BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041447
(148 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
G+ GFG VYKG+L G L+AVK L E + ++F EV I H N+++L GF
Sbjct: 39 GRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT 98
Query: 97 GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++R LVY YM NGS+ + W K +ALG+ARG+ YLH+
Sbjct: 99 PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD 149
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
G+ GFG VYKG+L G L+AVK L E ++F EV I H N+++L GF
Sbjct: 47 GRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMT 106
Query: 97 GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++R LVY YM NGS+ + W K +ALG+ARG+ YLH+
Sbjct: 107 PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD 157
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 72.8 bits (177), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 43 FGSVYKGQLHTGGLIAVKM-LENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
FG VYKG L G +A+K S+ EF E+ T+ H ++V L+GF E ++
Sbjct: 52 FGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMI 111
Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
L+Y+YM NG+L RH++ ++ S SWE+ E+ +G ARG+ YLH
Sbjct: 112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT 157
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 72.8 bits (177), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 43 FGSVYKGQLHTGGLIAVKM-LENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
FG VYKG L G +A+K S+ EF E+ T+ H ++V L+GF E ++
Sbjct: 52 FGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMI 111
Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
L+Y+YM NG+L RH++ ++ S SWE+ E+ +G ARG+ YLH
Sbjct: 112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT 157
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQLLGFY 94
G+ GFG VYKG ++ + K+ + + E F E+ + + H N+V+LLGF
Sbjct: 34 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFS 93
Query: 95 SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
S+G LVY YMPNGSL + +G SW ++A G A GI +LH
Sbjct: 94 SDGDDLCLVYVYMPNGSLLDRLSCLDGT-PPLSWHMRCKIAQGAANGINFLH 144
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQLLGFY 94
G+ GFG VYKG ++ + K+ + + E F E+ + + H N+V+LLGF
Sbjct: 40 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFS 99
Query: 95 SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
S+G LVY YMPNGSL + +G SW ++A G A GI +LH
Sbjct: 100 SDGDDLCLVYVYMPNGSLLDRLSCLDGT-PPLSWHMRCKIAQGAANGINFLH 150
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQLLGFY 94
G+ GFG VYKG ++ + K+ + + E F E+ + + H N+V+LLGF
Sbjct: 40 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFS 99
Query: 95 SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
S+G LVY YMPNGSL + +G SW ++A G A GI +LH
Sbjct: 100 SDGDDLCLVYVYMPNGSLLDRLSCLDGT-PPLSWHMRCKIAQGAANGINFLH 150
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQLLGFY 94
G+ GFG VYKG ++ + K+ + + E F E+ + H N+V+LLGF
Sbjct: 31 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFS 90
Query: 95 SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
S+G LVY Y PNGSL + +G SW ++A G A GI +LH
Sbjct: 91 SDGDDLCLVYVYXPNGSLLDRLSCLDGT-PPLSWHXRCKIAQGAANGINFLH 141
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
G FG+VYKG+ H G +AVKML + + + F NEV + + HVN++ +G YS
Sbjct: 33 GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 89
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
+ A+V ++ SL H+ +E + F +KL ++A TARG++YLH
Sbjct: 90 TAPQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLH 137
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
G FG+VYKG+ H G +AVKML + + + F NEV + + HVN++ +G YS
Sbjct: 21 GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 77
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
+ A+V ++ SL H+ +E + F +KL ++A TARG++YLH
Sbjct: 78 TKPQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLH 125
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
G FG+VYKG+ H G +AVKML + + + F NEV + + HVN++ +G YS
Sbjct: 33 GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 89
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
+ A+V ++ SL H+ +E + F +KL ++A TARG++YLH
Sbjct: 90 TKPQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLH 137
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 17 DNPSYEDL--RKLLD-SGLDLTWSS-------GKDGFGSVYKGQLHTGGLIAVKMLENSN 66
D P+ E+L + +D +D+ W G FG+V++ + H G +AVK+L +
Sbjct: 14 DIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQD 72
Query: 67 FSAV---EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRG 123
F A EF+ EV+ + R+ H N+V +G ++ ++V EY+ GSL R + + R
Sbjct: 73 FHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGARE 132
Query: 124 KSFSWEKLHEVALGTARGIEYLHN 147
+ +L +A A+G+ YLHN
Sbjct: 133 QLDERRRL-SMAYDVAKGMNYLHN 155
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 17 DNPSYEDL--RKLLD-SGLDLTWSS-------GKDGFGSVYKGQLHTGGLIAVKMLENSN 66
D P+ E+L + +D +D+ W G FG+V++ + H G +AVK+L +
Sbjct: 14 DIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQD 72
Query: 67 FSAV---EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRG 123
F A EF+ EV+ + R+ H N+V +G ++ ++V EY+ GSL R + + R
Sbjct: 73 FHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGARE 132
Query: 124 KSFSWEKLHEVALGTARGIEYLHN 147
+ +L +A A+G+ YLHN
Sbjct: 133 QLDERRRL-SMAYDVAKGMNYLHN 155
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
G FG+VYKG+ H G +AVKML + + + F NEV + + HVN++ +G YS
Sbjct: 17 GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 73
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
+ A+V ++ SL H+ E + F KL ++A TA+G++YLH
Sbjct: 74 TAPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLH 121
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
G FG+VYKG+ H G +AVKML + + + F NEV + + HVN++ +G YS
Sbjct: 22 GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 78
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
+ A+V ++ SL H+ E + F KL ++A TA+G++YLH
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLH 126
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
G FG+VYKG+ H G +AVKML + + + F NEV + + HVN++ +G YS
Sbjct: 17 GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 73
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
+ A+V ++ SL H+ E + F KL ++A TA+G++YLH
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLH 121
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
G FG+VYKG+ H G +AVKML + + + F NEV + + HVN++ +G YS
Sbjct: 22 GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 78
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
+ A+V ++ SL H+ E + F KL ++A TA+G++YLH
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLH 126
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
G FG+VYKG+ H G +AVKML + + + F NEV + + HVN++ +G YS
Sbjct: 17 GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 73
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
+ A+V ++ SL H+ E + F KL ++A TA+G++YLH
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLH 121
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
G FG+VYKG+ H G +AVKML + + + F NEV + + HVN++ +G YS
Sbjct: 44 GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 100
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
+ A+V ++ SL H+ E + F KL ++A TA+G++YLH
Sbjct: 101 TKPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLH 148
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
G FG+VYKG+ H G +AVKML + + + F NEV + + HVN++ +G YS
Sbjct: 37 GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 93
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
+ A+V ++ SL H+ E + F KL ++A TA+G++YLH
Sbjct: 94 TKPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLH 141
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
G FG+VYKG+ H G +AVKML + + + F NEV + + HVN++ +G YS
Sbjct: 19 GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 75
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
+ A+V ++ SL H+ E + F KL ++A TA+G++YLH
Sbjct: 76 TKPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLH 123
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
G FG+VYKG+ H G +AVKML + + + F NEV + + HVN++ +G YS
Sbjct: 45 GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 101
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
+ A+V ++ SL H+ E + F KL ++A TA+G++YLH
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLH 149
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLLGFYS 95
G FG+VYKG+ H G +AVKML + + + F NEV + + HVN++ +G YS
Sbjct: 45 GSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 101
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
+ A+V ++ SL H+ E + F KL ++A TA+G++YLH
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLH 149
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 67/111 (60%), Gaps = 9/111 (8%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFI---NEVSTIGRIHHVNVVQLLGFYS 95
G FG+VYKG+ H G +AVK+L+ + + +F NEV+ + + HVN++ +G+ +
Sbjct: 45 GSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT 102
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
+ + A+V ++ SL +H+ E + + F +L ++A TA+G++YLH
Sbjct: 103 KDN-LAIVTQWCEGSSLYKHLHVQETKFQMF---QLIDIARQTAQGMDYLH 149
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 39 GKDGFGSVYKGQLHTGG-----LIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLL 91
G FG VYKG L T +A+K L+ + V+F+ E +G+ H N+++L
Sbjct: 53 GAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLE 112
Query: 92 GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G S+ ++ EYM NG+LD+ + +G FS +L + G A G++YL N
Sbjct: 113 GVISKYKPMMIITEYMENGALDKFLREKDG---EFSVLQLVGMLRGIAAGMKYLAN 165
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 43 FGSVYKGQLHTGG----LIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
FG V G+L G +A+K L+ ++ +F++E S +G+ H N++ L G ++
Sbjct: 21 FGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 80
Query: 97 GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ EYM NGSLD + N+GR F+ +L + G G++YL +
Sbjct: 81 CKPVMIITEYMENGSLDAFLRKNDGR---FTVIQLVGMLRGIGSGMKYLSD 128
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 43 FGSVYKGQLHTGG----LIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
FG V G+L G +A+K L+ ++ +F++E S +G+ H N++ L G ++
Sbjct: 42 FGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 101
Query: 97 GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ EYM NGSLD + N+GR F+ +L + G G++YL +
Sbjct: 102 CKPVMIITEYMENGSLDAFLRKNDGR---FTVIQLVGMLRGIGSGMKYLSD 149
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 43 FGSVYKGQLHTGG----LIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
FG V G+L G +A+K L+ ++ +F++E S +G+ H N++ L G ++
Sbjct: 27 FGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 86
Query: 97 GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ EYM NGSLD + N+GR F+ +L + G G++YL +
Sbjct: 87 CKPVMIITEYMENGSLDAFLRKNDGR---FTVIQLVGMLRGIGSGMKYLSD 134
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 39 GKDGFGSVYKGQLHTGG----LIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLG 92
G FG V G L G +A+K L++ + +F++E S +G+ H NV+ L G
Sbjct: 16 GAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEG 75
Query: 93 FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ + ++ E+M NGSLD + N+G+ F+ +L + G A G++YL +
Sbjct: 76 VVTKSTPVMIITEFMENGSLDSFLRQNDGQ---FTVIQLVGMLRGIAAGMKYLAD 127
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 39 GKDGFGSVYKGQLHTGG----LIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLG 92
G FG V G L G +A+K L++ + +F++E S +G+ H NV+ L G
Sbjct: 42 GAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEG 101
Query: 93 FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ + ++ E+M NGSLD + N+G+ F+ +L + G A G++YL +
Sbjct: 102 VVTKSTPVMIITEFMENGSLDSFLRQNDGQ---FTVIQLVGMLRGIAAGMKYLAD 153
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 16 VDNPSYED--------LRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG----LIAVKMLE 63
+D +YED ++L S + + G FG V G+L G +A+K L+
Sbjct: 21 IDPETYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLK 80
Query: 64 --NSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEG 121
+ +F+ E S +G+ H NVV L G + G +V E+M NG+LD + ++G
Sbjct: 81 VGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDG 140
Query: 122 RGKSFSWEKLHEVALGTARGIEYLHN 147
+ F+ +L + G A G+ YL +
Sbjct: 141 Q---FTVIQLVGMLRGIAAGMRYLAD 163
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 39 GKDGFGSVYKGQLHTGG----LIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLG 92
G FG V +G+L G +A+K L+ + EF++E S +G+ H N+++L G
Sbjct: 25 GAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEG 84
Query: 93 FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
+ ++ E+M NG+LD + N+G+ F+ +L + G A G+ YL
Sbjct: 85 VVTNSMPVMILTEFMENGALDSFLRLNDGQ---FTVIQLVGMLRGIASGMRYL 134
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 39 GKDGFGSVYKGQLHTGG----LIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLG 92
G FG V +G+L G +A+K L+ + EF++E S +G+ H N+++L G
Sbjct: 23 GAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEG 82
Query: 93 FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
+ ++ E+M NG+LD + N+G+ F+ +L + G A G+ YL
Sbjct: 83 VVTNSMPVMILTEFMENGALDSFLRLNDGQ---FTVIQLVGMLRGIASGMRYL 132
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 30 SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQ 89
S L G FG V+ G +A+K ++ + S +FI E + ++ H +VQ
Sbjct: 27 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQ 86
Query: 90 LLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG 148
L G E + LV+E+M +G L ++ G F+ E L + L G+ YL
Sbjct: 87 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEEA 142
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 30 SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQ 89
S L G FG V+ G +A+K + S +FI E + ++ H +VQ
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 64
Query: 90 LLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG 148
L G E + LV+E+M +G L ++ G F+ E L + L G+ YL
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEEA 120
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 16 VDNPSY---EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHT------GGLIAVKMLENSN 66
++NP Y + + + L W G+ FG V+ + H L+AVK L+ ++
Sbjct: 24 IENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS 83
Query: 67 FSAVE-FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHI 116
SA + F E + + H ++V+ G +EG +V+EYM +G L+R +
Sbjct: 84 ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 134
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 30 SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQ 89
S L G FG V+ G +A+K + S +FI E + ++ H +VQ
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 90 LLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG 148
L G E + LV+E+M +G L ++ G F+ E L + L G+ YL
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEEA 122
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 30 SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQ 89
S L G FG V+ G +A+K + S +FI E + ++ H +VQ
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 90 LLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG 148
L G E + LV+E+M +G L ++ G F+ E L + L G+ YL
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEEA 122
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 30 SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQ 89
S L G FG V+ G +A+K + S +FI E + ++ H +VQ
Sbjct: 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 69
Query: 90 LLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG 148
L G E + LV+E+M +G L ++ G F+ E L + L G+ YL
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEEA 125
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 39 GKDGFGSVYKGQLHTGG----LIAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
G FG V G+L G +A+K L+ + +F+ E S +G+ H N++ L G
Sbjct: 31 GAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEG 90
Query: 93 FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ +V EYM NGSLD + N+G+ F+ +L + G + G++YL +
Sbjct: 91 VVTKSKPVMIVTEYMENGSLDTFLKKNDGQ---FTVIQLVGMLRGISAGMKYLSD 142
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 15/139 (10%)
Query: 18 NPSYEDLRKLLDSGL--------DLTWSSGKDGFGSVYKG-QLHTGGLIAVKMLE-NSNF 67
NP L+KL + L D+ G+ +GSVYK TG ++A+K + S+
Sbjct: 9 NPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL 68
Query: 68 SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFS 127
E I E+S + + +VV+ G Y + + +V EY GS+ I R K+ +
Sbjct: 69 Q--EIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII---RLRNKTLT 123
Query: 128 WEKLHEVALGTARGIEYLH 146
+++ + T +G+EYLH
Sbjct: 124 EDEIATILQSTLKGLEYLH 142
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 34 LTWSSGKDGFGSVYKGQLHT------GGLIAVKMLENSNFSAVE-FINEVSTIGRIHHVN 86
L W G+ FG V+ + H L+AVK L+ ++ SA + F E + + H +
Sbjct: 22 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHI 116
+V+ G +EG +V+EYM +G L+R +
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 111
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 34 LTWSSGKDGFGSVYKGQLHT------GGLIAVKMLENSNFSAVE-FINEVSTIGRIHHVN 86
L W G+ FG V+ + H L+AVK L+ ++ SA + F E + + H +
Sbjct: 16 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHI 116
+V+ G +EG +V+EYM +G L+R +
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 105
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 33 DLTWSS--GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQL 90
DLT+ G FG V G+ +A+KM++ + S EFI E + + H +VQL
Sbjct: 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 64
Query: 91 LGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G ++ ++ EYM NG L ++ E R + F ++L E+ +EYL +
Sbjct: 65 YGVCTKQRPIFIITEYMANGCLLNYL--REMRHR-FQTQQLLEMCKDVCEAMEYLES 118
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 32 LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLL 91
L L + GK FG V G + G +AVK ++N + +A F+ E S + ++ H N+VQLL
Sbjct: 8 LKLLQTIGKGEFGDVMLGD-YRGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLL 65
Query: 92 G-FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS-FSWEKLHEVALGTARGIEYLH 146
G E +V EYM GSL ++ RG+S + L + +L +EYL
Sbjct: 66 GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE 119
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
G FG V G+ +A+KM++ + S EFI E + + H +VQL G ++
Sbjct: 18 GTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR 77
Query: 99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ EYM NG L ++ E R + F ++L E+ +EYL +
Sbjct: 78 PIFIITEYMANGCLLNYL--REMRHR-FQTQQLLEMCKDVCEAMEYLES 123
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 32 LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLL 91
L L + GK FG V G + G +AVK ++N + +A F+ E S + ++ H N+VQLL
Sbjct: 14 LKLLQTIGKGEFGDVMLGD-YRGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLL 71
Query: 92 G-FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS-FSWEKLHEVALGTARGIEYLH 146
G E +V EYM GSL ++ RG+S + L + +L +EYL
Sbjct: 72 GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE 125
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
G FG V G+ +A+KM++ + S EFI E + + H +VQL G ++
Sbjct: 17 GTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR 76
Query: 99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ EYM NG L ++ E R + F ++L E+ +EYL +
Sbjct: 77 PIFIITEYMANGCLLNYL--REMRHR-FQTQQLLEMCKDVCEAMEYLES 122
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 33 DLTWSS--GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQL 90
DLT+ G FG V G+ +A+KM++ + S EFI E + + H +VQL
Sbjct: 10 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 91 LGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G ++ ++ EYM NG L ++ E R + F ++L E+ +EYL +
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYL--REMRHR-FQTQQLLEMCKDVCEAMEYLES 123
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 32 LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLL 91
L L + GK FG V G + G +AVK ++N + +A F+ E S + ++ H N+VQLL
Sbjct: 23 LKLLQTIGKGEFGDVMLGD-YRGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLL 80
Query: 92 G-FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS-FSWEKLHEVALGTARGIEYLH 146
G E +V EYM GSL ++ RG+S + L + +L +EYL
Sbjct: 81 GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE 134
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
G FG V G+ +A+KM++ + S EFI E + + H +VQL G ++
Sbjct: 33 GTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR 92
Query: 99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ EYM NG L ++ E R + F ++L E+ +EYL +
Sbjct: 93 PIFIITEYMANGCLLNYL--REMRHR-FQTQQLLEMCKDVCEAMEYLES 138
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 33 DLTWSS--GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQL 90
DLT+ G FG V G+ +A+KM++ + S EFI E + + H +VQL
Sbjct: 16 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 75
Query: 91 LGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G ++ ++ EYM NG L ++ E R + F ++L E+ +EYL +
Sbjct: 76 YGVCTKQRPIFIITEYMANGCLLNYL--REMRHR-FQTQQLLEMCKDVCEAMEYLES 129
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
G FG V G+ +A+KM++ + S EFI E + + H +VQL G ++
Sbjct: 33 GTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR 92
Query: 99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ EYM NG L ++ E R + F ++L E+ +EYL +
Sbjct: 93 PIFIITEYMANGCLLNYL--REMRHR-FQTQQLLEMCKDVCEAMEYLES 138
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query: 20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
S DL+++ + L G FG VY+GQ+ + +AVK L S ++
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 72 FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
F+ E I +++H N+V+ +G + R ++ E M G L R P + S +
Sbjct: 95 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 129 EKLHEVALGTARGIEYLH 146
L VA A G +YL
Sbjct: 155 LDLLHVARDIACGCQYLE 172
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query: 20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
S DL+++ + L G FG VY+GQ+ + +AVK L S ++
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 72 FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
F+ E I +++H N+V+ +G + R ++ E M G L R P + S +
Sbjct: 81 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 129 EKLHEVALGTARGIEYLH 146
L VA A G +YL
Sbjct: 141 LDLLHVARDIACGCQYLE 158
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 20 SYEDLRKLLDSG--LDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE-FINE 75
YE +R+ LD ++ G FG VYK + TG L A K++E + +E +I E
Sbjct: 7 EYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVE 66
Query: 76 VSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD 113
+ + H +V+LLG Y K ++ E+ P G++D
Sbjct: 67 IEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVD 104
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 49.3 bits (116), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 32 LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLL 91
L L + GK FG V G + G +AVK ++N + +A F+ E S + ++ H N+VQLL
Sbjct: 195 LKLLQTIGKGEFGDVMLGD-YRGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLL 252
Query: 92 G-FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS-FSWEKLHEVALGTARGIEYL 145
G E +V EYM GSL ++ RG+S + L + +L +EYL
Sbjct: 253 GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL 305
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
S DL+++ + L G FG VY+GQ+ + +AVK L S ++
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 72 FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
F+ E I + +H N+V+ +G + R ++ E M G L R P + S +
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 129 EKLHEVALGTARGIEYLH 146
L VA A G +YL
Sbjct: 140 LDLLHVARDIACGCQYLE 157
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
S DL+++ + L G FG VY+GQ+ + +AVK L S ++
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 72 FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
F+ E I + +H N+V+ +G + R ++ E M G L R P + S +
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 129 EKLHEVALGTARGIEYLH 146
L VA A G +YL
Sbjct: 140 LDLLHVARDIACGCQYLE 157
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
S DL+++ + L G FG VY+GQ+ + +AVK L S ++
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 71
Query: 72 FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
F+ E I + +H N+V+ +G + R ++ E M G L R P + S +
Sbjct: 72 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 131
Query: 129 EKLHEVALGTARGIEYLH 146
L VA A G +YL
Sbjct: 132 LDLLHVARDIACGCQYLE 149
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
+D+ ++ L L G FG V+ G + +A+K L+ S F+ E + +
Sbjct: 1 KDVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKK 60
Query: 82 IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
+ H +VQL SE +V EYM GSL F +G G++ L ++A A G
Sbjct: 61 LKHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLD--FLKDGEGRALKLPNLVDMAAQVAAG 117
Query: 142 IEYLH 146
+ Y+
Sbjct: 118 MAYIE 122
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Query: 30 SGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQ 89
S L G FG V+ G +A+K + S +FI E + ++ H +VQ
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 67
Query: 90 LLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG 148
L G E + LV E+M +G L ++ G F+ E L + L G+ YL
Sbjct: 68 LYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEEA 123
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
S DL+++ + L G FG VY+GQ+ + +AVK L S ++
Sbjct: 37 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 96
Query: 72 FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
F+ E I + +H N+V+ +G + R ++ E M G L R P + S +
Sbjct: 97 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 156
Query: 129 EKLHEVALGTARGIEYLH 146
L VA A G +YL
Sbjct: 157 LDLLHVARDIACGCQYLE 174
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
S DL+++ + L G FG VY+GQ+ + +AVK L S ++
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 72 FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
F+ E I + +H N+V+ +G + R ++ E M G L R P + S +
