BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041441
(310 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23627|SYGM1_ARATH Glycine--tRNA ligase 1, mitochondrial OS=Arabidopsis thaliana
GN=GLYRS-1 PE=2 SV=1
Length = 729
Score = 543 bits (1400), Expect = e-154, Method: Compositional matrix adjust.
Identities = 252/307 (82%), Positives = 278/307 (90%)
Query: 1 HFLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLR 60
HF+L+ENMLEV PCVTPEVVLKASGHV+K TD MVKDEKTGT YRAD LLKD+C EKL
Sbjct: 164 HFILEENMLEVDCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDYCTEKLE 223
Query: 61 EDVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSV 120
+D+ +S E+AAEL+ LA+M+D S E+LGAKI+EYGITAPDTKNPLSDPYPFNLMFQTS+
Sbjct: 224 KDLTISAEKAAELKDVLAVMEDFSPEQLGAKIREYGITAPDTKNPLSDPYPFNLMFQTSI 283
Query: 121 GPSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREF 180
GPSGL Y+RPETA GIFVNFKDLYY NG KLPFAAAQIGQAFRNEISPRQG RVREF
Sbjct: 284 GPSGLIPGYMRPETAQGIFVNFKDLYYYNGKKLPFAAAQIGQAFRNEISPRQGLLRVREF 343
Query: 181 TLAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETI 240
TLAEIEHFVDP++KSHPKFS+V LEFLMFPREEQMS QSAKK+ LGEAV++G VNNET+
Sbjct: 344 TLAEIEHFVDPENKSHPKFSDVAKLEFLMFPREEQMSGQSAKKLCLGEAVAKGTVNNETL 403
Query: 241 GYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSA 300
GYFIGRVYLFL+RLGID++ LRFRQHLANEMAHYAADCWDAEIE SYGWIECVGIADRSA
Sbjct: 404 GYFIGRVYLFLTRLGIDKERLRFRQHLANEMAHYAADCWDAEIESSYGWIECVGIADRSA 463
Query: 301 YDLRAHT 307
YDLRAH+
Sbjct: 464 YDLRAHS 470
>sp|Q9FXG2|SYGC_ARATH Putative glycine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana
GN=At1g29870 PE=2 SV=2
Length = 463
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/308 (65%), Positives = 236/308 (76%), Gaps = 4/308 (1%)
Query: 2 FLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLRE 61
F+ +E+M+EV +TPE V ASGHV+K TD MVKDE G F+RAD L+K +C E ++
Sbjct: 109 FVDEEDMMEVACTALTPEAVFNASGHVKKFTDLMVKDEVDGAFHRADHLVKSYC-ENRKK 167
Query: 62 DVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDP-YPFNLMFQTSV 120
D +S E AAEL + +A ++DLS EELG + + TAP TKNPLS P PFNLMFQTS
Sbjct: 168 DPTISAENAAELDKVIAHVEDLSAEELGG-VWNHCSTAPVTKNPLSHPPRPFNLMFQTSF 226
Query: 121 GPSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREF 180
G SG Y+RPETA G F NFKD Y NG KLPFA AQ+G+ FRNEISPRQG R REF
Sbjct: 227 GASGSLIGYLRPETAQGSFCNFKDYYNLNGRKLPFAVAQVGRVFRNEISPRQGLLRTREF 286
Query: 181 TLAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQ-MSAQSAKKIRLGEAVSRGIVNNET 239
TLAEIEHFV P+ KSH KFS+V LE LMFPREEQ Q AK++ LGEAV++G VN+ET
Sbjct: 287 TLAEIEHFVHPEHKSHSKFSDVAKLELLMFPREEQEKPGQFAKRLCLGEAVAKGHVNSET 346
Query: 240 IGYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRS 299
+G+FIGRVYLFL RLGID++ LRFR HLANEMAHYA DCWDAEIECSYGWIECVGIADRS
Sbjct: 347 LGFFIGRVYLFLIRLGIDKERLRFRHHLANEMAHYATDCWDAEIECSYGWIECVGIADRS 406
Query: 300 AYDLRAHT 307
YDLRAH+
Sbjct: 407 DYDLRAHS 414
>sp|Q9CZD3|SYG_MOUSE Glycine--tRNA ligase OS=Mus musculus GN=Gars PE=1 SV=1
Length = 729
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 216/306 (70%), Gaps = 1/306 (0%)
Query: 1 HFLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLR 60
HF+ +E +LE+ +TPE VLK SGHV+K D MVKD K G +RAD LLK +KL
Sbjct: 158 HFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHL-QKLM 216
Query: 61 EDVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSV 120
D + S E+ +E+ LA +D+ +EL Y + +P T N LS P PFNLMFQT +
Sbjct: 217 SDKKCSAEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPTTGNDLSPPVPFNLMFQTFI 276
Query: 121 GPSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREF 180
GP G Y+RPETA GIF+NFK L N KLPFAAAQIG +FRNEISPR G RVREF
Sbjct: 277 GPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREF 336
Query: 181 TLAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETI 240
T+AEIEHFVDP +K HPKF V +L ++ + Q++ QSA+K+RLG+AV +G++NN +
Sbjct: 337 TMAEIEHFVDPTEKDHPKFQSVADLCLYLYSAKAQVTGQSARKMRLGDAVEQGVINNSVL 396
Query: 241 GYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSA 300
GYFIGR+YL+L+++GI D LRFRQH+ NEMAHYA DCWDAE + SYGWIE VG ADRS
Sbjct: 397 GYFIGRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSC 456
Query: 301 YDLRAH 306
YDL H
Sbjct: 457 YDLSCH 462
>sp|Q5I0G4|SYG_RAT Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus GN=Gars PE=1
SV=1
Length = 637
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 216/306 (70%), Gaps = 1/306 (0%)
Query: 1 HFLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLR 60
HF+ +E +LE+ +TPE VLK SGHV+K D MVKD K G +RAD LLK +KL
Sbjct: 66 HFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHL-QKLM 124
Query: 61 EDVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSV 120
D + S E+ +E+ LA +D+ +EL Y + +P T N LS P PFNLMFQT +
Sbjct: 125 SDKKCSAEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPTTGNDLSPPVPFNLMFQTFI 184
Query: 121 GPSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREF 180
GP G Y+RPETA GIF+NFK L N KLPFAAAQIG +FRNEISPR G RVREF
Sbjct: 185 GPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREF 244
Query: 181 TLAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETI 240
T+AEIEHFVDP +K HPKF V +L ++ + Q++ QSA+K+RLG+AV +G++NN +
Sbjct: 245 TMAEIEHFVDPTEKDHPKFPSVADLYLYLYSAKAQVTGQSARKMRLGDAVEQGVINNSVL 304
Query: 241 GYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSA 300
GYFIGR+YL+L+++GI D LRFRQH+ NEMAHYA DCWDAE + SYGWIE VG ADRS
Sbjct: 305 GYFIGRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSC 364
Query: 301 YDLRAH 306
YDL H
Sbjct: 365 YDLSCH 370
>sp|P41250|SYG_HUMAN Glycine--tRNA ligase OS=Homo sapiens GN=GARS PE=1 SV=3
Length = 739
Score = 362 bits (930), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 216/306 (70%), Gaps = 1/306 (0%)
Query: 1 HFLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLR 60
HF+ +E +LE+ +TPE VLK SGHV+K D MVKD K G +RAD LLK +KL
Sbjct: 168 HFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHL-QKLM 226
Query: 61 EDVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSV 120
D + S+E+ +E+ LA +D+ +EL Y + +P T N LS P FNLMF+T +
Sbjct: 227 SDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTFI 286
Query: 121 GPSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREF 180
GP G Y+RPETA GIF+NFK L N KLPFAAAQIG +FRNEISPR G RVREF
Sbjct: 287 GPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREF 346
Query: 181 TLAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETI 240
T+AEIEHFVDP +K HPKF V +L ++ + Q+S QSA+K+RLG+AV +G++NN +
Sbjct: 347 TMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVL 406
Query: 241 GYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSA 300
GYFIGR+YL+L+++GI D LRFRQH+ NEMAHYA DCWDAE + SYGWIE VG ADRS
Sbjct: 407 GYFIGRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSC 466
Query: 301 YDLRAH 306
YDL H
Sbjct: 467 YDLSCH 472
>sp|Q5RBL1|SYG_PONAB Glycine--tRNA ligase OS=Pongo abelii GN=GARS PE=2 SV=1
Length = 739
Score = 362 bits (929), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 216/306 (70%), Gaps = 1/306 (0%)
Query: 1 HFLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLR 60
HF+ +E +LE+ +TPE VLK SGHV+K D MVKD K G +RAD LLK +KL
Sbjct: 168 HFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHL-QKLM 226
Query: 61 EDVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSV 120
D + S+E+ +E+ LA +D+ +EL Y + +P T N LS P FNLMF+T +
Sbjct: 227 SDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTFI 286
Query: 121 GPSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREF 180
GP G Y+RPETA GIF+NFK L N KLPFAAAQIG +FRNEISPR G RVREF
Sbjct: 287 GPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREF 346
Query: 181 TLAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETI 240
T+AEIEHFVDP +K HPKF V +L ++ + Q+S QSA+K+RLG+AV +G++NN +
Sbjct: 347 TMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVL 406
Query: 241 GYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSA 300
GYFIGR+YL+L+++GI D LRFRQH+ NEMAHYA DCWDAE + SYGWIE VG ADRS
Sbjct: 407 GYFIGRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSC 466
Query: 301 YDLRAH 306
YDL H
Sbjct: 467 YDLSCH 472
>sp|Q04451|SYG_BOMMO Glycine--tRNA ligase OS=Bombyx mori PE=1 SV=2
Length = 680
Score = 345 bits (886), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 166/306 (54%), Positives = 211/306 (68%), Gaps = 3/306 (0%)
