BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041456
(92 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255580803|ref|XP_002531222.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223529182|gb|EEF31158.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 314
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 70/85 (82%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIP+T G+AWEQPPPDLASYL+KNRIVYLGMS VPSV ELILAEFLYLQYED EKPIYLY
Sbjct: 99 VIPYTRGSAWEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLY 158
Query: 61 LNSTGTTEVGSFLCHALVFFQISSI 85
+NSTGTT+ G L + F I +
Sbjct: 159 INSTGTTKGGEKLGYETEAFAIHDV 183
>gi|359807363|ref|NP_001241125.1| uncharacterized protein LOC100785827 [Glycine max]
gi|255635880|gb|ACU18287.1| unknown [Glycine max]
Length = 304
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/82 (76%), Positives = 68/82 (82%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIPF G+AWEQPPPDLASYLYKNRIVYLGMS VPSV ELILAEFLYLQYED +KPIYLY
Sbjct: 89 VIPFQRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDDDKPIYLY 148
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTGTT+ G L + F I
Sbjct: 149 INSTGTTKGGEKLGYETEAFAI 170
>gi|224126447|ref|XP_002329556.1| predicted protein [Populus trichocarpa]
gi|118483146|gb|ABK93479.1| unknown [Populus trichocarpa]
gi|222870265|gb|EEF07396.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/82 (76%), Positives = 69/82 (84%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIP+T G+AWEQPPPDLASYL+KNRIVYLGMS VPSV ELILAEFLYLQYED EKPIYLY
Sbjct: 95 VIPYTRGSAWEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLY 154
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTGTT+ G L + F I
Sbjct: 155 INSTGTTKGGEKLGYETEAFAI 176
>gi|356563393|ref|XP_003549948.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like [Glycine max]
Length = 304
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/82 (76%), Positives = 68/82 (82%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIPF G+AWEQPPPDLASYLYKNRIVYLGMS VPSV ELILAEFLYLQYED +KPIYLY
Sbjct: 89 VIPFQRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDDDKPIYLY 148
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTGTT+ G L + F I
Sbjct: 149 INSTGTTKGGEKLGYETEAFAI 170
>gi|449459004|ref|XP_004147236.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like [Cucumis sativus]
gi|449510487|ref|XP_004163680.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like [Cucumis sativus]
Length = 304
Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 67/82 (81%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIPF G+AWEQPPPDLASYLYKNRIVYLGMS VPSV ELILAEFLYLQYED KPIYLY
Sbjct: 89 VIPFARGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDETKPIYLY 148
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTGTT+ G L + F +
Sbjct: 149 VNSTGTTKGGEKLGYETEAFAV 170
>gi|115435898|ref|NP_001042707.1| Os01g0271400 [Oryza sativa Japonica Group]
gi|113532238|dbj|BAF04621.1| Os01g0271400 [Oryza sativa Japonica Group]
Length = 298
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 68/82 (82%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
V+PF GTAW+QPPPDLAS+LYKNRIVYLGM VPSV EL+LAEFLYLQY+DAEKPIYLY
Sbjct: 83 VVPFLRGTAWQQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKPIYLY 142
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTGTT+ G L + F I
Sbjct: 143 INSTGTTKNGEKLGYETEAFAI 164
>gi|56783783|dbj|BAD81195.1| putative ATP-dependent Clp protease proteolytic subunit [Oryza
sativa Japonica Group]
gi|125569868|gb|EAZ11383.1| hypothetical protein OsJ_01248 [Oryza sativa Japonica Group]
Length = 306
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 68/82 (82%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
V+PF GTAW+QPPPDLAS+LYKNRIVYLGM VPSV EL+LAEFLYLQY+DAEKPIYLY
Sbjct: 83 VVPFLRGTAWQQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKPIYLY 142
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTGTT+ G L + F I
Sbjct: 143 INSTGTTKNGEKLGYETEAFAI 164
>gi|242052591|ref|XP_002455441.1| hypothetical protein SORBIDRAFT_03g010870 [Sorghum bicolor]
gi|241927416|gb|EES00561.1| hypothetical protein SORBIDRAFT_03g010870 [Sorghum bicolor]
Length = 291
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 65/73 (89%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
V+PF GTAWEQPPPDLAS+LYKNRIVYLGM VPSV EL+LAEFLYLQY+DAEKPIYLY
Sbjct: 76 VVPFLRGTAWEQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKPIYLY 135
Query: 61 LNSTGTTEVGSFL 73
+NSTGTT+ G L
Sbjct: 136 INSTGTTKNGEKL 148
>gi|297800408|ref|XP_002868088.1| hypothetical protein ARALYDRAFT_493172 [Arabidopsis lyrata subsp.
lyrata]
gi|297313924|gb|EFH44347.1| hypothetical protein ARALYDRAFT_493172 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 68/82 (82%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIPF+ G+A EQPPPDLASYL+KNRIVYLGMS VPSV ELILAEFLYLQYED EKPIYLY
Sbjct: 90 VIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLY 149
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTGTT+ G L + F I
Sbjct: 150 INSTGTTKNGEKLGYDTEAFAI 171
>gi|18414804|ref|NP_567521.1| ATP-dependent Clp protease proteolytic subunit-related protein 4
[Arabidopsis thaliana]
gi|75301253|sp|Q8LB10.1|CLPR4_ARATH RecName: Full=ATP-dependent Clp protease proteolytic
subunit-related protein 4, chloroplastic; Short=ClpR4;
Flags: Precursor
gi|21593086|gb|AAM65035.1| ATP-dependent Clp protease proteolytic subunit ClpR4, putative
[Arabidopsis thaliana]
gi|26450085|dbj|BAC42162.1| putative ClpP protease complex subunit ClpR4 [Arabidopsis thaliana]
gi|332658442|gb|AEE83842.1| ATP-dependent Clp protease proteolytic subunit-related protein 4
[Arabidopsis thaliana]
Length = 305
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 68/82 (82%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIPF+ G+A EQPPPDLASYL+KNRIVYLGMS VPSV ELILAEFLYLQYED EKPIYLY
Sbjct: 90 VIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLY 149
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTGTT+ G L + F I
Sbjct: 150 INSTGTTKNGEKLGYDTEAFAI 171
>gi|2245061|emb|CAB10484.1| Clp proteinase like protein [Arabidopsis thaliana]
gi|7268455|emb|CAB80975.1| Clp proteinase like protein [Arabidopsis thaliana]
Length = 241
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 68/82 (82%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIPF+ G+A EQPPPDLASYL+KNRIVYLGMS VPSV ELILAEFLYLQYED EKPIYLY
Sbjct: 90 VIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLY 149
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTGTT+ G L + F I
Sbjct: 150 INSTGTTKNGEKLGYDTEAFAI 171
>gi|359495737|ref|XP_003635075.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like [Vitis vinifera]
Length = 297
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 68/82 (82%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIPFT G+A +QPPPDL SYL+KNRIVYLGMS VPSV ELILAEFLYLQY+DAEKPIYLY
Sbjct: 82 VIPFTRGSALDQPPPDLPSYLFKNRIVYLGMSLVPSVTELILAEFLYLQYDDAEKPIYLY 141
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTGTT+ G L + F I
Sbjct: 142 INSTGTTKGGEKLGYETEAFAI 163
>gi|297745678|emb|CBI40932.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 68/82 (82%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIPFT G+A +QPPPDL SYL+KNRIVYLGMS VPSV ELILAEFLYLQY+DAEKPIYLY
Sbjct: 67 VIPFTRGSALDQPPPDLPSYLFKNRIVYLGMSLVPSVTELILAEFLYLQYDDAEKPIYLY 126
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTGTT+ G L + F I
Sbjct: 127 INSTGTTKGGEKLGYETEAFAI 148
>gi|217069988|gb|ACJ83354.1| unknown [Medicago truncatula]
Length = 216
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 65/73 (89%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIPF+ GTAWEQPPPDLASYLYKNRIVYLGMS VPSV EL++AEFLYLQY+D KPIY+Y
Sbjct: 89 VIPFSRGTAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELMVAEFLYLQYDDETKPIYMY 148
Query: 61 LNSTGTTEVGSFL 73
+NSTGTT+ G L
Sbjct: 149 INSTGTTKGGEKL 161
>gi|19698857|gb|AAL91164.1| unknown protein [Arabidopsis thaliana]
gi|23197684|gb|AAN15369.1| unknown protein [Arabidopsis thaliana]
Length = 305
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 68/82 (82%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIPF+ G+A EQPPPDLASYL+KNRIVYLGMS VPSV ELILAEFLYLQYED +KPIYLY
Sbjct: 90 VIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEKKPIYLY 149
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTGTT+ G L + F I
Sbjct: 150 INSTGTTKNGEKLGYDTEAFAI 171
>gi|260766931|gb|ACX50407.1| ATP-dependent Clp protease [Eriobotrya japonica]
Length = 305
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 66/82 (80%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VI F G+AWEQPPPDLASYLYKNRIVYLGMS VPSV ELILAEFLYLQYED KPIYLY
Sbjct: 89 VILFQRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDDTKPIYLY 148
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTGTT+ G L + F I
Sbjct: 149 INSTGTTKGGEKLGYETEAFAI 170
>gi|226531596|ref|NP_001140352.1| uncharacterized protein LOC100272400 [Zea mays]
gi|194699128|gb|ACF83648.1| unknown [Zea mays]
gi|414876902|tpg|DAA54033.1| TPA: ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 289
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 57/73 (78%), Positives = 64/73 (87%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
V+PF G AWEQPPPDLAS+LYKNRIVYLGM VPSV EL+LAEFLYLQY+DAEKPIY+Y
Sbjct: 74 VVPFLRGAAWEQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKPIYMY 133
Query: 61 LNSTGTTEVGSFL 73
+NSTGTT+ G L
Sbjct: 134 INSTGTTKNGEKL 146
>gi|326495296|dbj|BAJ85744.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 282
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 60/82 (73%), Positives = 68/82 (82%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIPF GTA+EQPPPDLAS+LYKNRIVYLGM VPSV EL+LAEFLYLQYEDAEKPIY+Y
Sbjct: 68 VIPFLRGTAFEQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYEDAEKPIYMY 127
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTGTT+ G L + F +
Sbjct: 128 INSTGTTKNGEKLGYETEAFAV 149
>gi|357130629|ref|XP_003566950.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like isoform 1 [Brachypodium
distachyon]
gi|357130631|ref|XP_003566951.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like isoform 2 [Brachypodium
distachyon]
Length = 293
Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats.
Identities = 59/82 (71%), Positives = 67/82 (81%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIPF G A+EQPPPDLAS+LYKNRIVYLGM VPSV EL+LAEFLYLQYEDAEKPIY+Y
Sbjct: 79 VIPFLRGHAFEQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYEDAEKPIYMY 138
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTGTT+ G L + F +
Sbjct: 139 INSTGTTKNGEKLGYETEAFAV 160
>gi|125525351|gb|EAY73465.1| hypothetical protein OsI_01344 [Oryza sativa Indica Group]
Length = 284
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 65/82 (79%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
V+PF S TA QPPPDLAS+LYK RIVYLGM +PSV EL+LAEFLYLQY+DAEKPIYLY
Sbjct: 61 VVPFLSVTACHQPPPDLASFLYKYRIVYLGMCLLPSVTELMLAEFLYLQYDDAEKPIYLY 120
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTGTT+ G L + F I
Sbjct: 121 INSTGTTKNGEKLGYETEAFAI 142
>gi|418731097|gb|AFX67013.1| ATP-dependent Clp protease proteolytic subunit [Solanum tuberosum]
Length = 301
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 65/82 (79%), Gaps = 1/82 (1%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIPF SG ++ PPDLASYL+KNRIVYLGMS VPSV ELILAEFLYLQYED +KPIYLY
Sbjct: 88 VIPF-SGDPSQEHPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEDKPIYLY 146
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTGTT+ G L + F +
Sbjct: 147 INSTGTTKGGEKLGYETEAFAV 168
>gi|168007320|ref|XP_001756356.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692395|gb|EDQ78752.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 241
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 62/82 (75%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIPF G A +QPPPDL SYL+KNRIV+L MS VP+V EL++AE LYLQY+D EK IY+Y
Sbjct: 27 VIPFQRGDARQQPPPDLPSYLFKNRIVFLAMSLVPAVTELVMAELLYLQYDDPEKSIYMY 86
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTGTT+ G L + F I
Sbjct: 87 INSTGTTKDGEKLGYETEAFAI 108
>gi|302801676|ref|XP_002982594.1| hypothetical protein SELMODRAFT_116719 [Selaginella
moellendorffii]
gi|302823376|ref|XP_002993341.1| hypothetical protein SELMODRAFT_136938 [Selaginella
moellendorffii]
gi|300138850|gb|EFJ05603.1| hypothetical protein SELMODRAFT_136938 [Selaginella
moellendorffii]
gi|300149693|gb|EFJ16347.1| hypothetical protein SELMODRAFT_116719 [Selaginella
moellendorffii]
Length = 218
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 59/73 (80%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIPF G A QPPPDL SYL+ NRIV+LGMS VP+V ELI+AEFLYLQ+ D EKPIY+Y
Sbjct: 2 VIPFVRGDASAQPPPDLPSYLFHNRIVFLGMSLVPAVTELIMAEFLYLQFVDPEKPIYMY 61
Query: 61 LNSTGTTEVGSFL 73
+NSTGTT+ G L
Sbjct: 62 INSTGTTKDGEKL 74
>gi|168049469|ref|XP_001777185.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671413|gb|EDQ57965.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 62/82 (75%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIPF G A +QPPPDL SYL+KNRIV+L MS VP+V EL++AE LYLQY+D EK IY+Y
Sbjct: 23 VIPFQRGDARQQPPPDLPSYLFKNRIVFLAMSLVPAVTELVMAELLYLQYDDPEKSIYMY 82
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTGTT+ G L + F I
Sbjct: 83 INSTGTTKDGEKLGYETEAFAI 104
>gi|168033939|ref|XP_001769471.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679182|gb|EDQ65632.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 60/82 (73%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIPF G A +QPPPDL SYL+KNRIV+L MS VP+ EL +AE LYLQY+D E+ IY+Y
Sbjct: 23 VIPFQRGDARQQPPPDLPSYLFKNRIVFLAMSLVPAFTELFMAELLYLQYDDPEESIYMY 82
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTGTT+ G L + F I
Sbjct: 83 INSTGTTKDGEKLGYETEAFAI 104
>gi|412990157|emb|CCO19475.1| ATP-dependent Clp protease-like protein [Bathycoccus prasinos]
Length = 236
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 55/70 (78%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIP G A Q PPDL SY++K RIVYLGM+ VPSV ELILAE LYLQYED KPI+LY
Sbjct: 41 VIPSLQGDASSQLPPDLPSYIFKERIVYLGMTLVPSVTELILAELLYLQYEDNNKPIHLY 100
Query: 61 LNSTGTTEVG 70
+NSTGT++ G
Sbjct: 101 INSTGTSKEG 110
>gi|255071097|ref|XP_002507630.1| predicted protein [Micromonas sp. RCC299]
gi|226522905|gb|ACO68888.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 289
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 55/70 (78%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIP G A Q PPDL S+++K RIVYLGM+ VPSV ELILAE LYLQYED KPIYLY
Sbjct: 25 VIPSLQGDASTQAPPDLPSFIFKERIVYLGMTLVPSVTELILAELLYLQYEDKTKPIYLY 84
Query: 61 LNSTGTTEVG 70
+NSTGT++ G
Sbjct: 85 INSTGTSKEG 94
>gi|145343664|ref|XP_001416434.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144576659|gb|ABO94727.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 251
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 55/70 (78%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIP G A Q PPDL S+++K RIVYLGM+ VPSV ELILAE LYLQYED +KPI LY
Sbjct: 55 VIPSLQGDASTQSPPDLPSFIFKERIVYLGMTLVPSVTELILAELLYLQYEDKKKPIQLY 114
Query: 61 LNSTGTTEVG 70
+NSTG+++ G
Sbjct: 115 INSTGSSKDG 124
>gi|308799978|ref|XP_003074770.1| ClpP3 ATP-dependent Clp protease proteolytic subunit ClpR, putat
(IC) [Ostreococcus tauri]
gi|119358788|emb|CAL52028.2| ClpP3 ATP-dependent Clp protease proteolytic subunit ClpR, putat
(IC), partial [Ostreococcus tauri]
Length = 244
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 55/71 (77%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIP G A Q PPDL S++++ RIVYLGM+ VPSV ELILAE LYLQYED +KPI LY
Sbjct: 50 VIPSLQGDAATQSPPDLPSFIFQERIVYLGMTLVPSVTELILAELLYLQYEDKKKPIQLY 109
Query: 61 LNSTGTTEVGS 71
+NSTG+++ G
Sbjct: 110 INSTGSSKDGK 120
>gi|307109710|gb|EFN57947.1| hypothetical protein CHLNCDRAFT_11056, partial [Chlorella
variabilis]
Length = 200
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 58/82 (70%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
VIP +G A +Q PPDL SYL+K RIVY+GMS VP+V EL+LAE LYLQY++ +PIY+Y
Sbjct: 2 VIPALAGDATDQTPPDLPSYLFKERIVYVGMSLVPAVTELVLAEMLYLQYDNPTRPIYMY 61
Query: 61 LNSTGTTEVGSFLCHALVFFQI 82
+NSTG + L + F I
Sbjct: 62 INSTGVIKGSGKLGYESEAFAI 83
>gi|428305262|ref|YP_007142087.1| ATP-dependent Clp protease proteolytic subunit [Crinalium
epipsammum PCC 9333]
gi|428246797|gb|AFZ12577.1| ATP-dependent Clp protease proteolytic subunit [Crinalium
epipsammum PCC 9333]
Length = 219
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 48/65 (73%)
Query: 3 PFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLN 62
P+ + PPPDL S L K RIVYLGM VPSV ELI+AE LYLQYED EKPI +Y+N
Sbjct: 11 PYYGDNFYRTPPPDLPSMLLKERIVYLGMPLVPSVTELIVAELLYLQYEDPEKPIKIYIN 70
Query: 63 STGTT 67
STGT+
Sbjct: 71 STGTS 75
>gi|428217036|ref|YP_007101501.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena sp.
PCC 7367]
gi|427988818|gb|AFY69073.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena sp.
PCC 7367]
Length = 218
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 46/58 (79%)
Query: 9 AWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
A+ PPPDL S L K RIVY+GM V SV ELI+AE LYLQYED EKPIY+Y+NSTGT
Sbjct: 17 AFRSPPPDLQSLLLKERIVYIGMPLVASVTELIVAELLYLQYEDTEKPIYIYINSTGT 74
>gi|330038335|ref|XP_003239570.1| ATP-dependent Clp protease proteolytic subunit [Cryptomonas
paramecium]
gi|327206494|gb|AEA38672.1| ATP-dependent Clp protease proteolytic subunit [Cryptomonas
paramecium]
Length = 243
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 47/55 (85%)
Query: 14 PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
PPDL S L NRIVYLGM VP+V ELI+AEFL+LQYE++EKP+++YLNSTGT+
Sbjct: 49 PPDLPSLLLHNRIVYLGMPLVPAVTELIVAEFLFLQYENSEKPLFMYLNSTGTSN 103
>gi|119512062|ref|ZP_01631156.1| ATP-dependent Clp protease proteolytic subunit [Nodularia
spumigena CCY9414]
gi|119463288|gb|EAW44231.1| ATP-dependent Clp protease proteolytic subunit [Nodularia
spumigena CCY9414]
Length = 220
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 48/65 (73%)
Query: 3 PFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLN 62
P+ + + PPPDL S L K RIVYLGM VP+V ELI+AE LYLQ +D EKPI +Y+N
Sbjct: 12 PYQGDSFYRTPPPDLPSLLMKERIVYLGMPLVPAVTELIIAELLYLQSDDPEKPIKIYIN 71
Query: 63 STGTT 67
STGT+
Sbjct: 72 STGTS 76
>gi|428299970|ref|YP_007138276.1| ATP-dependent Clp protease proteolytic subunit [Calothrix sp. PCC
6303]
gi|428236514|gb|AFZ02304.1| ATP-dependent Clp protease proteolytic subunit [Calothrix sp. PCC
6303]
Length = 220
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 4 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNS 63
++ ++ PPPDL S L K RIVYLG+ VP+V ELI+A+ LYLQ +D EKPI +Y+NS
Sbjct: 13 YSGENSYRTPPPDLESLLLKERIVYLGLPLVPAVTELIVAQLLYLQSDDPEKPIKIYINS 72
Query: 64 TGTT 67
TGT+
Sbjct: 73 TGTS 76
>gi|334182410|ref|NP_001184945.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
gi|332190278|gb|AEE28399.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
Length = 370
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 13 PPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
PPPDL S L RIVY+GM VP+V EL++AE +YLQ+ D ++PIY+Y+NSTGTT
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTT 172
>gi|399949581|gb|AFP65239.1| ATP-dependent Clp protease proteolytic subunit [Chroomonas
mesostigmatica CCMP1168]
Length = 264
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 41/44 (93%)
Query: 24 NRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
NRIVYLGM VP+V ELI+AEFLYLQYE+AEKPI++YLNSTGT+
Sbjct: 75 NRIVYLGMPLVPAVTELIVAEFLYLQYENAEKPIFMYLNSTGTS 118
>gi|51971563|dbj|BAD44446.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
Length = 330
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 13 PPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
PPPDL S L RIVY+GM VP+V EL++AE +YLQ+ D ++PIY+Y+NSTGTT
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTT 172
>gi|297849204|ref|XP_002892483.1| ClpP protease complex subunit ClpR3 [Arabidopsis lyrata subsp.
