
....++||||+. |+|.+++........+++.+++.++.||+.||+|||+. + |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEec
Confidence 445799999997 59999887643344589999999999999999999999 8 99999999999999999999999
Q ss_pred cccceeccCCCCC------------cccccCCCCccCcccc---ccCCCCCccchhhHHHHHHHHHhCCCCcchhhcccc
Q 041438 623 FRIAKFLNLDSSN------------WSKLAGTHGNVAPELA---YTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS 687 (752)
Q Consensus 623 fG~a~~~~~~~~~------------~~~~~gt~~y~aPE~~---~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~ 687 (752)
||+++........ .....||+.|+|||++ .+..+++++|||||||++|||++|+.||.....
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--- 258 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK--- 258 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH---
Confidence 9999876533211 1134689999999988 566789999999999999999999999852211
Q ss_pred ccccchHhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 688 SSSNMNIEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
..+.......+. ....+..+.+++.+||+.||++|||++|++++|+++..
T Consensus 259 ------~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 259 ------LRIVNGKYSIPP--HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp -------------CCCCT--TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------HHhhcCcccCCc--ccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 111111222111 12223457789999999999999999999999998864
No 251
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=2.8e-34 Score=306.80 Aligned_cols=281 Identities=21% Similarity=0.268 Sum_probs=224.6
Q ss_pred CCCcccceeeCCC----------CCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeec
Q 041438 71 SLCTWSGIHCNHA----------GRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDF 140 (752)
Q Consensus 71 ~~c~w~gv~C~~~----------~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 140 (752)
..|.|..+.|... ..+..++++++.+.+ +++..|..+++|++|+|++|+++++.|..|+++++|++|+|
T Consensus 29 c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 29 CQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITE-IKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp CEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCC-BCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCE-eChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 4589999999632 256678999988876 44557999999999999999999999999999999999999
Q ss_pred CCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCC--cCCcCccCCCcceEEeecccccc
Q 041438 141 LTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGG--SIPRSLSNFTNLVFLYLYNNSFS 218 (752)
Q Consensus 141 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~ 218 (752)
++|+++. +|..+. ++|++|++++|.+++..+..|.++++|++|+|++|+++. ..+..|.++++|++|++++|+++
T Consensus 108 s~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 108 SKNQLKE-LPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp CSSCCSB-CCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCCcCCc-cChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 9999994 555544 799999999999998888889999999999999999964 77889999999999999999987
Q ss_pred ccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCcc
Q 041438 219 GSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQ 298 (752)
Q Consensus 219 ~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 298 (752)
. +|..+ .++|++|++++|++++..|..+..+++|++|+|++|.+++..+..
T Consensus 185 ~-l~~~~----------------------------~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 235 (330)
T 1xku_A 185 T-IPQGL----------------------------PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGS 235 (330)
T ss_dssp S-CCSSC----------------------------CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTT
T ss_pred c-CCccc----------------------------cccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhh
Confidence 4 33221 146778888888888887888888888888888888888877778
Q ss_pred ccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhccc------ccccEEEcCCCcCcc--ccchh
Q 041438 299 LGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSL------VKLYYLNLSHNKLSQ--QIPIE 370 (752)
Q Consensus 299 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l------~~L~~L~Ls~N~l~~--~~p~~ 370 (752)
+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|+|+++.+..|... ..|+.|++++|.+.. ..|..
T Consensus 236 ~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~ 314 (330)
T 1xku_A 236 LANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPST 314 (330)
T ss_dssp GGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGG
T ss_pred ccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccc
Confidence 888888888888888888 567778888888888888888888777766543 556666666666642 44455
Q ss_pred ccccccCCeeecCCc
Q 041438 371 LDNLIHLSELDLSHN 385 (752)
Q Consensus 371 ~~~l~~L~~L~Ls~N 385 (752)
|..+.+++.++|++|
T Consensus 315 f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 315 FRCVYVRAAVQLGNY 329 (330)
T ss_dssp GTTCCCGGGEEC---
T ss_pred cccccceeEEEeccc
Confidence 555555555555555
No 252
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.5e-35 Score=308.92 Aligned_cols=224 Identities=19% Similarity=0.238 Sum_probs=174.1
Q ss_pred cccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------Ccc----ccCCceE
Q 041438 501 NDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFC----SHPRQSF 549 (752)
Q Consensus 501 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~----~~~~~~~ 549 (752)
..|++.+.||+|+||.||+|+. .++..||+|++...... +++ ......+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 4578889999999999999985 57889999987543221 111 1245689
Q ss_pred EEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCC--eeecCCCCCCEEeC-CCCceEEeecccc
Q 041438 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP--IVHWDISSKNVLLD-LGYEAHVSDFRIA 626 (752)
Q Consensus 550 lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~--ivH~DlKp~NIll~-~~~~~kl~DfG~a 626 (752)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||+. + |+||||||+||+++ +++.+||+|||++
T Consensus 106 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEEEecCCCCHHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 9999999999999997543 478899999999999999999999 8 99999999999997 7889999999999
Q ss_pred eeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCCh
Q 041438 627 KFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSL 706 (752)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 706 (752)
..... .......||+.|+|||++. ..++.++||||+||++|+|++|+.||... .........+..... +..
T Consensus 180 ~~~~~--~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~----~~~~~~~~~~~~~~~--~~~ 250 (290)
T 1t4h_A 180 TLKRA--SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSEC----QNAAQIYRRVTSGVK--PAS 250 (290)
T ss_dssp GGCCT--TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTC----SSHHHHHHHHTTTCC--CGG
T ss_pred ccccc--cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCc----CcHHHHHHHHhccCC--ccc
Confidence 75432 2334457999999999876 45899999999999999999999998521 111111222222111 111
Q ss_pred hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 707 DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 707 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.....++++.+++.+||+.||++|||++|+++|
T Consensus 251 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 251 FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 123344678999999999999999999999875
No 253
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=9.1e-36 Score=322.34 Aligned_cols=236 Identities=18% Similarity=0.156 Sum_probs=165.7
Q ss_pred HHHHHhhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-----------------------Ccccc-----
Q 041438 494 EEIIRATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-----------------------NFCSH----- 544 (752)
Q Consensus 494 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----------------------~~~~~----- 544 (752)
++.....++|++.+.||+|+||.||+|+. .+|+.||||++...... +++..
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 45567789999999999999999999995 57899999987543221 11211
Q ss_pred --CCceEEEEEeccCCChHHHhcc-CccccccCHHHHHHHHHHHHHHHHHHH--hCCCCCeeecCCCCCCEEeCC-CCce
Q 041438 545 --PRQSFIVYEYLESGSLDKILNN-DASAKELGWTQRLNVIKGVADALFYLH--NNCFPPIVHWDISSKNVLLDL-GYEA 618 (752)
Q Consensus 545 --~~~~~lV~E~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH--~~~~~~ivH~DlKp~NIll~~-~~~~ 618 (752)
....++||||+++ ++.+.+.. ......+++..+..++.|++.||.||| +. +|+||||||+||+++. ++.+
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcE
Confidence 1237899999987 55544432 122345788999999999999999999 88 9999999999999996 8999
Q ss_pred EEeecccceeccCCCCCcccccCCCCccCccccccCC-CCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhh
Q 041438 619 HVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEIL 697 (752)
Q Consensus 619 kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 697 (752)
||+|||+++...... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||..... ......+.
T Consensus 172 kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-----~~~~~~~~ 245 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS-----AGQLHEIV 245 (360)
T ss_dssp EECCCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHH
T ss_pred EEeeCCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh-----HHHHHHHH
Confidence 999999998765433 233457899999999987654 89999999999999999999999853211 11111110
Q ss_pred c--------------cCCC------CCChh--------hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 698 D--------------SRLP------YPSLD--------VQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 698 ~--------------~~~~------~~~~~--------~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
. .... ..... ....++++.+++.+||+.||++|||++|+++|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 246 RVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0 0000 00000 01145679999999999999999999999976
No 254
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.1e-35 Score=314.14 Aligned_cols=230 Identities=17% Similarity=0.194 Sum_probs=175.6
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC----------------------Ccccc--CCceEEEEEe
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD----------------------NFCSH--PRQSFIVYEY 554 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----------------------~~~~~--~~~~~lV~E~ 554 (752)
.++|++.+.||+|+||.||+|+. .+++.||||+++..... +++.. ....++||||
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~ 114 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 114 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEec
Confidence 57899999999999999999984 67999999998643211 22333 5668999999
Q ss_pred ccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCC-ceEEeecccceeccCCC
Q 041438 555 LESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGY-EAHVSDFRIAKFLNLDS 633 (752)
Q Consensus 555 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~-~~kl~DfG~a~~~~~~~ 633 (752)
+.+++|.+++. .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||+++......
T Consensus 115 ~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 115 VNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp CCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred cCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 99999999884 277899999999999999999999 999999999999999776 89999999998765433
Q ss_pred CCcccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCcchhhcccc---------ccccchHhhhccCCCC
Q 041438 634 SNWSKLAGTHGNVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS---------SSSNMNIEILDSRLPY 703 (752)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~---------~~~~~~~~~~~~~~~~ 703 (752)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ ........+.......
T Consensus 186 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 264 (330)
T 3nsz_A 186 -EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 264 (330)
T ss_dssp -CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCC
T ss_pred -ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccc
Confidence 3344589999999999877 6689999999999999999999999831110000 0000000000000000
Q ss_pred --------------------CChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 704 --------------------PSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 704 --------------------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
........++++.+++.+||+.||++|||++|+++|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 265 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000112246789999999999999999999999975
No 255
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.6e-36 Score=316.31 Aligned_cols=230 Identities=23% Similarity=0.325 Sum_probs=176.5
Q ss_pred hhcccccceeeccCCceEEEEEEeC-CCcEEEEEccCCCCCC------------------------CccccCCceEEEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSPLPD------------------------NFCSHPRQSFIVYE 553 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------------------------~~~~~~~~~~lV~E 553 (752)
..++|++.+.||+|+||.||+|+.. +++.||+|++...... +++...+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 4678999999999999999999964 6899999988654321 34556778999999
Q ss_pred eccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCC
Q 041438 554 YLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS 633 (752)
Q Consensus 554 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~ 633 (752)
|+++++|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (302)
T 2j7t_A 97 FCPGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL 171 (302)
T ss_dssp CCTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH
T ss_pred eCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccc
Confidence 999999999886532 3488999999999999999999999 99999999999999999999999999976432221
Q ss_pred CCcccccCCCCccCcccc-----ccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhh
Q 041438 634 SNWSKLAGTHGNVAPELA-----YTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDV 708 (752)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~-----~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (752)
.......||+.|+|||++ .+..++.++|||||||++|+|++|+.||.... .......+.....+.. ...
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~-~~~ 245 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN-----PMRVLLKIAKSDPPTL-LTP 245 (302)
T ss_dssp HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCCCCC-SSG
T ss_pred cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC-----HHHHHHHHhccCCccc-CCc
Confidence 222335789999999987 36678999999999999999999999985221 1111222222222211 112
Q ss_pred HHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 709 QNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 709 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
...+..+.+++.+||+.||++|||++|+++|
T Consensus 246 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 246 SKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp GGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred cccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 3456678999999999999999999999875
No 256
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=5.2e-36 Score=321.65 Aligned_cols=231 Identities=22% Similarity=0.323 Sum_probs=180.4
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccCCceEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV 551 (752)
..++|++.+.||+|+||.||+|+. .+|+.||||+++..... +++...+..|+|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 467899999999999999999995 68999999998654322 345566789999
Q ss_pred EEeccCCChHHHhccCc-cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 552 YEYLESGSLDKILNNDA-SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
|||+++ +|.+++.... ....+++..++.++.||+.||+|||++. ||+||||||+||+++.++.+||+|||+++...
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 999986 9988886421 2245899999999999999999999742 89999999999999999999999999998764
Q ss_pred CCCCCcccccCCCCccCccccc----cCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCCh
Q 041438 631 LDSSNWSKLAGTHGNVAPELAY----TMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSL 706 (752)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~----~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 706 (752)
.. .......||+.|+|||++. +..++.++|||||||++|||+||+.||... .........+.....+..
T Consensus 206 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~----~~~~~~~~~~~~~~~~~~-- 278 (340)
T 3an0_A 206 DS-VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW----GTPFQQLKQVVEEPSPQL-- 278 (340)
T ss_dssp CH-HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCC----SCHHHHHHHHHHSCCCCC--
T ss_pred cc-cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccc----cchHHHHHHHhcCCCCCC--
Confidence 22 1122347999999999964 346899999999999999999999998521 111112222222222211
Q ss_pred hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 707 DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 707 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.....+.++.+++.+||+.||++|||++|+++|
T Consensus 279 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 279 PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 123456779999999999999999999999975
No 257
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.1e-35 Score=326.07 Aligned_cols=229 Identities=18% Similarity=0.224 Sum_probs=174.6
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------------------Cccc----
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-------------------------------NFCS---- 543 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------------~~~~---- 543 (752)
.++|++.++||+|+||.||+|+. .+++.||||+++..... +++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 47899999999999999999984 57899999998643110 1111
Q ss_pred cCCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCC-------
Q 041438 544 HPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGY------- 616 (752)
Q Consensus 544 ~~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~------- 616 (752)
.....++||||+. +++.+.+.... ...+++..++.++.||+.||+|||+++ ||+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 116 NGTHICMVFEVLG-HHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TEEEEEEEECCCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCceEEEEEeccC-ccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhh
Confidence 3457899999995 56666665432 234889999999999999999999964 899999999999998775
Q ss_pred ------------------------------------------ceEEeecccceeccCCCCCcccccCCCCccCccccccC
Q 041438 617 ------------------------------------------EAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTM 654 (752)
Q Consensus 617 ------------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 654 (752)
.+||+|||.++..... .....||+.|+|||++.+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~~~~~ 268 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEVLIGS 268 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHHHHTS
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChhhcCC
Confidence 7999999999876532 3345799999999999999
Q ss_pred CCCCccchhhHHHHHHHHHhCCCCcchhhccccccc-cchHhh-------------------------------------
Q 041438 655 KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSS-NMNIEI------------------------------------- 696 (752)
Q Consensus 655 ~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~-~~~~~~------------------------------------- 696 (752)
.++.++|||||||++|||+||+.||........... .....+
T Consensus 269 ~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (397)
T 1wak_A 269 GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPW 348 (397)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCC
T ss_pred CCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCc
Confidence 999999999999999999999999953211000000 000000
Q ss_pred -----hccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 697 -----LDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 697 -----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
....... ....+..+.+++.+||+.||++|||++|+++|
T Consensus 349 ~~~~~~~~~~~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 349 GLFEVLVEKYEW----SQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CHHHHHHHTSCC----CHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred chhHhhhhhccc----chhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0000011 24566789999999999999999999999875
No 258
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=8.9e-34 Score=315.45 Aligned_cols=307 Identities=28% Similarity=0.345 Sum_probs=149.5
Q ss_pred EEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeecc
Q 041438 86 VFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHIS 165 (752)
Q Consensus 86 v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 165 (752)
+..++++++++.+- +. -.++|++|++++|++++ +|.. +++|++|+|++|++++. |.. .++|++|+|+
T Consensus 73 l~~L~l~~~~l~~l-p~----~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~ 139 (454)
T 1jl5_A 73 AHELELNNLGLSSL-PE----LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVS 139 (454)
T ss_dssp CSEEECTTSCCSCC-CS----CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECC
T ss_pred CCEEEecCCccccC-CC----CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECc
Confidence 45566666655541 11 12566666666666665 3432 25566666666666542 211 1456666666
Q ss_pred CcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCc
Q 041438 166 RNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAI 245 (752)
Q Consensus 166 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 245 (752)
+|++++ +| .|+++++|++|++++|++++ +|..+ .+|++|+|++|++++ +| .++++++|+.|++++|++++.
T Consensus 140 ~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l- 210 (454)
T 1jl5_A 140 NNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKL- 210 (454)
T ss_dssp SSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSC-
T ss_pred CCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcC-
Confidence 666664 44 46666666666666666664 33332 356666666666664 33 456666666666666666542
Q ss_pred CCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCC
Q 041438 246 PLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGS 325 (752)
Q Consensus 246 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 325 (752)
|. ..++|++|++++|+++ .+| .+..+++|++|++++|++++ +|.. +++|+.|++++|++++ +|..
T Consensus 211 ~~-----~~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~--- 275 (454)
T 1jl5_A 211 PD-----LPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL--- 275 (454)
T ss_dssp CC-----CCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---
T ss_pred CC-----CcCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---
Confidence 21 1135666666666665 344 35556666666666666654 2322 2455555666665554 2322
Q ss_pred Ccccceeeccccccccccchh---------------hccc-ccccEEEcCCCcCccccchhccccccCCeeecCCccCCC
Q 041438 326 LINLEYLDLSANHLSNFVLES---------------LGSL-VKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGE 389 (752)
Q Consensus 326 l~~L~~L~Ls~N~l~~~~~~~---------------~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 389 (752)
.++|++|++++|+++++.... +..+ ++|++|++++|++++ +|.. +++|++|++++|++++
T Consensus 276 ~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~ 351 (454)
T 1jl5_A 276 PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE 351 (454)
T ss_dssp CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc
Confidence 245555555555555422100 0111 345555555555543 2322 3455555555555543
Q ss_pred CCCcccccccccceEEccCCcCCc--CCchhhhcc-------------CCCcEEEccCCcccC
Q 041438 390 KISSRICRMESLEKLNLSYNNLSG--LIPRCFEEL-------------HGLLHIDISYNKLEG 437 (752)
Q Consensus 390 ~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l-------------~~L~~L~ls~N~l~~ 437 (752)
+|. .+++|++|++++|++++ .+|..+..+ ++|+.||+++|++++
T Consensus 352 -lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 352 -VPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLRE 410 (454)
T ss_dssp -CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC------------------------
T ss_pred -ccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCc
Confidence 222 24555555555555555 445555444 455555555555554
No 259
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.2e-35 Score=311.32 Aligned_cols=234 Identities=21% Similarity=0.245 Sum_probs=174.0
Q ss_pred hcccccceeeccCCceEEEEEEeC--CCc--EEEEEccCCCCCC---------------------------CccccCCce
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVP--SGE--IFAVKKFHSPLPD---------------------------NFCSHPRQS 548 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~---------------------------~~~~~~~~~ 548 (752)
.++|++.+.||+|+||.||+|+.. +++ .||||+++..... +++. ....
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPM 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEc-cCCc
Confidence 468999999999999999999842 333 6999998754211 2222 2448
Q ss_pred EEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeeccccee
Q 041438 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKF 628 (752)
Q Consensus 549 ~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~ 628 (752)
++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccc
Confidence 89999999999999997643 3488999999999999999999999 999999999999999999999999999988
Q ss_pred ccCCCCC---cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhccCCCCC
Q 041438 629 LNLDSSN---WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDSRLPYP 704 (752)
Q Consensus 629 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (752)
....... .....+|..|+|||++.+..++.++||||||+++|||++ |+.||... ........+.......+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-----~~~~~~~~~~~~~~~~~ 245 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-----NGSQILHKIDKEGERLP 245 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHHHTSCCCCC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC-----CHHHHHHHHHccCCCCC
Confidence 7543321 123467888999999998889999999999999999999 99998521 11222223322222222
Q ss_pred ChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcC
Q 041438 705 SLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYN 746 (752)
Q Consensus 705 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 746 (752)
. ....+.++.+++.+||+.||++|||+++++++|+++...
T Consensus 246 ~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 246 R--PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp C--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred C--CcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 1 134566789999999999999999999999999987543
No 260
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.3e-35 Score=318.20 Aligned_cols=230 Identities=19% Similarity=0.264 Sum_probs=174.2
Q ss_pred hcccccceeeccCCceEEEEEEeC-CC-cEEEEEccCCCCCC-----------------------------CccccCCce
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVP-SG-EIFAVKKFHSPLPD-----------------------------NFCSHPRQS 548 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~-----------------------------~~~~~~~~~ 548 (752)
.++|++.+.||+|+||.||+|+.. ++ +.||+|+++..... +++...+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 468999999999999999999853 44 78999998642110 234456788
Q ss_pred EEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEe----------------
Q 041438 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLL---------------- 612 (752)
Q Consensus 549 ~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll---------------- 612 (752)
++||||+ ++++.+++.... ...+++.+++.++.||+.||+|||+. +|+||||||+||++
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccccc
Confidence 9999999 557777776543 23488999999999999999999999 99999999999999
Q ss_pred ---CCCCceEEeecccceeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhcccccc
Q 041438 613 ---DLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS 689 (752)
Q Consensus 613 ---~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~ 689 (752)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-- 247 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH-- 247 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--
T ss_pred ccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH--
Confidence 56789999999999875432 2345899999999999999999999999999999999999999853211000
Q ss_pred ccchHhhhcc------------------CCCCC-------------------ChhhHHHHHHHHHHHHhccCcCCCCCCC
Q 041438 690 SNMNIEILDS------------------RLPYP-------------------SLDVQNKFMSIMQVAFSCLDQNPVSRPT 732 (752)
Q Consensus 690 ~~~~~~~~~~------------------~~~~~-------------------~~~~~~~~~~l~~li~~cl~~dP~~Rps 732 (752)
.......... ...++ .......+.++.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt 327 (355)
T 2eu9_A 248 LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRIT 327 (355)
T ss_dssp HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcC
Confidence 0000000000 00000 0011234567899999999999999999
Q ss_pred HHHHHHH
Q 041438 733 MKRFEVQ 739 (752)
Q Consensus 733 ~~evl~~ 739 (752)
++|+++|
T Consensus 328 ~~e~l~h 334 (355)
T 2eu9_A 328 LAEALLH 334 (355)
T ss_dssp HHHHTTS
T ss_pred HHHHhcC
Confidence 9999865
No 261
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.7e-35 Score=326.64 Aligned_cols=234 Identities=21% Similarity=0.236 Sum_probs=172.0
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------Cccc------cCCceEEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------NFCS------HPRQSFIVY 552 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------~~~~------~~~~~~lV~ 552 (752)
..+|++.+.||+|+||.||+|+. .+|+.||||++...... +++. +....++||
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~ 132 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 132 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeeh
Confidence 45799999999999999999996 46999999988543221 1111 112367899
Q ss_pred EeccCCChHHHhccC-ccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCC-CceEEeecccceecc
Q 041438 553 EYLESGSLDKILNND-ASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLG-YEAHVSDFRIAKFLN 630 (752)
Q Consensus 553 E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~-~~~kl~DfG~a~~~~ 630 (752)
||+++ ++.+.+... .....+++..++.++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+++...
T Consensus 133 e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 133 DYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp ECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred hcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 99987 676666432 1234589999999999999999999999 99999999999999955 568999999999765
Q ss_pred CCCCCcccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHhCCCCcchhhccccc----------cccchHhhhcc
Q 041438 631 LDSSNWSKLAGTHGNVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSS----------SSNMNIEILDS 699 (752)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~----------~~~~~~~~~~~ 699 (752)
... .....+||+.|+|||++.+. .++.++|||||||++|||++|+.||......... ..+.... ...
T Consensus 209 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~-~~~ 286 (420)
T 1j1b_A 209 RGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNP 286 (420)
T ss_dssp TTC-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHH-HCS
T ss_pred cCC-CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh-hCh
Confidence 332 23345889999999998765 6899999999999999999999999632110000 0000000 010
Q ss_pred C---CCCCC---hhh-----HHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 700 R---LPYPS---LDV-----QNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 700 ~---~~~~~---~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
. ..++. ..+ ...++++.+++.+||+.||++|||+.|+++|
T Consensus 287 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 287 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp CCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 0 11110 001 1235678999999999999999999999976
No 262
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.7e-35 Score=311.90 Aligned_cols=233 Identities=23% Similarity=0.342 Sum_probs=169.5
Q ss_pred hhcccccceeeccCCceEEEEEE-eCCCcEEEEEccCCCCCC-------------------------CccccCCceEEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVKKFHSPLPD-------------------------NFCSHPRQSFIVY 552 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~lV~ 552 (752)
..++|++.+.||+|+||.||+|+ ..+++.||||++...... +++...+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 46789999999999999999998 457899999988643211 3345567889999
Q ss_pred EeccCCChHHHhccC-----ccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccce
Q 041438 553 EYLESGSLDKILNND-----ASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAK 627 (752)
Q Consensus 553 E~~~~g~L~~~l~~~-----~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~ 627 (752)
||+++++|.+++... .....+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 999999999998741 1123488999999999999999999999 99999999999999999999999999997
Q ss_pred eccCCCC-----CcccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCC
Q 041438 628 FLNLDSS-----NWSKLAGTHGNVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRL 701 (752)
Q Consensus 628 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 701 (752)
....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ............
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~ 244 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP-----MKVLMLTLQNDP 244 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCG-----GGHHHHHHTSSC
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCch-----hhHHHHHhccCC
Confidence 6543221 1223479999999998875 5689999999999999999999999863211 111111111111
Q ss_pred CC-CC-----hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 702 PY-PS-----LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 702 ~~-~~-----~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
+. .. ......+.++.+++.+||+.||++|||++|+++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 245 PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp CCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 10 00 0012334578899999999999999999999875
No 263
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.2e-35 Score=319.70 Aligned_cols=242 Identities=19% Similarity=0.215 Sum_probs=175.5
Q ss_pred chHHHHHHhhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-------------------------------
Q 041438 491 IVYEEIIRATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD------------------------------- 539 (752)
Q Consensus 491 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------------------- 539 (752)
..++++....++|++.+.||+|+||.||+|+..+|+.||||++......
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 4567888899999999999999999999999888999999987542110
Q ss_pred ----Ccc-----ccCCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCE
Q 041438 540 ----NFC-----SHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNV 610 (752)
Q Consensus 540 ----~~~-----~~~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NI 610 (752)
+++ ......|+||||+.+ +|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NI 165 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQR--IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNI 165 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred cceeeeEEeccCCCcceEEEEEccCCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHE
Confidence 122 223467999999985 8888887543 3588999999999999999999999 999999999999
Q ss_pred EeCCCCceEEeecccceeccCCCCCcccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCcchhhccccc-
Q 041438 611 LLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSS- 688 (752)
Q Consensus 611 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~- 688 (752)
+++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.........
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~ 244 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN 244 (362)
T ss_dssp EECTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred EEcCCCCEEEEecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 9999999999999999865432 22344578999999998877 66899999999999999999999998632110000
Q ss_pred -----------------cccchHhhhccC-CCCCCh----hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 689 -----------------SSNMNIEILDSR-LPYPSL----DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 689 -----------------~~~~~~~~~~~~-~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
............ ...+.. .....++.+.+++.+||+.||++|||++|+++|
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 000000000010 011110 112234578999999999999999999999976
No 264
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.1e-35 Score=339.09 Aligned_cols=229 Identities=22% Similarity=0.293 Sum_probs=177.6
Q ss_pred cccccce-eeccCCceEEEEEEeC---CCcEEEEEccCCCCCC-------------------------CccccCCceEEE
Q 041438 501 NDFDAKH-CIGKGGHGSVYIARVP---SGEIFAVKKFHSPLPD-------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 501 ~~y~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~lV 551 (752)
+++.+.+ .||+|+||.||+|... ++..||||+++..... +++. .+..++|
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~-~~~~~lv 413 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLV 413 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEE-SSSEEEE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEec-cCCeEEE
Confidence 3444444 8999999999999853 5678999999764321 2333 3568999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
|||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 414 ~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp EECCTTCBHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred EEeCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 99999999999997543 4589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCc---ccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhccC-CCCCCh
Q 041438 632 DSSNW---SKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDSR-LPYPSL 706 (752)
Q Consensus 632 ~~~~~---~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 706 (752)
..... ....+++.|+|||++.+..++.++|||||||++|||++ |+.||... ...+....+.... ...+
T Consensus 489 ~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~-----~~~~~~~~i~~~~~~~~p-- 561 (613)
T 2ozo_A 489 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM-----KGPEVMAFIEQGKRMECP-- 561 (613)
T ss_dssp -------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----CSHHHHHHHHTTCCCCCC--
T ss_pred CCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----CHHHHHHHHHcCCCCCCC--
Confidence 32211 12245689999999999999999999999999999998 99998521 1122222222222 2222
Q ss_pred hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 707 DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 707 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
..+++++.++|.+||+.||++||+++++++.|+.+.
T Consensus 562 --~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 562 --PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp --TTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred --CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 345678999999999999999999999999999875
No 265
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.1e-35 Score=318.61 Aligned_cols=228 Identities=20% Similarity=0.246 Sum_probs=174.9
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------------Cccc-----cCCc
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-------------------------NFCS-----HPRQ 547 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~-----~~~~ 547 (752)
..++|++.+.||+|+||.||+|+. .+++.||||++...... +++. ....
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 457899999999999999999984 57889999998643211 1121 2246
Q ss_pred eEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccce
Q 041438 548 SFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAK 627 (752)
Q Consensus 548 ~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~ 627 (752)
.|+||||+.+ +|.+++... .+++.++..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||.++
T Consensus 105 ~~iv~e~~~~-~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 105 VYIVQDLMET-DLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp EEEEEECCSE-EHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEcccCc-CHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceE
Confidence 8999999985 999998653 388999999999999999999999 99999999999999999999999999998
Q ss_pred eccCCCCC---cccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhc-----
Q 041438 628 FLNLDSSN---WSKLAGTHGNVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILD----- 698 (752)
Q Consensus 628 ~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~----- 698 (752)
........ .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ......+..
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~i~~~~~~~ 251 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY-----LDQLNHILGILGSP 251 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSG-----GGHHHHHHHHHCSC
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCCh-----HHHHHHHHHHhCCC
Confidence 76533221 234589999999998654 4589999999999999999999999853211 111111100
Q ss_pred ------------------cCC---CCCC-hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 699 ------------------SRL---PYPS-LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 699 ------------------~~~---~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
... ..+. ......+.++.+++.+||+.||++|||++|+++|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 0000 0012235678999999999999999999999976
No 266
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=8.9e-36 Score=322.47 Aligned_cols=232 Identities=22% Similarity=0.301 Sum_probs=178.8
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------------CccccCCceEEEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-------------------------NFCSHPRQSFIVYE 553 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~lV~E 553 (752)
.++|++.+.||+|+||.||+|+. .+++.||+|+++..... +++...+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 56899999999999999999995 47899999988654211 34556778999999
Q ss_pred eccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCC
Q 041438 554 YLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS 633 (752)
Q Consensus 554 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~ 633 (752)
|+++++|.+++.... .+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 185 (360)
T ss_dssp CCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH-
T ss_pred CCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc-
Confidence 999999999997643 4888999999999999999999832 8999999999999999999999999999765322
Q ss_pred CCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhcccc--------------------------
Q 041438 634 SNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS-------------------------- 687 (752)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~-------------------------- 687 (752)
......||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 186 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (360)
T 3eqc_A 186 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 264 (360)
T ss_dssp -C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred -cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence 22345799999999999999999999999999999999999999852111000
Q ss_pred -------cc----ccchHhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 041438 688 -------SS----SNMNIEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQS 740 (752)
Q Consensus 688 -------~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 740 (752)
.. ......+.....+.. .....+.++.+++.+||+.||++|||++|+++|-
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 326 (360)
T 3eqc_A 265 NKFGMDSRPPMAIFELLDYIVNEPPPKL--PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326 (360)
T ss_dssp ---------CCCHHHHHHHHHHSCCCCC--CTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred cccccCCCCcccchhhhhHHhccCCCCC--CcccccHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 00 000011111111110 1122455789999999999999999999999763
No 267
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3e-35 Score=318.53 Aligned_cols=229 Identities=20% Similarity=0.268 Sum_probs=158.5
Q ss_pred hcccccceeeccCCceEEEEEE-eCCCcEEEEEccCCCCCC--------------------------Ccc------ccCC
Q 041438 500 TNDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVKKFHSPLPD--------------------------NFC------SHPR 546 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--------------------------~~~------~~~~ 546 (752)
.++|++.+.||+|+||.||+|+ ..+|+.||||++...... +++ ....
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 5789999999999999999998 467999999998654321 112 1235
Q ss_pred ceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccc
Q 041438 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIA 626 (752)
Q Consensus 547 ~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a 626 (752)
..|+||||+ +++|.+++... .+++..+..++.||++||+|||+. ||+||||||+||+++.++.+||+|||++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a 179 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 179 (367)
T ss_dssp CCEEEEECC-CEECC-----C----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC----
T ss_pred eEEEEeccc-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccc
Confidence 679999999 56999988652 489999999999999999999999 9999999999999999999999999999
Q ss_pred eeccCCCCCcccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCcchhhcccc------------------
Q 041438 627 KFLNLDSSNWSKLAGTHGNVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS------------------ 687 (752)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~------------------ 687 (752)
+..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||........
T Consensus 180 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~ 256 (367)
T 2fst_X 180 RHTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred cccccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 875422 344589999999999877 6789999999999999999999999853211000
Q ss_pred ccccchHhhhccCCCCCChhh----HHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 688 SSSNMNIEILDSRLPYPSLDV----QNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
................+.... ...++.+.+++.+||+.||++|||++|+++|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000000111111111111111 1234678999999999999999999999976
No 268
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.9e-35 Score=309.37 Aligned_cols=228 Identities=20% Similarity=0.290 Sum_probs=182.9
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccCCceEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV 551 (752)
..++|++.+.||+|+||.||+|+. .+++.||||++...... +++......++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 457899999999999999999995 47899999997543211 345567788999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCC---CceEEeeccccee
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLG---YEAHVSDFRIAKF 628 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~---~~~kl~DfG~a~~ 628 (752)
|||+++++|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.+ +.+||+|||.+..
T Consensus 100 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~ 173 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (287)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred EEccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCccee
Confidence 99999999998886543 488999999999999999999999 99999999999999754 4699999999987
Q ss_pred ccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhh
Q 041438 629 LNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDV 708 (752)
Q Consensus 629 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (752)
..... ......||+.|+|||++.+ .++.++||||||+++|+|++|+.||... ........+.......+....
T Consensus 174 ~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~ 246 (287)
T 2wei_A 174 FQQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK-----NEYDILKRVETGKYAFDLPQW 246 (287)
T ss_dssp BCCCS-SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCSGGG
T ss_pred ecCCC-ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCCCCCchhh
Confidence 65332 2334468999999998765 4899999999999999999999998521 122233334444444433333
Q ss_pred HHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 709 QNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 709 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
...+.++.+++.+||+.||++|||++|++++
T Consensus 247 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 247 RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 4566789999999999999999999999985
No 269
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1e-35 Score=338.21 Aligned_cols=233 Identities=23% Similarity=0.362 Sum_probs=186.0
Q ss_pred hhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-----------------------CccccCCceEEEEEec
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-----------------------NFCSHPRQSFIVYEYL 555 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~lV~E~~ 555 (752)
..++|++.++||+|+||.||+|+...++.||||+++..... +++. .+..|+||||+
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~lv~e~~ 343 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 343 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEe-eccceEeeehh
Confidence 45679999999999999999999888889999998764322 2233 36789999999
Q ss_pred cCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCC-C
Q 041438 556 ESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDS-S 634 (752)
Q Consensus 556 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~-~ 634 (752)
++|+|.+++.... ...+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++...... .
T Consensus 344 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 419 (535)
T 2h8h_A 344 SKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 419 (535)
T ss_dssp TTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH
T ss_pred cCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCcee
Confidence 9999999997532 23488999999999999999999999 99999999999999999999999999998654211 0
Q ss_pred CcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhcc-CCCCCChhhHHHH
Q 041438 635 NWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDS-RLPYPSLDVQNKF 712 (752)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 712 (752)
......++..|+|||++.+..++.++|||||||++|||++ |+.||... ...+....+... +.+.+ ..++
T Consensus 420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~-----~~~~~~~~i~~~~~~~~~----~~~~ 490 (535)
T 2h8h_A 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-----VNREVLDQVERGYRMPCP----PECP 490 (535)
T ss_dssp TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC-----CHHHHHHHHHTTCCCCCC----TTCC
T ss_pred cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHcCCCCCCC----CCCC
Confidence 1122356788999999998899999999999999999999 99998521 111222222222 12222 3455
Q ss_pred HHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 713 MSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 713 ~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
..+.++|.+||+.||++|||++++++.|+++..
T Consensus 491 ~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 491 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 678999999999999999999999999999853
No 270
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.2e-35 Score=314.74 Aligned_cols=231 Identities=20% Similarity=0.294 Sum_probs=178.8
Q ss_pred HhhcccccceeeccCCceEEEEEEe--CCCcEEEEEccCCCCCC-----------------------------Cccc---
Q 041438 498 RATNDFDAKHCIGKGGHGSVYIARV--PSGEIFAVKKFHSPLPD-----------------------------NFCS--- 543 (752)
Q Consensus 498 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~-----------------------------~~~~--- 543 (752)
++.++|++.+.||+|+||.||+|+. .+|+.||+|+++..... +++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 4678999999999999999999996 46889999987532110 1222
Q ss_pred --cCCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEe
Q 041438 544 --HPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVS 621 (752)
Q Consensus 544 --~~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~ 621 (752)
.....++||||+. |+|.+++..... ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 3456799999998 599999976542 3488999999999999999999999 99999999999999999999999
Q ss_pred ecccceeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhh----
Q 041438 622 DFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEIL---- 697 (752)
Q Consensus 622 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~---- 697 (752)
|||.++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.
T Consensus 163 Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~i~~~~~ 236 (326)
T 1blx_A 163 DFGLARIYSFQM-ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-----DQLGKILDVIG 236 (326)
T ss_dssp SCCSCCCCCGGG-GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHHHHC
T ss_pred cCcccccccCCC-CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-----HHHHHHHHHcC
Confidence 999998754322 233457899999999999999999999999999999999999998632110 0000000
Q ss_pred ------------------ccCCCCC-ChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 698 ------------------DSRLPYP-SLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 698 ------------------~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
......+ .......+..+.+++.+||+.||++|||++|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp CCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000 00112345678899999999999999999999965
No 271
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.5e-35 Score=312.14 Aligned_cols=233 Identities=18% Similarity=0.272 Sum_probs=176.2
Q ss_pred hhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC--------------------------CccccCCceEEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIVY 552 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV~ 552 (752)
..++|++.+.||+|+||.||+|+... .||+|+++..... +++.+....++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 46789999999999999999998743 5999988643211 3445567789999
Q ss_pred EeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCC
Q 041438 553 EYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLD 632 (752)
Q Consensus 553 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~ 632 (752)
||+++++|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||+++ ++.+||+|||+++.....
T Consensus 109 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~ 182 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL 182 (319)
T ss_dssp BCCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC-----
T ss_pred ecccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccccc
Confidence 9999999999997643 3588899999999999999999999 999999999999998 679999999998765321
Q ss_pred -----CCCcccccCCCCccCcccccc---------CCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhc
Q 041438 633 -----SSNWSKLAGTHGNVAPELAYT---------MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILD 698 (752)
Q Consensus 633 -----~~~~~~~~gt~~y~aPE~~~~---------~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~ 698 (752)
........||+.|+|||++.+ ..++.++|||||||++|||++|+.||... ........+..
T Consensus 183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~-----~~~~~~~~~~~ 257 (319)
T 2y4i_B 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ-----PAEAIIWQMGT 257 (319)
T ss_dssp -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC-----CHHHHHHHHHT
T ss_pred cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHhcc
Confidence 112233468999999998874 34788999999999999999999998521 11112222222
Q ss_pred cCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcC
Q 041438 699 SRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYN 746 (752)
Q Consensus 699 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 746 (752)
...+.. .....+.++.+++.+||+.||++|||++|+++.|+++...
T Consensus 258 ~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 258 GMKPNL--SQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp TCCCCC--CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred CCCCCC--CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 221111 1122345688999999999999999999999999988643
No 272
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-35 Score=314.77 Aligned_cols=238 Identities=23% Similarity=0.353 Sum_probs=183.5
Q ss_pred hcccccceeeccCCceEEEEEEe-----CCCcEEEEEccCCCCCC------------------------Ccccc--CCce
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-----PSGEIFAVKKFHSPLPD------------------------NFCSH--PRQS 548 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~------------------------~~~~~--~~~~ 548 (752)
.++|++.+.||+|+||.||+|+. .+++.||||++...... +++.. ....
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 46799999999999999999983 46899999998654321 12222 2468
Q ss_pred EEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeeccccee
Q 041438 549 FIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKF 628 (752)
Q Consensus 549 ~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~ 628 (752)
++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~ 194 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKV 194 (326)
T ss_dssp EEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence 99999999999999997653 3488999999999999999999999 999999999999999999999999999988
Q ss_pred ccCCCCC---cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhc-----cccccc-c----chHh
Q 041438 629 LNLDSSN---WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFE-----MSSSSS-N----MNIE 695 (752)
Q Consensus 629 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~-----~~~~~~-~----~~~~ 695 (752)
....... .....++..|+|||++.+..++.++|||||||++|||+||..||..... ...... . ....
T Consensus 195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (326)
T 2w1i_A 195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 274 (326)
T ss_dssp CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHH
Confidence 7543321 1223577789999999988899999999999999999999999753210 000000 0 1111
Q ss_pred hhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 696 ILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
.+......+. ....+.++.+++.+||+.||++|||++|+++.|+++.
T Consensus 275 ~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 275 LLKNNGRLPR--PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp HHHTTCCCCC--CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhhcCCCCCC--CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 2222111111 1345567899999999999999999999999999874
No 273
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.9e-35 Score=314.34 Aligned_cols=220 Identities=22% Similarity=0.315 Sum_probs=178.5
Q ss_pred HHhhcccccceeeccCCceEEEEEE-eCCCcEEEEEccCCCCCC--------------------------------Cccc
Q 041438 497 IRATNDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVKKFHSPLPD--------------------------------NFCS 543 (752)
Q Consensus 497 ~~~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--------------------------------~~~~ 543 (752)
....++|++.+.||+|+||.||+|+ ..+++.||||+++..... +++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 3456789999999999999999998 467899999988543211 3345
Q ss_pred cCCceEEEEEeccC-CChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeC-CCCceEEe
Q 041438 544 HPRQSFIVYEYLES-GSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLD-LGYEAHVS 621 (752)
Q Consensus 544 ~~~~~~lV~E~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~-~~~~~kl~ 621 (752)
..+..++||||+.+ ++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++ +++.+||+
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~ 192 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLI 192 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEEC
T ss_pred cCCcEEEEEEcCCCCccHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEe
Confidence 56788999999986 89999987543 488899999999999999999999 999999999999999 78899999
Q ss_pred ecccceeccCCCCCcccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccC
Q 041438 622 DFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSR 700 (752)
Q Consensus 622 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 700 (752)
|||+++..... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.... .+....