Query: 2 FLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLRE 61
F+L+E MLEV +TPE VLKASGHVE+ D M KD KTG +R D L+K EK++
Sbjct: 115 FILQEQMLEVECSILTPEPVLKASGHVERFADLMTKDIKTGECFRLDHLIKGHL-EKIKS 173
Query: 62 DVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSVG 121
D +E AE+ L +D ++ +E+ A +K + + +P + N L+ P FNLMF T +G
Sbjct: 174 DKNTKIELKAEIEDILIKLDGMNADEMSALMKRFEMKSPISGNDLTPPIEFNLMFNTQIG 233
Query: 122 PSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFT 181
PSGL ++RPETA GIFVNFK L N +LPFAAAQIG +FRNEISPR G RVREFT
Sbjct: 234 PSGLVKGFLRPETAQGIFVNFKRLLEFNQGRLPFAAAQIGNSFRNEISPRSGLLRVREFT 293
Query: 182 LAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIG 241
+ EIEHF D K+ HPKF VKN + L++ + Q + A +G+AV +GIVNNET+G
Sbjct: 294 MCEIEHFCDVKE--HPKFESVKNTQSLLYSADNQEQGKPADLTTIGDAVCKGIVNNETLG 351
Query: 242 YFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAY 301
YF+ R+++++ +GID LRFRQH+ NEMAHYA DCWDAE SYGWIECVG ADRSAY
Sbjct: 352 YFMARIHMYMLAVGIDPKRLRFRQHMGNEMAHYACDCWDAECLSSYGWIECVGCADRSAY 411
Query: 302 DLRAHT 307
DL HT
Sbjct: 412 DLTQHT 417
>sp|P38088|SYG_YEAST Glycine--tRNA ligase 1, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GRS1 PE=1 SV=3
Length = 690
Score = 336 bits (861), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 166/340 (48%), Positives = 219/340 (64%), Gaps = 33/340 (9%)
Query: 1 HFLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLR 60
HF+L+E+MLEV +TP VLK SGHV+K +D M +D KTG +RAD L+++ +L+
Sbjct: 87 HFILEEDMLEVDCTMLTPYEVLKTSGHVDKFSDWMCRDLKTGEIFRADHLVEEVLEARLK 146
Query: 61 ED--------------------------------VRLSLEQAAELRRTLAMMDDLSVEEL 88
D V+L + E LA +D S EL
Sbjct: 147 GDQEARGLVEDANAAAKDDAEKKKRKKKVKQIKAVKLDDDVVKEYEEILAKIDGYSGPEL 206
Query: 89 GAKIKEYGITAPDTKNPLSDPYPFNLMFQTSVGPSGLTAAYVRPETAPGIFVNFKDLYYN 148
G +++Y I P T L P FNLMF+T++GPSG Y+RPETA G F+NF L
Sbjct: 207 GELMEKYDIGNPVTGETLESPRAFNLMFETAIGPSGQLKGYLRPETAQGQFLNFNKLLEF 266
Query: 149 NGNKLPFAAAQIGQAFRNEISPRQGFSRVREFTLAEIEHFVDPKDKSHPKFSEVKNLEFL 208
N +K PFA+A IG++FRNEISPR G RVREF +AEIEHFVDP DKSHPKF+E+K+++
Sbjct: 267 NNSKTPFASASIGKSFRNEISPRAGLLRVREFLMAEIEHFVDPLDKSHPKFNEIKDIKLS 326
Query: 209 MFPREEQMSAQSAKKIR-LGEAVSRGIVNNETIGYFIGRVYLFLSRLGIDQDHLRFRQHL 267
PR+ Q + + ++ +GEAV+ +V+NET+GYFI R+Y FL ++G+D+ LRFRQH+
Sbjct: 327 FLPRDVQEAGSTEPIVKTVGEAVASRMVDNETLGYFIARIYQFLMKIGVDESKLRFRQHM 386
Query: 268 ANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAHT 307
ANEMAHYAADCWD E++ SYGWIECVG ADRSAYDL H+
Sbjct: 387 ANEMAHYAADCWDGELKTSYGWIECVGCADRSAYDLTVHS 426
>sp|Q10039|SYG_CAEEL Glycine--tRNA ligase OS=Caenorhabditis elegans GN=grs-1 PE=2 SV=2
Length = 742
Score = 334 bits (856), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 164/306 (53%), Positives = 212/306 (69%), Gaps = 1/306 (0%)
Query: 1 HFLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLR 60
HF+L+E MLEV +TPE VLKASGHV++ D MVKD K G +RAD L+K+ EKL
Sbjct: 178 HFILEEGMLEVDCTSLTPEPVLKASGHVDRFADWMVKDMKNGECFRADHLIKNSI-EKLL 236
Query: 61 EDVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSV 120
D + S + + LA ++ +++ I + +P T N L++P FNLMF T +
Sbjct: 237 NDKKTSAAVKQDGQDVLARLEGFDNKDMHEVITRFNFKSPITGNDLTEPIAFNLMFPTQI 296
Query: 121 GPSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREF 180
GP+G A++RPETA GIFVNFK L N KLPFAAAQIG FRNEISPRQG RVREF
Sbjct: 297 GPTGDFKAFLRPETAQGIFVNFKRLLEFNQGKLPFAAAQIGLGFRNEISPRQGLIRVREF 356
Query: 181 TLAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETI 240
T+ EIEHFVDP+DKS KF++V + + ++F Q+ A+++ +GEAV++ V NET+
Sbjct: 357 TMCEIEHFVDPEDKSLAKFAKVADQKLVLFSACNQLDGAPAQEVAIGEAVAKKTVANETL 416
Query: 241 GYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSA 300
GY++ R + FL ++GID LRFRQHL+NEMAHYA DCWDAEI SYGWIECVG ADR+
Sbjct: 417 GYYMARCHQFLMKVGIDGRRLRFRQHLSNEMAHYAQDCWDAEILTSYGWIECVGNADRAC 476
Query: 301 YDLRAH 306
YDL+ H
Sbjct: 477 YDLQQH 482
>sp|Q10179|SYG_SCHPO Putative glycine--tRNA ligase OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=grs1 PE=3 SV=1
Length = 652
Score = 330 bits (845), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 160/338 (47%), Positives = 214/338 (63%), Gaps = 31/338 (9%)
Query: 1 HFLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLR 60
HF+++E+MLEV +TP VLK SGHV+K D M KD TG +RAD L+++ +L+
Sbjct: 59 HFVIEESMLEVDCSMLTPHEVLKTSGHVDKFADWMCKDPATGEIFRADHLVEEVLEARLK 118
Query: 61 ED------------------------------VRLSLEQAAELRRTLAMMDDLSVEELGA 90
D RL + E LA +D+ ++LG
Sbjct: 119 GDKEARGQNSNDQPEESDDKKKRKKKVKEIRATRLDDKTVEEYEFILAQIDNYDGDQLGE 178
Query: 91 KIKEYGITAPDTKNPLSDPYPFNLMFQTSVGPSGLTAAYVRPETAPGIFVNFKDLYYNNG 150
+K+Y I P T L P FNLMF+T +GPSG Y+RPETA G F+NF L N
Sbjct: 179 LMKKYDIRNPATNGELETPRQFNLMFETQIGPSGGLKGYLRPETAQGQFLNFSRLLEFNN 238
Query: 151 NKLPFAAAQIGQAFRNEISPRQGFSRVREFTLAEIEHFVDPKDKSHPKFSEVKNLEFLMF 210
K+PFA+A +G+AFRNEISPR G RVREF +AE+EHFVDPK+K H +F EV ++ +
Sbjct: 239 GKVPFASAMVGKAFRNEISPRSGLLRVREFLMAEVEHFVDPKNKEHDRFDEVSHMPLRLL 298
Query: 211 PREEQMSAQS-AKKIRLGEAVSRGIVNNETIGYFIGRVYLFLSRLGIDQDHLRFRQHLAN 269
PR Q+ ++ ++ +G+AV +GIV+N T+GYF+ R+ LFL ++GID + +RFRQH++N
Sbjct: 299 PRGVQLEGKTDILEMPIGDAVKKGIVDNTTLGYFMARISLFLEKIGIDMNRVRFRQHMSN 358
Query: 270 EMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAHT 307
EMAHYA DCWDAEI+CSYGWIECVG ADRSAYDL H+
Sbjct: 359 EMAHYACDCWDAEIQCSYGWIECVGCADRSAYDLSVHS 396
>sp|Q06817|SYG2_YEAST Glycine--tRNA ligase 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GRS2 PE=1 SV=1
Length = 618
Score = 327 bits (837), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 161/309 (52%), Positives = 209/309 (67%), Gaps = 3/309 (0%)
Query: 1 HFLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLR 60
HF+++ENML+V P +TP VLK SGHV+K TD M ++ KTG +YRAD L++ ++L
Sbjct: 56 HFIMEENMLQVDGPMLTPYDVLKTSGHVDKFTDWMCRNPKTGEYYRADHLIEQTLKKRLL 115
Query: 61 EDVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSV 120
D ++ + + + L +D S EL ++EY I P T + L FNLMF+T +
Sbjct: 116 -DKDVNPQDMKNMEKILTTIDGFSGPELNLVMQEYNINDPVTNDVLDALTSFNLMFETKI 174
Query: 121 GPSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREF 180
G SG A++RPETA G F+NF L N K+PFA+A IG++FRNEISPR G RVREF
Sbjct: 175 GASGQLKAFLRPETAQGQFLNFNKLLEINQGKIPFASASIGKSFRNEISPRSGLLRVREF 234
Query: 181 TLAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSA--QSAKKIRLGEAVSRGIVNNE 238
+AEIEHFVDP +KSH KF+EV N E + R Q S Q K+ +GEAV+ G+V NE
Sbjct: 235 LMAEIEHFVDPLNKSHAKFNEVLNEEIPLLSRRLQESGEVQLPVKMTIGEAVNSGMVENE 294
Query: 239 TIGYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADR 298
T+GYF+ RV+ FL +GI++D RFRQHL NEMAHYA DCWD EI SYGWIECVG ADR
Sbjct: 295 TLGYFMARVHQFLLNIGINKDKFRFRQHLKNEMAHYATDCWDGEILTSYGWIECVGCADR 354
Query: 299 SAYDLRAHT 307
+A+DL H+
Sbjct: 355 AAFDLTVHS 363
>sp|Q8SQZ6|SYG_ENCCU Glycine--tRNA ligase OS=Encephalitozoon cuniculi (strain GB-M1)
GN=ECU10_1790 PE=1 SV=1
Length = 579
Score = 295 bits (755), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 153/306 (50%), Positives = 198/306 (64%), Gaps = 16/306 (5%)
Query: 1 HFLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLR 60
HF+L+E+MLE+ + + P VLKASGHV+K D +V DE +G +RAD L+ D +
Sbjct: 53 HFVLEEDMLEIETTTMLPHDVLKASGHVDKFCDILVFDEVSGDCFRADHLVGDALEK--- 109
Query: 61 EDVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSV 120
+ E+ + L +D +S +E+ I +Y I + N LS FNLMF T +
Sbjct: 110 ------MSPTEEISKELQKVDCMSCQEIDEIISKYNIRST-LGNKLSKSQQFNLMFGTQI 162
Query: 121 GPSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREF 180
G G ++RPETA G F+NFK L N +KLPFA+A IG+A+RNEISPR G RVREF
Sbjct: 163 GYKGGQTMFLRPETAQGQFLNFKKLCEYNNDKLPFASASIGKAYRNEISPRSGLLRVREF 222
Query: 181 TLAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETI 240
AEIEHFV +K HPKFS V+ ++ + M ++++I L EA+ RGIV NET+
Sbjct: 223 DQAEIEHFVLTDEKDHPKFSTVQGIKLKL------MHHDASEEITLKEAIERGIVCNETM 276
Query: 241 GYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSA 300
GY+IGR LFL LGID++ LRFRQH +EMAHYA CWDAEI SYGWIECVGIADR+
Sbjct: 277 GYYIGRTALFLIELGIDRELLRFRQHKKDEMAHYAKGCWDAEIYTSYGWIECVGIADRAC 336
Query: 301 YDLRAH 306
YDL H
Sbjct: 337 YDLSCH 342
>sp|Q57681|SYG_METJA Glycine--tRNA ligase OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=glyS PE=3 SV=1
Length = 577
Score = 282 bits (721), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 149/313 (47%), Positives = 194/313 (61%), Gaps = 27/313 (8%)