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 129 EKLHEVALGTARGIEYLH 146
L VA A G +YL
Sbjct: 141 LDLLHVARDIACGCQYLE 158
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
S DL+++ + L G FG VY+GQ+ + +AVK L S ++
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 72 FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
F+ E I + +H N+V+ +G + R ++ E M G L R P + S +
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 129 EKLHEVALGTARGIEYLH 146
L VA A G +YL
Sbjct: 155 LDLLHVARDIACGCQYLE 172
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
S DL+++ + L G FG VY+GQ+ + +AVK L S ++
Sbjct: 27 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 86
Query: 72 FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
F+ E I + +H N+V+ +G + R ++ E M G L R P + S +
Sbjct: 87 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 146
Query: 129 EKLHEVALGTARGIEYLH 146
L VA A G +YL
Sbjct: 147 LDLLHVARDIACGCQYLE 164
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
S DL+++ + L G FG VY+GQ+ + +AVK L S ++
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 72 FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
F+ E I + +H N+V+ +G + R ++ E M G L R P + S +
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 129 EKLHEVALGTARGIEYLH 146
L VA A G +YL
Sbjct: 141 LDLLHVARDIACGCQYLE 158
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
S DL+++ + L G FG VY+GQ+ + +AVK L S ++
Sbjct: 38 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 97
Query: 72 FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
F+ E I + +H N+V+ +G + R ++ E M G L R P + S +
Sbjct: 98 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 157
Query: 129 EKLHEVALGTARGIEYLH 146
L VA A G +YL
Sbjct: 158 LDLLHVARDIACGCQYLE 175
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
S DL+++ + L G FG VY+GQ+ + +AVK L S ++
Sbjct: 61 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 120
Query: 72 FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
F+ E I + +H N+V+ +G + R ++ E M G L R P + S +
Sbjct: 121 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 180
Query: 129 EKLHEVALGTARGIEYLH 146
L VA A G +YL
Sbjct: 181 LDLLHVARDIACGCQYLE 198
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
S DL+++ + L G FG VY+GQ+ + +AVK L S ++
Sbjct: 47 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 106
Query: 72 FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
F+ E I + +H N+V+ +G + R ++ E M G L R P + S +
Sbjct: 107 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 166
Query: 129 EKLHEVALGTARGIEYLH 146
L VA A G +YL
Sbjct: 167 LDLLHVARDIACGCQYLE 184
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQL------HTGGLIAVKMLEN--SNFSAVE 71
S DL+++ + L G FG VY+GQ+ + +AVK L S ++
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD 94
Query: 72 FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSW 128
F+ E I + +H N+V+ +G + R ++ E M G L R P + S +
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 129 EKLHEVALGTARGIEYLH 146
L VA A G +YL
Sbjct: 155 LDLLHVARDIACGCQYLE 172
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 44 GSVYKGQLHTGGL----IAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG 97
G V G+L G +A+K L+ + +F++E S +G+ H N+++L G + G
Sbjct: 63 GEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG 122
Query: 98 SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+V EYM NGSLD + ++G+ F+ +L + G G+ YL +
Sbjct: 123 RLAMIVTEYMENGSLDTFLRTHDGQ---FTIMQLVGMLRGVGAGMRYLSD 169
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 44 GSVYKGQLHTGGL----IAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG 97
G V G+L G +A+K L+ + +F++E S +G+ H N+++L G + G
Sbjct: 63 GEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG 122
Query: 98 SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+V EYM NGSLD + ++G+ F+ +L + G G+ YL +
Sbjct: 123 RLAMIVTEYMENGSLDTFLRTHDGQ---FTIMQLVGMLRGVGAGMRYLSD 169
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43 FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
+G VY G L +AVK L+ EF+ E + + I H N+VQLLG +
Sbjct: 45 YGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFY 104
Query: 102 LVYEYMPNGSL 112
+V EYMP G+L
Sbjct: 105 IVTEYMPYGNL 115
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 12 LNRSVDNPSYED--------LRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL----IAV 59
L VD +YED ++L + + + G FG V G+L +A+
Sbjct: 19 LRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 60 KMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIF 117
K L+ + +F+ E S +G+ H N+++L G ++ +V EYM NGSLD +
Sbjct: 79 KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 118 PNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ + F+ +L + G A G++YL +
Sbjct: 139 KHDAQ---FTVIQLVGMLRGIASGMKYLSD 165
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 12 LNRSVDNPSYED--------LRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL----IAV 59
L VD +YED ++L + + + G FG V G+L +A+
Sbjct: 17 LRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 76
Query: 60 KMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIF 117
K L+ + +F+ E S +G+ H N+++L G ++ +V EYM NGSLD +
Sbjct: 77 KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 136
Query: 118 PNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ + F+ +L + G A G++YL +
Sbjct: 137 KHDAQ---FTVIQLVGMLRGIASGMKYLSD 163
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 16 VDNPSYED--------LRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL----IAVKMLE 63
VD +YED ++L + + + G FG V G+L +A+K L+
Sbjct: 23 VDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 64 --NSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEG 121
+ +F+ E S +G+ H N+++L G ++ +V EYM NGSLD + ++
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142
Query: 122 RGKSFSWEKLHEVALGTARGIEYLHN 147
+ F+ +L + G A G++YL +
Sbjct: 143 Q---FTVIQLVGMLRGIASGMKYLSD 165
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 39 GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE-FINEVSTIGRIHHVNVVQLLGFYSE 96
G FG VYK + TG L A K++E + +E +I E+ + H +V+LLG Y
Sbjct: 20 GDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH 79
Query: 97 GSKRALVYEYMPNGSLD 113
K ++ E+ P G++D
Sbjct: 80 DGKLWIMIEFCPGGAVD 96
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 24 LRKLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKML-------ENSNFSAV-EFIN 74
L L D+ ++ GK GFG V+KG+L ++A+K L E EF
Sbjct: 13 LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR 72
Query: 75 EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
EV + ++H N+V+L G + +V E++P G L + + W +
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRL 127
Query: 135 ALGTARGIEYLHN 147
L A GIEY+ N
Sbjct: 128 MLDIALGIEYMQN 140
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 24 LRKLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKML-------ENSNFSAV-EFIN 74
L L D+ ++ GK GFG V+KG+L ++A+K L E EF
Sbjct: 13 LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR 72
Query: 75 EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
EV + ++H N+V+L G + +V E++P G L + + W +
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRL 127
Query: 135 ALGTARGIEYLHN 147
L A GIEY+ N
Sbjct: 128 MLDIALGIEYMQN 140
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 24 LRKLLDSGLDLTWSSGKDGFGSVYKGQL-HTGGLIAVKML-------ENSNFSAV-EFIN 74
L L D+ ++ GK GFG V+KG+L ++A+K L E EF
Sbjct: 13 LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR 72
Query: 75 EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
EV + ++H N+V+L G + +V E++P G L + + W +
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRL 127
Query: 135 ALGTARGIEYLHN 147
L A GIEY+ N
Sbjct: 128 MLDIALGIEYMQN 140
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 39 GKDGFGSVYKGQLHTGGL----IAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
G FG V G+L +A+K L+ + +F+ E S +G+ H N+++L G
Sbjct: 25 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 84
Query: 93 FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ +V EYM NGSLD + ++ + F+ +L + G A G++YL +
Sbjct: 85 VVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSD 136
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 39 GKDGFGSVYKGQLHTGGL----IAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
G FG V G+L +A+K L+ + +F+ E S +G+ H N+++L G
Sbjct: 42 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 101
Query: 93 FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ +V EYM NGSLD + ++ + F+ +L + G A G++YL +
Sbjct: 102 VVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSD 153
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 39 GKDGFGSVYKGQLHTGGL----IAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
G FG V G+L +A+K L+ + +F+ E S +G+ H N+++L G
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 93 FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ +V EYM NGSLD + ++ + F+ +L + G A G++YL +
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSD 165
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 39 GKDGFGSVYKGQLHTGGL----IAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
G FG V G+L +A+K L+ + +F+ E S +G+ H N+++L G
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 93 FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ +V EYM NGSLD + ++ + F+ +L + G A G++YL +
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSD 165
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 39 GKDGFGSVYKGQLHTGGL----IAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
G FG V G+L +A+K L+ + +F+ E S +G+ H N+++L G
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 93 FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ +V EYM NGSLD + ++ + F+ +L + G A G++YL +
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSD 165
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 39 GKDGFGSVYKGQLHTGGL----IAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
G FG V G+L +A+K L+ + +F+ E S +G+ H N+++L G
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 93 FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ +V EYM NGSLD + ++ + F+ +L + G A G++YL +
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSD 165
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 39 GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFINEVSTIGRIH----HVNVVQLLGF 93
GK F VY+ + +HTG +A+KM++ + V +IH H ++++L +
Sbjct: 20 GKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNY 79
Query: 94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ + + LV E NG ++R++ + R K FS + G+ YLH+
Sbjct: 80 FEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQIITGMLYLHS 130
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 43 FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
FG VY+G L +AVK L+ EF+ E + + I H N+VQLLG +
Sbjct: 24 FGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 83
Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ E+M G+L ++ E + S L +A + +EYL
Sbjct: 84 IITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEK 127
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 39 GKDGFGSVYKGQLHTGGL----IAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
G FG V G+L +A+K L+ + +F+ E S +G+ H N+++L G
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 93 FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ +V EYM NGSLD + ++ + F+ +L + G A G++YL +
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSD 165
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
G FG V G+ +AVKM++ + S EF E T+ ++ H +V+ G S+
Sbjct: 17 GSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY 76
Query: 99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+V EY+ NG L ++ GK +L E+ G+ +L +
Sbjct: 77 PIYIVTEYISNGCLLNYL---RSHGKGLEPSQLLEMCYDVCEGMAFLES 122
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 45.8 bits (107), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
G+ FG V+ G + +A+K L+ N S F+ E + ++ H +VQL SE
Sbjct: 194 GQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 252
Query: 99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
+V EYM GSL F GK +L ++A A G+ Y+
Sbjct: 253 PIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYV 297
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
+D ++ L L G+ FG V+ G + +A+K L+ S F+ E + +
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 82 IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
I H +VQL SE +V EYM GSL F GK +L ++A A G
Sbjct: 70 IRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 142 IEYLHN 147
+ Y+
Sbjct: 127 MAYVER 132
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
G+ FG V+ G + +A+K L+ S F+ E + ++ H +VQL SE
Sbjct: 17 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 75
Query: 99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+V EYM GSL F GK +L ++A A G+ Y+
Sbjct: 76 PIXIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 122
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 18 NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEV 76
+P+Y D ++ + + + G +G VY+G L +AVK L+ EF+ E
Sbjct: 4 DPNY-DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 62
Query: 77 STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
+ + I H N+VQLLG + ++ E+M G+L
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 98
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 43 FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
+G VY+G L +AVK L+ EF+ E + + I H N+VQLLG +
Sbjct: 24 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 83
Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ E+M G+L ++ E + S L +A + +EYL
Sbjct: 84 IIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEK 127
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 43 FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
+G VY+G L +AVK L+ EF+ E + + I H N+VQLLG +
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85
Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ E+M G+L ++ E + S L +A + +EYL
Sbjct: 86 IIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEK 129
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 43 FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
+G VY+G L +AVK L+ EF+ E + + I H N+VQLLG +
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85
Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ E+M G+L ++ E + S L +A + +EYL
Sbjct: 86 IIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEK 129
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 43 FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
+G VY+G L +AVK L+ EF+ E + + I H N+VQLLG +
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85
Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ E+M G+L ++ E + S L +A + +EYL
Sbjct: 86 IITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEK 129
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 43 FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
+G VY+G L +AVK L+ EF+ E + + I H N+VQLLG +
Sbjct: 24 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 83
Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ E+M G+L ++ E + S L +A + +EYL
Sbjct: 84 IITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEK 127
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 43 FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
+G VY+G L +AVK L+ EF+ E + + I H N+VQLLG +
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 90
Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ E+M G+L ++ E + S L +A + +EYL
Sbjct: 91 IITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEK 134
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 43 FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
+G VY+G L +AVK L+ EF+ E + + I H N+VQLLG +
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85
Query: 102 LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ E+M G+L ++ E + S L +A + +EYL
Sbjct: 86 IITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEK 129
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43 FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
+G VY+G L +AVK L+ EF+ E + + I H N+VQLLG +
Sbjct: 27 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 86
Query: 102 LVYEYMPNGSL 112
++ E+M G+L
Sbjct: 87 IIIEFMTYGNL 97
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43 FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
+G VY+G L +AVK L+ EF+ E + + I H N+VQLLG +
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 90
Query: 102 LVYEYMPNGSL 112
++ E+M G+L
Sbjct: 91 IIIEFMTYGNL 101
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43 FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
+G VY+G L +AVK L+ EF+ E + + I H N+VQLLG +
Sbjct: 27 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 86
Query: 102 LVYEYMPNGSL 112
++ E+M G+L
Sbjct: 87 IITEFMTYGNL 97
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
+D ++ L L G+ FG V+ G + +A+K L+ S F+ E + +
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 82 IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
+ H +VQL SE +V EYM GSL F GK +L ++A A G
Sbjct: 70 LRHEKLVQLYAVVSE-EPIYIVCEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 142 IEYLHN 147
+ Y+
Sbjct: 127 MAYVER 132
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
+D ++ L L G+ FG V+ G + +A+K L+ S F+ E + +
Sbjct: 1 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 60
Query: 82 IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
+ H +VQL SE +V EYM GSL F GK +L ++A A G
Sbjct: 61 LRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASG 117
Query: 142 IEYLHN 147
+ Y+
Sbjct: 118 MAYVER 123
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43 FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
+G VY+G L +AVK L+ EF+ E + + I H N+VQLLG +
Sbjct: 28 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 87
Query: 102 LVYEYMPNGSL 112
++ E+M G+L
Sbjct: 88 IITEFMTYGNL 98
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43 FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
+G VY+G L +AVK L+ EF+ E + + I H N+VQLLG +
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 90
Query: 102 LVYEYMPNGSL 112
++ E+M G+L
Sbjct: 91 IITEFMTYGNL 101
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43 FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
+G VY+G L +AVK L+ EF+ E + + I H N+VQLLG +
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 90
Query: 102 LVYEYMPNGSL 112
++ E+M G+L
Sbjct: 91 IITEFMTYGNL 101
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 18 NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEV 76
+P+Y D ++ + + + G +G VY+G L +AVK L+ EF+ E
Sbjct: 2 SPNY-DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 60
Query: 77 STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
+ + I H N+VQLLG + ++ E+M G+L
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43 FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
+G VY+G L +AVK L+ EF+ E + + I H N+VQLLG +
Sbjct: 30 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 89
Query: 102 LVYEYMPNGSL 112
++ E+M G+L
Sbjct: 90 IITEFMTYGNL 100
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43 FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
+G VY+G L +AVK L+ EF+ E + + I H N+VQLLG +
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85
Query: 102 LVYEYMPNGSL 112
++ E+M G+L
Sbjct: 86 IITEFMTYGNL 96
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
+D ++ L L G+ FG V+ G + +A+K L+ S F+ E + +
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 82 IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
+ H +VQL SE +V EYM GSL F GK +L ++A A G
Sbjct: 70 LRHEKLVQLYAVVSE-EPIYIVIEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 142 IEYLHN 147
+ Y+
Sbjct: 127 MAYVER 132
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
+D ++ L L G+ FG V+ G + +A+K L+ S F+ E + +
Sbjct: 3 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 62
Query: 82 IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
+ H +VQL SE +V EYM GSL F GK +L ++A A G
Sbjct: 63 LRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASG 119
Query: 142 IEYLHN 147
+ Y+
Sbjct: 120 MAYVER 125
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 18 NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEV 76
+P+Y D ++ + + + G +G VY+G L +AVK L+ EF+ E
Sbjct: 4 SPNY-DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 62
Query: 77 STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
+ + I H N+VQLLG + ++ E+M G+L
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 98
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 18 NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEV 76
+P+Y D ++ + + + G +G VY+G L +AVK L+ EF+ E
Sbjct: 15 SPNY-DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 73
Query: 77 STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
+ + I H N+VQLLG + ++ E+M G+L
Sbjct: 74 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 109
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
+D ++ L L G+ FG V+ G + +A+K L+ S F+ E + +
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 82 IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
+ H +VQL SE +V EYM GSL F GK +L ++A A G
Sbjct: 70 LRHEKLVQLYAVVSE-EPIYIVIEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 142 IEYLHN 147
+ Y+
Sbjct: 127 MAYVER 132
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43 FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA 101
+G VY+G L +AVK L+ EF+ E + + I H N+VQLLG +
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 90
Query: 102 LVYEYMPNGSL 112
++ E+M G+L
Sbjct: 91 IITEFMTYGNL 101
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 17/150 (11%)
Query: 12 LNRSVDNPSYED--------LRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL----IAV 59
L VD +YED ++L + + + G FG V G+L +A+
Sbjct: 19 LRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 60 KMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIF 117
K L+ + +F+ E S +G+ H N+++L G ++ +V E M NGSLD +
Sbjct: 79 KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR 138
Query: 118 PNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ + F+ +L + G A G++YL +
Sbjct: 139 KHDAQ---FTVIQLVGMLRGIASGMKYLSD 165
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
+D ++ L L G+ FG V+ G + +A+K L+ S F+ E + +
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 82 IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
+ H +VQL SE +V EYM GSL F GK +L ++A A G
Sbjct: 70 LRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 142 IEYLHN 147
+ Y+
Sbjct: 127 MAYVER 132
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
G+ FG V+ G + +A+K L+ S F+ E + ++ H +VQL SE
Sbjct: 16 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 74
Query: 99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+V EYM GSL F GK +L ++A A G+ Y+
Sbjct: 75 PIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 121
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
+D ++ L L G+ FG V+ G + +A+K L+ S F+ E + +
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 82 IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
+ H +VQL SE +V EYM GSL F GK +L ++A A G
Sbjct: 70 LRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 142 IEYLHN 147
+ Y+
Sbjct: 127 MAYVER 132
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 39 GKDGFGSVYKGQL------HTGGLIAVKMLENSNFSAV--EFINEVSTIGRIHHVNVVQL 90
G+D FG VYKG L +A+K L++ + EF +E R+ H NVV L
Sbjct: 35 GEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCL 94
Query: 91 LGFYSEGSKRALVYEYMPNGSL 112
LG ++ ++++ Y +G L
Sbjct: 95 LGVVTKDQPLSMIFSYCSHGDL 116
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 18 NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEV 76
+P+Y D ++ + + + G +G VY+G L +AVK L+ EF+ E
Sbjct: 248 SPNY-DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 306
Query: 77 STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
+ + I H N+VQLLG + ++ E+M G+L
Sbjct: 307 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 342
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 18 NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEV 76
+P+Y D ++ + + + G +G VY+G L +AVK L+ EF+ E
Sbjct: 206 SPNY-DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 264
Query: 77 STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
+ + I H N+VQLLG + ++ E+M G+L
Sbjct: 265 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 300
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 39 GKDGFGSVYKGQL------HTGGLIAVKMLENSNFSAV--EFINEVSTIGRIHHVNVVQL 90
G+D FG VYKG L +A+K L++ + EF +E R+ H NVV L
Sbjct: 18 GEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCL 77
Query: 91 LGFYSEGSKRALVYEYMPNGSL 112
LG ++ ++++ Y +G L
Sbjct: 78 LGVVTKDQPLSMIFSYCSHGDL 99
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 18 NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSNFSAVEFINEV 76
+P+Y D ++ + + + G +G VY+G L +AVK L+ EF+ E
Sbjct: 209 SPNY-DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 267
Query: 77 STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
+ + I H N+VQLLG + ++ E+M G+L
Sbjct: 268 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 303
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 39 GKDGFGSVYKGQLHTGGL----IAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
G FG V G+L +A+K L+ + +F+ E S +G+ H N+++L G
Sbjct: 25 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 84
Query: 93 FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ +V E M NGSLD + ++ + F+ +L + G A G++YL +
Sbjct: 85 VVTKSKPVMIVTEXMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSD 136
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 18 NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVS 77
P +ED ++ L L G FG V+ G + +AVK L+ + S F+ E +
Sbjct: 2 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN 61
Query: 78 TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
+ ++ H +V+L ++ ++ EYM NGSL F G + KL ++A
Sbjct: 62 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQ 118
Query: 138 TARGIEYLH 146
A G+ ++