T Consensus 193 Dfg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----------~~~~~~ 259 (320)
T 3a99_A 193 DFGSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----------EIIRGQ 259 (320)
T ss_dssp CCTTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----------HHHHCC
T ss_pred eCccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-----------hhhccc
Confidence 99999876532 2334579999999999887765 688999999999999999999985321 111222
Q ss_pred CCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 701 LPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 701 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
...+ ...++++.+++.+||+.||++|||++|++++
T Consensus 260 ~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 260 VFFR----QRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp CCCS----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cccc----ccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 2222 2234578899999999999999999999875
No 274
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.6e-35 Score=309.87 Aligned_cols=228 Identities=21% Similarity=0.258 Sum_probs=177.1
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCC----C------------------------Ccc--ccCCc
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLP----D------------------------NFC--SHPRQ 547 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~------------------------~~~--~~~~~ 547 (752)
..++|++.+.||+|+||.||+|+. .+++.||+|+++.... . +++ .+...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 357899999999999999999995 5789999998854210 0 222 34567
Q ss_pred eEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccce
Q 041438 548 SFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAK 627 (752)
Q Consensus 548 ~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~ 627 (752)
.++||||++++ +.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 89999999986 777776543 24588999999999999999999999 99999999999999999999999999998
Q ss_pred eccCCC--CCcccccCCCCccCccccccCC--CCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCC
Q 041438 628 FLNLDS--SNWSKLAGTHGNVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPY 703 (752)
Q Consensus 628 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~--~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 703 (752)
...... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.. .........+.......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~-----~~~~~~~~~i~~~~~~~ 232 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG-----DNIYKLFENIGKGSYAI 232 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC-----SSHHHHHHHHHHCCCCC
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC-----chHHHHHHHHhcCCCCC
Confidence 765322 1223457899999999987654 37899999999999999999999852 11222233333444443
Q ss_pred CChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 041438 704 PSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQS 740 (752)
Q Consensus 704 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 740 (752)
+. ..++.+.+++.+||+.||++|||++|+++|-
T Consensus 233 ~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 265 (305)
T 2wtk_C 233 PG----DCGPPLSDLLKGMLEYEPAKRFSIRQIRQHS 265 (305)
T ss_dssp CS----SSCHHHHHHHHHHTCSSTTTSCCHHHHHHSH
T ss_pred CC----ccCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 32 3456788999999999999999999999763
No 275
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=325.42 Aligned_cols=238 Identities=18% Similarity=0.249 Sum_probs=161.5
Q ss_pred hhccccc-ceeeccCCceEEEEEEeC---CCcEEEEEccCCCCCC----------------------Ccc--ccCCceEE
Q 041438 499 ATNDFDA-KHCIGKGGHGSVYIARVP---SGEIFAVKKFHSPLPD----------------------NFC--SHPRQSFI 550 (752)
Q Consensus 499 ~~~~y~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~----------------------~~~--~~~~~~~l 550 (752)
..+.|++ .++||+|+||.||+|+.. +++.||||++...... +++ ......|+
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 3456776 558999999999999954 5889999998754322 223 34678899
Q ss_pred EEEeccCCChHHHhccCc------cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEe----CCCCceEE
Q 041438 551 VYEYLESGSLDKILNNDA------SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLL----DLGYEAHV 620 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~------~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll----~~~~~~kl 620 (752)
||||+.+ +|.+++.... ....+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++.+||
T Consensus 98 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 9999976 8888776322 122488999999999999999999999 99999999999999 67789999
Q ss_pred eecccceeccCCC---CCcccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHhCCCCcchhhccccc----cccc
Q 041438 621 SDFRIAKFLNLDS---SNWSKLAGTHGNVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSS----SSNM 692 (752)
Q Consensus 621 ~DfG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~----~~~~ 692 (752)
+|||+|+...... ......+||+.|+|||++.+. .++.++||||+||++|||++|+.||......... ....
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 253 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence 9999998765332 122345899999999998874 4899999999999999999999999532110000 0000
Q ss_pred hHhhhcc----------------------------CCCCCChh------hHHHHHHHHHHHHhccCcCCCCCCCHHHHHH
Q 041438 693 NIEILDS----------------------------RLPYPSLD------VQNKFMSIMQVAFSCLDQNPVSRPTMKRFEV 738 (752)
Q Consensus 693 ~~~~~~~----------------------------~~~~~~~~------~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 738 (752)
...+... ........ .......+.++|.+||+.||++|||++|+++
T Consensus 254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000 00000000 0001346889999999999999999999998
Q ss_pred HH
Q 041438 739 QS 740 (752)
Q Consensus 739 ~L 740 (752)
|-
T Consensus 334 hp 335 (405)
T 3rgf_A 334 DP 335 (405)
T ss_dssp SG
T ss_pred Ch
Confidence 63
No 276
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.5e-35 Score=317.36 Aligned_cols=229 Identities=21% Similarity=0.318 Sum_probs=181.6
Q ss_pred hcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCC--------------------C--------------------
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLP--------------------D-------------------- 539 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------------~-------------------- 539 (752)
.++|++.+.||+|+||.||+|+. +++.||||++..... .
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 57899999999999999999999 999999998753210 0
Q ss_pred -CccccCCceEEEEEeccCCChHHH------hccCccccccCHHHHHHHHHHHHHHHHHHHh-CCCCCeeecCCCCCCEE
Q 041438 540 -NFCSHPRQSFIVYEYLESGSLDKI------LNNDASAKELGWTQRLNVIKGVADALFYLHN-NCFPPIVHWDISSKNVL 611 (752)
Q Consensus 540 -~~~~~~~~~~lV~E~~~~g~L~~~------l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~~~~ivH~DlKp~NIl 611 (752)
+++.+.+..++||||+++|+|.++ +.... ...+++..++.++.|++.||+|||+ . ||+||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 345567889999999999999998 54321 3458999999999999999999999 8 9999999999999
Q ss_pred eCCCCceEEeecccceeccCCCCCcccccCCCCccCccccccC-CCCC-ccchhhHHHHHHHHHhCCCCcchhhcccccc
Q 041438 612 LDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTM-KVTE-KCDVYSFGVLALEVIKGKHPRDFLFEMSSSS 689 (752)
Q Consensus 612 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-ksDIwSlGvil~elltg~~pf~~~~~~~~~~ 689 (752)
++.++.+||+|||.+...... ......||+.|+|||++.+. .++. ++|||||||++|||++|+.||.... ..
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~ 258 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI----SL 258 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS----CS
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC----cH
Confidence 999999999999999876433 33445799999999999877 5665 9999999999999999999985211 11
Q ss_pred ccchHhhhccCCCCCCh---------------hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 690 SNMNIEILDSRLPYPSL---------------DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 690 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
......+.......+.. .....+.++.+++.+||+.||++|||++|+++|
T Consensus 259 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 259 VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 22223333333322210 013355678999999999999999999999875
No 277
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=7.7e-34 Score=315.96 Aligned_cols=330 Identities=24% Similarity=0.244 Sum_probs=181.4
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCC-------------CeeecCCCcccccCC
Q 041438 84 GRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKL-------------EYLDFLTNKLSGHIP 150 (752)
Q Consensus 84 ~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------------~~L~L~~N~l~~~~p 150 (752)
.++..++++++.+ |++++ +|+.+++|++|++++|++++.+|..++++++| ++|++++|++++. |
T Consensus 11 ~~L~~L~l~~n~l-~~iP~-~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~l-p 87 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPV-EAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSL-P 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCC-C
T ss_pred ccchhhhcccCch-hhCCh-hHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccC-C
Confidence 3456677777777 66654 57888888888888888888888888887764 7888888887753 3
Q ss_pred cccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccc
Q 041438 151 SEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKS 230 (752)
Q Consensus 151 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 230 (752)
.. .++|++|+|++|.+++ +|.. +++|++|++++|++++. |.. .++|++|+|++|++++ +| .|+++++
T Consensus 88 ~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~ 154 (454)
T 1jl5_A 88 EL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSF 154 (454)
T ss_dssp SC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTT
T ss_pred CC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCC
Confidence 31 3677777888777776 5543 25677777777777652 221 1567777777777765 45 4677777
Q ss_pred cccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEc
Q 041438 231 LFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISL 310 (752)
Q Consensus 231 L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 310 (752)
|++|++++|++++ +|.. .++|++|++++|++++ +| .+..+++|++|++++|++++ +|... .+|+.|++
T Consensus 155 L~~L~l~~N~l~~-lp~~-----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l 222 (454)
T 1jl5_A 155 LKIIDVDNNSLKK-LPDL-----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVA 222 (454)
T ss_dssp CCEEECCSSCCSC-CCCC-----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEEC
T ss_pred CCEEECCCCcCcc-cCCC-----cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEEC
Confidence 7777777777765 3321 2466777777777665 34 46666777777777776664 33322 35666666
Q ss_pred cCCcCcccCCcccCCCcccceeeccccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCC
Q 041438 311 SGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEK 390 (752)
Q Consensus 311 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 390 (752)
++|+++ .+| .++.+++|++|++++|++++++. .+++|+.|++++|++++ +|.. .++|++|++++|++++.
T Consensus 223 ~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~~----~~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l 292 (454)
T 1jl5_A 223 GNNILE-ELP-ELQNLPFLTTIYADNNLLKTLPD----LPPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL 292 (454)
T ss_dssp CSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCCS----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE
T ss_pred cCCcCC-ccc-ccCCCCCCCEEECCCCcCCcccc----cccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc
Confidence 666666 344 36666666666666666665332 12556666666666554 2222 24555555555555441
Q ss_pred --CCcc-------------cccc-cccceEEccCCcCCcCCchhhhccCCCcEEEccCCcccCcCCCCcccCCCCccccc
Q 041438 391 --ISSR-------------ICRM-ESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPNSTTFRDAPLEALQ 454 (752)
Q Consensus 391 --~~~~-------------~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~ 454 (752)
.|.. +..+ ++|++|++++|+++++ |.. +++|+.|++++|++++ +|. ....+....+.
T Consensus 293 ~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~l-p~~---~~~L~~L~L~~N~l~~-lp~--~l~~L~~L~L~ 365 (454)
T 1jl5_A 293 SELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIEL-PAL---PPRLERLIASFNHLAE-VPE--LPQNLKQLHVE 365 (454)
T ss_dssp SCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSC-CCC--CCTTCCEEECC
T ss_pred cCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCccccc-ccc---CCcCCEEECCCCcccc-ccc--hhhhccEEECC
Confidence 1110 1112 3556666666666553 322 3556666666666653 343 23334444445
Q ss_pred CCCC
Q 041438 455 GNKG 458 (752)
Q Consensus 455 ~n~~ 458 (752)
+|+.
T Consensus 366 ~N~l 369 (454)
T 1jl5_A 366 YNPL 369 (454)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 5543
No 278
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=8e-35 Score=316.18 Aligned_cols=228 Identities=20% Similarity=0.285 Sum_probs=169.8
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccCCc-----
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQ----- 547 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~----- 547 (752)
.++|++.+.||+|+||.||+|+. .+|+.||||++...... +++.....
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 57899999999999999999984 57999999998754322 22222332
Q ss_pred -eEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccc
Q 041438 548 -SFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIA 626 (752)
Q Consensus 548 -~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a 626 (752)
.++||||+.+ +|.+++.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 121 ~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a 191 (371)
T 4exu_A 121 DFYLVMPFMQT-DLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 191 (371)
T ss_dssp CCEEEEECCCE-EHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred eEEEEEccccc-cHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcc
Confidence 3999999985 88888742 388999999999999999999999 9999999999999999999999999999
Q ss_pred eeccCCCCCcccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCcchhhccccc-----------------
Q 041438 627 KFLNLDSSNWSKLAGTHGNVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSS----------------- 688 (752)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~----------------- 688 (752)
+..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.........
T Consensus 192 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 192 RHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred cccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHH
Confidence 865432 334578999999999887 67899999999999999999999999632110000
Q ss_pred -cccchHhhhccCCCCCChh----hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 689 -SSNMNIEILDSRLPYPSLD----VQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 689 -~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
...............+... ....++++.+++.+||+.||++|||++|+++|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000000001111111111 12235678999999999999999999999976
No 279
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.7e-35 Score=309.13 Aligned_cols=229 Identities=24% Similarity=0.371 Sum_probs=171.1
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-----------------------Ccc------------
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-----------------------NFC------------ 542 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----------------------~~~------------ 542 (752)
..++|++.+.||+|+||.||+|+. .+++.||||++...... +++
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 467899999999999999999995 57999999987532110 111
Q ss_pred -ccCCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEe
Q 041438 543 -SHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVS 621 (752)
Q Consensus 543 -~~~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~ 621 (752)
......|+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~ 158 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIG 158 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEe
Confidence 12456899999999999999997543 3477899999999999999999999 99999999999999999999999
Q ss_pred ecccceeccCCC--------------CCcccccCCCCccCccccccC-CCCCccchhhHHHHHHHHHhCCCCcchhhccc
Q 041438 622 DFRIAKFLNLDS--------------SNWSKLAGTHGNVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMS 686 (752)
Q Consensus 622 DfG~a~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~-~~~~ksDIwSlGvil~elltg~~pf~~~~~~~ 686 (752)
|||.+....... .......||+.|+|||++.+. .++.++||||+||++|||++ ||....
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~--- 232 (303)
T 1zy4_A 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM--- 232 (303)
T ss_dssp CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH---
T ss_pred eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch---
Confidence 999998754221 112335789999999998765 68999999999999999998 442111
Q ss_pred cccccchHhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 687 SSSSNMNIEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
........+.......+.......+..+.+++.+||+.||++|||++|+++|
T Consensus 233 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 233 -ERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp -HHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -hHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 0111222222223333322223455678899999999999999999999975
No 280
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=6.1e-35 Score=309.50 Aligned_cols=228 Identities=21% Similarity=0.285 Sum_probs=172.8
Q ss_pred hhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC----------------------------CccccCCceEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD----------------------------NFCSHPRQSFI 550 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------------~~~~~~~~~~l 550 (752)
..++|++.+.||+|+||.||+|+..+++.||||++...... +++......++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 46789999999999999999999888999999988543221 33455678899
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
||| +.+++|.+++.... .+++..++.++.|+++||+|||+. +|+||||||+||++++ +.+||+|||+++...
T Consensus 106 v~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ 177 (313)
T ss_dssp EEC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC--
T ss_pred EEe-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeecccccccc
Confidence 999 55779999997643 478899999999999999999999 9999999999999974 899999999998765
Q ss_pred CCCCC--cccccCCCCccCcccccc-----------CCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhh
Q 041438 631 LDSSN--WSKLAGTHGNVAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEIL 697 (752)
Q Consensus 631 ~~~~~--~~~~~gt~~y~aPE~~~~-----------~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 697 (752)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ........+.
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----~~~~~~~~~~ 253 (313)
T 3cek_A 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII----NQISKLHAII 253 (313)
T ss_dssp ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC----SHHHHHHHHH
T ss_pred CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH----HHHHHHHHHH
Confidence 33221 233478999999999875 467889999999999999999999985211 1111222233
Q ss_pred ccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 041438 698 DSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQS 740 (752)
Q Consensus 698 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 740 (752)
+........ ...+.++.+++.+||+.||++||+++|++++-
T Consensus 254 ~~~~~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 254 DPNHEIEFP--DIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp CTTSCCCCC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred hcccccCCc--ccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 322221110 12245688999999999999999999999764
No 281
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=8.3e-35 Score=316.32 Aligned_cols=229 Identities=17% Similarity=0.236 Sum_probs=174.5
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC----------------------------------Ccccc
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD----------------------------------NFCSH 544 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----------------------------------~~~~~ 544 (752)
.++|++.+.||+|+||.||+|+. .+++.||||+++..... +++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 46899999999999999999994 67999999988643110 11111
Q ss_pred ----CCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeC------C
Q 041438 545 ----PRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLD------L 614 (752)
Q Consensus 545 ----~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~------~ 614 (752)
....++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+++ ||+||||||+||+++ .
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEH-RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTT
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhc-cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcC
Confidence 12689999999 7899999976432 34889999999999999999999953 899999999999994 4
Q ss_pred CCceEEeecccceeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccc-cccch
Q 041438 615 GYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSS-SSNMN 693 (752)
Q Consensus 615 ~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~-~~~~~ 693 (752)
.+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||......... .....
T Consensus 174 ~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 250 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250 (373)
T ss_dssp EEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred cceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence 457999999999876532 23457999999999999999999999999999999999999999632210000 00000
Q ss_pred H------------------------------------------hhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCC
Q 041438 694 I------------------------------------------EILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRP 731 (752)
Q Consensus 694 ~------------------------------------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 731 (752)
. .+.......+ ...+.++.++|.+||+.||++||
T Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFS----KDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCC----HHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCC----cchHHHHHHHHHHHhccCccccC
Confidence 0 0111111111 45677899999999999999999
Q ss_pred CHHHHHHH
Q 041438 732 TMKRFEVQ 739 (752)
Q Consensus 732 s~~evl~~ 739 (752)
|++|+++|
T Consensus 327 t~~ell~h 334 (373)
T 1q8y_A 327 DAGGLVNH 334 (373)
T ss_dssp CHHHHHTC
T ss_pred CHHHHhhC
Confidence 99999975
No 282
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=5.5e-35 Score=337.85 Aligned_cols=223 Identities=25% Similarity=0.359 Sum_probs=174.9
Q ss_pred eeeccCCceEEEEEEe---CCCcEEEEEccCCCCCC--------------------------CccccCCceEEEEEeccC
Q 041438 507 HCIGKGGHGSVYIARV---PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIVYEYLES 557 (752)
Q Consensus 507 ~~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV~E~~~~ 557 (752)
+.||+|+||.||+|.+ ..++.||||+++..... +++. .+..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 5799999999999964 35688999998753221 2333 4568899999999
Q ss_pred CChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCCCC--
Q 041438 558 GSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSN-- 635 (752)
Q Consensus 558 g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~~-- 635 (752)
|+|.+++.... .+++..+..|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+........
T Consensus 454 g~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 527 (635)
T 4fl3_A 454 GPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527 (635)
T ss_dssp EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred CCHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence 99999997543 488999999999999999999999 9999999999999999999999999999876543221
Q ss_pred -cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhccC-CCCCChhhHHHH
Q 041438 636 -WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDSR-LPYPSLDVQNKF 712 (752)
Q Consensus 636 -~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 712 (752)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||... ...+....+.... ...+ ..++
T Consensus 528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~-----~~~~~~~~i~~~~~~~~p----~~~~ 598 (635)
T 4fl3_A 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM-----KGSEVTAMLEKGERMGCP----AGCP 598 (635)
T ss_dssp -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC-----CHHHHHHHHHTTCCCCCC----TTCC
T ss_pred cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHcCCCCCCC----CCCC
Confidence 122356788999999999999999999999999999998 99998521 1112222222222 2222 3456
Q ss_pred HHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhc
Q 041438 713 MSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHY 745 (752)
Q Consensus 713 ~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 745 (752)
+++.++|.+||+.||++||+++++++.|+++.+
T Consensus 599 ~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 599 REMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 788999999999999999999999999998754
No 283
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-34 Score=319.02 Aligned_cols=229 Identities=21% Similarity=0.258 Sum_probs=167.4
Q ss_pred hhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC----------------------CccccCCceEEEEEecc
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD----------------------NFCSHPRQSFIVYEYLE 556 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~~~~lV~E~~~ 556 (752)
...+|++.+.||+|+||+||.....+++.||||++...... +++.+....|+|||||.
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 34578899999999999976655678999999988654221 33455677899999997
Q ss_pred CCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCC-----CCceEEeecccceeccC
Q 041438 557 SGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDL-----GYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 557 ~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~-----~~~~kl~DfG~a~~~~~ 631 (752)
+ +|.+++..... ...+..+..++.||++||+|||+. +|+||||||+||+++. ...+||+|||+|+....
T Consensus 102 g-~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 102 A-TLQEYVEQKDF--AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp E-EHHHHHHSSSC--CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred C-CHHHHHHhcCC--CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 5 99999976542 244556789999999999999999 9999999999999953 33588999999987653
Q ss_pred CC---CCcccccCCCCccCccccc---cCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhccCCCCC
Q 041438 632 DS---SNWSKLAGTHGNVAPELAY---TMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDSRLPYP 704 (752)
Q Consensus 632 ~~---~~~~~~~gt~~y~aPE~~~---~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (752)
.. .......||+.|+|||++. ...++.++||||+||++|||++ |..||... ................
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~------~~~~~~~~~~~~~~~~ 249 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKS------LQRQANILLGACSLDC 249 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBST------TTHHHHHHTTCCCCTT
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchh------hHHHHHHHhccCCccc
Confidence 32 1223457999999999987 4567889999999999999999 99998521 1111111111111111
Q ss_pred ChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 705 SLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 705 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
..........+.++|.+||+.||++|||++|+++|
T Consensus 250 ~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 250 LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 11123445668899999999999999999999964
No 284
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=306.31 Aligned_cols=219 Identities=22% Similarity=0.334 Sum_probs=172.8
Q ss_pred HhhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC----------------------------------Ccc
Q 041438 498 RATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD----------------------------------NFC 542 (752)
Q Consensus 498 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----------------------------------~~~ 542 (752)
...++|++.+.||+|+||.||+|+. .+++.||||+++..... +++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 3467899999999999999999984 57899999998643210 233
Q ss_pred ccCCceEEEEEe-ccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeC-CCCceEE
Q 041438 543 SHPRQSFIVYEY-LESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLD-LGYEAHV 620 (752)
Q Consensus 543 ~~~~~~~lV~E~-~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~-~~~~~kl 620 (752)
...+..++|||| +.+++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++ +++.+||
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEE
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEE
Confidence 445678999999 78899999997643 488999999999999999999999 999999999999999 8899999
Q ss_pred eecccceeccCCCCCcccccCCCCccCccccccCCC-CCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhcc
Q 041438 621 SDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDS 699 (752)
Q Consensus 621 ~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 699 (752)
+|||++...... ......||..|+|||++.+..+ +.++||||+||++|||++|+.||.... .+...
T Consensus 182 ~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----------~~~~~ 248 (312)
T 2iwi_A 182 IDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-----------EILEA 248 (312)
T ss_dssp CCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----------HHHHT
T ss_pred EEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-----------HHhhh
Confidence 999999876533 2344579999999999887666 458999999999999999999985321 12222
Q ss_pred CCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 700 RLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 700 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
....+ ...+.++.+++.+||+.||++|||++|+++|
T Consensus 249 ~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 249 ELHFP----AHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp CCCCC----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ccCCc----ccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 33332 2345578899999999999999999999975
No 285
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=8.6e-35 Score=308.96 Aligned_cols=227 Identities=20% Similarity=0.260 Sum_probs=166.9
Q ss_pred hcccccceeeccCCceEEEEEEeC-CCcEEEEEccCCCCCC------------------------Cc-------------
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVP-SGEIFAVKKFHSPLPD------------------------NF------------- 541 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------------------------~~------------- 541 (752)
.++|++.+.||+|+||.||+|+.. +++.||||++...... ++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 468999999999999999999964 5899999987533211 11
Q ss_pred -cccCCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeC-CCCceE
Q 041438 542 -CSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLD-LGYEAH 619 (752)
Q Consensus 542 -~~~~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~-~~~~~k 619 (752)
+.+....++||||++ |+|.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++ +++.+|
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~k 161 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG----PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLK 161 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC----CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEE
Confidence 134467899999998 5999998643 388899999999999999999999 999999999999997 567999
Q ss_pred EeecccceeccCCC---CCcccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHh
Q 041438 620 VSDFRIAKFLNLDS---SNWSKLAGTHGNVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIE 695 (752)
Q Consensus 620 l~DfG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~ 695 (752)
|+|||.++...... .......+|..|+|||.+.+ ..++.++|||||||++|||++|+.||...... .....
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-----~~~~~ 236 (320)
T 2i6l_A 162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL-----EQMQL 236 (320)
T ss_dssp ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH
T ss_pred EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH-----HHHHH
Confidence 99999998764321 12233467999999998765 67899999999999999999999998632110 11111
Q ss_pred hhccC----------------------CCCCC----hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 696 ILDSR----------------------LPYPS----LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 696 ~~~~~----------------------~~~~~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
+.... ...+. ......+.++.+++.+||+.||++|||++|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 237 ILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 11000 00000 0012345678999999999999999999999975
No 286
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.9e-34 Score=310.98 Aligned_cols=233 Identities=23% Similarity=0.281 Sum_probs=174.4
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------------Ccc-----ccCCc
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-------------------------NFC-----SHPRQ 547 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------~~~-----~~~~~ 547 (752)
..++|++.+.||+|+||.||+|+. .+|+.||||++...... +++ .....
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 357899999999999999999995 47999999998643211 111 12367
Q ss_pred eEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccce
Q 041438 548 SFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAK 627 (752)
Q Consensus 548 ~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~ 627 (752)
.++||||+.+ +|.+++... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++
T Consensus 89 ~~lv~e~~~~-~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 89 VYIIQELMQT-DLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEEEECCCSE-EHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEeccCc-cHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 8999999985 999998753 388999999999999999999999 99999999999999999999999999998
Q ss_pred eccCCCCC----------cccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCcchhhcccc---------
Q 041438 628 FLNLDSSN----------WSKLAGTHGNVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS--------- 687 (752)
Q Consensus 628 ~~~~~~~~----------~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~--------- 687 (752)
........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 240 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG 240 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhC
Confidence 76532211 123478999999998764 6789999999999999999999999853211000
Q ss_pred ----------ccccchHhhhccCCCCCCh----hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 688 ----------SSSNMNIEILDSRLPYPSL----DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 688 ----------~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
................+.. .....++++.+++.+||+.||++|||++|+++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000001111111111100 112345678999999999999999999999975
No 287
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4.3e-35 Score=312.71 Aligned_cols=232 Identities=23% Similarity=0.288 Sum_probs=159.1
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccCCceEEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIVY 552 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV~ 552 (752)
.++|++.+.||+|+||.||+|+. .+|+.||||+++..... +++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 47899999999999999999995 57999999988654221 3455677889999
Q ss_pred EeccCCChHHHhccCc--cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 553 EYLESGSLDKILNNDA--SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 553 E~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
||+++ +|.+++.... ....+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 99986 8888776311 1245889999999999999999999953 89999999999999999999999999998765
Q ss_pred CCCCCcccccCCCCccCcccc----ccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCC-CCCC
Q 041438 631 LDSSNWSKLAGTHGNVAPELA----YTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRL-PYPS 705 (752)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~ 705 (752)
... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||...... ......+..... ..+.
T Consensus 178 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~ 252 (327)
T 3aln_A 178 DSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV----FDQLTQVVKGDPPQLSN 252 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CCCCCSCCCCCCC
T ss_pred ccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH----HHHHHHHhcCCCCCCCC
Confidence 332 22334799999999998 4566899999999999999999999998632110 111111111111 1111
Q ss_pred hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 706 LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 706 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
......++.+.+++.+||+.||++|||++|++++
T Consensus 253 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 253 SEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred cccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 1112345678999999999999999999999875
No 288
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=7.9e-35 Score=309.13 Aligned_cols=229 Identities=21% Similarity=0.309 Sum_probs=162.4
Q ss_pred hhcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccCCceEEE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~~lV 551 (752)
..++|++.+.||+|+||.||+|+. .+|+.||||++...... +++...+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 357899999999999999999996 47999999988654221 345567889999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHh-CCCCCeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHN-NCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
|||+ ++.+..+..... ..+++..++.++.|++.||+|||+ . ||+||||||+||+++.++.+||+|||++....
T Consensus 103 ~e~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 103 MELM-GTCAEKLKKRMQ--GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp ECCC-SEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred Eecc-CCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 9999 446665554322 348899999999999999999998 6 89999999999999999999999999998764
Q ss_pred CCCCCcccccCCCCccCccccc-----cCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCC
Q 041438 631 LDSSNWSKLAGTHGNVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPS 705 (752)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (752)
... ......||+.|+|||++. +..++.++|||||||++|||++|+.||... .........+.....+...
T Consensus 177 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~----~~~~~~~~~~~~~~~~~~~ 251 (318)
T 2dyl_A 177 DDK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNC----KTDFEVLTKVLQEEPPLLP 251 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTC----CSHHHHHHHHHHSCCCCCC
T ss_pred CCc-cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCC----CccHHHHHHHhccCCCCCC
Confidence 332 233457999999999984 456889999999999999999999998521 1111222233332222111
Q ss_pred hhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 706 LDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 706 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.....+.++.+++.+||+.||++||+++|+++|
T Consensus 252 -~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 252 -GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp -SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred -ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 112345678899999999999999999999875
No 289
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.2e-34 Score=321.25 Aligned_cols=228 Identities=22% Similarity=0.341 Sum_probs=166.1
Q ss_pred cccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC----------------------CccccCCceEEEEEeccCC
Q 041438 501 NDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD----------------------NFCSHPRQSFIVYEYLESG 558 (752)
Q Consensus 501 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~~~~lV~E~~~~g 558 (752)
+.|.+.+.||+|+||+||.+...+|+.||||++...... +++.+.+..|+|||||. |
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g 93 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L 93 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence 345567889999999998777778999999987543211 33455678899999996 5
Q ss_pred ChHHHhccCccccc----cCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCC-------------CceEEe
Q 041438 559 SLDKILNNDASAKE----LGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLG-------------YEAHVS 621 (752)
Q Consensus 559 ~L~~~l~~~~~~~~----l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~-------------~~~kl~ 621 (752)
+|.+++........ .++..++.++.||+.||+|||+. +|+||||||+||+++.+ +.+||+
T Consensus 94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~ 170 (434)
T 2rio_A 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170 (434)
T ss_dssp EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence 99999986542111 13345678999999999999999 99999999999999654 489999
Q ss_pred ecccceeccCCCCC----cccccCCCCccCcccccc-------CCCCCccchhhHHHHHHHHHh-CCCCcchhhcccccc
Q 041438 622 DFRIAKFLNLDSSN----WSKLAGTHGNVAPELAYT-------MKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSS 689 (752)
Q Consensus 622 DfG~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~-------~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~ 689 (752)
|||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||+| |+.||.....
T Consensus 171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~----- 245 (434)
T 2rio_A 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS----- 245 (434)
T ss_dssp CCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT-----
T ss_pred ccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh-----
Confidence 99999987543321 223579999999999875 568999999999999999999 9999852111
Q ss_pred ccchHhhhccCCCCC---ChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 690 SNMNIEILDSRLPYP---SLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 690 ~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
....+.......+ .......+.++.+++.+||+.||++|||+.|+++|
T Consensus 246 --~~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 246 --RESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp --HHHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --hHHHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 1112222222211 11224567789999999999999999999999864
No 290
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.5e-34 Score=333.58 Aligned_cols=231 Identities=23% Similarity=0.320 Sum_probs=181.3
Q ss_pred hhcccccceeeccCCceEEEEEEeC----CCcEEEEEccCCCCCC-------------------------CccccCCceE
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVP----SGEIFAVKKFHSPLPD-------------------------NFCSHPRQSF 549 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~ 549 (752)
..++|++.+.||+|+||.||+|+.. .+..||||+++..... +++ ..+..|
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~-~~~~~~ 466 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVW 466 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSCE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-ecCceE
Confidence 4578999999999999999999853 3567999987653221 223 345689
Q ss_pred EEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 550 IVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 550 lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 467 lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp EEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred EEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 9999999999999997543 3488999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCC-cccccCCCCccCccccccCCCCCccchhhHHHHHHHHHh-CCCCcchhhccccccccchHhhhccC-CCCCCh
Q 041438 630 NLDSSN-WSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEILDSR-LPYPSL 706 (752)
Q Consensus 630 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 706 (752)
...... .....+|+.|+|||++.+..++.++|||||||++|||++ |..||... ........+.... .+.+
T Consensus 542 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~-----~~~~~~~~i~~~~~~~~~-- 614 (656)
T 2j0j_A 542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV-----KNNDVIGRIENGERLPMP-- 614 (656)
T ss_dssp CC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHHHHTCCCCCC--
T ss_pred CCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC-----CHHHHHHHHHcCCCCCCC--
Confidence 433221 223457789999999998899999999999999999997 99998521 1112222222222 2222
Q ss_pred hhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhh
Q 041438 707 DVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFH 744 (752)
Q Consensus 707 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 744 (752)
..+++.+.+++.+||+.||++|||++|+++.|+++.
T Consensus 615 --~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 615 --PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 244567899999999999999999999999999874
No 291
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.8e-34 Score=316.18 Aligned_cols=220 Identities=16% Similarity=0.073 Sum_probs=167.4
Q ss_pred hhcccccceeeccCCceEEEEEE-eCCCcEEEEEccCCCCCCC---------------cc--------------------
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIAR-VPSGEIFAVKKFHSPLPDN---------------FC-------------------- 542 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---------------~~-------------------- 542 (752)
....|...+.||+|+||.||+|+ ..+|+.||||+++...... ..
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 34568888999999999999999 5679999999887321110 00
Q ss_pred --------------cc-----CCceEEEEEeccCCChHHHhccC----ccccccCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 041438 543 --------------SH-----PRQSFIVYEYLESGSLDKILNND----ASAKELGWTQRLNVIKGVADALFYLHNNCFPP 599 (752)
Q Consensus 543 --------------~~-----~~~~~lV~E~~~~g~L~~~l~~~----~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ 599 (752)
.. ....+++|+++ +++|.+++... .....+++..+..++.||++||+|||++ +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 00 12356777766 46999988521 1234588899999999999999999999 9
Q ss_pred eeecCCCCCCEEeCCCCceEEeecccceeccCCCCCcccccCCCCccCcccc----------ccCCCCCccchhhHHHHH
Q 041438 600 IVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELA----------YTMKVTEKCDVYSFGVLA 669 (752)
Q Consensus 600 ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~ksDIwSlGvil 669 (752)
|+||||||+|||++.++.+||+|||+++..... ....+| +.|+|||++ .+..++.++|||||||++
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 999999999999999999999999999875433 334577 999999998 555688999999999999
Q ss_pred HHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 670 LEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 670 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
|||+||+.||.... .......+..... ..++++.+++.+||+.||++||++.|++++
T Consensus 308 ~elltg~~Pf~~~~-----~~~~~~~~~~~~~--------~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 308 YWIWCADLPNTDDA-----ALGGSEWIFRSCK--------NIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HHHHHSSCCCCTTG-----GGSCSGGGGSSCC--------CCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHCCCCCCCcc-----hhhhHHHHHhhcc--------cCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 99999999986322 1111222222111 223568899999999999999998887654
No 292
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.7e-34 Score=308.09 Aligned_cols=227 Identities=19% Similarity=0.270 Sum_probs=169.7
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------------CccccCC------
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------------NFCSHPR------ 546 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~------ 546 (752)
.++|++.+.||+|+||.||+|+. .+|+.||||++...... +++....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 46899999999999999999995 57999999998654322 1222222
Q ss_pred ceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccc
Q 041438 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIA 626 (752)
Q Consensus 547 ~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a 626 (752)
..|+||||+.+ +|.+++.. .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++
T Consensus 103 ~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 173 (353)
T 3coi_A 103 DFYLVMPFMQT-DLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 173 (353)
T ss_dssp CCEEEEECCSE-EGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred eEEEEeccccC-CHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccc
Confidence 35999999985 88887742 388899999999999999999999 9999999999999999999999999999
Q ss_pred eeccCCCCCcccccCCCCccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCcchhhccccc-----------------
Q 041438 627 KFLNLDSSNWSKLAGTHGNVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSS----------------- 688 (752)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~----------------- 688 (752)
+..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.........
T Consensus 174 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 174 RHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp TC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTT
T ss_pred cCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 865422 234578999999998877 67899999999999999999999998632110000
Q ss_pred -cccchHhhhccC-----CCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 689 -SSNMNIEILDSR-----LPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 689 -~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
............ .... ......++++.+++.+||+.||++|||++|+++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFT-QLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTT-TTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhHHHHHHHHhCcCCCCccHH-HhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000000000 0000 0112346678999999999999999999999976
No 293
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.3e-34 Score=328.09 Aligned_cols=233 Identities=27% Similarity=0.302 Sum_probs=175.0
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC-------------------------Ccc------ccCCc
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD-------------------------NFC------SHPRQ 547 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------~~~------~~~~~ 547 (752)
.++|++.+.||+|+||.||+|+. .+|+.||||+++..... +++ ...+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 47899999999999999999985 57999999998654211 111 22667
Q ss_pred eEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCc---eEEeecc
Q 041438 548 SFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYE---AHVSDFR 624 (752)
Q Consensus 548 ~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~---~kl~DfG 624 (752)
.++||||+++|+|.+++........+++..++.++.|++.||+|||+. ||+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 899999999999999998765445688999999999999999999999 9999999999999987665 9999999
Q ss_pred cceeccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhcc----ccc-----cccchHh
Q 041438 625 IAKFLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEM----SSS-----SSNMNIE 695 (752)
Q Consensus 625 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~----~~~-----~~~~~~~ 695 (752)
.+....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ... .......
T Consensus 170 ~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 170 YAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp CCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCC
T ss_pred ccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhh
Confidence 998765432 334468999999999999999999999999999999999999998521100 000 0000000
Q ss_pred hh------ccCCCCCChhhHHHHHHHHHHHHhccCcCCCCCCCHHHH
Q 041438 696 IL------DSRLPYPSLDVQNKFMSIMQVAFSCLDQNPVSRPTMKRF 736 (752)
Q Consensus 696 ~~------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 736 (752)
.. ....+.+.......++.+.+++.+||+.||++|||++|+
T Consensus 249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 01 111122222234567889999999999999999999884
No 294
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=3e-36 Score=337.40 Aligned_cols=354 Identities=19% Similarity=0.150 Sum_probs=288.3
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccc----cCCccCcCCCCCCeeecCCCcccccCCcccc-ccc--
Q 041438 85 RVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFD----IIPPQISNLSKLEYLDFLTNKLSGHIPSEIS-LLT-- 157 (752)
Q Consensus 85 ~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~-- 157 (752)
+++.++|+++.+........|..+++|++|+|++|++++ .++..+..+++|++|+|++|.++...+..+. .++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 467888888887755444447889999999999999985 3567788999999999999999875554443 455
Q ss_pred --ccceeeccCcccCC----CCCcccCCCCCCcEEEccCCCCCCcCCcCcc-----CCCcceEEeeccccccccc----c
Q 041438 158 --HLTILHISRNQLNG----SIPHEVGQLNFLNHLILDSNFLGGSIPRSLS-----NFTNLVFLYLYNNSFSGSI----P 222 (752)
Q Consensus 158 --~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~~----p 222 (752)
+|++|+|++|+|+. .++..+..+++|++|+|++|++++..+..+. ..++|++|+|++|++++.. +
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 163 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 163 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHH
Confidence 79999999999984 5688899999999999999999865554433 3568999999999998744 6
Q ss_pred ccccCccccccccccccccCCCcCCCCC---CCCCCCCcEEEccccccCCC----CCcccCCCCCCCEEecCCCcCcCCC
Q 041438 223 QQIGNLKSLFDMKLCINQLNGAIPLSID---WGRCPQLSLLDVSINNITGN----IPFEIGESPQLQYLDLSSNYIVGEI 295 (752)
Q Consensus 223 ~~~~~l~~L~~l~l~~N~l~~~~~~~~~---~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~ 295 (752)
..+..+++|++|++++|.+++..+..+. ....++|++|++++|.+++. ++..+..+++|++|+|++|.+++..
T Consensus 164 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 243 (461)
T 1z7x_W 164 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG 243 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHH
Confidence 6677789999999999998754332211 01256899999999999874 5777788999999999999987643
Q ss_pred -----CccccCCcccCEEEccCCcCccc----CCcccCCCcccceeeccccccccccchhhccc-----ccccEEEcCCC
Q 041438 296 -----PTQLGNIIYLNRISLSGNKLSGR----IPGELGSLINLEYLDLSANHLSNFVLESLGSL-----VKLYYLNLSHN 361 (752)
Q Consensus 296 -----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-----~~L~~L~Ls~N 361 (752)
+..+..+++|+.|++++|.++.. ++..+..+++|++|+|++|.+++..+..+... ++|++|+|++|
T Consensus 244 ~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n 323 (461)
T 1z7x_W 244 MAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSC 323 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCC
Confidence 33344688999999999999864 56777889999999999999988766666543 79999999999
Q ss_pred cCccc----cchhccccccCCeeecCCccCCCCCCccccc-----ccccceEEccCCcCCc----CCchhhhccCCCcEE
Q 041438 362 KLSQQ----IPIELDNLIHLSELDLSHNFLGEKISSRICR-----MESLEKLNLSYNNLSG----LIPRCFEELHGLLHI 428 (752)
Q Consensus 362 ~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L 428 (752)
.+++. ++..+..+++|++|+|++|.+++..+..++. .++|++|+|++|++++ .+|..+..+++|++|
T Consensus 324 ~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L 403 (461)
T 1z7x_W 324 SFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLREL 403 (461)
T ss_dssp CCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEE
T ss_pred CCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEE
Confidence 99876 5677788899999999999998776665554 6799999999999996 778889999999999
Q ss_pred EccCCcccCc
Q 041438 429 DISYNKLEGH 438 (752)
Q Consensus 429 ~ls~N~l~~~ 438 (752)
++++|++++.
T Consensus 404 ~l~~N~i~~~ 413 (461)
T 1z7x_W 404 DLSNNCLGDA 413 (461)
T ss_dssp ECCSSSCCHH
T ss_pred ECCCCCCCHH
Confidence 9999998753
No 295
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.3e-33 Score=295.34 Aligned_cols=213 Identities=22% Similarity=0.330 Sum_probs=163.4
Q ss_pred hcccccc-eeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC--------------------Ccccc----CCceEEEEE
Q 041438 500 TNDFDAK-HCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD--------------------NFCSH----PRQSFIVYE 553 (752)
Q Consensus 500 ~~~y~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------~~~~~----~~~~~lV~E 553 (752)
.++|.+. +.||+|+||.||+|+. .+++.||||+++..... +++.. ....++|||
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 95 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME 95 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEC
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecccHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEe
Confidence 4677777 7899999999999995 67899999988542110 22222 567899999
Q ss_pred eccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCC---CCceEEeecccceecc
Q 041438 554 YLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDL---GYEAHVSDFRIAKFLN 630 (752)
Q Consensus 554 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~---~~~~kl~DfG~a~~~~ 630 (752)
|+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++....
T Consensus 96 ~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 171 (299)
T 3m2w_A 96 CLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171 (299)
T ss_dssp CCCSCBHHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT
T ss_pred ecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccccccc
Confidence 9999999999986542 3589999999999999999999999 9999999999999997 7889999999987542
Q ss_pred CCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHH
Q 041438 631 LDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQN 710 (752)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (752)
+..++.++||||+||++|||++|+.||........ .......+.......+......