lyrata]
gi|297338325|gb|EFH68742.1| ClpP protease complex subunit ClpR3 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 13 PPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
PPPDL S L RIVY+GM VP+V EL++AE +YLQ+ D ++PIY+Y+NSTGTT
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTT 172
>gi|18390982|ref|NP_563836.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
gi|79317437|ref|NP_001031008.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
gi|75301131|sp|Q8L770.1|CLPR3_ARATH RecName: Full=ATP-dependent Clp protease proteolytic
subunit-related protein 3, chloroplastic; Short=ClpR3;
AltName: Full=nClpP8; Flags: Precursor
gi|22531207|gb|AAM97107.1| ATP-dependent Clp protease proteolytic subunit (ClpR3), putative
[Arabidopsis thaliana]
gi|25083963|gb|AAN72143.1| ATP-dependent Clp protease proteolytic subunit (ClpR3), putative
[Arabidopsis thaliana]
gi|51968388|dbj|BAD42886.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51968776|dbj|BAD43080.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51968816|dbj|BAD43100.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51969676|dbj|BAD43530.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51969856|dbj|BAD43620.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51969858|dbj|BAD43621.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971032|dbj|BAD44208.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971379|dbj|BAD44354.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971381|dbj|BAD44355.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971625|dbj|BAD44477.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971739|dbj|BAD44534.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|110742786|dbj|BAE99296.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|332190276|gb|AEE28397.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
gi|332190277|gb|AEE28398.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
Length = 330
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 13 PPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
PPPDL S L RIVY+GM VP+V EL++AE +YLQ+ D ++PIY+Y+NSTGTT
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTT 172
>gi|51970012|dbj|BAD43698.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
Length = 315
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 13 PPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
PPPDL S L RIVY+GM VP+V EL++AE +YLQ+ D ++PIY+Y+NSTGTT
Sbjct: 103 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTT 157
>gi|162606046|ref|XP_001713538.1| ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
gi|13794458|gb|AAK39833.1|AF165818_41 ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
Length = 254
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 41/45 (91%)
Query: 24 NRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
NRIVYLGM VP+V ELI+AEFLYLQYE++EKP+Y+YLNSTGT+
Sbjct: 67 NRIVYLGMPLVPAVTELIVAEFLYLQYENSEKPVYMYLNSTGTSN 111
>gi|160331817|ref|XP_001712615.1| clpP1 [Hemiselmis andersenii]
gi|159766064|gb|ABW98290.1| clpP1 [Hemiselmis andersenii]
Length = 257
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 41/45 (91%)
Query: 24 NRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
NRIVYLGM VP+V ELI+AEFLYLQYE+A+KP+++YLNSTGT+
Sbjct: 68 NRIVYLGMPLVPAVTELIVAEFLYLQYENADKPVFMYLNSTGTSN 112
>gi|88770682|gb|ABD51944.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodomonas
salina]
Length = 262
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 41/44 (93%)
Query: 24 NRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
NRIVYLGM VP+V ELI+AEFLYLQYE++EKP+++YLNSTGT+
Sbjct: 73 NRIVYLGMPLVPAVTELIVAEFLYLQYENSEKPVFMYLNSTGTS 116
>gi|224103735|ref|XP_002313173.1| predicted protein [Populus trichocarpa]
gi|222849581|gb|EEE87128.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 42/56 (75%)
Query: 11 EQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
E PPDL S L RI YLGM VP+V EL++A+F+YL YED KPIYLY+NS+GT
Sbjct: 168 ESAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMYLDYEDPSKPIYLYINSSGT 223
>gi|323455402|gb|EGB11270.1| hypothetical protein AURANDRAFT_21676 [Aureococcus
anophagefferens]
Length = 221
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 40/54 (74%)
Query: 13 PPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
PPPDLAS L NRIVYLGM V +V ELI+AE LYL YE KP+ LY+NS GT
Sbjct: 18 PPPDLASLLLHNRIVYLGMPMVSAVTELIVAELLYLNYESPTKPVTLYINSPGT 71
>gi|145350809|ref|XP_001419790.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144580022|gb|ABO98083.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 381
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/53 (62%), Positives = 40/53 (75%)
Query: 14 PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
PPDL S L RI Y+GMS VP+V EL++AE LYL YE AEKP Y+Y+NS G+
Sbjct: 147 PPDLPSLLLNARICYIGMSLVPAVTELVVAELLYLGYEQAEKPCYVYINSGGS 199
>gi|308807867|ref|XP_003081244.1| ATP-dependent Clp protease proteolytic subunit 3 (ISS)
[Ostreococcus tauri]
gi|116059706|emb|CAL55413.1| ATP-dependent Clp protease proteolytic subunit 3 (ISS)
[Ostreococcus tauri]
Length = 335
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/53 (62%), Positives = 40/53 (75%)
Query: 14 PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
PPDL S L RI Y+GMS VP+V EL++AE LYL YE AEKP Y+Y+NS G+
Sbjct: 101 PPDLPSLLLNARICYIGMSLVPAVTELVVAELLYLGYEQAEKPCYVYINSGGS 153
>gi|412990638|emb|CCO18010.1| predicted protein [Bathycoccus prasinos]
Length = 386
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/53 (62%), Positives = 40/53 (75%)
Query: 14 PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
PPDL S L RI Y+GMS VP+V EL++AE LYL YE AEKP YLY++S G+
Sbjct: 160 PPDLPSLLLNARICYIGMSLVPAVTELVVAELLYLGYEQAEKPAYLYIHSAGS 212
>gi|357132342|ref|XP_003567789.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic-like [Brachypodium distachyon]
Length = 390
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 15 PDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
PDL S L +RI++LGM VP+V ELI A+FL+L Y+D KPIYLY+NSTGT +
Sbjct: 165 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMD 218
>gi|255573147|ref|XP_002527503.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223533143|gb|EEF34901.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 308
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/53 (62%), Positives = 42/53 (79%)
Query: 14 PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
PPDL S L RI YLGM VP+V EL++A+F+YL Y+D+ KPIYLY+NS+GT
Sbjct: 88 PPDLPSLLLDARICYLGMPIVPAVTELLVAQFMYLDYDDSSKPIYLYINSSGT 140
>gi|452825129|gb|EME32127.1| ATP-dependent Clp protease, protease subunit isoform 1 [Galdieria
sulphuraria]
gi|452825130|gb|EME32128.1| ATP-dependent Clp protease, protease subunit isoform 2 [Galdieria
sulphuraria]
Length = 275
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 39/44 (88%)
Query: 24 NRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
NRI+YLGM +P+V ELI+AEFLYLQYE EKPIYLY+NSTGT+
Sbjct: 85 NRIIYLGMPLLPAVTELIIAEFLYLQYESGEKPIYLYINSTGTS 128
>gi|326505514|dbj|BAJ95428.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 15 PDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
PDL S L +RI++LGM VP+V ELI A+FL+L Y+D KPIYLY+NSTGT +
Sbjct: 162 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMD 215
>gi|255639455|gb|ACU20022.1| unknown [Glycine max]
Length = 364
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/53 (60%), Positives = 41/53 (77%)
Query: 14 PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
PPDL S L RI YLGM VP+V ELI+A+F++L Y++ KPIYLY+NS+GT
Sbjct: 149 PPDLPSLLLDARICYLGMPIVPAVTELIVAQFMWLDYDNPSKPIYLYINSSGT 201
>gi|356536107|ref|XP_003536581.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic-like [Glycine max]
Length = 372
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/53 (60%), Positives = 41/53 (77%)
Query: 14 PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
PPDL S L RI YLGM VP+V ELI+A+F++L Y++ KPIYLY+NS+GT
Sbjct: 149 PPDLPSLLLDARICYLGMPIVPAVTELIVAQFMWLDYDNPSKPIYLYINSSGT 201
>gi|218197363|gb|EEC79790.1| hypothetical protein OsI_21214 [Oryza sativa Indica Group]
Length = 386
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 15 PDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
PDL S L +RI++LGM VP+V ELI A+FL+L Y+D KPIYLY+NSTGT +
Sbjct: 161 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMD 214
>gi|428202894|ref|YP_007081483.1| protease subunit of ATP-dependent protease [Pleurocapsa sp. PCC
7327]
gi|427980326|gb|AFY77926.1| protease subunit of ATP-dependent protease [Pleurocapsa sp. PCC
7327]
Length = 228
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 10/72 (13%)
Query: 6 SGTAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEK 55
S ++ PPPDL S L K RIVYLGM S V +LI+A+ L+LQ++DAEK
Sbjct: 14 SDVSYRTPPPDLESLLLKERIVYLGMPLFSSDDVKQQVGIDVTQLIIAQLLFLQFDDAEK 73
Query: 56 PIYLYLNSTGTT 67
PIY Y+NSTGT+
Sbjct: 74 PIYFYINSTGTS 85
>gi|115465787|ref|NP_001056493.1| Os05g0592100 [Oryza sativa Japonica Group]
gi|48475230|gb|AAT44299.1| unknown protein [Oryza sativa Japonica Group]
gi|113580044|dbj|BAF18407.1| Os05g0592100 [Oryza sativa Japonica Group]
gi|215701013|dbj|BAG92437.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632764|gb|EEE64896.1| hypothetical protein OsJ_19755 [Oryza sativa Japonica Group]
Length = 386
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 15 PDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
PDL S L +RI++LGM VP+V ELI A+FL+L Y+D KPIYLY+NSTGT +
Sbjct: 161 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMD 214
>gi|194706198|gb|ACF87183.1| unknown [Zea mays]
Length = 301
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 15 PDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
PDL S L +RI++LGM VP+V ELI A+FL+L Y+D KPIYLY+NSTGT +
Sbjct: 76 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMD 129
>gi|356575728|ref|XP_003555989.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic-like [Glycine max]
Length = 372
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/53 (60%), Positives = 41/53 (77%)
Query: 14 PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
PPDL S L RI YLGM VP+V ELI+A+F++L Y++ KPIYLY+NS+GT
Sbjct: 149 PPDLPSLLLDARICYLGMPIVPAVTELIVAQFMWLDYDNPTKPIYLYINSSGT 201
>gi|384252076|gb|EIE25553.1| hypothetical protein COCSUDRAFT_46762 [Coccomyxa subellipsoidea
C-169]
Length = 216
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 56/81 (69%)
Query: 2 IPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYL 61
+P G A EQ PPDL SYL+K RIVYLGMS VP+V EL+LAE LYLQY++ +PI++Y+
Sbjct: 1 MPQLQGDATEQTPPDLPSYLFKERIVYLGMSLVPAVTELLLAELLYLQYDNPTRPIFMYI 60
Query: 62 NSTGTTEVGSFLCHALVFFQI 82
NS G + G L + F I
Sbjct: 61 NSAGVQKGGDKLGYESEAFAI 81
>gi|307108088|gb|EFN56329.1| hypothetical protein CHLNCDRAFT_144777 [Chlorella variabilis]
Length = 315
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/43 (74%), Positives = 37/43 (86%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
RIVYLGM VP+V ELI+AE LYLQY+D KP+YLY+NSTGTT
Sbjct: 100 RIVYLGMPLVPAVTELIIAEMLYLQYKDRTKPMYLYINSTGTT 142
>gi|242091575|ref|XP_002441620.1| hypothetical protein SORBIDRAFT_09g030550 [Sorghum bicolor]
gi|241946905|gb|EES20050.1| hypothetical protein SORBIDRAFT_09g030550 [Sorghum bicolor]
Length = 388
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 15 PDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
PDL S L +RI++LGM VP+V ELI A+FL+L Y+D KPIYLY+NSTGT +
Sbjct: 163 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMD 216
>gi|226529349|ref|NP_001141859.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|194689706|gb|ACF78937.1| unknown [Zea mays]
gi|413946719|gb|AFW79368.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 388
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 15 PDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
PDL S L +RI++LGM VP+V ELI A+FL+L Y+D KPIYLY+NSTGT +
Sbjct: 163 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMD 216
>gi|195650193|gb|ACG44564.1| endopeptidase Clp [Zea mays]
Length = 388
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 15 PDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
PDL S L +RI++LGM VP+V ELI A+FL+L Y+D KPIYLY+NSTGT +
Sbjct: 163 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMD 216
>gi|254421954|ref|ZP_05035672.1| Clp protease [Synechococcus sp. PCC 7335]
gi|196189443|gb|EDX84407.1| Clp protease [Synechococcus sp. PCC 7335]
Length = 230
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 11/76 (14%)
Query: 3 PFTSGTA-WEQPPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYE 51
P+ G+A + PPPDL S L K RIVYLG V S V +LI+A+ LYL+++
Sbjct: 11 PYGGGSAAYRTPPPDLQSLLLKERIVYLGTPLVSSDDFKRQMGVDVTKLIIAQLLYLEFD 70
Query: 52 DAEKPIYLYLNSTGTT 67
D EKPIY Y+NSTGT+
Sbjct: 71 DPEKPIYFYINSTGTS 86
>gi|428224314|ref|YP_007108411.1| endopeptidase Clp [Geitlerinema sp. PCC 7407]
gi|427984215|gb|AFY65359.1| Endopeptidase Clp [Geitlerinema sp. PCC 7407]
Length = 237
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 38/45 (84%)
Query: 23 KNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLGM VP+V ELI+AE LYLQYED EKPI +Y+NSTGT+
Sbjct: 49 KERIVYLGMPLVPAVTELIIAELLYLQYEDPEKPIRIYINSTGTS 93
>gi|168026989|ref|XP_001766013.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682656|gb|EDQ69072.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 348
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Query: 7 GTAWEQP---PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNS 63
G+A +P PPDL S L RI YLGM+ VP+V ELI+AE L+L +++ KPIY Y+NS
Sbjct: 115 GSAGGRPKTAPPDLPSLLLDARICYLGMAIVPAVTELIIAELLWLDFDNPSKPIYFYINS 174
Query: 64 TGT 66
+GT
Sbjct: 175 SGT 177
>gi|22299302|ref|NP_682549.1| ATP-dependent Clp protease-like protein [Thermosynechococcus
elongatus BP-1]
gi|22295485|dbj|BAC09311.1| ATP-dependent Clp protease proteolytic subunit 3
[Thermosynechococcus elongatus BP-1]
Length = 218
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 38/46 (82%)
Query: 23 KNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
K RIVYLGM VP+V ELI+AE LYLQY+D EKPI +Y+NSTGT+
Sbjct: 31 KERIVYLGMPLVPAVTELIIAELLYLQYDDPEKPIRIYINSTGTSR 76
>gi|168061571|ref|XP_001782761.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665734|gb|EDQ52408.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 391
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Query: 7 GTAWEQP---PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNS 63
G+A +P PPDL S L RI YLGM+ VP+V ELI+AE L+L +++ KPIY Y+NS
Sbjct: 158 GSAGGRPKTAPPDLPSLLLDARICYLGMAIVPAVTELIIAELLWLDFDNPTKPIYFYINS 217
Query: 64 TGT 66
+GT
Sbjct: 218 SGT 220
>gi|16331161|ref|NP_441889.1| ATP-dependent Clp protease-like-protein [Synechocystis sp. PCC
6803]
gi|383322903|ref|YP_005383756.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|383326072|ref|YP_005386925.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|383491956|ref|YP_005409632.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|384437224|ref|YP_005651948.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|451815317|ref|YP_007451769.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|18202351|sp|P74466.1|CLPR_SYNY3 RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit-like; AltName: Full=Endopeptidase Clp-like
gi|1653655|dbj|BAA18567.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|339274256|dbj|BAK50743.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|359272222|dbj|BAL29741.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|359275392|dbj|BAL32910.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|359278562|dbj|BAL36079.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|407961462|dbj|BAM54702.1| ATP-dependent Clp protease-like-protein [Bacillus subtilis
BEST7613]
gi|451781286|gb|AGF52255.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
Length = 225
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 10/69 (14%)
Query: 9 AWEQPPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIY 58
A++ PPPDL S L K RIVYLGM S V +LI+A+ LYLQ++D +KPIY
Sbjct: 15 AFKTPPPDLESLLLKERIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIY 74
Query: 59 LYLNSTGTT 67
Y+NSTGT+
Sbjct: 75 FYINSTGTS 83
>gi|225428973|ref|XP_002264383.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic [Vitis vinifera]
gi|296083061|emb|CBI22465.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/53 (58%), Positives = 41/53 (77%)
Query: 14 PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
PPDL S L RI YLGM VP+V EL++A+F++L +++ KPIYLY+NSTGT
Sbjct: 167 PPDLPSLLLDARICYLGMPIVPAVAELLVAQFMWLDFDNPSKPIYLYINSTGT 219
>gi|2342674|gb|AAB70396.1| Similar to ATP-dependent Clp protease (gb|D90915). EST gb|N65461
comes from this gene [Arabidopsis thaliana]
Length = 292
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 9/74 (12%)
Query: 13 PPPDLASYLYKNRIVYLGM---------SFVPSVRELILAEFLYLQYEDAEKPIYLYLNS 63
PPPDL S L RIVY+GM VP+V EL++AE +YLQ+ D ++PIY+Y+NS
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPTDDDIFCFQLVPAVTELVVAELMYLQWLDPKEPIYIYINS 177
Query: 64 TGTTEVGSFLCHAL 77
TGTT H +
Sbjct: 178 TGTTRDDGETVHTV 191
>gi|388520115|gb|AFK48119.1| unknown [Medicago truncatula]
Length = 373
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 14 PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
PPDL S L +RI YLGM VP+V ELILA+ ++L Y++ KP+Y+Y+NS+GT
Sbjct: 153 PPDLPSLLLDSRICYLGMPIVPAVTELILAQLMWLDYDNPAKPVYVYINSSGT 205
>gi|302807086|ref|XP_002985274.1| hypothetical protein SELMODRAFT_424284 [Selaginella moellendorffii]
gi|300147102|gb|EFJ13768.1| hypothetical protein SELMODRAFT_424284 [Selaginella moellendorffii]
Length = 357
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/53 (60%), Positives = 41/53 (77%)
Query: 14 PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
PPDL S L RIVYLGM+ VP+V ELI+AE L+L +++ KPIYLY+N +GT
Sbjct: 134 PPDLPSLLLDARIVYLGMAIVPAVTELIVAEMLFLDFDNPSKPIYLYINCSGT 186
>gi|357444423|ref|XP_003592489.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|355481537|gb|AES62740.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
Length = 373
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 14 PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
PPDL S L +RI YLGM VP+V ELILA+ ++L Y++ KP+Y+Y+NS+GT
Sbjct: 153 PPDLPSLLLDSRICYLGMPIVPAVTELILAQLMWLDYDNPAKPVYVYINSSGT 205
>gi|18402863|ref|NP_564560.1| ATP-dependent Clp protease proteolytic subunit-related protein 1
[Arabidopsis thaliana]
gi|75315328|sp|Q9XJ35.1|CLPR1_ARATH RecName: Full=ATP-dependent Clp protease proteolytic
subunit-related protein 1, chloroplastic; Short=ClpR1;
AltName: Full=nClpP5; Flags: Precursor
gi|8569101|gb|AAF76446.1|AC015445_13 Identical to nClpP5 from Arabidopsis thaliana gb|AB022330 and
contains prenyltransferase PF|00432 and CLP protease
PF|00574 domains. ESTs gb|H76908, gb|AA605567,
gb|T21932, gb|T22976 come from this gene [Arabidopsis
thaliana]
gi|5360595|dbj|BAA82069.1| nClpP5 [Arabidopsis thaliana]
gi|15010752|gb|AAK74035.1| At1g49970/F2J10_5 [Arabidopsis thaliana]
gi|23308343|gb|AAN18141.1| At1g49970/F2J10_5 [Arabidopsis thaliana]
gi|332194380|gb|AEE32501.1| ATP-dependent Clp protease proteolytic subunit-related protein 1
[Arabidopsis thaliana]
Length = 387
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 3/59 (5%)
Query: 11 EQP---PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
E+P PPDL S L RI YLGM VP+V EL++A+F++L Y++ KPIYLY+NS GT
Sbjct: 163 ERPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGT 221
>gi|425470395|ref|ZP_18849265.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9701]
gi|389883996|emb|CCI35667.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9701]
Length = 228
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 10/69 (14%)
Query: 9 AWEQPPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIY 58
A+ PPPDL S L K RIVYLG+ S V ELI+A+ LYLQ++D EKPI+
Sbjct: 17 AYRTPPPDLESLLLKERIVYLGLPLFSSDDVKRNVGVDVTELIIAQLLYLQFDDPEKPIF 76
Query: 59 LYLNSTGTT 67
Y+NSTGT+
Sbjct: 77 FYINSTGTS 85
>gi|166368460|ref|YP_001660733.1| ATP-dependent Clp protease-like protein [Microcystis aeruginosa
NIES-843]
gi|390438072|ref|ZP_10226570.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis sp. T1-4]
gi|422301332|ref|ZP_16388700.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9806]
gi|425442639|ref|ZP_18822880.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9717]
gi|425447771|ref|ZP_18827753.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9443]
gi|425455949|ref|ZP_18835660.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9807]
gi|425462516|ref|ZP_18841990.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9808]
gi|425465072|ref|ZP_18844382.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9809]
gi|443664108|ref|ZP_21133358.1| clp protease family protein [Microcystis aeruginosa DIANCHI905]
gi|159028169|emb|CAO89776.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|166090833|dbj|BAG05541.1| ATP-dependent Clp protease proteolytic subunit [Microcystis
aeruginosa NIES-843]
gi|389716258|emb|CCH99491.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9717]
gi|389731600|emb|CCI04365.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9443]
gi|389792300|emb|CCI11971.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9806]
gi|389803099|emb|CCI17965.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9807]
gi|389824417|emb|CCI26623.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9808]
gi|389832762|emb|CCI23366.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9809]
gi|389838472|emb|CCI30694.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis sp. T1-4]
gi|443331651|gb|ELS46297.1| clp protease family protein [Microcystis aeruginosa DIANCHI905]
Length = 228
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 10/69 (14%)
Query: 9 AWEQPPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIY 58
A+ PPPDL S L K RIVYLG+ S V ELI+A+ LYLQ++D EKPI+
Sbjct: 17 AYRTPPPDLESLLLKERIVYLGLPLFSSDDVKRNVGVDVTELIIAQLLYLQFDDPEKPIF 76
Query: 59 LYLNSTGTT 67
Y+NSTGT+
Sbjct: 77 FYINSTGTS 85
>gi|425436519|ref|ZP_18816954.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9432]
gi|425450003|ref|ZP_18829835.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 7941]
gi|440752717|ref|ZP_20931920.1| clp protease family protein [Microcystis aeruginosa TAIHU98]
gi|389678720|emb|CCH92423.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9432]
gi|389769364|emb|CCI05783.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 7941]
gi|440177210|gb|ELP56483.1| clp protease family protein [Microcystis aeruginosa TAIHU98]
Length = 228
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 10/69 (14%)
Query: 9 AWEQPPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIY 58
A+ PPPDL S L K RIVYLG+ S V ELI+A+ LYLQ++D EKPI+
Sbjct: 17 AYRTPPPDLESLLLKERIVYLGLPLFSSDDVKRNIGVDVTELIIAQLLYLQFDDPEKPIF 76
Query: 59 LYLNSTGTT 67
Y+NSTGT+
Sbjct: 77 FYINSTGTS 85
>gi|297852688|ref|XP_002894225.1| hypothetical protein ARALYDRAFT_891918 [Arabidopsis lyrata subsp.
lyrata]
gi|297340067|gb|EFH70484.1| hypothetical protein ARALYDRAFT_891918 [Arabidopsis lyrata subsp.
lyrata]
Length = 387
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 3/59 (5%)
Query: 11 EQP---PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
E+P PPDL S L RI YLGM VP+V EL++A+F++L Y++ KPIYLY+NS GT
Sbjct: 163 ERPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGT 221
>gi|300869049|ref|ZP_07113651.1| ATP-dependent Clp protease-like protein [Oscillatoria sp. PCC
6506]
gi|300332960|emb|CBN58845.1| ATP-dependent Clp protease-like protein [Oscillatoria sp. PCC
6506]
Length = 222
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 44/68 (64%), Gaps = 10/68 (14%)
Query: 10 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYL 59
+ PPPDL S L K RIVYLGM S V ELI+A+ LYLQ++D EKPIY
Sbjct: 11 YRTPPPDLESLLLKERIVYLGMPLFSSDEIKRNVGIDVTELIIAQLLYLQFDDPEKPIYF 70
Query: 60 YLNSTGTT 67
Y+NS+GT+
Sbjct: 71 YINSSGTS 78
>gi|218245804|ref|YP_002371175.1| ATP-dependent Clp protease-like protein [Cyanothece sp. PCC 8801]
gi|257058850|ref|YP_003136738.1| ATP-dependent Clp protease-like protein [Cyanothece sp. PCC 8802]
gi|16506759|gb|AAL23932.1|AF423176_1 hypothetical protein [Cyanothece sp. PCC 8801]
gi|218166282|gb|ACK65019.1| Endopeptidase Clp [Cyanothece sp. PCC 8801]
gi|256589016|gb|ACU99902.1| Endopeptidase Clp [Cyanothece sp. PCC 8802]
Length = 226
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 10/70 (14%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPI 57
T++ PPPDL S + K RI+YLGM S V +LI+A+ LYLQ++D +KPI
Sbjct: 14 TSFRTPPPDLESLMLKERIIYLGMPLFSSDDVKQQVGIDVTQLIIAQLLYLQFDDPDKPI 73
Query: 58 YLYLNSTGTT 67
Y Y+NSTGT+
Sbjct: 74 YFYINSTGTS 83
>gi|86608098|ref|YP_476860.1| ATP-dependent Clp protease-like protein [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556640|gb|ABD01597.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 211
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 6 SGTAWEQPPPDLASYLYKNRIVYLGMSFV----PSVRELILAEFLYLQYEDAEKPIYLYL 61
G PPPDLAS L + RIVYLG+ +V +LI+ + LYLQYED EKPI +Y+
Sbjct: 10 GGAPVRTPPPDLASLLLQERIVYLGLPLAEESNANVTKLIIEQLLYLQYEDREKPIKMYI 69
Query: 62 NSTGT 66
NSTGT
Sbjct: 70 NSTGT 74
>gi|302773329|ref|XP_002970082.1| hypothetical protein SELMODRAFT_65351 [Selaginella moellendorffii]
gi|300162593|gb|EFJ29206.1| hypothetical protein SELMODRAFT_65351 [Selaginella moellendorffii]
Length = 300
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 41/53 (77%)
Query: 14 PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
PPDL S L RIVYLGM+ VP+V ELI+AE L+L +++ KPIYLY+N +GT
Sbjct: 113 PPDLPSLLLDARIVYLGMAIVPAVTELIVAEMLFLDFDNPSKPIYLYINCSGT 165
>gi|86605370|ref|YP_474133.1| ATP-dependent Clp protease-like protein [Synechococcus sp.