Sbjct: 119 IAEGMAFIE 127
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 18 NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVS 77
P +ED ++ L L G FG V+ G + +AVK L+ + S F+ E +
Sbjct: 3 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN 62
Query: 78 TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
+ ++ H +V+L ++ ++ EYM NGSL F G + KL ++A
Sbjct: 63 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQ 119
Query: 138 TARGIEYLH 146
A G+ ++
Sbjct: 120 IAEGMAFIE 128
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 43.5 bits (101), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
G+ FG V+ G + +A+K L+ S F+ E + ++ H +VQL SE
Sbjct: 193 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 251
Query: 99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
+V EYM GSL F GK +L ++A A G+ Y+
Sbjct: 252 PIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYV 296
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 18 NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVS 77
P +ED ++ L L G FG V+ G + +AVK L+ + S F+ E +
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN 60
Query: 78 TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
+ ++ H +V+L ++ ++ EYM NGSL F G + KL ++A
Sbjct: 61 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQ 117
Query: 138 TARGIEYLH 146
A G+ ++
Sbjct: 118 IAEGMAFIE 126
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 43.5 bits (101), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
G+ FG V+ G + +A+K L+ S F+ E + ++ H +VQL SE
Sbjct: 193 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 251
Query: 99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
+V EYM GSL F GK +L ++A A G+ Y+
Sbjct: 252 PIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYV 296
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 18 NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVS 77
P +ED ++ L L G FG V+ G + +AVK L+ + S F+ E +
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN 60
Query: 78 TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
+ ++ H +V+L ++ ++ EYM NGSL F G + KL ++A
Sbjct: 61 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQ 117
Query: 138 TARGIEYLH 146
A G+ ++
Sbjct: 118 IAEGMAFIE 126
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
+D ++ L L G+ FG V+ G + +A+K L+ S F+ E + +
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 82 IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
+ H +VQL SE +V EYM G L F GK +L ++A A G
Sbjct: 70 LRHEKLVQLYAVVSE-EPIYIVMEYMSKGCL--LDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 142 IEYLHN 147
+ Y+
Sbjct: 127 MAYVER 132
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 13 NRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEF 72
+ P +ED ++ L L G FG V+ G + +AVK L+ + S F
Sbjct: 2 TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF 61
Query: 73 INEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLH 132
+ E + + ++ H +V+L ++ ++ EYM NGSL F G + KL
Sbjct: 62 LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLL 118
Query: 133 EVALGTARGIEYLH 146
++A A G+ ++
Sbjct: 119 DMAAQIAEGMAFIE 132
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 13 NRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEF 72
+ P +ED ++ L L G FG V+ G + +AVK L+ + S F
Sbjct: 1 TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF 60
Query: 73 INEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLH 132
+ E + + ++ H +V+L ++ ++ EYM NGSL F G + KL
Sbjct: 61 LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLL 117
Query: 133 EVALGTARGIEYLH 146
++A A G+ ++
Sbjct: 118 DMAAQIAEGMAFIE 131
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 43.5 bits (101), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
G+ FG V+ G + +A+K L+ S F+ E + ++ H +VQL SE
Sbjct: 276 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 334
Query: 99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
+V EYM GSL F GK +L ++A A G+ Y+
Sbjct: 335 PIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYV 379
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 13 NRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEF 72
+ P +ED ++ L L G FG V+ G + +AVK L+ + S F
Sbjct: 2 TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF 61
Query: 73 INEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLH 132
+ E + + ++ H +V+L ++ ++ EYM NGSL F G + KL
Sbjct: 62 LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLL 118
Query: 133 EVALGTARGIEYLH 146
++A A G+ ++
Sbjct: 119 DMAAQIAEGMAFIE 132
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 18 NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVS 77
P +ED ++ L L G FG V+ G + +AVK L+ + S F+ E +
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN 60
Query: 78 TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
+ ++ H +V+L ++ ++ EYM NGSL F G + KL ++A
Sbjct: 61 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQ 117
Query: 138 TARGIEYLH 146
A G+ ++
Sbjct: 118 IAEGMAFIE 126
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 39 GKDGFGSVYKGQLHTGGL----IAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLG 92
G FG V G+L +A+K L+ + +F+ E S +G+ H N+++L G
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 93 FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ +V E M NGSLD + ++ + F+ +L + G A G++YL +
Sbjct: 114 VVTKSKPVMIVTEXMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSD 165
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 18 NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVS 77
P +ED ++ L L G FG V+ G + +AVK L+ + S F+ E +
Sbjct: 10 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN 69
Query: 78 TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
+ ++ H +V+L ++ ++ EYM NGSL F G + KL ++A
Sbjct: 70 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQ 126
Query: 138 TARGIEYLH 146
A G+ ++
Sbjct: 127 IAEGMAFIE 135
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 13 NRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEF 72
+ P +ED ++ L L G FG V+ G + +AVK L+ + S F
Sbjct: 4 TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF 63
Query: 73 INEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLH 132
+ E + + ++ H +V+L ++ ++ EYM NGSL F G + KL
Sbjct: 64 LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLL 120
Query: 133 EVALGTARGIEYLH 146
++A A G+ ++
Sbjct: 121 DMAAQIAEGMAFIE 134
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 13 NRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEF 72
+ P +ED ++ L L G FG V+ G + +AVK L+ + S F
Sbjct: 6 TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF 65
Query: 73 INEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLH 132
+ E + + ++ H +V+L ++ ++ EYM NGSL F G + KL
Sbjct: 66 LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLL 122
Query: 133 EVALGTARGIEYLH 146
++A A G+ ++
Sbjct: 123 DMAAQIAEGMAFIE 136
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
+D ++ L L G+ FG V+ G + +A+K L+ S F+ E + +
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 82 IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
+ H +VQL SE +V EYM G L F GK +L ++A A G
Sbjct: 70 LRHEKLVQLYAVVSE-EPIYIVTEYMSKGCL--LDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 142 IEYLHN 147
+ Y+
Sbjct: 127 MAYVER 132
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 42.7 bits (99), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
G+ FG V+ G + +A+K L+ S F+ E + ++ H +VQL SE
Sbjct: 193 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 251
Query: 99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
+V EYM GSL F GK +L ++A A G+ Y+
Sbjct: 252 PIYIVGEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYV 296
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 2/129 (1%)
Query: 18 NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVS 77
P +D ++ + L G FG V+ G + +AVK L+ S F+ E +
Sbjct: 1 KPWDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEAN 60
Query: 78 TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
+ + H +V+L + ++ EYM GSL + +EG GK KL + +
Sbjct: 61 LMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEG-GKVL-LPKLIDFSAQ 118
Query: 138 TARGIEYLH 146
A G+ Y+
Sbjct: 119 IAEGMAYIE 127
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
+D ++ L L G+ FG V+ G + +A+K L+ S F+ E + +
Sbjct: 7 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 66
Query: 82 IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
+ H +VQL SE +V EYM GSL F GK +L +++ A G
Sbjct: 67 LRHEKLVQLYAVVSE-EPIYIVTEYMNKGSL--LDFLKGETGKYLRLPQLVDMSAQIASG 123
Query: 142 IEYLHN 147
+ Y+
Sbjct: 124 MAYVER 129
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGR 81
+D ++ L L G+ FG V+ G + +A+K L+ S F+ E + +
Sbjct: 7 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 66
Query: 82 IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
+ H +VQL SE +V EYM GSL F GK +L +++ A G
Sbjct: 67 LRHEKLVQLYAVVSE-EPIYIVTEYMNKGSL--LDFLKGETGKYLRLPQLVDMSAQIASG 123
Query: 142 IEYLHN 147
+ Y+
Sbjct: 124 MAYVER 129
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 18 NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVS 77
+P++E R+ + L G FG V+ G + +AVK L+ S F+ E +
Sbjct: 4 DPAWEIPRE----SIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEAN 59
Query: 78 TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
+ + H +V+L ++ ++ E+M GSL + +EG GK KL + +
Sbjct: 60 LMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEG-GKVL-LPKLIDFSAQ 117
Query: 138 TARGIEYLH 146
A G+ Y+
Sbjct: 118 IAEGMAYIE 126
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 14/123 (11%)
Query: 39 GKDGFGSVYKGQLH----TGGLIAVKMLENSNFSAVE---FINEVSTIGRIHHVNVVQLL 91
G+ FGSV +G L T +AVK ++ N S E F++E + + H NV++LL
Sbjct: 43 GEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLL 102
Query: 92 GFYSEGS-----KRALVYEYMPNGSLDRHIFPN--EGRGKSFSWEKLHEVALGTARGIEY 144
G E S K ++ +M G L ++ + E K + L + + A G+EY
Sbjct: 103 GVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEY 162
Query: 145 LHN 147
L N
Sbjct: 163 LSN 165
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 52 HTGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNG 110
HTG +AVK ++ E + NEV + HH NVV + Y G + +V E++ G
Sbjct: 68 HTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGG 127
Query: 111 SLD---RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+L H NE E++ V L R + YLHN
Sbjct: 128 ALTDIVTHTRMNE--------EQIATVCLSVLRALSYLHN 159
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 17/146 (11%)
Query: 12 LNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKMLENSN 66
L S P+ LR L ++ L G FG+VYKG G +A+K+L +
Sbjct: 20 LTPSGTAPNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT 79
Query: 67 --FSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP---NEG 121
+ VEF++E + + H ++V+LLG + + LV + MP+G L ++ N G
Sbjct: 80 GPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIG 138
Query: 122 RGKSFSWEKLHEVALGTARGIEYLHN 147
+W + A+G+ YL
Sbjct: 139 SQLLLNW------CVQIAKGMMYLEE 158
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 39 GKDGFGSVYKGQL------HTGGLIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQL 90
G+ FG V++ + ++AVKML E S +F E + + + N+V+L
Sbjct: 56 GEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKL 115
Query: 91 LGFYSEGSKRALVYEYMPNGSLDRHI 116
LG + G L++EYM G L+ +
Sbjct: 116 LGVCAVGKPMCLLFEYMAYGDLNEFL 141
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 19/154 (12%)
Query: 11 VLNRSVDNPSYEDLRKLLD-SGLDLTWSSGKDGFGSVYKGQLHTGGL---IAVKMLEN-- 64
LNR V N + +LD + + G+ FG V K ++ GL A+K ++
Sbjct: 2 ALNRKVKNNPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA 61
Query: 65 SNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSL----------- 112
S +F E+ + ++ HH N++ LLG L EY P+G+L
Sbjct: 62 SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLE 121
Query: 113 -DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
D + S ++L A ARG++YL
Sbjct: 122 TDPAFAIANSTASTLSSQQLLHFAADVARGMDYL 155
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 17/139 (12%)
Query: 19 PSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKMLENSN--FSAVE 71
P+ LR L ++ L G FG+VYKG G +A+K+L + + VE
Sbjct: 4 PNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE 63
Query: 72 FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP---NEGRGKSFSW 128
F++E + + H ++V+LLG + + LV + MP+G L ++ N G +W
Sbjct: 64 FMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW 122
Query: 129 EKLHEVALGTARGIEYLHN 147
+ A+G+ YL
Sbjct: 123 ------CVQIAKGMMYLEE 135
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 39 GKDGFGSVYKGQL------HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQL 90
G+ FG VY+G +AVK + S +EF+NE S + +VV+L
Sbjct: 26 GQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRL 85
Query: 91 LGFYSEGSKRALVYEYMPNGSLD---RHIFP----NEGRGKSFSWEKLHEVALGTARGIE 143
LG S+G +V E M +G L R + P N GR + +++ ++A A G+
Sbjct: 86 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIADGMA 144
Query: 144 YLH 146
YL+
Sbjct: 145 YLN 147
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 39 GKDGFGSVYKGQL------HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQL 90
G+ FG VY+G +AVK + S +EF+NE S + +VV+L
Sbjct: 23 GQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRL 82
Query: 91 LGFYSEGSKRALVYEYMPNGSLD---RHIFP----NEGRGKSFSWEKLHEVALGTARGIE 143
LG S+G +V E M +G L R + P N GR + +++ ++A A G+
Sbjct: 83 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIADGMA 141
Query: 144 YLH 146
YL+
Sbjct: 142 YLN 144
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 39 GKDGFGSVYKGQL------HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQL 90
G+ FG VY+G +AVK + S +EF+NE S + +VV+L
Sbjct: 26 GQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRL 85
Query: 91 LGFYSEGSKRALVYEYMPNGSLD---RHIFP----NEGRGKSFSWEKLHEVALGTARGIE 143
LG S+G +V E M +G L R + P N GR + +++ ++A A G+
Sbjct: 86 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIADGMA 144
Query: 144 YLH 146
YL+
Sbjct: 145 YLN 147
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 39 GKDGFGSVYKGQL------HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQL 90
G+ FG VY+G +AVK + S +EF+NE S + +VV+L
Sbjct: 26 GQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRL 85
Query: 91 LGFYSEGSKRALVYEYMPNGSLD---RHIFP----NEGRGKSFSWEKLHEVALGTARGIE 143
LG S+G +V E M +G L R + P N GR + +++ ++A A G+
Sbjct: 86 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIADGMA 144
Query: 144 YLH 146
YL+
Sbjct: 145 YLN 147
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 19 PSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKML-ENSNFSA-VE 71
P+ LR L ++ L G FG+VYKG G +A+K+L EN++ A E
Sbjct: 6 PNQALLRILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKE 65
Query: 72 FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKL 131
++E + + V +LLG S LV + MP G L H+ N GR S + L
Sbjct: 66 ILDEAYVMAGVGSPYVSRLLGI-CLTSTVQLVTQLMPYGCLLDHVRENRGRLGS---QDL 121
Query: 132 HEVALGTARGIEYLHN 147
+ A+G+ YL +
Sbjct: 122 LNWCMQIAKGMSYLED 137
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 39 GKDGFGSVYKGQL------HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQL 90
G+ FG VY+G +AVK + S +EF+NE S + +VV+L
Sbjct: 27 GQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRL 86
Query: 91 LGFYSEGSKRALVYEYMPNGSLD---RHIFP----NEGRGKSFSWEKLHEVALGTARGIE 143
LG S+G +V E M +G L R + P N GR + +++ ++A A G+
Sbjct: 87 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIADGMA 145
Query: 144 YLH 146
YL+
Sbjct: 146 YLN 148
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 39 GKDGFGSVYKGQL------HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQL 90
G+ FG VY+G +AVK + S +EF+NE S + +VV+L
Sbjct: 26 GQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRL 85
Query: 91 LGFYSEGSKRALVYEYMPNGSLD---RHIFP----NEGRGKSFSWEKLHEVALGTARGIE 143
LG S+G +V E M +G L R + P N GR + +++ ++A A G+
Sbjct: 86 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIADGMA 144
Query: 144 YLH 146
YL+
Sbjct: 145 YLN 147
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 39 GKDGFGSVYKGQL------HTGGLIAVKMLENSNF--SAVEFINEVSTIGRIHHVNVVQL 90
G+ FG VY+G +AVK + S +EF+NE S + +VV+L
Sbjct: 26 GQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRL 85
Query: 91 LGFYSEGSKRALVYEYMPNGSLD---RHIFP----NEGRGKSFSWEKLHEVALGTARGIE 143
LG S+G +V E M +G L R + P N GR + +++ ++A A G+
Sbjct: 86 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIADGMA 144
Query: 144 YLH 146
YL+
Sbjct: 145 YLN 147
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query: 43 FGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRA- 101
FG V+K QL +AVK+ + + + E+ + + H N++Q + GS
Sbjct: 28 FGCVWKAQL-MNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEV 86
Query: 102 ---LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
L+ + GSL ++ +G +W +L VA +RG+ YLH
Sbjct: 87 ELWLITAFHDKGSLTDYL-----KGNIITWNELCHVAETMSRGLSYLHE 130
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 39 GKDGFGSVYKGQL------HTGGLIAVKMLENSN--FSAVEFINEVSTIGRIHHVNVVQL 90
G+ FG VY+G +AVK + S +EF+NE S + +VV+L
Sbjct: 25 GQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRL 84
Query: 91 LGFYSEGSKRALVYEYMPNGSLD---RHIFP----NEGRGKSFSWEKLHEVALGTARGIE 143
LG S+G +V E M +G L R + P N GR + +++ ++A A G+
Sbjct: 85 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIADGMA 143
Query: 144 YLH 146
YL+
Sbjct: 144 YLN 146
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
Query: 18 NPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVS 77
P +ED ++ L L G G V+ G + +AVK L+ + S F+ E +
Sbjct: 1 KPWWEDAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN 60
Query: 78 TIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
+ ++ H +V+L ++ ++ EYM NGSL F G + KL ++A
Sbjct: 61 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQ 117
Query: 138 TARGIEYLHN 147
A G+ ++
Sbjct: 118 IAEGMAFIEE 127
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 21/127 (16%)
Query: 39 GKDGFGSVYKGQLHT------GGLIAVKMLENSNFSA-VEFINEVSTIGRIHHVNVVQLL 91
G+ FG V+ + + L+AVK L++ +A +F E + + H ++V+
Sbjct: 24 GEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFY 83
Query: 92 GFYSEGSKRALVYEYMPNGSLDRHIF-------------PNEGRGKSFSWEKLHEVALGT 138
G +G +V+EYM +G L++ + P + +G+ + LH +A
Sbjct: 84 GVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH-IASQI 142
Query: 139 ARGIEYL 145
A G+ YL
Sbjct: 143 ASGMVYL 149
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 15/114 (13%)
Query: 43 FGSVYKGQLHTGG-----LIAVKMLEN----SNFSAVEFINEVSTIGRIHHVNVVQLLGF 93
FG+V+KG G + +K++E+ +F AV + + IG + H ++V+LLG
Sbjct: 26 FGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAV--TDHMLAIGSLDHAHIVRLLGL 83
Query: 94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
GS LV +Y+P GSL H+ + G + + L + A+G+ YL
Sbjct: 84 -CPGSSLQLVTQYLPLGSLLDHVRQHRG---ALGPQLLLNWGVQIAKGMYYLEE 133
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 15/114 (13%)
Query: 43 FGSVYKGQLHTGG-----LIAVKMLEN----SNFSAVEFINEVSTIGRIHHVNVVQLLGF 93
FG+V+KG G + +K++E+ +F AV + + IG + H ++V+LLG
Sbjct: 44 FGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAV--TDHMLAIGSLDHAHIVRLLGL 101
Query: 94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
GS LV +Y+P GSL H+ + G + + L + A+G+ YL
Sbjct: 102 -CPGSSLQLVTQYLPLGSLLDHVRQHRG---ALGPQLLLNWGVQIAKGMYYLEE 151
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 32 LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLL 91
L L G FG V+ G + +AVK L+ + S F+ E + + ++ H +V+L
Sbjct: 10 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 69
Query: 92 GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
++ ++ EYM NGSL F G + KL ++A A G+ ++
Sbjct: 70 AVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 121
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 32 LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLL 91
L L G FG V+ G + +AVK L+ + S F+ E + + ++ H +V+L
Sbjct: 11 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 70
Query: 92 GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
++ ++ EYM NGSL F G + KL ++A A G+ ++
Sbjct: 71 AVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 122
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 32 LDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLL 91
L L + FG V+K QL +AVK+ + + + EV ++ + H N++Q +
Sbjct: 26 LQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFI 84
Query: 92 GFYSEGSKRA----LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G G+ L+ + GSL + N SW +L +A ARG+ YLH
Sbjct: 85 GAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHE 139
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 15/114 (13%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
G+ FG V K + +A+K +E+ + FI E+ + R++H N+V+L G + +
Sbjct: 18 GRGAFGVVCKAKWRAKD-VAIKQIESESERKA-FIVELRQLSRVNHPNIVKLYG--ACLN 73
Query: 99 KRALVYEYMPNGSL-----DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
LV EY GSL P + SW L ++G+ YLH+
Sbjct: 74 PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHS 121
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 15/114 (13%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
G+ FG V K + +A+K +E+ + FI E+ + R++H N+V+L G + +
Sbjct: 17 GRGAFGVVCKAKWRAKD-VAIKQIESESERKA-FIVELRQLSRVNHPNIVKLYG--ACLN 72
Query: 99 KRALVYEYMPNGSL-----DRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
LV EY GSL P + SW L ++G+ YLH+
Sbjct: 73 PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHS 120
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 39 GKDGFGSVYKGQLHTGGL-IAVK--MLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
G + +VYKG T G+ +A+K L++ + I E+S + + H N+V+L
Sbjct: 14 GNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIH 73
Query: 96 EGSKRALVYEYMPNG---SLDRHIFPNEGRG------KSFSWEKLHEVAL 136
+K LV+E+M N +D N RG K F W+ L +A
Sbjct: 74 TENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAF 123
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 14/122 (11%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQL 90
G+ FG VY+G + +A+K + S +EF+NE S + + +VV+L
Sbjct: 34 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 93
Query: 91 LGFYSEGSKRALVYEYMPNGSLD------RHIFPNEGRGKSFSWEKLHEVALGTARGIEY 144
LG S+G ++ E M G L R N S K+ ++A A G+ Y
Sbjct: 94 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAY 153
Query: 145 LH 146
L+
Sbjct: 154 LN 155
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 39 GKDGFGSVYKGQLHTGG------LIAVKMLENSNFSA-VEFINEVSTIGRIHHVNVVQLL 91
G+ FG V+ + + L+AVK L++++ +A +F E + + H ++V+
Sbjct: 22 GEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFY 81
Query: 92 GFYSEGSKRALVYEYMPNGSLDR 114
G EG +V+EYM +G L++
Sbjct: 82 GVCVEGDPLIMVFEYMKHGDLNK 104
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 14/122 (11%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQL 90
G+ FG VY+G + +A+K + S +EF+NE S + + +VV+L
Sbjct: 24 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 83
Query: 91 LGFYSEGSKRALVYEYMPNGSLD------RHIFPNEGRGKSFSWEKLHEVALGTARGIEY 144
LG S+G ++ E M G L R N S K+ ++A A G+ Y
Sbjct: 84 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAY 143
Query: 145 LH 146
L+
Sbjct: 144 LN 145
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 43 FGSVYKGQLHTGGL-IAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSEGSKR 100
FG V+K + GL +A K+++ E + NE+S + ++ H N++QL + +
Sbjct: 102 FGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDI 161
Query: 101 ALVYEYMPNGSL-DRHI 116
LV EY+ G L DR I
Sbjct: 162 VLVMEYVDGGELFDRII 178
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 32 LDLTWSSGKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVN 86
D+ GK FG+VY + I A+K+L + + EV + H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHI 116
+++L G++ + ++ L+ EY P G++ R +
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYREL 103
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 32 LDLTWSSGKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVN 86
D+ GK FG+VY + I A+K+L + + EV + H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHI 116
+++L G++ + ++ L+ EY P G++ R +
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYREL 103
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 12/105 (11%)
Query: 16 VDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGG-----LIAVKML-ENSNFS 68
+++P +E RK L G L G+ FG V K H G +AVKML EN++ S
Sbjct: 13 LEDPKWEFPRKNLVLGKTL----GEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 69 AV-EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
+ + ++E + + +++H +V++L G S+ L+ EY GSL
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 12/105 (11%)
Query: 16 VDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGG-----LIAVKML-ENSNFS 68
+++P +E RK L G L G+ FG V K H G +AVKML EN++ S
Sbjct: 13 LEDPKWEFPRKNLVLGKTL----GEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 69 AV-EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
+ + ++E + + +++H +V++L G S+ L+ EY GSL
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 23/120 (19%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINE--VSTIGRIHHVNVVQLLGFYSE 96
G+ +G+VYKG L +AVK+ +N FINE + + + H N+ + +
Sbjct: 22 GRGRYGAVYKGSLDERP-VAVKVFSFANRQ--NFINEKNIYRVPLMEHDNIARFIV---- 74
Query: 97 GSKRA---------LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G +R LV EY PNGSL +++ + + W +A RG+ YLH
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLH-----TSDWVSSCRLAHSVTRGLAYLHT 129
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 12/105 (11%)
Query: 16 VDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGG-----LIAVKML-ENSNFS 68
+++P +E RK L G L G+ FG V K H G +AVKML EN++ S
Sbjct: 13 LEDPKWEFPRKNLVLGKTL----GEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 69 AV-EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
+ + ++E + + +++H +V++L G S+ L+ EY GSL
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 18/125 (14%)
Query: 39 GKDGFGSVYKGQLHTGGL---IAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQLLG 92
G+ FG V K ++ GL A+K ++ S +F E+ + ++ HH N++ LLG