T Consensus 172 ----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 228 (299)
T 3m2w_A 172 ----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-SPGMKTRIRMGQYEFPNPEWSE 228 (299)
T ss_dssp ----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------CCSCCSSCTTCCSSCHHHHTT
T ss_pred ----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-hHHHHHHHhhccccCCchhccc
Confidence 13467899999999999999999999853221110 0111112222223333323345
Q ss_pred HHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 041438 711 KFMSIMQVAFSCLDQNPVSRPTMKRFEVQ 739 (752)
Q Consensus 711 ~~~~l~~li~~cl~~dP~~Rps~~evl~~ 739 (752)
.++++.+++.+||+.||++|||++|+++|
T Consensus 229 ~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 229 VSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 56789999999999999999999999986
No 296
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.98 E-value=1.7e-32 Score=289.64 Aligned_cols=252 Identities=23% Similarity=0.265 Sum_probs=154.3
Q ss_pred CCCcccceeeCCCCCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCccccc--
Q 041438 71 SLCTWSGIHCNHAGRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGH-- 148 (752)
Q Consensus 71 ~~c~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-- 148 (752)
..|.|.++.|...+ + + .++. .-.++|++|+|++|+++++.+..|+++++|++|+|++|+++..
T Consensus 5 C~C~~~~l~c~~~~-l-----~------~ip~---~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 69 (306)
T 2z66_A 5 CSCSGTEIRCNSKG-L-----T------SVPT---GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGC 69 (306)
T ss_dssp CEEETTEEECCSSC-C-----S------SCCS---CCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEE
T ss_pred CeeCCCEEEcCCCC-c-----c------cCCC---CCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccC
Confidence 34899999997533 1 1 1111 1236788999999999887777788899999999999988743
Q ss_pred CCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCC-cCccCCCcceEEeeccccccccccccccC
Q 041438 149 IPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIP-RSLSNFTNLVFLYLYNNSFSGSIPQQIGN 227 (752)
Q Consensus 149 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 227 (752)
.|..+..+++|++|+|++|.++ .+|..+..+++|++|+|++|++++..+ ..|.++++|++|+|++|.+++..+..|.+
T Consensus 70 ~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 148 (306)
T 2z66_A 70 CSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 148 (306)
T ss_dssp EEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTT
T ss_pred cccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhccc
Confidence 3566777888888888888887 456667778888888888888776554 56777777777777777777665555544
Q ss_pred ccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCC-CCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccC
Q 041438 228 LKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITG-NIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLN 306 (752)
Q Consensus 228 l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 306 (752)
+++| ++|++++|.+++ ..|..+..+++|++|+|++|.+++..|..|..+++|+
T Consensus 149 l~~L--------------------------~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 202 (306)
T 2z66_A 149 LSSL--------------------------EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 202 (306)
T ss_dssp CTTC--------------------------CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CcCC--------------------------CEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCC
Confidence 4433 344444444443 3344444455555555555555444444444444444
Q ss_pred EEEccCCcCcccCCcccCCCcccceeeccccccccccchhhcccc-cccEEEcCCCcCc
Q 041438 307 RISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLV-KLYYLNLSHNKLS 364 (752)
Q Consensus 307 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~ 364 (752)
.|+|++|++++..+..+..+++|++|+|++|++++..+..+..++ +|++|+|++|.++
T Consensus 203 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~ 261 (306)
T 2z66_A 203 VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261 (306)
T ss_dssp EEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEE
T ss_pred EEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCee
Confidence 444444444444444444444444444444444444444444442 4444444444443
No 297
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.98 E-value=8.8e-33 Score=288.63 Aligned_cols=209 Identities=11% Similarity=-0.002 Sum_probs=160.9
Q ss_pred hcccccceeeccCCceEEEEEEe-CCCcEEEEEccCCCCCC---------------------------CccccCCceEEE
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARV-PSGEIFAVKKFHSPLPD---------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------------------------~~~~~~~~~~lV 551 (752)
.++|++.+.||+|+||.||+|+. .+++.||||+++..... +++.+.+..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 46799999999999999999996 45899999999765332 344566789999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
|||+++++|.+++... ....++..++.|++.||+|||++ ||+||||||+||+++.++.+||+++
T Consensus 110 ~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~-------- 173 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYP-------- 173 (286)
T ss_dssp EECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSC--------
T ss_pred EEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEec--------
Confidence 9999999999999542 24457889999999999999999 9999999999999999999998843
Q ss_pred CCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChhhHHH
Q 041438 632 DSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLDVQNK 711 (752)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (752)
.|++| ++.++|||||||++|||+||+.||......... .............+.......
T Consensus 174 ------------~~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T 3uqc_A 174 ------------ATMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGL--APAERDTAGQPIEPADIDRDI 232 (286)
T ss_dssp ------------CCCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCS--EECCBCTTSCBCCHHHHCTTS
T ss_pred ------------cccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhh--HHHHHHhccCCCChhhcccCC
Confidence 34443 688999999999999999999998632211000 001111111111111112345
Q ss_pred HHHHHHHHHhccCcCCCCCCCHHHHHHHHhhhhcC
Q 041438 712 FMSIMQVAFSCLDQNPVSRPTMKRFEVQSKQFHYN 746 (752)
Q Consensus 712 ~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 746 (752)
++++.+++.+||+.||++| |++|+++.|+++...
T Consensus 233 ~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 233 PFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp CHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 6678999999999999999 999999999987644
No 298
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.98 E-value=2.2e-32 Score=294.93 Aligned_cols=286 Identities=21% Similarity=0.187 Sum_probs=192.5
Q ss_pred CCCcccceeeCCCCCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCC
Q 041438 71 SLCTWSGIHCNHAGRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIP 150 (752)
Q Consensus 71 ~~c~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 150 (752)
.+|.|.|+ |+. +++++. .++. . -.++|++|+|++|+|+++.+..|.++++|++|+|++|++++..|
T Consensus 28 ~~C~~~~~-c~~---------~~~~l~-~iP~-~--~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 93 (353)
T 2z80_A 28 LSCDRNGI-CKG---------SSGSLN-SIPS-G--LTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEE 93 (353)
T ss_dssp CEECTTSE-EEC---------CSTTCS-SCCT-T--CCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECT
T ss_pred CCCCCCeE-eeC---------CCCCcc-cccc-c--ccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCH
Confidence 67999988 752 222222 1222 1 22589999999999998888889999999999999999998888
Q ss_pred cccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCC-cCccCCCcceEEeeccc-cccccccccccCc
Q 041438 151 SEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIP-RSLSNFTNLVFLYLYNN-SFSGSIPQQIGNL 228 (752)
Q Consensus 151 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l 228 (752)
..|.++++|++|+|++|+|++..+..|+++++|++|+|++|++++..+ ..|.++++|++|++++| .+.+..+..|+++
T Consensus 94 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l 173 (353)
T 2z80_A 94 DSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGL 173 (353)
T ss_dssp TTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC
T ss_pred hhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCC
Confidence 889999999999999999997666668899999999999999986555 57888999999999988 4665555555555
Q ss_pred cccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEE
Q 041438 229 KSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRI 308 (752)
Q Consensus 229 ~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 308 (752)
++ |++|++++|++++..|..+..+++|++|++++|.++...+..+..+++|+.|
T Consensus 174 ~~--------------------------L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L 227 (353)
T 2z80_A 174 TF--------------------------LEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECL 227 (353)
T ss_dssp CE--------------------------EEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEE
T ss_pred CC--------------------------CCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEE
Confidence 44 4466666666666666666667777777777777654333344456667777
Q ss_pred EccCCcCcccCCcccC---CCcccceeeccccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCc
Q 041438 309 SLSGNKLSGRIPGELG---SLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHN 385 (752)
Q Consensus 309 ~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 385 (752)
++++|++++..+..+. ....++.++|++|.+++. .+. .+|..+..+++|++|+|++|
T Consensus 228 ~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~-------------------~l~-~l~~~l~~l~~L~~L~Ls~N 287 (353)
T 2z80_A 228 ELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE-------------------SLF-QVMKLLNQISGLLELEFSRN 287 (353)
T ss_dssp EEESCBCTTCCCC------CCCCCCEEEEESCBCCHH-------------------HHH-HHHHHHHTCTTCCEEECCSS
T ss_pred ECCCCccccccccccccccccchhhccccccccccCc-------------------chh-hhHHHHhcccCCCEEECCCC
Confidence 7777766654443322 223344444444444331 110 24455566666666666666
Q ss_pred cCCCCCCcccccccccceEEccCCcCCcCCc
Q 041438 386 FLGEKISSRICRMESLEKLNLSYNNLSGLIP 416 (752)
Q Consensus 386 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 416 (752)
+++...+..|..+++|++|+|++|++++..|
T Consensus 288 ~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 288 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 6664444445666677777777777766544
No 299
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=4.5e-32 Score=292.55 Aligned_cols=280 Identities=18% Similarity=0.214 Sum_probs=180.3
Q ss_pred CCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEc
Q 041438 109 PHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLIL 188 (752)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 188 (752)
+.....++++|+++.+ |..+. ++|++|+|++|+++++.+..|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 31 ~~~~~c~~~~~~l~~i-P~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 31 DRNGICKGSSGSLNSI-PSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp CTTSEEECCSTTCSSC-CTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCeEeeCCCCCcccc-ccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 3344456666666553 33332 25555555555555554445555555555555555555544555555555555555
Q ss_pred cCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccC
Q 041438 189 DSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNIT 268 (752)
Q Consensus 189 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 268 (752)
++|++++..+..|.++++|++|+|++|+++
T Consensus 108 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-------------------------------------------------- 137 (353)
T 2z80_A 108 SYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-------------------------------------------------- 137 (353)
T ss_dssp CSSCCSSCCHHHHTTCTTCSEEECTTCCCS--------------------------------------------------
T ss_pred CCCcCCcCCHhHhCCCccCCEEECCCCCCc--------------------------------------------------
Confidence 555555443333444455555555444444
Q ss_pred CCCC-cccCCCCCCCEEecCCC-cCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchh
Q 041438 269 GNIP-FEIGESPQLQYLDLSSN-YIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLES 346 (752)
Q Consensus 269 ~~~p-~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 346 (752)
+..+ ..+..+++|++|++++| .+.+..+..|.++++|+.|++++|++++..|..+..+++|++|++++|.++..+...
T Consensus 138 ~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~ 217 (353)
T 2z80_A 138 TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIF 217 (353)
T ss_dssp SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHH
T ss_pred ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhh
Confidence 2222 23444555555555555 344444556666777777777777777777777777778888888888877766666
Q ss_pred hcccccccEEEcCCCcCccccchhcc---ccccCCeeecCCccCCC----CCCcccccccccceEEccCCcCCcCCchhh
Q 041438 347 LGSLVKLYYLNLSHNKLSQQIPIELD---NLIHLSELDLSHNFLGE----KISSRICRMESLEKLNLSYNNLSGLIPRCF 419 (752)
Q Consensus 347 ~~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 419 (752)
+..+++|+.|++++|++++..+..+. ....++.++|++|.+++ .+|..+..+++|+.|+|++|+++.+++..|
T Consensus 218 ~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~ 297 (353)
T 2z80_A 218 VDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIF 297 (353)
T ss_dssp HHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTT
T ss_pred hhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHH
Confidence 66778888888888888766554433 35667788888888766 367778899999999999999997766667
Q ss_pred hccCCCcEEEccCCcccCcCCC
Q 041438 420 EELHGLLHIDISYNKLEGHIPN 441 (752)
Q Consensus 420 ~~l~~L~~L~ls~N~l~~~~p~ 441 (752)
..+++|++|++++|++.+..|.
T Consensus 298 ~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 298 DRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp TTCTTCCEEECCSSCBCCCHHH
T ss_pred hcCCCCCEEEeeCCCccCcCCC
Confidence 9999999999999999987763
No 300
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=1.9e-32 Score=293.39 Aligned_cols=217 Identities=15% Similarity=0.139 Sum_probs=168.7
Q ss_pred hcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC---------------------Cc-----------------
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD---------------------NF----------------- 541 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------~~----------------- 541 (752)
.++|++.+.||+|+||.||+|+. +|+.||||+++..... ..
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46899999999999999999988 7899999998754210 00
Q ss_pred --------------------c-------------ccCCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHH
Q 041438 542 --------------------C-------------SHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADA 588 (752)
Q Consensus 542 --------------------~-------------~~~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~a 588 (752)
+ ......|+|||||++|++.+.+.+ ..+++..++.++.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 0 026789999999999976666643 237899999999999999
Q ss_pred HHHHH-hCCCCCeeecCCCCCCEEeCCCC--------------------ceEEeecccceeccCCCCCcccccCCCCccC
Q 041438 589 LFYLH-NNCFPPIVHWDISSKNVLLDLGY--------------------EAHVSDFRIAKFLNLDSSNWSKLAGTHGNVA 647 (752)
Q Consensus 589 L~~lH-~~~~~~ivH~DlKp~NIll~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~a 647 (752)
|+||| +. +|+||||||+|||++.++ .+||+|||+|+..... ..+||+.|+|
T Consensus 174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~a 245 (336)
T 2vuw_A 174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMD 245 (336)
T ss_dssp HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTC
T ss_pred HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccC
Confidence 99999 89 999999999999999887 8999999999876532 3489999999
Q ss_pred ccccccCCCCCccchhhHHHH-HHHHHhCCCCcchhhccccccccchHhhh---ccCCCCCChhhHHHHHHHHHHHHhcc
Q 041438 648 PELAYTMKVTEKCDVYSFGVL-ALEVIKGKHPRDFLFEMSSSSSNMNIEIL---DSRLPYPSLDVQNKFMSIMQVAFSCL 723 (752)
Q Consensus 648 PE~~~~~~~~~ksDIwSlGvi-l~elltg~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl 723 (752)
||++.+.. +.++||||+|++ .+++++|..||....+... ....+. ......+.......++++.++|.+||
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHY----LTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHH----HHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGG
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhH----HHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHh
Confidence 99998776 889999998777 7788899999853211100 111111 11112223334678889999999999
Q ss_pred CcCCCCCCCHHHHH-HH
Q 041438 724 DQNPVSRPTMKRFE-VQ 739 (752)
Q Consensus 724 ~~dP~~Rps~~evl-~~ 739 (752)
++| |++|++ +|
T Consensus 321 ~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 321 NFS-----SATDLLCQH 332 (336)
T ss_dssp GSS-----SHHHHHHHC
T ss_pred ccC-----CHHHHHhcC
Confidence 976 999988 54
No 301
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=4.7e-32 Score=317.45 Aligned_cols=215 Identities=25% Similarity=0.342 Sum_probs=167.6
Q ss_pred hcccccceeeccCCceEEEEEEeC--CCcEEEEEccCCCCCC-------------------------CccccCCc-----
Q 041438 500 TNDFDAKHCIGKGGHGSVYIARVP--SGEIFAVKKFHSPLPD-------------------------NFCSHPRQ----- 547 (752)
Q Consensus 500 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~-------------------------~~~~~~~~----- 547 (752)
.++|++.+.||+|+||.||+|+.. +|+.||||++...... +++.+.+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 478999999999999999999964 6899999988643211 22333333
Q ss_pred eEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccce
Q 041438 548 SFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAK 627 (752)
Q Consensus 548 ~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~ 627 (752)
.|+||||+++++|.+++.. .+++.+++.|+.||+.||.|||++ ||+||||||+||+++.+ .+||+|||+++
T Consensus 159 ~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp EEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred eEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccch
Confidence 6999999999999987753 488999999999999999999999 99999999999999975 89999999998
Q ss_pred eccCCCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCcchhhccccccccchHhhhccCCCCCChh
Q 041438 628 FLNLDSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEILDSRLPYPSLD 707 (752)
Q Consensus 628 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (752)
..... ....||+.|+|||++.+.. +.++|||||||++|+|++|..||..... . ..+. ...
T Consensus 230 ~~~~~----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~-----~---------~~~~-~~~ 289 (681)
T 2pzi_A 230 RINSF----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV-----D---------GLPE-DDP 289 (681)
T ss_dssp ETTCC----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC-----S---------SCCT-TCH
T ss_pred hcccC----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc-----c---------cccc-ccc
Confidence 76533 3457999999999887654 8899999999999999999998752110 0 0111 112
Q ss_pred hHHHHHHHHHHHHhccCcCCCCCCC-HHHHHHHHhhh
Q 041438 708 VQNKFMSIMQVAFSCLDQNPVSRPT-MKRFEVQSKQF 743 (752)
Q Consensus 708 ~~~~~~~l~~li~~cl~~dP~~Rps-~~evl~~L~~~ 743 (752)
....++.+.++|.+||++||++||+ ++++...+..+
T Consensus 290 ~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 290 VLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp HHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 2344567899999999999999995 55566655543
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.2e-31 Score=283.12 Aligned_cols=248 Identities=21% Similarity=0.172 Sum_probs=145.0
Q ss_pred EEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCC--CCcccCCCCCCcEEEccC
Q 041438 113 YLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGS--IPHEVGQLNFLNHLILDS 190 (752)
Q Consensus 113 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~ 190 (752)
.++.++++++.+ |..+. ++|++|+|++|+++.+.+..|.++++|++|+|++|.++.. .|..+..+++|++|+|++
T Consensus 11 ~l~c~~~~l~~i-p~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLTSV-PTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCSSC-CSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCcccC-CCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 456666666653 33332 4666667777666655445566666666666666666522 244445555666666666
Q ss_pred CCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCC
Q 041438 191 NFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGN 270 (752)
Q Consensus 191 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 270 (752)
|.++. +|..+.++++|++|+|++|++++..+. ..+..+++|++|++++|.+++.
T Consensus 88 n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~-------------------------~~~~~l~~L~~L~l~~n~l~~~ 141 (306)
T 2z66_A 88 NGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEF-------------------------SVFLSLRNLIYLDISHTHTRVA 141 (306)
T ss_dssp CSEEE-EEEEEETCTTCCEEECTTSEEESSTTT-------------------------TTTTTCTTCCEEECTTSCCEEC
T ss_pred Ccccc-ChhhcCCCCCCCEEECCCCcccccccc-------------------------hhhhhccCCCEEECCCCcCCcc
Confidence 65553 344455555555555555555432220 0133455666666666666666
Q ss_pred CCcccCCCCCCCEEecCCCcCcC-CCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhcc
Q 041438 271 IPFEIGESPQLQYLDLSSNYIVG-EIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGS 349 (752)
Q Consensus 271 ~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 349 (752)
.+..+..+++|++|+|++|.+++ ..|..+..+++|+.|++++|++++..|..|..+++|++|+|++|.+++..+..|..
T Consensus 142 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 221 (306)
T 2z66_A 142 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 221 (306)
T ss_dssp STTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTT
T ss_pred chhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccC
Confidence 66666666777777777776665 45666666666666666666666655666666666666666666666655555555
Q ss_pred cccccEEEcCCCcCccccchhccccc-cCCeeecCCccCCC
Q 041438 350 LVKLYYLNLSHNKLSQQIPIELDNLI-HLSELDLSHNFLGE 389 (752)
Q Consensus 350 l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~ 389 (752)
+++|++|+|++|++++..|..+..++ +|++|+|++|.+++
T Consensus 222 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 222 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred cccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 66666666666666555555555552 55555555555543
No 303
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.97 E-value=1.6e-32 Score=290.65 Aligned_cols=250 Identities=22% Similarity=0.166 Sum_probs=155.2
Q ss_pred cCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcc-cccCCcccc-------cccccceeeccCcccCCCCCcc
Q 041438 105 FSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKL-SGHIPSEIS-------LLTHLTILHISRNQLNGSIPHE 176 (752)
Q Consensus 105 f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~ 176 (752)
++..++|++|++++|++ .+|..+... |++|+|++|++ .+.+|..+. ++++|++|+|++|+|++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45566788888888888 566665544 88888888888 445666555 6888888888888888888887
Q ss_pred c--CCCCCCcEEEccCCCCCCcCCcCccCC-----CcceEEeeccccccccccccccCccccccccccccccCCCc--CC
Q 041438 177 V--GQLNFLNHLILDSNFLGGSIPRSLSNF-----TNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAI--PL 247 (752)
Q Consensus 177 ~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~--~~ 247 (752)
+ ..+++|++|+|++|++++. |..+.++ ++|++|+|++|++++..|..|+++++|++|++++|++.+.+ +.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 6 7888888888888888877 7777777 88888888888888777777777777776666666655432 22
Q ss_pred CCCCCCCCCCcEEEccccccCCC--CC-cccCCCCCCCEEecCCCcCcCCCC-ccccCCcccCEEEccCCcCcccCCccc
Q 041438 248 SIDWGRCPQLSLLDVSINNITGN--IP-FEIGESPQLQYLDLSSNYIVGEIP-TQLGNIIYLNRISLSGNKLSGRIPGEL 323 (752)
Q Consensus 248 ~~~~~~l~~L~~L~Ls~N~l~~~--~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 323 (752)
.+.++.+++|++|++++|+|++. ++ ..+..+++|++|+|++|++++..| ..+..+++|+.|+|++|+|+ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 22334555555555555555521 11 222344555555555555554443 23334445555555555554 333333
Q ss_pred CCCcccceeeccccccccccchhhcccccccEEEcCCCcCc
Q 041438 324 GSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLS 364 (752)
Q Consensus 324 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 364 (752)
. ++|++|+|++|+|++. |. +..+++|++|+|++|+++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 3 4444444444444443 22 444444444444444443
No 304
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=2.4e-34 Score=321.97 Aligned_cols=351 Identities=20% Similarity=0.130 Sum_probs=278.6
Q ss_pred CCCCCEEECCCCcccccCCcc-CcCCCCCCeeecCCCcccc----cCCcccccccccceeeccCcccCCCCCccc-CCCC
Q 041438 108 FPHLAYLDLYNNELFDIIPPQ-ISNLSKLEYLDFLTNKLSG----HIPSEISLLTHLTILHISRNQLNGSIPHEV-GQLN 181 (752)
Q Consensus 108 l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~ 181 (752)
.++|++|||++|+++...... |..+++|++|+|++|+++. .++..+..+++|++|+|++|.++...+..+ ..++
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 357899999999998765444 8899999999999999985 346678888999999999999986544333 3344
Q ss_pred ----CCcEEEccCCCCCC----cCCcCccCCCcceEEeecccccccccccccc-----CccccccccccccccCCCcCCC
Q 041438 182 ----FLNHLILDSNFLGG----SIPRSLSNFTNLVFLYLYNNSFSGSIPQQIG-----NLKSLFDMKLCINQLNGAIPLS 248 (752)
Q Consensus 182 ----~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~l~l~~N~l~~~~~~~ 248 (752)
+|++|+|++|+++. .+|..|..+++|++|+|++|.+++..+..+. ..++|++|++++|++++.....
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 79999999999994 5688999999999999999999876555443 3567999999999998643211
Q ss_pred C--CCCCCCCCcEEEccccccCCCCCcccC-----CCCCCCEEecCCCcCcCC----CCccccCCcccCEEEccCCcCcc
Q 041438 249 I--DWGRCPQLSLLDVSINNITGNIPFEIG-----ESPQLQYLDLSSNYIVGE----IPTQLGNIIYLNRISLSGNKLSG 317 (752)
Q Consensus 249 ~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~ 317 (752)
+ .+..+++|++|++++|.++...+..+. ..++|++|+|++|.+++. ++..+..+++|++|++++|.+++
T Consensus 162 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 241 (461)
T 1z7x_W 162 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCCh
Confidence 1 234578999999999999865554443 367999999999999874 57778889999999999999975
Q ss_pred cC-----CcccCCCcccceeeccccccccc----cchhhcccccccEEEcCCCcCccccchhcccc-----ccCCeeecC
Q 041438 318 RI-----PGELGSLINLEYLDLSANHLSNF----VLESLGSLVKLYYLNLSHNKLSQQIPIELDNL-----IHLSELDLS 383 (752)
Q Consensus 318 ~~-----p~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls 383 (752)
.. +..+..+++|++|+|++|.+++. .+..+..+++|++|+|++|.+++..+..+... ++|++|+|+
T Consensus 242 ~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 321 (461)
T 1z7x_W 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcC
Confidence 42 33345689999999999999986 46677889999999999999987666555543 799999999
Q ss_pred CccCCCC----CCcccccccccceEEccCCcCCcCCchhhhc-----cCCCcEEEccCCcccC----cCCCC-cccCCCC
Q 041438 384 HNFLGEK----ISSRICRMESLEKLNLSYNNLSGLIPRCFEE-----LHGLLHIDISYNKLEG----HIPNS-TTFRDAP 449 (752)
Q Consensus 384 ~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~ls~N~l~~----~~p~~-~~~~~~~ 449 (752)
+|.+++. ++..+..+++|++|+|++|++++..+..+.. .++|++|++++|++++ .+|.. .....+.
T Consensus 322 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~ 401 (461)
T 1z7x_W 322 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLR 401 (461)
T ss_dssp TSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCC
T ss_pred CCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCcc
Confidence 9999876 4566777899999999999999876666653 6799999999999985 44432 1234445
Q ss_pred cccccCCCC
Q 041438 450 LEALQGNKG 458 (752)
Q Consensus 450 ~~~~~~n~~ 458 (752)
...+.+|+-
T Consensus 402 ~L~l~~N~i 410 (461)
T 1z7x_W 402 ELDLSNNCL 410 (461)
T ss_dssp EEECCSSSC
T ss_pred EEECCCCCC
Confidence 566677753
No 305
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=4.1e-30 Score=286.78 Aligned_cols=228 Identities=21% Similarity=0.213 Sum_probs=175.4
Q ss_pred CCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEc
Q 041438 109 PHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLIL 188 (752)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 188 (752)
++|++|+|++|+|+++.|..|.++++|++|+|++|+|+++.|..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 68999999999999999999999999999999999999999899999999999999999999888888999999999999
Q ss_pred cCCCCCCcCCcCccCCCcceEEeeccc-cccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEcccccc
Q 041438 189 DSNFLGGSIPRSLSNFTNLVFLYLYNN-SFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNI 267 (752)
Q Consensus 189 ~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l 267 (752)
++|+|+...+..|.++++|++|+|++| .+....+..|.++++ |+.|+|++|++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~--------------------------L~~L~L~~n~l 208 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFN--------------------------LKYLNLGMCNI 208 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTT--------------------------CCEEECTTSCC
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCC--------------------------CCEEECCCCcc
Confidence 999999888888999999999999984 444443344555554 45555555555
Q ss_pred CCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhh
Q 041438 268 TGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESL 347 (752)
Q Consensus 268 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 347 (752)
++. | .+..+++|++|+|++|.|++..|..|.++++|+.|+|++|++++..+..|.++++|++|+|++|+|+++++..|
T Consensus 209 ~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 286 (452)
T 3zyi_A 209 KDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLF 286 (452)
T ss_dssp SSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSS
T ss_pred ccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHh
Confidence 543 2 35556666666666666666666666666666666666666666666666667777777777777776666666
Q ss_pred cccccccEEEcCCCcCc
Q 041438 348 GSLVKLYYLNLSHNKLS 364 (752)
Q Consensus 348 ~~l~~L~~L~Ls~N~l~ 364 (752)
..+++|+.|+|++|.+.
T Consensus 287 ~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 287 TPLRYLVELHLHHNPWN 303 (452)
T ss_dssp TTCTTCCEEECCSSCEE
T ss_pred ccccCCCEEEccCCCcC
Confidence 66777777777777664
No 306
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=1.9e-30 Score=271.02 Aligned_cols=206 Identities=25% Similarity=0.228 Sum_probs=104.2
Q ss_pred CCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcc-cCCCCCcccCCCCCCcEEE
Q 041438 109 PHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQ-LNGSIPHEVGQLNFLNHLI 187 (752)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~ 187 (752)
++|++|+|++|+|+++.+..|.++++|++|+|++|+++++.|..|.++++|++|+|++|. ++...|..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 455555555555555555555555555555555555555555555555555555555554 4444455555555555555
Q ss_pred ccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEcccccc
Q 041438 188 LDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNI 267 (752)
Q Consensus 188 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l 267 (752)
|++|++++..|..|.++++|++|+|++|++++.
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~----------------------------------------------- 144 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQAL----------------------------------------------- 144 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCC-----------------------------------------------
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCccccc-----------------------------------------------
Confidence 555555544444455555555555555444432
Q ss_pred CCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhh
Q 041438 268 TGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESL 347 (752)
Q Consensus 268 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 347 (752)
.+..+..+++|++|+|++|.+++..+..|.++++|+.|++++|++++..|..|..+++|++|+|++|.++++++..|
T Consensus 145 ---~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 221 (285)
T 1ozn_A 145 ---PDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEAL 221 (285)
T ss_dssp ---CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHH
T ss_pred ---CHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHc
Confidence 22333334444444444444443333334444444444444444444444444455555555555555555444445
Q ss_pred cccccccEEEcCCCcCc
Q 041438 348 GSLVKLYYLNLSHNKLS 364 (752)
Q Consensus 348 ~~l~~L~~L~Ls~N~l~ 364 (752)
..+++|++|+|++|.+.
T Consensus 222 ~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 222 APLRALQYLRLNDNPWV 238 (285)
T ss_dssp TTCTTCCEEECCSSCEE
T ss_pred ccCcccCEEeccCCCcc
Confidence 55555555555555554
No 307
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=4.7e-30 Score=286.27 Aligned_cols=235 Identities=26% Similarity=0.306 Sum_probs=209.0
Q ss_pred CCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCC
Q 041438 125 IPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNF 204 (752)
Q Consensus 125 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 204 (752)
+|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++
T Consensus 69 iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 146 (452)
T 3zyi_A 69 VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYL 146 (452)
T ss_dssp CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSC
T ss_pred cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhccc
Confidence 344443 689999999999999999999999999999999999999989999999999999999999998888889999
Q ss_pred CcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccc-cccCCCCCcccCCCCCCCE
Q 041438 205 TNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSI-NNITGNIPFEIGESPQLQY 283 (752)
Q Consensus 205 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~ 283 (752)
++|++|+|++|+|++..+..|.++ ++|+.|++++ |.+....+..|..+++|++
T Consensus 147 ~~L~~L~L~~N~l~~~~~~~~~~l--------------------------~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~ 200 (452)
T 3zyi_A 147 SKLRELWLRNNPIESIPSYAFNRV--------------------------PSLMRLDLGELKKLEYISEGAFEGLFNLKY 200 (452)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTC--------------------------TTCCEEECCCCTTCCEECTTTTTTCTTCCE
T ss_pred CCCCEEECCCCCcceeCHhHHhcC--------------------------CcccEEeCCCCCCccccChhhccCCCCCCE
Confidence 999999999999986665555544 4556777776 3444444557889999999
Q ss_pred EecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhcccccccEEEcCCCcC
Q 041438 284 LDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKL 363 (752)
Q Consensus 284 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 363 (752)
|+|++|.+++. | .+..+++|+.|+|++|++++..|..|.++++|++|+|++|+++++.+..|.++++|+.|+|++|+|
T Consensus 201 L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 278 (452)
T 3zyi_A 201 LNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNL 278 (452)
T ss_dssp EECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcC
Confidence 99999999865 4 588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhccccccCCeeecCCccCCC
Q 041438 364 SQQIPIELDNLIHLSELDLSHNFLGE 389 (752)
Q Consensus 364 ~~~~p~~~~~l~~L~~L~Ls~N~l~~ 389 (752)
++..+..|..+++|+.|+|++|.+..
T Consensus 279 ~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 279 SSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp SCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CccChHHhccccCCCEEEccCCCcCC
Confidence 98888899999999999999999864
No 308
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=2.5e-30 Score=275.45 Aligned_cols=236 Identities=18% Similarity=0.213 Sum_probs=183.9
Q ss_pred CCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEE
Q 041438 131 NLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFL 210 (752)
Q Consensus 131 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 210 (752)
..++++.|+|++|+++ .+|..+..+++|++|+|++|.|+ .+|..|+++++|++|+|++|+++ .+|..|.++++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 3578999999999998 67888889999999999999999 88999999999999999999999 778899999999999
Q ss_pred eeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCc
Q 041438 211 YLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNY 290 (752)
Q Consensus 211 ~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 290 (752)
+|++|++.+.+|..++... +.+ .+..+++|++|++++|+++ .+|..+..+++|++|+|++|.
T Consensus 156 ~L~~n~~~~~~p~~~~~~~-----------~~~------~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~ 217 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTD-----------ASG------EHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSP 217 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC------------CC------CEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSC
T ss_pred ECCCCCCccccChhHhhcc-----------chh------hhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCC
Confidence 9999998888887765421 111 1345677778888888877 667777778888888888888
Q ss_pred CcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhcccccccEEEcCCCcCccccchh
Q 041438 291 IVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIE 370 (752)
Q Consensus 291 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 370 (752)
+++ +|..+..+++|+.|+|++|++.+.+|..++++++|++|+|++|++.+..|..+..+++|++|+|++|++.+.+|..
T Consensus 218 l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~ 296 (328)
T 4fcg_A 218 LSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSL 296 (328)
T ss_dssp CCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGG
T ss_pred CCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHH
Confidence 774 4556777777777777777777777777777777777777777777777767777777777777777777777777
Q ss_pred ccccccCCeeecCCccCC
Q 041438 371 LDNLIHLSELDLSHNFLG 388 (752)
Q Consensus 371 ~~~l~~L~~L~Ls~N~l~ 388 (752)
+.++++|+.+++..|.+.
T Consensus 297 l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 297 IAQLPANCIILVPPHLQA 314 (328)
T ss_dssp GGGSCTTCEEECCGGGSC
T ss_pred HhhccCceEEeCCHHHHH
Confidence 777777766666665553
No 309
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.97 E-value=2e-30 Score=297.34 Aligned_cols=267 Identities=26% Similarity=0.303 Sum_probs=174.0
Q ss_pred CCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccC
Q 041438 111 LAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDS 190 (752)
Q Consensus 111 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 190 (752)
+++|++++|+|+. +|..+. ++|++|+|++|+|+. +|. .+++|++|+|++|+|++ +|. .+++|++|+|++
T Consensus 42 l~~L~ls~n~L~~-lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~ 110 (622)
T 3g06_A 42 NAVLNVGESGLTT-LPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFS 110 (622)
T ss_dssp CCEEECCSSCCSC-CCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECS
T ss_pred CcEEEecCCCcCc-cChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcC
Confidence 5566666666663 344443 566666666666663 333 45666666666666663 343 456666666666
Q ss_pred CCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCC
Q 041438 191 NFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGN 270 (752)
Q Consensus 191 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 270 (752)
|+|++. |. .+++|+.|+|++|+|++ +|.. +++|++|++++|++++. |. .+++|+.|++++|.|++
T Consensus 111 N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l-~~-----~~~~L~~L~L~~N~l~~- 175 (622)
T 3g06_A 111 NPLTHL-PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL-PA-----LPSELCKLWAYNNQLTS- 175 (622)
T ss_dssp CCCCCC-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CC-----CCTTCCEEECCSSCCSC-
T ss_pred CcCCCC-CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCc-CC-----ccCCCCEEECCCCCCCC-
Confidence 666653 22 44666666666666664 3332 25566666666666542 21 23567777777777775
Q ss_pred CCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhccc
Q 041438 271 IPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSL 350 (752)
Q Consensus 271 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 350 (752)
+| ..+++|+.|+|++|.|++ +|.. +++|+.|++++|.++. +|. .+++|++|+|++|+|++++ ..+
T Consensus 176 l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~lp----~~l 240 (622)
T 3g06_A 176 LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPA---LPSGLKELIVSGNRLTSLP----VLP 240 (622)
T ss_dssp CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCSCCC----CCC
T ss_pred Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCC---CCCCCCEEEccCCccCcCC----CCC
Confidence 34 345778888888888775 3332 3677788888888774 333 2367888888888887744 455
Q ss_pred ccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCchhhhccC
Q 041438 351 VKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELH 423 (752)
Q Consensus 351 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 423 (752)
++|+.|+|++|+|+. +|. .+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|..+..++
T Consensus 241 ~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 241 SELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 778888888888874 443 5677888888888887 4567788888888888888888888777776654
No 310
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=2.2e-30 Score=270.59 Aligned_cols=165 Identities=22% Similarity=0.181 Sum_probs=120.4
Q ss_pred CCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeec
Q 041438 255 PQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDL 334 (752)
Q Consensus 255 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 334 (752)
++|++|++++|.+++..|..+..+++|++|++++|.+++..+..|.++++|+.|+|++|++++..+..|..+++|++|+|
T Consensus 105 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 184 (285)
T 1ozn_A 105 GRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLL 184 (285)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEEC
Confidence 34445555555555555666777788888888888888777777888888888888888888777777888888888888
Q ss_pred cccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcC
Q 041438 335 SANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGL 414 (752)
Q Consensus 335 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 414 (752)
++|.+++..+..|..+++|+.|++++|++++..+..+..+++|++|+|++|.+....+.. .-...++.+..+.|.+...
T Consensus 185 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~ 263 (285)
T 1ozn_A 185 HQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCS 263 (285)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEE
T ss_pred CCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccC
Confidence 888888888888888888888888888888777777888888888888888776543221 1123344455566666666
Q ss_pred Cchhhh
Q 041438 415 IPRCFE 420 (752)
Q Consensus 415 ~p~~~~ 420 (752)
.|..+.
T Consensus 264 ~p~~l~ 269 (285)
T 1ozn_A 264 LPQRLA 269 (285)
T ss_dssp ESGGGT
T ss_pred CchHhC
Confidence 665543
No 311
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=8.3e-30 Score=283.25 Aligned_cols=227 Identities=20% Similarity=0.214 Sum_probs=155.1
Q ss_pred CCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEc
Q 041438 109 PHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLIL 188 (752)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 188 (752)
+++++|+|++|+|+++.+..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 67888999999988888888888888999999988888888888888888888888888888777778888888888888
Q ss_pred cCCCCCCcCCcCccCCCcceEEeecccc-ccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEcccccc
Q 041438 189 DSNFLGGSIPRSLSNFTNLVFLYLYNNS-FSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNI 267 (752)
Q Consensus 189 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l 267 (752)
++|+|+...+..|.++++|++|+|++|+ +....+..|.+++ +|++|++++|++
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~--------------------------~L~~L~L~~n~l 197 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLS--------------------------NLRYLNLAMCNL 197 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCS--------------------------SCCEEECTTSCC
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhccc--------------------------ccCeecCCCCcC
Confidence 8888887777788888888888888743 4433333444444 444555555555
Q ss_pred CCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhh
Q 041438 268 TGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESL 347 (752)
Q Consensus 268 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 347 (752)
+.. | .+..+++|++|+|++|.|++..|..|.++++|+.|+|++|++++..+..|.++++|++|+|++|+|+++++..|
T Consensus 198 ~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 275 (440)
T 3zyj_A 198 REI-P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLF 275 (440)
T ss_dssp SSC-C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTT
T ss_pred ccc-c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHh
Confidence 422 2 24455555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred cccccccEEEcCCCcC
Q 041438 348 GSLVKLYYLNLSHNKL 363 (752)
Q Consensus 348 ~~l~~L~~L~Ls~N~l 363 (752)
..+++|+.|+|++|.+
T Consensus 276 ~~l~~L~~L~L~~Np~ 291 (440)
T 3zyj_A 276 TPLHHLERIHLHHNPW 291 (440)
T ss_dssp SSCTTCCEEECCSSCE
T ss_pred ccccCCCEEEcCCCCc
Confidence 5555555555555554
No 312
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=1.3e-29 Score=281.77 Aligned_cols=247 Identities=24% Similarity=0.273 Sum_probs=176.8
Q ss_pred CCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeecc
Q 041438 135 LEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYN 214 (752)
Q Consensus 135 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 214 (752)
.+.++.+++.++ .+|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 457888888887 4565553 6788888888888877778888888888888888888877777888888888888888
Q ss_pred ccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCC-cCcC
Q 041438 215 NSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSN-YIVG 293 (752)
Q Consensus 215 N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~ 293 (752)
|+|++..+..|. .+++|++|+|++|+|++..+..|..+++|++|+|++| .+..
T Consensus 122 n~l~~~~~~~~~--------------------------~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~ 175 (440)
T 3zyj_A 122 NRLTTIPNGAFV--------------------------YLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSY 175 (440)
T ss_dssp SCCSSCCTTTSC--------------------------SCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCE
T ss_pred CcCCeeCHhHhh--------------------------ccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcce
Confidence 887755544443 3455667777777777777777888888888888884 4444
Q ss_pred CCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhcccccccEEEcCCCcCccccchhccc
Q 041438 294 EIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDN 373 (752)
Q Consensus 294 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 373 (752)
..+..|.++++|+.|+|++|+++.. | .+..+++|++|+|++|+|+++.+..|.++++|+.|+|++|++++..+..|.+
T Consensus 176 i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 253 (440)
T 3zyj_A 176 ISEGAFEGLSNLRYLNLAMCNLREI-P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDN 253 (440)
T ss_dssp ECTTTTTTCSSCCEEECTTSCCSSC-C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTT
T ss_pred eCcchhhcccccCeecCCCCcCccc-c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcC
Confidence 4445677777777777777777743 3 3666777777777777777766677777777777777777776666666666
Q ss_pred cccCCeeecCCccCCCCCCcccccccccceEEccCCcCC
Q 041438 374 LIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLS 412 (752)
Q Consensus 374 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 412 (752)
+++|++|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 254 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 254 LQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 666666666666666666666666666666666666654
No 313
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.97 E-value=2.5e-31 Score=281.46 Aligned_cols=253 Identities=21% Similarity=0.204 Sum_probs=197.8
Q ss_pred cccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCC-CCcCCcCcc-------CCCcceEEeecccccccccc
Q 041438 151 SEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFL-GGSIPRSLS-------NFTNLVFLYLYNNSFSGSIP 222 (752)
Q Consensus 151 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l-~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p 222 (752)
+.++..++|+.|++++|.+ .+|..+... |+.|+|++|++ .+.+|..+. ++++|++|+|++|++++.+|
T Consensus 37 ~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 112 (312)
T 1wwl_A 37 ELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAP 112 (312)
T ss_dssp EEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCC
T ss_pred EEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhH
Confidence 3467788899999999998 667666544 88888888888 345555554 67778888888888777666
Q ss_pred ccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCC-----CCCCEEecCCCcCcCCCCc
Q 041438 223 QQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGES-----PQLQYLDLSSNYIVGEIPT 297 (752)
Q Consensus 223 ~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~ 297 (752)
..+ .++.+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|.
T Consensus 113 ~~~------------------------~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~ 167 (312)
T 1wwl_A 113 PPL------------------------LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCE 167 (312)
T ss_dssp CCS------------------------SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTT
T ss_pred HHH------------------------HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHH
Confidence 554 123455666777777777766 6666655 7888888888888888778
Q ss_pred cccCCcccCEEEccCCcCccc--CCccc--CCCcccceeecccccccc---ccchhhcccccccEEEcCCCcCccccc-h
Q 041438 298 QLGNIIYLNRISLSGNKLSGR--IPGEL--GSLINLEYLDLSANHLSN---FVLESLGSLVKLYYLNLSHNKLSQQIP-I 369 (752)
Q Consensus 298 ~~~~l~~L~~L~Ls~N~l~~~--~p~~~--~~l~~L~~L~Ls~N~l~~---~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~ 369 (752)
.|+++++|+.|+|++|++.+. .|..+ ..+++|++|+|++|+|++ .....+..+++|++|+|++|++++.+| .