JA-3-3Ab]
gi|86553912|gb|ABC98870.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. JA-3-3Ab]
Length = 210
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 6 SGTAWEQPPPDLASYLYKNRIVYLGMSFV----PSVRELILAEFLYLQYEDAEKPIYLYL 61
G PPPDLAS L + RIVYLG+ +V +LI+ + LYLQYED EKPI +Y+
Sbjct: 9 GGAPVRTPPPDLASLLLQERIVYLGLPLAEEANANVTKLIVEQLLYLQYEDREKPIKMYI 68
Query: 62 NSTGT 66
NSTGT
Sbjct: 69 NSTGT 73
>gi|384251987|gb|EIE25464.1| hypothetical protein COCSUDRAFT_52875 [Coccomyxa subellipsoidea
C-169]
Length = 221
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 36/44 (81%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
RI YLGM VP+V ELI+AE LYLQY+D KPIYLY+NSTGTT
Sbjct: 23 RITYLGMPLVPAVTELIIAELLYLQYKDRTKPIYLYINSTGTTR 66
>gi|148910727|gb|ABR18430.1| unknown [Picea sitchensis]
Length = 393
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 39/53 (73%)
Query: 14 PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
PPDL S L RI+YLGM VP+V EL++AE ++L Y++ KPIY Y+NS GT
Sbjct: 171 PPDLPSLLLDARILYLGMPIVPAVTELLIAELMWLDYDNPSKPIYFYINSPGT 223
>gi|148906385|gb|ABR16347.1| unknown [Picea sitchensis]
Length = 393
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 39/53 (73%)
Query: 14 PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
PPDL S L RI+YLGM VP+V EL++AE ++L Y++ KPIY Y+NS GT
Sbjct: 171 PPDLPSLLLDARILYLGMPIVPAVTELLIAELMWLDYDNPSKPIYFYINSPGT 223
>gi|220906938|ref|YP_002482249.1| ATP-dependent Clp protease-like protein [Cyanothece sp. PCC 7425]
gi|219863549|gb|ACL43888.1| Endopeptidase Clp [Cyanothece sp. PCC 7425]
Length = 218
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 38/46 (82%)
Query: 23 KNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
K RIVYLGM VP+V ELI+AE L+LQY+D EKPI +Y+NSTGT+
Sbjct: 31 KERIVYLGMPLVPAVTELIIAELLFLQYDDPEKPIKIYINSTGTSR 76
>gi|428317796|ref|YP_007115678.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria
nigro-viridis PCC 7112]
gi|428241476|gb|AFZ07262.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria
nigro-viridis PCC 7112]
Length = 219
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 23 KNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLGM VP+V ELI+AE L+LQYED +KPI +Y+NSTGT+
Sbjct: 31 KERIVYLGMPLVPAVTELIIAELLFLQYEDPDKPIKIYINSTGTS 75
>gi|298713496|emb|CBJ27051.1| ATP-dependent Clp protease proteolytic subunit [Ectocarpus
siliculosus]
Length = 323
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/44 (65%), Positives = 36/44 (81%)
Query: 24 NRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
NRIVYLGM VP+V ELI+AE LYL YE A KP+Y+Y+N+ GT+
Sbjct: 120 NRIVYLGMPLVPAVTELIIAELLYLNYESASKPVYMYINTPGTS 163
>gi|334118045|ref|ZP_08492135.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
gi|333460030|gb|EGK88640.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
Length = 219
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 23 KNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLGM VP+V ELI+AE L+LQYED +KPI +Y+NSTGT+
Sbjct: 31 KERIVYLGMPLVPAVTELIIAELLFLQYEDPDKPIKIYINSTGTS 75
>gi|414876901|tpg|DAA54032.1| TPA: hypothetical protein ZEAMMB73_875629 [Zea mays]
Length = 186
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 37/43 (86%)
Query: 31 MSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFL 73
M VPSV EL+LAEFLYLQY+DAEKPIY+Y+NSTGTT+ G L
Sbjct: 1 MCLVPSVTELMLAEFLYLQYDDAEKPIYMYINSTGTTKNGEKL 43
>gi|218439261|ref|YP_002377590.1| ATP-dependent Clp protease-like protein [Cyanothece sp. PCC 7424]
gi|218171989|gb|ACK70722.1| Endopeptidase Clp [Cyanothece sp. PCC 7424]
Length = 228
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 10/68 (14%)
Query: 10 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYL 59
+ PPPDL S L K RIVYLGM S V +LI+A+ LYLQ++D +KPIY
Sbjct: 18 FRTPPPDLESLLLKERIVYLGMPLFSSDEIKQQVGIDVTQLIIAQLLYLQFDDPDKPIYF 77
Query: 60 YLNSTGTT 67
Y+NSTGT+
Sbjct: 78 YINSTGTS 85
>gi|119493581|ref|ZP_01624245.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
gi|119452571|gb|EAW33754.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
Length = 220
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 10/75 (13%)
Query: 3 PFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYED 52
P+ + + PPPDL S L K RIVYLG+ S V ELI+A+ LYLQ++D
Sbjct: 4 PYYNDSPVRTPPPDLESLLLKERIVYLGLPLYSSDDIKRQVGIDVTELIIAQLLYLQFDD 63
Query: 53 AEKPIYLYLNSTGTT 67
+KPIY Y+NSTGT+
Sbjct: 64 PDKPIYFYINSTGTS 78
>gi|397592489|gb|EJK55685.1| hypothetical protein THAOC_24554 [Thalassiosira oceanica]
Length = 281
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 36/44 (81%)
Query: 24 NRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
NRIVY+GM VP+V EL++AE LYL YED KP+ +Y+NS+GTT
Sbjct: 66 NRIVYIGMPLVPAVTELVIAELLYLNYEDQNKPVTMYINSSGTT 109
>gi|168025572|ref|XP_001765308.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683627|gb|EDQ70036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 298
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 37/44 (84%)
Query: 24 NRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
+RIVY+GM VP+V EL++AE LYLQY D +PIY+Y+NSTGT+
Sbjct: 85 SRIVYIGMPLVPAVTELVIAELLYLQYADPRQPIYVYINSTGTS 128
>gi|427418190|ref|ZP_18908373.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
7375]
gi|425760903|gb|EKV01756.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
7375]
Length = 230
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 44/69 (63%), Gaps = 10/69 (14%)
Query: 9 AWEQPPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIY 58
A+ PPPDL S L K RIVYLG V S V LI+A+ LYL+++D +KPIY
Sbjct: 18 AFRTPPPDLQSLLLKERIVYLGTPLVSSDDYKRQMGMDVTRLIIAQLLYLEFDDPDKPIY 77
Query: 59 LYLNSTGTT 67
Y+NSTGT+
Sbjct: 78 FYINSTGTS 86
>gi|307152498|ref|YP_003887882.1| endopeptidase Clp [Cyanothece sp. PCC 7822]
gi|306982726|gb|ADN14607.1| Endopeptidase Clp [Cyanothece sp. PCC 7822]
Length = 222
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 10/69 (14%)
Query: 9 AWEQPPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIY 58
++ PPPDL S L K RIVYLGM S V +LI+A+ L+LQ++D +KPIY
Sbjct: 11 SFRTPPPDLESLLLKERIVYLGMPLFSSDDIKQQVGIDVTQLIIAQLLFLQFDDPDKPIY 70
Query: 59 LYLNSTGTT 67
Y+NSTGT+
Sbjct: 71 FYINSTGTS 79
>gi|359457307|ref|ZP_09245870.1| ATP-dependent Clp protease-like protein [Acaryochloris sp. CCMEE
5410]
Length = 228
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 10/68 (14%)
Query: 10 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYL 59
+ PPPDL S L K RIVYLGM S V ELI+A+ L+LQ++D +KPI+
Sbjct: 20 YRTPPPDLQSLLLKERIVYLGMPLFSSDDIKRQVGFDVTELIIAQLLFLQFDDPDKPIFF 79
Query: 60 YLNSTGTT 67
Y+NSTGT+
Sbjct: 80 YINSTGTS 87
>gi|158335483|ref|YP_001516655.1| ATP-dependent Clp protease-like protein [Acaryochloris marina
MBIC11017]
gi|158305724|gb|ABW27341.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Acaryochloris marina MBIC11017]
Length = 228
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 10/68 (14%)
Query: 10 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYL 59
+ PPPDL S L K RIVYLGM S V ELI+A+ L+LQ++D +KPI+
Sbjct: 20 YRTPPPDLQSLLLKERIVYLGMPLFSSDDIKRQVGFDVTELIIAQLLFLQFDDPDKPIFF 79
Query: 60 YLNSTGTT 67
Y+NSTGT+
Sbjct: 80 YINSTGTS 87
>gi|428215429|ref|YP_007088573.1| protease subunit of ATP-dependent protease [Oscillatoria
acuminata PCC 6304]
gi|428003810|gb|AFY84653.1| protease subunit of ATP-dependent protease [Oscillatoria
acuminata PCC 6304]
Length = 217
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 23 KNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLGM VP V ELI+++ LYLQY+D EKPI +Y+NSTGT+
Sbjct: 31 KERIVYLGMPLVPKVTELIISQLLYLQYDDPEKPINIYINSTGTS 75
>gi|414079204|ref|YP_007000628.1| peptidase family S14 ClpP [Anabaena sp. 90]
gi|413972483|gb|AFW96571.1| peptidase family S14 ClpP [Anabaena sp. 90]
Length = 220
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 50/65 (76%)
Query: 3 PFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLN 62
P++ +++ PPPDL S L K RIVYLGM VPSV ELI+A+ LYLQ +D EKPI +Y+N
Sbjct: 12 PYSGDSSYRTPPPDLPSLLLKERIVYLGMPLVPSVTELIVAQLLYLQSDDPEKPIKIYIN 71
Query: 63 STGTT 67
STGT+
Sbjct: 72 STGTS 76
>gi|55792477|gb|AAV65338.1| plastid catalytic subunit of ClpP5 protease [Prototheca
wickerhamii]
Length = 251
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 14 PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGS 71
PPDL S L RI Y+GM VP+V EL+++E L+L Y KP+Y+Y+NSTG+ G
Sbjct: 141 PPDLPSLLLDGRICYIGMPLVPAVTELVISELLWLNYSSPTKPVYVYINSTGSQREGG 198
>gi|168013355|ref|XP_001759365.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689295|gb|EDQ75667.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 296
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 36/43 (83%)
Query: 24 NRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
+RIVY+GM VP+V EL++AE LYLQY D +PIY+Y+NSTGT
Sbjct: 83 SRIVYIGMPLVPAVTELVIAELLYLQYADPRQPIYVYINSTGT 125
>gi|434402515|ref|YP_007145400.1| protease subunit of ATP-dependent protease [Cylindrospermum
stagnale PCC 7417]
gi|428256770|gb|AFZ22720.1| protease subunit of ATP-dependent protease [Cylindrospermum
stagnale PCC 7417]
Length = 220
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 23 KNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLGM VP+V ELI+AE LYLQ +D EKPI +Y+NSTGT+
Sbjct: 32 KERIVYLGMPLVPAVTELIVAELLYLQSDDPEKPIKIYINSTGTS 76
>gi|67921361|ref|ZP_00514879.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|416383635|ref|ZP_11684483.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
gi|67856473|gb|EAM51714.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|357265221|gb|EHJ14014.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
Length = 226
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 10/70 (14%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPI 57
T + PPPDL S L K RI+YLG+ S V +LI+A+ LYLQ+++ EKPI
Sbjct: 14 TNFRTPPPDLESLLLKERIIYLGLPLFSSDEIKQQVGIDVTQLIIAQLLYLQFDNPEKPI 73
Query: 58 YLYLNSTGTT 67
Y Y+NSTGT+
Sbjct: 74 YFYINSTGTS 83
>gi|224009932|ref|XP_002293924.1| catalytic subunit of clp protein superfamily [Thalassiosira
pseudonana CCMP1335]
gi|220970596|gb|EED88933.1| catalytic subunit of clp protein superfamily [Thalassiosira
pseudonana CCMP1335]
Length = 225
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 36/44 (81%)
Query: 24 NRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
NRIVY+GM VP+V EL++AE LYL YED KP+ +Y+NS+GTT
Sbjct: 36 NRIVYIGMPLVPAVTELVIAELLYLNYEDQSKPVTMYINSSGTT 79
>gi|356572984|ref|XP_003554645.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic-like [Glycine max]
Length = 327
Score = 67.8 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 37/43 (86%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
RIVY+GM VP+V EL++AE +YLQY D ++PIY+Y+NSTGTT
Sbjct: 125 RIVYIGMPLVPAVTELVVAELMYLQYMDPKEPIYIYINSTGTT 167
>gi|428207692|ref|YP_007092045.1| endopeptidase Clp [Chroococcidiopsis thermalis PCC 7203]
gi|428009613|gb|AFY88176.1| Endopeptidase Clp [Chroococcidiopsis thermalis PCC 7203]
Length = 219
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 23 KNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLGM VP+V ELI+AE LYLQ +D +KPI +Y+NSTGT+
Sbjct: 31 KERIVYLGMPLVPAVTELIIAELLYLQSDDPDKPIKIYINSTGTS 75
>gi|145343690|ref|XP_001416446.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144576671|gb|ABO94739.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 308
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT----EVGSFLCHALVFF 80
RIVY+GM VP+V ELI++E LYLQY D +KP Y+Y+NSTG T EV F A F
Sbjct: 108 RIVYIGMPLVPAVTELIVSELLYLQYTDQKKPCYIYINSTGCTRADGEVVGFETEATAIF 167
>gi|434393185|ref|YP_007128132.1| ATP-dependent Clp protease proteolytic subunit [Gloeocapsa sp.
PCC 7428]
gi|428265026|gb|AFZ30972.1| ATP-dependent Clp protease proteolytic subunit [Gloeocapsa sp.
PCC 7428]
Length = 219
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 23 KNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLGM VP+V EL++AE LYLQ ED +KPI +Y+NSTGT+
Sbjct: 31 KERIVYLGMPLVPAVTELLIAELLYLQSEDPDKPIRVYINSTGTS 75
>gi|427714499|ref|YP_007063123.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
6312]
gi|427378628|gb|AFY62580.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
6312]
Length = 219
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 38/46 (82%)
Query: 23 KNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
K RIVYLGM VP+V EL++A+ L+LQY+D EKPI +Y+NSTGT+
Sbjct: 31 KERIVYLGMPLVPAVTELLVAQLLFLQYDDPEKPIRIYINSTGTSR 76
>gi|255542730|ref|XP_002512428.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223548389|gb|EEF49880.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 325
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 37/43 (86%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
RIVY+GM VP+V EL++AE +YLQ+ D ++PIYLY+NSTGTT
Sbjct: 123 RIVYIGMPLVPAVTELVVAELMYLQWMDPKEPIYLYINSTGTT 165
>gi|113475005|ref|YP_721066.1| ATP-dependent Clp protease-like protein [Trichodesmium erythraeum
IMS101]
gi|110166053|gb|ABG50593.1| Endopeptidase Clp [Trichodesmium erythraeum IMS101]
Length = 229
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 10/69 (14%)
Query: 9 AWEQPPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIY 58
++ PPPDL S + K RIVYLG+ S V +LI+A+ LYLQ+++ EKPIY
Sbjct: 18 SFRTPPPDLESLMLKERIVYLGLPLFSSDEVKRNVGIDVTQLIIAQLLYLQFDNPEKPIY 77
Query: 59 LYLNSTGTT 67
Y+NSTGT+
Sbjct: 78 FYINSTGTS 86
>gi|427730533|ref|YP_007076770.1| protease subunit of ATP-dependent protease [Nostoc sp. PCC 7524]
gi|427366452|gb|AFY49173.1| protease subunit of ATP-dependent protease [Nostoc sp. PCC 7524]
Length = 220
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 23 KNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLGM VP+V ELI+A+ LYLQ +D EKPI +Y+NSTGT+
Sbjct: 32 KERIVYLGMPLVPAVTELIVAQLLYLQSDDPEKPIKIYINSTGTS 76
>gi|440684796|ref|YP_007159591.1| ATP-dependent Clp protease proteolytic subunit [Anabaena
cylindrica PCC 7122]
gi|428681915|gb|AFZ60681.1| ATP-dependent Clp protease proteolytic subunit [Anabaena
cylindrica PCC 7122]
Length = 220
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 23 KNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLGM VP+V ELI+A+ LYLQ +D EKPI +Y+NSTGT+
Sbjct: 32 KERIVYLGMPLVPAVTELIVAQLLYLQSDDPEKPIKIYINSTGTS 76
>gi|358349042|ref|XP_003638549.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|355504484|gb|AES85687.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
Length = 55
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 38/59 (64%), Gaps = 13/59 (22%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
I F+ GTAWEQPP DLASYLYKNRIVYLGM FLYLQ++D + P L
Sbjct: 10 AIRFSRGTAWEQPPQDLASYLYKNRIVYLGM-------------FLYLQFDDEKNPFIL 55
>gi|428221048|ref|YP_007105218.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
7502]
gi|427994388|gb|AFY73083.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
7502]
Length = 215
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 23 KNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
K RIVY+G+ V +V ELI AE LYLQYED +KPIY+Y+NSTGT
Sbjct: 28 KERIVYIGLPLVAAVTELITAELLYLQYEDPDKPIYIYINSTGT 71
>gi|427707094|ref|YP_007049471.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7107]
gi|427359599|gb|AFY42321.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7107]
Length = 220
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 23 KNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLGM VP+V ELI+A+ LYLQ +D EKPI +Y+NSTGT+
Sbjct: 32 KERIVYLGMPLVPAVTELIVAQLLYLQSDDPEKPIKIYINSTGTS 76
>gi|172036825|ref|YP_001803326.1| ATP-dependent Clp protease-like protein [Cyanothece sp. ATCC
51142]
gi|354554634|ref|ZP_08973938.1| Endopeptidase Clp [Cyanothece sp. ATCC 51472]
gi|171698279|gb|ACB51260.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|353553443|gb|EHC22835.1| Endopeptidase Clp [Cyanothece sp. ATCC 51472]
Length = 226
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 10/68 (14%)
Query: 10 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYL 59
+ PPPDL S L K RI+YLG+ S V +LI+A+ LYLQ+++ EKPIY
Sbjct: 16 FRTPPPDLESLLLKERIIYLGLPLFSSDEIKQQVGIDVTQLIIAQLLYLQFDNPEKPIYF 75
Query: 60 YLNSTGTT 67
Y+NSTGT+
Sbjct: 76 YINSTGTS 83
>gi|308800244|ref|XP_003074903.1| ClpP2 Clp protease proteolytic subunit, probable (IC) [Ostreococcus
tauri]
gi|119358826|emb|CAL52171.2| ClpP2 Clp protease proteolytic subunit, probable (IC) [Ostreococcus
tauri]
Length = 297
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
RIVY+GM VP+V ELI++E LYLQY D +KP Y+Y+NSTG T
Sbjct: 97 RIVYIGMPLVPAVTELIVSELLYLQYADQKKPCYIYINSTGCT 139
>gi|17231850|ref|NP_488398.1| ATP-dependent Clp protease-like protein [Nostoc sp. PCC 7120]
gi|17133494|dbj|BAB76057.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
Length = 220
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%)
Query: 23 KNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLGM VP+V ELI+A+ LYLQ +D +KPI +Y+NSTGT+
Sbjct: 32 KERIVYLGMPLVPAVTELIVAQLLYLQSDDPDKPIKIYINSTGTS 76
>gi|75907529|ref|YP_321825.1| ATP-dependent Clp protease-like protein [Anabaena variabilis ATCC
29413]
gi|75701254|gb|ABA20930.1| Peptidase S14, ClpP [Anabaena variabilis ATCC 29413]
Length = 220
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%)
Query: 23 KNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLGM VP+V ELI+A+ LYLQ +D +KPI +Y+NSTGT+
Sbjct: 32 KERIVYLGMPLVPAVTELIVAQLLYLQSDDPDKPIKIYINSTGTS 76
>gi|428313412|ref|YP_007124389.1| protease subunit of ATP-dependent protease [Microcoleus sp. PCC
7113]
gi|428255024|gb|AFZ20983.1| protease subunit of ATP-dependent protease [Microcoleus sp. PCC
7113]
Length = 231
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 37/44 (84%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
RIVYLGM VP+V +LI+AE L+LQY+D +KPI +Y+NSTGT+
Sbjct: 46 RIVYLGMPLVPAVTQLIIAELLFLQYQDPDKPIKIYVNSTGTSR 89
>gi|186681466|ref|YP_001864662.1| ATP-dependent Clp protease-like protein [Nostoc punctiforme PCC
73102]
gi|186463918|gb|ACC79719.1| peptidase S14, ClpP [Nostoc punctiforme PCC 73102]
Length = 220
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%)
Query: 23 KNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVY+GM VP+V ELI+AE L+LQ +D EKPI +Y+NSTGT+
Sbjct: 32 KERIVYIGMPLVPAVTELIVAELLFLQSDDPEKPIKIYINSTGTS 76
>gi|449438329|ref|XP_004136941.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic-like [Cucumis sativus]
Length = 381
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 41/53 (77%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
DL + L RI+YLGM VP+V ELI+A+F++L Y++ KPIYLY+NS+GT +
Sbjct: 158 DLPTLLLDARIIYLGMPIVPAVTELIVAQFMWLDYDNPTKPIYLYINSSGTQD 210
>gi|449478766|ref|XP_004155413.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic-like [Cucumis sativus]
Length = 381
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 41/53 (77%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
DL + L RI+YLGM VP+V ELI+A+F++L Y++ KPIYLY+NS+GT +
Sbjct: 158 DLPTLLLDARIIYLGMPIVPAVTELIVAQFMWLDYDNPTKPIYLYINSSGTQD 210
>gi|116073335|ref|ZP_01470597.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
gi|116068640|gb|EAU74392.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
Length = 221
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 10/74 (13%)
Query: 4 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDA 53
+ T PPPDL S + K RIVYLG+ V ELI+A+ LYL++++
Sbjct: 8 YGDSTVLRTPPPDLPSLMLKERIVYLGLPLFSDDDTKRQLGLDVTELIIAQLLYLEFDNP 67
Query: 54 EKPIYLYLNSTGTT 67
EKPIY Y+NSTGT+
Sbjct: 68 EKPIYFYINSTGTS 81
>gi|282896314|ref|ZP_06304336.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281198810|gb|EFA73689.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 229
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 10/68 (14%)
Query: 10 WEQPPPDLASYLYKNRIVYLGMSFVP----------SVRELILAEFLYLQYEDAEKPIYL 59
+ PPPDLAS L K RIVYLG V V +LI+A+ LYL++++ EKPI+
Sbjct: 19 YRTPPPDLASLLLKERIVYLGTPLVSPDEYKRQMGVDVTKLIIAQLLYLKFDNPEKPIFF 78
Query: 60 YLNSTGTT 67
Y+NSTGT+
Sbjct: 79 YINSTGTS 86
>gi|422295344|gb|EKU22643.1| atp-dependent clp protease proteolytic subunit [Nannochloropsis
gaditana CCMP526]
Length = 310
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 36/44 (81%)
Query: 24 NRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
NRIVYLGM+ VP+V ELI+AE LYL YE ++PIY+Y+NS G +
Sbjct: 89 NRIVYLGMALVPAVTELIIAELLYLNYESQDRPIYMYINSPGIS 132
>gi|332706286|ref|ZP_08426353.1| protease subunit of ATP-dependent Clp protease [Moorea producens
3L]
gi|332354934|gb|EGJ34407.1| protease subunit of ATP-dependent Clp protease [Moorea producens
3L]
Length = 281
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/43 (67%), Positives = 36/43 (83%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
RIVYLGM V +V ELI+AE LYLQY+D +KPI +Y+NSTGT+
Sbjct: 96 RIVYLGMPLVSAVTELIIAELLYLQYDDPDKPIKIYINSTGTS 138
>gi|284929272|ref|YP_003421794.1| protease subunit of ATP-dependent protease [cyanobacterium
UCYN-A]
gi|284809716|gb|ADB95413.1| protease subunit of ATP-dependent protease [cyanobacterium
UCYN-A]
Length = 226
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 10/68 (14%)
Query: 10 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYL 59
+ PPPDL S L K RI+YLG+ S V +LI+A+ LYLQ+++ +KPI+
Sbjct: 16 FRTPPPDLESLLLKERIIYLGLPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDNPDKPIFF 75
Query: 60 YLNSTGTT 67
Y+NSTGT+
Sbjct: 76 YINSTGTS 83
>gi|384247124|gb|EIE20612.1| hypothetical protein COCSUDRAFT_10544, partial [Coccomyxa
subellipsoidea C-169]
Length = 228
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%)
Query: 7 GTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
G A Q PPDL S L RI Y+GM VP+V ELI++E L+L + EKP+Y+Y++S G+
Sbjct: 1 GAAPGQAPPDLPSLLLDGRICYIGMPLVPAVTELIISELLWLNFSYPEKPVYVYIHSIGS 60
>gi|303274128|ref|XP_003056387.1| ATP-dependent clp protease [Micromonas pusilla CCMP1545]
gi|226462471|gb|EEH59763.1| ATP-dependent clp protease [Micromonas pusilla CCMP1545]
Length = 294
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 34/41 (82%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
RIVY+GM VP+V ELI++E LY+QY DA +P Y+Y+NSTG
Sbjct: 87 RIVYIGMPLVPAVTELIVSELLYMQYTDATRPCYIYINSTG 127
>gi|282900570|ref|ZP_06308512.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281194370|gb|EFA69325.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 229
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 10/68 (14%)
Query: 10 WEQPPPDLASYLYKNRIVYLGMSFVP----------SVRELILAEFLYLQYEDAEKPIYL 59
+ PPPDLAS L K RIVYLG V V +LI+A+ LYL++++ +KPI+
Sbjct: 19 YRTPPPDLASLLLKERIVYLGTPLVSPDEYKRQMGVDVTKLIIAQLLYLKFDNPDKPIFF 78
Query: 60 YLNSTGTT 67
Y+NSTGT+
Sbjct: 79 YINSTGTS 86
>gi|302795281|ref|XP_002979404.1| hypothetical protein SELMODRAFT_153292 [Selaginella
moellendorffii]
gi|300153172|gb|EFJ19812.1| hypothetical protein SELMODRAFT_153292 [Selaginella
moellendorffii]
Length = 243
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 24 NRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEV 69
+RIVY+GM VP+V EL++AE LYLQY D PIY+Y+NSTGT+
Sbjct: 30 SRIVYVGMPLVPAVTELVIAELLYLQYSDPTLPIYMYINSTGTSRA 75
>gi|428671728|gb|EKX72643.1| conserved hypothetical protein [Babesia equi]
Length = 199
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
TA E+ PPDL S L RIV++G+ P+V L++++ LYL Y+ AEKPI +Y+N+ +
Sbjct: 6 TARERKPPDLNSLLLSERIVFIGLPIQPTVAHLVISQLLYLDYDSAEKPIKIYINTDDS 64
>gi|302817400|ref|XP_002990376.1| hypothetical protein SELMODRAFT_131372 [Selaginella
moellendorffii]
gi|302825342|ref|XP_002994294.1| hypothetical protein SELMODRAFT_138455 [Selaginella
moellendorffii]
gi|300137825|gb|EFJ04638.1| hypothetical protein SELMODRAFT_138455 [Selaginella
moellendorffii]
gi|300141938|gb|EFJ08645.1| hypothetical protein SELMODRAFT_131372 [Selaginella
moellendorffii]
Length = 235
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 24 NRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEV 69
+RIVY+GM VP+V EL++AE LYLQY D PIY+Y+NSTGT+
Sbjct: 22 SRIVYVGMPLVPAVTELVIAELLYLQYSDPTLPIYMYINSTGTSRA 67
>gi|254409400|ref|ZP_05023181.1| Clp protease [Coleofasciculus chthonoplastes PCC 7420]
gi|196183397|gb|EDX78380.1| Clp protease [Coleofasciculus chthonoplastes PCC 7420]
Length = 223
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 36/44 (81%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
RIVYLG+ VP V ELI+AE LYLQY++ +KPI +Y+NSTGT+
Sbjct: 38 RIVYLGLPLVPQVTELIVAELLYLQYDNPDKPIKIYINSTGTSR 81
>gi|449454073|ref|XP_004144780.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic-like [Cucumis sativus]
gi|449490882|ref|XP_004158737.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic-like [Cucumis sativus]
Length = 331
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/43 (60%), Positives = 37/43 (86%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
RIVY+GM VP+V EL++A+ +YLQ+ D ++P+YLY+NSTGTT
Sbjct: 128 RIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTT 170
>gi|126657895|ref|ZP_01729048.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
gi|126620835|gb|EAZ91551.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
Length = 226
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 10/68 (14%)
Query: 10 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYL 59
+ PPPDL S L K RI+YLG+ S V +LI+A+ LYLQ+++ +KPI+
Sbjct: 16 FRTPPPDLESLLLKERIIYLGLPLFSSDEIKQQVGIDVTQLIIAQLLYLQFDNPDKPIFF 75
Query: 60 YLNSTGTT 67
Y+NSTGT+
Sbjct: 76 YINSTGTS 83
>gi|449019594|dbj|BAM82996.1| ATP-dependent Clp protease proteolytic subunit [Cyanidioschyzon
merolae strain 10D]
Length = 288
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 24 NRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
NRIVY+GM V ELI+AE LYL Y D +KP+Y+Y+NSTGT
Sbjct: 99 NRIVYIGMPLTAPVCELIIAELLYLNYNDPDKPVYVYINSTGT 141
>gi|225450774|ref|XP_002279451.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic [Vitis vinifera]
gi|296089701|emb|CBI39520.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/43 (58%), Positives = 36/43 (83%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
RIVY+GM VP+V EL++AE +YLQ+ D ++P+Y+Y+N TGTT
Sbjct: 120 RIVYIGMPLVPAVTELVIAELMYLQWMDPKEPVYVYINCTGTT 162
>gi|87125531|ref|ZP_01081376.1| ATP-dependent Clp protease proteolytic subunit 4 [Synechococcus
sp. RS9917]
gi|86166831|gb|EAQ68093.1| ATP-dependent Clp protease proteolytic subunit 4 [Synechococcus
sp. RS9917]
Length = 211
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 10/65 (15%)
Query: 13 PPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLN 62
PPPDL S + K RIVYLG+ V ELI+A+ LYL++++ +KPIY Y+N
Sbjct: 4 PPPDLPSLMLKERIVYLGLPLFSDDDTKRQLGLDVTELIIAQLLYLEFDNPDKPIYFYIN 63
Query: 63 STGTT 67
STGT+
Sbjct: 64 STGTS 68
>gi|224284192|gb|ACN39832.1| unknown [Picea sitchensis]
Length = 327
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 37/44 (84%)
Query: 24 NRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
+RI+++GM VP+V EL++AEFLYLQ+ D +P Y+Y+NSTGT+
Sbjct: 114 SRIIFIGMPLVPAVTELVIAEFLYLQWLDPRQPTYVYINSTGTS 157
>gi|224284163|gb|ACN39818.1| unknown [Picea sitchensis]
Length = 327
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 37/44 (84%)
Query: 24 NRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
+RI+++GM VP+V EL++AEFLYLQ+ D +P Y+Y+NSTGT+
Sbjct: 114 SRIIFIGMPLVPAVTELVIAEFLYLQWLDPRQPTYVYINSTGTS 157
>gi|427721126|ref|YP_007069120.1| ATP-dependent Clp protease proteolytic subunit [Calothrix sp. PCC
7507]
gi|427353562|gb|AFY36286.1| ATP-dependent Clp protease proteolytic subunit [Calothrix sp. PCC
7507]
Length = 220
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 23 KNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLGM V +V ELI+AE L+LQ +D +KPI +Y+NSTGT+
Sbjct: 32 KERIVYLGMPLVAAVTELIVAELLFLQSDDPDKPIKIYINSTGTS 76
>gi|219113429|ref|XP_002186298.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583148|gb|ACI65768.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 199
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 24 NRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
NRIVY+GM VP+V EL++AE LYL YE +PI +Y+NS+GT+
Sbjct: 12 NRIVYIGMPLVPAVTELVIAELLYLNYESTTEPITMYINSSGTS 55
>gi|427736766|ref|YP_007056310.1| protease subunit of ATP-dependent protease [Rivularia sp. PCC
7116]
gi|427371807|gb|AFY55763.1| protease subunit of ATP-dependent protease [Rivularia sp. PCC
7116]
Length = 221
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 23 KNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG VP V +LI+AE LYLQ ED +KPI +Y+NS GT+
Sbjct: 32 KERIVYLGAPLVPEVTKLIIAELLYLQSEDPDKPIKIYINSVGTS 76
>gi|113954996|ref|YP_729944.1| ATP-dependent Clp protease-like protein [Synechococcus sp.