Sbjct: 24 GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG 83
Query: 93 FYSEGSKRALVYEYMPNGSL------------DRHIFPNEGRGKSFSWEKLHEVALGTAR 140
L EY P+G+L D + S ++L A AR
Sbjct: 84 ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR 143
Query: 141 GIEYL 145
G++YL
Sbjct: 144 GMDYL 148
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQL 90
G+ FG VY+G + +A+K + S +EF+NE S + + +VV+L
Sbjct: 19 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 78
Query: 91 LGFYSEGSKRALVYEYMPNGSLD---RHIFP---NEGRGKSFSWEKLHEVALGTARGIEY 144
LG S+G ++ E M G L R + P N S K+ ++A A G+ Y
Sbjct: 79 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 138
Query: 145 LH 146
L+
Sbjct: 139 LN 140
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQL 90
G+ FG VY+G + +A+K + S +EF+NE S + + +VV+L
Sbjct: 28 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 87
Query: 91 LGFYSEGSKRALVYEYMPNGSLD---RHIFP---NEGRGKSFSWEKLHEVALGTARGIEY 144
LG S+G ++ E M G L R + P N S K+ ++A A G+ Y
Sbjct: 88 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 147
Query: 145 LH 146
L+
Sbjct: 148 LN 149
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQL 90
G+ FG VY+G + +A+K + S +EF+NE S + + +VV+L
Sbjct: 27 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 86
Query: 91 LGFYSEGSKRALVYEYMPNGSLD---RHIFP---NEGRGKSFSWEKLHEVALGTARGIEY 144
LG S+G ++ E M G L R + P N S K+ ++A A G+ Y
Sbjct: 87 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 146
Query: 145 LH 146
L+
Sbjct: 147 LN 148
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 18/125 (14%)
Query: 39 GKDGFGSVYKGQLHTGGL---IAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQLLG 92
G+ FG V K ++ GL A+K ++ S +F E+ + ++ HH N++ LLG
Sbjct: 34 GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG 93
Query: 93 FYSEGSKRALVYEYMPNGSL------------DRHIFPNEGRGKSFSWEKLHEVALGTAR 140
L EY P+G+L D + S ++L A AR
Sbjct: 94 ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR 153
Query: 141 GIEYL 145
G++YL
Sbjct: 154 GMDYL 158
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQL 90
G+ FG VY+G + +A+K + S +EF+NE S + + +VV+L
Sbjct: 27 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 86
Query: 91 LGFYSEGSKRALVYEYMPNGSLD---RHIFP---NEGRGKSFSWEKLHEVALGTARGIEY 144
LG S+G ++ E M G L R + P N S K+ ++A A G+ Y
Sbjct: 87 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 146
Query: 145 LH 146
L+
Sbjct: 147 LN 148
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQL 90
G+ FG VY+G + +A+K + S +EF+NE S + + +VV+L
Sbjct: 34 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 93
Query: 91 LGFYSEGSKRALVYEYMPNGSLD---RHIFP---NEGRGKSFSWEKLHEVALGTARGIEY 144
LG S+G ++ E M G L R + P N S K+ ++A A G+ Y
Sbjct: 94 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 153
Query: 145 LH 146
L+
Sbjct: 154 LN 155
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + + ++A+K+L + + EV + H N+++L G+
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 80 FHDATRVYLILEYAPLGTVYREL 102
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 16 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 75
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 76 FHDATRVYLILEYAPLGTVYREL 98
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 80 FHDATRVYLILEYAPLGTVYREL 102
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQL 90
G+ FG VY+G + +A+K + S +EF+NE S + + +VV+L
Sbjct: 25 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 84
Query: 91 LGFYSEGSKRALVYEYMPNGSLD---RHIFP---NEGRGKSFSWEKLHEVALGTARGIEY 144
LG S+G ++ E M G L R + P N S K+ ++A A G+ Y
Sbjct: 85 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 144
Query: 145 LH 146
L+
Sbjct: 145 LN 146
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + + ++A+K+L + + EV + H N+++L G+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 77 FHDATRVYLILEYAPLGTVYREL 99
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + + ++A+K+L + + EV + H N+++L G+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 77 FHDATRVYLILEYAPLGTVYREL 99
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 80 FHDATRVYLILEYAPLGTVYREL 102
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 80 FHDATRVYLILEYAPLGTVYREL 102
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 77 FHDATRVYLILEYAPLGTVYREL 99
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQL 90
G+ FG VY+G + +A+K + S +EF+NE S + + +VV+L
Sbjct: 28 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 87
Query: 91 LGFYSEGSKRALVYEYMPNGSLD---RHIFP---NEGRGKSFSWEKLHEVALGTARGIEY 144
LG S+G ++ E M G L R + P N S K+ ++A A G+ Y
Sbjct: 88 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 147
Query: 145 LH 146
L+
Sbjct: 148 LN 149
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 77 FHDATRVYLILEYAPLGTVYREL 99
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 18 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 78 FHDATRVYLILEYAPLGTVYREL 100
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 18 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 78 FHDATRVYLILEYAPLGTVYREL 100
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 77 FHDATRVYLILEYAPLGTVYREL 99
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 21 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 80
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 81 FHDATRVYLILEYAPLGTVYREL 103
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQL 90
G+ FG VY+G + +A+K + S +EF+NE S + + +VV+L
Sbjct: 21 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 80
Query: 91 LGFYSEGSKRALVYEYMPNGSLD---RHIFP---NEGRGKSFSWEKLHEVALGTARGIEY 144
LG S+G ++ E M G L R + P N S K+ ++A A G+ Y
Sbjct: 81 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 140
Query: 145 LH 146
L+
Sbjct: 141 LN 142
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 19 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 78
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 79 FHDATRVYLILEYAPLGTVYREL 101
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQL 90
G+ FG VY+G + +A+K + S +EF+NE S + + +VV+L
Sbjct: 21 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 80
Query: 91 LGFYSEGSKRALVYEYMPNGSLD---RHIFP---NEGRGKSFSWEKLHEVALGTARGIEY 144
LG S+G ++ E M G L R + P N S K+ ++A A G+ Y
Sbjct: 81 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 140
Query: 145 LH 146
L+
Sbjct: 141 LN 142
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 77 FHDATRVYLILEYAPLGTVYREL 99
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 19 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 78
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 79 FHDATRVYLILEYAPLGTVYREL 101
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 80 FHDATRVYLILEYAPLGTVYREL 102
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 82 FHDATRVYLILEYAPLGTVYREL 104
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 77 FHDATRVYLILEYAPLGTVYREL 99
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 34 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 93
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 94 FHDATRVYLILEYAPLGTVYREL 116
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 18 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 78 FHDATRVYLILEYAPLGTVYREL 100
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 82 FHDATRVYLILEYAPLGTVYREL 104
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 82 FHDATRVYLILEYAPLGTVYREL 104
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 80 FHDATRVYLILEYAPLGTVYREL 102
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 52 HTGGLIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE--GSKRALVYEYM 107
+TG +AVK L E+ + E+ + ++H N+V+ G +E G+ L+ E++
Sbjct: 48 NTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
P+GSL ++ N+ + + ++ + A+ +G++YL
Sbjct: 108 PSGSLKEYLPKNKNK---INLKQQLKYAVQICKGMDYL 142
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRIHHVNVVQL 90
G+ FG VY+G + +A+K + S +EF+NE S + + +VV+L
Sbjct: 56 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 115
Query: 91 LGFYSEGSKRALVYEYMPNGSLD---RHIFP---NEGRGKSFSWEKLHEVALGTARGIEY 144
LG S+G ++ E M G L R + P N S K+ ++A A G+ Y
Sbjct: 116 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 175
Query: 145 LH 146
L+
Sbjct: 176 LN 177
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 43 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 102
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 103 FHDATRVYLILEYAPLGTVYREL 125
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 15/104 (14%)
Query: 57 IAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLD 113
+AVKML++ + + I+E+ + I H N++ LLG ++ ++ EY G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 114 RHIFPNEGRGKSFSWEKLH------------EVALGTARGIEYL 145
++ E G +S+ H A ARG+EYL
Sbjct: 123 EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 166
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 52 HTGGLIAVKML--ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE--GSKRALVYEYM 107
+TG +AVK L E+ + E+ + ++H N+V+ G +E G+ L+ E++
Sbjct: 36 NTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 95
Query: 108 PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
P+GSL ++ N+ + + ++ + A+ +G++YL
Sbjct: 96 PSGSLKEYLPKNKNK---INLKQQLKYAVQICKGMDYL 130
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 43 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 102
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 103 FHDATRVYLILEYAPLGTVYREL 125
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 17 GKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 77 FHDSTRVYLILEYAPLGTVYREL 99
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 39 GKDGFGSVYKGQ-LHTGGLIAVK-MLENSNFSAVEFI--NEVSTIGRIHHVNVVQLLGFY 94
G+ +G V+K + TG ++A+K LE+ + ++ I E+ + ++ H N+V LL +
Sbjct: 12 GEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVF 71
Query: 95 SEGSKRALVYEYMPNGSLDRHIFPNEGRG------KSFSWEKLHEV 134
+ LV+EY + L H RG KS +W+ L V
Sbjct: 72 RRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVKSITWQTLQAV 115
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 14 GKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 73
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G++ R +
Sbjct: 74 FHDATRVYLILEYAPLGTVYREL 96
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G + + +
Sbjct: 82 FHDATRVYLILEYAPRGEVYKEL 104
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L + + EV + H N+++L G+
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + ++ L+ EY P G + + +
Sbjct: 82 FHDATRVYLILEYAPRGEVYKEL 104
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTIGRIHHVNVVQLLGF 93
GK FG+VY + I A+K+L S + E+ +HH N+++L +
Sbjct: 32 GKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNY 91
Query: 94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
+ + + L+ EY P G L + + + +F ++ + A + Y H
Sbjct: 92 FYDRRRIYLILEYAPRGELYKEL----QKSCTFDEQRTATIMEELADALMYCH 140
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 39 GKDGFGSVYK-GQLHTGGLIAVK-MLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
GK FG K TG ++ +K ++ + F+ EV + + H NV++ +G +
Sbjct: 19 GKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK 78
Query: 97 GSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ + EY+ G+L R I + + W + A A G+ YLH+
Sbjct: 79 DKRLNFITEYIKGGTL-RGII--KSMDSQYPWSQRVSFAKDIASGMAYLHS 126
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKML----ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + G ++A+K + E+ + I E+S + +HH N+V L+
Sbjct: 30 GEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA-IREISLLKELHHPNIVSLIDVI 88
Query: 95 SEGSKRALVYEYM 107
LV+E+M
Sbjct: 89 HSERCLTLVFEFM 101
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 57 IAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLD 113
+AVKML++ + + I+E+ + I H N++ LLG ++ ++ EY G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 114 RHIFPNEGRGKSFSWEKLH------------EVALGTARGIEYL 145
++ G FS+ H A ARG+EYL
Sbjct: 123 EYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL 166
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 21 YEDLRKLLDSGLDLTWSSGKDGFGSVYKG-QLHTGGLIAVKMLE-NSNFSAVEFINEVST 78
+ED+ KL L G+ + V L G AVK++E + S EV T
Sbjct: 10 FEDMYKLTSELL------GEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVET 63
Query: 79 IGRIH-HVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALG 137
+ + + N+++L+ F+ + ++ LV+E + GS+ HI + K F+ + V
Sbjct: 64 LYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHI----QKQKHFNEREASRVVRD 119
Query: 138 TARGIEYLHN 147
A +++LH
Sbjct: 120 VAAALDFLHT 129
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKML----ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + G ++A+K + E+ + I E+S + +HH N+V L+
Sbjct: 30 GEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA-IREISLLKELHHPNIVSLIDVI 88
Query: 95 SEGSKRALVYEYM 107
LV+E+M
Sbjct: 89 HSERCLTLVFEFM 101
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 39 GKDGFGSVYKGQL-----HTGGLIAVKMLENSNFSAV-EFINEVSTIGRIHHVNVVQLLG 92
GK FGSV + +TG L+AVK L++S +F E+ + +H +V+ G
Sbjct: 19 GKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRG 78
Query: 93 F-YSEGSKR-ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
Y G + LV EY+P+G L + + R +L + +G+EYL
Sbjct: 79 VSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYL 130
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 39 GKDGFGSVYKGQL-----HTGGLIAVKMLENSNFSAV-EFINEVSTIGRIHHVNVVQLLG 92
GK FGSV + +TG L+AVK L++S +F E+ + +H +V+ G
Sbjct: 20 GKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRG 79
Query: 93 F-YSEGSKR-ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
Y G + LV EY+P+G L + + R +L + +G+EYL
Sbjct: 80 VSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYL 131
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 39 GKDGFGSVYKGQL-----HTGGLIAVKMLENSNFSAV-EFINEVSTIGRIHHVNVVQLLG 92
GK FGSV + +TG L+AVK L++S +F E+ + +H +V+ G
Sbjct: 32 GKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRG 91
Query: 93 F-YSEGSKR-ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
Y G + LV EY+P+G L + + R +L + +G+EYL
Sbjct: 92 VSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYL 143
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 39 GKDGFGSVYKGQL-----HTGGLIAVKMLENSNFSAV-EFINEVSTIGRIHHVNVVQLLG 92
GK FGSV + +TG L+AVK L++S +F E+ + +H +V+ G
Sbjct: 16 GKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRG 75
Query: 93 F-YSEGSKR-ALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
Y G LV EY+P+G L + + R +L + +G+EYL
Sbjct: 76 VSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYL 127
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 27/152 (17%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVY--------KGQLHTGGLIAVKMLEN--SN 66
++P +E R L G L G+ FG V K + + +AVKML++ +
Sbjct: 8 EDPRWELPRDRLVLGKPL----GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE 63
Query: 67 FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS 125
+ I+E+ + I H N++ LLG ++ ++ EY G+L ++ G
Sbjct: 64 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 123
Query: 126 FSWEKLH------------EVALGTARGIEYL 145
+S+ H A ARG+EYL
Sbjct: 124 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 155
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 27/152 (17%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVY--------KGQLHTGGLIAVKMLEN--SN 66
++P +E R L G L G+ FG V K + + +AVKML++ +
Sbjct: 12 EDPRWELPRDRLVLGKPL----GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE 67
Query: 67 FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS 125
+ I+E+ + I H N++ LLG ++ ++ EY G+L ++ G
Sbjct: 68 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 127
Query: 126 FSWEKLH------------EVALGTARGIEYL 145
+S+ H A ARG+EYL
Sbjct: 128 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 159
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 27/152 (17%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVY--------KGQLHTGGLIAVKMLEN--SN 66
++P +E R L G L G+ FG V K + + +AVKML++ +
Sbjct: 11 EDPRWELPRDRLVLGKPL----GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE 66
Query: 67 FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS 125
+ I+E+ + I H N++ LLG ++ ++ EY G+L ++ G
Sbjct: 67 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 126
Query: 126 FSWEKLH------------EVALGTARGIEYL 145
+S+ H A ARG+EYL
Sbjct: 127 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 158
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 57 IAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLD 113
+AVKML++ + + I+E+ + I H N++ LLG ++ ++ EY G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 114 RHIFPNEGRGKSFSWEKLH------------EVALGTARGIEYL 145
++ G +S+ H A ARG+EYL
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 166
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 10/141 (7%)
Query: 10 VVLNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-LIAVKMLENSNFS 68
VVL+R+V +D L L L G+ FG V+ G+L L+AVK +
Sbjct: 98 VVLHRAVP----KDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPP 153
Query: 69 --AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSF 126
+F+ E + + H N+V+L+G ++ +V E + G + G
Sbjct: 154 DLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL---RTEGARL 210
Query: 127 SWEKLHEVALGTARGIEYLHN 147
+ L ++ A G+EYL +
Sbjct: 211 RVKTLLQMVGDAAAGMEYLES 231
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 9/125 (7%)
Query: 23 DLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFI-NEVSTIGR 81
D R LLDS + + G G + + + H+G +AVKM++ E + NEV +
Sbjct: 42 DPRLLLDSYVKI--GEGSTGIVCLAREK-HSGRQVAVKMMDLRKQQRRELLFNEVVIMRD 98
Query: 82 IHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
H NVV++ Y G + ++ E++ G+L + ++ R + E++ V +
Sbjct: 99 YQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIV--SQVR---LNEEQIATVCEAVLQA 153
Query: 142 IEYLH 146
+ YLH
Sbjct: 154 LAYLH 158
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 10/141 (7%)
Query: 10 VVLNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-LIAVKMLENSNFS 68
VVL+R+V +D L L L G+ FG V+ G+L L+AVK +
Sbjct: 98 VVLHRAVP----KDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPP 153
Query: 69 --AVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSF 126
+F+ E + + H N+V+L+G ++ +V E + G + G
Sbjct: 154 DLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL---RTEGARL 210
Query: 127 SWEKLHEVALGTARGIEYLHN 147
+ L ++ A G+EYL +
Sbjct: 211 RVKTLLQMVGDAAAGMEYLES 231
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 17 DNPS--YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKML----ENSNFSA 69
D+P + DLR++ G FG+VY + + ++A+K + + SN
Sbjct: 11 DDPEKLFSDLREI-----------GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW 59
Query: 70 VEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWE 129
+ I EV + ++ H N +Q G Y LV EY + D E K
Sbjct: 60 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLL----EVHKKPLQEV 115
Query: 130 KLHEVALGTARGIEYLHN 147
++ V G +G+ YLH+
Sbjct: 116 EIAAVTHGALQGLAYLHS 133
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 57 IAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLD 113
+AVKML++ + + I+E+ + I H N++ LLG ++ ++ EY G+L
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 163
Query: 114 RHIFPNEGRGKSFSWEKLH------------EVALGTARGIEYL 145
++ G +S+ H A ARG+EYL
Sbjct: 164 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 207
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVY--------KGQLHTGGLIAVKMLEN--SN 66
++P +E R L G L G+ FG V K + +AVKML++ +
Sbjct: 26 EDPKWEFPRDKLTLGKPL----GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE 81
Query: 67 FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS 125
+ ++E+ + I H N++ LLG ++ ++ EY G+L ++ G
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 126 FSWE------------KLHEVALGTARGIEYL 145
+S++ L ARG+EYL
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL 173
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVY--------KGQLHTGGLIAVKMLEN--SN 66
++P +E R L G L G+ FG V K + +AVKML++ +
Sbjct: 26 EDPKWEFPRDKLTLGKPL----GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE 81
Query: 67 FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS 125
+ ++E+ + I H N++ LLG ++ ++ EY G+L ++ G
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 126 FSWE------------KLHEVALGTARGIEYL 145
+S++ L ARG+EYL
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL 173
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVY--------KGQLHTGGLIAVKMLEN--SN 66
++P +E R L G L G+ FG V K + +AVKML++ +
Sbjct: 26 EDPKWEFPRDKLTLGKPL----GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE 81
Query: 67 FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS 125
+ ++E+ + I H N++ LLG ++ ++ EY G+L ++ G
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 126 FSWE------------KLHEVALGTARGIEYL 145
+S++ L ARG+EYL
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL 173
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVY--------KGQLHTGGLIAVKMLEN--SN 66
++P +E R L G L G+ FG V K + +AVKML++ +
Sbjct: 26 EDPKWEFPRDKLTLGKPL----GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE 81
Query: 67 FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS 125
+ ++E+ + I H N++ LLG ++ ++ EY G+L ++ G
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 126 FSWE------------KLHEVALGTARGIEYL 145
+S++ L ARG+EYL
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL 173
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/137 (20%), Positives = 58/137 (42%), Gaps = 3/137 (2%)
Query: 11 VLNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAV 70
++ P +D ++ L L G FG V+ + +AVK ++ + S
Sbjct: 163 CMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE 222
Query: 71 EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEK 130
F+ E + + + H +V+L ++ ++ E+M GSL + +EG + K
Sbjct: 223 AFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--K 279
Query: 131 LHEVALGTARGIEYLHN 147
L + + A G+ ++
Sbjct: 280 LIDFSAQIAEGMAFIEQ 296
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVY--------KGQLHTGGLIAVKMLEN--SN 66
++P +E R L G L G+ FG V K + +AVKML++ +
Sbjct: 26 EDPKWEFPRDKLTLGKPL----GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE 81
Query: 67 FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS 125
+ ++E+ + I H N++ LLG ++ ++ EY G+L ++ G
Sbjct: 82 EDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 126 FSWE------------KLHEVALGTARGIEYL 145
+S++ L ARG+EYL
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL 173
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 17 DNPS--YEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKML----ENSNFSA 69
D+P + DLR++ G FG+VY + + ++A+K + + SN
Sbjct: 50 DDPEKLFSDLREI-----------GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW 98
Query: 70 VEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWE 129
+ I EV + ++ H N +Q G Y LV EY + D E K
Sbjct: 99 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLL----EVHKKPLQEV 154
Query: 130 KLHEVALGTARGIEYLHN 147
++ V G +G+ YLH+
Sbjct: 155 EIAAVTHGALQGLAYLHS 172
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVY--------KGQLHTGGLIAVKMLEN--SN 66
++P +E R L G L G+ FG V K + +AVKML++ +
Sbjct: 26 EDPKWEFPRDKLTLGKPL----GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE 81
Query: 67 FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS 125
+ ++E+ + I H N++ LLG ++ ++ EY G+L ++ G
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 126 FSWE------------KLHEVALGTARGIEYL 145
+S++ L ARG+EYL
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL 173
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 9/114 (7%)
Query: 25 RKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTI 79
RK D+ GK FG+VY + I A+K+L S + E+
Sbjct: 9 RKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ 68
Query: 80 GRIHHVNVVQLLGFYSEGSKRALVYEYMPNG----SLDRHIFPNEGRGKSFSWE 129
+ H N++++ ++ + + L+ E+ P G L +H +E R +F E
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 122
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVK--MLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
G+ + +VYKG+ T L+A+K LE+ + I EVS + + H N+V L
Sbjct: 11 GEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH 70
Query: 96 EGSKRALVYEYM 107
LV+EY+
Sbjct: 71 TEKSLTLVFEYL 82
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 3/132 (2%)
Query: 16 VDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINE 75
P +D ++ L L G FG V+ + +AVK ++ + S F+ E
Sbjct: 1 AQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAE 60
Query: 76 VSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVA 135
+ + + H +V+L ++ ++ E+M GSL + +EG + KL + +
Sbjct: 61 ANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFS 117
Query: 136 LGTARGIEYLHN 147
A G+ ++
Sbjct: 118 AQIAEGMAFIEQ 129
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVY--------KGQLHTGGLIAVKMLEN--SN 66
++P +E R L G L G+ FG V K + +AVKML++ +
Sbjct: 72 EDPKWEFPRDKLTLGKPL----GEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE 127
Query: 67 FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS 125
+ ++E+ + I H N++ LLG ++ ++ EY G+L ++ G
Sbjct: 128 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 187
Query: 126 FSWE------------KLHEVALGTARGIEYL 145
+S++ L ARG+EYL
Sbjct: 188 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL 219
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVY--------KGQLHTGGLIAVKMLEN--SN 66
++P +E R L G L G+ FG V K + +AVKML++ +
Sbjct: 13 EDPKWEFPRDKLTLGKPL----GEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE 68
Query: 67 FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS 125
+ ++E+ + I H N++ LLG ++ ++ EY G+L ++ G
Sbjct: 69 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 128
Query: 126 FSWE------------KLHEVALGTARGIEYL 145
+S++ L ARG+EYL
Sbjct: 129 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL 160
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVY--------KGQLHTGGLIAVKMLEN--SN 66
++P +E R L G L G+ FG V K + +AVKML++ +