T Consensus 168 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 247 (312)
T 1wwl_A 168 QVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAP 247 (312)
T ss_dssp TCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCS
T ss_pred HhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchh
Confidence 888888888888888887664 23333 788999999999999984 334556788999999999999998775 5
Q ss_pred hccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCchhhhccCCCcEEEccCCcccC
Q 041438 370 ELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEG 437 (752)
Q Consensus 370 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 437 (752)
.+..+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|++|++++|++++
T Consensus 248 ~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 248 SCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred hhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 6777899999999999998 5566555 8999999999999988 65 8999999999999999976
No 314
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=1.7e-31 Score=283.47 Aligned_cols=264 Identities=23% Similarity=0.191 Sum_probs=136.5
Q ss_pred eecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccc
Q 041438 138 LDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSF 217 (752)
Q Consensus 138 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 217 (752)
++++.+.+....+..+..+++|++|+|++|+|++..|..|.++++|++|+|++|++++..| |..+++|++|+|++|+|
T Consensus 15 ~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l 92 (317)
T 3o53_A 15 EKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYV 92 (317)
T ss_dssp ESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEE
T ss_pred eeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcc
Confidence 3444444443333334444445555555555554444445555555555555555544333 45555555555555555
Q ss_pred cccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCc
Q 041438 218 SGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPT 297 (752)
Q Consensus 218 ~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 297 (752)
++..+ . ++|++|++++|++++..+.. +++|++|++++|.+++..+.
T Consensus 93 ~~l~~-----~--------------------------~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~ 138 (317)
T 3o53_A 93 QELLV-----G--------------------------PSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDL 138 (317)
T ss_dssp EEEEE-----C--------------------------TTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGB
T ss_pred ccccC-----C--------------------------CCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccch
Confidence 43211 1 23334444444443332221 23444555555555444444
Q ss_pred cccCCcccCEEEccCCcCcccCCccc-CCCcccceeeccccccccccchhhcccccccEEEcCCCcCccccchhcccccc
Q 041438 298 QLGNIIYLNRISLSGNKLSGRIPGEL-GSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIH 376 (752)
Q Consensus 298 ~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 376 (752)
.+..+++|+.|++++|++++..+..+ ..+++|++|+|++|.+++... ...+++|++|+|++|++++..+ .+..+++
T Consensus 139 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~ 215 (317)
T 3o53_A 139 DEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAG 215 (317)
T ss_dssp CTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTT
T ss_pred hhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcchh-hhcccCc
Confidence 45555555555555555554444443 245555555555555555422 2235566666666666654333 3666666
Q ss_pred CCeeecCCccCCCCCCcccccccccceEEccCCcCC-cCCchhhhccCCCcEEEcc-CCcccCcCCC
Q 041438 377 LSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLS-GLIPRCFEELHGLLHIDIS-YNKLEGHIPN 441 (752)
Q Consensus 377 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~ls-~N~l~~~~p~ 441 (752)
|++|+|++|++++ +|..+..+++|+.|+|++|+++ +.+|..+..++.|+.++++ .+.++|..|.
T Consensus 216 L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 216 VTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp CSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred ccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 6666666666653 3445666677777777777776 5566677777777777776 4456665554
No 315
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=2.6e-31 Score=282.02 Aligned_cols=243 Identities=22% Similarity=0.212 Sum_probs=204.2
Q ss_pred ccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCcccccccccc
Q 041438 158 HLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLC 237 (752)
Q Consensus 158 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~ 237 (752)
+++.++++.+.+...++..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+ +.
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~----------- 77 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LE----------- 77 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ET-----------
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hh-----------
Confidence 45667788888876666667778889999999999988888888888899999999988876543 33
Q ss_pred ccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcc
Q 041438 238 INQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSG 317 (752)
Q Consensus 238 ~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 317 (752)
.+++|++|++++|++++.. ..++|++|++++|.+++..+.. +++|+.|++++|++++
T Consensus 78 ---------------~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~ 134 (317)
T 3o53_A 78 ---------------SLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITM 134 (317)
T ss_dssp ---------------TCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCS
T ss_pred ---------------hcCCCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCC
Confidence 4456778888888887543 3389999999999999876654 5789999999999999
Q ss_pred cCCcccCCCcccceeeccccccccccchhhc-ccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccc
Q 041438 318 RIPGELGSLINLEYLDLSANHLSNFVLESLG-SLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRIC 396 (752)
Q Consensus 318 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 396 (752)
..+..++.+++|++|+|++|.+++..+..+. .+++|++|+|++|++++. + ....+++|++|+|++|++++..+. +.
T Consensus 135 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~~-~~ 211 (317)
T 3o53_A 135 LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPE-FQ 211 (317)
T ss_dssp GGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGG-GG
T ss_pred ccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcchhh-hc
Confidence 8898999999999999999999998888774 789999999999999866 3 234589999999999999876555 89
Q ss_pred cccccceEEccCCcCCcCCchhhhccCCCcEEEccCCccc-CcCC
Q 041438 397 RMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLE-GHIP 440 (752)
Q Consensus 397 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~-~~~p 440 (752)
.+++|+.|+|++|+++++ |..+..+++|+.|++++|+++ +.+|
T Consensus 212 ~l~~L~~L~L~~N~l~~l-~~~~~~l~~L~~L~l~~N~~~~~~~~ 255 (317)
T 3o53_A 212 SAAGVTWISLRNNKLVLI-EKALRFSQNLEHFDLRGNGFHCGTLR 255 (317)
T ss_dssp GGTTCSEEECTTSCCCEE-CTTCCCCTTCCEEECTTCCCBHHHHH
T ss_pred ccCcccEEECcCCcccch-hhHhhcCCCCCEEEccCCCccCcCHH
Confidence 999999999999999965 778999999999999999998 4443
No 316
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=6e-28 Score=276.74 Aligned_cols=263 Identities=25% Similarity=0.243 Sum_probs=222.1
Q ss_pred CCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEee
Q 041438 133 SKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYL 212 (752)
Q Consensus 133 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 212 (752)
.+++.|++++|.|+ .+|..+. ++|++|+|++|.|+. +|. .+++|++|+|++|+|++ +|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEEC
Confidence 35899999999999 6677665 899999999999994 555 57899999999999995 554 6799999999
Q ss_pred ccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCc
Q 041438 213 YNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIV 292 (752)
Q Consensus 213 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 292 (752)
++|+|++. |. .+++|+.|++++|++++. |. .+++|++|++++|++++. |. .+++|+.|++++|.|+
T Consensus 109 s~N~l~~l-~~---~l~~L~~L~L~~N~l~~l-p~-----~l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~ 174 (622)
T 3g06_A 109 FSNPLTHL-PA---LPSGLCKLWIFGNQLTSL-PV-----LPPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLT 174 (622)
T ss_dssp CSCCCCCC-CC---CCTTCCEEECCSSCCSCC-CC-----CCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCS
T ss_pred cCCcCCCC-CC---CCCCcCEEECCCCCCCcC-CC-----CCCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCC
Confidence 99999964 44 568899999999999874 32 348999999999999864 43 3578999999999999
Q ss_pred CCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhcccccccEEEcCCCcCccccchhcc
Q 041438 293 GEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELD 372 (752)
Q Consensus 293 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 372 (752)
+ +| ..+++|+.|++++|++++ +|.. +++|+.|++++|.++.++. .+++|+.|+|++|+|++ +| .
T Consensus 175 ~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l~~----~~~~L~~L~Ls~N~L~~-lp---~ 238 (622)
T 3g06_A 175 S-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSLPA----LPSGLKELIVSGNRLTS-LP---V 238 (622)
T ss_dssp C-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSCCC----CCTTCCEEECCSSCCSC-CC---C
T ss_pred C-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccccCC----CCCCCCEEEccCCccCc-CC---C
Confidence 6 55 456899999999999996 4433 4789999999999997653 35889999999999986 45 5
Q ss_pred ccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCchhhhccCCCcEEEccCCcccCcCCC
Q 041438 373 NLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPN 441 (752)
Q Consensus 373 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 441 (752)
.+++|+.|+|++|.|+...+ .+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|.
T Consensus 239 ~l~~L~~L~Ls~N~L~~lp~----~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 239 LPSELKELMVSGNRLTSLPM----LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred CCCcCcEEECCCCCCCcCCc----ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 66899999999999986444 5789999999999999 5588899999999999999999987764
No 317
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=1.7e-29 Score=283.68 Aligned_cols=234 Identities=23% Similarity=0.200 Sum_probs=116.4
Q ss_pred ccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCcccccccccc
Q 041438 158 HLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLC 237 (752)
Q Consensus 158 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~ 237 (752)
+|++|+|++|.|++..|..|+.+++|++|+|++|.+++.+| |.++++|++|+|++|.|++..+. +
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~-----~-------- 99 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG-----P-------- 99 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC-----T--------
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC-----C--------
Confidence 55555555555555445555555555555555555554443 55555555555555555532211 2
Q ss_pred ccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcc
Q 041438 238 INQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSG 317 (752)
Q Consensus 238 ~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 317 (752)
+|++|++++|.|++..+. .+++|++|+|++|.+++..|..++++++|+.|+|++|.+++
T Consensus 100 ------------------~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 158 (487)
T 3oja_A 100 ------------------SIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT 158 (487)
T ss_dssp ------------------TCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCE
T ss_pred ------------------CcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCC
Confidence 233334444443333222 12344444444444444444444444444444444444444
Q ss_pred cCCcccC-CCcccceeeccccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccc
Q 041438 318 RIPGELG-SLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRIC 396 (752)
Q Consensus 318 ~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 396 (752)
.+|..+. .+++|++|+|++|.|++.++ +..+++|+.|+|++|+|++.+| .+..+++|+.|+|++|.|++ +|..+.
T Consensus 159 ~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~ 234 (487)
T 3oja_A 159 VNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALR 234 (487)
T ss_dssp EEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCC
T ss_pred cChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhc
Confidence 4444443 44455555555555544422 2235555555555555554333 25555555555555555554 344455
Q ss_pred cccccceEEccCCcCC-cCCchhhhccCCCcEEEcc
Q 041438 397 RMESLEKLNLSYNNLS-GLIPRCFEELHGLLHIDIS 431 (752)
Q Consensus 397 ~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~ls 431 (752)
.+++|+.|++++|.++ +.+|..+..++.|+.++++
T Consensus 235 ~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 235 FSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 5566666666666665 4455556666666666554
No 318
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=8e-28 Score=249.00 Aligned_cols=216 Identities=23% Similarity=0.281 Sum_probs=110.0
Q ss_pred CCCcccceeeCCCCCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCC
Q 041438 71 SLCTWSGIHCNHAGRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIP 150 (752)
Q Consensus 71 ~~c~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 150 (752)
++|.|.|+.|.-.+.+..++++ +++++. +|..+. ++|++|+|++|+|+++.+
T Consensus 3 ~~C~~~~~~C~c~~~~~~l~~~-------------------------~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~ 54 (270)
T 2o6q_A 3 ALCKKDGGVCSCNNNKNSVDCS-------------------------SKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPS 54 (270)
T ss_dssp CCBGGGTCSBEEETTTTEEECT-------------------------TSCCSS-CCSCCC--TTCSEEECCSSCCSCCCT
T ss_pred ccCCCCCCCCEeCCCCCEEEcc-------------------------CCCCCc-cCCCCC--CCCCEEECcCCCCCeeCH
Confidence 7899999999643333344444 444443 232222 345555555555554444
Q ss_pred cccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccc
Q 041438 151 SEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKS 230 (752)
Q Consensus 151 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 230 (752)
..|.++++|++|+|++|+|+...+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.+++
T Consensus 55 ~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~- 133 (270)
T 2o6q_A 55 KAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLT- 133 (270)
T ss_dssp TSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCT-
T ss_pred HHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCc-
Confidence 4555555555555555555544444445555555555555555554444555555555555555555544433333322
Q ss_pred cccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEc
Q 041438 231 LFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISL 310 (752)
Q Consensus 231 L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 310 (752)
+|++|++++|+|++..+..|..+++|++|+|++|.+++..+..|.++++|+.|+|
T Consensus 134 -------------------------~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 188 (270)
T 2o6q_A 134 -------------------------KLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKL 188 (270)
T ss_dssp -------------------------TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred -------------------------CCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEEC
Confidence 2333444444444333333444455555555555555444444555555555555
Q ss_pred cCCcCcccCCcccCCCcccceeeccccccc
Q 041438 311 SGNKLSGRIPGELGSLINLEYLDLSANHLS 340 (752)
Q Consensus 311 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 340 (752)
++|++++..+..|..+++|+.|+|++|.+.
T Consensus 189 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 189 DNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 555555444445555555555666655554
No 319
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=1.8e-29 Score=283.38 Aligned_cols=223 Identities=23% Similarity=0.211 Sum_probs=191.2
Q ss_pred CCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCC
Q 041438 178 GQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQL 257 (752)
Q Consensus 178 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L 257 (752)
...++|++|+|++|.+++..|..|.++++|++|+|++|.+++..| |+ .+++|
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~--------------------------~l~~L 82 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LE--------------------------SLSTL 82 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CT--------------------------TCTTC
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cc--------------------------cCCCC
Confidence 345578999999999988888888888999999999988886554 33 44567
Q ss_pred cEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeecccc
Q 041438 258 SLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSAN 337 (752)
Q Consensus 258 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 337 (752)
++|+|++|.|++..+ .++|++|++++|.|++..+.. +++|+.|+|++|.+++..|..++.+++|++|+|++|
T Consensus 83 ~~L~Ls~N~l~~l~~-----~~~L~~L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 154 (487)
T 3oja_A 83 RTLDLNNNYVQELLV-----GPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLN 154 (487)
T ss_dssp CEEECCSSEEEEEEE-----CTTCCEEECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTS
T ss_pred CEEEecCCcCCCCCC-----CCCcCEEECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCC
Confidence 788888888876543 389999999999999877654 578999999999999999999999999999999999
Q ss_pred ccccccchhhc-ccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCc
Q 041438 338 HLSNFVLESLG-SLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIP 416 (752)
Q Consensus 338 ~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 416 (752)
.+++.+|..+. .+++|+.|+|++|.|++..+ +..+++|+.|+|++|.|++.+|. +..+++|+.|+|++|+|+++ |
T Consensus 155 ~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~l-p 230 (487)
T 3oja_A 155 EIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVLI-E 230 (487)
T ss_dssp CCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCEE-C
T ss_pred CCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCccc-c
Confidence 99999888886 79999999999999987633 44699999999999999986665 88999999999999999984 7
Q ss_pred hhhhccCCCcEEEccCCccc-CcCC
Q 041438 417 RCFEELHGLLHIDISYNKLE-GHIP 440 (752)
Q Consensus 417 ~~~~~l~~L~~L~ls~N~l~-~~~p 440 (752)
..+..+++|+.|++++|++. +.+|
T Consensus 231 ~~l~~l~~L~~L~l~~N~l~c~~~~ 255 (487)
T 3oja_A 231 KALRFSQNLEHFDLRGNGFHCGTLR 255 (487)
T ss_dssp TTCCCCTTCCEEECTTCCBCHHHHH
T ss_pred hhhccCCCCCEEEcCCCCCcCcchH
Confidence 77999999999999999998 4443
No 320
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=1.2e-26 Score=241.09 Aligned_cols=109 Identities=18% Similarity=0.161 Sum_probs=55.7
Q ss_pred CCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEcc
Q 041438 110 HLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILD 189 (752)
Q Consensus 110 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 189 (752)
+|++|+|++|+|+++.+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.|++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45555555555555555555555555555555555555544455555555555555555554444444555555555555
Q ss_pred CCCCCCcCCcCccCCCcceEEeecccccc
Q 041438 190 SNFLGGSIPRSLSNFTNLVFLYLYNNSFS 218 (752)
Q Consensus 190 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 218 (752)
+|++++..+..+.++++|++|+|++|+++
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 137 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQ 137 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccc
Confidence 55444444434444444444444444443
No 321
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=2.6e-26 Score=238.39 Aligned_cols=227 Identities=21% Similarity=0.160 Sum_probs=132.3
Q ss_pred eeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCcccccccccccccc
Q 041438 162 LHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQL 241 (752)
Q Consensus 162 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l 241 (752)
.+.++..++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--------------- 73 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQ--------------- 73 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTT---------------
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHcc---------------
Confidence 444555555 3444443 3566666666666666555666666666666666666544433332
Q ss_pred CCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCc
Q 041438 242 NGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPG 321 (752)
Q Consensus 242 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 321 (752)
.+++|++|++++|.+++..+..|..+++|++|++++|.+++..+..+.++++|++|++++|++++..
T Consensus 74 -----------~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-- 140 (276)
T 2z62_A 74 -----------SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK-- 140 (276)
T ss_dssp -----------TCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCC--
T ss_pred -----------CCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceec--
Confidence 2334445555556555555555566666666666666665544444555555555555555554321
Q ss_pred ccCCCcccceeeccccccccccchhhcccccccEEEcCCCcCccccchhccccccCC----eeecCCccCCCCCCccccc
Q 041438 322 ELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLS----ELDLSHNFLGEKISSRICR 397 (752)
Q Consensus 322 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~~~~~~~ 397 (752)
.|..|..+++|++|+|++|++++..+..+..+++|+ .|++++|.+++..+..+..
T Consensus 141 ---------------------l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~ 199 (276)
T 2z62_A 141 ---------------------LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE 199 (276)
T ss_dssp ---------------------CCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS
T ss_pred ---------------------CchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCC
Confidence 244444555555555555555544444444444444 5666666665555544443
Q ss_pred ccccceEEccCCcCCcCCchhhhccCCCcEEEccCCcccCcCCC
Q 041438 398 MESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEGHIPN 441 (752)
Q Consensus 398 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 441 (752)
.+|+.|+|++|++++.++..|..+++|+.|++++|++++..|.
T Consensus 200 -~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 200 -IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp -CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTT
T ss_pred -CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCc
Confidence 3677788888888777777777788888888888888776654
No 322
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=2e-25 Score=230.86 Aligned_cols=181 Identities=23% Similarity=0.217 Sum_probs=84.7
Q ss_pred CCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEcc
Q 041438 110 HLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILD 189 (752)
Q Consensus 110 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 189 (752)
+|++|+|++|+|+++.+..|.++++|++|+|++|+|+.+.+..|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 44455555555544444445555555555555555544444444445555555555555544444444444555555555
Q ss_pred CCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCC
Q 041438 190 SNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITG 269 (752)
Q Consensus 190 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 269 (752)
+|++++..+..|.++++|++|+|++|+|++..+..|. .+++|+.|++++|++++
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~--------------------------~l~~L~~L~L~~n~l~~ 171 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFD--------------------------KLTSLKELRLYNNQLKR 171 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--------------------------TCTTCCEEECCSSCCSC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHcc--------------------------CCcccceeEecCCcCcE
Confidence 5555444444444455555555555544433222222 22233344444444444
Q ss_pred CCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCc
Q 041438 270 NIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLS 316 (752)
Q Consensus 270 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 316 (752)
..+..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|.+.
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 172 VPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred eChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 44444444445555555555554444444444445555555555443
No 323
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=3e-26 Score=237.42 Aligned_cols=163 Identities=22% Similarity=0.181 Sum_probs=98.6
Q ss_pred CCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeec
Q 041438 255 PQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDL 334 (752)
Q Consensus 255 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 334 (752)
++|++|++++|.+++..+..+..+++|++|+|++|++++..+..|.++++|+.|++++|++++..+..|+.+++|++|+|
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 34444444444444444444555555555555555555555555555555566666666555555555566666666666
Q ss_pred cccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcC
Q 041438 335 SANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGL 414 (752)
Q Consensus 335 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 414 (752)
++|++++.++..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+.+ .+++|+.|+++.|.++|.
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ 237 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGV 237 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGG
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCc
Confidence 6666666655556666666666666666666666666666666777777666643 344677777777777777
Q ss_pred CchhhhccCC
Q 041438 415 IPRCFEELHG 424 (752)
Q Consensus 415 ~p~~~~~l~~ 424 (752)
+|..++.+..
T Consensus 238 ip~~~~~~~~ 247 (272)
T 3rfs_A 238 VRNSAGSVAP 247 (272)
T ss_dssp BBCTTSCBCG
T ss_pred ccCcccccCC
Confidence 7777665543
No 324
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=1.8e-25 Score=231.51 Aligned_cols=208 Identities=25% Similarity=0.246 Sum_probs=113.8
Q ss_pred CCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcE
Q 041438 106 SSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNH 185 (752)
Q Consensus 106 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 185 (752)
..+++|+.|++++|.++.+ +.++.+++|++|+|++|++++. ..+..+++|++|+|++|.|++..+..|.++++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 113 (272)
T 3rfs_A 38 NELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKE 113 (272)
T ss_dssp HHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred ccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCE
Confidence 3445556666666655542 2355555566666666655542 24555555555555555555555555555555555
Q ss_pred EEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEcccc
Q 041438 186 LILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSIN 265 (752)
Q Consensus 186 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N 265 (752)
|+|++|++++..+..|.++++|++|+|++|++++..+..|+ .+++|+.|++++|
T Consensus 114 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--------------------------~l~~L~~L~l~~n 167 (272)
T 3rfs_A 114 LVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFD--------------------------KLTNLTELDLSYN 167 (272)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--------------------------TCTTCCEEECCSS
T ss_pred EECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhc--------------------------cCccCCEEECCCC
Confidence 55555555555555555555555555555555544333332 3344555555555
Q ss_pred ccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccch
Q 041438 266 NITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLE 345 (752)
Q Consensus 266 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 345 (752)
++++..+..+..+++|++|+|++|.+++..|..+..+++|+.|++++|.+.+. +++|+.|+++.|.++|.+|.
T Consensus 168 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~ 240 (272)
T 3rfs_A 168 QLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRN 240 (272)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBC
T ss_pred CcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccC
Confidence 55555555555566666666666666655555555666666666666655432 23455555555555555555
Q ss_pred hhccc
Q 041438 346 SLGSL 350 (752)
Q Consensus 346 ~~~~l 350 (752)
.++.+
T Consensus 241 ~~~~~ 245 (272)
T 3rfs_A 241 SAGSV 245 (272)
T ss_dssp TTSCB
T ss_pred ccccc
Confidence 54443
No 325
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.93 E-value=2.2e-28 Score=282.60 Aligned_cols=349 Identities=12% Similarity=0.062 Sum_probs=169.1
Q ss_pred CEEEEEcCCCCCcccccccccCC-CCC-CCEEECCCCc-ccc-cCCccCcCCCCCCeeecCCCccccc----CCcccccc
Q 041438 85 RVFGINLTSISLNGTLLEFSFSS-FPH-LAYLDLYNNE-LFD-IIPPQISNLSKLEYLDFLTNKLSGH----IPSEISLL 156 (752)
Q Consensus 85 ~v~~l~l~~~~l~g~l~~~~f~~-l~~-L~~L~L~~n~-l~~-~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l 156 (752)
.+..++|+++.+.+..... +.. +++ |++|+|++|. ++. .++..+.++++|++|+|++|.+++. ++..+..+
T Consensus 113 ~L~~L~L~~~~i~~~~~~~-l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~ 191 (592)
T 3ogk_B 113 QLKSVHFRRMIVSDLDLDR-LAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHN 191 (592)
T ss_dssp TCCEEEEESCBCCHHHHHH-HHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHC
T ss_pred CCCeEEeeccEecHHHHHH-HHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcC
Confidence 4566676666554332111 111 222 5555555544 111 0111123445555555555554433 12223344
Q ss_pred cccceeeccCcccCC----CCCcccCCCCCCcEEEccCCCCCCcCCcCccC---------------------------CC
Q 041438 157 THLTILHISRNQLNG----SIPHEVGQLNFLNHLILDSNFLGGSIPRSLSN---------------------------FT 205 (752)
Q Consensus 157 ~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~---------------------------l~ 205 (752)
++|++|+|++|.+++ .++..+.++++|++|+|++|.+.+ +|..+.+ ++
T Consensus 192 ~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~ 270 (592)
T 3ogk_B 192 TSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPR 270 (592)
T ss_dssp CCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCT
T ss_pred CCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccc
Confidence 555555555555542 122223344555555555555443 3344444 44
Q ss_pred cceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEe
Q 041438 206 NLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLD 285 (752)
Q Consensus 206 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 285 (752)
+|+.|+++++. .+.+|..+..+++|++|++++|.+++..... .+..+++|+.|+++++...+.++..+..+++|++|+
T Consensus 271 ~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~-~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~ 348 (592)
T 3ogk_B 271 KLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCT-LIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLR 348 (592)
T ss_dssp TCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHH-HHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEE
T ss_pred cccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHH-HHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEE
Confidence 55555554432 2244555555666666666666544322211 124556666666662222222232334455666666
Q ss_pred cC-----------CCcCcCC-CCccccCCcccCEEEccCCcCcccCCcccCC-Ccccceeecc----ccccccc-----c
Q 041438 286 LS-----------SNYIVGE-IPTQLGNIIYLNRISLSGNKLSGRIPGELGS-LINLEYLDLS----ANHLSNF-----V 343 (752)
Q Consensus 286 Ls-----------~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----~ 343 (752)
++ .|.+++. ++..+..+++|+.|+++.|++++..+..+.. +++|+.|+|+ .|.+++. .
T Consensus 349 L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~ 428 (592)
T 3ogk_B 349 IERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGV 428 (592)
T ss_dssp EECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHH
T ss_pred eecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHH
Confidence 66 2444432 1122334566666666666665544444443 5566666664 4555543 2
Q ss_pred chhhcccccccEEEcCCC--cCccccchhccc-cccCCeeecCCccCCCC-CCcccccccccceEEccCCcCCcC-Cchh
Q 041438 344 LESLGSLVKLYYLNLSHN--KLSQQIPIELDN-LIHLSELDLSHNFLGEK-ISSRICRMESLEKLNLSYNNLSGL-IPRC 418 (752)
Q Consensus 344 ~~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~-~p~~ 418 (752)
+..+.++++|+.|+|++| .+++..+..+.. +++|++|+|++|.+++. ++..+..+++|++|+|++|.+++. ++..
T Consensus 429 ~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 508 (592)
T 3ogk_B 429 RSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAA 508 (592)
T ss_dssp HHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHH
T ss_pred HHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHH
Confidence 233455666666666532 244444444433 56666666666666542 233345556666666666666543 2333
Q ss_pred hhccCCCcEEEccCCcccC
Q 041438 419 FEELHGLLHIDISYNKLEG 437 (752)
Q Consensus 419 ~~~l~~L~~L~ls~N~l~~ 437 (752)
+..+++|++|++++|++++
T Consensus 509 ~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 509 VTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp HHHCSSCCEEEEESCBCCT
T ss_pred HHhcCccCeeECcCCcCCH
Confidence 4456666666666666553
No 326
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=7.7e-25 Score=228.75 Aligned_cols=181 Identities=22% Similarity=0.229 Sum_probs=99.5
Q ss_pred ccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCC
Q 041438 104 SFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFL 183 (752)
Q Consensus 104 ~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 183 (752)
.+..+++++++++++|+++.+ |..+. ++|++|+|++|+|++..+..|.++++|++|+|++|.|++..+. +.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~i-p~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTAL-PPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCSSC-CSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred cccccCCccEEECCCCCCCcC-CCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 345667777777777777654 33332 5677777777777766666777777777777777777644332 556666
Q ss_pred cEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEcc
Q 041438 184 NHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVS 263 (752)
Q Consensus 184 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls 263 (752)
++|+|++|+|+ .+|..+.++++|++|+|++|+|++..|..|.++ ++|++|+|+
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l--------------------------~~L~~L~L~ 132 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGL--------------------------GELQELYLK 132 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTC--------------------------TTCCEEECT
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCC--------------------------CCCCEEECC
Confidence 66666666666 345555556666666666665554443333332 233344444
Q ss_pred ccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCc
Q 041438 264 INNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLS 316 (752)
Q Consensus 264 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 316 (752)
+|+|++..+..|..+++|+.|+|++|+|++..+..|.++++|+.|+|++|+|+
T Consensus 133 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC
Confidence 44444433334444444444444444444333333444444444444444444
No 327
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.92 E-value=8.7e-25 Score=223.56 Aligned_cols=190 Identities=25% Similarity=0.248 Sum_probs=101.7
Q ss_pred CCCcccceeeCCCCCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCC
Q 041438 71 SLCTWSGIHCNHAGRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIP 150 (752)
Q Consensus 71 ~~c~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 150 (752)
+||.|.|.+|... .++++++++.++. +|..+. ++|++|+|++|++++..+
T Consensus 3 ~Cp~~~gC~C~~~---------------------------~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~ 52 (251)
T 3m19_A 3 TCETVTGCTCNEG---------------------------KKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSD 52 (251)
T ss_dssp -CHHHHSSEEEGG---------------------------GTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCCC---------------------------CeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCH
Confidence 6889999999521 2335555555554 233333 356666666666666666
Q ss_pred cccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccc
Q 041438 151 SEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKS 230 (752)
Q Consensus 151 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 230 (752)
..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++
T Consensus 53 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-- 130 (251)
T 3m19_A 53 ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRL-- 130 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC--
T ss_pred hHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccC--
Confidence 566666666666666666666555556666666666666666665555556666666666666666554333333222
Q ss_pred cccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEc
Q 041438 231 LFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISL 310 (752)
Q Consensus 231 L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 310 (752)
++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 131 ------------------------~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 186 (251)
T 3m19_A 131 ------------------------TKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITL 186 (251)
T ss_dssp ------------------------TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred ------------------------CcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEe
Confidence 23334444444444333334444444444444444444444444444444444444
Q ss_pred cCCcCc
Q 041438 311 SGNKLS 316 (752)
Q Consensus 311 s~N~l~ 316 (752)
++|.+.
T Consensus 187 ~~N~~~ 192 (251)
T 3m19_A 187 FGNQFD 192 (251)
T ss_dssp CSCCBC
T ss_pred eCCcee
Confidence 444443
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.1e-24 Score=227.68 Aligned_cols=203 Identities=26% Similarity=0.247 Sum_probs=117.8
Q ss_pred cccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccc
Q 041438 153 ISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLF 232 (752)
Q Consensus 153 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 232 (752)
+.++++|+++++++|.++ .+|..+. ++++.|+|++|+|++..|..|.++++|++|+|++|+|++..+.
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--------- 73 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--------- 73 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC---------
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC---------
Confidence 344455555555555555 2333332 3455555555555555555555556666666666555532211
Q ss_pred cccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccC
Q 041438 233 DMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSG 312 (752)
Q Consensus 233 ~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 312 (752)
+.+++|++|++++|+|+ .+|..+..+++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 74 -------------------~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~ 133 (290)
T 1p9a_G 74 -------------------GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKG 133 (290)
T ss_dssp -------------------SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTT
T ss_pred -------------------CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCC
Confidence 12344555555555555 3445555666666666666666665556666666666666666
Q ss_pred CcCcccCCcccCCCcccceeeccccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCC
Q 041438 313 NKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLG 388 (752)
Q Consensus 313 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 388 (752)
|++++..+..|..+++|+.|+|++|+|+++++..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|.+.
T Consensus 134 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 134 NELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 6666666666666666666666666666666666666666666666666665 44555555556666666666553
No 329
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=2.6e-25 Score=235.00 Aligned_cols=160 Identities=17% Similarity=0.093 Sum_probs=67.6
Q ss_pred cccceeeccCcccCCCCCccc--CCCCCCcEEEccCCCCCCcCC----cCccCCCcceEEeeccccccccccccccCccc
Q 041438 157 THLTILHISRNQLNGSIPHEV--GQLNFLNHLILDSNFLGGSIP----RSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKS 230 (752)
Q Consensus 157 ~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 230 (752)
++|++|+|++|.+++..|..+ ..+++|++|+|++|++++..+ ..+..+++|++|+|++|++++..|..|+++++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 345555555555555555444 445555555555555544333 22234455555555555554444444444433
Q ss_pred cccccccccccCCC--cCCCCCCCCCCCCcEEEccccccCCCCC--c-ccCCCCCCCEEecCCCcCcCCCCccccCC---
Q 041438 231 LFDMKLCINQLNGA--IPLSIDWGRCPQLSLLDVSINNITGNIP--F-EIGESPQLQYLDLSSNYIVGEIPTQLGNI--- 302 (752)
Q Consensus 231 L~~l~l~~N~l~~~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~p--~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--- 302 (752)
|++|++++|++.+. ++....++.+++|++|+|++|+++...+ . .+..+++|++|+|++|+|++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 33333333332221 1111112233444444444444432111 1 12344445555555555544444444333
Q ss_pred cccCEEEccCCcCc
Q 041438 303 IYLNRISLSGNKLS 316 (752)
Q Consensus 303 ~~L~~L~Ls~N~l~ 316 (752)
++|++|+|++|+|+
T Consensus 251 ~~L~~L~Ls~N~l~ 264 (310)
T 4glp_A 251 SALNSLNLSFAGLE 264 (310)
T ss_dssp TTCCCEECCSSCCC
T ss_pred CcCCEEECCCCCCC
Confidence 24444444444444
No 330
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.92 E-value=4.4e-27 Score=254.26 Aligned_cols=258 Identities=19% Similarity=0.149 Sum_probs=129.4
Q ss_pred EECCCCcccccCCccCcCCCCCCeeecCCCcccccCC----ccccccc-ccceeeccCcccCCCCCcccCCC-----CCC
Q 041438 114 LDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIP----SEISLLT-HLTILHISRNQLNGSIPHEVGQL-----NFL 183 (752)
Q Consensus 114 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L 183 (752)
++|++|++++.+|..+...++|++|+|++|+|++..+ ..|..++ +|++|+|++|.|++..+..|..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566666666666555555556666666666665554 5555565 66666666666665555555554 666
Q ss_pred cEEEccCCCCCCcCCcCccC----C-CcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCC-CCCC
Q 041438 184 NHLILDSNFLGGSIPRSLSN----F-TNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGR-CPQL 257 (752)
Q Consensus 184 ~~L~L~~N~l~~~~p~~~~~----l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~-l~~L 257 (752)
++|+|++|++++..+..+.. + ++|++|+|++|+|++..+..+... +.. .++|
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~----------------------l~~~~~~L 140 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQA----------------------FSNLPASI 140 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH----------------------HTTSCTTC
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHH----------------------HHhCCCce
Confidence 66666666666555543333 2 566666666666665544433221 001 1234
Q ss_pred cEEEccccccCCCCC----cccCCCC-CCCEEecCCCcCcCCCCcccc----CC-cccCEEEccCCcCccc----CCccc
Q 041438 258 SLLDVSINNITGNIP----FEIGESP-QLQYLDLSSNYIVGEIPTQLG----NI-IYLNRISLSGNKLSGR----IPGEL 323 (752)
Q Consensus 258 ~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~----~p~~~ 323 (752)
++|+|++|++++..+ ..+...+ +|++|+|++|.|++..+..+. .. ++|+.|+|++|.+++. ++..+
T Consensus 141 ~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l 220 (362)
T 3goz_A 141 TSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIF 220 (362)
T ss_dssp CEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred eEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHH
Confidence 444444444442211 1222222 444455555544443333222 22 3455555555554431 22222
Q ss_pred CC-Ccccceeeccccccccccc----hhhcccccccEEEcCCCcCcccc-------chhccccccCCeeecCCccCCCCC
Q 041438 324 GS-LINLEYLDLSANHLSNFVL----ESLGSLVKLYYLNLSHNKLSQQI-------PIELDNLIHLSELDLSHNFLGEKI 391 (752)
Q Consensus 324 ~~-l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~-------p~~~~~l~~L~~L~Ls~N~l~~~~ 391 (752)
.. .++|++|+|++|.+++..+ ..+..+++|+.|+|++|.+.+.. +..+..+++|++||+++|.+....
T Consensus 221 ~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~ 300 (362)
T 3goz_A 221 SSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSH 300 (362)
T ss_dssp HHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGG
T ss_pred hcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcc
Confidence 22 2355555555555554433 22334455555555555533222 234555666666666666665543
Q ss_pred Cc
Q 041438 392 SS 393 (752)
Q Consensus 392 ~~ 393 (752)
+.
T Consensus 301 ~~ 302 (362)
T 3goz_A 301 SI 302 (362)
T ss_dssp CH
T ss_pred hH
Confidence 33
No 331
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.92 E-value=1.2e-26 Score=250.95 Aligned_cols=230 Identities=23% Similarity=0.208 Sum_probs=142.9
Q ss_pred eeecCCCcccccCCcccccccccceeeccCcccCCCCC----cccCCCC-CCcEEEccCCCCCCcCCcCccCC-----Cc
Q 041438 137 YLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIP----HEVGQLN-FLNHLILDSNFLGGSIPRSLSNF-----TN 206 (752)
Q Consensus 137 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~ 206 (752)
+++|++|++++.+|..+...++|++|+|++|.|++..+ ..|..++ +|++|+|++|++++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46788888888888777777778888888888887666 6677777 78888888888887777767665 77
Q ss_pred ceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCC-CCCcEEEccccccCCCCCccc----CC-CCC
Q 041438 207 LVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRC-PQLSLLDVSINNITGNIPFEI----GE-SPQ 280 (752)
Q Consensus 207 L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~----~~-l~~ 280 (752)
|++|+|++|++++..+..+... +..+ ++|++|+|++|+|++..+..+ .. .++
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~----------------------l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 139 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKT----------------------LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPAS 139 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHH----------------------HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTT
T ss_pred ccEEECcCCcCChHHHHHHHHH----------------------HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCc
Confidence 8888888888876665544331 1122 466777777777776555443 33 257
Q ss_pred CCEEecCCCcCcCCCCc----cccCCc-ccCEEEccCCcCcccCCcccC----CC-cccceeeccccccccc----cchh
Q 041438 281 LQYLDLSSNYIVGEIPT----QLGNII-YLNRISLSGNKLSGRIPGELG----SL-INLEYLDLSANHLSNF----VLES 346 (752)
Q Consensus 281 L~~L~Ls~N~l~~~~p~----~~~~l~-~L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~----~~~~ 346 (752)
|++|+|++|.+++..+. .+..++ +|++|+|++|++++..+..+. .+ ++|++|||++|.|++. .+..
T Consensus 140 L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~ 219 (362)
T 3goz_A 140 ITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYI 219 (362)
T ss_dssp CCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred eeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHH
Confidence 78888888877753332 233333 666666666666655443332 22 3666666666666552 2223
Q ss_pred hcc-cccccEEEcCCCcCccccch----hccccccCCeeecCCccCC
Q 041438 347 LGS-LVKLYYLNLSHNKLSQQIPI----ELDNLIHLSELDLSHNFLG 388 (752)
Q Consensus 347 ~~~-l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~ 388 (752)
+.. .++|++|+|++|++++..+. .+..+++|+.|+|++|.+.
T Consensus 220 l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~ 266 (362)
T 3goz_A 220 FSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVK 266 (362)
T ss_dssp HHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHT
T ss_pred HhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCcc
Confidence 333 23566666666666544332 2334455555555555533
No 332
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=2.3e-25 Score=235.35 Aligned_cols=228 Identities=17% Similarity=0.133 Sum_probs=181.9
Q ss_pred CCCCEEECCCCcccccCCc---cCcCCCCCCeeecCCCcccccCCccc--ccccccceeeccCcccCCCCC----cccCC
Q 041438 109 PHLAYLDLYNNELFDIIPP---QISNLSKLEYLDFLTNKLSGHIPSEI--SLLTHLTILHISRNQLNGSIP----HEVGQ 179 (752)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~---~~~~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~ 179 (752)
..++.|.++++.++...-. .+..+++|++|+|++|++++..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 4578888888887542111 12345779999999999999999988 899999999999999998665 44568
Q ss_pred CCCCcEEEccCCCCCCcCCcCccCCCcceEEeecccccccc--c--cccccCccccccccccccccCCCcCCCC-CCCCC
Q 041438 180 LNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGS--I--PQQIGNLKSLFDMKLCINQLNGAIPLSI-DWGRC 254 (752)
Q Consensus 180 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~l~l~~N~l~~~~~~~~-~~~~l 254 (752)
+++|++|+|++|++++..|..|.++++|++|+|++|++.+. + +..++++++|++|++++|+++...+... .++.+
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l 223 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAG 223 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHT
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcC
Confidence 99999999999999999999999999999999999998753 2 2335789999999999999974322111 13567
Q ss_pred CCCcEEEccccccCCCCCcccCCC---CCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccce
Q 041438 255 PQLSLLDVSINNITGNIPFEIGES---PQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEY 331 (752)
Q Consensus 255 ~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 331 (752)
++|++|+|++|+|++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 899999999999999888877776 69999999999999 5676664 6888888888888864 32 566777777
Q ss_pred eecccccccc
Q 041438 332 LDLSANHLSN 341 (752)
Q Consensus 332 L~Ls~N~l~~ 341 (752)
|+|++|+|+.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 7777777764
No 333
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.92 E-value=2.2e-26 Score=261.99 Aligned_cols=162 Identities=19% Similarity=0.102 Sum_probs=110.8
Q ss_pred eeccCCceEEEEEE-eCCCcEEEEEccCCCCCC-----------------------------------CccccCCceEEE
Q 041438 508 CIGKGGHGSVYIAR-VPSGEIFAVKKFHSPLPD-----------------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 508 ~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-----------------------------------~~~~~~~~~~lV 551 (752)
..+.|+.|.+..++ .-.|+.||||.+.+.... .++++.+..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 45677777777766 457999999998654211 456778899999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
|||++|++|.+++...+ +++.. +|+.||+.||+|+|++ |||||||||+|||+++++.+||+|||+|+....