CC9311]
gi|113882347|gb|ABI47305.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. CC9311]
Length = 225
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 10/65 (15%)
Query: 13 PPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLN 62
PPPDL S + K RIVYLG+ V ELI+A+ L+L++++ +KPIY Y+N
Sbjct: 21 PPPDLPSLMLKERIVYLGLPLFSDGDAKRQMGLDVTELIIAQLLFLEFDNPDKPIYFYIN 80
Query: 63 STGTT 67
STGT+
Sbjct: 81 STGTS 85
>gi|352096271|ref|ZP_08957151.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
gi|351676965|gb|EHA60116.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
Length = 225
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 10/65 (15%)
Query: 13 PPPDLASYLYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLN 62
PPPDL S + K RIVYLG+ V ELI+A+ L+L++++ +KPIY Y+N
Sbjct: 21 PPPDLPSLMLKERIVYLGLPLFSDGDTKRQLGLDVTELIIAQLLFLEFDNPDKPIYFYIN 80
Query: 63 STGTT 67
STGT+
Sbjct: 81 STGTS 85
>gi|224125178|ref|XP_002319519.1| predicted protein [Populus trichocarpa]
gi|118486796|gb|ABK95233.1| unknown [Populus trichocarpa]
gi|222857895|gb|EEE95442.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/43 (60%), Positives = 35/43 (81%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
RIVY+GM V +V EL++AE +YLQ+ D + PIY+Y+NSTGTT
Sbjct: 139 RIVYIGMPLVAAVTELVVAELMYLQWMDPKAPIYIYINSTGTT 181
>gi|357511831|ref|XP_003626204.1| ATP-dependent Clp protease proteolytic subunit-related protein
[Medicago truncatula]
gi|217074128|gb|ACJ85424.1| unknown [Medicago truncatula]
gi|355501219|gb|AES82422.1| ATP-dependent Clp protease proteolytic subunit-related protein
[Medicago truncatula]
Length = 322
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/43 (58%), Positives = 36/43 (83%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
RIVY+GM VP+V EL++AE ++LQ+ ++PIY+Y+NSTGTT
Sbjct: 119 RIVYIGMPLVPAVTELVIAELMFLQWMAPKEPIYIYINSTGTT 161
>gi|412990287|emb|CCO19605.1| ATP-dependent Clp protease-like protein [Bathycoccus prasinos]
Length = 296
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
RIVY+GM VP+V ELI++E LY+QY D K YLY+NSTG T
Sbjct: 98 RIVYIGMPLVPAVTELIVSELLYMQYTDPGKACYLYINSTGCT 140
>gi|242035789|ref|XP_002465289.1| hypothetical protein SORBIDRAFT_01g035610 [Sorghum bicolor]
gi|241919143|gb|EER92287.1| hypothetical protein SORBIDRAFT_01g035610 [Sorghum bicolor]
Length = 339
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 37/42 (88%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
RIVY+GM VP+V EL++A+ +YL++ ++++P+Y+Y+NSTGT
Sbjct: 137 RIVYIGMPLVPAVTELVVAQLMYLEWMNSKEPVYIYINSTGT 178
>gi|226505068|ref|NP_001149025.1| LOC100282645 [Zea mays]
gi|195624074|gb|ACG33867.1| ATP-dependent Clp protease proteolytic subunit-like [Zea mays]
gi|414866760|tpg|DAA45317.1| TPA: ATP-dependent Clp protease proteolytic subunit isoform 1 [Zea
mays]
gi|414866761|tpg|DAA45318.1| TPA: ATP-dependent Clp protease proteolytic subunit isoform 2 [Zea
mays]
Length = 339
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 37/42 (88%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
RIVY+GM VP+V ELI+A+ +YL++ ++++P+Y+Y+NSTGT
Sbjct: 137 RIVYIGMPLVPAVTELIVAQLMYLEWMNSKEPVYIYINSTGT 178
>gi|255070315|ref|XP_002507239.1| predicted protein [Micromonas sp. RCC299]
gi|226522514|gb|ACO68497.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 203
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 33/41 (80%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
RI+Y+GM VP+V ELI++E LY+QY D +P Y+Y+NSTG
Sbjct: 30 RIIYIGMPLVPAVTELIVSELLYMQYTDPARPCYIYINSTG 70
>gi|354567564|ref|ZP_08986733.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
gi|353542836|gb|EHC12297.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
Length = 225
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%)
Query: 23 KNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCHALVFFQI 82
K RIVYLG V +LI+AE LYLQ ED +KPI +Y+NSTGT++ S L F+
Sbjct: 32 KERIVYLGTPLFAEVTKLIIAELLYLQSEDPDKPIKIYINSTGTSDGSSGQMARLFGFET 91
Query: 83 SS 84
+
Sbjct: 92 EA 93
>gi|443310465|ref|ZP_21040116.1| protease subunit of ATP-dependent protease [Synechocystis sp. PCC
7509]
gi|442779503|gb|ELR89745.1| protease subunit of ATP-dependent protease [Synechocystis sp. PCC
7509]
Length = 228
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVP----------SVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V V ELI+A+ LYLQY+D EKPIY+Y+NSTGT+
Sbjct: 30 KERIVYLGLPLVTPDEYKQQLGVDVTELIIAQLLYLQYDDPEKPIYIYINSTGTS 84
>gi|428776589|ref|YP_007168376.1| endopeptidase Clp [Halothece sp. PCC 7418]
gi|428690868|gb|AFZ44162.1| Endopeptidase Clp [Halothece sp. PCC 7418]
Length = 228
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVP----------SVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V V ELI+A+ LYLQ+ED EKPIY+Y+NSTGT+
Sbjct: 31 KERIVYLGLPLVSPDEYKEQLGIDVTELIIAQLLYLQFEDREKPIYMYINSTGTS 85
>gi|115452971|ref|NP_001050086.1| Os03g0344900 [Oryza sativa Japonica Group]
gi|113548557|dbj|BAF12000.1| Os03g0344900 [Oryza sativa Japonica Group]
Length = 349
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 37/42 (88%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
RIVY+GM VP+V EL++A+ +YL++ ++++P+Y+Y+NSTGT
Sbjct: 139 RIVYIGMPLVPAVTELVVAQLMYLEWMNSKEPVYIYINSTGT 180
>gi|428778680|ref|YP_007170466.1| protease subunit of ATP-dependent protease [Dactylococcopsis
salina PCC 8305]
gi|428692959|gb|AFZ49109.1| protease subunit of ATP-dependent protease [Dactylococcopsis
salina PCC 8305]
Length = 228
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVP----------SVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V V ELI+A+ LYLQ+ED EKPIY+Y+NSTGT+
Sbjct: 31 KERIVYLGLPLVSPDEYKEQIGIDVTELIIAQLLYLQFEDREKPIYMYINSTGTS 85
>gi|363807834|ref|NP_001241928.1| uncharacterized protein LOC100809485 [Glycine max]
gi|255635968|gb|ACU18330.1| unknown [Glycine max]
Length = 324
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/43 (58%), Positives = 35/43 (81%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
RIVY+GM VP+V EL++AE + LQY D ++ I++Y+NSTGTT
Sbjct: 122 RIVYIGMPLVPAVTELVVAELMCLQYMDPKETIFIYINSTGTT 164
>gi|108708097|gb|ABF95892.1| ATP-dependent Clp protease proteolytic subunit, putative, expressed
[Oryza sativa Japonica Group]
gi|218192812|gb|EEC75239.1| hypothetical protein OsI_11536 [Oryza sativa Indica Group]
gi|222624913|gb|EEE59045.1| hypothetical protein OsJ_10812 [Oryza sativa Japonica Group]
Length = 341
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 37/42 (88%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
RIVY+GM VP+V EL++A+ +YL++ ++++P+Y+Y+NSTGT
Sbjct: 139 RIVYIGMPLVPAVTELVVAQLMYLEWMNSKEPVYIYINSTGT 180
>gi|428771385|ref|YP_007163175.1| ATP-dependent Clp protease proteolytic subunit [Cyanobacterium
aponinum PCC 10605]
gi|428685664|gb|AFZ55131.1| ATP-dependent Clp protease proteolytic subunit [Cyanobacterium
aponinum PCC 10605]
Length = 227
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVP----------SVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V V ELI+A+ LYLQ++D EKPIYLY+NSTGT+
Sbjct: 31 KERIVYLGLPLVSPDEYKDQLGVDVTELIIAQLLYLQFDDPEKPIYLYINSTGTS 85
>gi|302837484|ref|XP_002950301.1| hypothetical protein VOLCADRAFT_120863 [Volvox carteri f.
nagariensis]
gi|300264306|gb|EFJ48502.1| hypothetical protein VOLCADRAFT_120863 [Volvox carteri f.
nagariensis]
Length = 298
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 7/68 (10%)
Query: 10 WEQ--PPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG-- 65
W++ PPPDLA+ L+ RI+YLGM SV EL+ A+ L++ ++A PI+ Y+NSTG
Sbjct: 58 WKEAGPPPDLATRLFTERIMYLGMPIDSSVAELLTAQ-LFVLVQEAPDPIFFYINSTGIA 116
Query: 66 --TTEVGS 71
TT+ G+
Sbjct: 117 KSTTKFGN 124
>gi|108708098|gb|ABF95893.1| ATP-dependent Clp protease proteolytic subunit, putative, expressed
[Oryza sativa Japonica Group]
Length = 230
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 37/45 (82%)
Query: 24 NRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
RIVY+GM VP+V EL++A+ +YL++ ++++P+Y+Y+NSTGT
Sbjct: 138 GRIVYIGMPLVPAVTELVVAQLMYLEWMNSKEPVYIYINSTGTAR 182
>gi|388518383|gb|AFK47253.1| unknown [Medicago truncatula]
Length = 322
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/43 (55%), Positives = 35/43 (81%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
RIVY+G VP+V EL++AE ++LQ+ ++PIY+Y+NSTGTT
Sbjct: 119 RIVYIGTPLVPAVTELVIAELMFLQWMAPKEPIYIYINSTGTT 161
>gi|357112271|ref|XP_003557933.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic-like [Brachypodium distachyon]
Length = 338
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 34/42 (80%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
RIVY+GM VP+V ELI+A+ +YL + ++ +P Y+Y+NSTGT
Sbjct: 136 RIVYIGMPLVPAVTELIVAQLMYLDWTNSSEPAYIYINSTGT 177
>gi|443324641|ref|ZP_21053380.1| protease subunit of ATP-dependent protease [Xenococcus sp. PCC
7305]
gi|442795740|gb|ELS05088.1| protease subunit of ATP-dependent protease [Xenococcus sp. PCC
7305]
Length = 224
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVP----------SVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V V ELI+A+ L+LQ++D EKPIY+Y+NSTGT+
Sbjct: 27 KERIVYLGLPLVSPDEYKDQIGVDVTELIVAQLLFLQFDDPEKPIYMYINSTGTS 81
>gi|326494016|dbj|BAJ85470.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326495362|dbj|BAJ85777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511045|dbj|BAJ91870.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 337
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 34/42 (80%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
RIVY+GM VP+V ELI+A+ +YL + ++ +P Y+Y+NSTGT
Sbjct: 135 RIVYIGMPLVPAVTELIVAQLMYLDWMNSSEPAYIYINSTGT 176
>gi|302838584|ref|XP_002950850.1| hypothetical protein VOLCADRAFT_74777 [Volvox carteri f.
nagariensis]
gi|300263967|gb|EFJ48165.1| hypothetical protein VOLCADRAFT_74777 [Volvox carteri f.
nagariensis]
Length = 421
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 22 YKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
+ RIVYLGM VP+V EL++AE LYL+ + A PI + +NS+GTT
Sbjct: 59 FDQRIVYLGMPLVPAVTELMVAELLYLEKQGATLPIEMLINSSGTT 104
>gi|159464779|ref|XP_001690619.1| inactive subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
gi|158280119|gb|EDP05878.1| inactive subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
Length = 415
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 22 YKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
+ RIVYLGM VP+V EL++AE LYL+ + A PI + +NS+GTT
Sbjct: 57 FDQRIVYLGMPLVPAVTELMVAELLYLEKQGATLPIEMLINSSGTT 102
>gi|443323687|ref|ZP_21052691.1| protease subunit of ATP-dependent protease [Gloeocapsa sp. PCC
73106]
gi|442786669|gb|ELR96398.1| protease subunit of ATP-dependent protease [Gloeocapsa sp. PCC
73106]
Length = 229
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 10/59 (16%)
Query: 23 KNRIVYLGMSFVP----------SVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGS 71
K RIVYLG+ + V ELI+A+ LYLQ++D +KPIY+Y+NSTGT+ G
Sbjct: 32 KERIVYLGLPLISPDEYKDQIGIDVTELIVAQLLYLQFDDPDKPIYMYINSTGTSWYGG 90
>gi|159470091|ref|XP_001693193.1| inactive subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
gi|158277451|gb|EDP03219.1| inactive subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
Length = 276
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 7/68 (10%)
Query: 10 WEQ--PPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG-- 65
W++ PPPDLA+ L+ RI+YLGM SV EL+ A+ L++ ++A PI+ Y+NSTG
Sbjct: 36 WKEAGPPPDLATRLFSERIMYLGMPIDSSVAELLTAQ-LFVLVQEAPDPIFFYINSTGIA 94
Query: 66 --TTEVGS 71
TT+ G+
Sbjct: 95 KSTTKFGN 102
>gi|428774096|ref|YP_007165884.1| endopeptidase Clp [Cyanobacterium stanieri PCC 7202]
gi|428688375|gb|AFZ48235.1| Endopeptidase Clp [Cyanobacterium stanieri PCC 7202]
Length = 228
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVP----------SVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V V ELI+A+ L+LQ++D +KPIYLY+NSTGT+
Sbjct: 31 KERIVYLGLPLVSPDEYKDQIGIDVTELIIAQLLFLQFDDPDKPIYLYINSTGTS 85
>gi|303275766|ref|XP_003057177.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461529|gb|EEH58822.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 372
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 33/42 (78%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
RIVY+GM +P+V EL++AE L+L YE E+P Y+Y++S G+
Sbjct: 163 RIVYIGMPLLPAVTELVVAELLFLNYEQNERPGYMYIHSGGS 204
>gi|403222933|dbj|BAM41064.1| ATP-dependent Clp protease proteolytic subunit [Theileria
orientalis strain Shintoku]
Length = 764
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 4 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNS 63
+ A++ PPDL S L RIVY+G +V L++++ LYL Y+ EKPI +Y+NS
Sbjct: 1 MNNDIAYKSRPPDLPSLLLSERIVYIGYPIQQTVAHLVISQLLYLDYDSQEKPIKIYINS 60
Query: 64 TG--TTEVG 70
T E G
Sbjct: 61 DNEHTKEEG 69
>gi|443478433|ref|ZP_21068188.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena
biceps PCC 7429]
gi|443016285|gb|ELS30981.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena
biceps PCC 7429]
Length = 252
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVP----------SVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RI+Y G+ V V EL++A+ LYLQYED EKPI++Y+NSTGT+
Sbjct: 55 KERIIYFGLPLVSPDEYKQQLGVDVTELLIAQLLYLQYEDPEKPIFMYINSTGTS 109
>gi|221059998|ref|XP_002260644.1| ATP-dependent Clp protease [Plasmodium knowlesi strain H]
gi|193810718|emb|CAQ42616.1| ATP-dependent Clp protease, putative [Plasmodium knowlesi strain H]
Length = 1101
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 17 LASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCHA 76
+ S L RI++L P + E I+++ LYL+YE KPI+LY+NSTG E +
Sbjct: 70 IPSMLLSKRIIFLSSPVYPHISEQIISQLLYLEYESKRKPIHLYINSTGDLENNKIINLN 129
Query: 77 LVFFQISSINASEYI 91
+ IS I+ EYI
Sbjct: 130 GITDVISIIDVIEYI 144
>gi|170077810|ref|YP_001734448.1| ATP-dependent Clp protease-like protein [Synechococcus sp. PCC
7002]
gi|169885479|gb|ACA99192.1| Clp protease [Synechococcus sp. PCC 7002]
Length = 228
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVP----------SVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V V ELI+A+ L+LQ++D +KPIY+Y+NSTGT+
Sbjct: 32 KERIVYLGLPLVSPDEYKDQIGVDVTELIIAQLLFLQFDDPDKPIYMYINSTGTS 86
>gi|434399880|ref|YP_007133884.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
gi|428270977|gb|AFZ36918.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
Length = 228
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVP----------SVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RI+YLG+ V V ELI+A+ L+LQ++D +KPIY+Y+NSTGT+
Sbjct: 31 KERIIYLGLPLVSPDEYKDQIGIDVTELIIAQLLFLQFDDPDKPIYMYINSTGTS 85
>gi|428213615|ref|YP_007086759.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
gi|428001996|gb|AFY82839.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
Length = 201
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L ++RIV+LG + LI+A+ L+L+ EDAEK IYLY+NS G +
Sbjct: 17 DIYSRLLRDRIVFLGQQVDADLANLIVAQLLFLEAEDAEKDIYLYINSPGGS 68
>gi|427724370|ref|YP_007071647.1| ATP-dependent Clp protease proteolytic subunit [Leptolyngbya sp.
PCC 7376]
gi|427356090|gb|AFY38813.1| ATP-dependent Clp protease proteolytic subunit [Leptolyngbya sp.
PCC 7376]
Length = 230
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVP----------SVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V V ELI+A+ L+LQ++D +KPI++Y+NSTGT+
Sbjct: 33 KERIVYLGLPLVSPDEYKDQIGVDVTELIIAQLLFLQFDDPDKPIFMYINSTGTS 87
>gi|209527270|ref|ZP_03275781.1| Endopeptidase Clp [Arthrospira maxima CS-328]
gi|376003779|ref|ZP_09781582.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent
serine proteases [Arthrospira sp. PCC 8005]
gi|423066151|ref|ZP_17054941.1| hypothetical protein SPLC1_S410490 [Arthrospira platensis C1]
gi|209492337|gb|EDZ92681.1| Endopeptidase Clp [Arthrospira maxima CS-328]
gi|375327810|emb|CCE17335.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent
serine proteases [Arthrospira sp. PCC 8005]
gi|406712193|gb|EKD07382.1| hypothetical protein SPLC1_S410490 [Arthrospira platensis C1]
Length = 230
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RI+YLG V S V +LI+A+ LYLQ+ D EKPIY Y+NSTGT+
Sbjct: 32 KERIIYLGSPLVSSDDYKRQLGVDVTKLIIAQLLYLQFSDPEKPIYFYINSTGTS 86
>gi|126696837|ref|YP_001091723.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9301]
gi|126543880|gb|ABO18122.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
MIT 9301]
Length = 220
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ LYL++ED EKPIY Y+NSTGT+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFEDPEKPIYFYINSTGTS 81
>gi|78779794|ref|YP_397906.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9312]
gi|123969044|ref|YP_001009902.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. AS9601]
gi|78713293|gb|ABB50470.1| Endopeptidase Clp [Prochlorococcus marinus str. MIT 9312]
gi|123199154|gb|ABM70795.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
Length = 220
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ LYL++ED EKPIY Y+NSTGT+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFEDPEKPIYFYINSTGTS 81
>gi|157413875|ref|YP_001484741.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9215]
gi|254526964|ref|ZP_05139016.1| Clp protease [Prochlorococcus marinus str. MIT 9202]
gi|157388450|gb|ABV51155.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
MIT 9215]
gi|221538388|gb|EEE40841.1| Clp protease [Prochlorococcus marinus str. MIT 9202]
Length = 220
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ LYL++ED EKPIY Y+NSTGT+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFEDPEKPIYFYINSTGTS 81
>gi|297182365|gb|ADI18531.1| protease subunit of ATP-dependent clp proteases [uncultured
SAR406 cluster bacterium HF4000_22B16]
Length = 202
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RIV+LG S+ LI+A+FL+L+ ED +K IYLY+NS G
Sbjct: 27 DIYSRLLKERIVFLGTPIDDSISSLIIAQFLFLEAEDPDKDIYLYINSPG 76
>gi|411118655|ref|ZP_11391036.1| protease subunit of ATP-dependent protease [Oscillatoriales
cyanobacterium JSC-12]
gi|410712379|gb|EKQ69885.1| protease subunit of ATP-dependent protease [Oscillatoriales
cyanobacterium JSC-12]
Length = 228
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RI+YLG+ V S V +LI+A+ LYLQ+ D EKPI+ Y+NSTGT+
Sbjct: 30 KERIIYLGLPLVSSDDFKRQLGVDVTKLIIAQLLYLQFNDPEKPIFFYINSTGTS 84
>gi|389585617|dbj|GAB68347.1| ATP-dependent Clp protease proteolytic subunit [Plasmodium
cynomolgi strain B]
Length = 1066
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 17 LASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCHA 76
+ S L RI++L P + E I+++ LYL+YE KPI+LY+NSTG E +
Sbjct: 65 IPSMLLSKRIIFLSSPVYPHISEQIISQLLYLEYESKRKPIHLYINSTGDLENNKIINLN 124
Query: 77 LVFFQISSINASEYI 91
+ IS I+ +YI
Sbjct: 125 GITDVISIIDVIDYI 139
>gi|224007247|ref|XP_002292583.1| catalytic subunit of clp protease [Thalassiosira pseudonana
CCMP1335]
gi|220971445|gb|EED89779.1| catalytic subunit of clp protease [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 2 IPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYL 61
+P +SG W D+ + LY+ RI++LG + I+ LYL ED+ KPIYLY+
Sbjct: 12 VPGSSGGEW----VDIYNRLYRERIIFLGSEIDDELANQIIGVMLYLDEEDSTKPIYLYI 67
Query: 62 NSTGTTEVGS---FLCHALVFFQISSIN 86
NS G + + F L+ ++ +IN
Sbjct: 68 NSPGGSVISGLAIFDAMQLIKSEVITIN 95
>gi|409990520|ref|ZP_11273883.1| ATP-dependent Clp protease-like protein [Arthrospira platensis
str. Paraca]
gi|409938617|gb|EKN79918.1| ATP-dependent Clp protease-like protein [Arthrospira platensis
str. Paraca]
Length = 202
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 10/57 (17%)
Query: 21 LYKNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
L K RI+YLG V S V +LI+A+ LYLQ+ D EKPI+ Y+NSTGT+
Sbjct: 2 LLKERIIYLGSPLVSSDDYKRQLGVDVTKLIIAQLLYLQFSDPEKPIFFYINSTGTS 58
>gi|443327406|ref|ZP_21056031.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
gi|442792934|gb|ELS02396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
Length = 201
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG + L++A+ LYL+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQQVTDEISNLVVAQLLYLEAEDPEKDIYLYINSPGGS 68
>gi|88809169|ref|ZP_01124678.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
gi|88787111|gb|EAR18269.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
Length = 223
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ LYL+++D +KPIY Y+NSTGTT
Sbjct: 27 KERIVYLGLPLFSDDDTKRQVGIDVTELIIAQLLYLEFDDPDKPIYFYINSTGTT 81
>gi|410666834|ref|YP_006919205.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermacetogenium phaeum DSM 12270]
gi|409104581|gb|AFV10706.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermacetogenium phaeum DSM 12270]
Length = 201
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG SV +I+A+ L+L+ ED EK IYLY+NS G
Sbjct: 23 DIYSRLLKDRIIFLGTPIDDSVANIIIAQMLFLEAEDPEKDIYLYINSPG 72
>gi|262199481|ref|YP_003270690.1| endopeptidase Clp [Haliangium ochraceum DSM 14365]
gi|262082828|gb|ACY18797.1| Endopeptidase Clp [Haliangium ochraceum DSM 14365]
Length = 202
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV+LG V +I A+ LYL+ EDAEK I LY+NS G +
Sbjct: 26 DIYSRLLKDRIVFLGTEVNDDVANMITAQLLYLESEDAEKEIMLYINSPGGS 77
>gi|56751581|ref|YP_172282.1| ATP-dependent Clp protease-like protein [Synechococcus elongatus
PCC 6301]
gi|81301347|ref|YP_401555.1| ATP-dependent Clp protease-like protein [Synechococcus elongatus
PCC 7942]
gi|18203214|sp|Q9L4P4.1|CLPR_SYNE7 RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit-like; AltName: Full=Endopeptidase Clp-like
gi|7264063|emb|CAB81780.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|56686540|dbj|BAD79762.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81170228|gb|ABB58568.1| Endopeptidase Clp [Synechococcus elongatus PCC 7942]
Length = 228
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RI+YLGM S V ELI+A+ LYL++++ EKPIY Y+NSTGT+
Sbjct: 31 KERIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFYINSTGTS 85
>gi|156101828|ref|XP_001616607.1| ATP-dependent Clp protease proteolytic subunit [Plasmodium vivax
Sal-1]
gi|148805481|gb|EDL46880.1| ATP-dependent Clp protease proteolytic subunit, putative
[Plasmodium vivax]
Length = 1104
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 17 LASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCHA 76
+ S L RI++L P + E I+++ LYL+YE KPI+LY+NSTG E +
Sbjct: 65 IPSMLLSKRIIFLSSPVYPHISEQIISQLLYLEYESKRKPIHLYINSTGDLENNKIINLN 124
Query: 77 LVFFQISSINASEYI 91
+ IS I+ +YI
Sbjct: 125 GMTDVISIIDVIDYI 139
>gi|428209784|ref|YP_007094137.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
gi|428011705|gb|AFY90268.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
Length = 202
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + ++ LI+A+ LYL ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIIFLGQAIDSNLANLIVAQLLYLDAEDGEKDIYLYINSPGGS 68
>gi|86605879|ref|YP_474642.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. JA-3-3Ab]
gi|115311348|sp|Q2JV68.1|CLPP2_SYNJA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|86554421|gb|ABC99379.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. JA-3-3Ab]
Length = 200
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L ++RI++LG + LI+A+ LYL+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGS 68
>gi|86610014|ref|YP_478776.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|115311349|sp|Q2JIP1.1|CLPP2_SYNJB RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|86558556|gb|ABD03513.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 200
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L ++RI++LG + LI+A+ LYL+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGS 68
>gi|414161436|ref|ZP_11417696.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simulans ACS-120-V-Sch1]
gi|410876332|gb|EKS24243.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simulans ACS-120-V-Sch1]
Length = 194
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG + +V I+++ L+LQ +DAEK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGF 75
>gi|334136415|ref|ZP_08509881.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
gi|333606025|gb|EGL17373.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
Length = 197
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+++G + V L++A+ L+LQ +DAEK I++Y+NS G +
Sbjct: 19 DIYSRLLKDRIIFIGSAIDDDVANLVIAQLLFLQSQDAEKDIHVYINSPGGS 70
>gi|224475912|ref|YP_002633518.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
carnosus subsp. carnosus TM300]
gi|254763800|sp|B9DJL4.1|CLPP_STACT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|222420519|emb|CAL27333.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus carnosus subsp. carnosus TM300]
Length = 194
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG + +V I+++ L+LQ +DAEK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGF 75
>gi|428297818|ref|YP_007136124.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix
sp. PCC 6303]
gi|428234362|gb|AFZ00152.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix
sp. PCC 6303]
Length = 201
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + +V LI+A+ LYL ED+EK IY+Y+NS G +
Sbjct: 17 DIYSRLLRERILFLGQAIDSNVANLIVAQLLYLDSEDSEKDIYMYINSPGGS 68
>gi|217967475|ref|YP_002352981.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dictyoglomus turgidum DSM 6724]
gi|217336574|gb|ACK42367.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dictyoglomus turgidum DSM 6724]
Length = 194
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RIV+LG + V LI+A+ L+L+ ED EK IYLY+NS G
Sbjct: 18 DIYSRLLKSRIVFLGTTINDEVANLIVAQLLFLESEDPEKDIYLYINSPG 67
>gi|443315110|ref|ZP_21044620.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
6406]
gi|442785292|gb|ELR95122.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
6406]
Length = 230
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RI+YLG+ V + V +LI+A+ L+LQ++D +KPIY Y+NSTGT+
Sbjct: 32 KERIIYLGLPLVSADEYKRQLGVDVTKLIIAQLLFLQFDDPDKPIYFYINSTGTS 86
>gi|319891770|ref|YP_004148645.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
pseudintermedius HKU10-03]
gi|317161466|gb|ADV05009.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
pseudintermedius HKU10-03]
Length = 195
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG + +V I+++ L+LQ +DAEK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGF 75
>gi|428216584|ref|YP_007101049.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Pseudanabaena sp. PCC 7367]
gi|427988366|gb|AFY68621.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Pseudanabaena sp. PCC 7367]
Length = 197
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG +V LI+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIFSRLLRERIVFLGQQVDDTVSNLIVAQMLFLEAEDPEKDIYLYVNSPGGS 68
>gi|428775586|ref|YP_007167373.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece
sp. PCC 7418]
gi|428689865|gb|AFZ43159.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece
sp. PCC 7418]
Length = 199
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG + LI+A+ LYL+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQQVDDEIANLIVAQMLYLEAEDPEKDIYLYINSPGGS 68
>gi|386319889|ref|YP_006016052.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pseudintermedius ED99]
gi|323465060|gb|ADX77213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pseudintermedius ED99]
Length = 195
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG + +V I+++ L+LQ +DAEK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGF 75
>gi|434405726|ref|YP_007148611.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
gi|428259981|gb|AFZ25931.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
Length = 201
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG S+ LI+A+ L+L ED+EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIIFLGQQVDNSIANLIVAQLLFLDAEDSEKDIYLYINSPGGS 68
>gi|428311957|ref|YP_007122934.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
gi|428253569|gb|AFZ19528.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
Length = 202
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG + LI+A+ L+L+ EDAEK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQPVDSDLANLIVAQLLFLEAEDAEKDIYLYINSPGGS 68
>gi|73663232|ref|YP_302013.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|418576800|ref|ZP_13140932.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
gi|124013830|sp|Q49VZ2.1|CLPP_STAS1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|72495747|dbj|BAE19068.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|379324465|gb|EHY91611.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
Length = 194
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG +V I+++ L+LQ +DAEK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGF 75
>gi|291569212|dbj|BAI91484.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
Length = 230
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RI+YLG V S V +LI+A+ LYLQ+ D EKPI+ Y+NSTGT+
Sbjct: 32 KERIIYLGSPLVSSDEYKRQLGVDVTKLIIAQLLYLQFSDPEKPIFFYINSTGTS 86
>gi|392971446|ref|ZP_10336842.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Staphylococcus equorum subsp. equorum Mu2]
gi|403047222|ref|ZP_10902690.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
sp. OJ82]
gi|392510838|emb|CCI60118.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Staphylococcus equorum subsp. equorum Mu2]
gi|402762756|gb|EJX16850.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
sp. OJ82]
Length = 194
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG +V I+++ L+LQ +DAEK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGF 75
>gi|94958239|gb|ABF47251.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
xylosus]
Length = 194
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG +V I+++ L+LQ +DAEK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGF 75
>gi|300865787|ref|ZP_07110541.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
gi|300336200|emb|CBN55696.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
Length = 203
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG---TTEVGSF 72
D+ S L ++RIV+LG + LI+A+ L+L ED EK IYLY+NS G T +G F
Sbjct: 17 DIYSRLLRDRIVFLGQQVTSDLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIF 76
Query: 73 LCHALVFFQISSI 85
+ ++S+I
Sbjct: 77 DTMNHIRPEVSTI 89
>gi|404417286|ref|ZP_10999088.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
arlettae CVD059]
gi|403490299|gb|EJY95842.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
arlettae CVD059]
Length = 194
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG +V I+++ L+LQ +DAEK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGF 75
>gi|298491709|ref|YP_003721886.1| endopeptidase Clp ['Nostoc azollae' 0708]
gi|298233627|gb|ADI64763.1| Endopeptidase Clp ['Nostoc azollae' 0708]
Length = 229
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLGM V + V +LI+A+ LYL++++ EKPI+ Y+NSTGT+
Sbjct: 32 KERIVYLGMPLVSADEYKRQIGVDVTKLIIAQLLYLKFDNPEKPIFFYINSTGTS 86
>gi|206901598|ref|YP_002250810.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dictyoglomus thermophilum H-6-12]
gi|206740701|gb|ACI19759.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dictyoglomus thermophilum H-6-12]
Length = 194
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RIV+LG + V L++A+ L+L+ ED EK IYLY+NS G
Sbjct: 18 DIYSRLLKSRIVFLGTAINDEVANLVVAQLLFLESEDPEKDIYLYINSPG 67
>gi|427733872|ref|YP_007053416.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rivularia
sp. PCC 7116]
gi|427368913|gb|AFY52869.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rivularia
sp. PCC 7116]
Length = 201
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L ++RI++LG +V LI+A+ L L EDAEK IY+Y+NS G +
Sbjct: 17 DIYSRLLRDRIIFLGQPIDSNVANLIVAQMLLLDAEDAEKDIYMYINSPGGS 68
>gi|320161285|ref|YP_004174509.1| ATP-dependent Clp protease proteolytic subunit [Anaerolinea
thermophila UNI-1]
gi|319995138|dbj|BAJ63909.1| ATP-dependent Clp protease proteolytic subunit [Anaerolinea
thermophila UNI-1]
Length = 218
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 4 FTSGTAWEQPPP------DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPI 57
T+G A E P DL + L +NRI+YLG + V I+A+ L+L ED E PI
Sbjct: 18 ITNGIASEFSPAVTSGISDLNALLLRNRIIYLGTAIDDKVANNIVAQLLFLSNEDREAPI 77
Query: 58 YLYLNSTG 65
+Y+NS G
Sbjct: 78 QMYINSPG 85
>gi|398814906|ref|ZP_10573583.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Brevibacillus sp. BC25]
gi|398035724|gb|EJL28955.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Brevibacillus sp. BC25]
Length = 200
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG +V +++A+ L+LQ ED EK I+LY+NS G +
Sbjct: 21 DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPGGS 72
>gi|428319265|ref|YP_007117147.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
gi|428242945|gb|AFZ08731.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
Length = 202
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L ++RIV+LG + LI+A+ L+L ED EK IYLYLNS G +
Sbjct: 17 DIYSRLLRDRIVFLGQQVDSDLANLIVAQLLFLDAEDPEKDIYLYLNSPGGS 68
>gi|226314841|ref|YP_002774737.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
gi|226097791|dbj|BAH46233.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
Length = 198
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG +V +++A+ L+LQ ED EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPGGS 70
>gi|434387492|ref|YP_007098103.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Chamaesiphon minutus PCC 6605]