Sbjct: 15 EDPKWEFPRDKLTLGKPL----GEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE 70
Query: 67 FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS 125
+ ++E+ + I H N++ LLG ++ ++ EY G+L ++ G
Sbjct: 71 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 130
Query: 126 FSWE------------KLHEVALGTARGIEYL 145
+S++ L ARG+EYL
Sbjct: 131 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL 162
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVY--------KGQLHTGGLIAVKMLEN--SN 66
++P +E R L G L G+ FG V K + +AVKML++ +
Sbjct: 18 EDPKWEFPRDKLTLGKPL----GEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE 73
Query: 67 FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS 125
+ ++E+ + I H N++ LLG ++ ++ EY G+L ++ G
Sbjct: 74 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 133
Query: 126 FSWE------------KLHEVALGTARGIEYL 145
+S++ L ARG+EYL
Sbjct: 134 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL 165
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 15/104 (14%)
Query: 57 IAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLD 113
+AVKML++ + + I+E+ + I H N++ LLG ++ ++ EY G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 114 RHIFPNEGRGKSFSWEKLH------------EVALGTARGIEYL 145
++ G + + H A ARG+EYL
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 166
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVY--------KGQLHTGGLIAVKMLEN--SN 66
++P +E R L G L G+ FG V K + + +AVKML++ +
Sbjct: 4 EDPRWELPRDRLVLGKPL----GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE 59
Query: 67 FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS 125
+ I+E+ + I H N++ LLG ++ ++ EY G+L ++ G
Sbjct: 60 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 119
Query: 126 FSWEKLH------------EVALGTARGIEYL 145
+ + H A ARG+EYL
Sbjct: 120 YCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 151
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Query: 39 GKDGFGSV-YKGQLHTGGLIAVKMLENSNFSA--VEFINEVSTIGRIHHVNVVQLLGFYS 95
G GF V + TG ++A+K+++ + + E+ + + H ++ QL
Sbjct: 19 GTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLE 78
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+K +V EY P G L +I + S E+ V + Y+H+
Sbjct: 79 TANKIFMVLEYCPGGELFDYIISQD----RLSEEETRVVFRQIVSAVAYVHS 126
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 39 GKDGFGSVYKGQ-LHTGGLIAVK-MLENSNFSAVEFI--NEVSTIGRIHHVNVVQLLGFY 94
G+ +G V K + TG ++A+K LE+ + V+ I E+ + ++ H N+V LL
Sbjct: 34 GEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVC 93
Query: 95 SEGSKRALVYEYMPNGSLDR-HIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ + LV+E++ + LD +FPN ++ + + GI + H+
Sbjct: 94 KKKKRWYLVFEFVDHTILDDLELFPN-----GLDYQVVQKYLFQIINGIGFCHS 142
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 9/114 (7%)
Query: 25 RKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTI 79
RK D+ GK FG+VY + I A+K+L S + E+
Sbjct: 10 RKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ 69
Query: 80 GRIHHVNVVQLLGFYSEGSKRALVYEYMPNG----SLDRHIFPNEGRGKSFSWE 129
+ H N++++ ++ + + L+ E+ P G L +H +E R +F E
Sbjct: 70 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 123
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 9/114 (7%)
Query: 25 RKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAV----EFINEVSTI 79
RK D+ GK FG+VY + I A+K+L S + E+
Sbjct: 9 RKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ 68
Query: 80 GRIHHVNVVQLLGFYSEGSKRALVYEYMPNG----SLDRHIFPNEGRGKSFSWE 129
+ H N++++ ++ + + L+ E+ P G L +H +E R +F E
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 122
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVY--------KGQLHTGGLIAVKMLEN--SN 66
++P +E R L G L G+ FG V K + +AVKML++ +
Sbjct: 26 EDPKWEFPRDKLTLGKPL----GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE 81
Query: 67 FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRG-- 123
+ ++E+ + I H N++ LLG ++ ++ EY G+L ++ G
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 124 ----------KSFSWEKLHEVALGTARGIEYL 145
+ +++ L ARG+EYL
Sbjct: 142 XSYDINRVPEEQMTFKDLVSCTYQLARGMEYL 173
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 13/120 (10%)
Query: 33 DLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLE-NSNFSAVEFIN-EVSTIGRIHHVN 86
DL + G+ +G V QL T +AVK+++ E I E+ ++H N
Sbjct: 10 DLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHEN 66
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
VV+ G EG+ + L EY G L I P+ G + + H++ G YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 122
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.5 bits (75), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 33 DLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLE-NSNFSAVEFINEVSTIGR-IHHVN 86
DL + G+ +G V QL T +AVK+++ E I + I + ++H N
Sbjct: 9 DLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
VV+ G EG+ + L EY G L I P+ G + + H++ G YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 121
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.5 bits (75), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 33 DLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLE-NSNFSAVEFINEVSTIGR-IHHVN 86
DL + G+ +G V QL T +AVK+++ E I + I + ++H N
Sbjct: 9 DLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
VV+ G EG+ + L EY G L I P+ G + + H++ G YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 121
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 33.5 bits (75), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 33 DLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLE-NSNFSAVEFINEVSTIGR-IHHVN 86
DL + G+ +G V QL T +AVK+++ E I + I + ++H N
Sbjct: 9 DLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
VV+ G EG+ + L EY G L I P+ G + + H++ G YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 121
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 33.5 bits (75), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 33 DLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLE-NSNFSAVEFINEVSTIGR-IHHVN 86
DL + G+ +G V QL T +AVK+++ E I + I + ++H N
Sbjct: 9 DLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
VV+ G EG+ + L EY G L I P+ G + + H++ G YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 121
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 33.5 bits (75), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 33 DLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLE-NSNFSAVEFINEVSTIGR-IHHVN 86
DL + G+ +G V QL T +AVK+++ E I + I + ++H N
Sbjct: 9 DLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
VV+ G EG+ + L EY G L I P+ G + + H++ G YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 121
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 33.5 bits (75), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 33 DLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLE-NSNFSAVEFINEVSTIGR-IHHVN 86
DL + G+ +G V QL T +AVK+++ E I + I + ++H N
Sbjct: 9 DLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
VV+ G EG+ + L EY G L I P+ G + + H++ G YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 121
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.5 bits (75), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 27/152 (17%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVY--------KGQLHTGGLIAVKMLEN--SN 66
++P +E R L G L G+ FG V K + +AVKML++ +
Sbjct: 26 EDPKWEFPRDKLTLGKPL----GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE 81
Query: 67 FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS 125
+ ++E+ + I H N++ LLG ++ ++ Y G+L ++ G
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGME 141
Query: 126 FSWE------------KLHEVALGTARGIEYL 145
+S++ L ARG+EYL
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL 173
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 33 DLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLE-NSNFSAVEFINEVSTIGR-IHHVN 86
DL + G+ +G V QL T +AVK+++ E I + I + ++H N
Sbjct: 10 DLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
VV+ G EG+ + L EY G L I P+ G + + H++ G YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 122
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 33 DLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLE-NSNFSAVEFINEVSTIGR-IHHVN 86
DL + G+ +G V QL T +AVK+++ E I + I + ++H N
Sbjct: 10 DLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
VV+ G EG+ + L EY G L I P+ G + + H++ G YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 122
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 33 DLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLE-NSNFSAVEFINEVSTIGR-IHHVN 86
DL + G+ +G V QL T +AVK+++ E I + I + ++H N
Sbjct: 8 DLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
VV+ G EG+ + L EY G L I P+ G + + H++ G YLH
Sbjct: 65 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 120
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 33 DLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLE-NSNFSAVEFINEVSTIGR-IHHVN 86
DL + G+ +G V QL T +AVK+++ E I + I + ++H N
Sbjct: 9 DLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
VV+ G EG+ + L EY G L I P+ G + + H++ G YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 121
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 33 DLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLE-NSNFSAVEFINEVSTIGR-IHHVN 86
DL + G+ +G V QL T +AVK+++ E I + I + ++H N
Sbjct: 10 DLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
VV+ G EG+ + L EY G L I P+ G + + H++ G YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 122
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 33 DLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLE-NSNFSAVEFINEVSTIGR-IHHVN 86
DL + G+ +G V QL T +AVK+++ E I + I + ++H N
Sbjct: 10 DLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
VV+ G EG+ + L EY G L I P+ G + + H++ G YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 122
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 33 DLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLE-NSNFSAVEFINEVSTIGR-IHHVN 86
DL + G+ +G V QL T +AVK+++ E I + I + ++H N
Sbjct: 9 DLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
VV+ G EG+ + L EY G L I P+ G + + H++ G YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 121
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 3/112 (2%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAV---EFINEVSTIGRIHHVNVVQLLGFYS 95
G FG V+ + + GL V N + S V + E+ + + H N++++ +
Sbjct: 31 GSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFE 90
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ +V E G L I + RGK+ S + E+ + Y H+
Sbjct: 91 DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 33.5 bits (75), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 33 DLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLE-NSNFSAVEFINEVSTIGR-IHHVN 86
DL + G+ +G V QL T +AVK+++ E I + I + ++H N
Sbjct: 10 DLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
VV+ G EG+ + L EY G L I P+ G + + H++ G YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 122
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 14/97 (14%)
Query: 32 LDLTWSSGKDGFGSVYKG------QLHTGGLIAVKMLEN----SNFSAVEFINEVSTIGR 81
L L S G+ FG V + + T +AVKML+ S + A+ + E+ +
Sbjct: 29 LKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKAL--MTELKILTH 86
Query: 82 I-HHVNVVQLLGFYS-EGSKRALVYEYMPNGSLDRHI 116
I HH+NVV LLG + +G ++ EY G+L ++
Sbjct: 87 IGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 18/117 (15%)
Query: 39 GKDGFGSVYKG-QLHTGGLIAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
GK FG VYKG HT ++A+K+++ + + E++ + + + + G Y
Sbjct: 28 GKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSYL 87
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA-----RGIEYLHN 147
+ +K ++ EY+ GS + P L E + T +G++YLH+
Sbjct: 88 KSTKLWIIMEYLGGGSALDLLKPGP----------LEETYIATILREILKGLDYLHS 134
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 33.1 bits (74), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 39 GKDGFGSVYKGQ-LHTGGLIAVKML-ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
GK +G VY G+ L IA+K + E + + E++ + H N+VQ LG +SE
Sbjct: 31 GKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE 90
Query: 97 GSKRALVYEYMPNGSL 112
+ E +P GSL
Sbjct: 91 NGFIKIFMEQVPGGSL 106
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 33.1 bits (74), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 39 GKDGFGSVYKGQLHTGG----LIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQL 90
G FG V +G+ +AVK L+ S E FI EV+ + + H N+++L
Sbjct: 17 GDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRL 76
Query: 91 LGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + +V E P GSL + ++G F L A+ A G+ YL +
Sbjct: 77 YGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH---FLLGTLSRYAVQVAEGMGYLES 129
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 33.1 bits (74), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 9/124 (7%)
Query: 26 KLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAV---EFINEVSTIGRI 82
+L D + G G V K Q GLI + L + + I E+ +
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC 71
Query: 83 HHVNVVQLLG-FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
+ +V G FYS+G + ++ E+M GSLD+ + K E L +V++ RG
Sbjct: 72 NSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVL----KEAKRIPEEILGKVSIAVLRG 126
Query: 142 IEYL 145
+ YL
Sbjct: 127 LAYL 130
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 33.1 bits (74), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 33 DLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLE-NSNFSAVEFINEVSTIGR-IHHVN 86
DL + G+ +G V QL T +AVK+++ E I + I + ++H N
Sbjct: 10 DLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
VV+ G EG+ + L EY G L I P+ G + + H++ G YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 122
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 33.1 bits (74), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 39 GKDGFGSVYKGQ-LHTGGLIAVKML-ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
GK +G VY G+ L IA+K + E + + E++ + H N+VQ LG +SE
Sbjct: 17 GKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE 76
Query: 97 GSKRALVYEYMPNGSL 112
+ E +P GSL
Sbjct: 77 NGFIKIFMEQVPGGSL 92
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 33.1 bits (74), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 39 GKDGFGSVY-KGQLHTGGLIAVKMLENSN-FSAVEFINEVSTIGRIHHVNVVQLLGFYSE 96
G F V+ Q TG L A+K ++ S F NE++ + +I H N+V L Y
Sbjct: 18 GSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYES 77
Query: 97 GSKRALVYEYMPNGSL-DR 114
+ LV + + G L DR
Sbjct: 78 TTHYYLVMQLVSGGELFDR 96
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 33.1 bits (74), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 39 GKDGFGSVYKGQLHTGG----LIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQL 90
G FG V +G+ +AVK L+ S E FI EV+ + + H N+++L
Sbjct: 17 GDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRL 76
Query: 91 LGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + +V E P GSL + ++G F L A+ A G+ YL +
Sbjct: 77 YGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH---FLLGTLSRYAVQVAEGMGYLES 129
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 33.1 bits (74), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 39 GKDGFGSVYKGQLHTGG----LIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQL 90
G FG V +G+ +AVK L+ S E FI EV+ + + H N+++L
Sbjct: 21 GDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRL 80
Query: 91 LGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + +V E P GSL + ++G F L A+ A G+ YL +
Sbjct: 81 YGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH---FLLGTLSRYAVQVAEGMGYLES 133
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 33.1 bits (74), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 33 DLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLE-NSNFSAVEFINEVSTIGR-IHHVN 86
DL + G+ +G V QL T +AVK+++ E I + I + ++H N
Sbjct: 9 DLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
VV+ G EG+ + L EY G L I P+ G + + H++ G YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 121
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 33.1 bits (74), Expect = 0.058, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Query: 19 PSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVST 78
P +D ++ L L G FG V+ + +AVK ++ + S F+ E +
Sbjct: 177 PWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANV 236
Query: 79 IGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGT 138
+ + H +V+L ++ ++ E+M GSL + +EG + KL + +
Sbjct: 237 MKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQI 293
Query: 139 ARGIEYL 145
A G+ ++
Sbjct: 294 AEGMAFI 300
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 17/144 (11%)
Query: 14 RSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKMLENSNFS 68
RS + P+ LR L ++ G FG+VYKG G +A+K L +
Sbjct: 6 RSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP 65
Query: 69 AV--EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP---NEGRG 123
E ++E + + + +V +LLG S L+ + MP G L ++ N G
Sbjct: 66 KANKEILDEAYVMASVDNPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ 124
Query: 124 KSFSWEKLHEVALGTARGIEYLHN 147
+W + A+G+ YL +
Sbjct: 125 YLLNW------CVQIAKGMNYLED 142
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 39 GKDGFGSVYKGQLHTGG----LIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQL 90
G FG V +G+ +AVK L+ S E FI EV+ + + H N+++L
Sbjct: 17 GDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRL 76
Query: 91 LGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + +V E P GSL + ++G F L A+ A G+ YL +
Sbjct: 77 YGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH---FLLGTLSRYAVQVAEGMGYLES 129
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 39 GKDGFGSVYKGQLHTGG----LIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQL 90
G FG V +G+ +AVK L+ S E FI EV+ + + H N+++L
Sbjct: 27 GDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRL 86
Query: 91 LGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + +V E P GSL + ++G F L A+ A G+ YL +
Sbjct: 87 YGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH---FLLGTLSRYAVQVAEGMGYLES 139
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 39 GKDGFGSVYKGQLHTGG----LIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQL 90
G FG V +G+ +AVK L+ S E FI EV+ + + H N+++L
Sbjct: 27 GDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRL 86
Query: 91 LGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + +V E P GSL + ++G F L A+ A G+ YL +
Sbjct: 87 YGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH---FLLGTLSRYAVQVAEGMGYLES 139
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 17/144 (11%)
Query: 14 RSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKMLENSNFS 68
RS + P+ LR L ++ G FG+VYKG G +A+K L +
Sbjct: 6 RSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP 65
Query: 69 AV--EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP---NEGRG 123
E ++E + + + +V +LLG S L+ + MP G L ++ N G
Sbjct: 66 KANKEILDEAYVMASVDNPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ 124
Query: 124 KSFSWEKLHEVALGTARGIEYLHN 147
+W + A+G+ YL +
Sbjct: 125 YLLNW------CVQIAKGMNYLED 142
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.1 bits (74), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 33 DLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLE-NSNFSAVEFINEVSTIGR-IHHVN 86
DL + G+ +G V QL T +AVK+++ E I + I + ++H N
Sbjct: 9 DLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
VV+ G EG+ + L EY G L I P+ G + + H++ G YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 121
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 33.1 bits (74), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 39 GKDGFGSVYKGQLHTGG----LIAVKMLENSNFSAVE----FINEVSTIGRIHHVNVVQL 90
G FG V +G+ +AVK L+ S E FI EV+ + + H N+++L
Sbjct: 21 GDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRL 80
Query: 91 LGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + +V E P GSL + ++G F L A+ A G+ YL +
Sbjct: 81 YGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH---FLLGTLSRYAVQVAEGMGYLES 133
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 33 DLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLE-NSNFSAVEFINEVSTIGR-IHHVN 86
DL + G+ +G V QL T +AVK+++ E I + I + ++H N
Sbjct: 9 DLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
VV+ G EG+ + L EY G L I P+ G + + H++ G YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 121
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 32.7 bits (73), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 39 GKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVE------FINEVSTIGRIHHVNVVQLL 91
G+ F +VYK + +T ++A+K ++ + S + + E+ + + H N++ LL
Sbjct: 19 GEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLL 78
Query: 92 GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ S +LV+++M L+ I N + + L T +G+EYLH
Sbjct: 79 DAFGHKSNISLVFDFM-ETDLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQ 130
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 32.7 bits (73), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 14/143 (9%)
Query: 12 LNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKG-QLHTGGLIAVKMLENSNF--- 67
L+ + D+ +ED+ +L + GK F V + TG AVK+++ + F
Sbjct: 13 LDMADDDVLFEDVYELCEV-------IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSS 65
Query: 68 ---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGK 124
S + E S + H ++V+LL YS +V+E+M L I G
Sbjct: 66 PGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGF 125
Query: 125 SFSWEKLHEVALGTARGIEYLHN 147
+S + Y H+
Sbjct: 126 VYSEAVASHYMRQILEALRYCHD 148
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 32.7 bits (73), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKML----ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK Q + G A+K + E+ + I E+S + + H N+V+L
Sbjct: 11 GEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT-IREISILKELKHSNIVKLYDVI 69
Query: 95 SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ LV+E++ + L + + EG +S + + L GI Y H+
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF---LLQLLNGIAYCHD 118
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 32.7 bits (73), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 16 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 75
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 76 HTENKLYLVFEFL 88
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.7 bits (73), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 33 DLTWSSGKDGFGSVYKGQLH----TGGLIAVKMLE-NSNFSAVEFINEVSTIGR-IHHVN 86
DL + G+ +G V QL T +AVK+++ E I + I + ++H N
Sbjct: 10 DLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 66
Query: 87 VVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
VV+ G EG+ + L EY G L I P+ G + + H++ G YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 122
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 32.7 bits (73), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 39 GKDGFGSVYKG-QLHTGGLIAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
GK FG V+KG T ++A+K+++ + + E++ + + V + G Y
Sbjct: 32 GKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSYL 91
Query: 96 EGSKRALVYEYMPNGS-LDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+GSK ++ EY+ GS LD R F ++ + +G++YLH+
Sbjct: 92 KGSKLWIIMEYLGGGSALDLL------RAGPFDEFQIATMLKEILKGLDYLHS 138
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKML----ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK Q + G A+K + E+ + I E+S + + H N+V+L
Sbjct: 11 GEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT-IREISILKELKHSNIVKLYDVI 69
Query: 95 SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ LV+E++ + L + + EG +S + + L GI Y H+
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF---LLQLLNGIAYCHD 118
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 32.7 bits (73), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKML----ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK Q + G A+K + E+ + I E+S + + H N+V+L
Sbjct: 11 GEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT-IREISILKELKHSNIVKLYDVI 69
Query: 95 SEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ LV+E++ + L + + EG +S + + L GI Y H+
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF---LLQLLNGIAYCHD 118
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 32.7 bits (73), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 15 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 74
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 75 HTENKLYLVFEFL 87
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 32.7 bits (73), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKML----ENSNFSAVEFINEVSTIGRIHHVNVVQLLGF 93
G+ +G VYK + TG ++A+K + E + I E+S + ++H N+V+LL
Sbjct: 15 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLLDV 73
Query: 94 YSEGSKRALVYEYM 107
+K LV+E++
Sbjct: 74 IHTENKLYLVFEFL 87
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 32.7 bits (73), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKML----ENSNFSAVEFINEVSTIGRIHHVNVVQLLGF 93
G+ +G VYK + TG ++A+K + E + I E+S + ++H N+V+LL
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLLDV 70
Query: 94 YSEGSKRALVYEYM 107
+K LV+E++
Sbjct: 71 IHTENKLYLVFEFL 84
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 32.7 bits (73), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKML----ENSNFSAVEFINEVSTIGRIHHVNVVQLLGF 93
G+ +G VYK + TG ++A+K + E + I E+S + ++H N+V+LL
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLLDV 70
Query: 94 YSEGSKRALVYEYM 107
+K LV+E++
Sbjct: 71 IHTENKLYLVFEFL 84
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 32.7 bits (73), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 11 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 70
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 71 HTENKLYLVFEFL 83
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 32.7 bits (73), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKML----ENSNFSAVEFINEVSTIGRIHHVNVVQLLGF 93