T Consensus 321 MEyv~G~~L~d~i~~~~---~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE---EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp EECCCSEEHHHHHHTTC---CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred EecCCCCcHHHHHHhCC---CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 99999999999998654 34443 5899999999999999 999999999999999999999999999998766
Q ss_pred CCCCcccccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCCc
Q 041438 632 DSSNWSKLAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPR 679 (752)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~pf 679 (752)
........+||+.|||||++.+. +..++|+||+|++.+++.++..++
T Consensus 392 ~~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 392 DCSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp --CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccchh
Confidence 55556667999999999998764 667899999999988876665553
No 334
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=1.1e-24 Score=221.01 Aligned_cols=183 Identities=18% Similarity=0.185 Sum_probs=110.2
Q ss_pred CCCeeecCCCcccccCCcccccccccceeeccCcc-cCCCCCcccCCCCCCcEEEccC-CCCCCcCCcCccCCCcceEEe
Q 041438 134 KLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQ-LNGSIPHEVGQLNFLNHLILDS-NFLGGSIPRSLSNFTNLVFLY 211 (752)
Q Consensus 134 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ 211 (752)
+|++|+|++|+|+++.+..|.++++|++|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 67777777777777766677777777777777775 7666666777777777777776 777766666777777777777
Q ss_pred eccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEcccc-ccCCCCCcccCCCCCCC-EEecCCC
Q 041438 212 LYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSIN-NITGNIPFEIGESPQLQ-YLDLSSN 289 (752)
Q Consensus 212 L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~Ls~N 289 (752)
|++|++++ +|. |.++++|+ .|++|++++| ++++..+..|..+++|+ +|++++|
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~-----------------------~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n 166 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTD-----------------------IFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNN 166 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCC-----------------------SEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSC
T ss_pred CCCCCCcc-ccc-cccccccc-----------------------cccEEECCCCcchhhcCcccccchhcceeEEEcCCC
Confidence 77777764 333 33333222 1226666666 66655555566666666 6666666
Q ss_pred cCcCCCCccccCCcccCEEEccCCc-CcccCCcccCCC-cccceeeccccccccc
Q 041438 290 YIVGEIPTQLGNIIYLNRISLSGNK-LSGRIPGELGSL-INLEYLDLSANHLSNF 342 (752)
Q Consensus 290 ~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~ 342 (752)
.++...+..|.. ++|+.|++++|+ +++..+..|.++ ++|++|+|++|+++++
T Consensus 167 ~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l 220 (239)
T 2xwt_C 167 GFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL 220 (239)
T ss_dssp CCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC
T ss_pred CCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC
Confidence 665322223332 455555555552 544444444444 4444444444444443
No 335
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.92 E-value=2.3e-26 Score=245.97 Aligned_cols=103 Identities=21% Similarity=0.201 Sum_probs=55.0
Q ss_pred CEEECCCCcccccCCccCcCC--CCCCeeecCCCcccccCCcccccccccceeeccCcccCCC-CCcccCCCCCCcEEEc
Q 041438 112 AYLDLYNNELFDIIPPQISNL--SKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGS-IPHEVGQLNFLNHLIL 188 (752)
Q Consensus 112 ~~L~L~~n~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L 188 (752)
+.+++++|.+. +..+..+ ++++.|++++|.+++..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|
T Consensus 50 ~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L 125 (336)
T 2ast_B 50 QTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSL 125 (336)
T ss_dssp SEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEEC
T ss_pred eeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeC
Confidence 44555555543 3344444 5555555555555554443 33455555555555555543 4445555555555555
Q ss_pred cCCCCCCcCCcCccCCCcceEEeeccc-ccc
Q 041438 189 DSNFLGGSIPRSLSNFTNLVFLYLYNN-SFS 218 (752)
Q Consensus 189 ~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~ 218 (752)
++|++++..|..++.+++|++|+|++| .++
T Consensus 126 ~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~ 156 (336)
T 2ast_B 126 EGLRLSDPIVNTLAKNSNLVRLNLSGCSGFS 156 (336)
T ss_dssp TTCBCCHHHHHHHTTCTTCSEEECTTCBSCC
T ss_pred cCcccCHHHHHHHhcCCCCCEEECCCCCCCC
Confidence 555555555555555555555555555 344
No 336
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.91 E-value=2.3e-27 Score=274.02 Aligned_cols=203 Identities=12% Similarity=0.059 Sum_probs=132.2
Q ss_pred CCCCCCEEECCCCcccccCCccCcCC--CCCCeeecCCCc-ccc-cCCcccccccccceeeccCcccCCC----CCcccC
Q 041438 107 SFPHLAYLDLYNNELFDIIPPQISNL--SKLEYLDFLTNK-LSG-HIPSEISLLTHLTILHISRNQLNGS----IPHEVG 178 (752)
Q Consensus 107 ~l~~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~L~~N~-l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~ 178 (752)
.+++|++|+|++|.+++..+..+..+ ++|++|+|++|. ++. .++....++++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 67888899998888877666666653 448899988876 221 1222334778999999999988765 333456
Q ss_pred CCCCCcEEEccCCCCCC----cCCcCccCCCcceEEeeccccccccccccccCccccccccccccccC-CCcCCCCCCCC
Q 041438 179 QLNFLNHLILDSNFLGG----SIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLN-GAIPLSIDWGR 253 (752)
Q Consensus 179 ~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~-~~~~~~~~~~~ 253 (752)
.+++|++|+|++|.+++ .++..+.++++|++|+|++|.+.+ +|..+.++++|++|+++..... ...+....+..
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhc
Confidence 77889999999999873 344456678899999999998886 5677888888888888753222 11111223445
Q ss_pred CCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCC-ccccCCcccCEEEcc
Q 041438 254 CPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIP-TQLGNIIYLNRISLS 311 (752)
Q Consensus 254 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls 311 (752)
+++|+.|+++++. .+.+|..+..+++|++|+|++|.+++... ..+..+++|+.|+++
T Consensus 269 ~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~ 326 (592)
T 3ogk_B 269 PRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR 326 (592)
T ss_dssp CTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred cccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc
Confidence 5666666666542 23445555566666666666666543322 223455555555555
No 337
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=2.2e-24 Score=218.87 Aligned_cols=68 Identities=13% Similarity=0.211 Sum_probs=38.8
Q ss_pred ccceeeccCcccCCCCCcccCCCCCCcEEEccCCC-CCCcCCcCccCCCcceEEeecc-ccccccccccc
Q 041438 158 HLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNF-LGGSIPRSLSNFTNLVFLYLYN-NSFSGSIPQQI 225 (752)
Q Consensus 158 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~ 225 (752)
+|++|+|++|+|++..+..|.++++|++|+|++|+ ++.+.+..|.++++|++|+|++ |++++..+..|
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 56666666666665555556666666666666664 5555555555566666666655 55554433333
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=1.1e-26 Score=253.48 Aligned_cols=186 Identities=22% Similarity=0.317 Sum_probs=106.5
Q ss_pred CCCCcEEEccccccCC----CCCcccCCCCCCCEEecCCCcCcCCCCcccc----CC---------cccCEEEccCCcCc
Q 041438 254 CPQLSLLDVSINNITG----NIPFEIGESPQLQYLDLSSNYIVGEIPTQLG----NI---------IYLNRISLSGNKLS 316 (752)
Q Consensus 254 l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l---------~~L~~L~Ls~N~l~ 316 (752)
+++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++
T Consensus 93 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~ 172 (386)
T 2ca6_A 93 CPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLE 172 (386)
T ss_dssp CTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCT
T ss_pred CCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCC
Confidence 3444455555555444 2344444555555555555555433222222 22 55666666666654
Q ss_pred -ccCC---cccCCCcccceeecccccccc-----ccchhhcccccccEEEcCCCcCc----cccchhccccccCCeeecC
Q 041438 317 -GRIP---GELGSLINLEYLDLSANHLSN-----FVLESLGSLVKLYYLNLSHNKLS----QQIPIELDNLIHLSELDLS 383 (752)
Q Consensus 317 -~~~p---~~~~~l~~L~~L~Ls~N~l~~-----~~~~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls 383 (752)
+.++ ..+..+++|++|+|++|.++. ..+..+..+++|+.|+|++|.++ +.+|..+..+++|++|+|+
T Consensus 173 ~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~ 252 (386)
T 2ca6_A 173 NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLN 252 (386)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECT
T ss_pred cHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECC
Confidence 2222 244455666666666666652 23335666666777777777664 4556666666777777777
Q ss_pred CccCCCC----CCcccc--cccccceEEccCCcCCc----CCchhh-hccCCCcEEEccCCcccCcC
Q 041438 384 HNFLGEK----ISSRIC--RMESLEKLNLSYNNLSG----LIPRCF-EELHGLLHIDISYNKLEGHI 439 (752)
Q Consensus 384 ~N~l~~~----~~~~~~--~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~L~ls~N~l~~~~ 439 (752)
+|.+++. ++..+. .+++|+.|+|++|.+++ .+|..+ .++++|++|++++|++++..
T Consensus 253 ~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 253 DCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp TCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 7776654 344442 26777777777777776 356555 55677777777777776543
No 339
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.91 E-value=1.9e-24 Score=214.28 Aligned_cols=186 Identities=26% Similarity=0.292 Sum_probs=153.3
Q ss_pred CCCcccceeeCCCCCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCC
Q 041438 71 SLCTWSGIHCNHAGRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIP 150 (752)
Q Consensus 71 ~~c~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 150 (752)
..|.|.+|.|...+. + +....-.++|++|+|++|+|+++.+..|+++++|++|+|++|+++++.+
T Consensus 5 C~C~~~~v~c~~~~l-~--------------~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (208)
T 2o6s_A 5 CSCSGTTVECYSQGR-T--------------SVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPN 69 (208)
T ss_dssp CEEETTEEECCSSCC-S--------------SCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred CEECCCEEEecCCCc-c--------------CCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccCh
Confidence 458999999975431 1 1112234689999999999999888889999999999999999998888
Q ss_pred cccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccc
Q 041438 151 SEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKS 230 (752)
Q Consensus 151 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 230 (752)
..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++
T Consensus 70 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 149 (208)
T 2o6s_A 70 GVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS 149 (208)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred hhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCC
Confidence 88999999999999999999888888999999999999999999888888999999999999999999877777888888
Q ss_pred cccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCC
Q 041438 231 LFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQ 280 (752)
Q Consensus 231 L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 280 (752)
|+.|++++|.+.+ .+++|+.|+++.|+++|.+|..++.++.
T Consensus 150 L~~L~l~~N~~~~---------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 150 LQYIWLHDNPWDC---------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CCEEECCSCCBCC---------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ccEEEecCCCeec---------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 8877777776653 3456677777777777777766665543
No 340
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=1.1e-26 Score=253.44 Aligned_cols=257 Identities=22% Similarity=0.219 Sum_probs=142.2
Q ss_pred CCccCcCCCCCCeeecCCCcccccCC----cccccccccceeeccCc---ccCCCCCccc-------CCCCCCcEEEccC
Q 041438 125 IPPQISNLSKLEYLDFLTNKLSGHIP----SEISLLTHLTILHISRN---QLNGSIPHEV-------GQLNFLNHLILDS 190 (752)
Q Consensus 125 ~p~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~L~~ 190 (752)
++..+..+++|++|+|++|+|++..+ ..|..+++|++|+|++| ++++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 45556666777777777777765533 33556777777777774 3444455444 6778888888888
Q ss_pred CCCCC----cCCcCccCCCcceEEeeccccccccccccccC-ccccccccccccccCCCcCCCCCCCCCCCCcEEEcccc
Q 041438 191 NFLGG----SIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGN-LKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSIN 265 (752)
Q Consensus 191 N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N 265 (752)
|++++ .+|..+.++++|++|+|++|.|+...+..+.. +..+ ..|++.+ ..++|++|++++|
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l-----~~~~~~~---------~~~~L~~L~L~~n 169 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQEL-----AVNKKAK---------NAPPLRSIICGRN 169 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHH-----HHHHHHH---------TCCCCCEEECCSS
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHH-----hhhhhcc---------cCCCCcEEECCCC
Confidence 88887 46777888889999999999887555544433 1111 1122211 1145666666666
Q ss_pred ccC-CCCC---cccCCCCCCCEEecCCCcCc--C---CCCccccCCcccCEEEccCCcCc----ccCCcccCCCccccee
Q 041438 266 NIT-GNIP---FEIGESPQLQYLDLSSNYIV--G---EIPTQLGNIIYLNRISLSGNKLS----GRIPGELGSLINLEYL 332 (752)
Q Consensus 266 ~l~-~~~p---~~~~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L 332 (752)
+++ +.+| ..+..+++|++|+|++|.|+ | ..|..+..+++|+.|+|++|.++ +.+|..+..+++|++|
T Consensus 170 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L 249 (386)
T 2ca6_A 170 RLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLREL 249 (386)
T ss_dssp CCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEE
T ss_pred CCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEE
Confidence 665 2333 24445556666666666654 1 22334445555555555555553 3334444444444444
Q ss_pred eccccccccccchhhcccccccEEEcCCCcCccccchhcc--ccccCCeeecCCccCCC----CCCccc-ccccccceEE
Q 041438 333 DLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELD--NLIHLSELDLSHNFLGE----KISSRI-CRMESLEKLN 405 (752)
Q Consensus 333 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~----~~~~~~-~~l~~L~~L~ 405 (752)
+|++|.+++..... ++..+. .+++|+.|+|++|.+++ .+|..+ .++++|++|+
T Consensus 250 ~L~~n~i~~~~~~~--------------------l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~ 309 (386)
T 2ca6_A 250 GLNDCLLSARGAAA--------------------VVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLE 309 (386)
T ss_dssp ECTTCCCCHHHHHH--------------------HHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEE
T ss_pred ECCCCCCchhhHHH--------------------HHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEE
Confidence 44444444431110 233332 24555555555555544 233333 3355566666
Q ss_pred ccCCcCCcCC
Q 041438 406 LSYNNLSGLI 415 (752)
Q Consensus 406 L~~N~l~~~~ 415 (752)
|++|++++..
T Consensus 310 l~~N~l~~~~ 319 (386)
T 2ca6_A 310 LNGNRFSEED 319 (386)
T ss_dssp CTTSBSCTTS
T ss_pred ccCCcCCcch
Confidence 6666665554
No 341
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=1.5e-25 Score=239.63 Aligned_cols=251 Identities=18% Similarity=0.174 Sum_probs=141.6
Q ss_pred CCCeeecCCCcccccCCcccccc--cccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCc-CCcCccCCCcceEE
Q 041438 134 KLEYLDFLTNKLSGHIPSEISLL--THLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGS-IPRSLSNFTNLVFL 210 (752)
Q Consensus 134 ~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L 210 (752)
.++.|++++|.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 3678899888876 4566666 7888888888888866554 44577777777777777654 56666667777777
Q ss_pred eeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEcccc-ccCCC-CCcccCCCCCCCEEecCC
Q 041438 211 YLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSIN-NITGN-IPFEIGESPQLQYLDLSS 288 (752)
Q Consensus 211 ~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~ 288 (752)
+|++|++++..+..++.+ ++|++|++++| .+++. ++..+..+++|++|++++
T Consensus 124 ~L~~~~l~~~~~~~l~~~--------------------------~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~ 177 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKN--------------------------SNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSW 177 (336)
T ss_dssp ECTTCBCCHHHHHHHTTC--------------------------TTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCC
T ss_pred eCcCcccCHHHHHHHhcC--------------------------CCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCC
Confidence 777776665555444333 33445555554 34331 333344455555555555
Q ss_pred C-cCcCC-CCccccCCcccCEEEccCCcCcccCCcccCCCcccceeecccc--ccc-cccchhhcccccccEEEcCCCc-
Q 041438 289 N-YIVGE-IPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSAN--HLS-NFVLESLGSLVKLYYLNLSHNK- 362 (752)
Q Consensus 289 N-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N--~l~-~~~~~~~~~l~~L~~L~Ls~N~- 362 (752)
| .+++. ++..+..++ .+|++|+|++| .++ +..+..+..+++|+.|++++|.
T Consensus 178 ~~~l~~~~~~~~~~~l~-----------------------~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~ 234 (336)
T 2ast_B 178 CFDFTEKHVQVAVAHVS-----------------------ETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVM 234 (336)
T ss_dssp CTTCCHHHHHHHHHHSC-----------------------TTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTT
T ss_pred CCCcChHHHHHHHHhcc-----------------------cCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCc
Confidence 5 44432 233344444 04444444444 232 2234445555566666666665
Q ss_pred CccccchhccccccCCeeecCCcc-CCCCCCcccccccccceEEccCCcCCcCCchhhhccC-CCcEEEccCCcccCcCC
Q 041438 363 LSQQIPIELDNLIHLSELDLSHNF-LGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELH-GLLHIDISYNKLEGHIP 440 (752)
Q Consensus 363 l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~~~~p 440 (752)
+++..+..+..+++|++|+|++|. +.......+..+++|+.|++++| ++. ..+..+. .+..|++++|++++..|
T Consensus 235 l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~ 310 (336)
T 2ast_B 235 LKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIAR 310 (336)
T ss_dssp CCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTC
T ss_pred CCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccC
Confidence 454555555566666666666663 22111124555666666766666 322 2233332 25555567777777666
Q ss_pred C
Q 041438 441 N 441 (752)
Q Consensus 441 ~ 441 (752)
.
T Consensus 311 ~ 311 (336)
T 2ast_B 311 P 311 (336)
T ss_dssp S
T ss_pred C
Confidence 4
No 342
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=2.1e-23 Score=213.28 Aligned_cols=180 Identities=24% Similarity=0.284 Sum_probs=128.2
Q ss_pred CcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccc
Q 041438 257 LSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSA 336 (752)
Q Consensus 257 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 336 (752)
.++++++++.++. +|..+. ++++.|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 16 ~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 4466666666663 343333 4677777777777766666677777777777777777776666677777777777777
Q ss_pred cccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCc
Q 041438 337 NHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIP 416 (752)
Q Consensus 337 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 416 (752)
|+++++++..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++.++
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 77777777777777777777777777776666667777777777777777777666677777777777777777777777
Q ss_pred hhhhccCCCcEEEccCCcccCcC
Q 041438 417 RCFEELHGLLHIDISYNKLEGHI 439 (752)
Q Consensus 417 ~~~~~l~~L~~L~ls~N~l~~~~ 439 (752)
..|..+++|+.|++++|++++..
T Consensus 173 ~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 173 GAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp TTTTTCTTCCEEECCSCCBCTTS
T ss_pred HHHhCCCCCCEEEeeCCceeCCc
Confidence 77777777777777777776653
No 343
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.90 E-value=1.7e-23 Score=224.87 Aligned_cols=223 Identities=17% Similarity=0.071 Sum_probs=127.4
Q ss_pred CCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCC-cccccccccce-eeccCcccCCCCCcccCCCCCCcEE
Q 041438 109 PHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIP-SEISLLTHLTI-LHISRNQLNGSIPHEVGQLNFLNHL 186 (752)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L 186 (752)
+++++|+|++|+|+.+.+.+|+++++|++|+|++|++.+.+| .+|.++++|++ +.++.|+|+++.|..|.++++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 467777777777777666777777777777777777655443 45677776654 5556677776667777777777777
Q ss_pred EccCCCCCCcCCcCccCCCcceEEeecc-ccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEcccc
Q 041438 187 ILDSNFLGGSIPRSLSNFTNLVFLYLYN-NSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSIN 265 (752)
Q Consensus 187 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N 265 (752)
++++|+|++..+..+....++..|++.+ |++....+..|..+. ..++.|+|++|
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~-------------------------~~l~~L~L~~N 164 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS-------------------------FESVILWLNKN 164 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB-------------------------SSCEEEECCSS
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcc-------------------------hhhhhhccccc
Confidence 7777777766666666666666776654 445544333433322 23445555555
Q ss_pred ccCCCCCcccCCCCCCCEEecCC-CcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccc
Q 041438 266 NITGNIPFEIGESPQLQYLDLSS-NYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVL 344 (752)
Q Consensus 266 ~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 344 (752)
+|+.+.+..| ..++|+.|++++ |.++...++.|.++++|+.|+|++|+|+..++..|.++++|+.+++ +.++..+
T Consensus 165 ~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~~lP- 240 (350)
T 4ay9_X 165 GIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLKKLP- 240 (350)
T ss_dssp CCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCCCCC-
T ss_pred cccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcCcCC-
Confidence 5554333322 334555555543 4444333345555555555555555555444444444444443333 2233322
Q ss_pred hhhcccccccEEEcCCC
Q 041438 345 ESLGSLVKLYYLNLSHN 361 (752)
Q Consensus 345 ~~~~~l~~L~~L~Ls~N 361 (752)
.+..+++|+.++++++
T Consensus 241 -~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 241 -TLEKLVALMEASLTYP 256 (350)
T ss_dssp -CTTTCCSCCEEECSCH
T ss_pred -CchhCcChhhCcCCCC
Confidence 2445555555555443
No 344
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.90 E-value=2.2e-23 Score=224.03 Aligned_cols=241 Identities=20% Similarity=0.148 Sum_probs=110.8
Q ss_pred eeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCC-cCccCCCcceE-Eeecc
Q 041438 137 YLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIP-RSLSNFTNLVF-LYLYN 214 (752)
Q Consensus 137 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L~~ 214 (752)
+++.++|+++ .+|..+ .++|++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+| .+|.++++|++ +.+++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 4555555555 334333 2345555555555554433445555555555555555433222 34444444432 33334
Q ss_pred ccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCC
Q 041438 215 NSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGE 294 (752)
Q Consensus 215 N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 294 (752)
|+|++..|+.|.+ +++|++|++++|+|++..+..+....++..|++.+
T Consensus 90 N~l~~l~~~~f~~--------------------------l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~------ 137 (350)
T 4ay9_X 90 NNLLYINPEAFQN--------------------------LPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQD------ 137 (350)
T ss_dssp TTCCEECTTSBCC--------------------------CTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEES------
T ss_pred CcccccCchhhhh--------------------------ccccccccccccccccCCchhhcccchhhhhhhcc------
Confidence 4444333333322 23333444444444444444444444444444432
Q ss_pred CCccccCCcccCEEEccCCcCcccCCcccCCCc-ccceeeccccccccccchhhcccccccEEEcCC-CcCccccchhcc
Q 041438 295 IPTQLGNIIYLNRISLSGNKLSGRIPGELGSLI-NLEYLDLSANHLSNFVLESLGSLVKLYYLNLSH-NKLSQQIPIELD 372 (752)
Q Consensus 295 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~ 372 (752)
.|++....+..|..+. .++.|+|++|+|+.+.+..|. ..+|+.|++++ |.++.+.+..|.
T Consensus 138 -----------------~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~ 199 (350)
T 4ay9_X 138 -----------------NINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFN-GTQLDELNLSDNNNLEELPNDVFH 199 (350)
T ss_dssp -----------------CTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSST-TEEEEEEECTTCTTCCCCCTTTTT
T ss_pred -----------------ccccccccccchhhcchhhhhhccccccccCCChhhcc-ccchhHHhhccCCcccCCCHHHhc
Confidence 1334434444444443 355555555555554444332 23455555543 444444344555
Q ss_pred ccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCchhhhccCCCcEEEccCCc
Q 041438 373 NLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNK 434 (752)
Q Consensus 373 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 434 (752)
++++|++|||++|+|+...+..|.++++|+.+++ ++++.+ | .+..+++|+.++++++.
T Consensus 200 ~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~~l-P-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 200 GASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLKKL-P-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp TEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCCCC-C-CTTTCCSCCEEECSCHH
T ss_pred cCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcCcC-C-CchhCcChhhCcCCCCc
Confidence 5556666666666555554444433333332222 223332 3 25666666666665543
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=1.8e-23 Score=220.46 Aligned_cols=207 Identities=26% Similarity=0.299 Sum_probs=105.1
Q ss_pred eeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeecccc
Q 041438 137 YLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNS 216 (752)
Q Consensus 137 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 216 (752)
.+.+..+.++..++ +..+++|++|++++|.++. +| .+..+++|++|+|++|++++..+ +.++++|++|+|++|+
T Consensus 23 ~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~ 96 (308)
T 1h6u_A 23 KIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNP 96 (308)
T ss_dssp HHHTTCSSTTSEEC--HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCC
T ss_pred HHHhCCCCcCceec--HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCc
Confidence 33444444443322 3455566666666666553 23 45555666666666666654433 5556666666666665
Q ss_pred ccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCC
Q 041438 217 FSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIP 296 (752)
Q Consensus 217 l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 296 (752)
+++. + .+ ..+++|++|++++|++++.. .+..+++|++|++++|.+++..+
T Consensus 97 l~~~-~-~~--------------------------~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~ 146 (308)
T 1h6u_A 97 LKNV-S-AI--------------------------AGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP 146 (308)
T ss_dssp CSCC-G-GG--------------------------TTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG
T ss_pred CCCc-h-hh--------------------------cCCCCCCEEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc
Confidence 5432 1 12 23344555555555555432 15555566666666666554332
Q ss_pred ccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhcccccccEEEcCCCcCccccchhcccccc
Q 041438 297 TQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIH 376 (752)
Q Consensus 297 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 376 (752)
+..+++|+.|++++|++++..+ +..+++|++|+|++|.+++..+ +..+++|++|+|++|++++..+ +..+++
T Consensus 147 --l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~ 218 (308)
T 1h6u_A 147 --LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSN 218 (308)
T ss_dssp --GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTT
T ss_pred --ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCC
Confidence 5555555555555555554322 5555555555555555555433 4455555555555555543332 444444
Q ss_pred CCeeecCCccC
Q 041438 377 LSELDLSHNFL 387 (752)
Q Consensus 377 L~~L~Ls~N~l 387 (752)
|+.|+|++|++
T Consensus 219 L~~L~l~~N~i 229 (308)
T 1h6u_A 219 LFIVTLTNQTI 229 (308)
T ss_dssp CCEEEEEEEEE
T ss_pred CCEEEccCCee
Confidence 44444444444
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=1.2e-23 Score=221.96 Aligned_cols=198 Identities=23% Similarity=0.331 Sum_probs=146.7
Q ss_pred cCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCc
Q 041438 105 FSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLN 184 (752)
Q Consensus 105 f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 184 (752)
+..+++|++|++++|+++.+ | .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++. ..+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCC
Confidence 34567788888888888764 3 57778888888888888876544 77788888888888887753 3577777888
Q ss_pred EEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccc
Q 041438 185 HLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSI 264 (752)
Q Consensus 185 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~ 264 (752)
+|+|++|++++.. .+.++++|++|+|++|++++..+ ++ .+++|+.|++++
T Consensus 111 ~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~--------------------------~l~~L~~L~l~~ 160 (308)
T 1h6u_A 111 TLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LA--------------------------GLTNLQYLSIGN 160 (308)
T ss_dssp EEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GG--------------------------GCTTCCEEECCS
T ss_pred EEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--cc--------------------------CCCCccEEEccC
Confidence 8888888877643 27777777777777777765432 33 445666777777
Q ss_pred cccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccc
Q 041438 265 NNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVL 344 (752)
Q Consensus 265 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 344 (752)
|++++..+ +..+++|+.|++++|.+++..+ +..+++|+.|+|++|++++..+ +..+++|++|+|++|.+++.+.
T Consensus 161 n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~~~ 234 (308)
T 1h6u_A 161 AQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPV 234 (308)
T ss_dssp SCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECCCE
T ss_pred CcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecCCe
Confidence 77776444 7778888888888888876544 7788888888888888886653 7888899999999999877543
No 347
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.89 E-value=7.6e-26 Score=261.29 Aligned_cols=349 Identities=15% Similarity=0.137 Sum_probs=198.2
Q ss_pred CCCCCCEEECCCCcccccCCccCc-CCCCCCeeecCCC-ccccc-CCcccccccccceeeccCcccCCCCCcccC----C
Q 041438 107 SFPHLAYLDLYNNELFDIIPPQIS-NLSKLEYLDFLTN-KLSGH-IPSEISLLTHLTILHISRNQLNGSIPHEVG----Q 179 (752)
Q Consensus 107 ~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~ 179 (752)
.+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 445555555555555544444443 4555555555555 33321 222233555555555555555543332222 3
Q ss_pred CCCCcEEEccCCC--CCCc-CCcCccCCCcceEEeeccc-cccccccccccCccccccccccccc---------------
Q 041438 180 LNFLNHLILDSNF--LGGS-IPRSLSNFTNLVFLYLYNN-SFSGSIPQQIGNLKSLFDMKLCINQ--------------- 240 (752)
Q Consensus 180 l~~L~~L~L~~N~--l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~l~l~~N~--------------- 240 (752)
+++|++|+|++|. ++.. ++..+.++++|++|+|++| .+.+ +|..+.++++|++|+++.+.
T Consensus 183 ~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l 261 (594)
T 2p1m_B 183 YTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVAL 261 (594)
T ss_dssp CCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHH
T ss_pred CCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHH
Confidence 4455555555554 1100 1111123455555555555 2222 44444444445444432221
Q ss_pred -----------cCCCcCCCC--CCCCCCCCcEEEccccccCCCCCc-ccCCCCCCCEEecCCCcCcCC-CCccccCCccc
Q 041438 241 -----------LNGAIPLSI--DWGRCPQLSLLDVSINNITGNIPF-EIGESPQLQYLDLSSNYIVGE-IPTQLGNIIYL 305 (752)
Q Consensus 241 -----------l~~~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L 305 (752)
+.......+ .+..+++|+.|++++|.+++.... .+..+++|++|++++| +... ++.....+++|
T Consensus 262 ~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L 340 (594)
T 2p1m_B 262 SGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDL 340 (594)
T ss_dssp HTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTC
T ss_pred hcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCC
Confidence 111000000 012467899999999987654332 3567889999999988 4322 22333457888
Q ss_pred CEEEcc---------CCcCcccCCcccC-CCcccceeeccccccccccchhhc-ccccccEEEcC--C----CcCccc--
Q 041438 306 NRISLS---------GNKLSGRIPGELG-SLINLEYLDLSANHLSNFVLESLG-SLVKLYYLNLS--H----NKLSQQ-- 366 (752)
Q Consensus 306 ~~L~Ls---------~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls--~----N~l~~~-- 366 (752)
++|+++ .|.+++.....+. ++++|++|+++.|.+++.....+. .+++|+.|+|+ + |.++..
T Consensus 341 ~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~ 420 (594)
T 2p1m_B 341 RELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPL 420 (594)
T ss_dssp CEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCT
T ss_pred CEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCch
Confidence 999884 3455433222232 477888888888888877666665 58889999988 4 566532
Q ss_pred ---cchhccccccCCeeecCCccCCCCCCccccc-ccccceEEccCCcCCcCCchhh-hccCCCcEEEccCCcccCcCCC
Q 041438 367 ---IPIELDNLIHLSELDLSHNFLGEKISSRICR-MESLEKLNLSYNNLSGLIPRCF-EELHGLLHIDISYNKLEGHIPN 441 (752)
Q Consensus 367 ---~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~ls~N~l~~~~p~ 441 (752)
++..+..+++|+.|+|++ .+++.....++. +++|+.|+|++|.+++..+..+ ..+++|+.|++++|++++..+.
T Consensus 421 ~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~ 499 (594)
T 2p1m_B 421 DIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALL 499 (594)
T ss_dssp HHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHH
T ss_pred hhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHH
Confidence 223367788899999977 666655555555 7889999999998877655555 6688899999999888543221
Q ss_pred --CcccCCCCcccccCCCC
Q 041438 442 --STTFRDAPLEALQGNKG 458 (752)
Q Consensus 442 --~~~~~~~~~~~~~~n~~ 458 (752)
...+..+....+.+|+.
T Consensus 500 ~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 500 ANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HTGGGGGGSSEEEEESSCC
T ss_pred HHHHhCCCCCEEeeeCCCC
Confidence 11233444455555543
No 348
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.89 E-value=4e-23 Score=233.87 Aligned_cols=188 Identities=26% Similarity=0.342 Sum_probs=117.2
Q ss_pred CCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEcc
Q 041438 110 HLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILD 189 (752)
Q Consensus 110 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 189 (752)
+|++|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. |.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 46677777887777 455442 67888888888887 455 346778888888888876 555 554 77888888
Q ss_pred CCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCC
Q 041438 190 SNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITG 269 (752)
Q Consensus 190 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 269 (752)
+|+|++ +|. .+++|+.|+|++|+|++ +|. .+ ++|+.|+|++|+|++
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l--------------------------~~L~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LP--------------------------TSLEVLSVRNNQLTF 174 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CC--------------------------TTCCEEECCSSCCSC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cC--------------------------CCcCEEECCCCCCCC
Confidence 888776 444 56777777777777764 332 12 345566666666665
Q ss_pred CCCcccCCCCCCCEEecCCCcCcCCCCccccCCccc-------CEEEccCCcCcccCCcccCCCcccceeeccccccccc
Q 041438 270 NIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYL-------NRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNF 342 (752)
Q Consensus 270 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 342 (752)
+|. |. ++|++|+|++|.|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|.|++.
T Consensus 175 -lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~ 245 (571)
T 3cvr_A 175 -LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSR 245 (571)
T ss_dssp -CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHH
T ss_pred -cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCc
Confidence 343 43 66666666666666 3444 433 44 66666666665 3444455566666666666666665
Q ss_pred cchhhcccc
Q 041438 343 VLESLGSLV 351 (752)
Q Consensus 343 ~~~~~~~l~ 351 (752)
.|..+..+.
T Consensus 246 ~p~~l~~l~ 254 (571)
T 3cvr_A 246 IRESLSQQT 254 (571)
T ss_dssp HHHHHHHHH
T ss_pred CHHHHHHhh
Confidence 555555443
No 349
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.88 E-value=3.2e-25 Score=256.13 Aligned_cols=349 Identities=15% Similarity=0.084 Sum_probs=217.2
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCCEEECCCC-ccccc-CCccCcCCCCCCeeecCCCcccccCCcccc----ccc
Q 041438 84 GRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNN-ELFDI-IPPQISNLSKLEYLDFLTNKLSGHIPSEIS----LLT 157 (752)
Q Consensus 84 ~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l~ 157 (752)
..+..++|+++.+.+.....-...+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 356677777776665443322225778888888887 55442 334445778888888888887765544443 556
Q ss_pred ccceeeccCcc--cCCC-CCcccCCCCCCcEEEccCC-CCCCcCCcCccCCCcceEEeecccc-----------------
Q 041438 158 HLTILHISRNQ--LNGS-IPHEVGQLNFLNHLILDSN-FLGGSIPRSLSNFTNLVFLYLYNNS----------------- 216 (752)
Q Consensus 158 ~L~~L~Ls~N~--l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~----------------- 216 (752)
+|++|+|++|. ++.. ++..+..+++|++|+|++| .+++ +|..+..+++|+.|+++.+.
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~ 263 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSG 263 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHT
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhc
Confidence 88888888876 2110 1111234578888888887 4443 66667777778877754441
Q ss_pred ---------cc----ccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCC-CCcccCCCCCCC
Q 041438 217 ---------FS----GSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGN-IPFEIGESPQLQ 282 (752)
Q Consensus 217 ---------l~----~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~ 282 (752)
+. +.++..+..+++|++|++++|.+++..... ....+++|+.|++++| ++.. ++.....+++|+
T Consensus 264 ~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~-~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~ 341 (594)
T 2p1m_B 264 CKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVK-LLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLR 341 (594)
T ss_dssp CTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHH-HHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCC
T ss_pred CCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHH-HHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCC
Confidence 11 112233335677788888888765432211 1346778888888877 4322 222223467888
Q ss_pred EEec---------CCCcCcCCCCcccc-CCcccCEEEccCCcCcccCCcccC-CCcccceeecc--c----ccccccc--
Q 041438 283 YLDL---------SSNYIVGEIPTQLG-NIIYLNRISLSGNKLSGRIPGELG-SLINLEYLDLS--A----NHLSNFV-- 343 (752)
Q Consensus 283 ~L~L---------s~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~~-- 343 (752)
+|++ +.|.+++.....+. ++++|+.|.++.|.+++..+..+. .+++|+.|+|+ + |.+++.+
T Consensus 342 ~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~ 421 (594)
T 2p1m_B 342 ELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLD 421 (594)
T ss_dssp EEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTH
T ss_pred EEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchh
Confidence 8877 33445433222232 367788888888887765554444 46788888888 4 5565322
Q ss_pred ---chhhcccccccEEEcCCCcCccccchhccc-cccCCeeecCCccCCCCCCccc-ccccccceEEccCCcCCcCCch-
Q 041438 344 ---LESLGSLVKLYYLNLSHNKLSQQIPIELDN-LIHLSELDLSHNFLGEKISSRI-CRMESLEKLNLSYNNLSGLIPR- 417 (752)
Q Consensus 344 ---~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p~- 417 (752)
+..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++.....+ ..+++|++|+|++|.+++..+.
T Consensus 422 ~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~ 500 (594)
T 2p1m_B 422 IGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLA 500 (594)
T ss_dssp HHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHH
T ss_pred hHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHH
Confidence 22356677888888876 666555555555 7788888888888766544444 5578888888888888654443
Q ss_pred hhhccCCCcEEEccCCccc
Q 041438 418 CFEELHGLLHIDISYNKLE 436 (752)
Q Consensus 418 ~~~~l~~L~~L~ls~N~l~ 436 (752)
....+++|+.|++++|+++
T Consensus 501 ~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 501 NASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp TGGGGGGSSEEEEESSCCB
T ss_pred HHHhCCCCCEEeeeCCCCC
Confidence 3445778888888888763
No 350
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=5.1e-22 Score=224.83 Aligned_cols=189 Identities=24% Similarity=0.316 Sum_probs=123.0
Q ss_pred CCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeec
Q 041438 134 KLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLY 213 (752)
Q Consensus 134 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 213 (752)
+|+.|+|++|+|++ +|..+ +++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. |.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 66666666666665 44433 255666666666666 344 334556666666666665 444 443 56666666
Q ss_pred cccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcC
Q 041438 214 NNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVG 293 (752)
Q Consensus 214 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 293 (752)
+|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|.|++
T Consensus 129 ~N~l~~-lp~-----------------------------~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 129 NNQLTM-LPE-----------------------------LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF 174 (571)
T ss_dssp SSCCSC-CCC-----------------------------CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC
T ss_pred CCcCCC-CCC-----------------------------cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC
Confidence 665554 222 23567788888888886 444 56788888999888886
Q ss_pred CCCccccCCcccCEEEccCCcCcccCCcccCCCccc-------ceeeccccccccccchhhcccccccEEEcCCCcCccc
Q 041438 294 EIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINL-------EYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQ 366 (752)
Q Consensus 294 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 366 (752)
+|. |. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|+|+.+ |..+..+++|+.|+|++|+|++.
T Consensus 175 -lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~l-p~~l~~l~~L~~L~L~~N~l~~~ 245 (571)
T 3cvr_A 175 -LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITHI-PENILSLDPTCTIILEDNPLSSR 245 (571)
T ss_dssp -CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCCCC-CGGGGGSCTTEEEECCSSSCCHH
T ss_pred -cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcceec-CHHHhcCCCCCEEEeeCCcCCCc
Confidence 555 55 78888888888888 4555 554 66 8888888888764 44555578888888888888777
Q ss_pred cchhcccccc
Q 041438 367 IPIELDNLIH 376 (752)
Q Consensus 367 ~p~~~~~l~~ 376 (752)
+|..+..++.
T Consensus 246 ~p~~l~~l~~ 255 (571)
T 3cvr_A 246 IRESLSQQTA 255 (571)
T ss_dssp HHHHHHHHHH
T ss_pred CHHHHHHhhc
Confidence 7777766554
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=1e-21 Score=194.66 Aligned_cols=178 Identities=25% Similarity=0.191 Sum_probs=108.4
Q ss_pred CEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCC
Q 041438 112 AYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSN 191 (752)
Q Consensus 112 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 191 (752)
+.++.+++.++.+ |..+ .++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTSV-PTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccCC-CCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 3466777777664 3333 357788888888888777777777888888888888887666666777777777777777
Q ss_pred CCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCC
Q 041438 192 FLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNI 271 (752)
Q Consensus 192 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 271 (752)
++++..+..|.++++|++|+|++|+|++..+..|.+++ +|+.|++++|++++..
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~--------------------------~L~~L~l~~N~l~~~~ 140 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLT--------------------------QLKDLRLYQNQLKSVP 140 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT--------------------------TCCEEECCSSCCSCCC
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCC--------------------------cCCEEECCCCccceeC
Confidence 77766666677777777777777777655444444333 3444555555544444
Q ss_pred CcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCC
Q 041438 272 PFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGS 325 (752)
Q Consensus 272 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 325 (752)
+..+..+++|++|++++|.+.+ .+++|+.|+++.|+++|.+|..++.
T Consensus 141 ~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~ 187 (208)
T 2o6s_A 141 DGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGS 187 (208)
T ss_dssp TTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSS
T ss_pred HHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCcc
Confidence 4444445555555555554432 1223444444444444444444433
No 352
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=5.1e-21 Score=192.53 Aligned_cols=158 Identities=23% Similarity=0.254 Sum_probs=130.0
Q ss_pred CCCCcccceeeCCCCCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccC
Q 041438 70 ISLCTWSGIHCNHAGRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHI 149 (752)
Q Consensus 70 ~~~c~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 149 (752)
.+.|+|.+|.|...+ ++ .++. .-.++|++|+|++|+|+++.|..|.++++|++|+|++|+|+.+.
T Consensus 16 ~~~Cs~~~v~c~~~~-l~-----------~ip~---~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~ 80 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKR-HA-----------SVPA---GIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALP 80 (229)
T ss_dssp TCEEETTEEECTTSC-CS-----------SCCS---CCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCEEeCCEeEccCCC-cC-----------ccCC---CCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcC
Confidence 478999999997432 11 1221 12378999999999999999999999999999999999998887
Q ss_pred CcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCcc
Q 041438 150 PSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLK 229 (752)
Q Consensus 150 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 229 (752)
+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+.++++|++|+|++|+|++..+..|..++
T Consensus 81 ~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 159 (229)
T 3e6j_A 81 VGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLS 159 (229)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCC
Confidence 788899999999999999999888888999999999999999999 6788889999999999999999977666676666
Q ss_pred ccccccccccccCC
Q 041438 230 SLFDMKLCINQLNG 243 (752)
Q Consensus 230 ~L~~l~l~~N~l~~ 243 (752)
+|+.|++++|.+.+
T Consensus 160 ~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 160 SLTHAYLFGNPWDC 173 (229)
T ss_dssp TCCEEECTTSCBCT
T ss_pred CCCEEEeeCCCccC
Confidence 66655555555543
No 353
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.85 E-value=2e-22 Score=228.23 Aligned_cols=159 Identities=17% Similarity=0.219 Sum_probs=122.1
Q ss_pred ccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC--------------------------------CccccCCceEEE
Q 041438 504 DAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD--------------------------------NFCSHPRQSFIV 551 (752)
Q Consensus 504 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------------------~~~~~~~~~~lV 551 (752)
...+.||+|+||.||+|+. .++.+|+|+....... .++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 6788899875332110 223345677999
Q ss_pred EEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccC
Q 041438 552 YEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNL 631 (752)
Q Consensus 552 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~ 631 (752)
|||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+|||+++ .+||+|||+|+....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999864 458999999999999999 9999999999999998 999999999998754
Q ss_pred CCCC-------cccccCCCCccCcccccc--CCCCCccchhhHHHHHHHHHhCCCCc
Q 041438 632 DSSN-------WSKLAGTHGNVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPR 679 (752)
Q Consensus 632 ~~~~-------~~~~~gt~~y~aPE~~~~--~~~~~ksDIwSlGvil~elltg~~pf 679 (752)
.... .....||+.|||||++.. ..|+.++|+|+..+-..+-+.++.+|
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 3211 124589999999999886 56788899999999888888877775
No 354
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.84 E-value=1.7e-22 Score=236.99 Aligned_cols=221 Identities=18% Similarity=0.149 Sum_probs=107.4
Q ss_pred CCHHHHHHHHHHHHccccCCccccCCCCccccCCCCCCCCcccceeeCCCCCEEEEEcCCCCCcccccccccCCCCCCCE
Q 041438 34 NSTEEAHALVKWKASLEVHSRSLLHSWSLSFVNATKISLCTWSGIHCNHAGRVFGINLTSISLNGTLLEFSFSSFPHLAY 113 (752)
Q Consensus 34 ~~~~~~~aLl~fk~~~~~~~~~~l~sW~~~~~~~~~~~~c~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~ 113 (752)
....++++|+++..+........-..|. .+....+.|.++.+.. .+++.++|..+++... ....|+.