gi|428018482|gb|AFY94576.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Chamaesiphon minutus PCC 6605]
Length = 203
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L ++RIV+LG + LI+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRDRIVFLGGQVTSDLANLIVAQLLFLEAEDPEKDIYLYINSPGGS 68
>gi|428779425|ref|YP_007171211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
gi|428693704|gb|AFZ49854.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
Length = 199
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + LI+A+ LYL+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIIFLGQQVDDEIGNLIVAQMLYLEAEDPEKDIYLYINSPGGS 68
>gi|443312110|ref|ZP_21041730.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechocystis sp. PCC 7509]
gi|442777788|gb|ELR88061.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechocystis sp. PCC 7509]
Length = 202
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L + RIV+LG ++ LI+A+ L+L EDAEK I+LY+NS G GS
Sbjct: 17 DIYSRLLRERIVFLGQKVDSNLANLIVAQLLFLDAEDAEKDIFLYINSPG----GSVTAG 72
Query: 76 ALVFFQISSIN 86
+F I I
Sbjct: 73 MGIFDTIKHIR 83
>gi|399050633|ref|ZP_10740728.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Brevibacillus sp. CF112]
gi|398051596|gb|EJL43914.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Brevibacillus sp. CF112]
Length = 200
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG +V +++A+ L+LQ ED EK I+LY+NS G
Sbjct: 21 DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPG 70
>gi|409990366|ref|ZP_11273750.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis str. Paraca]
gi|291567407|dbj|BAI89679.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
gi|409938772|gb|EKN80052.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis str. Paraca]
Length = 200
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L ++RIV+LG V LI+A+ L+L ED EK IYLY+NS G
Sbjct: 17 DIYSRLLRDRIVFLGTQVNSDVANLIVAQLLFLDAEDPEKDIYLYINSPG 66
>gi|433542295|ref|ZP_20498724.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
agri BAB-2500]
gi|432186391|gb|ELK43863.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
agri BAB-2500]
Length = 198
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG +V +++A+ L+LQ ED EK I+LY+NS G
Sbjct: 19 DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPG 68
>gi|434398580|ref|YP_007132584.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
gi|428269677|gb|AFZ35618.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
Length = 200
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG + LI+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQQVDDDIANLIVAQLLFLEAEDPEKDIYLYINSPGGS 68
>gi|209523050|ref|ZP_03271607.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
gi|376001697|ref|ZP_09779556.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent
serine proteases [Arthrospira sp. PCC 8005]
gi|209496637|gb|EDZ96935.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
gi|375329926|emb|CCE15309.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent
serine proteases [Arthrospira sp. PCC 8005]
Length = 200
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L ++RIV+LG V LI+A+ L+L ED EK IYLY+NS G
Sbjct: 17 DIYSRLLRDRIVFLGTQVNSDVANLIVAQLLFLDAEDPEKDIYLYINSPG 66
>gi|317050717|ref|YP_004111833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurispirillum indicum S5]
gi|316945801|gb|ADU65277.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurispirillum indicum S5]
Length = 196
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
TA + D+ S L K+RIV+LG + +I+A+ L+L+ ED EK I+LY+NS G
Sbjct: 11 TARGERSYDIYSRLLKDRIVFLGTQIDDQISNVIIAQLLFLEAEDPEKDIFLYINSPG 68
>gi|123966707|ref|YP_001011788.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9515]
gi|123201073|gb|ABM72681.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
MIT 9515]
Length = 220
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ LYL+++D +KPIY Y+NSTGT+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFDDPDKPIYFYINSTGTS 81
>gi|423062476|ref|ZP_17051266.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis C1]
gi|406716384|gb|EKD11535.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis C1]
Length = 200
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L ++RIV+LG V LI+A+ L+L ED EK IYLY+NS G
Sbjct: 17 DIYSRLLRDRIVFLGTQVNSDVANLIVAQLLFLDAEDPEKDIYLYINSPG 66
>gi|33861869|ref|NP_893430.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|33640237|emb|CAE19772.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 220
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ LYL+++D +KPIY Y+NSTGT+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFDDPDKPIYFYINSTGTS 81
>gi|255088111|ref|XP_002505978.1| predicted protein [Micromonas sp. RCC299]
gi|226521249|gb|ACO67236.1| predicted protein [Micromonas sp. RCC299]
Length = 223
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 33/42 (78%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
RIVY+GM +P+V EL++AE L+L YE ++P Y+Y++S G+
Sbjct: 20 RIVYIGMPLLPAVTELVVAELLFLNYEQVDRPGYVYIHSPGS 61
>gi|222150769|ref|YP_002559922.1| ATP-dependent Clp protease proteolytic subunit [Macrococcus
caseolyticus JCSC5402]
gi|254763793|sp|B9EAG5.1|CLPP_MACCJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|222119891|dbj|BAH17226.1| ATP-dependent protease proteolytic subunit ClpP [Macrococcus
caseolyticus JCSC5402]
Length = 194
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+++ L+LQ +DAEK IYLY+NS G +
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGS 70
>gi|78185115|ref|YP_377550.1| ATP-dependent Clp protease-like protein [Synechococcus sp.
CC9902]
gi|78169409|gb|ABB26506.1| Endopeptidase Clp [Synechococcus sp. CC9902]
Length = 223
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ L+L+++D EKPIY Y+NSTGT+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLFLEFDDPEKPIYFYINSTGTS 81
>gi|404493314|ref|YP_006717420.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
carbinolicus DSM 2380]
gi|90183182|sp|Q3A3X5.1|CLPP_PELCD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77545370|gb|ABA88932.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
carbinolicus DSM 2380]
Length = 194
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG + V LI+A+ L+L+ ED EK I+LY+NS G
Sbjct: 19 DIFSRLLKDRIIFLGGAVDDQVANLIIAQMLFLESEDPEKEIFLYINSPG 68
>gi|116072310|ref|ZP_01469577.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
gi|116064832|gb|EAU70591.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
Length = 222
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ L+L+++D EKPIY Y+NSTGT+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLFLEFDDPEKPIYFYINSTGTS 81
>gi|414153433|ref|ZP_11409759.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411455112|emb|CCO07662.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 195
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+++G V +L++A+FL+L+ ED EK I+LY+NS G
Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHVADLVIAQFLFLEAEDPEKDIHLYINSPG 69
>gi|425449262|ref|ZP_18829103.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 7941]
gi|440753940|ref|ZP_20933142.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa TAIHU98]
gi|389764138|emb|CCI09472.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 7941]
gi|440174146|gb|ELP53515.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa TAIHU98]
Length = 200
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG + LI+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYLYINSPGGS 68
>gi|422304551|ref|ZP_16391894.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9806]
gi|425437033|ref|ZP_18817461.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9432]
gi|425446784|ref|ZP_18826783.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9443]
gi|425455241|ref|ZP_18834961.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9807]
gi|425462698|ref|ZP_18842165.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9808]
gi|443653952|ref|ZP_21131195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa DIANCHI905]
gi|159028981|emb|CAO87442.1| clpP1 [Microcystis aeruginosa PCC 7806]
gi|389678071|emb|CCH93046.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9432]
gi|389732839|emb|CCI03287.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9443]
gi|389790315|emb|CCI13820.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9806]
gi|389803899|emb|CCI17216.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9807]
gi|389824204|emb|CCI27015.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9808]
gi|443333933|gb|ELS48469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa DIANCHI905]
Length = 199
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG + LI+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYLYINSPGGS 68
>gi|166363928|ref|YP_001656201.1| ATP-dependent protease [Microcystis aeruginosa NIES-843]
gi|425467657|ref|ZP_18846936.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9809]
gi|166086301|dbj|BAG01009.1| ATP-dependent protease [Microcystis aeruginosa NIES-843]
gi|389829532|emb|CCI29086.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9809]
Length = 200
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG + LI+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYLYINSPGGS 68
>gi|70727122|ref|YP_254036.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
haemolyticus JCSC1435]
gi|124013829|sp|Q4L4J5.1|CLPP_STAHJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|68447846|dbj|BAE05430.1| clpP [Staphylococcus haemolyticus JCSC1435]
Length = 195
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG + +V I+++ L+LQ +D+EK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
>gi|390442096|ref|ZP_10230114.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis sp. T1-4]
gi|425439844|ref|ZP_18820158.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9717]
gi|425471167|ref|ZP_18850027.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9701]
gi|389719848|emb|CCH96383.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9717]
gi|389834540|emb|CCI34240.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis sp. T1-4]
gi|389882956|emb|CCI36590.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9701]
Length = 200
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG + LI+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYLYINSPGGS 68
>gi|383754373|ref|YP_005433276.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381366425|dbj|BAL83253.1| putative ATP-dependent Clp protease proteolytic subunit
[Selenomonas ruminantium subsp. lactilytica TAM6421]
Length = 203
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG SV +++A+ L+L+ ED +K IYLY+NS G
Sbjct: 19 DIYSRLLKDRIIFLGGQIDDSVANVVVAQMLFLESEDPDKDIYLYINSPG 68
>gi|228474429|ref|ZP_04059164.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis SK119]
gi|314936932|ref|ZP_07844279.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis subsp. hominis C80]
gi|418619476|ref|ZP_13182304.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis VCU122]
gi|228271788|gb|EEK13135.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis SK119]
gi|313655551|gb|EFS19296.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis subsp. hominis C80]
gi|374824522|gb|EHR88480.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis VCU122]
Length = 195
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG + +V I+++ L+LQ +D+EK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
>gi|427718283|ref|YP_007066277.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix
sp. PCC 7507]
gi|427350719|gb|AFY33443.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix
sp. PCC 7507]
Length = 201
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG S+ LI+A+ L+L +D+EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIIFLGQQVDNSIANLIVAQLLFLDADDSEKDIYLYINSPGGS 68
>gi|289551370|ref|YP_003472274.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis HKU09-01]
gi|315658877|ref|ZP_07911744.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis M23590]
gi|418415755|ref|ZP_12988958.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis ACS-027-V-Sch2]
gi|418636869|ref|ZP_13199207.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus lugdunensis VCU139]
gi|289180901|gb|ADC88146.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis HKU09-01]
gi|315496001|gb|EFU84329.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis M23590]
gi|374840430|gb|EHS03924.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus lugdunensis VCU139]
gi|410873613|gb|EKS21547.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis ACS-027-V-Sch2]
Length = 195
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG + +V I+++ L+LQ +D+EK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
>gi|113475211|ref|YP_721272.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Trichodesmium erythraeum IMS101]
gi|110166259|gb|ABG50799.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Trichodesmium erythraeum IMS101]
Length = 203
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L ++RI+YLG + + LI+ + LYL ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRDRIIYLGEAIDSELANLIVGQLLYLDSEDPEKDIYLYINSPGGS 68
>gi|218897812|ref|YP_002446223.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9842]
gi|218542547|gb|ACK94941.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9842]
Length = 193
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGF 75
>gi|30020914|ref|NP_832545.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 14579]
gi|218233818|ref|YP_002367506.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus B4264]
gi|296503329|ref|YP_003665029.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis BMB171]
gi|423586787|ref|ZP_17562874.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD045]
gi|423648679|ref|ZP_17624249.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD169]
gi|67460526|sp|Q81CH1.1|CLPP1_BACCR RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|29896467|gb|AAP09746.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 14579]
gi|218161775|gb|ACK61767.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus B4264]
gi|296324381|gb|ADH07309.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis BMB171]
gi|401230305|gb|EJR36813.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD045]
gi|401284177|gb|EJR90043.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD169]
Length = 193
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGF 75
>gi|229110239|ref|ZP_04239813.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-15]
gi|229128131|ref|ZP_04257113.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-Cer4]
gi|228655406|gb|EEL11262.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-Cer4]
gi|228673225|gb|EEL28495.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-15]
Length = 198
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK IYLY+NS G + F
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGF 80
>gi|423655583|ref|ZP_17630882.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD200]
gi|401292851|gb|EJR98505.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD200]
Length = 193
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGF 75
>gi|410726144|ref|ZP_11364388.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. Maddingley MBC34-26]
gi|410601390|gb|EKQ55905.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. Maddingley MBC34-26]
Length = 198
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
T+ + D+ S L K+RI++LG S+ LI+A+ ++L+ ED +K I+LY+NS G +
Sbjct: 11 TSRGERSYDIYSKLLKDRIIFLGEEVSDSIANLIVAQLIFLEAEDPDKDIHLYINSPGGS 70
Query: 68 EVGSF 72
F
Sbjct: 71 VTAGF 75
>gi|229085578|ref|ZP_04217813.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-44]
gi|228697726|gb|EEL50476.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-44]
Length = 198
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV +G V I+A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 24 DIYSRLLKDRIVMIGSEINDQVASSIVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 80
>gi|228908533|ref|ZP_04072373.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 200]
gi|228965727|ref|ZP_04126807.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
gi|229097304|ref|ZP_04228266.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-29]
gi|229103392|ref|ZP_04234074.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-28]
gi|229116300|ref|ZP_04245690.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-3]
gi|402559889|ref|YP_006602613.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
thuringiensis HD-771]
gi|407705214|ref|YP_006828799.1| shikimate kinase [Bacillus thuringiensis MC28]
gi|423360226|ref|ZP_17337729.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD022]
gi|423379405|ref|ZP_17356689.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG1O-2]
gi|423442452|ref|ZP_17419358.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG4X2-1]
gi|423447331|ref|ZP_17424210.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG5O-1]
gi|423465520|ref|ZP_17442288.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG6O-1]
gi|423534865|ref|ZP_17511283.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuB2-9]
gi|423539868|ref|ZP_17516259.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuB4-10]
gi|423546093|ref|ZP_17522451.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuB5-5]
gi|423562806|ref|ZP_17539082.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
MSX-A1]
gi|423616903|ref|ZP_17592737.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD115]
gi|423624105|ref|ZP_17599883.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD148]
gi|434375764|ref|YP_006610408.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
thuringiensis HD-789]
gi|228667132|gb|EEL22584.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-3]
gi|228679888|gb|EEL34083.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-28]
gi|228686115|gb|EEL40031.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-29]
gi|228793986|gb|EEM41509.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228851086|gb|EEM95900.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 200]
gi|401082316|gb|EJP90586.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD022]
gi|401131327|gb|EJQ38981.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG5O-1]
gi|401173403|gb|EJQ80615.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuB4-10]
gi|401181906|gb|EJQ89053.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuB5-5]
gi|401199780|gb|EJR06675.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
MSX-A1]
gi|401256927|gb|EJR63132.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD115]
gi|401257417|gb|EJR63616.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD148]
gi|401633053|gb|EJS50835.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG1O-2]
gi|401788541|gb|AFQ14580.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
thuringiensis HD-771]
gi|401874321|gb|AFQ26488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
thuringiensis HD-789]
gi|402414304|gb|EJV46637.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG4X2-1]
gi|402417335|gb|EJV49637.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG6O-1]
gi|402462596|gb|EJV94301.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuB2-9]
gi|407382899|gb|AFU13400.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis MC28]
Length = 193
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGF 75
>gi|225164221|ref|ZP_03726495.1| Endopeptidase Clp [Diplosphaera colitermitum TAV2]
gi|224801160|gb|EEG19482.1| Endopeptidase Clp [Diplosphaera colitermitum TAV2]
Length = 222
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
T + D+ S L K+RI+++G V +++A+ L+LQ ED +K I+LY+NS G
Sbjct: 28 TGRGERSMDIYSRLLKDRIIFIGTPIDDGVANVVIAQLLFLQMEDPKKDIHLYINSPGGV 87
Query: 68 EVGSFLCHALVFF 80
G + + F
Sbjct: 88 VTGGMAIYDTINF 100
>gi|423402513|ref|ZP_17379686.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG2X1-2]
gi|423459171|ref|ZP_17435968.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG5X2-1]
gi|423476791|ref|ZP_17453506.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG6X1-1]
gi|401144249|gb|EJQ51779.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG5X2-1]
gi|401650785|gb|EJS68354.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG2X1-2]
gi|402433098|gb|EJV65153.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG6X1-1]
Length = 193
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGF 75
>gi|228901328|ref|ZP_04065521.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 4222]
gi|228858306|gb|EEN02773.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 4222]
Length = 198
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK IYLY+NS G + F
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGF 80
>gi|222055723|ref|YP_002538085.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
daltonii FRC-32]
gi|254763790|sp|B9M0Y1.1|CLPP_GEOSF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|221565012|gb|ACM20984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
daltonii FRC-32]
Length = 199
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
T + D+ S L K+RI++LG + +V L++A+ L+L+ ED +K I+LY+NS G
Sbjct: 10 TGRGERSYDIYSRLLKDRIIFLGGAIDDTVSNLVIAQLLFLEAEDPDKDIHLYINSPG 67
>gi|423453821|ref|ZP_17430674.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG5X1-1]
gi|401136791|gb|EJQ44375.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG5X1-1]
Length = 193
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMIGSEITDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|229145364|ref|ZP_04273753.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST24]
gi|228638203|gb|EEK94644.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST24]
Length = 198
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK IYLY+NS G + F
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGF 80
>gi|373851099|ref|ZP_09593900.1| ATP-dependent Clp protease proteolytic subunit [Opitutaceae
bacterium TAV5]
gi|391228002|ref|ZP_10264209.1| protease subunit of ATP-dependent protease [Opitutaceae bacterium
TAV1]
gi|372477264|gb|EHP37273.1| ATP-dependent Clp protease proteolytic subunit [Opitutaceae
bacterium TAV5]
gi|391223495|gb|EIQ01915.1| protease subunit of ATP-dependent protease [Opitutaceae bacterium
TAV1]
Length = 208
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
T + D+ S L K+RI+++G V +++A+ L+LQ ED +K I+LY+NS G
Sbjct: 12 TGRGERSMDIYSRLLKDRIIFIGTPIDDGVANVVIAQLLFLQMEDPKKDIHLYINSPGGV 71
Query: 68 EVGSFLCHALVFF 80
G + + F
Sbjct: 72 VTGGMAIYDTINF 84
>gi|434393622|ref|YP_007128569.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa
sp. PCC 7428]
gi|428265463|gb|AFZ31409.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa
sp. PCC 7428]
Length = 202
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG ++ LI+A+ L+L ED+EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIIFLGQQIDSNLANLIVAQLLFLDAEDSEKDIYLYINSPGGS 68
>gi|334121380|ref|ZP_08495450.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
gi|333455094|gb|EGK83755.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
Length = 202
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L ++RIV+LG + LI+A+ L+L ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRDRIVFLGQQVDSDLANLIVAQLLFLDAEDPEKDIYLYINSPGGS 68
>gi|391228000|ref|ZP_10264207.1| protease subunit of ATP-dependent protease, partial [Opitutaceae
bacterium TAV1]
gi|391223493|gb|EIQ01913.1| protease subunit of ATP-dependent protease, partial [Opitutaceae
bacterium TAV1]
Length = 225
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L K+RI+++G V +++A+ L+LQ ED +K I+LY+NS G G +
Sbjct: 37 DIYSRLLKDRIIFIGTPIDDGVANVVIAQLLFLQMEDPKKDIHLYINSPGGVVTGGMAIY 96
Query: 76 ALVFF 80
+ F
Sbjct: 97 DTINF 101
>gi|307150040|ref|YP_003885424.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
gi|306980268|gb|ADN12149.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
Length = 203
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L ++RIV+LG + LI+A+ L+L+ ED +K IYLY+NS G +
Sbjct: 17 DIYSRLLRDRIVFLGQEVTNDLANLIVAQLLFLESEDPDKDIYLYINSPGGS 68
>gi|82594064|ref|XP_725269.1| Clp protease [Plasmodium yoelii yoelii 17XNL]
gi|23480207|gb|EAA16834.1| Clp protease [Plasmodium yoelii yoelii]
Length = 240
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
++ S L RI++L P + E I+++ LYL+YE KPI+LY+NSTG E +
Sbjct: 55 NIPSLLLSKRIIFLSSPIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDLENNKIVNL 114
Query: 76 ALVFFQISSINASEYI 91
+ IS I+ YI
Sbjct: 115 NGITDVISIIDVINYI 130
>gi|119512812|ref|ZP_01631880.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414]
gi|119462534|gb|EAW43503.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414]
Length = 232
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L + RI++LG + LI+A+ L+L ED+EK IYLY+NS G GS +
Sbjct: 46 DIYSRLLRERIIFLGQQVDNEIANLIVAQLLFLDSEDSEKDIYLYINSPG----GSVMAG 101
Query: 76 ALVFFQISSIN 86
+F + I
Sbjct: 102 MGIFDTMKHIR 112
>gi|319789118|ref|YP_004150751.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermovibrio ammonificans HB-1]
gi|317113620|gb|ADU96110.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermovibrio ammonificans HB-1]
Length = 200
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RIV LG V LI+A+ L+L+ ED EK IYLY+NS G
Sbjct: 24 DIYSRLLKDRIVMLGTPIDDHVANLIVAQLLFLEAEDPEKDIYLYINSPG 73
>gi|392395333|ref|YP_006431935.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390526411|gb|AFM02142.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 202
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG V LI+A+ L+L+ ED EK I+LY+NS G +
Sbjct: 20 DIYSRLLKDRIIFLGGPVTDDVANLIVAQMLFLEAEDPEKDIFLYINSPGGS 71
>gi|358051444|ref|ZP_09145643.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simiae CCM 7213]
gi|357259050|gb|EHJ08908.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simiae CCM 7213]
Length = 194
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG +V I+++ L+LQ +D+EK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
>gi|333361419|pdb|3QWD|A Chain A, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361420|pdb|3QWD|B Chain B, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361421|pdb|3QWD|C Chain C, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361422|pdb|3QWD|D Chain D, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361423|pdb|3QWD|E Chain E, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361424|pdb|3QWD|F Chain F, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361425|pdb|3QWD|G Chain G, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361426|pdb|3QWD|H Chain H, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361427|pdb|3QWD|I Chain I, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361428|pdb|3QWD|J Chain J, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361429|pdb|3QWD|K Chain K, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361430|pdb|3QWD|L Chain L, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361431|pdb|3QWD|M Chain M, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361432|pdb|3QWD|N Chain N, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|374977802|pdb|3V5E|A Chain A, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977803|pdb|3V5E|B Chain B, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977804|pdb|3V5E|C Chain C, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977805|pdb|3V5E|D Chain D, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977806|pdb|3V5E|E Chain E, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977807|pdb|3V5E|F Chain F, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977808|pdb|3V5E|G Chain G, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977809|pdb|3V5E|H Chain H, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977810|pdb|3V5E|I Chain I, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977811|pdb|3V5E|J Chain J, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977812|pdb|3V5E|K Chain K, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977813|pdb|3V5E|L Chain L, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977814|pdb|3V5E|M Chain M, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977815|pdb|3V5E|N Chain N, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
Length = 203
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG +V I+++ L+LQ +D+EK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
>gi|186686250|ref|YP_001869446.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
gi|186468702|gb|ACC84503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
Length = 203
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG ++ LI+A+ LYL ED EK IY+Y+NS G +
Sbjct: 17 DIYSRLLRERIIFLGQQVDNNIANLIVAQLLYLDAEDPEKDIYMYINSPGGS 68
>gi|242373003|ref|ZP_04818577.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W1]
gi|242349329|gb|EES40930.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W1]
Length = 195
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG +V I+++ L+LQ +D+EK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
>gi|345531825|pdb|3ST9|A Chain A, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531826|pdb|3ST9|B Chain B, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531827|pdb|3ST9|C Chain C, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531828|pdb|3ST9|D Chain D, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531829|pdb|3ST9|E Chain E, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531830|pdb|3ST9|F Chain F, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531831|pdb|3ST9|G Chain G, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531832|pdb|3STA|V Chain V, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531833|pdb|3STA|A Chain A, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531834|pdb|3STA|B Chain B, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531835|pdb|3STA|C Chain C, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531836|pdb|3STA|E Chain E, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531837|pdb|3STA|F Chain F, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531838|pdb|3STA|G Chain G, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531839|pdb|3STA|I Chain I, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531840|pdb|3STA|K Chain K, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531841|pdb|3STA|L Chain L, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531842|pdb|3STA|M Chain M, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531843|pdb|3STA|N Chain N, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531844|pdb|3STA|S Chain S, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531845|pdb|3STA|T Chain T, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
Length = 197
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG +V I+++ L+LQ +D+EK IYLY+NS G + F
Sbjct: 21 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 77
>gi|148263972|ref|YP_001230678.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
uraniireducens Rf4]
gi|189082459|sp|A5GFA0.1|CLPP_GEOUR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146397472|gb|ABQ26105.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacter
uraniireducens Rf4]
Length = 199
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RIV+LG + ++ L++A+ L+L+ ED +K I+LY+NS G
Sbjct: 18 DIYSRLLKDRIVFLGGAIDDAISNLVIAQLLFLEAEDPDKDIHLYINSPG 67
>gi|418911445|ref|ZP_13465428.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG547]
gi|377724823|gb|EHT48938.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG547]
Length = 195
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG +V I+++ L+LQ +D+EK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
>gi|27467469|ref|NP_764106.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis ATCC 12228]
gi|57866412|ref|YP_188029.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis RP62A]
gi|242242138|ref|ZP_04796583.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis W23144]
gi|251810202|ref|ZP_04824675.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BCM-HMP0060]
gi|282875651|ref|ZP_06284522.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis SK135]
gi|293368230|ref|ZP_06614859.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W2(grey)]
gi|416124873|ref|ZP_11595668.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis FRI909]
gi|417647658|ref|ZP_12297492.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU144]
gi|417656247|ref|ZP_12305934.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU028]
gi|417658376|ref|ZP_12308010.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU045]
gi|417910192|ref|ZP_12553919.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU037]
gi|417911815|ref|ZP_12555515.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU105]
gi|417914206|ref|ZP_12557859.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU109]
gi|418326030|ref|ZP_12937226.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU071]
gi|418329732|ref|ZP_12940785.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis 14.1.R1.SE]