Query: 1 HFLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLR 60
+++KE E+ SP VTP VLKASGHV+ TD +V+ + +RAD L+++F
Sbjct: 53 QYIIKEGFYEIESPTVTPYEVLKASGHVDNFTDPIVECKNCLESFRADHLIEEF------ 106
Query: 61 EDVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSV 120
V + E +TL +D+L I+++ I P L + FNLMF TS+
Sbjct: 107 --VDVDTEG-----KTLKELDEL--------IRKHNIRCPKCGGELGEVKKFNLMFVTSI 151
Query: 121 GPSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREF 180
GP G Y+RPETA GIF+ F+ L NKLPF QIG+++RNEISPRQG R+REF
Sbjct: 152 GPGGKRTGYMRPETAQGIFIQFRRLAQFFRNKLPFGVVQIGKSYRNEISPRQGVIRLREF 211
Query: 181 TLAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSA-----QSAKKIRLGEAVSRGIV 235
T AEIE+FV P+ K H KF VK+ + P E QM + KI +GEAV +GI+
Sbjct: 212 TQAEIEYFVHPERKEHEKFDLVKDEVVPLLPAERQMDENLSDDEKVIKISIGEAVEKGII 271
Query: 236 NNETIGYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECS-YGWIECVG 294
++TI YFI FL +GID+D +RFRQHL NEMAHYA DCWDAEI +GWIECVG
Sbjct: 272 RHQTIAYFIALTKRFLEAIGIDKDKIRFRQHLPNEMAHYAIDCWDAEIYTERFGWIECVG 331
Query: 295 IADRSAYDLRAHT 307
IADR+ YDLR+H+
Sbjct: 332 IADRTDYDLRSHS 344
>sp|A0B5U4|SYG_METTP Glycine--tRNA ligase OS=Methanosaeta thermophila (strain DSM 6194 /
PT) GN=glyS PE=3 SV=1
Length = 577
Score = 279 bits (713), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/310 (44%), Positives = 195/310 (62%), Gaps = 24/310 (7%)
Query: 2 FLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLRE 61
F++ E E+ P + E V +ASGH+ +D + + ++ YRAD L+K
Sbjct: 52 FVIGEGFAEIECPTIGIEEVFRASGHLSGFSDPLTECKECKEIYRADHLIKHI------- 104
Query: 62 DVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSVG 121
+ + D LS EE+ IKE IT P+ LS+ Y FNLMF+T++G
Sbjct: 105 ---------------VEVPDALSAEEIYRMIKENDITCPECGGELSEVYEFNLMFRTAIG 149
Query: 122 PSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFT 181
P Y+RPETA G+F+NF+ L + LPF A QIG+++RNEISPRQG R+REF+
Sbjct: 150 PGNRHPGYLRPETAQGMFINFQRLLRYYRDSLPFGAVQIGRSYRNEISPRQGVIRLREFS 209
Query: 182 LAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIG 241
AE E F+DP++K HP+FSEVK+L ++ RE Q Q +++ +GEAV RGI+ +E +
Sbjct: 210 QAEAEVFIDPRNKQHPRFSEVKDLRLRLYSREAQERGQ-VEEMSVGEAVERGIIAHEILA 268
Query: 242 YFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECS-YGWIECVGIADRSA 300
YF+ R Y +L +G+D++ LRFRQH A+EMAHYAADCWDAE+ GWIE VGIADR+
Sbjct: 269 YFVARTYEYLLAVGVDRERLRFRQHKADEMAHYAADCWDAEVLLDRLGWIEIVGIADRTD 328
Query: 301 YDLRAHTVIN 310
YDLR+H ++
Sbjct: 329 YDLRSHMALS 338
>sp|A6URK3|SYG_METVS Glycine--tRNA ligase OS=Methanococcus vannielii (strain SB / ATCC
35089 / DSM 1224) GN=glyS PE=3 SV=1
Length = 574
Score = 260 bits (665), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 144/313 (46%), Positives = 187/313 (59%), Gaps = 28/313 (8%)
Query: 1 HFLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLR 60
H+++ E E+ SP V P VLKASGHVE TD +V+ + +RAD +++
Sbjct: 51 HYIINEGFYEIDSPTVNPYEVLKASGHVENFTDPLVECKSCLESFRADHIIE-------- 102
Query: 61 EDVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSV 120
E++ + E ++ EL I++ I P + FNLMF TS+
Sbjct: 103 ENIEVDTEGK-------------TLNELQEMIEKNNIKCPKCGGEFKEVNTFNLMFATSI 149
Query: 121 GPSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREF 180
GP G AA++RPETA GIF+ FK + NKLP+ A QIG+A+RNEISPRQG R+REF
Sbjct: 150 GPGGKRAAFMRPETAQGIFIQFKRISQFFRNKLPYGAVQIGKAYRNEISPRQGVIRLREF 209
Query: 181 TLAEIEHFVDPKDKSH-PKFSEVKNLEFLMFP--REEQMSAQSAKKI---RLGEAVSRGI 234
T AE E F+D + K + KF VK+L + P +E S S +KI LG+AV I
Sbjct: 210 TQAEAEFFIDSRKKENFEKFESVKDLILPLLPGKNQENESLSSEEKIVRMSLGDAVKNKI 269
Query: 235 VNNETIGYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECS-YGWIECV 293
+ +E I Y+I FL +GID+ LRFRQHL NEMAHYAADCWDAE+ YGWIECV
Sbjct: 270 IAHEAIAYYIAVTKKFLMDIGIDETKLRFRQHLPNEMAHYAADCWDAELYTDRYGWIECV 329
Query: 294 GIADRSAYDLRAH 306
GIADR+ YDLRAH
Sbjct: 330 GIADRTDYDLRAH 342
>sp|A9A885|SYG_METM6 Glycine--tRNA ligase OS=Methanococcus maripaludis (strain C6 / ATCC
BAA-1332) GN=glyS PE=3 SV=1
Length = 574
Score = 259 bits (663), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/313 (46%), Positives = 187/313 (59%), Gaps = 28/313 (8%)
Query: 1 HFLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLR 60
H+++ E E+ SP VTP VLKASGHVE TD +V+ + +RAD +++
Sbjct: 51 HYIVNEGFYEIDSPTVTPYEVLKASGHVENFTDPLVECKGCLESFRADHIIE-------- 102
Query: 61 EDVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSV 120
E+V + E +++EL I++ I P D FNLMF TS+
Sbjct: 103 ENVDVDTEGK-------------TLQELQEMIEKNNIKCPKCGGEFKDVSTFNLMFATSI 149
Query: 121 GPSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREF 180
GP G AA++RPETA GIF+ FK + NKLPF A QIG+A+RNEISPRQG R+REF
Sbjct: 150 GPGGKRAAFMRPETAQGIFIQFKRISQFFRNKLPFGAVQIGKAYRNEISPRQGVIRLREF 209
Query: 181 TLAEIEHFVDPKDKSH-PKFSEVKN--LEFLMFPREEQMSAQSAKKI---RLGEAVSRGI 234
T AE E F+D + K + KF VK+ L L +E S + +KI L +AV GI
Sbjct: 210 TQAEGEFFIDSRKKENFEKFESVKDTVLPLLSGKNQENESLSAEEKIVRMSLSDAVKNGI 269
Query: 235 VNNETIGYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECS-YGWIECV 293
+ +E I Y+I FL +GID+ LRFRQHL NEMAHYAADCWDAE+ YGWIECV
Sbjct: 270 IAHEAIAYYIAVTKKFLMEIGIDESKLRFRQHLPNEMAHYAADCWDAELYTDRYGWIECV 329
Query: 294 GIADRSAYDLRAH 306
GIADR+ YDL AH
Sbjct: 330 GIADRTNYDLLAH 342
>sp|A6VIK1|SYG_METM7 Glycine--tRNA ligase OS=Methanococcus maripaludis (strain C7 / ATCC
BAA-1331) GN=glyS PE=3 SV=1
Length = 574
Score = 259 bits (662), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 189/313 (60%), Gaps = 28/313 (8%)
Query: 1 HFLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLR 60
H+++ E E+ SP VTP VLKASGHVE TD +V+ ++ +RAD +++
Sbjct: 51 HYIVNEGFYEIDSPTVTPYEVLKASGHVENFTDPLVECKECLESFRADHIIE-------- 102
Query: 61 EDVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSV 120
E+V + E +++EL I++ I P + FNLMF TS+
Sbjct: 103 ENVDVDTEGK-------------TLQELQEMIEKNNIKCPKCGGEFKEVSTFNLMFATSI 149
Query: 121 GPSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREF 180
GP G AA++RPETA GIF+ FK + NKLPF A QIG+A+RNEISPRQG R+REF
Sbjct: 150 GPGGKRAAFMRPETAQGIFIQFKRISQFFRNKLPFGAVQIGKAYRNEISPRQGVIRLREF 209
Query: 181 TLAEIEHFVDPKDKSH-PKFSEVKNLEFLMFP--REEQMSAQSAKKI---RLGEAVSRGI 234
T AE E F+D + K + KF VK++ + P +E S + +KI L +AV G+
Sbjct: 210 TQAEGEFFIDSRKKENFEKFESVKDMVLPLLPGKNQENESLSAEEKIVRMSLSDAVKNGV 269
Query: 235 VNNETIGYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECS-YGWIECV 293
+ +E I Y++ FL +GID+ LRFRQHL NEMAHYAADCWDAE+ YGWIECV
Sbjct: 270 IAHEAIAYYVAVTKKFLMEIGIDESKLRFRQHLPNEMAHYAADCWDAELYTDRYGWIECV 329
Query: 294 GIADRSAYDLRAH 306
GIADR+ YDL AH
Sbjct: 330 GIADRTNYDLLAH 342
>sp|Q6M0Q7|SYG_METMP Glycine--tRNA ligase OS=Methanococcus maripaludis (strain S2 / LL)
GN=glyS PE=3 SV=1
Length = 574
Score = 258 bits (658), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 186/313 (59%), Gaps = 28/313 (8%)
Query: 1 HFLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLR 60
H+++ E E+ SP VTP VLKASGHVE TD +V+ + +RAD +++
Sbjct: 51 HYIVNEGFYEIDSPTVTPYEVLKASGHVENFTDPLVECKDCLESFRADHIIE-------- 102
Query: 61 EDVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSV 120
E+V + E +++EL I++ I P + FNLMF TS+
Sbjct: 103 ENVDVDTEGK-------------TLQELQEMIEKNNIRCPKCGGEFKEVSTFNLMFATSI 149
Query: 121 GPSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREF 180
GP G AA++RPETA GIF+ FK + NKLPF A QIG+A+RNEISPRQG R+REF
Sbjct: 150 GPGGKRAAFMRPETAQGIFIQFKRISQFFRNKLPFGAVQIGKAYRNEISPRQGVIRLREF 209
Query: 181 TLAEIEHFVDPKDKSH-PKFSEVKNLEFLMFPREEQ-----MSAQSAKKIRLGEAVSRGI 234
T AE E F+D + K + KF VK++ + + Q S + K+ L +AV GI
Sbjct: 210 TQAEGEFFIDSRKKENFEKFESVKDMVLPLLSGKNQEDESLSSEEKVVKMSLSDAVKNGI 269
Query: 235 VNNETIGYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECS-YGWIECV 293
+ +E I Y+I FL +GID+ LRFRQHL NEMAHYAADCWDAE+ YGWIECV
Sbjct: 270 IAHEAIAYYIAVTKKFLMEIGIDETKLRFRQHLPNEMAHYAADCWDAELYTDRYGWIECV 329
Query: 294 GIADRSAYDLRAH 306
G+ADR+ YDL AH
Sbjct: 330 GVADRTNYDLLAH 342
>sp|A4FZX1|SYG_METM5 Glycine--tRNA ligase OS=Methanococcus maripaludis (strain C5 / ATCC
BAA-1333) GN=glyS PE=3 SV=1
Length = 575
Score = 257 bits (656), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 28/313 (8%)
Query: 1 HFLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLR 60
H+++ E E+ SP VTP VLKASGHVE TD +V+ + +RAD +++