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~-------~~~~l~~ 195 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPT-----GDSTPSGTATNSAVST-PLTPKIELFANGKDEA-------NQALLQH 195 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCc-----CCCCccccCCCceecC-CccceEEeeCCCCCcc-------hhhHhhc
Confidence 3456899999998876544333344553 2223567899998874 6788888876666542 1123444
Q ss_pred EECCCCcccc---------cCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCc
Q 041438 114 LDLYNNELFD---------IIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLN 184 (752)
Q Consensus 114 L~L~~n~l~~---------~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 184 (752)
++|+.|.|.+ +.|..|..+++|+.|+|++|+|. .+|..+..+++|++|+|++|.|+ .+|..|+++++|+
T Consensus 196 l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~ 273 (727)
T 4b8c_D 196 KKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLR 273 (727)
T ss_dssp --------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCC
T ss_pred CccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCC
Confidence 5555555443 34667778888888888888877 55666667888888888888887 6777778888888
Q ss_pred EEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccc
Q 041438 185 HLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSI 264 (752)
Q Consensus 185 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~ 264 (752)
+|+|++|+|+ .+|..|++|++|++|+|++|.|+ .+|..|+++++|+.|+|++|.|++.+|..+.... ..+..|+|++
T Consensus 274 ~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~-~~~~~l~l~~ 350 (727)
T 4b8c_D 274 VLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKS-VTGLIFYLRD 350 (727)
T ss_dssp EEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHH-HHHHHHHHHH
T ss_pred EEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcc-hhhhHHhhcc
Confidence 8888888887 56777888888888888888776 5566677777666666666666655543321000 0111245555
Q ss_pred cccCCCCC
Q 041438 265 NNITGNIP 272 (752)
Q Consensus 265 N~l~~~~p 272 (752)
|.+++.+|
T Consensus 351 N~l~~~~p 358 (727)
T 4b8c_D 351 NRPEIPLP 358 (727)
T ss_dssp CCCCCCCC
T ss_pred CcccCcCc
Confidence 66555555
No 355
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=1.5e-20 Score=187.89 Aligned_cols=134 Identities=22% Similarity=0.266 Sum_probs=118.2
Q ss_pred CCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEc
Q 041438 109 PHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLIL 188 (752)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 188 (752)
++|++|+|++|+|+++.+..|.++++|++|+|++|+|+++.|..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 68999999999999988889999999999999999999999999999999999999999999777777899999999999
Q ss_pred cCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccC
Q 041438 189 DSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLN 242 (752)
Q Consensus 189 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~ 242 (752)
++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|++++|.+.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 999999999999999999999999999999877777776666665555555544
No 356
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.84 E-value=1e-20 Score=204.06 Aligned_cols=177 Identities=25% Similarity=0.248 Sum_probs=133.5
Q ss_pred cEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCcccc-CCcccCEEEccCCcCcccCCcccCCCcccceeeccc
Q 041438 258 SLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLG-NIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSA 336 (752)
Q Consensus 258 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 336 (752)
+.+++++|+|+. +|..+. +.++.|+|++|+|++..+..|. ++++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 467777777764 454432 3577788888888777777776 778888888888888877777788888888888888
Q ss_pred cccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCccc---ccccccceEEccCCcCCc
Q 041438 337 NHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRI---CRMESLEKLNLSYNNLSG 413 (752)
Q Consensus 337 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~L~~N~l~~ 413 (752)
|+|+++.+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 88887777778888888888888888877777788888888888888888877666655 557888888888888887
Q ss_pred CCchhhhccCC--CcEEEccCCcccC
Q 041438 414 LIPRCFEELHG--LLHIDISYNKLEG 437 (752)
Q Consensus 414 ~~p~~~~~l~~--L~~L~ls~N~l~~ 437 (752)
+.+..|..++. ++.|+|++|++..
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred cCHHHhhhccHhhcceEEecCCCccC
Confidence 77777777776 3677777777764
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=4.4e-21 Score=200.39 Aligned_cols=78 Identities=18% Similarity=0.264 Sum_probs=39.4
Q ss_pred CCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeecc
Q 041438 135 LEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYN 214 (752)
Q Consensus 135 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 214 (752)
+..+.+..+.+++..+ +..+++|+.|++++|.++.. + .+..+++|++|+|++|++++..+ +.++++|++|+|++
T Consensus 26 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 3344444444443322 34455555555555555533 2 25555555555555555554333 55555555555555
Q ss_pred cccc
Q 041438 215 NSFS 218 (752)
Q Consensus 215 N~l~ 218 (752)
|+++
T Consensus 100 n~l~ 103 (291)
T 1h6t_A 100 NKVK 103 (291)
T ss_dssp SCCC
T ss_pred CcCC
Confidence 5554
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.83 E-value=5.4e-21 Score=218.80 Aligned_cols=171 Identities=24% Similarity=0.287 Sum_probs=72.7
Q ss_pred cCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceE
Q 041438 130 SNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVF 209 (752)
Q Consensus 130 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 209 (752)
..|++|+.|+|++|.|+.. | .|..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|++. | .+..+++|+.
T Consensus 40 ~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-~-~l~~l~~L~~ 113 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL-S-SLKDLKKLKS 113 (605)
T ss_dssp HHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC-T-TSTTCTTCCE
T ss_pred hcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC-h-hhccCCCCCE
Confidence 3444455555555554432 2 24445555555555555544333 44555555555555555432 1 3445555555
Q ss_pred EeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCC
Q 041438 210 LYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSN 289 (752)
Q Consensus 210 L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 289 (752)
|+|++|+|++. ..+.++++|+.|+|++|++++. + .+..+++|+.|+|++|+|++..| +..+++|+.|+|++|
T Consensus 114 L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l-~---~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N 185 (605)
T 1m9s_A 114 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-T---VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKN 185 (605)
T ss_dssp EECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC-G---GGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred EEecCCCCCCC--ccccCCCccCEEECCCCccCCc-h---hhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCC
Confidence 55555554432 1233333333333333322221 0 12233344444444444443333 444444444444444
Q ss_pred cCcCCCCccccCCcccCEEEccCCcCc
Q 041438 290 YIVGEIPTQLGNIIYLNRISLSGNKLS 316 (752)
Q Consensus 290 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 316 (752)
.|++. ..+..+++|+.|+|++|.+.
T Consensus 186 ~i~~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 186 HISDL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp CCCBC--GGGTTCTTCSEEECCSEEEE
T ss_pred CCCCC--hHHccCCCCCEEEccCCcCc
Confidence 44432 12344444444444444443
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.83 E-value=9.6e-21 Score=216.75 Aligned_cols=194 Identities=25% Similarity=0.346 Sum_probs=121.6
Q ss_pred CCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEE
Q 041438 131 NLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFL 210 (752)
Q Consensus 131 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 210 (752)
.+.++..+.|+.+.+....+ +..|++|+.|+|++|.|... | .|..+++|+.|+|++|+|++..| +..+++|+.|
T Consensus 19 ~l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L 92 (605)
T 1m9s_A 19 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWL 92 (605)
T ss_dssp HHHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEE
T ss_pred HHHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEE
Confidence 34456777788888876554 56788888888888888753 3 57888888888888888887655 7888888888
Q ss_pred eeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCc
Q 041438 211 YLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNY 290 (752)
Q Consensus 211 ~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 290 (752)
+|++|+|++. | .+..+ ++|+.|+|++|+|++. ..+..+++|+.|+|++|.
T Consensus 93 ~Ls~N~l~~l-~-~l~~l--------------------------~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~ 142 (605)
T 1m9s_A 93 FLDENKIKDL-S-SLKDL--------------------------KKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNK 142 (605)
T ss_dssp ECCSSCCCCC-T-TSTTC--------------------------TTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSC
T ss_pred ECcCCCCCCC-h-hhccC--------------------------CCCCEEEecCCCCCCC--ccccCCCccCEEECCCCc
Confidence 8888888742 2 34444 4455555555555442 234555555555555555
Q ss_pred CcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhcccccccEEEcCCCcCccc
Q 041438 291 IVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQ 366 (752)
Q Consensus 291 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 366 (752)
|++. ..+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|+++ ..+..+++|+.|+|++|++++.
T Consensus 143 l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 143 ITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred cCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 5543 345555555555555555554444 55555555555555555553 2355555555555555555543
No 360
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=3.1e-20 Score=185.53 Aligned_cols=154 Identities=21% Similarity=0.251 Sum_probs=79.1
Q ss_pred cEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCC-ccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccc
Q 041438 258 SLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIP-TQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSA 336 (752)
Q Consensus 258 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 336 (752)
+.+++++|.++. +|..+. +.+++|+|++|.|++..| ..|.++++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 356666666653 333332 234555555555554433 2344555555555555555544444444444455554444
Q ss_pred cccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCc
Q 041438 337 NHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIP 416 (752)
Q Consensus 337 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 416 (752)
|+|++++ +..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|
T Consensus 91 N~l~~~~------------------------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 146 (220)
T 2v70_A 91 NRLENVQ------------------------HKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAP 146 (220)
T ss_dssp SCCCCCC------------------------GGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCT
T ss_pred CccCccC------------------------HhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECH
Confidence 4444444 4445555555555555555555555555555555555555555555555
Q ss_pred hhhhccCCCcEEEccCCcccCc
Q 041438 417 RCFEELHGLLHIDISYNKLEGH 438 (752)
Q Consensus 417 ~~~~~l~~L~~L~ls~N~l~~~ 438 (752)
..|..+++|+.|++++|++++.
T Consensus 147 ~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 147 GAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TTTTTCTTCCEEECCSCCEECS
T ss_pred HHhcCCCCCCEEEecCcCCcCC
Confidence 5555555555555555555543
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=1.3e-20 Score=196.77 Aligned_cols=171 Identities=25% Similarity=0.311 Sum_probs=120.3
Q ss_pred CCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCccccee
Q 041438 253 RCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYL 332 (752)
Q Consensus 253 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 332 (752)
.+++|+.|++++|.++.. + .+..+++|++|+|++|++++..+ +.++++|+.|++++|++++. ..+..+++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCCEE
Confidence 345666677777766644 2 35666777777777777765544 67777777777777777652 237777777777
Q ss_pred eccccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCC
Q 041438 333 DLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLS 412 (752)
Q Consensus 333 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 412 (752)
+|++|+++++ ..+..+++|+.|++++|++++. ..+..+++|++|+|++|++++..+ +..+++|+.|+|++|+++
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC
Confidence 7777777764 3567777777777777777654 467777777778888777776655 777778888888888877
Q ss_pred cCCchhhhccCCCcEEEccCCcccC
Q 041438 413 GLIPRCFEELHGLLHIDISYNKLEG 437 (752)
Q Consensus 413 ~~~p~~~~~l~~L~~L~ls~N~l~~ 437 (752)
+. | .+..+++|+.|++++|+++.
T Consensus 192 ~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 192 DL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp BC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CC-h-hhccCCCCCEEECcCCcccC
Confidence 65 3 37777888888888887765
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=4.5e-20 Score=184.35 Aligned_cols=151 Identities=23% Similarity=0.288 Sum_probs=75.8
Q ss_pred cEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeecccc
Q 041438 258 SLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSAN 337 (752)
Q Consensus 258 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 337 (752)
+.+++++|.++. +|..+. ++|+.|+|++|.|++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 356666666653 333322 45555555555555544445555555555555555555555555555555555555555
Q ss_pred ccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcC
Q 041438 338 HLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNL 411 (752)
Q Consensus 338 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 411 (752)
+|+.+++..|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 55554444445555555555555555444444444444444444444444444444444444444444444444
No 363
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=2.7e-20 Score=185.98 Aligned_cols=135 Identities=23% Similarity=0.268 Sum_probs=110.3
Q ss_pred CCCCEEECCCCcccccCC-ccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEE
Q 041438 109 PHLAYLDLYNNELFDIIP-PQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLI 187 (752)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 187 (752)
+.+++|+|++|+|+++.| ..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|.++++|++|+
T Consensus 32 ~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 111 (220)
T 2v70_A 32 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLM 111 (220)
T ss_dssp TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEE
T ss_pred CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEE
Confidence 456888899998888755 4578888888888888888888888888888888888888888888888888888888888
Q ss_pred ccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCC
Q 041438 188 LDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNG 243 (752)
Q Consensus 188 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 243 (752)
|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|++++|.+++
T Consensus 112 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 112 LRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp CTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 88888888888888888888888888888888778777776666655555555543
No 364
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.82 E-value=9.9e-23 Score=231.84 Aligned_cols=217 Identities=20% Similarity=0.136 Sum_probs=109.1
Q ss_pred cCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceE
Q 041438 130 SNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVF 209 (752)
Q Consensus 130 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 209 (752)
..+++|+.|+|++|+|+ .+|..++++++|+.|++++|......|. .+..+.+.+.+|..++++++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~-----------ll~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIIL-----------LMRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHH-----------HHHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHH-----------HHHhcccccCCHHHHHHHHhccc
Confidence 55667777777777776 5577777777777777765542111110 01112233455556666666666
Q ss_pred Ee-eccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCC
Q 041438 210 LY-LYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSS 288 (752)
Q Consensus 210 L~-L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 288 (752)
|+ ++.|.+. .|..+.+++|.++...+ ..|+.|+|++|+|++ +|. +..+++|+.|+|++
T Consensus 414 L~~l~~n~~~-----------~L~~l~l~~n~i~~l~~--------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~ 472 (567)
T 1dce_A 414 VDPMRAAYLD-----------DLRSKFLLENSVLKMEY--------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSH 472 (567)
T ss_dssp HCGGGHHHHH-----------HHHHHHHHHHHHHHHHH--------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCS
T ss_pred Ccchhhcccc-----------hhhhhhhhcccccccCc--------cCceEEEecCCCCCC-CcC-ccccccCcEeecCc
Confidence 65 5555432 33344444444443211 124445555555543 232 44444444444444
Q ss_pred CcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhcccccccEEEcCCCcCcccc-
Q 041438 289 NYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQI- 367 (752)
Q Consensus 289 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~- 367 (752)
|.| + .+|..|+.+++|++|+|++|+|+++ | .|+.+++|+.|+|++|+|++..
T Consensus 473 N~l------------------------~-~lp~~~~~l~~L~~L~Ls~N~l~~l-p-~l~~l~~L~~L~Ls~N~l~~~~~ 525 (567)
T 1dce_A 473 NRL------------------------R-ALPPALAALRCLEVLQASDNALENV-D-GVANLPRLQELLLCNNRLQQSAA 525 (567)
T ss_dssp SCC------------------------C-CCCGGGGGCTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSSCCCSSST
T ss_pred ccc------------------------c-ccchhhhcCCCCCEEECCCCCCCCC-c-ccCCCCCCcEEECCCCCCCCCCC
Confidence 444 4 3444444555555555555555542 2 4555555555555555555444
Q ss_pred chhccccccCCeeecCCccCCCCCCcc---cccccccceEEc
Q 041438 368 PIELDNLIHLSELDLSHNFLGEKISSR---ICRMESLEKLNL 406 (752)
Q Consensus 368 p~~~~~l~~L~~L~Ls~N~l~~~~~~~---~~~l~~L~~L~L 406 (752)
|..+..+++|+.|+|++|++++.+|.. +..+++|+.|++
T Consensus 526 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 526 IQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp TGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred cHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 555555555555555555555443321 233566666653
No 365
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.82 E-value=3.8e-20 Score=199.64 Aligned_cols=81 Identities=22% Similarity=0.303 Sum_probs=40.7
Q ss_pred CeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccC-CCCCCcEEEccCCCCCCcCCcCccCCCcceEEeecc
Q 041438 136 EYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVG-QLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYN 214 (752)
Q Consensus 136 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 214 (752)
+.+++++|+|+. +|..+. ..++.|+|++|+|++..+..|. ++++|++|+|++|+|+++.|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 355566665553 333332 2355555555555554444444 555555555555555544444555555555555555
Q ss_pred ccccc
Q 041438 215 NSFSG 219 (752)
Q Consensus 215 N~l~~ 219 (752)
|+|++
T Consensus 98 N~l~~ 102 (361)
T 2xot_A 98 NHLHT 102 (361)
T ss_dssp SCCCE
T ss_pred CcCCc
Confidence 55443
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.82 E-value=1.5e-22 Score=230.39 Aligned_cols=166 Identities=23% Similarity=0.145 Sum_probs=130.3
Q ss_pred ccccccccccCcccccccc-ccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCC
Q 041438 217 FSGSIPQQIGNLKSLFDMK-LCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEI 295 (752)
Q Consensus 217 l~~~~p~~~~~l~~L~~l~-l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 295 (752)
+.+.+|..++++++|+.|+ ++.|.+. +|..+.+++|.++...+
T Consensus 397 ~~~~~~~~l~~l~~L~~L~~l~~n~~~-------------~L~~l~l~~n~i~~l~~----------------------- 440 (567)
T 1dce_A 397 PLLYEKETLQYFSTLKAVDPMRAAYLD-------------DLRSKFLLENSVLKMEY----------------------- 440 (567)
T ss_dssp TGGGHHHHHHHHHHHHHHCGGGHHHHH-------------HHHHHHHHHHHHHHHHH-----------------------
T ss_pred cccCCHHHHHHHHhcccCcchhhcccc-------------hhhhhhhhcccccccCc-----------------------
Confidence 5566777777777777776 5555442 23344444454442211
Q ss_pred CccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhcccccccEEEcCCCcCccccchhccccc
Q 041438 296 PTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLI 375 (752)
Q Consensus 296 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 375 (752)
..|+.|+|++|+|++ +|. |+.+++|+.|+|++|.|+. +|..|+.+++|+.|+|++|+|++ +| .++.++
T Consensus 441 -------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~-lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~ 508 (567)
T 1dce_A 441 -------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRA-LPPALAALRCLEVLQASDNALEN-VD-GVANLP 508 (567)
T ss_dssp -------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCC-CCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCS
T ss_pred -------cCceEEEecCCCCCC-CcC-ccccccCcEeecCcccccc-cchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCC
Confidence 136667777777775 455 8889999999999999995 57799999999999999999997 56 899999
Q ss_pred cCCeeecCCccCCCCC-CcccccccccceEEccCCcCCcCCch---hhhccCCCcEEEc
Q 041438 376 HLSELDLSHNFLGEKI-SSRICRMESLEKLNLSYNNLSGLIPR---CFEELHGLLHIDI 430 (752)
Q Consensus 376 ~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~p~---~~~~l~~L~~L~l 430 (752)
+|+.|+|++|+|++.+ |..+..+++|+.|+|++|++++.+|. .+..+++|+.||+
T Consensus 509 ~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 509 RLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 9999999999999987 99999999999999999999998764 3456899999975
No 367
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.82 E-value=1.5e-20 Score=195.04 Aligned_cols=145 Identities=15% Similarity=0.122 Sum_probs=113.9
Q ss_pred hHHHHHHhhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCC---------------------------------
Q 041438 492 VYEEIIRATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLP--------------------------------- 538 (752)
Q Consensus 492 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------------------------- 538 (752)
....+......|++.+.||+|+||.||+|+..+|+.||||.++....
T Consensus 81 ~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~ 160 (282)
T 1zar_A 81 SLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK 160 (282)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence 44556667777888999999999999999997899999999863211
Q ss_pred ------CCccccCCceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEe
Q 041438 539 ------DNFCSHPRQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLL 612 (752)
Q Consensus 539 ------~~~~~~~~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll 612 (752)
..++ ..+..|+||||+++|+|.+ +.. .....++.|++.||+|||+. ||+||||||+|||+
T Consensus 161 l~~~~v~~~~-~~~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl 226 (282)
T 1zar_A 161 LQGLAVPKVY-AWEGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLV 226 (282)
T ss_dssp TTTSSSCCEE-EEETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEE
T ss_pred ccCCCcCeEE-eccceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEE
Confidence 0111 2345699999999999988 421 23457999999999999999 99999999999999
Q ss_pred CCCCceEEeecccceeccCCCCCcccccCCCCccCcccccc----------CCCCCccchhh
Q 041438 613 DLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELAYT----------MKVTEKCDVYS 664 (752)
Q Consensus 613 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~ksDIwS 664 (752)
+ ++.+||+|||+|+.. ..|+|||++.+ .+++.++|+|.
T Consensus 227 ~-~~~vkl~DFG~a~~~-------------~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVEV-------------GEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp E-TTEEEECCCTTCEET-------------TSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred E-CCcEEEEECCCCeEC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 9 999999999999743 35788998753 34556667765
No 368
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=2.2e-19 Score=180.53 Aligned_cols=154 Identities=28% Similarity=0.320 Sum_probs=98.2
Q ss_pred CcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccc
Q 041438 257 LSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSA 336 (752)
Q Consensus 257 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 336 (752)
.+.++.+++.++. +|..+. ++|++|+|++|.|++..|..|.++++|+.|+|++|+|+...+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 4567777777763 343332 6677777777777766666677777777777777777665556666666666666666
Q ss_pred cccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcC
Q 041438 337 NHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGL 414 (752)
Q Consensus 337 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 414 (752)
|+|+++++..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+++.
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 6666666666666666666666666665 4555556666666666666666555555555555666666666655544
No 369
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.80 E-value=1e-20 Score=201.36 Aligned_cols=289 Identities=13% Similarity=0.050 Sum_probs=142.5
Q ss_pred CCCCCEEECCCCcccccCCccCcC-CCCCCeeecCCCccc--ccCCcccccccccceeeccCcccCCCCCcccCC-----
Q 041438 108 FPHLAYLDLYNNELFDIIPPQISN-LSKLEYLDFLTNKLS--GHIPSEISLLTHLTILHISRNQLNGSIPHEVGQ----- 179 (752)
Q Consensus 108 l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~----- 179 (752)
+++++.|.++++ +....-..+.. +++|++|||++|+|. ...+..+. .++.+.+..|.| .+.+|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~---~~~~~~~~~~~I---~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYP---NGKFYIYMANFV---PAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSG---GGCCEEECTTEE---CTTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCcccccc---cccccccccccc---CHHHhccccccc
Confidence 445666666543 21111112222 566777777777766 33222222 244455555532 2345555
Q ss_pred ---CCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCcccccccccccccc--CCCcCCCCCCCCC
Q 041438 180 ---LNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQL--NGAIPLSIDWGRC 254 (752)
Q Consensus 180 ---l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l--~~~~~~~~~~~~l 254 (752)
+++|+.|+|.+ .++.+.+.+|.++++|+.|+|++|.+..+.+.+|.++.++..+.+..+.. ....-....|..+
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~ 175 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG 175 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccc
Confidence 67777777766 66666666677777777777777766656666666555554443333211 0000001112223
Q ss_pred CCCc-EEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceee
Q 041438 255 PQLS-LLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLD 333 (752)
Q Consensus 255 ~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 333 (752)
..|+ .+++.... .++..+ ...-....+++.+.+.++-...........+++|+.|+
T Consensus 176 ~~L~~~i~~~~~~---~l~~~~--------------------~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~ 232 (329)
T 3sb4_A 176 EPLETTIQVGAMG---KLEDEI--------------------MKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLD 232 (329)
T ss_dssp CCCEEEEEECTTC---CHHHHH--------------------HHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEE
T ss_pred cccceeEEecCCC---cHHHHH--------------------hhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEE
Confidence 3333 22222110 011000 00001122333343333211100000001245566666
Q ss_pred ccccccccccchhhcccccccEEEcCCCcCccccchhccccccCC-eeecCCccCCCCCCcccccccccceEEccCCcCC
Q 041438 334 LSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLS-ELDLSHNFLGEKISSRICRMESLEKLNLSYNNLS 412 (752)
Q Consensus 334 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 412 (752)
|++|+++.+...+|.++++|+.|+|++| ++.+.+..|.++++|+ .+++.+ .++.+.+..|.++++|+.+++++|+++
T Consensus 233 L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~ 310 (329)
T 3sb4_A 233 ISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKIT 310 (329)
T ss_dssp CTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCC
T ss_pred CCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccC
Confidence 6666666655556666666666666655 5555555666666666 666665 555555666666666666666666666
Q ss_pred cCCchhhhccCCCcEEE
Q 041438 413 GLIPRCFEELHGLLHID 429 (752)
Q Consensus 413 ~~~p~~~~~l~~L~~L~ 429 (752)
.+.+.+|.++++|+.++
T Consensus 311 ~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 311 TLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECTTTTCTTCCCCEEE
T ss_pred ccchhhhcCCcchhhhc
Confidence 66666666666666665
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.80 E-value=4.7e-20 Score=189.51 Aligned_cols=172 Identities=18% Similarity=0.218 Sum_probs=110.9
Q ss_pred CCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEE
Q 041438 131 NLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFL 210 (752)
Q Consensus 131 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 210 (752)
++.+++.++|++|.+++.. .+..+++|++|++++|.|+. +| .+..+++|++|+|++|+|++..| +.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4555666666666666443 45666666677776666663 33 56666666666666666665444 6666666666
Q ss_pred eeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCc
Q 041438 211 YLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNY 290 (752)
Q Consensus 211 ~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 290 (752)
+|++|++++. |. +.. ++|+.|++++|++++. ..+..+++|++|+|++|+
T Consensus 91 ~L~~N~l~~l-~~---------------------------~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~ 139 (263)
T 1xeu_A 91 SVNRNRLKNL-NG---------------------------IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNK 139 (263)
T ss_dssp ECCSSCCSCC-TT---------------------------CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSC
T ss_pred ECCCCccCCc-Cc---------------------------ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCc
Confidence 6666666532 11 011 5667777777777753 246777777777777777
Q ss_pred CcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeecccccccccc
Q 041438 291 IVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFV 343 (752)
Q Consensus 291 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 343 (752)
|++. + .+..+++|+.|++++|++++. ..+..+++|+.|++++|.++..+
T Consensus 140 i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 140 LKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp CCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred CCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCc
Confidence 7754 2 567777777777777777765 55677777777777777776654
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.79 E-value=3.8e-20 Score=190.19 Aligned_cols=168 Identities=22% Similarity=0.302 Sum_probs=98.5
Q ss_pred CCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEE
Q 041438 108 FPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLI 187 (752)
Q Consensus 108 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 187 (752)
+.++..+++++|.++++. .+..+++|++|+|++|+|+.. | .+..+++|++|+|++|+|++..+ +.++++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 445666777777777643 567777888888888877743 3 57777888888888888876544 77788888888
Q ss_pred ccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEcccccc
Q 041438 188 LDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNI 267 (752)
Q Consensus 188 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l 267 (752)
|++|++++..+ +.. ++|++|+|++|++++. + .+.++++|+.|++++|++++.. .+..+++|+.|++++|++
T Consensus 92 L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~~----~l~~l~~L~~L~L~~N~i 162 (263)
T 1xeu_A 92 VNRNRLKNLNG--IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSIV----MLGFLSKLEVLDLHGNEI 162 (263)
T ss_dssp CCSSCCSCCTT--CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBCG----GGGGCTTCCEEECTTSCC
T ss_pred CCCCccCCcCc--ccc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCCh----HHccCCCCCEEECCCCcC
Confidence 88888876432 222 7788888888877753 2 3444444444444333333321 122333444444444444
Q ss_pred CCCCCcccCCCCCCCEEecCCCcCc
Q 041438 268 TGNIPFEIGESPQLQYLDLSSNYIV 292 (752)
Q Consensus 268 ~~~~p~~~~~l~~L~~L~Ls~N~l~ 292 (752)
++. ..+..+++|++|++++|.++
T Consensus 163 ~~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 163 TNT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp CBC--TTSTTCCCCCEEEEEEEEEE
T ss_pred cch--HHhccCCCCCEEeCCCCccc
Confidence 433 23334444444444444443
No 372
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=6e-20 Score=215.40 Aligned_cols=177 Identities=22% Similarity=0.266 Sum_probs=78.5
Q ss_pred CCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccc---------cCCcccccccccceeeccCcccCCCCCcccCC
Q 041438 109 PHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSG---------HIPSEISLLTHLTILHISRNQLNGSIPHEVGQ 179 (752)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~---------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 179 (752)
+.++.|+|.+|.+... +.. .|+.++|++|.|.+ ..|..|..+++|+.|+|++|.|. .+|..+.+
T Consensus 173 ~~~~~l~L~~n~~~~~-~~~-----~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~ 245 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQA-----LLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFK 245 (727)
T ss_dssp -------------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGG
T ss_pred CccceEEeeCCCCCcc-hhh-----HhhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcC
Confidence 5688899999988774 332 24444555554443 33555556666666666666665 44544555
Q ss_pred CCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcE
Q 041438 180 LNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSL 259 (752)
Q Consensus 180 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~ 259 (752)
+++|++|+|++|+|+ .+|..|.++++|++|+|++|+|+ .+|..|++| ++|++
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l--------------------------~~L~~ 297 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSC--------------------------FQLKY 297 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGG--------------------------TTCSE
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCC--------------------------CCCCE
Confidence 666666666666665 45555566666666666666655 445444443 34445
Q ss_pred EEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcc-cCEEEccCCcCcccCCc
Q 041438 260 LDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIY-LNRISLSGNKLSGRIPG 321 (752)
Q Consensus 260 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~ 321 (752)
|+|++|.|+ .+|..|+.+++|++|+|++|.|++.+|..+..+.. +..++|++|.+++.+|.
T Consensus 298 L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 298 FYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp EECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred EECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 666666554 44555666666666666666666666665544321 12355666666665554
No 373
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=8.6e-19 Score=186.49 Aligned_cols=261 Identities=15% Similarity=0.075 Sum_probs=162.1
Q ss_pred CCCCCEEECCCCccc--ccCCccCcCCCCCCeeecCCCcccccCCccccc--------ccccceeeccCcccCCCCCccc
Q 041438 108 FPHLAYLDLYNNELF--DIIPPQISNLSKLEYLDFLTNKLSGHIPSEISL--------LTHLTILHISRNQLNGSIPHEV 177 (752)
Q Consensus 108 l~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~ 177 (752)
+++|++|||++|+|. ...+..+. .++.+.+..|.| .+.+|.+ +++|+.|+|.+ .++.+.+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~---~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYP---NGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSG---GGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCcccccc---cccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 788999999999998 44443343 356666666643 4567777 99999999999 8887888899
Q ss_pred CCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccc----cccccccccCccccc-cccccccccCCCcCCCCC--
Q 041438 178 GQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSF----SGSIPQQIGNLKSLF-DMKLCINQLNGAIPLSID-- 250 (752)
Q Consensus 178 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l----~~~~p~~~~~l~~L~-~l~l~~N~l~~~~~~~~~-- 250 (752)
.++++|+.|+|++|.+..+.+.+|.++.++..+.+..+.. .......|.++..|+ .+.+.... .++....
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~---~l~~~~~~~ 197 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMG---KLEDEIMKA 197 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTC---CHHHHHHHT
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCC---cHHHHHhhc
Confidence 9999999999999999988899999988888887766432 223334455555554 22221110 0000000
Q ss_pred CCCCCCCcEEEccccccCCCCCccc-CCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCccc
Q 041438 251 WGRCPQLSLLDVSINNITGNIPFEI-GESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINL 329 (752)
Q Consensus 251 ~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 329 (752)
.-...++..+.+.++-.. .....+ ..+++|+.|+|++|.++...+..|.++.+|+.++|.+| ++.+.+.+|.++++|
T Consensus 198 ~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L 275 (329)
T 3sb4_A 198 GLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRL 275 (329)
T ss_dssp TCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred ccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhc
Confidence 001234455555443211 111111 12566666666666666555566666666666666665 555556666666666
Q ss_pred c-eeeccccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeee
Q 041438 330 E-YLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELD 381 (752)
Q Consensus 330 ~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 381 (752)
+ .+++.+ .++.+.+.+|.++++|+.|++++|+++.+.+..|.++++|+.|+
T Consensus 276 ~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 276 AGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred cEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 6 666665 56666666666666666666666666655555666666655554
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=2.4e-18 Score=168.75 Aligned_cols=151 Identities=19% Similarity=0.281 Sum_probs=75.5
Q ss_pred CCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCccccee
Q 041438 253 RCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYL 332 (752)
Q Consensus 253 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 332 (752)
.+++|+.|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|++++..+..++.+++|++|
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 3445556666666665 233 45555666666666664432 2345555555555555555555455555555555555
Q ss_pred eccccccccccchhhcccccccEEEcCCCc-CccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcC
Q 041438 333 DLSANHLSNFVLESLGSLVKLYYLNLSHNK-LSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNL 411 (752)
Q Consensus 333 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 411 (752)
+|++|.+++..+..+..+++|++|++++|+ ++ .+| .+..+++|++|++++|.+++.. .+..+++|+.|++++|++
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC--
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCccc
Confidence 555555555445555555555555555554 32 222 3444444444444444443321 333344444444444443
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=2.3e-18 Score=168.81 Aligned_cols=154 Identities=18% Similarity=0.315 Sum_probs=136.5
Q ss_pred CCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhcccccccE
Q 041438 276 GESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYY 355 (752)
Q Consensus 276 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 355 (752)
..+++|++|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|.+++..+..|+.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 56789999999999998 555 68999999999999998763 457999999999999999999988899999999999
Q ss_pred EEcCCCcCccccchhccccccCCeeecCCcc-CCCCCCcccccccccceEEccCCcCCcCCchhhhccCCCcEEEccCCc
Q 041438 356 LNLSHNKLSQQIPIELDNLIHLSELDLSHNF-LGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNK 434 (752)
Q Consensus 356 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 434 (752)
|+|++|++++..|..+..+++|++|+|++|. ++. ++ .+..+++|+.|++++|++++.. .+..+++|++|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCcc
Confidence 9999999998889999999999999999998 655 44 6899999999999999999864 78999999999999999
Q ss_pred ccC
Q 041438 435 LEG 437 (752)
Q Consensus 435 l~~ 437 (752)
+.+
T Consensus 193 i~~ 195 (197)
T 4ezg_A 193 IGG 195 (197)
T ss_dssp ---
T ss_pred cCC
Confidence 864
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=7.8e-18 Score=164.27 Aligned_cols=112 Identities=26% Similarity=0.307 Sum_probs=85.2
Q ss_pred CCCEEECCCCcccccCCc-cCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEc
Q 041438 110 HLAYLDLYNNELFDIIPP-QISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLIL 188 (752)
Q Consensus 110 ~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 188 (752)
+|++|+|++|+|+++.+. .|+++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 677788888877776664 4777777777777777777777777777777777777777777777777777777777777
Q ss_pred cCCCCCCcCCcCccCCCcceEEeeccccccccc
Q 041438 189 DSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSI 221 (752)
Q Consensus 189 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 221 (752)
++|+|++..|..|..+++|++|+|++|.+++..
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 777777777777777777777777777776543
No 377
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.73 E-value=1.4e-17 Score=160.20 Aligned_cols=137 Identities=25% Similarity=0.320 Sum_probs=117.8
Q ss_pred CCCcccceeeCCCCCEEEEEcCCCCCcccccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCC
Q 041438 71 SLCTWSGIHCNHAGRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIP 150 (752)
Q Consensus 71 ~~c~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 150 (752)
..|.|.++.|...+ + . .++ ..-.++|++|+|++|+++++.+..|+++++|++|+|++|+|++..+
T Consensus 5 C~C~~~~l~~~~~~-l----------~-~~p---~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (177)
T 2o6r_A 5 CSCSGTEIRCNSKG-L----------T-SVP---TGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPD 69 (177)
T ss_dssp CEEETTEEECCSSC-C----------S-SCC---TTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred CEeCCCEEEecCCC-C----------c-cCC---CCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeCh
Confidence 34889999997432 1 1 111 2234789999999999999888889999999999999999998888
Q ss_pred cccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeecccccccccc
Q 041438 151 SEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIP 222 (752)
Q Consensus 151 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 222 (752)
..|.++++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|.+.+..|
T Consensus 70 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 70 GVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 889999999999999999998888889999999999999999998888788999999999999999987554
No 378
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=3.1e-18 Score=167.08 Aligned_cols=132 Identities=22% Similarity=0.250 Sum_probs=100.0
Q ss_pred CEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCc-ccCCCcccceeeccccccccccchhhcccccccEEEcCC
Q 041438 282 QYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPG-ELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSH 360 (752)
Q Consensus 282 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 360 (752)
+++++++|.++ .+|..+.. +|+.|++++|++++..+. .|+.+++|++|+|++|+|+++.|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67888888885 45555443 778888888888776664 477788888888888888887777777888888888888
Q ss_pred CcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCc
Q 041438 361 NKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIP 416 (752)
Q Consensus 361 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 416 (752)
|+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 88877777777777777777777777777777777777777777777777776544
No 379
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.72 E-value=8.6e-17 Score=175.00 Aligned_cols=270 Identities=10% Similarity=0.029 Sum_probs=132.1
Q ss_pred CCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEE
Q 041438 108 FPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLI 187 (752)
Q Consensus 108 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 187 (752)
...++.+.+.+ .++.+.+.+|.+. +|+.+.|..| ++.+...+|.+ .+|+.+.|.. .++.+.+.+|.++++|+.++
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 35556666543 3555566666663 5666666555 55555566665 3566666654 45545555566666666666
Q ss_pred ccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEcccccc
Q 041438 188 LDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNI 267 (752)
Q Consensus 188 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l 267 (752)
|++|+++.+...+|. .++|+.+.|.+| ++.+...+|.++. +|+.+++..| +
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~--------------------------~L~~l~l~~~-l 237 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTS--------------------------QLKTIEIPEN-V 237 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCT--------------------------TCCCEECCTT-C
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCC--------------------------CCCEEecCCC-c
Confidence 666666655445554 355655555432 4433333333333 3333333322 2
Q ss_pred CCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhh
Q 041438 268 TGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESL 347 (752)
Q Consensus 268 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 347 (752)
+.+...+|.+ .+|+.+.+. |.++...+.+|.++++|+.+++.+|.+.. +.+..+...+|
T Consensus 238 ~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~-------------------~~~~~I~~~aF 296 (401)
T 4fdw_A 238 STIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFND-------------------DPEAMIHPYCL 296 (401)
T ss_dssp CEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCC-------------------CTTCEECTTTT
T ss_pred cCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccC-------------------CcccEECHHHh
Confidence 2223333333 344444442 22333333444444444444444443320 00013334444
Q ss_pred cccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCchhhhccC-CCc
Q 041438 348 GSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELH-GLL 426 (752)
Q Consensus 348 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~ 426 (752)
.++++|+.++|. |.++.+....|.++++|+.++|..| ++.+...+|.++ +|+.+++++|.+..+.+..|.+++ .++
T Consensus 297 ~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~ 373 (401)
T 4fdw_A 297 EGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDIT 373 (401)
T ss_dssp TTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCC
T ss_pred hCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCcc
Confidence 445555555554 2344444445555555555555333 444444555555 555555555555555555555553 455
Q ss_pred EEEccCCcc
Q 041438 427 HIDISYNKL 435 (752)
Q Consensus 427 ~L~ls~N~l 435 (752)
.|++..|.+
T Consensus 374 ~l~vp~~~~ 382 (401)
T 4fdw_A 374 VIRVPAESV 382 (401)
T ss_dssp EEEECGGGH
T ss_pred EEEeCHHHH
Confidence 666655543
No 380
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.72 E-value=1.3e-16 Score=173.58 Aligned_cols=242 Identities=10% Similarity=0.069 Sum_probs=151.8
Q ss_pred cccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccc
Q 041438 157 THLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKL 236 (752)
Q Consensus 157 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l 236 (752)
..++.+.+.+ .++.+...+|.+. +|+.+.|.+| ++.+...+|.+. +|+.+.|.+ .++.+.+.+|.+
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~--------- 178 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYY--------- 178 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTT---------
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhC---------
Confidence 4445555432 3443444555553 4666665554 554555555553 466665543 333333333333
Q ss_pred cccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCc
Q 041438 237 CINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLS 316 (752)
Q Consensus 237 ~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 316 (752)
|++|+.++++.|+++.....+|. ..+|+.+.|..+ ++.....+|.++.+|+.+++.+| ++
T Consensus 179 -----------------c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~ 238 (401)
T 4fdw_A 179 -----------------CYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VS 238 (401)
T ss_dssp -----------------CTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CC
T ss_pred -----------------cccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-cc
Confidence 33333444444444433333333 345555555432 44344455555555555555543 44
Q ss_pred ccCCcccCCCcccceeeccccccccccchhhcccccccEEEcCCCcCc-----cccchhccccccCCeeecCCccCCCCC
Q 041438 317 GRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLS-----QQIPIELDNLIHLSELDLSHNFLGEKI 391 (752)
Q Consensus 317 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 391 (752)
.+...+|.+ .+|+.++| .|.++.+...+|.++++|+.+++.+|.+. .+.+..|.++++|+.++|. |.++.+.
T Consensus 239 ~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~ 315 (401)
T 4fdw_A 239 TIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILG 315 (401)
T ss_dssp EECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEEC
T ss_pred Ccccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEh
Confidence 455555666 56777777 45566666777777777777777776664 5677899999999999999 5588888
Q ss_pred CcccccccccceEEccCCcCCcCCchhhhccCCCcEEEccCCcccC
Q 041438 392 SSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYNKLEG 437 (752)
Q Consensus 392 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 437 (752)
...|.++.+|+.+.|..| ++.+.+.+|.++ +|+.+++++|.+..