gi|418411293|ref|ZP_12984561.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BVS058A4]
gi|418604876|ref|ZP_13168211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU041]
gi|418608483|ref|ZP_13171678.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU057]
gi|418608689|ref|ZP_13171871.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU065]
gi|418611518|ref|ZP_13174598.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU117]
gi|418614099|ref|ZP_13177086.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU118]
gi|418618003|ref|ZP_13180887.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU120]
gi|418622588|ref|ZP_13185333.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU123]
gi|418623648|ref|ZP_13186350.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU125]
gi|418626020|ref|ZP_13188648.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU126]
gi|418629665|ref|ZP_13192161.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU127]
gi|418633713|ref|ZP_13196119.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU129]
gi|418665858|ref|ZP_13227295.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU081]
gi|419768236|ref|ZP_14294368.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-250]
gi|419771145|ref|ZP_14297205.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-K]
gi|420162870|ref|ZP_14669625.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM095]
gi|420166724|ref|ZP_14673405.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM088]
gi|420167312|ref|ZP_14673973.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM087]
gi|420171404|ref|ZP_14677946.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM070]
gi|420172098|ref|ZP_14678613.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM067]
gi|420175404|ref|ZP_14681842.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM061]
gi|420176672|ref|ZP_14683079.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM057]
gi|420180409|ref|ZP_14686641.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM053]
gi|420182492|ref|ZP_14688628.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM049]
gi|420185937|ref|ZP_14692013.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM040]
gi|420187913|ref|ZP_14693928.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM039]
gi|420189984|ref|ZP_14695932.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM037]
gi|420193132|ref|ZP_14698987.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM023]
gi|420195431|ref|ZP_14701223.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM021]
gi|420197784|ref|ZP_14703505.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM020]
gi|420199727|ref|ZP_14705398.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM031]
gi|420201234|ref|ZP_14706859.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM018]
gi|420203772|ref|ZP_14709333.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM015]
gi|420206801|ref|ZP_14712306.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM008]
gi|420208208|ref|ZP_14713678.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM003]
gi|420212385|ref|ZP_14717736.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM001]
gi|420213579|ref|ZP_14718885.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05005]
gi|420216619|ref|ZP_14721823.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05001]
gi|420219555|ref|ZP_14724570.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04008]
gi|420222322|ref|ZP_14727243.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH08001]
gi|420225248|ref|ZP_14730082.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH06004]
gi|420226678|ref|ZP_14731457.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05003]
gi|420228998|ref|ZP_14733709.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04003]
gi|420231355|ref|ZP_14736007.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051668]
gi|420233994|ref|ZP_14738568.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051475]
gi|421607631|ref|ZP_16048869.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis AU12-03]
gi|38257586|sp|Q8CTE0.1|CLPP_STAES RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460168|sp|Q5HQW0.1|CLPP_STAEQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|27315012|gb|AAO04148.1|AE016745_247 ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis ATCC 12228]
gi|57637070|gb|AAW53858.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis RP62A]
gi|242234451|gb|EES36763.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis W23144]
gi|251806254|gb|EES58911.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BCM-HMP0060]
gi|281295678|gb|EFA88201.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis SK135]
gi|291317653|gb|EFE58070.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W2(grey)]
gi|319401155|gb|EFV89370.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis FRI909]
gi|329723271|gb|EGG59801.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU144]
gi|329736698|gb|EGG72963.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU028]
gi|329738003|gb|EGG74227.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU045]
gi|341651029|gb|EGS74836.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU037]
gi|341652326|gb|EGS76115.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU105]
gi|341653290|gb|EGS77061.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU109]
gi|365226941|gb|EHM68152.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU071]
gi|365229855|gb|EHM70983.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis 14.1.R1.SE]
gi|374401382|gb|EHQ72456.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU057]
gi|374403769|gb|EHQ74765.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU041]
gi|374407975|gb|EHQ78819.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU081]
gi|374409868|gb|EHQ80637.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU065]
gi|374817066|gb|EHR81256.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU120]
gi|374821672|gb|EHR85724.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU118]
gi|374822416|gb|EHR86438.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU117]
gi|374826344|gb|EHR90243.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU123]
gi|374829958|gb|EHR93749.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU125]
gi|374833196|gb|EHR96891.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU127]
gi|374834043|gb|EHR97705.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU126]
gi|374838660|gb|EHS02198.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU129]
gi|383360447|gb|EID37843.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-250]
gi|383362116|gb|EID39473.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-K]
gi|394233097|gb|EJD78707.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM088]
gi|394235867|gb|EJD81417.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM095]
gi|394238050|gb|EJD83534.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM070]
gi|394238941|gb|EJD84398.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM087]
gi|394243339|gb|EJD88705.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM061]
gi|394243569|gb|EJD88931.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM067]
gi|394250037|gb|EJD95239.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM049]
gi|394250752|gb|EJD95922.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM053]
gi|394252238|gb|EJD97276.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM057]
gi|394253029|gb|EJD98045.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM040]
gi|394255555|gb|EJE00504.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM039]
gi|394259277|gb|EJE04135.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM037]
gi|394260255|gb|EJE05070.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM023]
gi|394263226|gb|EJE07965.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM021]
gi|394265370|gb|EJE10027.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM020]
gi|394271477|gb|EJE15970.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM031]
gi|394273140|gb|EJE17575.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM018]
gi|394274354|gb|EJE18775.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM015]
gi|394276904|gb|EJE21237.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM008]
gi|394279819|gb|EJE24116.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM001]
gi|394282082|gb|EJE26294.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM003]
gi|394285155|gb|EJE29239.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05005]
gi|394288813|gb|EJE32713.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04008]
gi|394289374|gb|EJE33258.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH08001]
gi|394291646|gb|EJE35441.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05001]
gi|394293803|gb|EJE37505.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH06004]
gi|394298294|gb|EJE41871.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05003]
gi|394299681|gb|EJE43216.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04003]
gi|394302921|gb|EJE46355.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051668]
gi|394304687|gb|EJE48083.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051475]
gi|406656682|gb|EKC83083.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis AU12-03]
gi|410892837|gb|EKS40628.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BVS058A4]
Length = 194
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG +V I+++ L+LQ +D+EK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
>gi|418632534|ref|ZP_13194964.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU128]
gi|374832104|gb|EHR95824.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU128]
Length = 194
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG +V I+++ L+LQ +D+EK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
>gi|302390303|ref|YP_003826124.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermosediminibacter oceani DSM 16646]
gi|302200931|gb|ADL08501.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermosediminibacter oceani DSM 16646]
Length = 200
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV++G S+ L++A+ L+L+ ED +K IYLY+NS G +
Sbjct: 19 DIYSRLLKDRIVFIGTPIDDSIASLVIAQLLFLESEDPDKDIYLYINSPGGS 70
>gi|223043057|ref|ZP_03613105.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus capitis SK14]
gi|417905699|ref|ZP_12549498.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus capitis VCU116]
gi|222443911|gb|EEE50008.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus capitis SK14]
gi|341598593|gb|EGS41093.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus capitis VCU116]
Length = 195
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG +V I+++ L+LQ +D+EK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
>gi|196043546|ref|ZP_03110784.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB108]
gi|225864765|ref|YP_002750143.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB102]
gi|196025855|gb|EDX64524.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB108]
gi|225789001|gb|ACO29218.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB102]
Length = 193
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T + D+ S L K+RIV +G V ++A+ L+L+ EDAEK I+L
Sbjct: 3 VIPYVVEQTKLGERSYDIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFL 62
Query: 60 YLNSTGTTEVGSF 72
Y+NS G + F
Sbjct: 63 YINSPGGSTTAGF 75
>gi|15923758|ref|NP_371292.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus Mu50]
gi|15926445|ref|NP_373978.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus N315]
gi|21282459|ref|NP_645547.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MW2]
gi|49483025|ref|YP_040249.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MRSA252]
gi|49485640|ref|YP_042861.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57650109|ref|YP_185707.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus COL]
gi|82750474|ref|YP_416215.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus RF122]
gi|87161484|ref|YP_493453.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus USA300_FPR3757]
gi|88194551|ref|YP_499347.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus NCTC 8325]
gi|148267228|ref|YP_001246171.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JH9]
gi|150393277|ref|YP_001315952.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JH1]
gi|151220948|ref|YP_001331770.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156979096|ref|YP_001441355.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus Mu3]
gi|161509038|ref|YP_001574697.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|221141842|ref|ZP_03566335.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253317258|ref|ZP_04840471.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
gi|253731397|ref|ZP_04865562.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253732783|ref|ZP_04866948.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|255005559|ref|ZP_05144160.2| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257424888|ref|ZP_05601315.1| clp protease [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427556|ref|ZP_05603955.1| clp protease [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430187|ref|ZP_05606571.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 68-397]
gi|257432888|ref|ZP_05609248.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus E1410]
gi|257435792|ref|ZP_05611840.1| clp protease [Staphylococcus aureus subsp. aureus M876]
gi|257794910|ref|ZP_05643889.1| clp protease [Staphylococcus aureus A9781]
gi|258418226|ref|ZP_05682491.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Staphylococcus aureus A9763]
gi|258421524|ref|ZP_05684449.1| clp protease [Staphylococcus aureus A9719]
gi|258423417|ref|ZP_05686308.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9635]
gi|258439133|ref|ZP_05690177.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9299]
gi|258440939|ref|ZP_05690774.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Staphylococcus aureus A8115]
gi|258445769|ref|ZP_05693946.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6300]
gi|258449581|ref|ZP_05697683.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6224]
gi|258452184|ref|ZP_05700200.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5948]
gi|258453981|ref|ZP_05701953.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5937]
gi|262049552|ref|ZP_06022422.1| hypothetical protein SAD30_0974 [Staphylococcus aureus D30]
gi|262052698|ref|ZP_06024889.1| hypothetical protein SA930_1868 [Staphylococcus aureus 930918-3]
gi|269202390|ref|YP_003281659.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ED98]
gi|282895064|ref|ZP_06303285.1| Clp protease [Staphylococcus aureus A8117]
gi|282903398|ref|ZP_06311289.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus C160]
gi|282905178|ref|ZP_06313035.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908157|ref|ZP_06315988.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282910415|ref|ZP_06318219.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282913610|ref|ZP_06321399.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M899]
gi|282916110|ref|ZP_06323873.1| Clp protease [Staphylococcus aureus subsp. aureus D139]
gi|282918561|ref|ZP_06326298.1| Clp protease [Staphylococcus aureus subsp. aureus C427]
gi|282922066|ref|ZP_06329763.1| Clp protease [Staphylococcus aureus A9765]
gi|282923527|ref|ZP_06331207.1| Clp protease [Staphylococcus aureus subsp. aureus C101]
gi|282926635|ref|ZP_06334265.1| Clp protease [Staphylococcus aureus A10102]
gi|283769931|ref|ZP_06342823.1| ATP-dependent Clp protease subunit [Staphylococcus aureus subsp.
aureus H19]
gi|283957600|ref|ZP_06375053.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus A017934/97]
gi|284023791|ref|ZP_06378189.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus 132]
gi|293500653|ref|ZP_06666504.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424]
gi|293509601|ref|ZP_06668312.1| Clp protease [Staphylococcus aureus subsp. aureus M809]
gi|293524187|ref|ZP_06670874.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M1015]
gi|294850496|ref|ZP_06791225.1| Clp protease [Staphylococcus aureus A9754]
gi|295406492|ref|ZP_06816298.1| Clp protease [Staphylococcus aureus A8819]
gi|295427347|ref|ZP_06819982.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296276994|ref|ZP_06859501.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MR1]
gi|297208504|ref|ZP_06924933.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|297245218|ref|ZP_06929092.1| Clp protease [Staphylococcus aureus A8796]
gi|297590298|ref|ZP_06948937.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MN8]
gi|300912596|ref|ZP_07130039.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH70]
gi|304381609|ref|ZP_07364259.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|379014058|ref|YP_005290294.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VC40]
gi|379020540|ref|YP_005297202.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus M013]
gi|379795239|ref|YP_005325237.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MSHR1132]
gi|384547051|ref|YP_005736304.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ED133]
gi|384549630|ref|YP_005738882.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JKD6159]
gi|384861436|ref|YP_005744156.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|384864093|ref|YP_005749452.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|384868298|ref|YP_005748494.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH60]
gi|384869354|ref|YP_005752068.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus T0131]
gi|385781094|ref|YP_005757265.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 11819-97]
gi|386728536|ref|YP_006194919.1| ATP-dependent endopeptidase clp proteolytic subunit
[Staphylococcus aureus subsp. aureus 71193]
gi|386830410|ref|YP_006237064.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus HO 5096 0412]
gi|387142462|ref|YP_005730855.1| putative ATP-dependent Clp protease proteolyticsubunit
[Staphylococcus aureus subsp. aureus TW20]
gi|387149931|ref|YP_005741495.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 04-02981]
gi|387602124|ref|YP_005733645.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ST398]
gi|387779903|ref|YP_005754701.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus LGA251]
gi|404478169|ref|YP_006709599.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 08BA02176]
gi|415683595|ref|ZP_11448811.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp.
aureus CGS00]
gi|415689458|ref|ZP_11452760.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp.
aureus CGS01]
gi|415693848|ref|ZP_11455519.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp.
aureus CGS03]
gi|416842650|ref|ZP_11905104.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O11]
gi|416847874|ref|ZP_11907423.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O46]
gi|417650451|ref|ZP_12300222.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21189]
gi|417652532|ref|ZP_12302279.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21172]
gi|417655183|ref|ZP_12304897.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21193]
gi|417796631|ref|ZP_12443837.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21305]
gi|417798637|ref|ZP_12445797.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21310]
gi|417802514|ref|ZP_12449572.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21318]
gi|417887242|ref|ZP_12531375.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21195]
gi|417890528|ref|ZP_12534601.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21200]
gi|417892365|ref|ZP_12536415.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21201]
gi|417896583|ref|ZP_12540529.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21235]
gi|417898150|ref|ZP_12542074.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21259]
gi|417902321|ref|ZP_12546188.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21266]
gi|417904583|ref|ZP_12548405.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21269]
gi|418280847|ref|ZP_12893672.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21178]
gi|418283166|ref|ZP_12895922.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21202]
gi|418284347|ref|ZP_12897073.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21209]
gi|418308841|ref|ZP_12920432.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21194]
gi|418309577|ref|ZP_12921131.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21331]
gi|418313751|ref|ZP_12925236.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21334]
gi|418315200|ref|ZP_12926664.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21340]
gi|418318354|ref|ZP_12929759.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21232]
gi|418322160|ref|ZP_12933497.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus VCU006]
gi|418423914|ref|ZP_12997054.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS1]
gi|418426888|ref|ZP_12999909.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS2]
gi|418429820|ref|ZP_13002744.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS3a]
gi|418432714|ref|ZP_13005507.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS4]
gi|418436430|ref|ZP_13008239.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS5]
gi|418439328|ref|ZP_13011043.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS6]
gi|418442304|ref|ZP_13013916.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS7]
gi|418445435|ref|ZP_13016920.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS8]
gi|418448373|ref|ZP_13019772.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS9]
gi|418451192|ref|ZP_13022531.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS10]
gi|418454216|ref|ZP_13025483.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11a]
gi|418457120|ref|ZP_13028329.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11b]
gi|418561062|ref|ZP_13125562.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21252]
gi|418561317|ref|ZP_13125809.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21262]
gi|418565775|ref|ZP_13130170.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21264]
gi|418566869|ref|ZP_13131236.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21272]
gi|418570534|ref|ZP_13134800.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21283]
gi|418574077|ref|ZP_13138254.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21333]
gi|418578667|ref|ZP_13142762.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1114]
gi|418581482|ref|ZP_13145563.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1605]
gi|418595736|ref|ZP_13159333.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21342]
gi|418598777|ref|ZP_13162284.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21343]
gi|418601712|ref|ZP_13165128.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21345]
gi|418639487|ref|ZP_13201734.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-3]
gi|418640943|ref|ZP_13203159.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-24]
gi|418644345|ref|ZP_13206491.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-55]
gi|418647139|ref|ZP_13209218.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-88]
gi|418650986|ref|ZP_13212997.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-91]
gi|418654288|ref|ZP_13216201.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-99]
gi|418656309|ref|ZP_13218123.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-105]
gi|418657987|ref|ZP_13219735.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-111]
gi|418660942|ref|ZP_13222548.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-122]
gi|418872430|ref|ZP_13426769.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-125]
gi|418874789|ref|ZP_13429055.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC93]
gi|418877613|ref|ZP_13431852.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1165]
gi|418880473|ref|ZP_13434693.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1213]
gi|418883398|ref|ZP_13437597.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1769]
gi|418886060|ref|ZP_13440210.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1150]
gi|418888666|ref|ZP_13442802.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1524]
gi|418891410|ref|ZP_13445527.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1176]
gi|418894225|ref|ZP_13448326.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1057]
gi|418897185|ref|ZP_13451258.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|418900155|ref|ZP_13454214.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1214]
gi|418903043|ref|ZP_13457084.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1770]
gi|418904859|ref|ZP_13458888.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|418908561|ref|ZP_13462569.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG149]
gi|418913957|ref|ZP_13467929.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|418916633|ref|ZP_13470594.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1267]
gi|418919641|ref|ZP_13473584.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC348]
gi|418922437|ref|ZP_13476354.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1233]
gi|418925006|ref|ZP_13478909.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG2018]
gi|418928091|ref|ZP_13481977.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1612]
gi|418930802|ref|ZP_13484650.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1750]
gi|418933703|ref|ZP_13487527.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC128]
gi|418948897|ref|ZP_13501177.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-157]
gi|418949913|ref|ZP_13502132.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-160]
gi|418952635|ref|ZP_13504651.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-189]
gi|418979235|ref|ZP_13527032.1| ClpP [Staphylococcus aureus subsp. aureus DR10]
gi|418981671|ref|ZP_13529386.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1242]
gi|418985309|ref|ZP_13532998.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1500]
gi|418987671|ref|ZP_13535344.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1835]
gi|418990658|ref|ZP_13538319.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1096]
gi|418993481|ref|ZP_13541118.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG290]
gi|419775511|ref|ZP_14301450.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CO-23]
gi|419785631|ref|ZP_14311382.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-M]
gi|421149542|ref|ZP_15609200.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newbould 305]
gi|422744913|ref|ZP_16798868.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA177]
gi|422746628|ref|ZP_16800559.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA131]
gi|424770820|ref|ZP_18198002.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CM05]
gi|424784626|ref|ZP_18211436.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus CN79]
gi|440708128|ref|ZP_20888804.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21282]
gi|440734249|ref|ZP_20913861.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus DSM 20231]
gi|443637771|ref|ZP_21121839.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21236]
gi|443640354|ref|ZP_21124345.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21196]
gi|448741163|ref|ZP_21723134.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/314250]
gi|448745335|ref|ZP_21727190.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/Y21]
gi|54036854|sp|P63786.1|CLPP_STAAW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|54036862|sp|P99089.1|CLPP_STAAN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|54040892|sp|P63785.1|CLPP_STAAM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56748671|sp|Q6GB62.1|CLPP_STAAS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56748685|sp|Q6GIM3.1|CLPP_STAAR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460165|sp|Q5HHQ0.1|CLPP_STAAC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183185|sp|Q2YSF8.1|CLPP_STAAB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243169|sp|Q2G036.1|CLPP_STAA8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|124013828|sp|Q2FIM5.1|CLPP_STAA3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214713|sp|A7WZR9.1|CLPP_STAA1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|172048797|sp|A6QF76.1|CLPP_STAAE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082468|sp|A6TZP7.1|CLPP_STAA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082469|sp|A5IQX2.1|CLPP_STAA9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082470|sp|A8Z045.1|CLPP_STAAT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|13700659|dbj|BAB41956.1| clpP [Staphylococcus aureus subsp. aureus N315]
gi|14246537|dbj|BAB56930.1| ATP-dependent Clp protease proteolytic subunit homologue
[Staphylococcus aureus subsp. aureus Mu50]
gi|21203896|dbj|BAB94595.1| clpP [Staphylococcus aureus subsp. aureus MW2]
gi|49241154|emb|CAG39832.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MRSA252]
gi|49244083|emb|CAG42509.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MSSA476]
gi|57284295|gb|AAW36389.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus COL]
gi|82656005|emb|CAI80410.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus RF122]
gi|87127458|gb|ABD21972.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87202109|gb|ABD29919.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|147740297|gb|ABQ48595.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus JH9]
gi|149945729|gb|ABR51665.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus JH1]
gi|150373748|dbj|BAF67008.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156721231|dbj|BAF77648.1| ATP-dependent Clp protease proteolytic subunit homologue
[Staphylococcus aureus subsp. aureus Mu3]
gi|160367847|gb|ABX28818.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253724847|gb|EES93576.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253729257|gb|EES97986.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|257272458|gb|EEV04581.1| clp protease [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275749|gb|EEV07222.1| clp protease [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279384|gb|EEV09985.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 68-397]
gi|257282303|gb|EEV12438.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus E1410]
gi|257284983|gb|EEV15102.1| clp protease [Staphylococcus aureus subsp. aureus M876]
gi|257788882|gb|EEV27222.1| clp protease [Staphylococcus aureus A9781]
gi|257839019|gb|EEV63498.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Staphylococcus aureus A9763]
gi|257842450|gb|EEV66874.1| clp protease [Staphylococcus aureus A9719]
gi|257846478|gb|EEV70501.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9635]
gi|257847705|gb|EEV71702.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9299]
gi|257852453|gb|EEV76374.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Staphylococcus aureus A8115]
gi|257855345|gb|EEV78283.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6300]
gi|257857089|gb|EEV79988.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6224]
gi|257860399|gb|EEV83231.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5948]
gi|257863846|gb|EEV86602.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5937]
gi|259159395|gb|EEW44448.1| hypothetical protein SA930_1868 [Staphylococcus aureus 930918-3]
gi|259162388|gb|EEW46960.1| hypothetical protein SAD30_0974 [Staphylococcus aureus D30]
gi|262074680|gb|ACY10653.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ED98]
gi|269940345|emb|CBI48722.1| putative ATP-dependent Clp protease proteolyticsubunit
[Staphylococcus aureus subsp. aureus TW20]
gi|282314395|gb|EFB44785.1| Clp protease [Staphylococcus aureus subsp. aureus C101]
gi|282317695|gb|EFB48067.1| Clp protease [Staphylococcus aureus subsp. aureus C427]
gi|282320058|gb|EFB50405.1| Clp protease [Staphylococcus aureus subsp. aureus D139]
gi|282322642|gb|EFB52964.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M899]
gi|282325807|gb|EFB56115.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282327822|gb|EFB58104.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282331585|gb|EFB61097.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus Btn1260]
gi|282591528|gb|EFB96600.1| Clp protease [Staphylococcus aureus A10102]
gi|282593724|gb|EFB98716.1| Clp protease [Staphylococcus aureus A9765]
gi|282596353|gb|EFC01314.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus C160]
gi|282762560|gb|EFC02699.1| Clp protease [Staphylococcus aureus A8117]
gi|283460078|gb|EFC07168.1| ATP-dependent Clp protease subunit [Staphylococcus aureus subsp.