G+ +G VYK + TG ++A+K + E + I E+S + ++H N+V+LL
Sbjct: 11 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLLDV 69
Query: 94 YSEGSKRALVYEYM 107
+K LV+E++
Sbjct: 70 IHTENKLYLVFEFL 83
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 32.7 bits (73), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 71
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 72 HTENKLYLVFEFL 84
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 32.7 bits (73), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 11 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 70
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 71 HTENKLYLVFEFL 83
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 32.7 bits (73), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 71
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 72 HTENKLYLVFEFL 84
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 32.7 bits (73), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 14 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 73
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 74 HTENKLYLVFEFL 86
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 32.7 bits (73), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 14 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 73
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 74 HTENKLYLVFEFL 86
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 32.7 bits (73), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 13 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 72
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 73 HTENKLYLVFEFL 85
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 32.7 bits (73), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 14 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 73
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 74 HTENKLYLVFEFL 86
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 32.7 bits (73), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 71
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 72 HTENKLYLVFEFL 84
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 32.7 bits (73), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKML----ENSNFSAVEFINEVSTIGRIHHVNVVQLLGF 93
G+ +G VYK + TG ++A+K + E + I E+S + ++H N+V+LL
Sbjct: 19 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLLDV 77
Query: 94 YSEGSKRALVYEYM 107
+K LV+E++
Sbjct: 78 IHTENKLYLVFEFL 91
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 32.7 bits (73), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKML----ENSNFSAVEFINEVSTIGRIHHVNVVQLLGF 93
G+ +G VYK + TG ++A+K + E + I E+S + ++H N+V+LL
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLLDV 70
Query: 94 YSEGSKRALVYEYM 107
+K LV+E++
Sbjct: 71 IHTENKLYLVFEFL 84
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 32.7 bits (73), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 11 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 70
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 71 HTENKLYLVFEFL 83
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 32.7 bits (73), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 71
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 72 HTENKLYLVFEFL 84
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 32.7 bits (73), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 15 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 74
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 75 HTENKLYLVFEFL 87
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 32.7 bits (73), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 13 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 72
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 73 HTENKLYLVFEFL 85
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 32.7 bits (73), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 14 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 73
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 74 HTENKLYLVFEFL 86
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 32.7 bits (73), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 71
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 72 HTENKLYLVFEFL 84
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 32.7 bits (73), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKML----ENSNFSAVEFINEVSTIGRIHHVNVVQLLGF 93
G+ +G VYK + TG ++A+K + E + I E+S + ++H N+V+LL
Sbjct: 19 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLLDV 77
Query: 94 YSEGSKRALVYEYM 107
+K LV+E++
Sbjct: 78 IHTENKLYLVFEFL 91
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 32.3 bits (72), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKML----ENSNFSAVEFINEVSTIGRIHHVNVVQLLGF 93
G+ +G VYK + TG ++A+K + E + I E+S + ++H N+V+LL
Sbjct: 16 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLLDV 74
Query: 94 YSEGSKRALVYEYM 107
+K LV+E++
Sbjct: 75 IHTENKLYLVFEFL 88
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 32.3 bits (72), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 15 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 74
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 75 HTENKLYLVFEFL 87
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 32.3 bits (72), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKML----ENSNFSAVEFINEVSTIGRIHHVNVVQLLGF 93
G+ +G VYK + TG ++A+K + E + I E+S + ++H N+V+LL
Sbjct: 15 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLLDV 73
Query: 94 YSEGSKRALVYEYM 107
+K LV+E++
Sbjct: 74 IHTENKLYLVFEFL 87
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 32.3 bits (72), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 13 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 72
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 73 HTENKLYLVFEFL 85
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 32.3 bits (72), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 71
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 72 HTENKLYLVFEFL 84
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 32.3 bits (72), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKML----ENSNFSAVEFINEVSTIGRIHHVNVVQLLGF 93
G+ +G VYK + TG ++A+K + E + I E+S + ++H N+V+LL
Sbjct: 13 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLLDV 71
Query: 94 YSEGSKRALVYEYM 107
+K LV+E++
Sbjct: 72 IHTENKLYLVFEFL 85
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 32.3 bits (72), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 13 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 72
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 73 HTENKLYLVFEFL 85
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 27/152 (17%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVY--------KGQLHTGGLIAVKMLEN--SN 66
++P +E R L G L G+ FG V K + +AVKML++ +
Sbjct: 26 EDPKWEFPRDKLTLGKPL----GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE 81
Query: 67 FSAVEFINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKS 125
+ ++E+ + I H N++ LLG ++ ++ Y G+L ++ G
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGME 141
Query: 126 FSWE------------KLHEVALGTARGIEYL 145
+S++ L ARG+EYL
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL 173
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 32.3 bits (72), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 11/117 (9%)
Query: 39 GKDGFGSVYKG-QLHTGGLIAVKMLE---NSNFSAVEFINEVSTIGRIHHVNVVQLLGFY 94
G +GSV +G +A+K L S A E+ + + H NV+ LL +
Sbjct: 51 GSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVF 110
Query: 95 SEGSKRALVYEY---MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG 148
+ S Y++ MP D + G FS EK+ + +G++Y+H+
Sbjct: 111 TPASSLRNFYDFYLVMPFMQTDLQ----KIMGMEFSEEKIQYLVYQMLKGLKYIHSA 163
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 32.3 bits (72), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 33 DLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFI--NEVSTIGRIHHVNVVQL 90
D+ G FG V++ G + V N+ + ++ NE+S + ++HH ++ L
Sbjct: 54 DILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINL 113
Query: 91 LGFYSEGSKRALVYEYMPNGSL 112
+ + + L+ E++ G L
Sbjct: 114 HDAFEDKYEMVLILEFLSGGEL 135
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 32.3 bits (72), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL-IAVK-MLENSNFSAVEFINEVSTI 79
E RK +D + +G+ FG+V G+ + G+ +A+K ++++ F E + + +
Sbjct: 16 ERSRKEMDR-FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDL 73
Query: 80 GRIHHVNVVQLLG-FYSEGSKRA------LVYEYMPN 109
+HH N+VQL FY+ G + +V EY+P+
Sbjct: 74 AVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD 110
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 14/143 (9%)
Query: 12 LNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKG-QLHTGGLIAVKMLENSNF--- 67
L+ + D+ +ED+ +L + GK F V + TG AVK+++ + F
Sbjct: 13 LDMADDDVLFEDVYELCEV-------IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSS 65
Query: 68 ---SAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGK 124
S + E S + H ++V+LL YS +V+E+M L I G
Sbjct: 66 PGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGF 125
Query: 125 SFSWEKLHEVALGTARGIEYLHN 147
+S + Y H+
Sbjct: 126 VYSEAVASHYMRQILEALRYCHD 148
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 33 DLTWSSGKDGFGSVYK-GQLHTGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQL 90
D+ G FG V++ + TG A K + + S E + E+ T+ + H +V L
Sbjct: 54 DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL 113
Query: 91 LGFYSEGSKRALVYEYMPNGSL 112
+ + ++ ++YE+M G L
Sbjct: 114 HDAFEDDNEMVMIYEFMSGGEL 135
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 11/117 (9%)
Query: 39 GKDGFGSVYKG-QLHTGGLIAVKMLE---NSNFSAVEFINEVSTIGRIHHVNVVQLLGFY 94
G +GSV +G +A+K L S A E+ + + H NV+ LL +
Sbjct: 33 GSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVF 92
Query: 95 SEGSKRALVYEY---MPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHNG 148
+ S Y++ MP D + G FS EK+ + +G++Y+H+
Sbjct: 93 TPASSLRNFYDFYLVMPFMQTDLQ----KIMGLKFSEEKIQYLVYQMLKGLKYIHSA 145
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 50/135 (37%), Gaps = 7/135 (5%)
Query: 20 SYEDLRKLLDSGLDLTWSSGKDGFGSVYKG-QLHTGGLIAVKMLENSNF------SAVEF 72
S D L + +L GK F V + TG AVK+++ + F S +
Sbjct: 16 SMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDL 75
Query: 73 INEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLH 132
E S + H ++V+LL YS +V+E+M L I G +S
Sbjct: 76 KREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVAS 135
Query: 133 EVALGTARGIEYLHN 147
+ Y H+
Sbjct: 136 HYMRQILEALRYCHD 150
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 53 TGGLIAVKMLE-NSNFSAVEFINEVSTIGR-IHHVNVVQLLGFYSEGSKRALVYEYMPNG 110
T +AVK+++ E I + I + ++H NVV+ G EG+ + L EY G
Sbjct: 30 TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 89
Query: 111 SLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
L I P+ G + + H++ G YLH
Sbjct: 90 ELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH 121
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 17/146 (11%)
Query: 12 LNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG---LIAVKMLE----N 64
L S + P+ LR L ++ G FG+VYKG G I V ++E
Sbjct: 31 LTPSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREAT 90
Query: 65 SNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP---NEG 121
S + E ++E + + + +V +LLG S L+ + MP G L ++ N G
Sbjct: 91 SPKANKEILDEAYVMASVDNPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIG 149
Query: 122 RGKSFSWEKLHEVALGTARGIEYLHN 147
+W + A+G+ YL +
Sbjct: 150 SQYLLNW------CVQIAKGMNYLED 169
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 53 TGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGS 111
+G L+AVK ++ E + NEV + H NVV++ Y G + +V E++ G+
Sbjct: 44 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 103
Query: 112 LD---RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
L H NE E++ V L + + LH
Sbjct: 104 LTDIVTHTRMNE--------EQIAAVCLAVLQALSVLH 133
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKMLENSNFSAV- 70
+ P+ LR L ++ G FG+VYKG G +A+K L +
Sbjct: 3 EAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 62
Query: 71 -EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP---NEGRGKSF 126
E ++E + + + +V +LLG S L+ + MP G L ++ N G
Sbjct: 63 KEILDEAYVMASVDNPHVCRLLGI-CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL 121
Query: 127 SWEKLHEVALGTARGIEYLHN 147
+W + A+G+ YL +
Sbjct: 122 NW------CVQIAKGMNYLED 136
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 15 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 74
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 75 HTENKLYLVFEHV 87
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIAVKMLE-NSNFSAVE--FINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A+K + ++ V I E+S + ++H N+V+LL
Sbjct: 11 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 70
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 71 HTENKLYLVFEHV 83
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 32 LDLTWSSGKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRI- 82
L+L G+ FG V + + T +AVKML+ ++ ++E+ + I
Sbjct: 29 LNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 83 HHVNVVQLLGFYSE-GSKRALVYEYMPNGSLDRHI-------FPNEGRGKSF-SWEKLHE 133
HH+NVV LLG ++ G ++ E+ G+L ++ P + K F + E L
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIX 148
Query: 134 VALGTARGIEYL 145
+ A+G+E+L
Sbjct: 149 YSFQVAKGMEFL 160
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Query: 22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLH-TGGLIAVKMLENSNFSAVE--FINEVST 78
ED++K+ + L G F V + TG L AVK + E NE++
Sbjct: 18 EDIKKIFEFKETL----GTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAV 73
Query: 79 IGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL-DR 114
+ +I H N+V L Y + LV + + G L DR
Sbjct: 74 LRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDR 110
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKMLENSNFSAV- 70
+ P+ LR L ++ G FG+VYKG G +A+K L +
Sbjct: 4 EAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 63
Query: 71 -EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP---NEGRGKSF 126
E ++E + + + +V +LLG S L+ + MP G L ++ N G
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGI-CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 127 SWEKLHEVALGTARGIEYLHN 147
+W + A+G+ YL +
Sbjct: 123 NW------CVQIAKGMNYLED 137
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 53 TGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGS 111
+G L+AVK ++ E + NEV + H NVV++ Y G + +V E++ G+
Sbjct: 48 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 107
Query: 112 LD---RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
L H NE E++ V L + + LH
Sbjct: 108 LTDIVTHTRMNE--------EQIAAVCLAVLQALSVLH 137
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKMLENSNFSAV- 70
+ P+ LR L ++ G FG+VYKG G +A+K L +
Sbjct: 4 EAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 63
Query: 71 -EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP---NEGRGKSF 126
E ++E + + + +V +LLG S L+ + MP G L ++ N G
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGI-CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 127 SWEKLHEVALGTARGIEYLHN 147
+W + A+G+ YL +
Sbjct: 123 NW------CVQIAKGMNYLED 137
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 53 TGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGS 111
+G L+AVK ++ E + NEV + H NVV++ Y G + +V E++ G+
Sbjct: 55 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 114
Query: 112 LD---RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
L H NE E++ V L + + LH
Sbjct: 115 LTDIVTHTRMNE--------EQIAAVCLAVLQALSVLH 144
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
Query: 33 DLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSNFSAVEFIN---EVSTIGRIHHVNVV 88
D+ GK F V + T GL A K++ SA +F E ++ H N+V
Sbjct: 8 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIV 67
Query: 89 QLLGFYSEGSKRALVYEYMPNGSLDRHIFPNE 120
+L E S LV++ + G L I E
Sbjct: 68 RLHDSIQEESFHYLVFDLVTGGELFEDIVARE 99
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
Query: 33 DLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSNFSAVEFIN---EVSTIGRIHHVNVV 88
D+ GK F V + T GL A K++ SA +F E ++ H N+V
Sbjct: 9 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIV 68
Query: 89 QLLGFYSEGSKRALVYEYMPNGSLDRHIFPNE 120
+L E S LV++ + G L I E
Sbjct: 69 RLHDSIQEESFHYLVFDLVTGGELFEDIVARE 100
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 31.2 bits (69), Expect = 0.22, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 33 DLTWSSGKDGFGSVYK-GQLHTGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQL 90
D+ G FG V++ + TG A K + + S E + E+ T+ + H +V L
Sbjct: 160 DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL 219
Query: 91 LGFYSEGSKRALVYEYMPNGSL 112
+ + ++ ++YE+M G L
Sbjct: 220 HDAFEDDNEMVMIYEFMSGGEL 241
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIA---VKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A +++ + I E+S + ++H N+V+LL
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 71
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 72 HTENKLYLVFEFL 84
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 39 GKDGFGSVYKGQLH-TGGLIA---VKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFY 94
G+ +G VYK + TG ++A +++ + I E+S + ++H N+V+LL
Sbjct: 11 GEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 70
Query: 95 SEGSKRALVYEYM 107
+K LV+E++
Sbjct: 71 HTENKLYLVFEFL 83
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKMLENSNFSAV- 70
+ P+ LR L ++ G FG+VYKG G +A+K L +
Sbjct: 6 EAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 65
Query: 71 -EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP---NEGRGKSF 126
E ++E + + + +V +LLG S L+ + MP G L ++ N G
Sbjct: 66 KEILDEAYVMASVDNPHVCRLLGI-CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL 124
Query: 127 SWEKLHEVALGTARGIEYLHN 147
+W + A+G+ YL +
Sbjct: 125 NW------CVQIAKGMNYLED 139
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 53 TGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGS 111
+G L+AVK ++ E + NEV + H NVV++ Y G + +V E++ G+
Sbjct: 53 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 112
Query: 112 LD---RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
L H NE E++ V L + + LH
Sbjct: 113 LTDIVTHTRMNE--------EQIAAVCLAVLQALSVLH 142
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKMLENSNFSAV- 70
+ P+ LR L ++ G FG+VYKG G +A+K L +
Sbjct: 4 EAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 63
Query: 71 -EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP---NEGRGKSF 126
E ++E + + + +V +LLG S L+ + MP G L ++ N G
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGI-CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 127 SWEKLHEVALGTARGIEYLHN 147
+W + A+G+ YL +
Sbjct: 123 NW------CVQIAKGMNYLED 137
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
Query: 33 DLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSNFSAVEFIN---EVSTIGRIHHVNVV 88
D+ GK F V + T GL A K++ SA +F E ++ H N+V
Sbjct: 9 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIV 68
Query: 89 QLLGFYSEGSKRALVYEYMPNGSLDRHIFPNE 120
+L E S LV++ + G L I E
Sbjct: 69 RLHDSIQEESFHYLVFDLVTGGELFEDIVARE 100
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
Query: 33 DLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSNFSAVEFIN---EVSTIGRIHHVNVV 88
D+ GK F V + T GL A K++ SA +F E ++ H N+V
Sbjct: 32 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIV 91
Query: 89 QLLGFYSEGSKRALVYEYMPNGSLDRHIFPNE 120
+L E S LV++ + G L I E
Sbjct: 92 RLHDSIQEESFHYLVFDLVTGGELFEDIVARE 123
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKMLENSNFSAV- 70
+ P+ LR L ++ G FG+VYKG G +A+K L +
Sbjct: 4 EAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 63
Query: 71 -EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP---NEGRGKSF 126
E ++E + + + +V +LLG S L+ + MP G L ++ N G
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 127 SWEKLHEVALGTARGIEYLHN 147
+W + A+G+ YL +
Sbjct: 123 NW------CVQIAKGMNYLED 137
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 32 LDLTWSSGKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRI- 82
L+L G+ FG V + + T +AVKML+ ++ ++E+ + I
Sbjct: 29 LNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 83 HHVNVVQLLGFYSE-GSKRALVYEYMPNGSLDRHI-------FPNEGRGKSF-SWEKLHE 133
HH+NVV LLG ++ G ++ E+ G+L ++ P + K F + E L
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIC 148
Query: 134 VALGTARGIEYL 145
+ A+G+E+L
Sbjct: 149 YSFQVAKGMEFL 160
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKMLENSNFSAV- 70
+ P+ LR L ++ G FG+VYKG G +A+K L +
Sbjct: 8 EAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 67
Query: 71 -EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP---NEGRGKSF 126
E ++E + + + +V +LLG S L+ + MP G L ++ N G
Sbjct: 68 KEILDEAYVMASVDNPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL 126
Query: 127 SWEKLHEVALGTARGIEYLHN 147
+W + A+G+ YL +
Sbjct: 127 NW------CVQIAKGMNYLED 141
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKMLENSNFSAV- 70
+ P+ LR L ++ G FG+VYKG G +A+K L +
Sbjct: 4 EAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 63
Query: 71 -EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP---NEGRGKSF 126
E ++E + + + +V +LLG S L+ + MP G L ++ N G
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 127 SWEKLHEVALGTARGIEYLHN 147
+W + A+G+ YL +
Sbjct: 123 NW------CVQIAKGMNYLED 137
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKMLENSNFSAV- 70
+ P+ LR L ++ G FG+VYKG G +A+K L +
Sbjct: 3 EAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 62
Query: 71 -EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP---NEGRGKSF 126
E ++E + + + +V +LLG S L+ + MP G L ++ N G
Sbjct: 63 KEILDEAYVMASVDNPHVCRLLGI-CLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLL 121
Query: 127 SWEKLHEVALGTARGIEYLHN 147
+W + A+G+ YL +
Sbjct: 122 NW------CVQIAKGMNYLED 136
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 17 DNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGG-----LIAVKMLENSNFSAV- 70
+ P+ LR L ++ G FG+VYKG G +A+K L +
Sbjct: 27 EAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 86
Query: 71 -EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFP---NEGRGKSF 126
E ++E + + + +V +LLG S L+ + MP G L ++ N G
Sbjct: 87 KEILDEAYVMASVDNPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL 145
Query: 127 SWEKLHEVALGTARGIEYLHN 147
+W + A+G+ YL +
Sbjct: 146 NW------CVQIAKGMNYLED 160
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAVEFINEV------STIGRIHHVNVVQLL 91
G FGSV+K G I A+K + +V+ N + + +G+ H +VV+
Sbjct: 18 GSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHVVRYF 75
Query: 92 GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++E + EY GSL I N F +L ++ L RG+ Y+H+
Sbjct: 76 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 131
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAVEFINEV------STIGRIHHVNVVQLL 91
G FGSV+K G I A+K + +V+ N + + +G+ H +VV+
Sbjct: 18 GSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHVVRYF 75
Query: 92 GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++E + EY GSL I N F +L ++ L RG+ Y+H+
Sbjct: 76 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 131
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 53 TGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGS 111
+G L+AVK ++ E + NEV + H NVV++ Y G + +V E++ G+
Sbjct: 98 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 157
Query: 112 LD---RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
L H NE E++ V L + + LH
Sbjct: 158 LTDIVTHTRMNE--------EQIAAVCLAVLQALSVLH 187
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 22/126 (17%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFY--- 94
G GFG V+K + G +K ++ +N A EV + ++ HVN+V G +
Sbjct: 20 GSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE---REVKALAKLDHVNIVHYNGCWDGF 76
Query: 95 -------SEGSKRA------LVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
S+ S R+ + E+ G+L++ I + RG+ E+ +G
Sbjct: 77 DYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVLALELFEQITKG 134
Query: 142 IEYLHN 147
++Y+H+
Sbjct: 135 VDYIHS 140
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 53 TGGLIAVKMLENSNFSAVE--FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNG 110
T L+A+K + E NE++ + +I H N+V L Y G L+ + + G
Sbjct: 42 TQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG 101
Query: 111 SL 112
L
Sbjct: 102 EL 103
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAVEFINEV------STIGRIHHVNVVQLL 91
G FGSV+K G I A+K + +V+ N + + +G+ H +VV+
Sbjct: 20 GSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHVVRYF 77
Query: 92 GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++E + EY GSL I N F +L ++ L RG+ Y+H+
Sbjct: 78 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 133
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 30.8 bits (68), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Query: 39 GKDGFGSVYKGQLHTGGLI-AVKMLENSNFSAVEFINEV------STIGRIHHVNVVQLL 91
G FGSV+K G I A+K + +V+ N + + +G+ H +VV+
Sbjct: 16 GSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHVVRYF 73
Query: 92 GFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++E + EY GSL I N F +L ++ L RG+ Y+H+
Sbjct: 74 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 129
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 13/114 (11%)
Query: 39 GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSE 96
G+ G+VY + TG +A++ + E I NE+ + + N+V L Y
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 97 GSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + +V EY+ GSL +EG+ + E L +E+LH+
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ--------ALEFLHS 134
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 53 TGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGS 111
+G L+AVK ++ E + NEV + H NVV++ Y G + +V E++ G+