T Consensus 316 ~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 316 QGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQ 359 (401)
T ss_dssp TTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCB
T ss_pred hhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcc
Confidence 899999999999999655 888888999999 99999999998754
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.71 E-value=1.6e-17 Score=158.37 Aligned_cols=133 Identities=22% Similarity=0.172 Sum_probs=99.3
Q ss_pred CCCCCCEEECCCCccc-ccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcE
Q 041438 107 SFPHLAYLDLYNNELF-DIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNH 185 (752)
Q Consensus 107 ~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 185 (752)
..++|++|+|++|+++ +.+|..|..+++|++|+|++|.|++. ..|..+++|++|+|++|++++.+|..+..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3467888888888887 56777788888888888888888866 66788888888888888888777777777888888
Q ss_pred EEccCCCCCCcC-CcCccCCCcceEEeecccccccccc---ccccCcccccccccccccc
Q 041438 186 LILDSNFLGGSI-PRSLSNFTNLVFLYLYNNSFSGSIP---QQIGNLKSLFDMKLCINQL 241 (752)
Q Consensus 186 L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~l~l~~N~l 241 (752)
|+|++|++++.. +..+..+++|++|+|++|.+++..+ ..+..+++|+.|+++.|.+
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 888888888643 2677888888888888888876544 3555555555544444444
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.69 E-value=1.2e-17 Score=155.71 Aligned_cols=130 Identities=20% Similarity=0.199 Sum_probs=110.1
Q ss_pred CCCCCCCEEECCCCccc-ccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCc
Q 041438 106 SSFPHLAYLDLYNNELF-DIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLN 184 (752)
Q Consensus 106 ~~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 184 (752)
...++|++|++++|+++ +.+|..+..+++|++|+|++|++++. ..|..+++|++|+|++|.|++.+|..+..+++|+
T Consensus 14 ~~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 91 (149)
T 2je0_A 14 RTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLT 91 (149)
T ss_dssp CCGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCC
T ss_pred CCCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCC
Confidence 34578999999999998 67888899999999999999999876 7789999999999999999987888888899999
Q ss_pred EEEccCCCCCCc-CCcCccCCCcceEEeecccccccccc---ccccCcccccccccc
Q 041438 185 HLILDSNFLGGS-IPRSLSNFTNLVFLYLYNNSFSGSIP---QQIGNLKSLFDMKLC 237 (752)
Q Consensus 185 ~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~l~l~ 237 (752)
+|+|++|++++. .+..+.++++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 92 ~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 92 HLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp EEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred EEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 999999999874 34788999999999999999987665 467767666666554
No 383
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=7.1e-17 Score=153.76 Aligned_cols=131 Identities=25% Similarity=0.151 Sum_probs=68.3
Q ss_pred CCCCEEecCCCcCc-CCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhcccccccEEE
Q 041438 279 PQLQYLDLSSNYIV-GEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLN 357 (752)
Q Consensus 279 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 357 (752)
++|++|++++|.++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45566666666655 45555555566666666666666544 4555556666666666666555555555555555555
Q ss_pred cCCCcCccccc-hhccccccCCeeecCCccCCCCCC---cccccccccceEEccCCcC
Q 041438 358 LSHNKLSQQIP-IELDNLIHLSELDLSHNFLGEKIS---SRICRMESLEKLNLSYNNL 411 (752)
Q Consensus 358 Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~L~~N~l 411 (752)
|++|++++... ..+..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 55555554321 344444444444444444443333 2334444444444444443
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.69 E-value=1.1e-16 Score=156.14 Aligned_cols=109 Identities=24% Similarity=0.275 Sum_probs=78.4
Q ss_pred CCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEc
Q 041438 109 PHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLIL 188 (752)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 188 (752)
++|++|+|++|+|+. +|..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 31 ~~l~~L~L~~n~i~~-ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCCS-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCch-hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 467777777777764 4567777777777777777777776677777777777777777777766667777777777777
Q ss_pred cCCCCCCcCCcCccCCCcceEEeecccccc
Q 041438 189 DSNFLGGSIPRSLSNFTNLVFLYLYNNSFS 218 (752)
Q Consensus 189 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 218 (752)
++|+|+...+..|.++++|+.|+|++|.+.
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 777777666666777777777777777665
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.68 E-value=1.6e-16 Score=152.75 Aligned_cols=130 Identities=25% Similarity=0.195 Sum_probs=105.8
Q ss_pred CCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccC
Q 041438 111 LAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDS 190 (752)
Q Consensus 111 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 190 (752)
.+.+++++|+++.+ |..+ .++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 9 ~~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 35688899998875 4333 36899999999999988888889999999999999999987777889999999999999
Q ss_pred CCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCC
Q 041438 191 NFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNG 243 (752)
Q Consensus 191 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 243 (752)
|+|++..+..|.++++|++|+|++|+|++..+..|.++++|+.|++++|.+.+
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 99998888888999999999999999987666666666666655555555544
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=9.5e-17 Score=149.58 Aligned_cols=127 Identities=23% Similarity=0.240 Sum_probs=68.1
Q ss_pred CCCCEEecCCCcCc-CCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhcccccccEEE
Q 041438 279 PQLQYLDLSSNYIV-GEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLN 357 (752)
Q Consensus 279 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 357 (752)
++|+.|++++|.++ +.+|..+..+++|+.|++++|.+++. ..++.++ +|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~------------------------~L~~L~ 70 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLN------------------------KLKKLE 70 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCT------------------------TCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCC------------------------CCCEEE
Confidence 45555555555555 44555555555555555555555443 3444444 445555
Q ss_pred cCCCcCccccchhccccccCCeeecCCccCCCC-CCcccccccccceEEccCCcCCcCCc---hhhhccCCCcEEEcc
Q 041438 358 LSHNKLSQQIPIELDNLIHLSELDLSHNFLGEK-ISSRICRMESLEKLNLSYNNLSGLIP---RCFEELHGLLHIDIS 431 (752)
Q Consensus 358 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~ls 431 (752)
|++|++++.+|..+..+++|++|++++|.+++. .+..+..+++|++|++++|++++..+ ..+..+++|+.||++
T Consensus 71 Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 71 LSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 555555444444444455555555555555442 22445556666666666666666554 456666666666664
No 387
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.66 E-value=2.5e-16 Score=161.16 Aligned_cols=126 Identities=17% Similarity=0.152 Sum_probs=95.0
Q ss_pred HHHHHhhcccccceeeccCCceEEEEEEe-CCCcE--EEEEccCCCCCC-------------------------------
Q 041438 494 EEIIRATNDFDAKHCIGKGGHGSVYIARV-PSGEI--FAVKKFHSPLPD------------------------------- 539 (752)
Q Consensus 494 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------------- 539 (752)
..+.....-|++.+.||+|+||.||+|+. .+|+. ||||+++.....
T Consensus 40 ~~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (258)
T 1zth_A 40 YKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEK 119 (258)
T ss_dssp HHHHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHH
T ss_pred HHHHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHH
Confidence 44444444578899999999999999996 78999 999986432100
Q ss_pred -----------Cc----cccCCceEEEEEeccC-C----ChHHHhccCccccccCHHHHHHHHHHHHHHHHHHH-hCCCC
Q 041438 540 -----------NF----CSHPRQSFIVYEYLES-G----SLDKILNNDASAKELGWTQRLNVIKGVADALFYLH-NNCFP 598 (752)
Q Consensus 540 -----------~~----~~~~~~~~lV~E~~~~-g----~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH-~~~~~ 598 (752)
+. .......++||||+.+ | +|.++... .++..+..++.|++.||.||| +.
T Consensus 120 E~~~l~~l~~~~i~~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~--- 190 (258)
T 1zth_A 120 EFRNLERAKEAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA--- 190 (258)
T ss_dssp HHHHHHHHHHTTCCCCCEEEEETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---
T ss_pred HHHHHHHHHhCCCCCCeEEEcCCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---
Confidence 00 0001345799999953 3 66665432 234567899999999999999 88
Q ss_pred CeeecCCCCCCEEeCCCCceEEeecccceecc
Q 041438 599 PIVHWDISSKNVLLDLGYEAHVSDFRIAKFLN 630 (752)
Q Consensus 599 ~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~ 630 (752)
||+||||||+|||+++ .++|+|||+|....
T Consensus 191 givHrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 191 ELVHADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp CEECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred CEEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 9999999999999998 99999999998653
No 388
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.66 E-value=3.5e-15 Score=162.73 Aligned_cols=315 Identities=13% Similarity=0.043 Sum_probs=229.9
Q ss_pred ccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCC
Q 041438 100 LLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQ 179 (752)
Q Consensus 100 l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 179 (752)
+.+.+|.++.+|+.+.|.. .++.+...+|.++++|+.++|..| ++.+...+|.++++|+.+.+..+ +......+|.+
T Consensus 62 Ig~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~ 138 (394)
T 4fs7_A 62 IGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKG 138 (394)
T ss_dssp ECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTT
T ss_pred hHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeec
Confidence 4466899999999999974 488888999999999999999765 77777889999999999888755 45456667777
Q ss_pred CCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcE
Q 041438 180 LNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSL 259 (752)
Q Consensus 180 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~ 259 (752)
...++....... ..+...+|.++++|+.+.+.++. ..+....|.++.+|+.+.+..| ++.. + ...|..+..|+.
T Consensus 139 ~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I-~-~~~F~~~~~L~~ 212 (394)
T 4fs7_A 139 CDFKEITIPEGV--TVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKII-R-DYCFAECILLEN 212 (394)
T ss_dssp CCCSEEECCTTC--CEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEE-C-TTTTTTCTTCCB
T ss_pred ccccccccCccc--cccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEe-C-chhhccccccce
Confidence 765444443333 33445678888889988887654 4466677888888888888765 3221 1 224677888888
Q ss_pred EEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeecccccc
Q 041438 260 LDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHL 339 (752)
Q Consensus 260 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 339 (752)
+.+..+... +........+|+.+.+..+ ++......|.++..|+.+.+..+... +....|..+..++.+....+.+
T Consensus 213 i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i 288 (394)
T 4fs7_A 213 MEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV 288 (394)
T ss_dssp CCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE
T ss_pred eecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee
Confidence 877765432 2333445567888877654 33345567778888888888777554 5667788888888887776653
Q ss_pred ccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCchhh
Q 041438 340 SNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCF 419 (752)
Q Consensus 340 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 419 (752)
....|..+.+|+.+.+..+ ++.+...+|.++++|+.++|.++ ++.+...+|.++.+|+.+++..| ++.+...+|
T Consensus 289 ---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF 362 (394)
T 4fs7_A 289 ---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAF 362 (394)
T ss_dssp ---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTB
T ss_pred ---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHh
Confidence 3456778888888888755 66666778888888888888654 66667778888888888888776 777777788
Q ss_pred hccCCCcEEEccCC
Q 041438 420 EELHGLLHIDISYN 433 (752)
Q Consensus 420 ~~l~~L~~L~ls~N 433 (752)
.++.+|+.+++..+
T Consensus 363 ~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 363 QGCINLKKVELPKR 376 (394)
T ss_dssp TTCTTCCEEEEEGG
T ss_pred hCCCCCCEEEECCC
Confidence 88888888888654
No 389
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=4.5e-16 Score=151.76 Aligned_cols=109 Identities=27% Similarity=0.288 Sum_probs=59.8
Q ss_pred ccceeeccccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEcc
Q 041438 328 NLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLS 407 (752)
Q Consensus 328 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 407 (752)
+|++|+|++|+|+.+ |..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 32 ~l~~L~L~~n~i~~i-p~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFTLV-PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCCSC-CGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCchh-HHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 444444555544432 2445555555555555555555545555555555555555555555555555555566666666
Q ss_pred CCcCCcCCchhhhccCCCcEEEccCCcccC
Q 041438 408 YNNLSGLIPRCFEELHGLLHIDISYNKLEG 437 (752)
Q Consensus 408 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 437 (752)
+|+|+++.+..|..+++|+.|++++|++.+
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 666665555556666666666666666543
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.61 E-value=4.6e-16 Score=149.35 Aligned_cols=131 Identities=18% Similarity=0.208 Sum_probs=94.7
Q ss_pred ccCCCCCCCEEECCCCcccccCCccCcCCC-CCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCC
Q 041438 104 SFSSFPHLAYLDLYNNELFDIIPPQISNLS-KLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNF 182 (752)
Q Consensus 104 ~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 182 (752)
.|...++|++|+|++|+|+.+ |. +..+. +|++|+|++|+|++. ..|..+++|++|+|++|+|++..+..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 466778888888888888865 43 44444 888888888888876 56888888888888888888665555688888
Q ss_pred CcEEEccCCCCCCcCCc--CccCCCcceEEeecccccccccccc----ccCccccccccccccc
Q 041438 183 LNHLILDSNFLGGSIPR--SLSNFTNLVFLYLYNNSFSGSIPQQ----IGNLKSLFDMKLCINQ 240 (752)
Q Consensus 183 L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~l~l~~N~ 240 (752)
|++|+|++|+|+. +|. .+.++++|++|+|++|.++. +|.. +..+++|+.|+++.|.
T Consensus 90 L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~ 151 (176)
T 1a9n_A 90 LTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVK 151 (176)
T ss_dssp CCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECC
T ss_pred CCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCC
Confidence 8888888888864 444 77888888888888888874 3432 5555544444444443
No 391
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.59 E-value=1.6e-15 Score=161.31 Aligned_cols=125 Identities=13% Similarity=0.164 Sum_probs=94.9
Q ss_pred HHHHHhhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC------------C---------------------
Q 041438 494 EEIIRATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD------------N--------------------- 540 (752)
Q Consensus 494 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------~--------------------- 540 (752)
..+.+...=|++...||+|++|.||+|+..+|+.||||+++..... .
T Consensus 88 ~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL 167 (397)
T 4gyi_A 88 HTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFM 167 (397)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHH
Confidence 3444444459999999999999999999889999999987542110 0
Q ss_pred -----c-cccC-----CceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCC
Q 041438 541 -----F-CSHP-----RQSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKN 609 (752)
Q Consensus 541 -----~-~~~~-----~~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~N 609 (752)
. ...+ ...++||||++|+++.++... +....++.|++.+|.|||+. |||||||||.|
T Consensus 168 ~rL~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~N 235 (397)
T 4gyi_A 168 KALYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH---GLIHGDFNEFN 235 (397)
T ss_dssp HHHHHTTCSCCCEEEEETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTS
T ss_pred HHHHhcCCCCCeeeeccCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHH
Confidence 0 0001 123699999999887654321 23456889999999999999 99999999999
Q ss_pred EEeCCCC----------ceEEeecccceecc
Q 041438 610 VLLDLGY----------EAHVSDFRIAKFLN 630 (752)
Q Consensus 610 Ill~~~~----------~~kl~DfG~a~~~~ 630 (752)
||+++++ .+.|+||+-+....
T Consensus 236 ILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 236 ILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred EEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 9998776 38999999887643
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.59 E-value=1.8e-17 Score=162.62 Aligned_cols=149 Identities=23% Similarity=0.250 Sum_probs=74.7
Q ss_pred CcEEEccccccCCCCCc------ccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccc
Q 041438 257 LSLLDVSINNITGNIPF------EIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLE 330 (752)
Q Consensus 257 L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 330 (752)
++.++++.|.++|..|. .+..+++|++|+|++|.+++ +| .+.++++|+.|++++|+++ .+|..+..+++|+
T Consensus 20 l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~ 96 (198)
T 1ds9_A 20 VVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLE 96 (198)
T ss_dssp CCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCS
T ss_pred ccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCC
Confidence 33444444444444433 45555555555555555554 33 4555555555555555554 2333444444455
Q ss_pred eeeccccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCC-cccccccccceEEccCC
Q 041438 331 YLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKIS-SRICRMESLEKLNLSYN 409 (752)
Q Consensus 331 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N 409 (752)
+|+|++|++++++ .+..+++|++|+++ +|++++..+ ..+..+++|++|++++|
T Consensus 97 ~L~L~~N~l~~l~--~~~~l~~L~~L~l~------------------------~N~i~~~~~~~~l~~l~~L~~L~l~~N 150 (198)
T 1ds9_A 97 ELWISYNQIASLS--GIEKLVNLRVLYMS------------------------NNKITNWGEIDKLAALDKLEDLLLAGN 150 (198)
T ss_dssp EEEEEEEECCCHH--HHHHHHHSSEEEES------------------------EEECCCHHHHHHHTTTTTCSEEEECSC
T ss_pred EEECcCCcCCcCC--ccccCCCCCEEECC------------------------CCcCCchhHHHHHhcCCCCCEEEecCC
Confidence 5555555444422 34444444444444 444443222 33455555566666666
Q ss_pred cCCcCCch----------hhhccCCCcEEEccCCccc
Q 041438 410 NLSGLIPR----------CFEELHGLLHIDISYNKLE 436 (752)
Q Consensus 410 ~l~~~~p~----------~~~~l~~L~~L~ls~N~l~ 436 (752)
++++.+|. .+..+++|+.|| +|.++
T Consensus 151 ~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 151 PLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred ccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 65555443 366777777776 55554
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.59 E-value=2.5e-15 Score=144.24 Aligned_cols=108 Identities=23% Similarity=0.198 Sum_probs=54.7
Q ss_pred CCCCCCCEEecCCCcCcCCCCccccCCc-ccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhccccccc
Q 041438 276 GESPQLQYLDLSSNYIVGEIPTQLGNII-YLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLY 354 (752)
Q Consensus 276 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 354 (752)
..+++|+.|++++|.++. +|. +..+. +|+.|++++|.+++. ..|..+++|++|+|++|.|+++++..|..+++|+
T Consensus 16 ~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp ECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred CCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 344555555555555553 232 22222 555555555555543 3455555566666666665555444455555555
Q ss_pred EEEcCCCcCccccch--hccccccCCeeecCCccCC
Q 041438 355 YLNLSHNKLSQQIPI--ELDNLIHLSELDLSHNFLG 388 (752)
Q Consensus 355 ~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~ 388 (752)
+|+|++|+|+. +|. .+..+++|+.|++++|.++
T Consensus 92 ~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 92 ELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp EEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG
T ss_pred EEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC
Confidence 55555555532 232 4444444444444444443
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.59 E-value=2.6e-17 Score=161.36 Aligned_cols=115 Identities=24% Similarity=0.216 Sum_probs=92.2
Q ss_pred ccCCCcccceeeccccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCccccccccc
Q 041438 322 ELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESL 401 (752)
Q Consensus 322 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 401 (752)
.+..+++|++|+|++|.++++ | .+..+++|++|++++|+++ .+|..+..+++|++|+|++|++++. | .+..+++|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~l-~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~l-~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEKI-S-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL-S-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESCC-C-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCCH-H-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCccc-c-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCcC-C-ccccCCCC
Confidence 566677777777777777774 3 6777778888888888876 4566777778888888888888774 3 57889999
Q ss_pred ceEEccCCcCCcCCc-hhhhccCCCcEEEccCCcccCcCCC
Q 041438 402 EKLNLSYNNLSGLIP-RCFEELHGLLHIDISYNKLEGHIPN 441 (752)
Q Consensus 402 ~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~ 441 (752)
+.|+|++|++++..+ ..+..+++|++|++++|++++.+|.
T Consensus 118 ~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 999999999998654 5789999999999999999888765
No 395
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.58 E-value=3.5e-14 Score=154.81 Aligned_cols=296 Identities=11% Similarity=0.030 Sum_probs=235.9
Q ss_pred cccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCc
Q 041438 120 ELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPR 199 (752)
Q Consensus 120 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 199 (752)
.++.+...+|.++++|+.+.|.. .++.+...+|.++++|+.++|..| ++.+-..+|.++.+|+.+.+..+ +..+...
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~ 134 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVE 134 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTT
T ss_pred eEeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecce
Confidence 46778889999999999999975 488788899999999999999865 66666788999999999888765 5557778
Q ss_pred CccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCCCCcEEEccccccCCCCCcccCCCC
Q 041438 200 SLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCPQLSLLDVSINNITGNIPFEIGESP 279 (752)
Q Consensus 200 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 279 (752)
+|.++..++....... ......+|.++++|+.+.+..+..+ ++ ...|..+++|+.+++..| ++.+...+|.++.
T Consensus 135 aF~~~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~~~--I~-~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~ 208 (394)
T 4fs7_A 135 AFKGCDFKEITIPEGV--TVIGDEAFATCESLEYVSLPDSMET--LH-NGLFSGCGKLKSIKLPRN-LKIIRDYCFAECI 208 (394)
T ss_dssp TTTTCCCSEEECCTTC--CEECTTTTTTCTTCCEEECCTTCCE--EC-TTTTTTCTTCCBCCCCTT-CCEECTTTTTTCT
T ss_pred eeecccccccccCccc--cccchhhhcccCCCcEEecCCccce--ec-cccccCCCCceEEEcCCC-ceEeCchhhcccc
Confidence 8888876665544433 3345678999999999998765321 22 224788999999999876 6666778899999
Q ss_pred CCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhcccccccEEEcC
Q 041438 280 QLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLS 359 (752)
Q Consensus 280 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 359 (752)
.|+.+.+..+... +...+....+|+.+.+..+ ++.+....|.++.+|+.+.+..+. ..+....|.....++.+...
T Consensus 209 ~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~-~~i~~~~F~~~~~l~~~~~~ 284 (394)
T 4fs7_A 209 LLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNK-LRIGGSLFYNCSGLKKVIYG 284 (394)
T ss_dssp TCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTT-CEECSCTTTTCTTCCEEEEC
T ss_pred ccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCc-ceeeccccccccccceeccC
Confidence 9999999887653 3344555678999988654 444666789999999999998774 45667789999999999988
Q ss_pred CCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEccCCcCCcCCchhhhccCCCcEEEccCC
Q 041438 360 HNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEELHGLLHIDISYN 433 (752)
Q Consensus 360 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 433 (752)
.+.+ ....|..+.+|+.+.+.++ ++.+...+|.++.+|+.++|.++ ++.+...+|.++.+|+.+++..|
T Consensus 285 ~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 285 SVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp SSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred ceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 7654 4567899999999999765 77777888999999999999754 88787889999999999999766
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.56 E-value=1.1e-14 Score=138.81 Aligned_cols=105 Identities=25% Similarity=0.335 Sum_probs=72.5
Q ss_pred EEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCC
Q 041438 113 YLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNF 192 (752)
Q Consensus 113 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 192 (752)
++++++|+|+. +|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 13 ~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 45555666655 343332 667777777777777767777777777777777777776666667777777777777777
Q ss_pred CCCcCCcCccCCCcceEEeecccccccc
Q 041438 193 LGGSIPRSLSNFTNLVFLYLYNNSFSGS 220 (752)
Q Consensus 193 l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 220 (752)
|++..+..|.++++|++|+|++|.++..
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 7776666677777777777777777643
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.53 E-value=2.6e-14 Score=136.67 Aligned_cols=104 Identities=24% Similarity=0.334 Sum_probs=77.2
Q ss_pred EEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCC
Q 041438 113 YLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNF 192 (752)
Q Consensus 113 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 192 (752)
.+++++|+++. +|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 16 ~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 46667777754 344443 677778888888877777777778888888888888877666667778888888888888
Q ss_pred CCCcCCcCccCCCcceEEeeccccccc
Q 041438 193 LGGSIPRSLSNFTNLVFLYLYNNSFSG 219 (752)
Q Consensus 193 l~~~~p~~~~~l~~L~~L~L~~N~l~~ 219 (752)
|++..+..|.++++|++|+|++|.+..
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred cceeCHHHhccccCCCEEEeCCCCccc
Confidence 887666667788888888888887763
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=3.1e-14 Score=135.66 Aligned_cols=106 Identities=26% Similarity=0.248 Sum_probs=88.4
Q ss_pred CCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeecc
Q 041438 135 LEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYN 214 (752)
Q Consensus 135 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 214 (752)
.+.|++++|+|+. +|..+ .++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 5789999999985 56555 38899999999999988899999999999999999999988888889999999999999
Q ss_pred ccccccccccccCccccccccccccccCC
Q 041438 215 NSFSGSIPQQIGNLKSLFDMKLCINQLNG 243 (752)
Q Consensus 215 N~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 243 (752)
|+|++..+..|.++++|+.|++++|.++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 99998777777777766666666665553
No 399
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.49 E-value=1.1e-12 Score=142.72 Aligned_cols=319 Identities=10% Similarity=0.114 Sum_probs=190.7
Q ss_pred ccccccCCCC-CCCEEECCCCcccccCCccCcCCCCCCeeecCCCc---ccccCCcccccccccceeeccCcccCCCCCc
Q 041438 100 LLEFSFSSFP-HLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNK---LSGHIPSEISLLTHLTILHISRNQLNGSIPH 175 (752)
Q Consensus 100 l~~~~f~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 175 (752)
+.+.+|.+.. .|+.+.+..+ ++.+...+|.++++|+.+.+..|. ++.+...+|.+..+|+.+.+..+ ++.+...
T Consensus 54 Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~ 131 (394)
T 4gt6_A 54 IGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSE 131 (394)
T ss_dssp ECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTT
T ss_pred cCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhh
Confidence 3456788874 5999999754 888889999999999999998774 77777888999999999888755 5556677
Q ss_pred ccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCCCCCCCCCC
Q 041438 176 EVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPLSIDWGRCP 255 (752)
Q Consensus 176 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~ 255 (752)
+|.+..+|+.+.+..+ +..+....|.++.+|+.+.+.++ ++.+...+|.+ ..|+.+.+..+-.. . ....|..+.
T Consensus 132 aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i--~~~af~~c~ 205 (394)
T 4gt6_A 132 AFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-I--GTNAFSECF 205 (394)
T ss_dssp TTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-E--CTTTTTTCT
T ss_pred hhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-c--ccchhhhcc
Confidence 8899999999999754 45467778899999999988765 44455556654 45666655433211 0 112355666
Q ss_pred CCcEEEccccccCCCCCcc-------------cCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcc
Q 041438 256 QLSLLDVSINNITGNIPFE-------------IGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGE 322 (752)
Q Consensus 256 ~L~~L~Ls~N~l~~~~p~~-------------~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 322 (752)
.++......+......-.. +.....+..+.+.. .++.....+|.++.+|+.+.+.++..+ +...+
T Consensus 206 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~a 283 (394)
T 4gt6_A 206 ALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVVS-IGTGA 283 (394)
T ss_dssp TCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCCE-ECTTT
T ss_pred ccceecccccccccccceeecccccccccccccccccccceEEcCC-cceEcccceeeecccccEEecccccce-ecCcc
Confidence 6766665544432111100 11122233333322 222233445666666666666544332 44555
Q ss_pred cCCCcccceeeccccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccc
Q 041438 323 LGSLINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLE 402 (752)
Q Consensus 323 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 402 (752)
|.++++|+.+.+. +.++.+...+|.++.+|+.++|..+ ++.+...+|.++++|+.+.|..+ ++.+...+|.++.+|+
T Consensus 284 F~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~ 360 (394)
T 4gt6_A 284 FMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALN 360 (394)
T ss_dssp TTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCC
T ss_pred cccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCC
Confidence 6666666666664 4455555566666666666666543 44455556666666666666433 5555555666666666
Q ss_pred eEEccCCcCCcCCchhhhccCCCcEEEccCCc
Q 041438 403 KLNLSYNNLSGLIPRCFEELHGLLHIDISYNK 434 (752)
Q Consensus 403 ~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 434 (752)
.+++.+|.... ..+....+|+.+.+..|.
T Consensus 361 ~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 361 NIEYSGSRSQW---NAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp EEEESSCHHHH---HTCBCCCCC---------
T ss_pred EEEECCceeeh---hhhhccCCCCEEEeCCCC
Confidence 66666554321 234445555555554443
No 400
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.49 E-value=7.3e-14 Score=133.55 Aligned_cols=104 Identities=25% Similarity=0.282 Sum_probs=85.7
Q ss_pred CeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccc
Q 041438 136 EYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNN 215 (752)
Q Consensus 136 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 215 (752)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999997 5566554 88999999999999888999999999999999999999887778899999999999999
Q ss_pred cccccccccccCccccccccccccccC
Q 041438 216 SFSGSIPQQIGNLKSLFDMKLCINQLN 242 (752)
Q Consensus 216 ~l~~~~p~~~~~l~~L~~l~l~~N~l~ 242 (752)
+|++..+..|.++++|+.|++++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 998766666776666665555555554
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.42 E-value=6e-12 Score=137.04 Aligned_cols=299 Identities=11% Similarity=0.099 Sum_probs=218.2
Q ss_pred ccccccCCCCCCCEEECCCCc---ccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcc
Q 041438 100 LLEFSFSSFPHLAYLDLYNNE---LFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHE 176 (752)
Q Consensus 100 l~~~~f~~l~~L~~L~L~~n~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 176 (752)
+.+.+|.++++|+.+.+..|. ++.+...+|.++.+|+.+.+..+ ++.+...+|.+..+|+.+.+..+ +..+...+
T Consensus 78 Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~ 155 (394)
T 4gt6_A 78 IGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGM 155 (394)
T ss_dssp ECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTT
T ss_pred EhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccc
Confidence 456789999999999998764 77888899999999999988765 66677889999999999999754 45466788
Q ss_pred cCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccccccccCccccccccccccccCCCcCC---------
Q 041438 177 VGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSIPQQIGNLKSLFDMKLCINQLNGAIPL--------- 247 (752)
Q Consensus 177 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~--------- 247 (752)
|....+|+.+.+..+ ++.+...+|.+ .+|+.+.+..+-. .....+|.+..++.......+........
T Consensus 156 F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~-~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (394)
T 4gt6_A 156 FSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVT-RIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGD 232 (394)
T ss_dssp TTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCC-EECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSC
T ss_pred eecccccccccccce-eeEeccccccc-cceeEEEECCccc-ccccchhhhccccceecccccccccccceeeccccccc
Confidence 999999999999876 55566667765 6799999876543 35566777777776665544332211000
Q ss_pred --CCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCC
Q 041438 248 --SIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGS 325 (752)
Q Consensus 248 --~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 325 (752)
...+.....+..+.+. +.++..-..+|..+..|+.+.+..+..+ .....|.++.+|+.+.+. +.++.+...+|.+
T Consensus 233 ~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~ 309 (394)
T 4gt6_A 233 YALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAG 309 (394)
T ss_dssp EEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTT
T ss_pred ccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecC
Confidence 0011122344455543 3344455678889999999999876553 566788999999999996 5677677889999
Q ss_pred CcccceeeccccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEE
Q 041438 326 LINLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLN 405 (752)
Q Consensus 326 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 405 (752)
+.+|+.++|..+ ++.+...+|.++.+|+.+.+..+ ++.+...+|.++++|+.+++.+|.... ..+....+|+.+.
T Consensus 310 c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~ 384 (394)
T 4gt6_A 310 CISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLP 384 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----
T ss_pred CCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEE
Confidence 999999999864 88888889999999999999755 777778899999999999999886532 4566677888888
Q ss_pred ccCCcC
Q 041438 406 LSYNNL 411 (752)
Q Consensus 406 L~~N~l 411 (752)
+..|.+
T Consensus 385 i~~~~~ 390 (394)
T 4gt6_A 385 VAPGSI 390 (394)
T ss_dssp ------
T ss_pred eCCCCE
Confidence 776654
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.39 E-value=6.6e-13 Score=141.98 Aligned_cols=89 Identities=20% Similarity=0.139 Sum_probs=43.0
Q ss_pred CcCCCCCCeeecCC-CcccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcc
Q 041438 129 ISNLSKLEYLDFLT-NKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNL 207 (752)
Q Consensus 129 ~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 207 (752)
|..+++|++|+|++ |+|+++.+..|.+|++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|..++ |
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L 105 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-L 105 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-C
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-c
Confidence 44444444444443 444444444444444444444444444444444444445555555555555444444444443 5
Q ss_pred eEEeecccccc
Q 041438 208 VFLYLYNNSFS 218 (752)
Q Consensus 208 ~~L~L~~N~l~ 218 (752)
+.|+|++|.|.
T Consensus 106 ~~l~l~~N~~~ 116 (347)
T 2ifg_A 106 QELVLSGNPLH 116 (347)
T ss_dssp CEEECCSSCCC
T ss_pred eEEEeeCCCcc
Confidence 55555555554
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.39 E-value=5e-13 Score=142.92 Aligned_cols=109 Identities=25% Similarity=0.318 Sum_probs=96.1
Q ss_pred CcccceeeCCCCCEEEEEcCCCCCcccccccccCCCCCCCEEECCC-CcccccCCccCcCCCCCCeeecCCCcccccCCc
Q 041438 73 CTWSGIHCNHAGRVFGINLTSISLNGTLLEFSFSSFPHLAYLDLYN-NELFDIIPPQISNLSKLEYLDFLTNKLSGHIPS 151 (752)
Q Consensus 73 c~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~f~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 151 (752)
|.|.+|.|...+ +|.+ +++ +..+++|++|+|++ |+|+++.+..|++|++|++|+|++|+|+++.|.
T Consensus 8 C~~~~v~~~~~n----------~l~~-ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRCTRDG----------ALDS-LHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEECCSSC----------CCTT-TTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEcCCCC----------CCCc-cCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 899999886431 2332 444 88999999999996 999999999999999999999999999999999
Q ss_pred ccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCCCCCC
Q 041438 152 EISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSNFLGG 195 (752)
Q Consensus 152 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 195 (752)
.|.+|++|++|+|++|+|++..+..|..++ |+.|+|++|.+..
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 999999999999999999987777787777 9999999999985
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.39 E-value=1.6e-14 Score=155.49 Aligned_cols=167 Identities=23% Similarity=0.212 Sum_probs=102.0
Q ss_pred CCCcEEEccccccCCCCCccc----C-CCCCCCEEecCCCcCcCCCCccc-cCCcccCEEEccCCcCcccCCccc-----
Q 041438 255 PQLSLLDVSINNITGNIPFEI----G-ESPQLQYLDLSSNYIVGEIPTQL-GNIIYLNRISLSGNKLSGRIPGEL----- 323 (752)
Q Consensus 255 ~~L~~L~Ls~N~l~~~~p~~~----~-~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~----- 323 (752)
+.|+.|+|++|.|+......+ . ..++|++|+|++|.|+......+ ..+.+|+.|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 456677777777765433222 2 22578888888887764333222 234567777777777764433333
Q ss_pred CCCcccceeecccccccccc----chhhcccccccEEEcCCCcCcccc----chhccccccCCeeecCCccCCCCC----
Q 041438 324 GSLINLEYLDLSANHLSNFV----LESLGSLVKLYYLNLSHNKLSQQI----PIELDNLIHLSELDLSHNFLGEKI---- 391 (752)
Q Consensus 324 ~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~~---- 391 (752)
...++|++|+|++|.|+... +..+...++|++|+|++|+|+... +..+...++|++|+|++|.|+...
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 23567777778777776533 233456677777777777776432 445566667777777777776532
Q ss_pred CcccccccccceEEccCCcCCcCCchhhhc
Q 041438 392 SSRICRMESLEKLNLSYNNLSGLIPRCFEE 421 (752)
Q Consensus 392 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 421 (752)
+..+...++|++|+|++|.|+......+..
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred HHHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 223334567777777777776654444443
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.36 E-value=5.8e-14 Score=151.15 Aligned_cols=160 Identities=22% Similarity=0.273 Sum_probs=125.9
Q ss_pred CCCCCEEecCCCcCcCCCCccccCC-----cccCEEEccCCcCcccCCccc-CCCcccceeeccccccccccchhhc---
Q 041438 278 SPQLQYLDLSSNYIVGEIPTQLGNI-----IYLNRISLSGNKLSGRIPGEL-GSLINLEYLDLSANHLSNFVLESLG--- 348 (752)
Q Consensus 278 l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~--- 348 (752)
++.|+.|+|++|.|+......+... .+|+.|+|++|.++......+ ..+++|++|+|++|.|+......+.
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 4679999999999986544444333 799999999999975433333 3567899999999999887666653
Q ss_pred --ccccccEEEcCCCcCccc----cchhccccccCCeeecCCccCCCCC----CcccccccccceEEccCCcCCcC----
Q 041438 349 --SLVKLYYLNLSHNKLSQQ----IPIELDNLIHLSELDLSHNFLGEKI----SSRICRMESLEKLNLSYNNLSGL---- 414 (752)
Q Consensus 349 --~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~---- 414 (752)
..++|+.|+|++|.|+.. ++..+..+++|++|+|++|.|++.. +..+...++|+.|+|++|.|+..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 457899999999999753 3445577899999999999997643 45566778999999999999864
Q ss_pred CchhhhccCCCcEEEccCCcccC
Q 041438 415 IPRCFEELHGLLHIDISYNKLEG 437 (752)
Q Consensus 415 ~p~~~~~l~~L~~L~ls~N~l~~ 437 (752)
++..+...++|++|||++|.+++
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHHhCCCCCEEeccCCCCCH
Confidence 34455667999999999999874
No 406
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.25 E-value=3e-10 Score=122.83 Aligned_cols=131 Identities=12% Similarity=0.119 Sum_probs=61.9
Q ss_pred cccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCcccceeeccccccccccchhhccccc
Q 041438 273 FEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLINLEYLDLSANHLSNFVLESLGSLVK 352 (752)
Q Consensus 273 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 352 (752)
..+....+|+.+.+..+ +.......|.++..|+.+.+..+ ++.+...+|.++.+|+.+.+.. .+..+...+|.++.+
T Consensus 211 ~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~-~i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 211 YGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYA-KVKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECC-CCSEECTTTTTTCTT
T ss_pred cccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccccc-cceeccccccccccc
Confidence 34444455555555433 22233344455555555555443 3334444455555555555533 244444445555555
Q ss_pred ccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccccccceEEcc
Q 041438 353 LYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLS 407 (752)
Q Consensus 353 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 407 (752)
|+.+.+.++.++.+....|.++.+|+.++|..+ ++.+...+|.++.+|+.+.+.
T Consensus 288 L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 288 LTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp CCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred cccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 555555555554444445555555555555432 333334444444555544443
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.19 E-value=1.2e-09 Score=117.98 Aligned_cols=284 Identities=11% Similarity=-0.006 Sum_probs=199.4
Q ss_pred ccccccCCCCCCCEEECCCCcccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccCcccCCCCCcccCC
Q 041438 100 LLEFSFSSFPHLAYLDLYNNELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQ 179 (752)
Q Consensus 100 l~~~~f~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 179 (752)
+.+.+|.++.+|+.++|..+ ++.+...+|.++ +|+.+.+..+ ++.+...+|.+ .+|+.+.+..+ ++..-..+|.+
T Consensus 60 Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~-~~~i~~~~F~~ 134 (379)
T 4h09_A 60 IGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGA-TTEIGNYIFYN 134 (379)
T ss_dssp ECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTT-CCEECTTTTTT
T ss_pred hHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCc-ccccccccccc
Confidence 44667888888888888644 777778888887 6777777644 55566667765 47888888765 33244455555
Q ss_pred CCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccccccc------------cccccCccccccccccccccCCCcCC
Q 041438 180 LNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSFSGSI------------PQQIGNLKSLFDMKLCINQLNGAIPL 247 (752)
Q Consensus 180 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~------------p~~~~~l~~L~~l~l~~N~l~~~~~~ 247 (752)
. +|+.+.+..+ ++.+....|.++.+++.+.+..+...... ...+.....+..+.+..+. . ...
T Consensus 135 ~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~i~ 209 (379)
T 4h09_A 135 S-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTV-K--TVT 209 (379)
T ss_dssp C-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTC-C--EEC
T ss_pred c-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccce-e--EEe
Confidence 4 5666665543 45466677888888888877665432111 1112222222222221111 0 001
Q ss_pred CCCCCCCCCCcEEEccccccCCCCCcccCCCCCCCEEecCCCcCcCCCCccccCCcccCEEEccCCcCcccCCcccCCCc
Q 041438 248 SIDWGRCPQLSLLDVSINNITGNIPFEIGESPQLQYLDLSSNYIVGEIPTQLGNIIYLNRISLSGNKLSGRIPGELGSLI 327 (752)
Q Consensus 248 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 327 (752)
...+..+.+|+.+.+..+ ++.....+|..+..|+.+.+..+ ++......|.++.+|+.+.+..+ +..+....|.+++
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~ 286 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccc
Confidence 123566788888888654 55566778889999999999877 66566788999999999999754 6667778899999
Q ss_pred ccceeeccccccccccchhhcccccccEEEcCCCcCccccchhccccccCCeeecCCccCCCCCCcccccc
Q 041438 328 NLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRM 398 (752)
Q Consensus 328 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 398 (752)
+|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.+...+|.++++|+.+.+..+ ++.+-..+|.+.
T Consensus 287 ~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 287 NLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp TCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred ccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 9999999999999999999999999999999765 77777889999999999999765 555555566554
No 408
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=99.02 E-value=1.5e-12 Score=131.99 Aligned_cols=140 Identities=21% Similarity=0.175 Sum_probs=81.3
Q ss_pred CCCcccceeeCCCC-CEEEEEcCC---CCCcccccccccCCCC---------CCCEEECCCCcccccCCccCcCCCCCCe
Q 041438 71 SLCTWSGIHCNHAG-RVFGINLTS---ISLNGTLLEFSFSSFP---------HLAYLDLYNNELFDIIPPQISNLSKLEY 137 (752)
Q Consensus 71 ~~c~w~gv~C~~~~-~v~~l~l~~---~~l~g~l~~~~f~~l~---------~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 137 (752)
..|.|.|+.|+..+ +|+.+...+ ..+.|.+.+..+..+. .-+.|||+. |...+.|+.
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~----------l~~dp~L~~ 145 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKG----------LRSDPDLVA 145 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTT----------GGGCHHHHH
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHH----------cCCCcchhh
Confidence 46899999998543 554443333 2333444332221111 223344332 344444554
Q ss_pred --eecCCCccc---ccCCcccccccccceeeccCcccCC--CCCcccCCCCCCcEEEccCCCCCCcCCcCccCCC--cce
Q 041438 138 --LDFLTNKLS---GHIPSEISLLTHLTILHISRNQLNG--SIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFT--NLV 208 (752)
Q Consensus 138 --L~L~~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~ 208 (752)
++++.|+.. +..+....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+
T Consensus 146 ~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~ 223 (267)
T 3rw6_A 146 QNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLE 223 (267)
T ss_dssp TTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCS
T ss_pred cCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcc
Confidence 666677432 2222223467778888888888876 3456666777888888888888765 2344444 788
Q ss_pred EEeecccccccccc
Q 041438 209 FLYLYNNSFSGSIP 222 (752)
Q Consensus 209 ~L~L~~N~l~~~~p 222 (752)
+|+|++|.+.+..|
T Consensus 224 ~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 224 ELWLDGNSLCDTFR 237 (267)
T ss_dssp EEECTTSTTGGGCS
T ss_pred eEEccCCcCccccC
Confidence 88888888776554
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.96 E-value=1e-10 Score=124.72 Aligned_cols=83 Identities=16% Similarity=0.286 Sum_probs=48.4
Q ss_pred CCCCCEEecCCCcCcCCCCccc---cCCcccCEEEccCCcCccc----CCcccCCCcccceeeccccccccccchhhcc-
Q 041438 278 SPQLQYLDLSSNYIVGEIPTQL---GNIIYLNRISLSGNKLSGR----IPGELGSLINLEYLDLSANHLSNFVLESLGS- 349 (752)
Q Consensus 278 l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~- 349 (752)
+++|++|+|++|.+....+..+ ..+++|++|+|+.|.+.+. ++..+..+++|+.|+|++|.|+......+..