Sbjct: 51 HYIVNEGFYEIDSPTVTPYEVLKASGHVENFTDPLVECKSCLESFRADHIIE-------- 102
Query: 61 EDVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSV 120
E+V + E +++EL I++ I P + FNLMF TS+
Sbjct: 103 ENVDVDTEGK-------------TLQELQEMIEKNNIKCPKCGGEFKEVSTFNLMFATSI 149
Query: 121 GPSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREF 180
GP G AA++RPETA GIF+ FK + NKLPF A QIG+A+RNEISPRQG R+REF
Sbjct: 150 GPGGKRAAFMRPETAQGIFIQFKRISQFFRNKLPFGAVQIGKAYRNEISPRQGVIRLREF 209
Query: 181 TLAEIEHFVDPKDKSH-PKFSEVKN--LEFLMFPREEQMSAQSAKKI---RLGEAVSRGI 234
T AE E F+D + K + KF VK L L +E S + +KI L +AV GI
Sbjct: 210 TQAEGEFFIDSRKKENFEKFESVKEIVLPLLSGKNQENESLSAEEKIVRMSLSDAVKNGI 269
Query: 235 VNNETIGYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECS-YGWIECV 293
+ +E I Y+I FL +GID+ LRFRQHL NEMAHYAADCWDAE+ YGWIECV
Sbjct: 270 IAHEAIAYYIAVTKKFLMEIGIDESKLRFRQHLPNEMAHYAADCWDAELYTDRYGWIECV 329
Query: 294 GIADRSAYDLRAH 306
GIADR+ YDL AH
Sbjct: 330 GIADRTNYDLLAH 342
>sp|O59235|SYG_PYRHO Glycine--tRNA ligase OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=glyS PE=3
SV=1
Length = 570
Score = 253 bits (647), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 133/305 (43%), Positives = 183/305 (60%), Gaps = 22/305 (7%)
Query: 3 LLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLRED 62
++E E+ +P +TPE V ASGHVEK D +V+ +K G +RAD L+++F
Sbjct: 56 FIREGFFEIETPDITPEQVFIASGHVEKFVDPVVECKKCGMRFRADHLIEEF-------- 107
Query: 63 VRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSVGP 122
L ++ ++ S EE+ I+E+G+ P+ LSD + FNLMF+T +GP
Sbjct: 108 --LGID-----------VEGKSAEEMSRIIREHGLKCPECGGELSDVFYFNLMFETYIGP 154
Query: 123 SGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFTL 182
AY+RPETA GIFVNFK L NKLPF QIG+A+RNEISPRQG R+REFT
Sbjct: 155 YKDKKAYLRPETAQGIFVNFKRLNAFARNKLPFGVFQIGKAYRNEISPRQGMIRLREFTQ 214
Query: 183 AEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIGY 242
AE E F +P + HP F+EVK+ + ++P E Q+ ++ EAV RG V N Y
Sbjct: 215 AEAEIFFNPNETEHPHFNEVKHEKLKLYPIENQLKELGEVEVTAEEAVKRGYVMNSFFAY 274
Query: 243 FIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECS-YGWIECVGIADRSAY 301
++ + L +GI +D +RFRQ L E AHY+AD WDAE+ +GW+ECVG+A R+ Y
Sbjct: 275 YMVMIKKILLDIGIPEDKIRFRQQLPEERAHYSADTWDAEVYSERFGWVECVGLAYRTDY 334
Query: 302 DLRAH 306
DL H
Sbjct: 335 DLSRH 339
>sp|C5A1H0|SYG_THEGJ Glycine--tRNA ligase OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=glyS PE=3 SV=1
Length = 570
Score = 253 bits (645), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/303 (44%), Positives = 177/303 (58%), Gaps = 22/303 (7%)
Query: 5 KENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLREDVR 64
+E E+ +P +TPE V ASGHVEK D +V+ K G +RAD +++ E L DV
Sbjct: 58 REGFFELETPDITPEKVFIASGHVEKFVDPLVECRKCGARFRADHIIE----EALGMDV- 112
Query: 65 LSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSVGPSG 124
+ LS EEL I+E+ I P+ LSD + FNLMF+T +GP G
Sbjct: 113 ----------------EGLSAEELTKLIREHDIRCPECGGELSDVWYFNLMFETKIGPYG 156
Query: 125 LTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFTLAE 184
Y+RPETA GIFVNFK L NKLPF QIG+A+RNEISPRQG R+REFT AE
Sbjct: 157 DQKGYLRPETAQGIFVNFKRLNAFARNKLPFGVFQIGKAYRNEISPRQGMLRLREFTQAE 216
Query: 185 IEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIGYFI 244
E F +P + HP F EVKN + ++P E Q+ ++ EAV +G + N Y++
Sbjct: 217 AEIFFNPSETEHPHFDEVKNEKLRLYPIEHQLKNLGEIELTAEEAVKKGYIMNTFFAYYM 276
Query: 245 GRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECS-YGWIECVGIADRSAYDL 303
V L +GI +D +RFRQ L E AHY+ D WDAE+ +GW+ECVGIA+R YDL
Sbjct: 277 VMVKRVLLDIGIPEDKIRFRQQLPEERAHYSRDTWDAEVHSERFGWVECVGIANRGDYDL 336
Query: 304 RAH 306
H
Sbjct: 337 SRH 339
>sp|O27874|SYG_METTH Glycine--tRNA ligase OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=glyS PE=3 SV=1
Length = 565
Score = 251 bits (642), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 129/307 (42%), Positives = 177/307 (57%), Gaps = 22/307 (7%)
Query: 2 FLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLRE 61
++++E E+ SP + PE LKASGHV+ D M + ++ YRAD +++D +
Sbjct: 54 YVVREGFYEIESPTIMPEEALKASGHVDHFNDPMTQCKECMDVYRADHIIEDATGRDV-- 111
Query: 62 DVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSVG 121
+ L +EL I + GI P L+ + +NLMFQT +G
Sbjct: 112 -------------------EGLENQELTEIISDEGIRCPRCGGHLTHVWSYNLMFQTLIG 152
Query: 122 PSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFT 181
G Y+RPETA GIF+ FK L N+LPF Q+G+++RNEISPRQG R+REFT
Sbjct: 153 ARGKKTGYLRPETAQGIFIPFKRLLRFFRNRLPFGVVQLGKSYRNEISPRQGVIRLREFT 212
Query: 182 LAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIG 241
AE E FVDP+ K+HP F EVK ++P QM + EA+ G++++E +
Sbjct: 213 QAEAEIFVDPEHKTHPDFEEVKEDILRLYPAGRQMEESGTVDMTAAEALEAGVISSEVLT 272
Query: 242 YFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAE-IECSYGWIECVGIADRSA 300
Y + FL +GI +D LRFRQHL +EMAHYA DCWD E SYGWIE +GIADR+
Sbjct: 273 YHLCLAKRFLMDIGIPEDALRFRQHLPSEMAHYAIDCWDVEAFTDSYGWIEIIGIADRTD 332
Query: 301 YDLRAHT 307
YDLR+H+
Sbjct: 333 YDLRSHS 339
>sp|Q8U0G2|SYG_PYRFU Glycine--tRNA ligase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=glyS PE=3 SV=1
Length = 568
Score = 249 bits (637), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/306 (43%), Positives = 180/306 (58%), Gaps = 24/306 (7%)
Query: 3 LLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLRED 62
++E E+ +P +TPE V ASGHVEK D +V+ +K G +RAD L+++
Sbjct: 54 FIREGFFEIETPDITPEQVFIASGHVEKFVDPLVECKKCGARFRADHLIEE--------- 104
Query: 63 VRLSLEQAAELRRTLAM-MDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSVG 121
TL + ++ S EE+ I+E+ I P+ LSD + FNLMF+T +G
Sbjct: 105 -------------TLGIDVEGKSAEEMTKIIREHNIRCPECGGELSDVWYFNLMFETYIG 151
Query: 122 PSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFT 181
P AY+RPETA GIFVNFK L NKLPF QIG+A+RNEISPRQG R+REFT
Sbjct: 152 PYKDKKAYLRPETAQGIFVNFKRLNAFARNKLPFGVFQIGKAYRNEISPRQGMIRLREFT 211
Query: 182 LAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIG 241
AE+E F +P + HP F EVK+ ++P E Q+ ++ EAV +G V N
Sbjct: 212 QAEVEIFFNPNETEHPHFDEVKDEVLRLYPIEHQLKDLGMIELTAEEAVKKGYVMNTFFA 271
Query: 242 YFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECS-YGWIECVGIADRSA 300
Y++ + L +GI +D +RFRQ L E AHY+AD WDAEI +GW+ECVG+A R+
Sbjct: 272 YYMVMIKRILLDIGIPEDKIRFRQQLPEERAHYSADTWDAEIYSERFGWVECVGLAYRTD 331
Query: 301 YDLRAH 306
YDL H
Sbjct: 332 YDLSRH 337
>sp|Q5JID8|SYG_PYRKO Glycine--tRNA ligase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=glyS PE=3 SV=1
Length = 570
Score = 248 bits (633), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 134/303 (44%), Positives = 177/303 (58%), Gaps = 22/303 (7%)
Query: 5 KENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLREDVR 64
+E E+ +P +TPE V ASGHVEK D +V+ +K G +RAD L++ E L D
Sbjct: 58 REGFFELETPDITPEKVFIASGHVEKFVDPLVECKKCGARFRADHLVE----EALGIDT- 112
Query: 65 LSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSVGPSG 124
+ +S E L I+E+ I P+ LSD + FNLMF+T +GP G
Sbjct: 113 ----------------EGMSAEHLTQLIREHDIRCPECGGELSDVWYFNLMFETRIGPYG 156
Query: 125 LTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFTLAE 184
Y+RPETA GIFVNF+ L NKLPF QIG+A+RNEISPRQG R+REFT AE
Sbjct: 157 DQKGYLRPETAQGIFVNFRRLNAFARNKLPFGVFQIGKAYRNEISPRQGMLRLREFTQAE 216
Query: 185 IEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIGYFI 244
E F +P + HP F EVK+ + ++P E Q+ S ++ EAV +G + N Y++
Sbjct: 217 AEIFFNPNETEHPHFDEVKDEKLRLYPIEHQLKNLSMIELTAEEAVKKGYIMNTFFAYYM 276
Query: 245 GRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECS-YGWIECVGIADRSAYDL 303
V L +GI +D +RFRQ L E AHY+ D WDAEI +GW+ECVGIA+R YDL
Sbjct: 277 VMVKRVLLDIGIPEDKIRFRQQLPEERAHYSRDTWDAEIHSERFGWVECVGIANRGDYDL 336
Query: 304 RAH 306
H
Sbjct: 337 SRH 339
>sp|Q9V176|SYG_PYRAB Glycine--tRNA ligase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=glyS PE=3 SV=1
Length = 571
Score = 247 bits (630), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 180/306 (58%), Gaps = 24/306 (7%)
Query: 3 LLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLRED 62
++E E+ +P +TPE V ASGHVEK D +V+ +K G +RAD L+++
Sbjct: 56 FIREGFFEIETPDITPEQVFIASGHVEKFVDPIVECKKCGARFRADHLIEE--------- 106
Query: 63 VRLSLEQAAELRRTLAM-MDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSVG 121
TL + ++ S EE+ I+E+ I P+ L D + FNLMF+T +G
Sbjct: 107 -------------TLGIDVEGKSAEEMTKIIREHNIKCPECGGELGDVFYFNLMFETYIG 153