aureus H19]
gi|283470062|emb|CAQ49273.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ST398]
gi|283791051|gb|EFC29866.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus A017934/97]
gi|285816470|gb|ADC36957.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 04-02981]
gi|290921150|gb|EFD98211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M1015]
gi|291095658|gb|EFE25919.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424]
gi|291467698|gb|EFF10213.1| Clp protease [Staphylococcus aureus subsp. aureus M809]
gi|294822634|gb|EFG39074.1| Clp protease [Staphylococcus aureus A9754]
gi|294968637|gb|EFG44660.1| Clp protease [Staphylococcus aureus A8819]
gi|295128735|gb|EFG58366.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296886759|gb|EFH25663.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|297177889|gb|EFH37138.1| Clp protease [Staphylococcus aureus A8796]
gi|297576597|gb|EFH95312.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MN8]
gi|298694101|gb|ADI97323.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ED133]
gi|300886842|gb|EFK82044.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH70]
gi|302332479|gb|ADL22672.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus JKD6159]
gi|302750665|gb|ADL64842.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|304339972|gb|EFM05916.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312438803|gb|ADQ77874.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH60]
gi|312829260|emb|CBX34102.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129024|gb|EFT85021.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp.
aureus CGS03]
gi|315194387|gb|EFU24779.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp.
aureus CGS00]
gi|315196246|gb|EFU26600.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp.
aureus CGS01]
gi|320139896|gb|EFW31757.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA131]
gi|320142013|gb|EFW33841.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA177]
gi|323438624|gb|EGA96368.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O11]
gi|323441949|gb|EGA99586.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O46]
gi|329313489|gb|AEB87902.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus T0131]
gi|329723806|gb|EGG60334.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21189]
gi|329724642|gb|EGG61149.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21172]
gi|329729644|gb|EGG66045.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21193]
gi|334268522|gb|EGL86960.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21305]
gi|334274514|gb|EGL92832.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21318]
gi|334275498|gb|EGL93787.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21310]
gi|341840549|gb|EGS82052.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21235]
gi|341843411|gb|EGS84638.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21266]
gi|341846489|gb|EGS87681.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21269]
gi|341849148|gb|EGS90299.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21259]
gi|341854663|gb|EGS95529.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21200]
gi|341857827|gb|EGS98637.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21201]
gi|341858295|gb|EGS99092.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21195]
gi|344177005|emb|CCC87469.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus LGA251]
gi|356872229|emb|CCE58568.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MSHR1132]
gi|359829849|gb|AEV77827.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus M013]
gi|364522083|gb|AEW64833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 11819-97]
gi|365167418|gb|EHM58883.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21178]
gi|365168239|gb|EHM59592.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21202]
gi|365173650|gb|EHM64138.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21209]
gi|365223769|gb|EHM65044.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus VCU006]
gi|365235450|gb|EHM76369.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21334]
gi|365236874|gb|EHM77752.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21194]
gi|365238910|gb|EHM79738.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21331]
gi|365243223|gb|EHM83909.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21232]
gi|365243830|gb|EHM84498.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21340]
gi|371970171|gb|EHO87601.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21252]
gi|371972686|gb|EHO90060.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21264]
gi|371977662|gb|EHO94925.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21262]
gi|371980174|gb|EHO97388.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21333]
gi|371983433|gb|EHP00577.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21272]
gi|371983904|gb|EHP01037.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21283]
gi|374362755|gb|AEZ36860.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VC40]
gi|374397523|gb|EHQ68732.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21345]
gi|374398927|gb|EHQ70079.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21343]
gi|374400646|gb|EHQ71756.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21342]
gi|375016574|gb|EHS10213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-99]
gi|375017513|gb|EHS11127.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-3]
gi|375020140|gb|EHS13681.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-24]
gi|375025890|gb|EHS19283.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-55]
gi|375026798|gb|EHS20176.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-91]
gi|375030962|gb|EHS24257.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-88]
gi|375034031|gb|EHS27209.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-105]
gi|375039561|gb|EHS32485.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-111]
gi|375039717|gb|EHS32635.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-122]
gi|375367180|gb|EHS71148.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-125]
gi|375370404|gb|EHS74213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-157]
gi|375376349|gb|EHS79884.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-189]
gi|375378040|gb|EHS81464.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-160]
gi|377696321|gb|EHT20677.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1165]
gi|377696694|gb|EHT21049.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1114]
gi|377698573|gb|EHT22921.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1057]
gi|377705237|gb|EHT29545.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1214]
gi|377707151|gb|EHT31445.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1500]
gi|377707491|gb|EHT31784.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1242]
gi|377711709|gb|EHT35938.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1605]
gi|377716064|gb|EHT40249.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1769]
gi|377716669|gb|EHT40851.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1750]
gi|377719459|gb|EHT43629.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1835]
gi|377722780|gb|EHT46905.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1096]
gi|377727358|gb|EHT51465.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1150]
gi|377732367|gb|EHT56418.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1176]
gi|377732911|gb|EHT56961.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1213]
gi|377735760|gb|EHT59790.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1233]
gi|377738003|gb|EHT62012.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1612]
gi|377742058|gb|EHT66043.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1770]
gi|377746301|gb|EHT70272.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG2018]
gi|377746640|gb|EHT70610.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG290]
gi|377751138|gb|EHT75072.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1267]
gi|377754176|gb|EHT78085.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1524]
gi|377755900|gb|EHT79798.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG149]
gi|377757459|gb|EHT81347.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|377761964|gb|EHT85833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|377766399|gb|EHT90232.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|377767166|gb|EHT90979.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC348]
gi|377771483|gb|EHT95237.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC128]
gi|377772129|gb|EHT95882.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC93]
gi|379992914|gb|EIA14363.1| ClpP [Staphylococcus aureus subsp. aureus DR10]
gi|383362393|gb|EID39746.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-M]
gi|383970734|gb|EID86827.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CO-23]
gi|384229829|gb|AFH69076.1| ClpP [Staphylococcus aureus subsp. aureus 71193]
gi|385195802|emb|CCG15411.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|387720067|gb|EIK07989.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS3a]
gi|387720500|gb|EIK08410.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS2]
gi|387722162|gb|EIK09994.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS1]
gi|387726898|gb|EIK14438.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS4]
gi|387728978|gb|EIK16450.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS5]
gi|387731240|gb|EIK18554.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS6]
gi|387737314|gb|EIK24384.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS8]
gi|387738791|gb|EIK25811.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS9]
gi|387739281|gb|EIK26289.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS7]
gi|387746356|gb|EIK33088.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS10]
gi|387746991|gb|EIK33707.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11a]
gi|387748374|gb|EIK35058.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11b]
gi|394330459|gb|EJE56551.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newbould 305]
gi|402347961|gb|EJU82967.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CM05]
gi|404439658|gb|AFR72851.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus 08BA02176]
gi|408423155|emb|CCJ10566.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408425145|emb|CCJ12532.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408427133|emb|CCJ14496.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408429120|emb|CCJ26285.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408431108|emb|CCJ18423.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408433102|emb|CCJ20387.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408435093|emb|CCJ22353.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408437078|emb|CCJ24321.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|421957225|gb|EKU09549.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus CN79]
gi|436431277|gb|ELP28630.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus DSM 20231]
gi|436505312|gb|ELP41236.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21282]
gi|443405001|gb|ELS63615.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21236]
gi|443405495|gb|ELS64098.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21196]
gi|445548141|gb|ELY16396.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/314250]
gi|445561343|gb|ELY17551.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/Y21]
Length = 195
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG +V I+++ L+LQ +D+EK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
>gi|418324661|ref|ZP_12935892.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pettenkoferi VCU012]
gi|365225160|gb|EHM66411.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pettenkoferi VCU012]
Length = 194
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG + +V I+++ L+LQ +DA+K IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDADKDIYLYINSPGGSVSAGF 75
>gi|417644372|ref|ZP_12294370.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus warneri VCU121]
gi|445060249|ref|YP_007385653.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
warneri SG1]
gi|330684877|gb|EGG96562.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU121]
gi|443426306|gb|AGC91209.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
warneri SG1]
Length = 196
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG +V I+++ L+LQ +D+EK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
>gi|314933077|ref|ZP_07840443.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus caprae C87]
gi|313654396|gb|EFS18152.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus caprae C87]
Length = 195
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG +V I+++ L+LQ +D+EK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
>gi|33862588|ref|NP_894148.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9313]
gi|124023702|ref|YP_001018009.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9303]
gi|33634504|emb|CAE20490.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
MIT 9313]
gi|123963988|gb|ABM78744.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
MIT 9303]
Length = 223
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ LYL++++ EKPIY Y+NSTGT+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFDNPEKPIYFYINSTGTS 81
>gi|374977816|pdb|3V5I|A Chain A, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977817|pdb|3V5I|B Chain B, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977818|pdb|3V5I|C Chain C, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977819|pdb|3V5I|D Chain D, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977820|pdb|3V5I|E Chain E, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977821|pdb|3V5I|F Chain F, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977822|pdb|3V5I|G Chain G, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977823|pdb|3V5I|H Chain H, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977824|pdb|3V5I|I Chain I, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977825|pdb|3V5I|J Chain J, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977826|pdb|3V5I|K Chain K, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977827|pdb|3V5I|L Chain L, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977828|pdb|3V5I|M Chain M, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977829|pdb|3V5I|N Chain N, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977830|pdb|3V5I|O Chain O, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977831|pdb|3V5I|P Chain P, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977832|pdb|3V5I|Q Chain Q, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977833|pdb|3V5I|R Chain R, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977834|pdb|3V5I|S Chain S, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977835|pdb|3V5I|T Chain T, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977836|pdb|3V5I|U Chain U, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977837|pdb|3V5I|V Chain V, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977838|pdb|3V5I|W Chain W, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977839|pdb|3V5I|X Chain X, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977840|pdb|3V5I|Y Chain Y, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977841|pdb|3V5I|Z Chain Z, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977842|pdb|3V5I|AA Chain a, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977843|pdb|3V5I|BB Chain b, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
Length = 203
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG +V I+++ L+LQ +D+EK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
>gi|260434315|ref|ZP_05788285.1| Clp protease [Synechococcus sp. WH 8109]
gi|260412189|gb|EEX05485.1| Clp protease [Synechococcus sp. WH 8109]
Length = 225
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ LYL++++ EKPIY Y+NSTGT+
Sbjct: 30 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLYLEFDNPEKPIYFYINSTGTS 84
>gi|239636619|ref|ZP_04677621.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus warneri L37603]
gi|239597974|gb|EEQ80469.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus warneri L37603]
Length = 196
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG +V I+++ L+LQ +D+EK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
>gi|291278625|ref|YP_003495460.1| ATP-dependent Clp protease proteolytic subunit [Deferribacter
desulfuricans SSM1]
gi|290753327|dbj|BAI79704.1| ATP-dependent Clp protease, proteolytic subunit [Deferribacter
desulfuricans SSM1]
Length = 195
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG + +V +++A+ L+L+ ED +K IYLY+NS G
Sbjct: 20 DIYSRLLKDRIIFLGTAIDDNVANVVIAQMLFLEAEDPDKDIYLYINSPG 69
>gi|118478148|ref|YP_895299.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
thuringiensis str. Al Hakam]
gi|118417373|gb|ABK85792.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
thuringiensis str. Al Hakam]
Length = 198
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T + D+ S L K+RIV +G V ++A+ L+L+ EDAEK I+L
Sbjct: 8 VIPYVVEQTKLGERSYDIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFL 67
Query: 60 YLNSTGTTEVGSF 72
Y+NS G + F
Sbjct: 68 YINSPGGSTTAGF 80
>gi|95930403|ref|ZP_01313139.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfuromonas acetoxidans DSM 684]
gi|95133443|gb|EAT15106.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfuromonas acetoxidans DSM 684]
Length = 196
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG + L++A+ L+L+ ED EK I+LY+NS G
Sbjct: 19 DIYSRLLKDRIIFLGGGIDDQISNLVIAQLLFLESEDPEKDIHLYINSPG 68
>gi|68071845|ref|XP_677836.1| ATP-dependent Clp protease proteolytic subunit, [Plasmodium berghei
strain ANKA]
gi|56498101|emb|CAI04312.1| ATP-dependent Clp protease proteolytic subunit, putative
[Plasmodium berghei]
Length = 239
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%)
Query: 7 GTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGT 66
+ + + S L RI++L P + E I+++ LYL+YE KPI+LY+NSTG
Sbjct: 46 NNEYSKQNISIPSLLLSKRIIFLSSPIYPHISEQIISQLLYLEYESKRKPIHLYINSTGD 105
Query: 67 TEVGSFLCHALVFFQISSINASEYI 91
E + + IS I+ YI
Sbjct: 106 LENNKIVNLNGITDVISIIDVINYI 130
>gi|414079240|ref|YP_007000664.1| peptidase family S14 ClpP [Anabaena sp. 90]
gi|413972519|gb|AFW96607.1| peptidase family S14 ClpP [Anabaena sp. 90]
Length = 201
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG ++ LI+A+ L+L EDAEK IY+Y+NS G +
Sbjct: 17 DIYSRLLRERIIFLGEQVDSNLANLIVAQLLFLDSEDAEKDIYMYINSPGGS 68
>gi|78212385|ref|YP_381164.1| ATP-dependent Clp protease-like protein [Synechococcus sp.
CC9605]
gi|78196844|gb|ABB34609.1| Endopeptidase Clp [Synechococcus sp. CC9605]
Length = 225
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ LYL++++ EKPIY Y+NSTGT+
Sbjct: 30 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLYLEFDNPEKPIYFYINSTGTS 84
>gi|397613755|gb|EJK62404.1| hypothetical protein THAOC_16984 [Thalassiosira oceanica]
Length = 289
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 2 IPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYL 61
+P +G W D+ + LY+ RI++LG + I+ LYL ED+ KPIYLY+
Sbjct: 71 VPGGAGAEW----VDIYNRLYRERIIFLGSEIDDELANQIIGVMLYLDEEDSSKPIYLYI 126
Query: 62 NSTGTTEVGSFLCHALVFFQISSINASEYI 91
NS G + + L F + SE I
Sbjct: 127 NSPGGSVIA-----GLAIFDAMQLIKSEVI 151
>gi|354566299|ref|ZP_08985472.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
gi|353546807|gb|EHC16255.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
Length = 201
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + +V LI+A+ L+L ED EK IY+Y+NS G +
Sbjct: 17 DIYSRLLRERIIFLGQAIDDNVANLIVAQLLFLDAEDPEKDIYVYINSPGGS 68
>gi|253577702|ref|ZP_04855005.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
gi|251842907|gb|EES70953.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
Length = 196
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T + D+ S L K+RIV+LG + V I+A+ L+L ED EK IY
Sbjct: 4 VIPYVIEQTGRGERSYDIYSRLLKDRIVFLGSAIDDQVANSIMAQMLFLAAEDPEKDIYF 63
Query: 60 YLNSTGTTEVGSF 72
Y+NS G + F
Sbjct: 64 YINSPGGSTSAGF 76
>gi|72382718|ref|YP_292073.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. NATL2A]
gi|72002568|gb|AAZ58370.1| endopeptidase Clp [Prochlorococcus marinus str. NATL2A]
Length = 224
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ L+L+++++EKPIY Y+NSTGT+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLFLEFDNSEKPIYFYINSTGTS 81
>gi|282898518|ref|ZP_06306508.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281196684|gb|EFA71590.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 201
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG S+ LI+A+ L+L ED EK IY+Y+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYMYINSPGGS 68
>gi|152975675|ref|YP_001375192.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cytotoxicus NVH 391-98]
gi|152024427|gb|ABS22197.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cytotoxicus NVH 391-98]
Length = 194
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 20 DIYSRLLKDRIVMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 76
>gi|423419205|ref|ZP_17396294.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG3X2-1]
gi|401105811|gb|EJQ13778.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG3X2-1]
Length = 193
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T + D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+L
Sbjct: 3 VIPYVIEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFL 62
Query: 60 YLNSTGTTEVGSF 72
Y+NS G + F
Sbjct: 63 YINSPGGSTTAGF 75
>gi|322418659|ref|YP_004197882.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
sp. M18]
gi|320125046|gb|ADW12606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
sp. M18]
Length = 199
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
T + D+ S L K+RI++LG +V L++A+ L+L+ ED +K I+LY+NS G
Sbjct: 10 TGRGERSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPG 67
>gi|228997711|ref|ZP_04157318.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock3-17]
gi|228762055|gb|EEM10994.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock3-17]
Length = 194
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 20 DIYSRLLKDRIVMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 76
>gi|452990757|emb|CCQ97993.1| hypothetical protein CULT_760016 [Clostridium ultunense Esp]
Length = 103
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG V L++A+ L+LQ ED EK I LY+NS G
Sbjct: 19 DIYSRLLKDRIIFLGTEINDHVANLVVAQLLFLQAEDPEKDISLYINSPG 68
>gi|282899048|ref|ZP_06307029.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281195964|gb|EFA70880.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 201
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG S+ LI+A+ L+L ED EK IY+Y+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYMYINSPGGS 68
>gi|229009066|ref|ZP_04166405.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock1-4]
gi|228752236|gb|EEM01925.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock1-4]
Length = 194
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 20 DIYSRLLKDRIVMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 76
>gi|32401338|gb|AAP80841.1| ATP-dependent Clp protease proteolytic subunit [Griffithsia
japonica]
Length = 114
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ + LY+ RI++LG + I+A LYL+ ED KPIYLY+NS G GS +
Sbjct: 22 DIYNRLYRERIIFLGQEIDDEIANQIIAVMLYLESEDNSKPIYLYINSPG----GSVIAG 77
Query: 76 ALVFFQISSINA 87
++ + I +
Sbjct: 78 MAIYDTMKHIKS 89
>gi|297616502|ref|YP_003701661.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophothermus lipocalidus DSM 12680]
gi|297144339|gb|ADI01096.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Syntrophothermus lipocalidus DSM 12680]
Length = 203
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV+LG V LI+A+FL+L+ ED +K I+ Y+NS G +
Sbjct: 23 DIYSRLLKDRIVFLGSPIDDQVANLIIAQFLFLEAEDPDKDIHFYINSPGGS 74
>gi|423487918|ref|ZP_17464600.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BtB2-4]
gi|423493640|ref|ZP_17470284.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
CER057]
gi|423499568|ref|ZP_17476185.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
CER074]
gi|423517516|ref|ZP_17493997.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuA2-4]
gi|423599898|ref|ZP_17575898.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD078]
gi|423662358|ref|ZP_17637527.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VDM022]
gi|401153311|gb|EJQ60738.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
CER057]
gi|401156826|gb|EJQ64228.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
CER074]
gi|401163788|gb|EJQ71133.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuA2-4]
gi|401234585|gb|EJR41063.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD078]
gi|401297977|gb|EJS03582.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VDM022]
gi|402435983|gb|EJV68016.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BtB2-4]
Length = 193
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T + D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+L
Sbjct: 3 VIPYVIEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFL 62
Query: 60 YLNSTGTTEVGSF 72
Y+NS G + F
Sbjct: 63 YINSPGGSTTAGF 75
>gi|229012047|ref|ZP_04169226.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
DSM 2048]
gi|228749135|gb|EEL98981.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
DSM 2048]
Length = 198
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T + D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+L
Sbjct: 8 VIPYVIEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFL 67
Query: 60 YLNSTGTTEVGSF 72
Y+NS G + F
Sbjct: 68 YINSPGGSTTAGF 80
>gi|197117660|ref|YP_002138087.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
bemidjiensis Bem]
gi|226706452|sp|B5EI27.1|CLPP_GEOBB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|197087020|gb|ACH38291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
bemidjiensis Bem]
Length = 199
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
T + D+ S L K+RI++LG +V L++A+ L+L+ ED +K I+LY+NS G
Sbjct: 10 TGRGERSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPG 67
>gi|70942851|ref|XP_741542.1| ATP-dependent Clp protease proteolytic subunit, [Plasmodium
chabaudi chabaudi]
gi|56519988|emb|CAH74558.1| ATP-dependent Clp protease proteolytic subunit, putative
[Plasmodium chabaudi chabaudi]
Length = 202
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 11 EQPPPDLA--SYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
E P +++ S L RI++L P + E I+++ LYL+YE KPI+LY+NSTG E
Sbjct: 10 EYPKQNISIPSLLLSKRIIFLSSPIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDLE 69
Query: 69 VGSFLCHALVFFQISSINASEYI 91
+ + IS ++ YI
Sbjct: 70 NNKIVNLNGITDVISIVDVINYI 92
>gi|30262760|ref|NP_845137.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Ames]
gi|47528081|ref|YP_019430.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
anthracis str. 'Ames Ancestor']
gi|49185606|ref|YP_028858.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
anthracis str. Sterne]
gi|49479126|ref|YP_036877.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|165868336|ref|ZP_02212996.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0488]
gi|167632654|ref|ZP_02390981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0442]
gi|167637842|ref|ZP_02396121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0193]
gi|170685514|ref|ZP_02876738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0465]
gi|170704851|ref|ZP_02895317.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0389]
gi|177649633|ref|ZP_02932635.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0174]
gi|190565733|ref|ZP_03018653.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Tsiankovskii-I]
gi|196032272|ref|ZP_03099686.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus W]
gi|196041667|ref|ZP_03108958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NVH0597-99]
gi|218903911|ref|YP_002451745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH820]
gi|227814400|ref|YP_002814409.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. CDC 684]
gi|228927840|ref|ZP_04090888.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228946399|ref|ZP_04108720.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|229122335|ref|ZP_04251549.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
95/8201]
gi|229600104|ref|YP_002867067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0248]
gi|254685352|ref|ZP_05149212.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. CNEVA-9066]
gi|254737808|ref|ZP_05195511.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Western North America USA6153]
gi|254743018|ref|ZP_05200703.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Kruger B]
gi|254752122|ref|ZP_05204159.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Vollum]
gi|254760643|ref|ZP_05212667.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Australia 94]
gi|300118751|ref|ZP_07056477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus SJ1]
gi|301054310|ref|YP_003792521.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
biovar anthracis str. CI]
gi|384180673|ref|YP_005566435.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|386736531|ref|YP_006209712.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus
anthracis str. H9401]
gi|421510220|ref|ZP_15957116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. UR-1]
gi|421636577|ref|ZP_16077176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. BF1]
gi|423575567|ref|ZP_17551686.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
MSX-D12]
gi|423605510|ref|ZP_17581403.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD102]
gi|67460478|sp|Q6HHU9.1|CLPP1_BACHK RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|67460529|sp|Q81PL4.1|CLPP1_BACAN RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|30257392|gb|AAP26623.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Ames]
gi|47503229|gb|AAT31905.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. 'Ames Ancestor']
gi|49179533|gb|AAT54909.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Sterne]
gi|49330682|gb|AAT61328.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|164715062|gb|EDR20579.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0488]
gi|167514391|gb|EDR89758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0193]
gi|167532952|gb|EDR95588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0442]
gi|170130652|gb|EDS99513.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0389]
gi|170670874|gb|EDT21613.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0465]
gi|172084707|gb|EDT69765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0174]
gi|190563760|gb|EDV17725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Tsiankovskii-I]
gi|195995023|gb|EDX58977.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus W]
gi|196027436|gb|EDX66052.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NVH0597-99]