Sbjct: 175 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 234
Query: 112 LD---RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
L H NE E++ V L + + LH
Sbjct: 235 LTDIVTHTRMNE--------EQIAAVCLAVLQALSVLH 264
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 13/114 (11%)
Query: 39 GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSE 96
G+ G+VY + TG +A++ + E I NE+ + + N+V L Y
Sbjct: 30 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 89
Query: 97 GSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + +V EY+ GSL +EG+ + E L +E+LH+
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ--------ALEFLHS 135
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 53 TGGLIAVKMLENSNFSAVE--FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNG 110
T L+A+K + E NE++ + +I H N+V L Y G L+ + + G
Sbjct: 42 TQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG 101
Query: 111 SL 112
L
Sbjct: 102 EL 103
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 13/114 (11%)
Query: 39 GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSE 96
G+ G+VY + TG +A++ + E I NE+ + + N+V L Y
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 97 GSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + +V EY+ GSL +EG+ + E L +E+LH+
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ--------ALEFLHS 134
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 13/114 (11%)
Query: 39 GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSE 96
G+ G+VY + TG +A++ + E I NE+ + + N+V L Y
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 97 GSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + +V EY+ GSL +EG+ + E L +E+LH+
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ--------ALEFLHS 134
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 53 TGGLIAVKMLENSNFSAVE--FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNG 110
T L+A+K + E NE++ + +I H N+V L Y G L+ + + G
Sbjct: 42 TQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG 101
Query: 111 SL 112
L
Sbjct: 102 EL 103
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 53 TGGLIAVKMLENSNFSAVE--FINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNG 110
T L+A+K + E NE++ + +I H N+V L Y G L+ + + G
Sbjct: 42 TQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG 101
Query: 111 SL 112
L
Sbjct: 102 EL 103
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 13/114 (11%)
Query: 39 GKDGFGSVYKG-QLHTGGLIAVKMLENSNFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSE 96
G+ G+VY + TG +A++ + E I NE+ + + N+V L Y
Sbjct: 30 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 89
Query: 97 GSKRALVYEYMPNGSLD---RHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + +V EY+ GSL +EG+ + E L +E+LH+
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ--------ALEFLHS 135
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 20/127 (15%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQ 89
G+ FG V + + T +AVKML+ ++ ++E+ + I HH+NVV
Sbjct: 38 GRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 97
Query: 90 LLGFYSE-GSKRALVYEYMPNGSLDRHI---------FPNEGRGKSF-SWEKLHEVALGT 138
LLG ++ G ++ E+ G+L ++ + E K F + E L +
Sbjct: 98 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQV 157
Query: 139 ARGIEYL 145
A+G+E+L
Sbjct: 158 AKGMEFL 164
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 30.0 bits (66), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 26 KLLDSGLDLTWSSGKDGFGSVYKGQ----LHTGGLIAVKMLENSNF-----SAVEFINEV 76
K+ +L GK G+G V++ + +TG + A+K+L+ + E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 77 STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
+ + + H +V L+ + G K L+ EY+ G L
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL 108
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 29.6 bits (65), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 26 KLLDSGLDLTWSSGKDGFGSVYKGQ----LHTGGLIAVKMLENSNF-----SAVEFINEV 76
K+ +L GK G+G V++ + +TG + A+K+L+ + E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 77 STIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
+ + + H +V L+ + G K L+ EY+ G L
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL 108
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 29.6 bits (65), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 75 EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
EVS + I H NV+ L Y + L+ E + G L F +S + E+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEF 119
Query: 135 ALGTARGIEYLHN 147
G+ YLH+
Sbjct: 120 LKQILNGVYYLHS 132
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 29.6 bits (65), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 75 EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
EVS + I H NV+ L Y + L+ E + G L F +S + E+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEF 119
Query: 135 ALGTARGIEYLHN 147
G+ YLH+
Sbjct: 120 LKQILNGVYYLHS 132
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 21/135 (15%)
Query: 32 LDLTWSSGKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRI- 82
L+L G+ FG V + + T +AVKML+ ++ ++E+ + I
Sbjct: 30 LNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 89
Query: 83 HHVNVVQLLGFYSE-GSKRALVYEYMPNGSLDRHI-----------FPNEGRGKSFSWEK 130
HH+NVV LLG ++ G ++ E+ G+L ++ P + + E
Sbjct: 90 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEH 149
Query: 131 LHEVALGTARGIEYL 145
L + A+G+E+L
Sbjct: 150 LICYSFQVAKGMEFL 164
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 75 EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
EVS + I H NV+ L Y + L+ E + G L F +S + E+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEF 119
Query: 135 ALGTARGIEYLHN 147
G+ YLH+
Sbjct: 120 LKQILNGVYYLHS 132
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 75 EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
EVS + I H NV+ L Y + L+ E + G L F +S + E+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEF 119
Query: 135 ALGTARGIEYLHN 147
G+ YLH+
Sbjct: 120 LKQILNGVYYLHS 132
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 75 EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
EVS + I H NV+ L Y + L+ E + G L F +S + E+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEF 119
Query: 135 ALGTARGIEYLHN 147
G+ YLH+
Sbjct: 120 LKQILNGVYYLHS 132
>pdb|4AFY|A Chain A, Crystal Structure Of The Fimx Eal Domain In Complex With
Reaction Product Pgpg
pdb|4AFY|B Chain B, Crystal Structure Of The Fimx Eal Domain In Complex With
Reaction Product Pgpg
pdb|4AG0|A Chain A, Crystal Structure Of Fimx Eal Domain
pdb|4AG0|B Chain B, Crystal Structure Of Fimx Eal Domain
Length = 274
Score = 29.3 bits (64), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 55 GLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY 106
GLIA ++ E S V F+ S + + + G+Y +G +A+ Y++
Sbjct: 219 GLIA-ELHEQQKLSIVPFVESASVLATLWQAGATYIQGYYLQGPSQAMDYDF 269
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 29.3 bits (64), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVYKGQLHTGGL-IAVKMLENSNF----SAVEFINEVSTIGRIHHVNVVQLLGF 93
G+ F VY+ G+ +A+K ++ + + + I E+ + +++H NV++
Sbjct: 41 GRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYAS 100
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ E ++ +V E G L R I
Sbjct: 101 FIEDNELNIVLELADAGDLSRMI 123
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 29.3 bits (64), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 75 EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
EVS + I H NV+ L Y + L+ E + G L F +S + E+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEF 119
Query: 135 ALGTARGIEYLHN 147
G+ YLH+
Sbjct: 120 LKQILNGVYYLHS 132
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 29.3 bits (64), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 16/134 (11%)
Query: 22 EDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSN-------FSAVEFI 73
E++ D+G +L SGK F V K + + GL A K ++ S +
Sbjct: 7 ENVDDYYDTGEEL--GSGK--FAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 74 NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHE 133
EVS + I H NV+ L Y + L+ E + G L F +S + E+ E
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATE 118
Query: 134 VALGTARGIEYLHN 147
G+ YLH+
Sbjct: 119 FLKQILNGVYYLHS 132
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 29.3 bits (64), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 39 GKDGFGSVY-KGQLHTGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGF 93
G FG V + TG A+K+L+ ++ I NE + ++ +V+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ + S +V EYMP G + H+ R FS A EYLH+
Sbjct: 110 FKDNSNLYMVMEYMPGGDMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 159
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 29.3 bits (64), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 39 GKDGFGSVY-KGQLHTGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGF 93
G FG V + TG A+K+L+ ++ I NE + ++ +V+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ + S +V EYMP G + H+ R FS A EYLH+
Sbjct: 110 FKDNSNLYMVMEYMPGGDMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 159
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 29.3 bits (64), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 75 EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
EVS + I H NV+ L Y + L+ E + G L F +S + E+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEF 119
Query: 135 ALGTARGIEYLHN 147
G+ YLH+
Sbjct: 120 LKQILNGVYYLHS 132
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 29.3 bits (64), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 75 EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
EVS + I H NV+ L Y + L+ E + G L F +S + E+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEF 119
Query: 135 ALGTARGIEYLHN 147
G+ YLH+
Sbjct: 120 LKQILNGVYYLHS 132
>pdb|3HV9|A Chain A, Crystal Structure Of Fimx Eal Domain From Pseudomonas
Aeruginosa
Length = 265
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 55 GLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY 106
GLIA ++ E S V F+ S + + + G+Y +G +A+ Y++
Sbjct: 210 GLIA-ELHEQQKLSIVPFVESASVLATLWQAGATYIQGYYLQGPSQAMDYDF 260
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 6/97 (6%)
Query: 57 IAVKM--LENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGS-LD 113
+A+K LE S E + E+ + + HH N+V + + LV + + GS LD
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 114 --RHIFPN-EGRGKSFSWEKLHEVALGTARGIEYLHN 147
+HI E + + + G+EYLH
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 134
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 75 EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
EVS + I H NV+ L Y + L+ E + G L F +S + E+ E
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEF 118
Query: 135 ALGTARGIEYLHN 147
G+ YLH+
Sbjct: 119 LKQILNGVYYLHS 131
>pdb|3HV8|A Chain A, Crystal Structure Of Fimx Eal Domain From Pseudomonas
Aeruginosa Bound To C-Di-Gmp
Length = 268
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 55 GLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY 106
GLIA ++ E S V F+ S + + + G+Y +G +A+ Y++
Sbjct: 213 GLIA-ELHEQQKLSIVPFVESASVLATLWQAGATYIQGYYLQGPSQAMDYDF 263
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 75 EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
EVS + I H NV+ L Y + L+ E + G L F +S + E+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEF 119
Query: 135 ALGTARGIEYLHN 147
G+ YLH+
Sbjct: 120 LKQILNGVYYLHS 132
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 6/97 (6%)
Query: 57 IAVKM--LENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGS-LD 113
+A+K LE S E + E+ + + HH N+V + + LV + + GS LD
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 114 --RHIFPN-EGRGKSFSWEKLHEVALGTARGIEYLHN 147
+HI E + + + G+EYLH
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 139
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 29.3 bits (64), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 75 EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
EVS + I H NV+ L Y + L+ E + G L F +S + E+ E
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEF 118
Query: 135 ALGTARGIEYLHN 147
G+ YLH+
Sbjct: 119 LKQILNGVYYLHS 131
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 75 EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
EVS + I H NV+ L Y + L+ E + G L F +S + E+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEF 119
Query: 135 ALGTARGIEYLHN 147
G+ YLH+
Sbjct: 120 LKQILNGVYYLHS 132
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKM--LENSNFSAVE-FINEVSTIGRIHHVNVVQLLG 92
GK FG VY G+ H G +A+++ +E N ++ F EV + H NVV +G
Sbjct: 42 GKGRFGQVYHGRWH--GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
>pdb|4J40|A Chain A, Crystal Structure Of The Dual-domain Ggdef-eal Module Of
Fimx From Pseudomonas Aeruginosa
pdb|4J40|B Chain B, Crystal Structure Of The Dual-domain Ggdef-eal Module Of
Fimx From Pseudomonas Aeruginosa
Length = 437
Score = 29.3 bits (64), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 55 GLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEY 106
GLIA ++ E S V F+ S + + + G+Y +G +A+ Y++
Sbjct: 382 GLIA-ELHEQQKLSIVPFVESASVLATLWQAGATYIQGYYLQGPSQAMDYDF 432
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 29.3 bits (64), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 22/129 (17%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQ 89
G+ FG V + + T +AVKML+ ++ ++E+ + I HH+NVV
Sbjct: 36 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 90 LLGFYSE-GSKRALVYEYMPNGSLDRH------------IFPNEGRGKSFSWEKLHEVAL 136
LLG ++ G ++ E+ G+L + + P + + E L +
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 137 GTARGIEYL 145
A+G+E+L
Sbjct: 156 QVAKGMEFL 164
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 29.3 bits (64), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 9/126 (7%)
Query: 24 LRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAV---EFINEVSTIG 80
L +L D + G G V+K GL+ + L + + I E+ +
Sbjct: 3 LGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 62
Query: 81 RIHHVNVVQLLG-FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA 139
+ +V G FYS+G + ++ E+M GSLD+ + GR + L +V++
Sbjct: 63 ECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVI 117
Query: 140 RGIEYL 145
+G+ YL
Sbjct: 118 KGLTYL 123
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 22/129 (17%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQ 89
G+ FG V + + T +AVKML+ ++ ++E+ + I HH+NVV
Sbjct: 36 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 90 LLGFYSE-GSKRALVYEYMPNGSLDRH------------IFPNEGRGKSFSWEKLHEVAL 136
LLG ++ G ++ E+ G+L + + P + + E L +
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 137 GTARGIEYL 145
A+G+E+L
Sbjct: 156 QVAKGMEFL 164
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 22/129 (17%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQ 89
G+ FG V + + T +AVKML+ ++ ++E+ + I HH+NVV
Sbjct: 36 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 90 LLGFYSE-GSKRALVYEYMPNGSLDRH------------IFPNEGRGKSFSWEKLHEVAL 136
LLG ++ G ++ E+ G+L + + P + + E L +
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 137 GTARGIEYL 145
A+G+E+L
Sbjct: 156 QVAKGMEFL 164
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 29.3 bits (64), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 22/129 (17%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQ 89
G+ FG V + + T +AVKML+ ++ ++E+ + I HH+NVV
Sbjct: 73 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 132
Query: 90 LLGFYSE-GSKRALVYEYMPNGSLDRH------------IFPNEGRGKSFSWEKLHEVAL 136
LLG ++ G ++ E+ G+L + + P + + E L +
Sbjct: 133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 192
Query: 137 GTARGIEYL 145
A+G+E+L
Sbjct: 193 QVAKGMEFL 201
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 29.3 bits (64), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 44 GSVYKGQLHTGGLIAVKMLENSNFSAV---EFINEVSTIGRIHHVNVVQLLG-FYSEGSK 99
G V+K GL+ + L + + I E+ + + +V G FYS+G +
Sbjct: 20 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-E 78
Query: 100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
++ E+M GSLD+ + GR + L +V++ +G+ YL
Sbjct: 79 ISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYL 120
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 28.9 bits (63), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 18/117 (15%)
Query: 39 GKDGFGSVYKG-QLHTGGLIAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
GK FG V+KG T ++A+K+++ + + E++ + + V + G Y
Sbjct: 16 GKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL 75
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA-----RGIEYLHN 147
+ +K ++ EY+ GS + P L E + T +G++YLH+
Sbjct: 76 KDTKLWIIMEYLGGGSALDLLEPG----------PLDETQIATILREILKGLDYLHS 122
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 44 GSVYKGQLHTGGLIAVKMLENSNFSAV---EFINEVSTIGRIHHVNVVQLLG-FYSEGSK 99
G V+K GL+ + L + + I E+ + + +V G FYS+G +
Sbjct: 20 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-E 78
Query: 100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
++ E+M GSLD+ + GR + L +V++ +G+ YL
Sbjct: 79 ISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLR 121
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 44 GSVYKGQLHTGGLIAVKMLENSNFSAV---EFINEVSTIGRIHHVNVVQLLG-FYSEGSK 99
G V+K GL+ + L + + I E+ + + +V G FYS+G +
Sbjct: 20 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-E 78
Query: 100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
++ E+M GSLD+ + GR + L +V++ +G+ YL
Sbjct: 79 ISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLR 121
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 44 GSVYKGQLHTGGLIAVKMLENSNFSAV---EFINEVSTIGRIHHVNVVQLLG-FYSEGSK 99
G V+K GL+ + L + + I E+ + + +V G FYS+G +
Sbjct: 20 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-E 78
Query: 100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
++ E+M GSLD+ + GR + L +V++ +G+ YL
Sbjct: 79 ISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYL 120
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 22/129 (17%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQ 89
G+ FG V + + T +AVKML+ ++ ++E+ + I HH+NVV
Sbjct: 27 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 86
Query: 90 LLGFYSE-GSKRALVYEYMPNGSLDRH------------IFPNEGRGKSFSWEKLHEVAL 136
LLG ++ G ++ E+ G+L + + P + + E L +
Sbjct: 87 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 137 GTARGIEYL 145
A+G+E+L
Sbjct: 147 QVAKGMEFL 155
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 44 GSVYKGQLHTGGLIAVKMLENSNFSAV---EFINEVSTIGRIHHVNVVQLLG-FYSEGSK 99
G V+K GL+ + L + + I E+ + + +V G FYS+G +
Sbjct: 39 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-E 97
Query: 100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
++ E+M GSLD+ + GR + L +V++ +G+ YL
Sbjct: 98 ISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLR 140
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 18/117 (15%)
Query: 39 GKDGFGSVYKG-QLHTGGLIAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
GK FG V+KG T ++A+K+++ + + E++ + + V + G Y
Sbjct: 31 GKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL 90
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA-----RGIEYLHN 147
+ +K ++ EY+ GS + P L E + T +G++YLH+
Sbjct: 91 KDTKLWIIMEYLGGGSALDLLEPG----------PLDETQIATILREILKGLDYLHS 137
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 44 GSVYKGQLHTGGLIAVKMLENSNFSAV---EFINEVSTIGRIHHVNVVQLLG-FYSEGSK 99
G V+K GL+ + L + + I E+ + + +V G FYS+G +
Sbjct: 20 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-E 78
Query: 100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYL 145
++ E+M GSLD+ + GR + L +V++ +G+ YL
Sbjct: 79 ISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYL 120
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 18/117 (15%)
Query: 39 GKDGFGSVYKG-QLHTGGLIAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
GK FG V+KG T ++A+K+++ + + E++ + + V + G Y
Sbjct: 16 GKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL 75
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTA-----RGIEYLHN 147
+ +K ++ EY+ GS + P L E + T +G++YLH+
Sbjct: 76 KDTKLWIIMEYLGGGSALDLLEPG----------PLDETQIATILREILKGLDYLHS 122
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 44 GSVYKGQLHTGGLIAVKMLENSNFSAV---EFINEVSTIGRIHHVNVVQLLG-FYSEGSK 99
G V+K GL+ + L + + I E+ + + +V G FYS+G +
Sbjct: 47 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-E 105
Query: 100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
++ E+M GSLD+ + GR + L +V++ +G+ YL
Sbjct: 106 ISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLRE 149
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 22/129 (17%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQ 89
G+ FG V + + T +AVKML+ ++ ++E+ + I HH+NVV
Sbjct: 27 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 86
Query: 90 LLGFYSE-GSKRALVYEYMPNGSLDRH------------IFPNEGRGKSFSWEKLHEVAL 136
LLG ++ G ++ E+ G+L + + P + + E L +
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 137 GTARGIEYL 145
A+G+E+L
Sbjct: 147 QVAKGMEFL 155
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 39 GKDGFGSVYKG-QLHTGGLIAVKMLE--NSNFSAVEFINEVSTIGRIHHVNVVQLLGFYS 95
GK FG V+KG T ++A+K+++ + + E++ + + V + G Y
Sbjct: 36 GKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL 95
Query: 96 EGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ +K ++ EY+ GS + P ++ + +G++YLH+
Sbjct: 96 KDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHS 142
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 22/129 (17%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQ 89
G+ FG V + + T +AVKML+ ++ ++E+ + I HH+NVV
Sbjct: 27 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 86
Query: 90 LLGFYSE-GSKRALVYEYMPNGSLDRH------------IFPNEGRGKSFSWEKLHEVAL 136
LLG ++ G ++ E+ G+L + + P + + E L +
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 137 GTARGIEYL 145
A+G+E+L
Sbjct: 147 QVAKGMEFL 155
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 22/129 (17%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQ 89
G+ FG V + + T +AVKML+ ++ ++E+ + I HH+NVV
Sbjct: 27 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 86
Query: 90 LLGFYSE-GSKRALVYEYMPNGSLDRH------------IFPNEGRGKSFSWEKLHEVAL 136
LLG ++ G ++ E+ G+L + + P + + E L +
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 137 GTARGIEYL 145
A+G+E+L
Sbjct: 147 QVAKGMEFL 155
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 34 LTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQ 89
L + GK F V + + TG +AVK+++ + S + EV + ++H N+V+
Sbjct: 11 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 70
Query: 90 LLGFYSEGSKRALVYEYMPNGSL 112
L LV EY G +
Sbjct: 71 LFEVIETEKTLYLVMEYASGGEV 93
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 22/129 (17%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQ 89
G+ FG V + + T +AVKML+ ++ ++E+ + I HH+NVV
Sbjct: 38 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 97
Query: 90 LLGFYSE-GSKRALVYEYMPNGSLDRHI------------FPNEGRGKSFSWEKLHEVAL 136
LLG ++ G ++ E+ G+L ++ P + + E L +
Sbjct: 98 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSF 157
Query: 137 GTARGIEYL 145
A+G+E+L
Sbjct: 158 QVAKGMEFL 166
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 44 GSVYKGQLHTGGLIAVKMLENSNFSAV---EFINEVSTIGRIHHVNVVQLLG-FYSEGSK 99
G V+K GL+ + L + + I E+ + + +V G FYS+G +
Sbjct: 82 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-E 140
Query: 100 RALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
++ E+M GSLD+ + GR + L +V++ +G+ YL
Sbjct: 141 ISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLR 183
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 34 LTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQ 89
L + GK F V + + TG +AVK+++ + S + EV + ++H N+V+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 90 LLGFYSEGSKRALVYEYMPNGSL 112
L LV EY G +
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEV 100
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 34 LTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQ 89
L + GK F V + + TG +AVK+++ + S + EV + ++H N+V+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 90 LLGFYSEGSKRALVYEYMPNGSL 112
L LV EY G +
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEV 100
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 34 LTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQ 89
L + GK F V + + TG +AVK+++ + S + EV + ++H N+V+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 90 LLGFYSEGSKRALVYEYMPNGSL 112
L LV EY G +
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEV 100
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 34 LTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAV---EFINEVSTIGRIHHVNVVQ 89
L + GK F V + + TG +AVK+++ + + + EV + ++H N+V+
Sbjct: 19 LQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVK 78
Query: 90 LLGFYSEGSKRALVYEYMPNGSL 112
L LV EY G +
Sbjct: 79 LFEVIETEKTLYLVMEYASGGEV 101
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQ 89
G+ FG V + + T +AVKML+ ++ ++E+ + I HH+NVV
Sbjct: 31 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90
Query: 90 LLGFYSE-GSKRALVYEYMPNGSLDRHI 116
LLG ++ G ++ E+ G+L ++
Sbjct: 91 LLGACTKPGGPLMVIVEFCKFGNLSTYL 118
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 28.1 bits (61), Expect = 1.9, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query: 71 EFINEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSL-----DRHIF 117
E NE+S + + H N+++L + + LV E+ G L +RH F
Sbjct: 92 EIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF 143
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQ 89
G+ FG V + + T +AVKML+ ++ ++E+ + I HH+NVV
Sbjct: 36 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 90 LLGFYSE-GSKRALVYEYMPNGSLDRHI 116
LLG ++ G ++ E+ G+L ++
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQ 89
G+ FG V + + T +AVKML+ ++ ++E+ + I HH+NVV
Sbjct: 29 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 88
Query: 90 LLGFYSE-GSKRALVYEYMPNGSLDRHI 116
LLG ++ G ++ E+ G+L ++
Sbjct: 89 LLGACTKPGGPLMVIVEFCKFGNLSTYL 116