Query: 122 PSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFT 181
P AY+RPETA GIFVNFK L NKLPF QIG+A+RNEISPRQG R+REFT
Sbjct: 154 PYKDKKAYLRPETAQGIFVNFKRLNAFARNKLPFGVFQIGKAYRNEISPRQGMIRLREFT 213
Query: 182 LAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIG 241
AE+E F +P + HP F EVK+ + ++P E Q+ ++ EAV +G + N
Sbjct: 214 QAEVEIFFNPNETEHPHFDEVKHEKLRLYPIENQLKDLGMIELTAEEAVKKGYLMNTFFA 273
Query: 242 YFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECS-YGWIECVGIADRSA 300
Y++ + L +GI +D +RFRQ L E AHY+AD WDAE+ +GW+ECVG+A R+
Sbjct: 274 YYLVMIKKILLDIGIPEDKIRFRQQLPEERAHYSADTWDAEVYSERFGWVECVGLAYRTD 333
Query: 301 YDLRAH 306
YDL H
Sbjct: 334 YDLSRH 339
>sp|C6A317|SYG_THESM Glycine--tRNA ligase OS=Thermococcus sibiricus (strain MM 739 / DSM
12597) GN=glyS PE=3 SV=1
Length = 570
Score = 245 bits (625), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 176/306 (57%), Gaps = 22/306 (7%)
Query: 3 LLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLRED 62
++E E+ +P +TPE V ASGHV+K D + + +K G+ +RAD ++++
Sbjct: 56 FIREGFFEIETPDITPEEVFIASGHVDKFVDPLTECKKCGSRFRADHIVEEV-------- 107
Query: 63 VRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSVGP 122
L ++ + LS E L I+E+ I P+ L+D + FNLMF+T +GP
Sbjct: 108 --LGID-----------TEGLSAEHLTQLIREHDIKCPECGGELADVWYFNLMFETYIGP 154
Query: 123 SGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFTL 182
Y+RPETA GIFVNFK L N+LPF QIG+A+RNEISPRQG R+REF+
Sbjct: 155 YKDKKGYLRPETAQGIFVNFKRLNNFARNQLPFGVFQIGKAYRNEISPRQGMLRLREFSQ 214
Query: 183 AEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIGY 242
AE+E F DPK K HP F EVK+ +P E Q+ ++ L EAV +G V N Y
Sbjct: 215 AEVEIFFDPKQKEHPHFEEVKDEVLRFYPIENQLKNLGMIELTLDEAVKKGYVMNTFFAY 274
Query: 243 FIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECS-YGWIECVGIADRSAY 301
++ V L +GI + +RFRQ L E AHY++D WD EI +GWIECVGIA R Y
Sbjct: 275 YMAMVKRILLDIGIPANKIRFRQQLPEERAHYSSDTWDVEIHSERFGWIECVGIAYRGNY 334
Query: 302 DLRAHT 307
DL H
Sbjct: 335 DLSRHV 340
>sp|O29346|SYG_ARCFU Glycine--tRNA ligase OS=Archaeoglobus fulgidus (strain ATCC 49558 /
VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=glyS PE=3
SV=1
Length = 570
Score = 240 bits (612), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/308 (43%), Positives = 179/308 (58%), Gaps = 30/308 (9%)
Query: 1 HFLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLR 60
+F++ E E+ +P + E V ASGH TD ++ E G YRAD +K
Sbjct: 50 YFVINERAAEIDTPTIGIEEVFIASGHATSFTDVAIECENCGRVYRADHYVK-------- 101
Query: 61 EDVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSV 120
E + + +++ E + + + DL E G + K DP P NLMF T++
Sbjct: 102 EKLGIEVDETVEAVKEVMEVYDLKCE-CGGRFK--------------DPAPMNLMFSTTI 146
Query: 121 GPSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREF 180
GP Y+RPETA G+FV+FK L KLPF AQIG+A+RNEISPRQG R+REF
Sbjct: 147 GPGKGKKGYLRPETAQGMFVDFKRLANFFREKLPFGVAQIGRAYRNEISPRQGVIRLREF 206
Query: 181 TLAEIEHFVDPKDKSHPKFS-EVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNET 239
AE+E FV P +K HP FS K++ L+ ++ +Q +I L EAV +GI+ N+
Sbjct: 207 NQAELEFFVHPGEKKHPHFSLYAKDVVKLV----DKFDSQH--EITLEEAVEKGIIANQI 260
Query: 240 IGYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRS 299
+ YFIG+ FL +GI + LRFRQH E AHYA DCWDAE+ SYGWIE VGIADR+
Sbjct: 261 LAYFIGKTRRFLLEIGIKDEKLRFRQHKDVERAHYATDCWDAEVLTSYGWIEVVGIADRT 320
Query: 300 AYDLRAHT 307
YDL+ H+
Sbjct: 321 NYDLKRHS 328
>sp|Q8TYY9|SYG_METKA Glycine--tRNA ligase OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=glyS PE=3 SV=1
Length = 571
Score = 231 bits (588), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 126/309 (40%), Positives = 177/309 (57%), Gaps = 24/309 (7%)
Query: 1 HFLLKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLR 60
+++ KE +E+ +P + V +ASGHVE D M + G F+RAD L E+L
Sbjct: 53 YYVHKEGFMEIEAPNLLIGEVFEASGHVEHFIDPMTHCSECGEFFRADHL----AEEELG 108
Query: 61 EDVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSV 120
D + +S EEL I+E+ + P+ L++ FNLMF T++
Sbjct: 109 VDA-----------------EGMSPEELEDLIREHDLRCPECGGELAEVTEFNLMFDTNI 151
Query: 121 GPSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREF 180
GP Y+RPETA IF+ FKDLY KLPF QIG+A+RNEISPRQG R+REF
Sbjct: 152 GPKEGRTGYLRPETAQAIFIQFKDLYRWARQKLPFGVVQIGRAYRNEISPRQGVIRLREF 211
Query: 181 TLAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAK-KIRLGEAVSRGIVNNET 239
T AE E F DP++K +P F + +P EEQ ++ + EAV G+V ++
Sbjct: 212 TQAEAEVFFDPEEKEYPGFERYADEVLKFYPIEEQRKENGEMLEMSVREAVEEGMV-SQP 270
Query: 240 IGYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECS-YGWIECVGIADR 298
IGYF+G L+ +G+ + +R RQHL E AHYA+DCWD E++ +GW+E VGIADR
Sbjct: 271 IGYFLGLTKRMLNEMGVPNEAIRSRQHLPEERAHYASDCWDVEVKLERFGWVEVVGIADR 330
Query: 299 SAYDLRAHT 307
+ YDL+ H+
Sbjct: 331 TDYDLKKHS 339
>sp|Q9YBF8|SYG_AERPE Glycine--tRNA ligase OS=Aeropyrum pernix (strain ATCC 700893 / DSM
11879 / JCM 9820 / NBRC 100138 / K1) GN=glyS PE=3 SV=1
Length = 583
Score = 184 bits (468), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 173/312 (55%), Gaps = 27/312 (8%)
Query: 1 HFLL--KENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEK 58
+F+L +++++E+ +P + PE V ASGHVE TD +V+ G +RAD L+++
Sbjct: 53 YFVLMHQDHVVEIETPVIGPEKVYIASGHVEHFTDPIVRCTSCGRTFRADHLVEE----- 107
Query: 59 LREDVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQT 118
+L AE LSV EL I+E G+ P + L FNL+F+T
Sbjct: 108 -------ALGINAE---------GLSVSELDRIIRERGLRCPVCQGELGRVETFNLLFRT 151
Query: 119 SVGPSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVR 178
+GP + Y+RPE A GIFV FK +Y +++P AQ+G+ RNEISPRQ R+R
Sbjct: 152 QIGPYEGSVGYLRPELAQGIFVAFKRVYEAMRSRIPLGIAQVGRVGRNEISPRQALVRLR 211
Query: 179 EFTLAEIEHFVDPKDK--SHPKFSEVKNLEFLMFPRE-EQMSAQSAKKIRLGEAVSRGIV 235
EFT+ E+E+F+DP+D+ S P F + + + + E ++ + + +L EAV+ G+V
Sbjct: 212 EFTIMEMEYFIDPEDQWGSCPFFHRMADSKLPILTYEAKRRGEEKPESFKLEEAVNEGVV 271
Query: 236 NNETIGYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECS-YGWIECVG 294
+ +GY++ F+ LG+ D + F + E AHY++ +D ++ S +GWIE G
Sbjct: 272 ISPCLGYWMAVGMRFVEDLGVPSDSIMFEEKGPEERAHYSSQTFDQLVKVSRWGWIEVAG 331
Query: 295 IADRSAYDLRAH 306
+ R YDL H
Sbjct: 332 HSYRGDYDLSRH 343
>sp|Q8CSD5|SYG_STAES Glycine--tRNA ligase OS=Staphylococcus epidermidis (strain ATCC
12228) GN=glyQS PE=3 SV=1
Length = 463
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 137/291 (47%), Gaps = 61/291 (20%)
Query: 21 VLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFC-NEKLREDVRLSLEQAAELRRTLAM 79
+ASGH+ D M+ ++ + YRAD+L++D+ NEK E+ +
Sbjct: 73 TWEASGHLGNFNDPMIDNKDSKIRYRADKLIEDYMQNEKGDENF---------------I 117
Query: 80 MDDLSVEELGAKIKEYGITAPDTKNP-LSDPYPFNLMFQT--SVGPSGLTAAYVRPETAP 136
D LS +E+ I + GI P +K +D FNLMF+T V ++RPETA
Sbjct: 118 ADGLSFDEMKKIIDDEGIVCPVSKTANWTDIRQFNLMFKTFQGVTEDSTNELFLRPETAQ 177
Query: 137 GIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFTLAEIEHFVDPKDKSH 196
GIFVN+K++ + KLPF QIG++FRNEI+P R REF E+E F P
Sbjct: 178 GIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFCKPG---- 233
Query: 197 PKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIGYFIGRVYLFLSRLGI 256
E++ Q+ K E +L+ L I
Sbjct: 234 -----------------EEIEWQNYWKTFASE---------------------WLTDLNI 255
Query: 257 DQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAHT 307
+D++R R H +E++HY+ D E + +GW E GIA R+ YDLR H+
Sbjct: 256 SEDNMRLRDHDEDELSHYSNATTDIEYKFPFGWGELWGIASRTDYDLRQHS 306
>sp|Q5HNY2|SYG_STAEQ Glycine--tRNA ligase OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=glyQS PE=3 SV=1
Length = 463
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 137/291 (47%), Gaps = 61/291 (20%)
Query: 21 VLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFC-NEKLREDVRLSLEQAAELRRTLAM 79
+ASGH+ D M+ ++ + YRAD+L++D+ NEK E+ +
Sbjct: 73 TWEASGHLGNFNDPMIDNKDSKIRYRADKLIEDYMQNEKGDENF---------------I 117
Query: 80 MDDLSVEELGAKIKEYGITAPDTKNP-LSDPYPFNLMFQT--SVGPSGLTAAYVRPETAP 136
D LS +E+ I + GI P +K +D FNLMF+T V ++RPETA
Sbjct: 118 ADGLSFDEMKKIIDDEGIVCPVSKTANWTDIRQFNLMFKTFQGVTEDSTNELFLRPETAQ 177
Query: 137 GIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFTLAEIEHFVDPKDKSH 196
GIFVN+K++ + KLPF QIG++FRNEI+P R REF E+E F P
Sbjct: 178 GIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFCKPG---- 233
Query: 197 PKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIGYFIGRVYLFLSRLGI 256
E++ Q+ K E +L+ L I
Sbjct: 234 -----------------EEIEWQNYWKTFASE---------------------WLTDLNI 255
Query: 257 DQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAHT 307
+D++R R H +E++HY+ D E + +GW E GIA R+ YDLR H+
Sbjct: 256 SEDNMRLRDHDEDELSHYSNATTDIEYKFPFGWGELWGIASRTDYDLRQHS 306
>sp|P56206|SYG_THET8 Glycine--tRNA ligase OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=glyQS PE=1 SV=3
Length = 506
Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 144/308 (46%), Gaps = 49/308 (15%)
Query: 5 KENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLREDVR 64
+++M + + +T +VL SGH D MV + T YR D LLK+ E L+ R
Sbjct: 58 RDDMEGLDASVLTHRLVLHYSGHEATFADPMVDNRITKKRYRLDHLLKEQPEEVLKRLYR 117
Query: 65 -LSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNP--LSDPYPFNLMFQTSVG 121
+ +E+ AMM + E G + G+ P + P + P FN+MF+T VG
Sbjct: 118 AMEVEEENLHALVQAMMQ--APERAGGAMTAAGVLDPASGEPGDWTPPRYFNMMFKTYVG 175
Query: 122 P--SGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVRE 179
P + AY+RPETA GIFVNFK++ KLPF AQIG+AFRNEI+PR RVRE
Sbjct: 176 PVEDEASLAYLRPETAQGIFVNFKNVLDATSRKLPFGIAQIGKAFRNEITPRNFIFRVRE 235
Query: 180 FTLAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNET 239
F EIE+FV P + + + R
Sbjct: 236 FEQMEIEYFVRPGEDEY-------------WHR--------------------------- 255
Query: 240 IGYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRS 299
Y++ + +G+ +++L Q E+AHYA D +G E GIA+R+
Sbjct: 256 --YWVEERLKWWQEMGLSRENLVPYQQPPEELAHYAKATVDILYRFPHGLEELEGIANRT 313
Query: 300 AYDLRAHT 307
+DL +HT
Sbjct: 314 DFDLGSHT 321
>sp|Q8RB46|SYG_THETN Glycine--tRNA ligase OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=glyQS PE=3
SV=1
Length = 461
Score = 134 bits (338), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 140/289 (48%), Gaps = 61/289 (21%)
Query: 21 VLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLREDVRLSLEQAAELRRTLAMM 80
V ASGHV +D ++ ++ + +RADQL++D+ EK + +S+E
Sbjct: 75 VWVASGHVASFSDPLMDCKECKSRFRADQLIEDYIKEK---GLDISIE------------ 119
Query: 81 DDLSVEELGAKIKEYGITAPDT-KNPLSDPYPFNLMFQTSVGPS--GLTAAYVRPETAPG 137
+ E++ IKE+ + P + ++ FNLMF+T VG + + ++RPETA G
Sbjct: 120 -GWTNEQMMEFIKEHKVPCPKCGAHNFTEIRKFNLMFKTYVGVTEDSKSEVFLRPETAQG 178
Query: 138 IFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFTLAEIEHFVDPKDKSHP 197
IFVNFK++ + K+PF QIG++FRNEI+P R REF E+E F P +
Sbjct: 179 IFVNFKNVQRTSRKKIPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFCKPGE---- 234
Query: 198 KFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIGYFIGRVYLFLSRLGID 257
++E+ + R+ M +L G+
Sbjct: 235 ------DMEWFNYWRQFCMD--------------------------------WLVEFGLK 256
Query: 258 QDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAH 306
+++LRFR H E++HY+ D E +GW E GIA+R+ YDLR H
Sbjct: 257 RENLRFRDHKKEELSHYSTATTDIEYNFPFGWGELWGIANRTDYDLRQH 305
>sp|A5N4L2|SYG_CLOK5 Glycine--tRNA ligase OS=Clostridium kluyveri (strain ATCC 8527 /
DSM 555 / NCIMB 10680) GN=glyQS PE=3 SV=1
Length = 463
Score = 134 bits (337), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 140/289 (48%), Gaps = 60/289 (20%)
Query: 21 VLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLREDVRLSLEQAAELRRTLAMM 80
V ASGHV +D ++ ++ + +RAD+L+++ K +E+A+
Sbjct: 75 VWVASGHVGNFSDPLMDCKECKSRFRADKLVEEHMTSK-------GVEKAS--------A 119
Query: 81 DDLSVEELGAKIKEYGITAPDT-KNPLSDPYPFNLMFQTSVGPSGLTAA--YVRPETAPG 137
D + E+L I + I PD K +D FNLMF+T G + + A Y+RPETA G
Sbjct: 120 DGWNNEKLKEYIDDNNIVCPDCGKTNFTDIRQFNLMFKTFQGVTEDSKAEIYLRPETAQG 179
Query: 138 IFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFTLAEIEHFVDPKDKSHP 197
IFVNFK++ + K+PF AQIG+AFRNEI+P R REF E+E F +P
Sbjct: 180 IFVNFKNVQRTSRKKIPFGIAQIGKAFRNEITPGNFTFRTREFEQMELEFFCEPG----- 234
Query: 198 KFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIGYFIGRVYLFLSRLGID 257
+LE+ + +E + FL +LGI
Sbjct: 235 -----TDLEWHNYWKE--------------------------------YCWKFLLKLGIK 257
Query: 258 QDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAH 306
++++RFR H E++HY+ D E +GW E GIADR+ YDL H
Sbjct: 258 EENIRFRVHEKEELSHYSNATSDIEYLFPFGWGELWGIADRTDYDLTQH 306
>sp|B9DY74|SYG_CLOK1 Glycine--tRNA ligase OS=Clostridium kluyveri (strain NBRC 12016)
GN=glyQS PE=3 SV=1
Length = 463
Score = 134 bits (337), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 140/289 (48%), Gaps = 60/289 (20%)
Query: 21 VLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLREDVRLSLEQAAELRRTLAMM 80
V ASGHV +D ++ ++ + +RAD+L+++ K +E+A+
Sbjct: 75 VWVASGHVGNFSDPLMDCKECKSRFRADKLVEEHMTSK-------GVEKAS--------A 119
Query: 81 DDLSVEELGAKIKEYGITAPDT-KNPLSDPYPFNLMFQTSVGPSGLTAA--YVRPETAPG 137
D + E+L I + I PD K +D FNLMF+T G + + A Y+RPETA G
Sbjct: 120 DGWNNEKLKEYIDDNNIVCPDCGKTNFTDIRQFNLMFKTFQGVTEDSKAEIYLRPETAQG 179
Query: 138 IFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFTLAEIEHFVDPKDKSHP 197
IFVNFK++ + K+PF AQIG+AFRNEI+P R REF E+E F +P
Sbjct: 180 IFVNFKNVQRTSRKKIPFGIAQIGKAFRNEITPGNFTFRTREFEQMELEFFCEPG----- 234
Query: 198 KFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIGYFIGRVYLFLSRLGID 257
+LE+ + +E + FL +LGI
Sbjct: 235 -----TDLEWHNYWKE--------------------------------YCWKFLLKLGIK 257
Query: 258 QDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAH 306
++++RFR H E++HY+ D E +GW E GIADR+ YDL H
Sbjct: 258 EENIRFRVHEKEELSHYSNATSDIEYLFPFGWGELWGIADRTDYDLTQH 306
>sp|Q72L85|SYG_THET2 Glycine--tRNA ligase OS=Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039) GN=glyQS PE=3 SV=1
Length = 506
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 144/308 (46%), Gaps = 49/308 (15%)
Query: 5 KENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLREDVR 64
+++M + + +T +VL SGH D MV + T YR D LLK+ E L+ R
Sbjct: 58 RDDMEGLDASVLTHRLVLHYSGHEATFADPMVDNRITKKRYRLDHLLKEQPEEVLKRLYR 117
Query: 65 -LSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNP--LSDPYPFNLMFQTSVG 121
+ +E+ AMM + E G + G+ P + P + P FN+MF+T VG
Sbjct: 118 AMEVEEGNLHALVQAMMQ--APERAGGAMTAAGVLDPASGEPGDWTPPRYFNMMFKTYVG 175
Query: 122 PSGLTAA--YVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVRE 179
P AA Y+RPETA GIFVNFK++ KLPF AQIG+AFRNEI+PR RVRE
Sbjct: 176 PVEDEAALAYLRPETAQGIFVNFKNVLDATSRKLPFGIAQIGKAFRNEITPRNFIFRVRE 235
Query: 180 FTLAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNET 239
F EIE+FV P + + + R
Sbjct: 236 FEQMEIEYFVRPGEDEY-------------WHR--------------------------- 255
Query: 240 IGYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRS 299
Y++ + +G+ +++L + E+AHYA D +G E GIA+R+
Sbjct: 256 --YWVEERLKWWQEMGLSRENLVPYEQPPEELAHYAKATVDILYRFPHGLEELEGIANRT 313
Query: 300 AYDLRAHT 307
+DL +HT
Sbjct: 314 DFDLGSHT 321
>sp|Q97EB8|SYG_CLOAB Glycine--tRNA ligase OS=Clostridium acetobutylicum (strain ATCC 824
/ DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=glyQS
PE=3 SV=1
Length = 462
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 137/289 (47%), Gaps = 60/289 (20%)
Query: 21 VLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLREDVRLSLEQAAELRRTLAMM 80
V ASGH+ +D ++ ++ + +RAD++++D+ E Q AE+ A
Sbjct: 75 VWVASGHLGGFSDPLMDCKECKSRFRADKIVEDYLTE-----------QGAEV----ASA 119
Query: 81 DDLSVEELGAKIKEYGITAPDT-KNPLSDPYPFNLMFQT--SVGPSGLTAAYVRPETAPG 137
D S E+L IK+ I P K + FNLMF+T V + Y+RPETA G
Sbjct: 120 DGWSNEKLENFIKDKHIKCPKCGKENFTSIRKFNLMFKTFQGVTEDASSEIYLRPETAQG 179
Query: 138 IFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFTLAEIEHFVDPKDKSHP 197
IFVNFK++ ++ K+PF QIG+AFRNEI+P R REF E+E F P
Sbjct: 180 IFVNFKNVQRSSRKKVPFGIGQIGKAFRNEITPGNFTFRTREFEQMELEFFCKPG----- 234
Query: 198 KFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIGYFIGRVYLFLSRLGID 257
+LE+ Y+ + FL LGI+
Sbjct: 235 -----TDLEWFK--------------------------------YWKDYCWSFLLDLGIN 257
Query: 258 QDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAH 306
+++LRFR H A E+ Y+ D E + +GW E G+ADR+ YDL+ H
Sbjct: 258 KENLRFRDHSAEELVFYSKATSDIEYKFPFGWGELWGVADRTDYDLKKH 306
>sp|A3DF15|SYG_CLOTH Glycine--tRNA ligase OS=Clostridium thermocellum (strain ATCC 27405
/ DSM 1237) GN=glyQS PE=3 SV=1
Length = 462
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 144/310 (46%), Gaps = 65/310 (20%)
Query: 3 LLKENMLEVRSPC---VTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKL 59
++EN V C + P+V + ASGHV +D ++ ++ T +RAD++++++ N K
Sbjct: 55 FVQENPYNVGVDCAILMNPQVWV-ASGHVGGFSDPLIDCKECKTRHRADKMIEEW-NLKN 112