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 4455555555555543222112 1355677777777766542 2333345678888888888887665555544
Q ss_pred cccccEEEcCCCc
Q 041438 350 LVKLYYLNLSHNK 362 (752)
Q Consensus 350 l~~L~~L~Ls~N~ 362 (752)
+ ...++++.|+
T Consensus 331 l--g~~~~~~~~~ 341 (362)
T 2ra8_A 331 L--PMKIDVSDSQ 341 (362)
T ss_dssp C--CSEEECCSBC
T ss_pred c--CCEEEecCCc
Confidence 2 4568888887
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.96 E-value=1.3e-10 Score=123.88 Aligned_cols=85 Identities=20% Similarity=0.276 Sum_probs=63.2
Q ss_pred CCcccCEEEccCCcCcccCCccc---CCCcccceeeccccccccccc----hhhcccccccEEEcCCCcCccccchhccc
Q 041438 301 NIIYLNRISLSGNKLSGRIPGEL---GSLINLEYLDLSANHLSNFVL----ESLGSLVKLYYLNLSHNKLSQQIPIELDN 373 (752)
Q Consensus 301 ~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 373 (752)
.+++|+.|+|++|.+....+..+ ..+++|++|+|+.|.|++... ..+..+++|+.|+|++|.|+...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 47899999999999875333222 357899999999999987543 34456899999999999987554444443
Q ss_pred cccCCeeecCCcc
Q 041438 374 LIHLSELDLSHNF 386 (752)
Q Consensus 374 l~~L~~L~Ls~N~ 386 (752)
.- ...+++++|+
T Consensus 330 al-g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL-PMKIDVSDSQ 341 (362)
T ss_dssp HC-CSEEECCSBC
T ss_pred Hc-CCEEEecCCc
Confidence 11 4678999987
No 411
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.92 E-value=2.4e-09 Score=109.24 Aligned_cols=124 Identities=13% Similarity=0.052 Sum_probs=93.3
Q ss_pred HHHhhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCC---CC----------------------CccccCCceEE
Q 041438 496 IIRATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPL---PD----------------------NFCSHPRQSFI 550 (752)
Q Consensus 496 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~----------------------~~~~~~~~~~l 550 (752)
+....++|++...++.|+.+.||++... ++.+++|+..... .. .++.+.+..|+
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 3455678999999999999999999754 6899999876421 11 22344567899
Q ss_pred EEEeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCC----------------------------------
Q 041438 551 VYEYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNC---------------------------------- 596 (752)
Q Consensus 551 V~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---------------------------------- 596 (752)
||||++|.++.+... +......++.++++++..||+..
T Consensus 88 v~e~i~G~~l~~~~~--------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
T 3tm0_A 88 LMSEADGVLCSEEYE--------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE 159 (263)
T ss_dssp EEECCSSEEHHHHCC--------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred EEEecCCeehhhccC--------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence 999999999887632 11233578899999999999810
Q ss_pred ----------------------CCCeeecCCCCCCEEeCCCCceEEeeccccee
Q 041438 597 ----------------------FPPIVHWDISSKNVLLDLGYEAHVSDFRIAKF 628 (752)
Q Consensus 597 ----------------------~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~ 628 (752)
.+.++|+|++|.||+++++..+.|+||+.+..
T Consensus 160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 03589999999999998765567999988754
No 412
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.75 E-value=1.2e-08 Score=103.72 Aligned_cols=119 Identities=14% Similarity=0.087 Sum_probs=83.2
Q ss_pred hhcccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-----------------------CccccCCceEEEEEec
Q 041438 499 ATNDFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-----------------------NFCSHPRQSFIVYEYL 555 (752)
Q Consensus 499 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~lV~E~~ 555 (752)
...+|.+....+.|..+.||++...+|+.+++|........ .+....+..++||||+
T Consensus 18 ~~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 18 RLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TTTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred hcCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcccchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 34556654444566679999998777888999987653211 1223345679999999
Q ss_pred cCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCC---------------------------------------
Q 041438 556 ESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNC--------------------------------------- 596 (752)
Q Consensus 556 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--------------------------------------- 596 (752)
+|.++. ... . ....++.++++.+..+|+..
T Consensus 98 ~G~~l~--~~~------~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 1nd4_A 98 PGQDLL--SSH------L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 166 (264)
T ss_dssp SSEETT--TSC------C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred CCcccC--cCc------C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence 998874 211 1 12356778888888888741
Q ss_pred ----------------CCCeeecCCCCCCEEeCCCCceEEeeccccee
Q 041438 597 ----------------FPPIVHWDISSKNVLLDLGYEAHVSDFRIAKF 628 (752)
Q Consensus 597 ----------------~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~ 628 (752)
.+.++|+|++|.||+++++..+.|+|||.+..
T Consensus 167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 01399999999999998776667999998864
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.59 E-value=2.5e-08 Score=100.87 Aligned_cols=104 Identities=27% Similarity=0.263 Sum_probs=68.2
Q ss_pred CCCcccce--eecccccccc---ccchhhcccccccEEEcCCCcCcc--ccchhccccccCCeeecCCccCCCCCCcccc
Q 041438 324 GSLINLEY--LDLSANHLSN---FVLESLGSLVKLYYLNLSHNKLSQ--QIPIELDNLIHLSELDLSHNFLGEKISSRIC 396 (752)
Q Consensus 324 ~~l~~L~~--L~Ls~N~l~~---~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 396 (752)
...+.|.. ++++.|+... .......++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+.
T Consensus 138 ~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~ 215 (267)
T 3rw6_A 138 RSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELD 215 (267)
T ss_dssp GGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGG
T ss_pred CCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhh
Confidence 33444554 5666664332 222233567788888888888876 3456677788888888888888765 2334
Q ss_pred ccc--ccceEEccCCcCCcCCc-------hhhhccCCCcEEE
Q 041438 397 RME--SLEKLNLSYNNLSGLIP-------RCFEELHGLLHID 429 (752)
Q Consensus 397 ~l~--~L~~L~L~~N~l~~~~p-------~~~~~l~~L~~L~ 429 (752)
.+. +|++|+|++|.+++.+| ..+..+++|+.||
T Consensus 216 ~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 216 KIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 444 78888888888887555 2466778888775
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.54 E-value=2.8e-08 Score=95.47 Aligned_cols=63 Identities=19% Similarity=0.267 Sum_probs=34.1
Q ss_pred cccCCeeecCCccCCCC----CCcccccccccceEEc--cCCcCCcC----CchhhhccCCCcEEEccCCccc
Q 041438 374 LIHLSELDLSHNFLGEK----ISSRICRMESLEKLNL--SYNNLSGL----IPRCFEELHGLLHIDISYNKLE 436 (752)
Q Consensus 374 l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L--~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~ 436 (752)
.++|++|+|++|.|+.. +...+...++|++|+| ++|.|+.. +...+...+.|++|+|++|.+.
T Consensus 92 n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 92 NNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp CSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred CCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 34444555555544432 2233444456666666 56666543 2334455567777777777764
No 415
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.52 E-value=2.4e-07 Score=99.05 Aligned_cols=119 Identities=13% Similarity=0.211 Sum_probs=86.9
Q ss_pred cceeeccCCceEEEEEEeCCCcEEEEEccC--CCCC-----C----------------------CccccC---CceEEEE
Q 041438 505 AKHCIGKGGHGSVYIARVPSGEIFAVKKFH--SPLP-----D----------------------NFCSHP---RQSFIVY 552 (752)
Q Consensus 505 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~-----~----------------------~~~~~~---~~~~lV~ 552 (752)
..+.++.|.++.||++...+ ..+++|+.. .... . .++.+. +..|+||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 46789999999999998754 678889876 2210 0 122222 3478999
Q ss_pred EeccCCChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCC------------------------------------
Q 041438 553 EYLESGSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNC------------------------------------ 596 (752)
Q Consensus 553 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~------------------------------------ 596 (752)
||++|..+.+.. ...++..+...++.++++.|..||+..
T Consensus 121 e~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 121 EFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp ECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred EecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 999997774321 123677888999999999999999831
Q ss_pred -------------------CCCeeecCCCCCCEEeCCCCc--eEEeecccceec
Q 041438 597 -------------------FPPIVHWDISSKNVLLDLGYE--AHVSDFRIAKFL 629 (752)
Q Consensus 597 -------------------~~~ivH~DlKp~NIll~~~~~--~kl~DfG~a~~~ 629 (752)
.+.++|+|++|.||+++.++. +.|+||+.+...
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 247999999999999997653 689999998753
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.48 E-value=3.3e-08 Score=94.99 Aligned_cols=87 Identities=18% Similarity=0.205 Sum_probs=44.9
Q ss_pred Ccccceeecccccccccc----chhhcccccccEEEcCCCcCccc----cchhccccccCCeeec--CCccCCCCC----
Q 041438 326 LINLEYLDLSANHLSNFV----LESLGSLVKLYYLNLSHNKLSQQ----IPIELDNLIHLSELDL--SHNFLGEKI---- 391 (752)
Q Consensus 326 l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L--s~N~l~~~~---- 391 (752)
.++|++|+|++|.|.... ...+...+.|++|+|++|.|+.. +...+...++|++|+| ++|.|+...
T Consensus 64 ~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l 143 (185)
T 1io0_A 64 NTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEI 143 (185)
T ss_dssp CCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHH
T ss_pred CCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHH
Confidence 344555555555544322 22333345566666666665432 2334445556666666 556665432
Q ss_pred CcccccccccceEEccCCcCC
Q 041438 392 SSRICRMESLEKLNLSYNNLS 412 (752)
Q Consensus 392 ~~~~~~l~~L~~L~L~~N~l~ 412 (752)
...+...++|++|+|++|.+.
T Consensus 144 ~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 144 ANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCcCEEeccCCCCC
Confidence 223334466777777777664
No 417
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.37 E-value=1.4e-07 Score=98.31 Aligned_cols=161 Identities=19% Similarity=0.170 Sum_probs=104.7
Q ss_pred ceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-------------------------CccccC---CceEEEEEeccC
Q 041438 506 KHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-------------------------NFCSHP---RQSFIVYEYLES 557 (752)
Q Consensus 506 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~---~~~~lV~E~~~~ 557 (752)
.+.++.|....||++. +.+++|+....... ...... ...|+|||+++|
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 4568999999999863 56888875432000 111111 235899999999
Q ss_pred CChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------------
Q 041438 558 GSLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNC----------------------------------------- 596 (752)
Q Consensus 558 g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~----------------------------------------- 596 (752)
.++.+... ..++.+++..++.|+++.+..||+..
T Consensus 101 ~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 101 VPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp EECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred eECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 88765332 23666788888999999999998610
Q ss_pred --------------CCCeeecCCCCCCEEeCC--CCceEEeecccceeccCCCCCcccccCCCCc---cCcccccc----
Q 041438 597 --------------FPPIVHWDISSKNVLLDL--GYEAHVSDFRIAKFLNLDSSNWSKLAGTHGN---VAPELAYT---- 653 (752)
Q Consensus 597 --------------~~~ivH~DlKp~NIll~~--~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y---~aPE~~~~---- 653 (752)
.+.++|+|++|.||++++ ...+.|+||+.+....... .......+ ..|+....
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~----Dl~~~~~~~~~~~~~~~~~~l~~ 251 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN----DFISLMEDDEEYGMEFVSKILNH 251 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH----HHHTTCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH----HHHHHHhhccccCHHHHHHHHHH
Confidence 135899999999999997 4567899999987643210 01111111 22221110
Q ss_pred C-C---------CCCccchhhHHHHHHHHHhCCCCc
Q 041438 654 M-K---------VTEKCDVYSFGVLALEVIKGKHPR 679 (752)
Q Consensus 654 ~-~---------~~~ksDIwSlGvil~elltg~~pf 679 (752)
. . .....+.|++|.++|.+.+|..+|
T Consensus 252 Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 252 YKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 0 0 012258999999999999999886
No 418
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=97.97 E-value=1.5e-05 Score=83.64 Aligned_cols=118 Identities=17% Similarity=0.191 Sum_probs=85.8
Q ss_pred ccccceeeccCCceEEEEEEeCCCcEEEEEccCCCCC-----------------------CCccccCCceEEEEEeccCC
Q 041438 502 DFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLP-----------------------DNFCSHPRQSFIVYEYLESG 558 (752)
Q Consensus 502 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------------------~~~~~~~~~~~lV~E~~~~g 558 (752)
.....+.++.|....||++ |+.+++|+...... ...... +..|+||||++|.
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~-~~~~lvme~i~G~ 112 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ-SDRFNIMKYIKGE 112 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE-CSSCEEEECCCCB
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec-CCcEEEEeecCCc
Confidence 5566788999999999998 67788886543210 011111 4568999999998
Q ss_pred ChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCC-----------------------------------------
Q 041438 559 SLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCF----------------------------------------- 597 (752)
Q Consensus 559 ~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~----------------------------------------- 597 (752)
++..... ..++..+...++.++++.+..||+...
T Consensus 113 ~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (320)
T 3r70_A 113 RITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLE 187 (320)
T ss_dssp CCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred ccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchH
Confidence 8864321 125667778888888888888885421
Q ss_pred -------------------CCeeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 598 -------------------PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 598 -------------------~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
+.++|+|++|.||+++.+..+.|+||+.+...
T Consensus 188 ~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 188 HIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999998666799999998764
No 419
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.74 E-value=1.9e-05 Score=74.00 Aligned_cols=80 Identities=19% Similarity=0.197 Sum_probs=32.1
Q ss_pred cCEEEccCCcCcccCCcccCCCcccceeeccccc-cccccchhhccc----ccccEEEcCCCc-CccccchhccccccCC
Q 041438 305 LNRISLSGNKLSGRIPGELGSLINLEYLDLSANH-LSNFVLESLGSL----VKLYYLNLSHNK-LSQQIPIELDNLIHLS 378 (752)
Q Consensus 305 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~ 378 (752)
|+.||++++.++..--..+.++++|++|+|+++. |++.....+..+ ++|++|+|++|. ++...-..+..+++|+
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~ 142 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLK 142 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCC
Confidence 4444444444333222233444445555555442 444333333332 245555555442 4332222333333333
Q ss_pred eeecCC
Q 041438 379 ELDLSH 384 (752)
Q Consensus 379 ~L~Ls~ 384 (752)
.|+|++
T Consensus 143 ~L~L~~ 148 (176)
T 3e4g_A 143 YLFLSD 148 (176)
T ss_dssp EEEEES
T ss_pred EEECCC
Confidence 333333
No 420
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.73 E-value=1.4e-05 Score=74.96 Aligned_cols=84 Identities=13% Similarity=0.139 Sum_probs=58.1
Q ss_pred cccceeeccccccccccchhhcccccccEEEcCCCc-Cccccchhcccc----ccCCeeecCCcc-CCCCCCcccccccc
Q 041438 327 INLEYLDLSANHLSNFVLESLGSLVKLYYLNLSHNK-LSQQIPIELDNL----IHLSELDLSHNF-LGEKISSRICRMES 400 (752)
Q Consensus 327 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~~~~~~~l~~ 400 (752)
.+|+.|||+++.|+......+.++++|+.|+|+++. ++...-..+..+ ++|++|+|+++. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 478999999999888777778888888999988885 665444445543 357777777763 55544444555666
Q ss_pred cceEEccCCc
Q 041438 401 LEKLNLSYNN 410 (752)
Q Consensus 401 L~~L~L~~N~ 410 (752)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 6666666653
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.63 E-value=0.00012 Score=74.54 Aligned_cols=114 Identities=18% Similarity=0.185 Sum_probs=78.4
Q ss_pred eeccCCce-EEEEEEe-CCCcEEEEEccCCCC----------------------CCCccccCCceEEEEEeccCCChHHH
Q 041438 508 CIGKGGHG-SVYIARV-PSGEIFAVKKFHSPL----------------------PDNFCSHPRQSFIVYEYLESGSLDKI 563 (752)
Q Consensus 508 ~lg~G~~g-~Vy~~~~-~~~~~vavK~~~~~~----------------------~~~~~~~~~~~~lV~E~~~~g~L~~~ 563 (752)
.+..|..| .||+... .++..+++|+-.... .-.++.+.+..|+|||+++|.++.+.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~ 110 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQV 110 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETHHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccccc
Confidence 45556555 6998874 356788999653211 01345567788999999999888776
Q ss_pred hccCccccccCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------------------
Q 041438 564 LNNDASAKELGWTQRLNVIKGVADALFYLHNNC----------------------------------------------- 596 (752)
Q Consensus 564 l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~----------------------------------------------- 596 (752)
.... ......+..+++..|..||+..
T Consensus 111 ~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 183 (272)
T 4gkh_A 111 LEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEM 183 (272)
T ss_dssp HHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHH
T ss_pred ccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHH
Confidence 5321 1233456667777777777531
Q ss_pred --------CCCeeecCCCCCCEEeCCCCceEEeeccccee
Q 041438 597 --------FPPIVHWDISSKNVLLDLGYEAHVSDFRIAKF 628 (752)
Q Consensus 597 --------~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~ 628 (752)
.+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 184 ~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 184 HKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 11379999999999999877677999998864
No 422
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.54 E-value=0.00016 Score=75.04 Aligned_cols=114 Identities=16% Similarity=0.135 Sum_probs=75.2
Q ss_pred ceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC-------------------------Ccc-ccCCceEEEEEeccCCC
Q 041438 506 KHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD-------------------------NFC-SHPRQSFIVYEYLESGS 559 (752)
Q Consensus 506 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------------------------~~~-~~~~~~~lV~E~~~~g~ 559 (752)
.+.++.|....||+. |+.+++|+-...... .++ ...+..++||||++|..
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 466888988899988 567888875321100 112 13345789999999988
Q ss_pred hHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhC--------------------------------------------
Q 041438 560 LDKILNNDASAKELGWTQRLNVIKGVADALFYLHNN-------------------------------------------- 595 (752)
Q Consensus 560 L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-------------------------------------------- 595 (752)
+.+..-. .++..+...++.++++.|..||+.
T Consensus 100 l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 100 LGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp CHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred Cchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 7653211 133445555555555555555542
Q ss_pred -------------CCCCeeecCCCCCCEEeCC---CCc-eEEeeccccee
Q 041438 596 -------------CFPPIVHWDISSKNVLLDL---GYE-AHVSDFRIAKF 628 (752)
Q Consensus 596 -------------~~~~ivH~DlKp~NIll~~---~~~-~kl~DfG~a~~ 628 (752)
..+.++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2235799999999999987 455 48999998865
No 423
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.46 E-value=0.00021 Score=76.07 Aligned_cols=32 Identities=41% Similarity=0.416 Sum_probs=27.9
Q ss_pred CCeeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 598 PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 598 ~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
+.++|+|++|.||++++++.+.|+||+.+...
T Consensus 213 ~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 213 RHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp CEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred cEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 46899999999999987777889999998764
No 424
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.44 E-value=9.1e-05 Score=70.72 Aligned_cols=61 Identities=21% Similarity=0.295 Sum_probs=31.3
Q ss_pred ccCCeeecCCccCCCCC----CcccccccccceEEccCC---cCCc----CCchhhhccCCCcEEEccCCcc
Q 041438 375 IHLSELDLSHNFLGEKI----SSRICRMESLEKLNLSYN---NLSG----LIPRCFEELHGLLHIDISYNKL 435 (752)
Q Consensus 375 ~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~N---~l~~----~~p~~~~~l~~L~~L~ls~N~l 435 (752)
+.|+.|+|++|.|+..- ...+..-+.|++|+|++| .+.. .+...+..-+.|+.|+++.|..
T Consensus 98 ~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 98 PSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp SSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred CccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 44444444444443221 122333455677777654 3332 1334556667788888876654
No 425
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.30 E-value=0.00053 Score=72.72 Aligned_cols=31 Identities=23% Similarity=0.219 Sum_probs=26.4
Q ss_pred CCeeecCCCCCCEEeCCCCceEEeeccccee
Q 041438 598 PPIVHWDISSKNVLLDLGYEAHVSDFRIAKF 628 (752)
Q Consensus 598 ~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~ 628 (752)
+.++|+|+.|.||+++++..+.|+||+.+..
T Consensus 222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~ 252 (357)
T 3ats_A 222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVAL 252 (357)
T ss_dssp CEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred ceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence 4799999999999999644578999998865
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.26 E-value=0.00045 Score=72.68 Aligned_cols=31 Identities=29% Similarity=0.422 Sum_probs=27.7
Q ss_pred CCeeecCCCCCCEEeCCCCceEEeeccccee
Q 041438 598 PPIVHWDISSKNVLLDLGYEAHVSDFRIAKF 628 (752)
Q Consensus 598 ~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~ 628 (752)
+.++|+|+++.||+++.++.+.|+||+.+..
T Consensus 222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp CCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred CceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 4899999999999998778899999998754
No 427
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.22 E-value=0.00011 Score=70.08 Aligned_cols=87 Identities=20% Similarity=0.244 Sum_probs=40.9
Q ss_pred CCcccceeeccccccccccc----hhhcccccccEEEcCCCcCcccc----chhccccccCCeeecCCc---cCCCC---
Q 041438 325 SLINLEYLDLSANHLSNFVL----ESLGSLVKLYYLNLSHNKLSQQI----PIELDNLIHLSELDLSHN---FLGEK--- 390 (752)
Q Consensus 325 ~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N---~l~~~--- 390 (752)
.-+.|+.|+|++|+|..... +.+..-+.|+.|+|++|+|+... -..+..-+.|++|+|++| .+...
T Consensus 68 ~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~ 147 (197)
T 1pgv_A 68 NSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEM 147 (197)
T ss_dssp TCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHH
T ss_pred hCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHH
Confidence 33445555555555543322 22334455555555555554321 222333345666666543 22221
Q ss_pred -CCcccccccccceEEccCCcC
Q 041438 391 -ISSRICRMESLEKLNLSYNNL 411 (752)
Q Consensus 391 -~~~~~~~l~~L~~L~L~~N~l 411 (752)
+...+..-+.|+.|+++.|.+
T Consensus 148 ~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 148 DMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHhCCCcCeEeccCCCc
Confidence 223344456677777766654
No 428
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.19 E-value=0.00084 Score=68.85 Aligned_cols=57 Identities=16% Similarity=0.225 Sum_probs=40.7
Q ss_pred ccceeeccCCceEEEEEEeCCCcEEEEEccCCCCC---C-------------Cc--cccC-----CceEEEEEeccCCCh
Q 041438 504 DAKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLP---D-------------NF--CSHP-----RQSFIVYEYLESGSL 560 (752)
Q Consensus 504 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~-------------~~--~~~~-----~~~~lV~E~~~~g~L 560 (752)
...+.|+.|.++.||+++..+|+.++||+...... . .. ..-+ +..++||||++++.+
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~~~~lvme~l~g~~~ 97 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWDDRTLAMEWVDERPP 97 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEETTEEEEECCCCCCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEecCcEEEEEecccCCC
Confidence 44678999999999999988899999999643222 1 00 0000 235899999999875
No 429
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.96 E-value=0.0027 Score=60.82 Aligned_cols=102 Identities=18% Similarity=0.109 Sum_probs=66.3
Q ss_pred ChHHHhccCccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCCCCccc
Q 041438 559 SLDKILNNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSK 638 (752)
Q Consensus 559 ~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 638 (752)
+|.+++...+ .+++++++|.++.|.+.+|.-+-.+. .-..+=+.|..|++..+|.+...+ +.+.
T Consensus 34 SL~eIL~~~~--~PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 34 SLEEILRLYN--QPINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred cHHHHHHHcC--CCcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc-----------
Confidence 7899998665 56999999999999999987763211 111233456899999999888664 1111
Q ss_pred ccCCCCccCccccccCCCCCccchhhHHHHHHHHHhCCCC
Q 041438 639 LAGTHGNVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 678 (752)
Q Consensus 639 ~~gt~~y~aPE~~~~~~~~~ksDIwSlGvil~elltg~~p 678 (752)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123566888653 3456788899999999999864444
No 430
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=96.91 E-value=0.0022 Score=69.02 Aligned_cols=31 Identities=19% Similarity=0.268 Sum_probs=26.4
Q ss_pred CCeeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 598 PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 598 ~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
+.++|+|+.|.||+++.+ .++++||..+...
T Consensus 227 ~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~G 257 (397)
T 2olc_A 227 ETLIHGDLHTGSIFASEH-ETKVIDPEFAFYG 257 (397)
T ss_dssp CEEECSCCSGGGEEECSS-CEEECCCTTCEEE
T ss_pred CceeeCCCCcCcEEEeCC-CeEEEeCcccccC
Confidence 379999999999999865 5899999887753
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.83 E-value=0.0015 Score=58.04 Aligned_cols=35 Identities=23% Similarity=0.257 Sum_probs=15.8
Q ss_pred CCeeecCCCcccccCCcccccccccceeeccCccc
Q 041438 135 LEYLDFLTNKLSGHIPSEISLLTHLTILHISRNQL 169 (752)
Q Consensus 135 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 169 (752)
|++|+|++|+|+.+.+..|..+++|+.|+|++|.+
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 44444444444444444444444444444444433
No 432
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.78 E-value=0.0041 Score=67.48 Aligned_cols=77 Identities=12% Similarity=0.062 Sum_probs=46.8
Q ss_pred CCeeecCCCCCCEEeCCCCceEEeecccceeccCCCCCcccccC--CCCccCccccccCC---CCCccchhhHHHHHHHH
Q 041438 598 PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAG--THGNVAPELAYTMK---VTEKCDVYSFGVLALEV 672 (752)
Q Consensus 598 ~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~---~~~ksDIwSlGvil~el 672 (752)
+.++|+|++|.||+++.++ ++++||+.+........ ...... ...|.+|+...... .....++.+....+|+.
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D-la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD-IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH-HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH-HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 3899999999999998776 99999999876431110 000010 13456666543111 11234455777777777
Q ss_pred HhCC
Q 041438 673 IKGK 676 (752)
Q Consensus 673 ltg~ 676 (752)
++++
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.76 E-value=0.0019 Score=57.41 Aligned_cols=55 Identities=24% Similarity=0.258 Sum_probs=30.2
Q ss_pred eeeccCcccC-CCCCcccCCCCCCcEEEccCCCCCCcCCcCccCCCcceEEeeccccc
Q 041438 161 ILHISRNQLN-GSIPHEVGQLNFLNHLILDSNFLGGSIPRSLSNFTNLVFLYLYNNSF 217 (752)
Q Consensus 161 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 217 (752)
.++.+++.++ ..+|..+. .+|++|+|++|+|+.+.+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4455555554 23333221 2456666666666655556666666666666666655
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.67 E-value=0.0067 Score=62.46 Aligned_cols=30 Identities=23% Similarity=0.319 Sum_probs=25.5
Q ss_pred CeeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 599 PIVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 599 ~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
.++|+|+.|.||+ ..++.+.++||..+...
T Consensus 174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 174 AACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred eeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 5899999999999 55667899999988753
No 435
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.48 E-value=0.0089 Score=62.06 Aligned_cols=138 Identities=15% Similarity=0.166 Sum_probs=76.9
Q ss_pred cchHHHHHHhhccccc-----ceeeccCCceEEEEEEeCCCcEEEEEccCCC-CCC--------------------Ccc-
Q 041438 490 KIVYEEIIRATNDFDA-----KHCIGKGGHGSVYIARVPSGEIFAVKKFHSP-LPD--------------------NFC- 542 (752)
Q Consensus 490 ~~~~~~~~~~~~~y~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~--------------------~~~- 542 (752)
.++-+++......|.+ .+.|+.|....+|++...+| .+++|..... ... ...
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~vP~~~~ 84 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLPLP 84 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCCCcccC
Confidence 3555666666666654 34567788899999987655 6889987652 111 011
Q ss_pred --------ccCCceEEEEEeccCCChHH----H----------hccC----ccc-----cccCHHHHHH-----------
Q 041438 543 --------SHPRQSFIVYEYLESGSLDK----I----------LNND----ASA-----KELGWTQRLN----------- 580 (752)
Q Consensus 543 --------~~~~~~~lV~E~~~~g~L~~----~----------l~~~----~~~-----~~l~~~~~~~----------- 580 (752)
...+..+++|||++|..+.. . ++.. ... ....|.....
T Consensus 85 ~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 164 (322)
T 2ppq_A 85 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK 164 (322)
T ss_dssp BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred CCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhh
Confidence 11245689999999865321 0 1110 000 0011211100
Q ss_pred -HHHHHHHHHHHHHhC----CCCCeeecCCCCCCEEeCCCCceEEeeccccee
Q 041438 581 -VIKGVADALFYLHNN----CFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKF 628 (752)
Q Consensus 581 -i~~qi~~aL~~lH~~----~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~ 628 (752)
+...+...++++++. ..++++|+|+++.||+++++..+.|+||+.+..
T Consensus 165 ~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 165 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011244455666532 123799999999999998775568999988764
No 436
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.26 E-value=0.0082 Score=61.35 Aligned_cols=34 Identities=18% Similarity=0.209 Sum_probs=28.9
Q ss_pred ccccceeeccCCceEEEEEEeCCCcEEEEEccCC
Q 041438 502 DFDAKHCIGKGGHGSVYIARVPSGEIFAVKKFHS 535 (752)
Q Consensus 502 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~ 535 (752)
...-.+.+|.|..+.||+.+..+|+.|++|+...
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~ 49 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPD 49 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCT
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCC
Confidence 3455688999999999999999999999998653
No 437
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.13 E-value=0.0086 Score=61.90 Aligned_cols=55 Identities=15% Similarity=0.158 Sum_probs=39.2
Q ss_pred cceeeccCCceEEEEEEeCCCcEEEEEccCCCCCC------------------------CccccCCceEEEEEeccCCCh
Q 041438 505 AKHCIGKGGHGSVYIARVPSGEIFAVKKFHSPLPD------------------------NFCSHPRQSFIVYEYLESGSL 560 (752)
Q Consensus 505 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------------~~~~~~~~~~lV~E~~~~g~L 560 (752)
..+.|+.|....+|+... ++..+++|+....... .++...+..++||||+++..+
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 356789999999999986 4678889975432110 223344678999999998764
No 438
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=95.95 E-value=0.021 Score=59.51 Aligned_cols=32 Identities=31% Similarity=0.268 Sum_probs=27.8
Q ss_pred CCeeecCCCCCCEEeCCC----CceEEeecccceec
Q 041438 598 PPIVHWDISSKNVLLDLG----YEAHVSDFRIAKFL 629 (752)
Q Consensus 598 ~~ivH~DlKp~NIll~~~----~~~kl~DfG~a~~~ 629 (752)
+.++|||+.+.||+++.+ +.+.|+||+.+...
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 379999999999999874 67899999998764
No 439
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=95.92 E-value=0.037 Score=57.50 Aligned_cols=28 Identities=21% Similarity=0.173 Sum_probs=25.0
Q ss_pred CeeecCCCCCCEEeCCCCceEEeeccccee
Q 041438 599 PIVHWDISSKNVLLDLGYEAHVSDFRIAKF 628 (752)
Q Consensus 599 ~ivH~DlKp~NIll~~~~~~kl~DfG~a~~ 628 (752)
.++|+|+++.||+++ + .+.|+||+.+..
T Consensus 196 ~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 196 LRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp EECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred eeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 689999999999999 4 899999988765
No 440
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.18 E-value=0.055 Score=56.61 Aligned_cols=32 Identities=22% Similarity=0.202 Sum_probs=28.1
Q ss_pred CCeeecCCCCCCEEeCCCCceEEeecccceec
Q 041438 598 PPIVHWDISSKNVLLDLGYEAHVSDFRIAKFL 629 (752)
Q Consensus 598 ~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~ 629 (752)
+.++|+|+.+.||++++++.+.|+||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 37999999999999998788999999887653
No 441
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.29 E-value=0.13 Score=55.24 Aligned_cols=29 Identities=24% Similarity=0.375 Sum_probs=24.9
Q ss_pred eeecCCCCCCEEe------CCCCceEEeeccccee
Q 041438 600 IVHWDISSKNVLL------DLGYEAHVSDFRIAKF 628 (752)
Q Consensus 600 ivH~DlKp~NIll------~~~~~~kl~DfG~a~~ 628 (752)
++|+|+.+.||++ +++..++++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4566799999998865
No 442
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=91.90 E-value=0.27 Score=52.00 Aligned_cols=30 Identities=27% Similarity=0.346 Sum_probs=26.7
Q ss_pred CeeecCCCCCCEEeCCC----CceEEeeccccee
Q 041438 599 PIVHWDISSKNVLLDLG----YEAHVSDFRIAKF 628 (752)
Q Consensus 599 ~ivH~DlKp~NIll~~~----~~~kl~DfG~a~~ 628 (752)
.++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 221 ~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 221 VFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp EEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred EEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 68999999999999876 6899999998864
No 443
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=88.01 E-value=1.2 Score=47.81 Aligned_cols=29 Identities=17% Similarity=0.334 Sum_probs=26.1
Q ss_pred CeeecCCCCCCEEeCCCCceEEeeccccee
Q 041438 599 PIVHWDISSKNVLLDLGYEAHVSDFRIAKF 628 (752)
Q Consensus 599 ~ivH~DlKp~NIll~~~~~~kl~DfG~a~~ 628 (752)
.++|+|+.+.||+ +.++.+.++||..|..
T Consensus 263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 263 VFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 6899999999999 7788899999998875
No 444
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=79.31 E-value=1.7 Score=45.63 Aligned_cols=29 Identities=21% Similarity=0.348 Sum_probs=24.7
Q ss_pred CeeecCCCCCCEEeCCCCceEEeeccccee
Q 041438 599 PIVHWDISSKNVLLDLGYEAHVSDFRIAKF 628 (752)
Q Consensus 599 ~ivH~DlKp~NIll~~~~~~kl~DfG~a~~ 628 (752)
.++|+|+++.||+++++. +.++||..+..
T Consensus 213 ~l~HgDl~~~Nil~~~~~-~~lID~e~a~~ 241 (369)
T 3c5i_A 213 VFCHNDLQENNIINTNKC-LRLIDFEYSGF 241 (369)
T ss_dssp EEECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred EEEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence 689999999999998654 89999988864
No 445
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=79.11 E-value=1.3 Score=48.01 Aligned_cols=15 Identities=27% Similarity=0.454 Sum_probs=14.2
Q ss_pred CeeecCCCCCCEEeC
Q 041438 599 PIVHWDISSKNVLLD 613 (752)
Q Consensus 599 ~ivH~DlKp~NIll~ 613 (752)
.++|+|+.+.|||++
T Consensus 291 v~cHnDl~~gNIL~~ 305 (458)
T 2qg7_A 291 VLCHCDLLSSNIINT 305 (458)
T ss_dssp EEECSCCCGGGEEEC
T ss_pred eEEecCCCCCcEEee
Confidence 689999999999998
No 446
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=72.95 E-value=1.4 Score=47.51 Aligned_cols=30 Identities=27% Similarity=0.401 Sum_probs=24.8
Q ss_pred CeeecCCCCCCEEeCCC----------------------------CceEEeeccccee
Q 041438 599 PIVHWDISSKNVLLDLG----------------------------YEAHVSDFRIAKF 628 (752)
Q Consensus 599 ~ivH~DlKp~NIll~~~----------------------------~~~kl~DfG~a~~ 628 (752)
.++|+|+.+.||+++++ +.+.++||..|..
T Consensus 250 v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~~ 307 (429)
T 1nw1_A 250 TFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASY 307 (429)
T ss_dssp EEECSCCCGGGEEEEC------------------------------CCEECCCTTCEE
T ss_pred EEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCCc
Confidence 68999999999999875 6789999988764
No 447
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=68.15 E-value=2.3 Score=45.06 Aligned_cols=30 Identities=27% Similarity=0.378 Sum_probs=26.6
Q ss_pred CeeecCCCCCCEEeCCC------CceEEeeccccee
Q 041438 599 PIVHWDISSKNVLLDLG------YEAHVSDFRIAKF 628 (752)
Q Consensus 599 ~ivH~DlKp~NIll~~~------~~~kl~DfG~a~~ 628 (752)
.++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred eEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 68999999999999876 7899999988764
No 448
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=65.42 E-value=6.1 Score=37.77 Aligned_cols=82 Identities=9% Similarity=0.103 Sum_probs=60.2
Q ss_pred cCHHHHHHHHHHHHHHHH-HHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCCCCcccccCCCCccCcccc
Q 041438 573 LGWTQRLNVIKGVADALF-YLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELA 651 (752)
Q Consensus 573 l~~~~~~~i~~qi~~aL~-~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~ 651 (752)
++...+++++.+|+.... +++++ +|--+.|+||+++.++.+++.=.|+-.. ++|.-+
T Consensus 82 ~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL~f~~~~~p~i~hRGi~~~-----------------lpP~e~ 139 (219)
T 4ano_A 82 TTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENLMFNRALEPFFLHVGVKES-----------------LPPDEW 139 (219)
T ss_dssp SCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGEEECTTCCEEESCCEETTT-----------------BSSCSC
T ss_pred cCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceEEEeCCCcEEEEEcCCccc-----------------CCCCCC
Confidence 677889999999988776 66655 8899999999999999999987776432 233311
Q ss_pred ccCCCCCccchh-hHHHHHHHHHhCCCCcchh
Q 041438 652 YTMKVTEKCDVY-SFGVLALEVIKGKHPRDFL 682 (752)
Q Consensus 652 ~~~~~~~ksDIw-SlGvil~elltg~~pf~~~ 682 (752)
+ ..|.| .+=|++..++.++..|+..
T Consensus 140 -----~-ee~fl~qyKali~all~~K~~Fe~l 165 (219)
T 4ano_A 140 -----D-DERLLREVKATVLALTEGEYRFDEY 165 (219)
T ss_dssp -----C-HHHHHHHHHHHHHHHTTCSSCHHHH
T ss_pred -----C-HHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 1 22343 5677888899999988643
No 449
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=62.81 E-value=16 Score=30.03 Aligned_cols=46 Identities=11% Similarity=0.026 Sum_probs=26.3
Q ss_pred cccccCCccCcCCCCCCeeecCCCcccccCCcccccccccceeeccC
Q 041438 120 ELFDIIPPQISNLSKLEYLDFLTNKLSGHIPSEISLLTHLTILHISR 166 (752)
Q Consensus 120 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 166 (752)
.++.+...+|.++++|+.+.|-.+ ++.+...+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 445555566666666666666543 3445555666666666665544
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=59.34 E-value=5.4 Score=37.98 Aligned_cols=83 Identities=8% Similarity=0.133 Sum_probs=61.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccceeccCCCCCcccccCCCCccCcccc
Q 041438 572 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAKFLNLDSSNWSKLAGTHGNVAPELA 651 (752)
Q Consensus 572 ~l~~~~~~~i~~qi~~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~ 651 (752)
.++...+++++.+|+....+++++ +|--+.|+||+++.++.+++.=.|+...+ +|.
T Consensus 77 ~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~f~~~~~p~i~~RGik~~l-----------------~P~-- 132 (215)
T 4ann_A 77 SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELFFTRDGLPIAKTRGLQNVV-----------------DPL-- 132 (215)
T ss_dssp GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEEECTTSCEEESCCEETTTB-----------------SCC--
T ss_pred hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEEEcCCCCEEEEEccCccCC-----------------CCC--
Confidence 367789999999999988776666 89999999999999999998877764322 222
Q ss_pred ccCCCCCccchh-hHHHHHHHHHhCCCCcchh
Q 041438 652 YTMKVTEKCDVY-SFGVLALEVIKGKHPRDFL 682 (752)
Q Consensus 652 ~~~~~~~ksDIw-SlGvil~elltg~~pf~~~ 682 (752)
..+ ..|.| .+=|++..+++++..|+..
T Consensus 133 ---~~~-ee~fL~qyKAliiall~~K~~Fe~l 160 (215)
T 4ann_A 133 ---PVS-EAEFLTRYKALVICAFNEKQSFDAL 160 (215)
T ss_dssp ---CCC-HHHHHHHHHHHHHHHHCTTCCHHHH
T ss_pred ---CCC-HHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 111 12333 5678888999999998643
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=47.60 E-value=36 Score=27.80 Aligned_cols=47 Identities=17% Similarity=0.082 Sum_probs=26.9
Q ss_pred cccccCCcccccccccceeeccCcccCCCCCcccCCCCCCcEEEccCC
Q 041438 144 KLSGHIPSEISLLTHLTILHISRNQLNGSIPHEVGQLNFLNHLILDSN 191 (752)
Q Consensus 144 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 191 (752)
.++.+...+|.+.++|+.+.|-.+ ++.+-..+|.+..+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 445555566666666666666543 34344555666666666655543
No 452
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=23.53 E-value=1.1e+02 Score=30.98 Aligned_cols=77 Identities=19% Similarity=0.183 Sum_probs=43.3
Q ss_pred ceEEEEEeccCCChHHHhccCccccccCHHHHHHHHHHH--HHHHHHHHhCCCC-Ce-eecCCCCCCEEeCCCCc-eEEe
Q 041438 547 QSFIVYEYLESGSLDKILNNDASAKELGWTQRLNVIKGV--ADALFYLHNNCFP-PI-VHWDISSKNVLLDLGYE-AHVS 621 (752)
Q Consensus 547 ~~~lV~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi--~~aL~~lH~~~~~-~i-vH~DlKp~NIll~~~~~-~kl~ 621 (752)
..+++|||.+|..|.+.-.... ...+..+ .+.++ +-+++.+..+++. +. -+.--.++|||+++++. +.++
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~-~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~I 230 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSA-PEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPI 230 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSH-HHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEEC
T ss_pred cceehhhhcCCCccccchhhhh-hhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEE
Confidence 4669999998765544322110 0112222 23332 3456666665431 22 22235789999986554 8899
Q ss_pred eccccee
Q 041438 622 DFRIAKF 628 (752)
Q Consensus 622 DfG~a~~ 628 (752)
|-+.+..
T Consensus 231 Dhn~af~ 237 (342)
T 1cja_A 231 DSKIIPL 237 (342)
T ss_dssp SCCCCCC
T ss_pred cCCcccc
Confidence 9988864
No 453
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=23.23 E-value=1.4e+02 Score=33.14 Aligned_cols=46 Identities=20% Similarity=0.061 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHH--HHHHHHHhCCCCCeeecCCCCCCEEeCCCCceEEeecccce
Q 041438 575 WTQRLNVIKGVA--DALFYLHNNCFPPIVHWDISSKNVLLDLGYEAHVSDFRIAK 627 (752)
Q Consensus 575 ~~~~~~i~~qi~--~aL~~lH~~~~~~ivH~DlKp~NIll~~~~~~kl~DfG~a~ 627 (752)
++.+..+++.+| +-+.|+=.. +|=.++|||++.+|++.=+|||.+-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 455666666655 345666554 5778999999999999999999874
Done!