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 75 EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
EVS + I H NV+ L Y + L+ E + G L F +S + E+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGEL----FDFLAEKESLTEEEATEF 119
Query: 135 ALGTARGIEYLHN 147
G+ YLH+
Sbjct: 120 LKQILNGVYYLHS 132
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 39 GKDGFGSVYKG------QLHTGGLIAVKMLEN--SNFSAVEFINEVSTIGRI-HHVNVVQ 89
G+ FG V + + T +AVKML+ ++ ++E+ + I HH+NVV
Sbjct: 38 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 97
Query: 90 LLGFYSE-GSKRALVYEYMPNGSLDRHI 116
LLG ++ G ++ E+ G+L ++
Sbjct: 98 LLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 74 NEVSTIGRIHHVNVVQLLG--FYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKL 131
E+ + R+ H NV+QL+ + E K +V EY G + E R F +
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR---FPVCQA 111
Query: 132 HEVALGTARGIEYLHN 147
H G+EYLH+
Sbjct: 112 HGYFCQLIDGLEYLHS 127
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 20/118 (16%)
Query: 39 GKDGFGSVYKGQ-LHTGGLIAVKML---ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFY 94
G+ +G+V+K + T ++A+K + ++ + E+ + + H N+V+L
Sbjct: 11 GEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL 70
Query: 95 SEGSKRALVYEYM----------PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGI 142
K LV+E+ NG LD I KSF ++ L + +R +
Sbjct: 71 HSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIV------KSFLFQLLKGLGFCHSRNV 122
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 20/118 (16%)
Query: 39 GKDGFGSVYKGQ-LHTGGLIAVKML---ENSNFSAVEFINEVSTIGRIHHVNVVQLLGFY 94
G+ +G+V+K + T ++A+K + ++ + E+ + + H N+V+L
Sbjct: 11 GEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL 70
Query: 95 SEGSKRALVYEYM----------PNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGI 142
K LV+E+ NG LD I KSF ++ L + +R +
Sbjct: 71 HSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIV------KSFLFQLLKGLGFCHSRNV 122
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 33 DLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSNFSAV-------EFINEVSTIGRIHH 84
D+ G F V K + + GL A K ++ A E EVS + ++ H
Sbjct: 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLH 74
Query: 85 VNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEY 144
N++ L Y + L+ E + G L F + +S S E+ G+ Y
Sbjct: 75 PNIITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 145 LHN 147
LH
Sbjct: 131 LHT 133
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 57 IAVKMLENSNFSAVE--FINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSLD 113
+AVKML+++ + + ++E+ + + H N+V LLG + G ++ EY G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 114 RHIFPNEGRGKSFSWEKLH 132
+ G +S+ H
Sbjct: 139 NFLRRKRPPGLEYSYNPSH 157
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 34 LTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQ 89
L + GK F V + + TG +AV++++ + S + EV + ++H N+V+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 90 LLGFYSEGSKRALVYEYMPNGSL 112
L LV EY G +
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEV 100
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 34 LTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQ 89
L + GK F V + + TG +AV++++ + S + EV + ++H N+V+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 90 LLGFYSEGSKRALVYEYMPNGSL 112
L LV EY G +
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEV 100
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 39 GKDGFGSVY-KGQLHTGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGF 93
G FG V + TG A+K+L+ ++ I NE + ++ +V+L
Sbjct: 36 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 95
Query: 94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ + S +V EY+P G + H+ R FS A EYLH+
Sbjct: 96 FKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 145
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 39 GKDGFGSVYKG-QLHTGGLIAVKML----ENSNFSAVEFINEVSTIGRIHHVNVVQLLGF 93
G+ +G VYK T +A+K + E I EVS + + H N+++L
Sbjct: 43 GEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA-IREVSLLKELQHRNIIELKSV 101
Query: 94 YSEGSKRALVYEYMPN 109
+ L++EY N
Sbjct: 102 IHHNHRLHLIFEYAEN 117
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 75 EVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEV 134
EV+ + + H N+VQ + E +V +Y G L + I N +G F +++ +
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRI--NAQKGVLFQEDQILDW 130
Query: 135 ALGTARGIEYLHN 147
+ ++++H+
Sbjct: 131 FVQICLALKHVHD 143
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 34 LTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAV---EFINEVSTIGRIHHVNVVQ 89
L + GK F V + + TG +A+K+++ + + + EV + ++H N+V+
Sbjct: 19 LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVK 78
Query: 90 LLGFYSEGSKRALVYEYMPNGSL 112
L L+ EY G +
Sbjct: 79 LFEVIETEKTLYLIMEYASGGEV 101
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 38 SGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG 97
SG G + + + + L+AVK +E A E+ + H N+V+
Sbjct: 29 SGNFGVARLMRDK-QSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILTP 87
Query: 98 SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLH 146
+ A+V EY G L I N GR FS ++ G+ Y H
Sbjct: 88 THLAIVMEYASGGELFERIC-NAGR---FSEDEARFFFQQLISGVSYCH 132
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 33 DLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSN-------FSAVEFINEVSTIGRIHH 84
D+ G F V K + + GL A K ++ S E EVS + ++ H
Sbjct: 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 85 VNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEY 144
NV+ L Y + L+ E + G L F + +S S E+ G+ Y
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 145 LHN 147
LH
Sbjct: 131 LHT 133
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 33 DLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSN-------FSAVEFINEVSTIGRIHH 84
D+ G F V K + + GL A K ++ S E EVS + ++ H
Sbjct: 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 85 VNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEY 144
NV+ L Y + L+ E + G L F + +S S E+ G+ Y
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 145 LHN 147
LH
Sbjct: 131 LHT 133
>pdb|2ZO6|A Chain A, Crystal Structure Of Kusabira-Cyan (Kcy), A Cyan-Emitting
Gfp-Like Protein
Length = 252
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 99 KRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARG 141
K + +Y +GS++ H F EG G +E H++ L +G
Sbjct: 36 KPEMKMKYFMDGSVNGHEFTVEGEGTGKPYEGKHKITLDVTKG 78
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 34 LTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAV---EFINEVSTIGRIHHVNVVQ 89
L + GK F V + + TG +A+K+++ + + + EV + ++H N+V+
Sbjct: 16 LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVK 75
Query: 90 LLGFYSEGSKRALVYEYMPNGSL 112
L L+ EY G +
Sbjct: 76 LFEVIETEKTLYLIMEYASGGEV 98
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 39 GKDGFGSVY-KGQLHTGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGF 93
G FG V + TG A+K+L+ ++ I NE + ++ +V+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ + S +V EY+P G + H+ R FS A EYLH+
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 159
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 33 DLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSN-------FSAVEFINEVSTIGRIHH 84
D+ G F V K + + GL A K ++ S E EVS + ++ H
Sbjct: 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 85 VNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEY 144
NV+ L Y + L+ E + G L F + +S S E+ G+ Y
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 145 LHN 147
LH
Sbjct: 131 LHT 133
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 39 GKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEGS 98
G GFG V+K + G V N E EV + ++ HVN+V G + +G
Sbjct: 21 GSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE--REVKALAKLDHVNIVHYNGCW-DG- 76
Query: 99 KRALVYEYMPNGSLD 113
++Y P S D
Sbjct: 77 -----FDYDPETSDD 86
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 39 GKDGFGSVY-KGQLHTGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGF 93
G FG V + TG A+K+L+ ++ I NE + ++ +V+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ + S +V EY+P G + H+ R FS A EYLH+
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 159
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 33 DLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSN-------FSAVEFINEVSTIGRIHH 84
D+ G F V K + + GL A K ++ S E EVS + ++ H
Sbjct: 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 85 VNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEY 144
NV+ L Y + L+ E + G L F + +S S E+ G+ Y
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 145 LHN 147
LH
Sbjct: 131 LHT 133
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 39 GKDGFGSVY-KGQLHTGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGF 93
G FG V + TG A+K+L+ ++ I NE + ++ +V+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ + S +V EY+P G + H+ R FS A EYLH+
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 159
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 39 GKDGFGSVY-KGQLHTGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGF 93
G FG V + TG A+K+L+ ++ I NE + ++ +V+L
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ + S +V EY+P G + H+ R FS A EYLH+
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 160
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 39 GKDGFGSVYKGQLH------TGGLIAVKMLENS-NFSAVE-FINEVSTIGRI-HHVNVVQ 89
G FG V + + +AVKML+ S + + E ++E+ + + +H+N+V
Sbjct: 48 GAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVN 107
Query: 90 LLGFYSEGSKRALVYEYMPNGSL 112
LLG + G ++ EY G L
Sbjct: 108 LLGACTIGGPTLVITEYCCYGDL 130
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 34 LTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNF---SAVEFINEVSTIGRIHHVNVVQ 89
L + GK F V + + TG +AVK+++ + S + EV ++H N+V+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVK 77
Query: 90 LLGFYSEGSKRALVYEYMPNGSL 112
L LV EY G +
Sbjct: 78 LFEVIETEKTLYLVXEYASGGEV 100
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 39 GKDGFGSVY-KGQLHTGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGF 93
G FG V + TG A+K+L+ ++ I NE + ++ +V+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ + S +V EY+P G + H+ R FS A EYLH+
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 159
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 39 GKDGFGSVY-KGQLHTGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGF 93
G FG V + TG A+K+L+ ++ I NE + ++ +V+L
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ + S +V EY+P G + H+ R FS A EYLH+
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 160
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 39 GKDGFGSVYKGQLH------TGGLIAVKMLENS-NFSAVE-FINEVSTIGRI-HHVNVVQ 89
G FG V + + +AVKML+ S + + E ++E+ + + +H+N+V
Sbjct: 32 GAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVN 91
Query: 90 LLGFYSEGSKRALVYEYMPNGSL 112
LLG + G ++ EY G L
Sbjct: 92 LLGACTIGGPTLVITEYCCYGDL 114
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 39 GKDGFGSVYKGQLH------TGGLIAVKMLENS-NFSAVE-FINEVSTIGRI-HHVNVVQ 89
G FG V + + +AVKML+ S + + E ++E+ + + +H+N+V
Sbjct: 50 GAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVN 109
Query: 90 LLGFYSEGSKRALVYEYMPNGSL 112
LLG + G ++ EY G L
Sbjct: 110 LLGACTIGGPTLVITEYCCYGDL 132
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 39 GKDGFGSVYKGQLH------TGGLIAVKMLENS-NFSAVE-FINEVSTIGRI-HHVNVVQ 89
G FG V + + +AVKML+ S + + E ++E+ + + +H+N+V
Sbjct: 55 GAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVN 114
Query: 90 LLGFYSEGSKRALVYEYMPNGSL 112
LLG + G ++ EY G L
Sbjct: 115 LLGACTIGGPTLVITEYCCYGDL 137
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 33 DLTWSSGKDGFGSVYKGQLHTGGL-IAVKMLENSN-------FSAVEFINEVSTIGRIHH 84
D+ G F V K + + GL A K ++ S E EVS + ++ H
Sbjct: 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 85 VNVVQLLGFYSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEY 144
NV+ L Y + L+ E + G L F + +S S E+ G+ Y
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 145 LHN 147
LH
Sbjct: 131 LHT 133
>pdb|2FKK|A Chain A, Crystal Structure Of The C-terminal Domain Of The
Bacteriophage T4 Gene Product 10
Length = 206
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 13/70 (18%)
Query: 7 KVLVVLNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSN 66
KVLV N + +P++ LDSG + + ++G TGG +V LEN+N
Sbjct: 89 KVLVGWNEDISDPNFALNNNDLDSGGNPSHTAGG------------TGGSTSV-TLENTN 135
Query: 67 FSAVEFINEV 76
A E EV
Sbjct: 136 LPATETDEEV 145
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 52 HTGGLIAVKMLENS-----NFSAVEFI-NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYE 105
T + A+K++ + N VE I EV + ++HH N+ +L Y + LV E
Sbjct: 49 QTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVME 108
Query: 106 YMPNGS-LDR-HIFPNEGRGKS 125
G LD+ ++F ++ GK
Sbjct: 109 LCHGGHLLDKLNVFIDDSTGKC 130
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 39 GKDGFGSVYKGQLH------TGGLIAVKMLENS-NFSAVE-FINEVSTIGRI-HHVNVVQ 89
G FG V + + +AVKML+ S + + E ++E+ + + +H+N+V
Sbjct: 55 GAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVN 114
Query: 90 LLGFYSEGSKRALVYEYMPNGSL 112
LLG + G ++ EY G L
Sbjct: 115 LLGACTIGGPTLVITEYCCYGDL 137
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 57 IAVKMLENSNFSAVE--FINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
+AVKML+++ + + ++E+ + + H N+V LLG + G ++ EY G L
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 122
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 26.9 bits (58), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 57 IAVKMLENSNFSAVE--FINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
+AVKML+++ + + ++E+ + + H N+V LLG + G ++ EY G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 57 IAVKMLENSNFSAVE--FINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
+AVKML+++ + + ++E+ + + H N+V LLG + G ++ EY G L
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 129
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 53 TGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP 108
TG A+K+L+ ++ I NE + ++ +V+L + + S +V EY+P
Sbjct: 65 TGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVP 124
Query: 109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + H+ R FS A EYLH+
Sbjct: 125 GGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 159
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 53 TGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP 108
TG A+K+L+ ++ I NE + ++ +V+L + + S +V EY+P
Sbjct: 65 TGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVP 124
Query: 109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + H+ R FS A EYLH+
Sbjct: 125 GGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 159
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 57 IAVKMLENSNFSAVE--FINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
+AVKML+++ + + ++E+ + + H N+V LLG + G ++ EY G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
>pdb|2FL8|A Chain A, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|B Chain B, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|C Chain C, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|D Chain D, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|E Chain E, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|F Chain F, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|G Chain G, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|H Chain H, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|I Chain I, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|J Chain J, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|K Chain K, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|L Chain L, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|M Chain M, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|N Chain N, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|O Chain O, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|P Chain P, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|Q Chain Q, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|R Chain R, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL9|A Chain A, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|B Chain B, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|C Chain C, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|D Chain D, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|E Chain E, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|F Chain F, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|G Chain G, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|H Chain H, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|I Chain I, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|J Chain J, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|K Chain K, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|L Chain L, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|M Chain M, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|N Chain N, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|O Chain O, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|P Chain P, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|Q Chain Q, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|R Chain R, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
Length = 602
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 13/70 (18%)
Query: 7 KVLVVLNRSVDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQLHTGGLIAVKMLENSN 66
KVLV N + +P++ LDSG + + ++G TGG +V LEN+N
Sbjct: 485 KVLVGWNEDISDPNFALNNNDLDSGGNPSHTAGG------------TGGSTSV-TLENTN 531
Query: 67 FSAVEFINEV 76
A E EV
Sbjct: 532 LPATETDEEV 541
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 53 TGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP 108
TG A+K+L+ ++ I NE + ++ +V+L + + S +V EY+P
Sbjct: 65 TGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVP 124
Query: 109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + H+ R FS A EYLH+
Sbjct: 125 GGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 159
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 57 IAVKMLENSNFSAVE--FINEVSTIGRI-HHVNVVQLLGFYSEGSKRALVYEYMPNGSL 112
+AVKML+++ + + ++E+ + + H N+V LLG + G ++ EY G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 9/114 (7%)
Query: 39 GKDGFGSVY-KGQLHTGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGF 93
G FG V + TG A+K+L+ ++ I NE + ++ +V+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ + S +V EY P G + H+ R FS A EYLH+
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 159
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 9/114 (7%)
Query: 39 GKDGFGSVY-KGQLHTGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGF 93
G FG V + TG A+K+L+ ++ I NE + ++ +V+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ + S +V EY P G + H+ R FS A EYLH+
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 159
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 9/114 (7%)
Query: 39 GKDGFGSVY-KGQLHTGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGF 93
G FG V + TG A+K+L+ ++ I NE + ++ +V+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ + S +V EY P G + H+ R FS A EYLH+
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 159
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Query: 38 SGKDGFGSVYKGQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIHHVNVVQLLGFYSEG 97
SG G + + +L T L+AVK +E E+ + H N+V+
Sbjct: 30 SGNFGVARLMRDKL-TKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTP 88
Query: 98 SKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ A++ EY G L I N GR FS ++ G+ Y H+
Sbjct: 89 THLAIIMEYASGGELYERIC-NAGR---FSEDEARFFFQQLLSGVSYCHS 134
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 9/114 (7%)
Query: 39 GKDGFGSVY-KGQLHTGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGF 93
G FG V + TG A+K+L+ ++ I NE + ++ +V+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ + S +V EY P G + H+ R FS A EYLH+
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 159
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 53 TGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP 108
TG A+K+L+ ++ I NE + ++ +V+L + + S +V EY+P
Sbjct: 58 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 117
Query: 109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + H+ R FS A EYLH+
Sbjct: 118 GGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 152
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 17/137 (12%)
Query: 16 VDNPSYEDLRKLLDSGLDLTWSSGKDGFGSVYKGQ-LHTGGLIAVKMLENSNFSAVEFIN 74
+DN Y ++KL G+ GF V + LH G A+K + E
Sbjct: 26 IDNKHYLFIQKL-----------GEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQ 74
Query: 75 EVSTIGRI-HHVNVVQLLGFY--SEGSKRA--LVYEYMPNGSLDRHIFPNEGRGKSFSWE 129
+ + R+ +H N+++L+ + G+K L+ + G+L I + +G + +
Sbjct: 75 READMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTED 134
Query: 130 KLHEVALGTARGIEYLH 146
++ + LG RG+E +H
Sbjct: 135 QILWLLLGICRGLEAIH 151
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVY-KGQLHTGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGF 93
G FG V + TG A+K+L+ ++ I NE + ++ +V+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + S +V EY+P G + H+
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHL 132
>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length
Murine Apaf-1
Length = 1256
Score = 26.6 bits (57), Expect = 5.9, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 21 YEDLRKLLDSGLDL-TWSSGKD---GFGSVYKGQLHTGGL 56
Y+DL LL SGL L + SSGKD G S + L GG+
Sbjct: 87 YKDLAALLQSGLPLVSSSSGKDTDGGITSFVRTVLCEGGV 126
>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1
Length = 1249
Score = 26.6 bits (57), Expect = 5.9, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 21 YEDLRKLLDSGLDL-TWSSGKD---GFGSVYKGQLHTGGL 56
Y+DL LL SGL L + SSGKD G S + L GG+
Sbjct: 80 YKDLAALLQSGLPLVSSSSGKDTDGGITSFVRTVLCEGGV 119
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVY-KGQLHTGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGF 93
G FG V + TG A+K+L+ ++ I NE + ++ +V+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + S +V EY+P G + H+
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHL 132
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVY-KGQLHTGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGF 93
G FG V + TG A+K+L+ ++ I NE + ++ +V+L
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + S +V EY+P G + H+
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHL 133
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 53 TGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP 108
TG A+K+L+ ++ I NE + ++ +V+L + + S +V EY+P
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + H+ R FS A EYLH+
Sbjct: 126 GGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 160
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 26.2 bits (56), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 53 TGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP 108
TG A+K+L+ ++ I NE + ++ +V+L + + S +V EY+P
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + H+ R FS A EYLH+
Sbjct: 126 GGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 160
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 26.2 bits (56), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 53 TGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP 108
TG A+K+L+ ++ I NE + ++ +V+L + + S +V EY+P
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + H+ R FS A EYLH+
Sbjct: 126 GGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 160
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 53 TGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP 108
TG A+K+L+ ++ I NE + ++ +V+L + + S +V EY+P
Sbjct: 86 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 145
Query: 109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + H+ R FS A EYLH+
Sbjct: 146 GGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 180
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 25.8 bits (55), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 39 GKDGFGSVY-KGQLHTGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGF 93
G FG V + TG A+K+L+ ++ I NE + ++ +V+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 94 YSEGSKRALVYEYMPNGSLDRHI 116
+ + S +V EY P G + H+
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHL 132
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 25.8 bits (55), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 39 GKDGFGSVYK-GQLHTGGLIAVKMLENSNFSAVEFINEVSTIGRIH----HVNVVQLLGF 93
GK GF Y+ + T + A K++ S ++ST IH + +VV GF
Sbjct: 35 GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGF 94
Query: 94 YSEGSKRALVYEYMPNGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
+ + +V E R + R K+ + + T +G++YLHN
Sbjct: 95 FEDDDFVYVVLEI----CRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHN 144
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 25.8 bits (55), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 53 TGGLIAVKMLENSNFSAVEFI----NEVSTIGRIHHVNVVQLLGFYSEGSKRALVYEYMP 108
TG A+K+L+ ++ I NE + ++ +V+L + + S +V EY P
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 125
Query: 109 NGSLDRHIFPNEGRGKSFSWEKLHEVALGTARGIEYLHN 147
G + H+ R FS A EYLH+
Sbjct: 126 GGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS 160
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,956,839
Number of Sequences: 62578
Number of extensions: 209039
Number of successful extensions: 1185
Number of sequences better than 100.0: 555
Number of HSP's better than 100.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 209
Number of HSP's that attempted gapping in prelim test: 773
Number of HSP's gapped (non-prelim): 557
length of query: 148
length of database: 14,973,337
effective HSP length: 90
effective length of query: 58
effective length of database: 9,341,317
effective search space: 541796386
effective search space used: 541796386
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.7 bits)