Query: 60 REDVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDTKNP-LSDPYPFNLMFQT 118
E+V++ D S E L I+E G+T P+ +D FNLMF+T
Sbjct: 113 NENVKV---------------DGWSNEMLMNYIREKGVTCPECGGKNFTDIRKFNLMFKT 157
Query: 119 --SVGPSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSR 176
V + Y+RPETA GIFVNFK++ K+PF QIG++FRNEI+P R
Sbjct: 158 FQGVTEDSKSEIYLRPETAQGIFVNFKNVQRTTRKKIPFGIGQIGKSFRNEITPGNFIFR 217
Query: 177 VREFTLAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVN 236
REF E+E F +P +
Sbjct: 218 TREFEQMELEFFCEPG------------------------------------------TD 235
Query: 237 NETIGYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIA 296
E Y+ + +L L I +++LR R H E++HY+ D E +GW E GIA
Sbjct: 236 LEWFEYWKNFCFNWLLSLNIKKENLRMRDHSKEELSHYSNATTDIEYLFPFGWGELWGIA 295
Query: 297 DRSAYDLRAH 306
DR+ +DLR H
Sbjct: 296 DRTDFDLRQH 305
>sp|Q2SRY5|SYG_MYCCT Glycine--tRNA ligase OS=Mycoplasma capricolum subsp. capricolum
(strain California kid / ATCC 27343 / NCTC 10154)
GN=glyQS PE=3 SV=1
Length = 456
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 145/311 (46%), Gaps = 68/311 (21%)
Query: 2 FLLKENMLEV--RSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKL 59
F +K+N L + S + V KASGH++ D ++ + + +RAD+L+++F
Sbjct: 52 FFVKKNPLNIGLDSSIILNSKVWKASGHIDGFNDPLIDCKNCKSRWRADKLIEEF----- 106
Query: 60 REDVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDT-KNPLSDPYPFNLMFQT 118
+ +M +L +EE I + I K + F LMF+T
Sbjct: 107 ------------DPSINTGIMSNLQLEEY---INQNNIVCKKCQKKDFTQIRKFALMFKT 151
Query: 119 SVG--PSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSR 176
+ G + Y+RPETA GIF+NFK++ + KLPF QIG++FRNEI+P R
Sbjct: 152 NQGVLEDDSSIVYLRPETAQGIFINFKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFR 211
Query: 177 VREFTLAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVN 236
REF E+E F DP D +
Sbjct: 212 TREFEQMELEFFFDPND------------------------------------------S 229
Query: 237 NETIGYFIGRVYLFLS-RLGIDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGI 295
N+ Y++ ++ +FL+ ++ +D+++ + R++L +E+AHYA D E +GW E GI
Sbjct: 230 NDWFKYWLEQIEIFLTQKISLDKNNYKIRENLKDELAHYALKTSDIEFNFPFGWGELWGI 289
Query: 296 ADRSAYDLRAH 306
+ RS +DL+ H
Sbjct: 290 SHRSDFDLKVH 300
>sp|B9DNL1|SYG_STACT Glycine--tRNA ligase OS=Staphylococcus carnosus (strain TM300)
GN=glyQS PE=3 SV=1
Length = 463
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 134/292 (45%), Gaps = 63/292 (21%)
Query: 21 VLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFC-NEKLREDVRLSLEQAAELRRTLAM 79
+ASGH+ D M+ ++ + YRAD+L++D+ NEK E+ +
Sbjct: 73 TWEASGHLGNFNDPMIDNKDSKIRYRADKLIEDYMQNEKGDENF---------------I 117
Query: 80 MDDLSVEELGAKIKEYGITAP--DTKNPLSDPYPFNLMFQT--SVGPSGLTAAYVRPETA 135
D LS +E+ I E GI P T N +D FNLMF+T V ++RPETA
Sbjct: 118 ADGLSFDEMKRIIDEEGIKDPVSGTSN-WTDIRQFNLMFKTFQGVTEDSTNEIFLRPETA 176
Query: 136 PGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFTLAEIEHFVDPKDKS 195
GIFVN+K++ + KLPF QIG++FRNEI+P R REF E+E F P
Sbjct: 177 QGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFCKP---- 232
Query: 196 HPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIGYFIGRVYLFLSRLG 255
GE + E Y+ +L LG
Sbjct: 233 -------------------------------GEEI-------EWQNYWKTFAEKWLLDLG 254
Query: 256 IDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAHT 307
I D +R R H +E++HY+ D E + +GW E GIA R+ YDL+ H+
Sbjct: 255 IKNDSIRLRDHDEDELSHYSNATTDIEYKFPFGWGELWGIASRTDYDLKQHS 306
>sp|A4ITQ8|SYG_GEOTN Glycine--tRNA ligase OS=Geobacillus thermodenitrificans (strain
NG80-2) GN=glyQS PE=3 SV=1
Length = 466
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 136/290 (46%), Gaps = 63/290 (21%)
Query: 21 VLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLREDVRLSLEQAAELRRTLAMM 80
+ASGH+ D MV ++ +RAD+L+ EQA E + ++
Sbjct: 79 TWEASGHLGNFNDPMVDCKQCKARHRADKLI----------------EQALEEKGIEMVV 122
Query: 81 DDLSVEELGAKIKEYGITAPDTKN-PLSDPYPFNLMFQT--SVGPSGLTAAYVRPETAPG 137
D L + ++ I+EY I P+ + ++ FNLMF+T V S Y+RPETA G
Sbjct: 123 DGLPLAKMEELIREYDIACPECGSRDFTNVRQFNLMFKTYQGVTESSANEIYLRPETAQG 182
Query: 138 IFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFTLAEIEHFVDPKDKSHP 197
IFVNFK++ KLPF AQIG++FRNEI+P R REF E+E F P +
Sbjct: 183 IFVNFKNVQRTMRKKLPFGIAQIGKSFRNEITPGNFTFRTREFEQMELEFFCKPGE---- 238
Query: 198 KFSEVKNLEFL-MFPREEQMSAQSAKKIRLGEAVSRGIVNNETIGYFIGRVYLFLSRLGI 256
E+K ++ F +E +L LG+
Sbjct: 239 ---ELKWFDYWKQFCKE------------------------------------WLLSLGM 259
Query: 257 DQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAH 306
+++H+R R H E++HY+ D E + +GW E GIA R+ YDL+ H
Sbjct: 260 NEEHIRLRDHTKEELSHYSNATTDIEYQFPFGWGELWGIASRTDYDLKQH 309
>sp|B8I2Z6|SYG_CLOCE Glycine--tRNA ligase OS=Clostridium cellulolyticum (strain ATCC
35319 / DSM 5812 / JCM 6584 / H10) GN=glyQS PE=3 SV=1
Length = 462
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 138/294 (46%), Gaps = 62/294 (21%)
Query: 16 VTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLREDVRLSLEQAAELRR 75
+ P+V + ASGHV +D ++ + T +RAD+L++D+ NE E R
Sbjct: 71 MNPQVWV-ASGHVGGFSDPLIDCKDCKTRHRADKLIEDWNNE-----------NNIEFR- 117
Query: 76 TLAMMDDLSVEELGAKIKEYGITAPDTKNP-LSDPYPFNLMFQT--SVGPSGLTAAYVRP 132
+D L EEL IK+ G+ P + +D FNLMF+T V + Y+RP
Sbjct: 118 ----VDGLKNEELMQYIKDKGVRCPSCGSANFTDIRKFNLMFKTFQGVTEDSKSEIYLRP 173
Query: 133 ETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFTLAEIEHFVDPK 192
ETA GIFVNFK++ K+PF QIG++FRNEI+P R REF E+E F +P
Sbjct: 174 ETAQGIFVNFKNVQRTTRRKIPFGIGQIGKSFRNEITPGNFTFRTREFEQMELEFFCEPG 233
Query: 193 DKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIGYFIGRVYLFLS 252
K+LE+ Y+ Y +L
Sbjct: 234 ----------KDLEWFK--------------------------------YWKDFCYNWLL 251
Query: 253 RLGIDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAH 306
L + +++L+ R H E++HY+ D E +GW E GIADR+ +DL+ H
Sbjct: 252 SLNMKKENLKLRDHEKEELSHYSNATTDIEFLFPFGWGELWGIADRTDFDLKQH 305
>sp|Q04Z62|SYG_LEPBL Glycine--tRNA ligase OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain L550) GN=glyQS PE=3 SV=1
Length = 464
Score = 131 bits (329), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 141/308 (45%), Gaps = 67/308 (21%)
Query: 4 LKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLREDV 63
L+E+++ + S + V +ASGHV TD ++ + T RAD+ L+D
Sbjct: 62 LREDVVGLDSSILLNPKVWEASGHVSNFTDPLIDCKNCKTRIRADKFLED---------- 111
Query: 64 RLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDT--KNPLSDPYPFNLMFQTSVG 121
Q E L++E++ IKE + P+ + ++ FNLMF+TS G
Sbjct: 112 -----QKGE-----GFATGLTLEKMNQVIKENNFSCPNCGQRGTFTEARDFNLMFKTSHG 161
Query: 122 PSGLTA--AYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVRE 179
S + Y+RPETA GIF+NFK++ K+PF AQIG++FRNEI RQ R RE
Sbjct: 162 ASAEDSLDIYLRPETAQGIFLNFKNVVSTTRRKIPFGIAQIGKSFRNEIMARQFVFRTRE 221
Query: 180 FTLAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNET 239
F E+E F +P E
Sbjct: 222 FEQMEMEFFCEPG------------------------------------------TQKEW 239
Query: 240 IGYFIGRVYLFLS-RLGIDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADR 298
+++ +L+ ++G+ +++LR R+H E++ Y+ D E + ++GW E GIA R
Sbjct: 240 FSHWVNYCMNWLTEQVGVKKENLRIREHEKEELSFYSEGTSDIEFKYNFGWGELWGIASR 299
Query: 299 SAYDLRAH 306
+ YDL H
Sbjct: 300 TDYDLNQH 307
>sp|Q04QV5|SYG_LEPBJ Glycine--tRNA ligase OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain JB197) GN=glyQS PE=3 SV=1
Length = 464
Score = 131 bits (329), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 141/308 (45%), Gaps = 67/308 (21%)
Query: 4 LKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLREDV 63
L+E+++ + S + V +ASGHV TD ++ + T RAD+ L+D
Sbjct: 62 LREDVVGLDSSILLNPKVWEASGHVSNFTDPLIDCKNCKTRIRADKFLED---------- 111
Query: 64 RLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDT--KNPLSDPYPFNLMFQTSVG 121
Q E L++E++ IKE + P+ + ++ FNLMF+TS G
Sbjct: 112 -----QKGE-----GFATGLTLEKMNQVIKENNFSCPNCGQRGTFTEARDFNLMFKTSHG 161
Query: 122 PSGLTA--AYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVRE 179
S + Y+RPETA GIF+NFK++ K+PF AQIG++FRNEI RQ R RE
Sbjct: 162 ASAEDSLDIYLRPETAQGIFLNFKNVVSTTRRKIPFGIAQIGKSFRNEIMARQFVFRTRE 221
Query: 180 FTLAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNET 239
F E+E F +P E
Sbjct: 222 FEQMEMEFFCEPG------------------------------------------TQKEW 239
Query: 240 IGYFIGRVYLFLS-RLGIDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADR 298
+++ +L+ ++G+ +++LR R+H E++ Y+ D E + ++GW E GIA R
Sbjct: 240 FSHWVNYCMNWLTEQVGVKKENLRIREHEKEELSFYSEGTSDIEFKYNFGWGELWGIASR 299
Query: 299 SAYDLRAH 306
+ YDL H
Sbjct: 300 TDYDLNQH 307
>sp|A9KJ36|SYG_CLOPH Glycine--tRNA ligase OS=Clostridium phytofermentans (strain ATCC
700394 / DSM 18823 / ISDg) GN=glyQS PE=3 SV=1
Length = 462
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 147/314 (46%), Gaps = 63/314 (20%)
Query: 3 LLKENMLEVRSPC---VTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKL 59
+++N V C + P+ + ASGH+ +D ++ ++ +RAD++++D+ EK
Sbjct: 53 FIQQNPYNVGVDCAILMNPQTWV-ASGHLGSFSDPLMDCKECRERFRADKIIEDYATEK- 110
Query: 60 REDVRLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDT-KNPLSDPYPFNLMFQT 118
L+LE + +D S EE+ A I++ I P K+ +D FNLMF+T
Sbjct: 111 ----NLTLEGS---------VDAWSHEEMSAYIEKNNIPCPTCGKHNFTDIRQFNLMFKT 157
Query: 119 --SVGPSGLTAAYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSR 176
V Y+RPETA GIFVNFK++ + K+PF Q+G++FRNEI+P R
Sbjct: 158 FQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQVGKSFRNEITPGNFTFR 217
Query: 177 VREFTLAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVN 236
REF E+E F +P +LE+ + ++ +
Sbjct: 218 TREFEQMELEFFCEPD----------TDLEWFAYWKQFCID------------------- 248
Query: 237 NETIGYFIGRVYLFLSRLGIDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIA 296
+L LGI +D +R R H E++ Y+ D E +GW E GIA
Sbjct: 249 -------------WLQTLGIKEDEMRVRDHEKEELSFYSKATSDIEFLFPFGWGELWGIA 295
Query: 297 DRSAYDLRAHTVIN 310
DR+ YDL H ++
Sbjct: 296 DRTDYDLTQHQNVS 309
>sp|Q6HBZ1|SYG_BACHK Glycine--tRNA ligase OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=glyQS PE=3 SV=1
Length = 458
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 134/286 (46%), Gaps = 61/286 (21%)
Query: 24 ASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLREDVRLSLEQAAELRRTLAMMDDL 83
ASGHV D M+ +K +RAD+L++D + K E V +D L
Sbjct: 75 ASGHVGNFNDPMIDCKKCKARHRADKLIEDALDAKGIEMV----------------VDGL 118
Query: 84 SVEELGAKIKEYGITAPD-TKNPLSDPYPFNLMFQT--SVGPSGLTAAYVRPETAPGIFV 140
+ +++ +KE+ + PD + ++ FNLMF+T V S ++RPETA GIFV
Sbjct: 119 TFDQMADLMKEHEVKCPDCSSEEFTEIRQFNLMFKTFQGVTESSTNEIFLRPETAQGIFV 178
Query: 141 NFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFTLAEIEHFVDPKDKSHPKFS 200
NFK++ + KLPF QIG++FRNEI+P R REF E+E F P +
Sbjct: 179 NFKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFTFRTREFEQMELEFFCKPGE------- 231
Query: 201 EVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIGYFIGRVYLFLSRLGIDQDH 260
+LE+ F RE + +L LG+ ++
Sbjct: 232 ---DLEWFAFWRETCKN--------------------------------WLLSLGMTEES 256
Query: 261 LRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAH 306
+R R H E++HY+ D E + +GW E G+A R+ +DL+ H
Sbjct: 257 MRLRDHGEEELSHYSNATTDIEFKFPFGWGELWGVASRTDFDLKRH 302
>sp|Q5KUC1|SYG_GEOKA Glycine--tRNA ligase OS=Geobacillus kaustophilus (strain HTA426)
GN=glyQS PE=3 SV=1
Length = 460
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 130/289 (44%), Gaps = 61/289 (21%)
Query: 21 VLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLREDVRLSLEQAAELRRTLAMM 80
+ASGH+ D MV ++ +RAD+L+ E+A E + ++
Sbjct: 73 TWEASGHLGNFNDPMVDCKQCKARHRADKLI----------------EKALEEKGIEMIV 116
Query: 81 DDLSVEELGAKIKEYGITAPDTKN-PLSDPYPFNLMFQT--SVGPSGLTAAYVRPETAPG 137
D L + ++ IKEY I P+ + ++ FNLMF+T V S Y+RPETA G
Sbjct: 117 DGLPLAKMDELIKEYDIACPECGSRDFTNVRQFNLMFKTYQGVTESSANEIYLRPETAQG 176
Query: 138 IFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFTLAEIEHFVDPKDKSHP 197
IFVNFK++ KLPF AQIG++FRNEI+P R REF E+E F P +
Sbjct: 177 IFVNFKNVQRTMRKKLPFGIAQIGKSFRNEITPGNFTFRTREFEQMELEFFCKPGE---- 232
Query: 198 KFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIGYFIGRVYLFLSRLGID 257
E F +Q +L LG+
Sbjct: 233 --------ELQWFDYWKQFCKD------------------------------WLLSLGMK 254
Query: 258 QDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAH 306
+D++R R H E++HY+ D E +GW E GIA R+ YDL+ H
Sbjct: 255 EDNIRLRDHAKEELSHYSNATTDIEYHFPFGWGELWGIASRTDYDLKRH 303
>sp|Q72PW7|SYG_LEPIC Glycine--tRNA ligase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar copenhageni (strain Fiocruz
L1-130) GN=glyQS PE=3 SV=1
Length = 464
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 139/308 (45%), Gaps = 67/308 (21%)
Query: 4 LKENMLEVRSPCVTPEVVLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLREDV 63
L+E+++ + S + V +ASGHV D ++ + T RAD+ L+D
Sbjct: 62 LREDIVGLDSSILLNPKVWEASGHVSNFNDPLIDCKNCKTRIRADKFLED---------- 111
Query: 64 RLSLEQAAELRRTLAMMDDLSVEELGAKIKEYGITAPDT--KNPLSDPYPFNLMFQTSVG 121
Q E L++E++ IKE P+ + ++ FNLMF+TS G
Sbjct: 112 -----QKGE-----GFATGLTLEKMNQVIKESNFACPNCGQRGTFTEARDFNLMFKTSHG 161
Query: 122 PSGLTA--AYVRPETAPGIFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVRE 179
S + Y+RPETA GIF+NFK++ K+PF AQIG++FRNEI RQ R RE
Sbjct: 162 ASAEDSLDIYLRPETAQGIFLNFKNVVSTTRRKIPFGIAQIGKSFRNEIMARQFVFRTRE 221
Query: 180 FTLAEIEHFVDPKDKSHPKFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNET 239
F E+E F +P E
Sbjct: 222 FEQMEMEFFCEPG------------------------------------------TQKEW 239
Query: 240 IGYFIGRVYLFLS-RLGIDQDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADR 298
+++ +L+ ++GI +++LR R+H E++ Y+ D E + ++GW E GIA R
Sbjct: 240 FSHWVNYCMNWLTEQVGIKKENLRVREHEKEELSFYSEGTSDIEFKYNFGWGELWGIASR 299
Query: 299 SAYDLRAH 306
+ YDL H
Sbjct: 300 TDYDLNQH 307
>sp|Q2YT14|SYG_STAAB Glycine--tRNA ligase OS=Staphylococcus aureus (strain bovine RF122
/ ET3-1) GN=glyQS PE=3 SV=1
Length = 463
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 59/289 (20%)
Query: 21 VLKASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLREDVRLSLEQAAELRRTLAMM 80
V +ASGH+ D M+ ++ + YRAD+L++D+ +DV+ A
Sbjct: 73 VWEASGHLNNFNDPMIDNKDSKIRYRADKLIEDYM-----QDVKGDENFIA--------- 118
Query: 81 DDLSVEELGAKIKEYGITAPDTKNP-LSDPYPFNLMFQT--SVGPSGLTAAYVRPETAPG 137
D LS E++ I + GI P +K ++ FNLMF+T V ++RPETA G
Sbjct: 119 DGLSFEQMKKIIDDEGIVCPVSKTANWTEIRQFNLMFKTFQGVTEDSTNEIFLRPETAQG 178
Query: 138 IFVNFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFTLAEIEHFVDPKDKSHP 197
IFVN+K++ + KLPF QIG++FRNEI+P R REF E+E F P
Sbjct: 179 IFVNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFCKP------ 232
Query: 198 KFSEVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIGYFIGRVYLFLSRLGID 257
GE + E Y+ +L+ L +
Sbjct: 233 -----------------------------GEEI-------EWQNYWKTFASDWLTSLNMS 256
Query: 258 QDHLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAH 306
+++R R H +E++HY+ D E + +GW E GIA R+ +DLR H
Sbjct: 257 SENMRLRDHDEDELSHYSNATTDIEYKFPFGWGELWGIASRTDFDLRKH 305
>sp|Q632E8|SYG_BACCZ Glycine--tRNA ligase OS=Bacillus cereus (strain ZK / E33L) GN=glyQS
PE=3 SV=1
Length = 458
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 134/286 (46%), Gaps = 61/286 (21%)
Query: 24 ASGHVEKLTDQMVKDEKTGTFYRADQLLKDFCNEKLREDVRLSLEQAAELRRTLAMMDDL 83
ASGHV D M+ +K +RAD+L++D + K E V +D L
Sbjct: 75 ASGHVGNFNDPMIDCKKCKARHRADKLIEDALDAKGIEMV----------------VDGL 118
Query: 84 SVEELGAKIKEYGITAPDTKNP-LSDPYPFNLMFQT--SVGPSGLTAAYVRPETAPGIFV 140
+ +++ +KE+ + PD + ++ FNLMF+T V S ++RPETA GIFV
Sbjct: 119 TFDQMADLMKEHEVKCPDCGSEEFTEIRQFNLMFKTFQGVTESSTNEIFLRPETAQGIFV 178
Query: 141 NFKDLYYNNGNKLPFAAAQIGQAFRNEISPRQGFSRVREFTLAEIEHFVDPKDKSHPKFS 200
NFK++ + KLPF QIG++FRNEI+P R REF E+E F P +
Sbjct: 179 NFKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFTFRTREFEQMELEFFCKPGE------- 231
Query: 201 EVKNLEFLMFPREEQMSAQSAKKIRLGEAVSRGIVNNETIGYFIGRVYLFLSRLGIDQDH 260
+LE+ F RE + +L LG+ ++
Sbjct: 232 ---DLEWFAFWRETCKN--------------------------------WLLSLGMTEES 256
Query: 261 LRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAH 306
+R R H E++HY+ D E + +GW E G+A R+ +DL+ H
Sbjct: 257 MRLRDHGEEELSHYSNATTDIEFKFPFGWGELWGVASRTDFDLKRH 302
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,944,277
Number of Sequences: 539616
Number of extensions: 4583712
Number of successful extensions: 13817
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 13243
Number of HSP's gapped (non-prelim): 442
length of query: 310
length of database: 191,569,459
effective HSP length: 117
effective length of query: 193
effective length of database: 128,434,387
effective search space: 24787836691
effective search space used: 24787836691
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)