gi|218536563|gb|ACK88961.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH820]
gi|227007231|gb|ACP16974.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. CDC 684]
gi|228661184|gb|EEL16810.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
95/8201]
gi|228813262|gb|EEM59562.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228831903|gb|EEM77492.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|229264512|gb|ACQ46149.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0248]
gi|298723908|gb|EFI64624.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus SJ1]
gi|300376479|gb|ADK05383.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus
biovar anthracis str. CI]
gi|324326757|gb|ADY22017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|384386383|gb|AFH84044.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus
anthracis str. H9401]
gi|401208892|gb|EJR15652.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
MSX-D12]
gi|401242865|gb|EJR49236.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD102]
gi|401819676|gb|EJT18850.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. UR-1]
gi|403397105|gb|EJY94342.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. BF1]
Length = 193
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|423510774|ref|ZP_17487305.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuA2-1]
gi|402453727|gb|EJV85527.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuA2-1]
Length = 193
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T + D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+L
Sbjct: 3 VIPYVIEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFL 62
Query: 60 YLNSTGTTEVGSF 72
Y+NS G + F
Sbjct: 63 YINSPGGSTTAGF 75
>gi|229133677|ref|ZP_04262503.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST196]
gi|229167385|ref|ZP_04295123.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH621]
gi|228615947|gb|EEK73034.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH621]
gi|228649712|gb|EEL05721.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST196]
Length = 198
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T + D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+L
Sbjct: 8 VIPYVIEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFL 67
Query: 60 YLNSTGTTEVGSF 72
Y+NS G + F
Sbjct: 68 YINSPGGSTTAGF 80
>gi|229185008|ref|ZP_04312198.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BGSC 6E1]
gi|376266654|ref|YP_005119366.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F837/76]
gi|228598483|gb|EEK56113.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BGSC 6E1]
gi|364512454|gb|AEW55853.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F837/76]
Length = 193
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|425737678|ref|ZP_18855949.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
massiliensis S46]
gi|425481335|gb|EKU48495.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
massiliensis S46]
Length = 195
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG +V I+++ L+LQ +D+EK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSQVDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
>gi|124026439|ref|YP_001015554.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. NATL1A]
gi|123961507|gb|ABM76290.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
Length = 224
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ L+L+++++EKPIY Y+NSTGT+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLFLEFDNSEKPIYFYINSTGTS 81
>gi|229091793|ref|ZP_04222992.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-42]
gi|228691575|gb|EEL45329.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-42]
Length = 193
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|336430079|ref|ZP_08610035.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
gi|336001250|gb|EGN31395.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
Length = 200
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG + L++A+ L+L+ ED EK I+LY+NS G
Sbjct: 19 DIYSRLLKDRIIFLGEEVNDTTASLVVAQLLFLEAEDTEKDIHLYINSPG 68
>gi|65320084|ref|ZP_00393043.1| COG0740: Protease subunit of ATP-dependent Clp proteases
[Bacillus anthracis str. A2012]
Length = 186
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|430750770|ref|YP_007213678.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
gi|430734735|gb|AGA58680.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
Length = 198
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG V L++A+ L+L ED EK IYLY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGSPIDDDVANLVIAQLLFLAAEDPEKDIYLYINSPGGS 70
>gi|423668442|ref|ZP_17643471.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VDM034]
gi|423675431|ref|ZP_17650370.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VDM062]
gi|401301646|gb|EJS07233.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VDM034]
gi|401308455|gb|EJS13850.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VDM062]
Length = 193
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T + D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+L
Sbjct: 3 VIPYVIEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFL 62
Query: 60 YLNSTGTTEVGSF 72
Y+NS G + F
Sbjct: 63 YINSPGGSTTAGF 75
>gi|83589392|ref|YP_429401.1| ATP-dependent Clp protease proteolytic subunit [Moorella
thermoacetica ATCC 39073]
gi|115311785|sp|Q2RL31.1|CLPP_MOOTA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|83572306|gb|ABC18858.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorella
thermoacetica ATCC 39073]
Length = 199
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG + V L++A+ L+L+ ED +K I+LY+NS G +
Sbjct: 20 DIYSRLLKDRIIFLGSAIDDHVANLVIAQMLFLEAEDPDKDIHLYINSPGGS 71
>gi|423077037|ref|ZP_17065745.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Desulfitobacterium hafniense DP7]
gi|361851989|gb|EHL04277.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Desulfitobacterium hafniense DP7]
Length = 196
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG V L++A+ L+L+ ED EK I+LY+NS G +
Sbjct: 14 DIYSRLLKDRIIFLGGPVTDDVANLVVAQMLFLEAEDPEKDIFLYINSPGGS 65
>gi|163940539|ref|YP_001645423.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
weihenstephanensis KBAB4]
gi|423365465|ref|ZP_17342898.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD142]
gi|163862736|gb|ABY43795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
weihenstephanensis KBAB4]
gi|401090832|gb|EJP98984.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD142]
Length = 193
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T + D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+L
Sbjct: 3 VIPYVIEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFL 62
Query: 60 YLNSTGTTEVGSF 72
Y+NS G + F
Sbjct: 63 YINSPGGSTTAGF 75
>gi|336118811|ref|YP_004573583.1| ATP-dependent Clp protease ATP-binding subunit ClpP [Microlunatus
phosphovorus NM-1]
gi|334686595|dbj|BAK36180.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microlunatus
phosphovorus NM-1]
Length = 199
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L +RIVYLG V +I+A+ L+L+ EDAE+ I LY+NS G
Sbjct: 21 DIYSRLLSDRIVYLGTELDDGVANVIVAQLLHLESEDAEREINLYINSPG 70
>gi|325294216|ref|YP_004280730.1| ATP-dependent Clp protease proteolytic subunit
[Desulfurobacterium thermolithotrophum DSM 11699]
gi|325064664|gb|ADY72671.1| ATP-dependent Clp protease proteolytic subunit
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 200
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+ LG V LI+A+ L+L+ ED EK IYLY+NS G
Sbjct: 24 DIYSRLLKDRIIMLGTPIDDHVANLIVAQLLFLEAEDPEKDIYLYINSPG 73
>gi|397691263|ref|YP_006528517.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Melioribacter roseus P3M]
gi|395812755|gb|AFN75504.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Melioribacter roseus P3M]
Length = 222
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
T + D+ S L + RIV+LG + + LI+A+ L+L+ ED +K IYLY+NS G +
Sbjct: 29 TGRGERGMDIFSRLLRERIVFLGTAIDDHIASLIIAQLLFLEAEDPDKDIYLYINSPGGS 88
>gi|354559730|ref|ZP_08978975.1| ATP-dependent Clp protease proteolytic subunit
[Desulfitobacterium metallireducens DSM 15288]
gi|353540550|gb|EHC10024.1| ATP-dependent Clp protease proteolytic subunit
[Desulfitobacterium metallireducens DSM 15288]
Length = 204
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG V LI+A+ L+L+ ED EK I+LY+NS G +
Sbjct: 20 DIYSRLLKDRIIFLGGPIDDDVANLIVAQLLFLEAEDPEKDIFLYINSPGGS 71
>gi|228934064|ref|ZP_04096905.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228825578|gb|EEM71370.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 198
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 24 DIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 80
>gi|229196961|ref|ZP_04323701.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1293]
gi|228586518|gb|EEK44596.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1293]
Length = 198
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 24 DIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 80
>gi|89896100|ref|YP_519587.1| hypothetical protein DSY3354 [Desulfitobacterium hafniense Y51]
gi|219670517|ref|YP_002460952.1| ATP-dependent Clp protease proteolytic subunit
[Desulfitobacterium hafniense DCB-2]
gi|116243113|sp|Q24S49.1|CLPP2_DESHY RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|89335548|dbj|BAE85143.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219540777|gb|ACL22516.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfitobacterium hafniense DCB-2]
Length = 202
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG V L++A+ L+L+ ED EK I+LY+NS G +
Sbjct: 20 DIYSRLLKDRIIFLGGPVTDDVANLVVAQMLFLEAEDPEKDIFLYINSPGGS 71
>gi|452822409|gb|EME29429.1| ATP-dependent Clp protease, protease subunit [Galdieria
sulphuraria]
Length = 262
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ + LY+ RI++LG + I+A LYL ED KPIYLY+NS G GS +
Sbjct: 86 DIYNRLYRERIIFLGQEIDDEISNQIIAVMLYLDSEDNTKPIYLYINSPG----GSVIAG 141
Query: 76 ALVFFQISSINASEYI 91
++ + I ASE +
Sbjct: 142 LAIYDTMKHI-ASEVV 156
>gi|228915390|ref|ZP_04078983.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228844333|gb|EEM89391.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 198
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 24 DIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 80
>gi|428222327|ref|YP_007106497.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. PCC 7502]
gi|427995667|gb|AFY74362.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. PCC 7502]
Length = 198
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG + +V L++A+ L+L+ ED EK I++Y+NS G +
Sbjct: 17 DIFSRLLRERIVFLGTAIDDNVSNLVVAQLLFLEAEDPEKDIFIYINSPGGS 68
>gi|427724133|ref|YP_007071410.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
gi|427355853|gb|AFY38576.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
Length = 199
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG + LI+A+ L+L+ +D EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQQVNDEIANLIVAQLLFLEADDPEKDIYLYINSPGGS 68
>gi|253701609|ref|YP_003022798.1| ATP-dependent Clp protease proteolytic subunit [Geobacter sp.
M21]
gi|259585955|sp|C6E2T0.1|CLPP_GEOSM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|251776459|gb|ACT19040.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
sp. M21]
Length = 199
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
T + D+ S L K+RI++LG +V L++A+ L+L+ ED +K I+LY+NS G
Sbjct: 10 TGRGERSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPG 67
>gi|428306359|ref|YP_007143184.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
gi|428247894|gb|AFZ13674.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
Length = 202
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + LI+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIIFLGQQVDADLANLIVAQLLFLEAEDPEKDIYLYINSPGGS 68
>gi|374605361|ref|ZP_09678292.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Paenibacillus dendritiformis C454]
gi|374389036|gb|EHQ60427.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Paenibacillus dendritiformis C454]
Length = 198
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG + V I+A+ L+LQ +D EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGSAIDDDVANSIIAQMLFLQADDPEKDIHLYINSPGGS 70
>gi|254722760|ref|ZP_05184548.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A1055]
Length = 193
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSSLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|17228733|ref|NP_485281.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|21759071|sp|Q8YXH5.1|CLPP1_ANASP RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|17130585|dbj|BAB73195.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
Length = 204
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG ++ LI+A+ L+L ED EK IYLY+NS G +
Sbjct: 18 DIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGS 69
>gi|440682480|ref|YP_007157275.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
gi|428679599|gb|AFZ58365.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
Length = 201
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG S+ LI+A+ L+L ED EK IY+Y+NS G +
Sbjct: 17 DIYSRLLRERIIFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYMYINSPGGS 68
>gi|423396717|ref|ZP_17373918.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG2X1-1]
gi|423407568|ref|ZP_17384717.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG2X1-3]
gi|401651293|gb|EJS68858.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG2X1-1]
gi|401658894|gb|EJS76383.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG2X1-3]
Length = 193
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|428202443|ref|YP_007081032.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
gi|427979875|gb|AFY77475.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
Length = 204
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG L++A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQQVTDESANLVVAQLLFLEAEDPEKDIYLYINSPGGS 68
>gi|323703643|ref|ZP_08115286.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum nigrificans DSM 574]
gi|333922902|ref|YP_004496482.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323531415|gb|EGB21311.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum nigrificans DSM 574]
gi|333748463|gb|AEF93570.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 195
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+++G + L++A+FL+L+ ED EK I+LY+NS G
Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIHLYINSPG 69
>gi|119491296|ref|ZP_01623350.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
gi|119453460|gb|EAW34622.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
Length = 203
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L ++RI++LG + LI+A+ L+L +D EK IYLY+NS G +
Sbjct: 17 DIYSRLLRDRIIFLGQQVTADLANLIVAQMLFLDADDPEKDIYLYINSPGGS 68
>gi|376295039|ref|YP_005166269.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfovibrio desulfuricans ND132]
gi|323457600|gb|EGB13465.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfovibrio desulfuricans ND132]
Length = 202
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+ LG + V LI A+ L+L+ ED EK IY+Y+NS G
Sbjct: 19 DIYSRLLKDRIILLGTAIDDHVASLICAQLLFLESEDPEKEIYMYINSPG 68
>gi|423469062|ref|ZP_17445806.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG6O-2]
gi|402440413|gb|EJV72406.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG6O-2]
Length = 193
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|423551473|ref|ZP_17527800.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
ISP3191]
gi|401187311|gb|EJQ94384.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
ISP3191]
Length = 193
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIVIIGSEINNQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|282891306|ref|ZP_06299808.1| hypothetical protein pah_c050o084 [Parachlamydia acanthamoebae
str. Hall's coccus]
gi|338175057|ref|YP_004651867.1| ATP-dependent Clp protease proteolytic subunit 2 [Parachlamydia
acanthamoebae UV-7]
gi|281498803|gb|EFB41120.1| hypothetical protein pah_c050o084 [Parachlamydia acanthamoebae
str. Hall's coccus]
gi|336479415|emb|CCB86013.1| ATP-dependent Clp protease proteolytic subunit 2 [Parachlamydia
acanthamoebae UV-7]
Length = 202
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
TA + D+ S L ++RIV++G V +++A+ L+L+ ED +K ++LY+NS G
Sbjct: 18 TARGERSMDIFSRLLQDRIVFIGTDITDQVANIVVAQLLFLKMEDPKKDVHLYINSMG 75
>gi|423390965|ref|ZP_17368191.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG1X1-3]
gi|401636798|gb|EJS54551.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG1X1-3]
Length = 193
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|334339586|ref|YP_004544566.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfotomaculum ruminis DSM 2154]
gi|334090940|gb|AEG59280.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum ruminis DSM 2154]
Length = 195
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+++G + L++A+FL+L+ ED EK I+LY+NS G
Sbjct: 20 DIYSRLLKDRIIFIGGPIEDHIANLVIAQFLFLEAEDPEKDIHLYINSPG 69
>gi|134300401|ref|YP_001113897.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
reducens MI-1]
gi|172044337|sp|A4J7L9.1|CLPP_DESRM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134053101|gb|ABO51072.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfotomaculum reducens MI-1]
Length = 195
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+++G + L++A+FL+L+ ED EK I+LY+NS G
Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIHLYINSPG 69
>gi|423559568|ref|ZP_17535870.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
MC67]
gi|401188072|gb|EJQ95141.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
MC67]
Length = 193
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|229018102|ref|ZP_04174977.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1273]
gi|229024283|ref|ZP_04180742.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1272]
gi|228737058|gb|EEL87594.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1272]
gi|228743193|gb|EEL93318.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1273]
Length = 198
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 24 DIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 80
>gi|189424987|ref|YP_001952164.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacter
lovleyi SZ]
gi|226706453|sp|B3E1Z4.1|CLPP_GEOLS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189421246|gb|ACD95644.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
lovleyi SZ]
Length = 197
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RIV+LG V +L++A+ L+L+ ED +K I+LY+NS G
Sbjct: 18 DIYSRLLKERIVFLGGEINDQVADLVIAQLLFLEAEDPDKDIHLYINSPG 67
>gi|423523346|ref|ZP_17499819.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuA4-10]
gi|401171588|gb|EJQ78814.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuA4-10]
Length = 193
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|229060463|ref|ZP_04197826.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH603]
gi|228718846|gb|EEL70467.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH603]
Length = 198
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 24 DIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 80
>gi|170078453|ref|YP_001735091.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. PCC 7002]
gi|169886122|gb|ACA99835.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. PCC 7002]
Length = 198
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG + LI+A+ L+L+ +D EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGTQVNDEIANLIVAQLLFLEADDPEKDIYLYINSPGGS 68
>gi|229161662|ref|ZP_04289642.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
gi|228621907|gb|EEK78753.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
Length = 193
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|225848210|ref|YP_002728373.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225644423|gb|ACN99473.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 202
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG V LI+A+ L+L+ ED EK IY+Y+NS G F
Sbjct: 24 DIYSRLLKDRIILLGTPIDDHVANLIVAQLLFLEAEDPEKDIYMYINSPGGVVTAGF 80
>gi|423611176|ref|ZP_17587037.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD107]
gi|401248629|gb|EJR54951.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD107]
Length = 193
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|229079979|ref|ZP_04212510.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock4-2]
gi|229179074|ref|ZP_04306431.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
172560W]
gi|423413446|ref|ZP_17390566.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG3O-2]
gi|423430769|ref|ZP_17407773.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG4O-1]
gi|423436292|ref|ZP_17413273.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG4X12-1]
gi|228604442|gb|EEK61906.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
172560W]
gi|228703358|gb|EEL55813.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock4-2]
gi|401101544|gb|EJQ09533.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG3O-2]
gi|401118846|gb|EJQ26674.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG4O-1]
gi|401122906|gb|EJQ30690.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG4X12-1]
Length = 193
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|206602656|gb|EDZ39137.1| Peptidase S14, ClpP [Leptospirillum sp. Group II '5-way CG']
Length = 203
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG + V L++A+ L+L+ EDA K I LY+NS G
Sbjct: 18 DIYSRLLKDRIIFLGTAIDDMVANLVIAQLLFLEAEDASKDINLYINSPG 67
>gi|410479152|ref|YP_006766789.1| peptidase S14, ClpP [Leptospirillum ferriphilum ML-04]
gi|424867689|ref|ZP_18291469.1| Peptidase S14, ClpP [Leptospirillum sp. Group II 'C75']
gi|124514481|gb|EAY55994.1| ATP-dependent Clp protease, proteolytic subunit [Leptospirillum
rubarum]
gi|387221743|gb|EIJ76256.1| Peptidase S14, ClpP [Leptospirillum sp. Group II 'C75']
gi|406774404|gb|AFS53829.1| peptidase S14, ClpP [Leptospirillum ferriphilum ML-04]
Length = 203
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG + V L++A+ L+L+ EDA K I LY+NS G
Sbjct: 18 DIYSRLLKDRIIFLGTAIDDMVANLVIAQLLFLEAEDASKDINLYINSPG 67
>gi|428211847|ref|YP_007084991.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
gi|428000228|gb|AFY81071.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
Length = 234
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
DL S L + RIV+LG +V +LI+A+ L+L ED EK I LY+NS G +
Sbjct: 47 DLYSRLLRERIVFLGTPVDDNVADLIVAQMLFLDAEDPEKDIQLYINSPGGS 98
>gi|423627861|ref|ZP_17603610.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD154]
gi|401271158|gb|EJR77176.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD154]
Length = 193
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|312880128|ref|ZP_07739928.1| ATP-dependent Clp protease proteolytic subunit ClpP [Aminomonas
paucivorans DSM 12260]
gi|310783419|gb|EFQ23817.1| ATP-dependent Clp protease proteolytic subunit ClpP [Aminomonas
paucivorans DSM 12260]
Length = 201
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RIV+LG + L++A+ L+L+ ED EK +YLY+NS G
Sbjct: 27 DIYSRLLKDRIVFLGEEIEEHMANLVVAQLLFLESEDPEKDVYLYINSPG 76
>gi|229030470|ref|ZP_04186509.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1271]
gi|228730841|gb|EEL81782.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1271]
Length = 198
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 80
>gi|196230686|ref|ZP_03129547.1| Endopeptidase Clp [Chthoniobacter flavus Ellin428]
gi|196225027|gb|EDY19536.1| Endopeptidase Clp [Chthoniobacter flavus Ellin428]
Length = 228
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L K+RI++LG + V I+A+ L+LQ ED +K I +Y+NS G + +
Sbjct: 33 DIYSRLLKDRIIFLGTAIDDGVANSIIAQLLFLQMEDGKKDINIYINSPGGSVTAGLAIY 92
Query: 76 ALVFFQISSIN 86
+ F +N
Sbjct: 93 DTMQFLTCDVN 103
>gi|206971861|ref|ZP_03232810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH1134]
gi|365161174|ref|ZP_09357323.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus sp.
7_6_55CFAA_CT2]
gi|423424913|ref|ZP_17401944.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG3X2-2]
gi|423506500|ref|ZP_17483090.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HD73]
gi|423581066|ref|ZP_17557177.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD014]
gi|423636486|ref|ZP_17612139.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD156]
gi|449089852|ref|YP_007422293.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. HD73]
gi|206733246|gb|EDZ50419.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH1134]
gi|363621401|gb|EHL72612.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus sp.
7_6_55CFAA_CT2]
gi|401113685|gb|EJQ21554.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG3X2-2]
gi|401215831|gb|EJR22546.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD014]
gi|401274837|gb|EJR80806.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD156]
gi|402447941|gb|EJV79790.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HD73]
gi|449023609|gb|AGE78772.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. HD73]
Length = 193
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|47569052|ref|ZP_00239742.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9241]
gi|52142722|ref|YP_084107.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus
E33L]
gi|217960230|ref|YP_002338790.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH187]
gi|228985882|ref|ZP_04146030.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|375284743|ref|YP_005105182.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NC7401]
gi|423352537|ref|ZP_17330164.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
IS075]
gi|423372675|ref|ZP_17350015.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
AND1407]
gi|423568352|ref|ZP_17544599.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
MSX-A12]
gi|67460465|sp|Q63AG0.1|CLPP1_BACCZ RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|47554321|gb|EAL12682.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9241]
gi|51976191|gb|AAU17741.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus
E33L]
gi|217063351|gb|ACJ77601.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH187]
gi|228773811|gb|EEM22229.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|358353270|dbj|BAL18442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NC7401]
gi|401091636|gb|EJP99776.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
IS075]
gi|401099112|gb|EJQ07122.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
AND1407]
gi|401210640|gb|EJR17391.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
MSX-A12]
Length = 193
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|384186850|ref|YP_005572746.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar chinensis CT-43]
gi|410675156|ref|YP_006927527.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus
thuringiensis Bt407]
gi|423384335|ref|ZP_17361591.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG1X1-2]
gi|423529293|ref|ZP_17505738.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuB1-1]
gi|452199211|ref|YP_007479292.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|17981474|gb|AAL51031.1|AF454758_1 ClpP2 [Bacillus thuringiensis]
gi|326940559|gb|AEA16455.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar chinensis CT-43]
gi|401640236|gb|EJS57968.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG1X1-2]
gi|402448722|gb|EJV80561.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuB1-1]
gi|409174285|gb|AFV18590.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus
thuringiensis Bt407]
gi|452104604|gb|AGG01544.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 193
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|124809228|ref|XP_001348522.1| ATP-dependent Clp protease proteolytic subunit, putative
[Plasmodium falciparum 3D7]
gi|23497417|gb|AAN36961.1|AE014821_48 ATP-dependent Clp protease proteolytic subunit, putative
[Plasmodium falciparum 3D7]
Length = 244
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFL 73
++ S L RI++L P + E I+++ LYL+YE KPI+LY+NSTG + +
Sbjct: 59 NIPSLLLSKRIIFLSSPIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKII 116
>gi|229151000|ref|ZP_04279211.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1550]
gi|228632560|gb|EEK89178.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1550]
Length = 198
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 80
>gi|427931024|pdb|4HNK|A Chain A, Crystal Structure Of An Enzyme
gi|427931025|pdb|4HNK|B Chain B, Crystal Structure Of An Enzyme
gi|427931026|pdb|4HNK|C Chain C, Crystal Structure Of An Enzyme
gi|427931027|pdb|4HNK|D Chain D, Crystal Structure Of An Enzyme
gi|427931028|pdb|4HNK|E Chain E, Crystal Structure Of An Enzyme
gi|427931029|pdb|4HNK|F Chain F, Crystal Structure Of An Enzyme
gi|427931030|pdb|4HNK|G Chain G, Crystal Structure Of An Enzyme
gi|427931031|pdb|4HNK|H Chain H, Crystal Structure Of An Enzyme
gi|427931032|pdb|4HNK|I Chain I, Crystal Structure Of An Enzyme
gi|427931033|pdb|4HNK|J Chain J, Crystal Structure Of An Enzyme
gi|427931034|pdb|4HNK|K Chain K, Crystal Structure Of An Enzyme
gi|427931035|pdb|4HNK|L Chain L, Crystal Structure Of An Enzyme
gi|427931036|pdb|4HNK|M Chain M, Crystal Structure Of An Enzyme
gi|427931037|pdb|4HNK|N Chain N, Crystal Structure Of An Enzyme
Length = 219
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
++ S L RI++L P + E I+++ LYL+YE KPI+LY+NSTG + +
Sbjct: 34 NIPSLLLSKRIIFLSSPIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKIINL 93
Query: 76 ALVFFQISSINASEYI 91
+ IS ++ YI
Sbjct: 94 NGITDVISIVDVINYI 109
>gi|423642205|ref|ZP_17617823.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD166]
gi|401277148|gb|EJR83092.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD166]
Length = 193
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|399949673|gb|AFP65331.1| ATP-dependent, proteolytic subunit [Chroomonas mesostigmatica
CCMP1168]
Length = 234
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ + LY+ RI++LG + I+A LYL ED KPIYLY+NS G +
Sbjct: 60 DIYNRLYRERIIFLGQEIDDEIANQIIAVMLYLDSEDNSKPIYLYINSPGGS 111
>gi|222100864|ref|YP_002535432.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
neapolitana DSM 4359]
gi|221573254|gb|ACM24066.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
neapolitana DSM 4359]
Length = 200
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV+LG V L++A+ L+L+ ED +K +YLY+NS G +
Sbjct: 26 DIFSRLLKDRIVFLGSPIDDHVANLVIAQLLFLEAEDPDKDVYLYINSPGGS 77
>gi|374583503|ref|ZP_09656597.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus youngiae DSM 17734]
gi|374419585|gb|EHQ92020.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus youngiae DSM 17734]
Length = 205
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG + V LI+A+ L+L+ ED EK I LY+NS G +
Sbjct: 20 DIYSRLLKDRIIFLGGAIDADVANLIVAQMLFLEAEDPEKDINLYINSPGGS 71
>gi|228953123|ref|ZP_04115182.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|229190887|ref|ZP_04317878.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10876]
gi|228592555|gb|EEK50383.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10876]
gi|228806538|gb|EEM53098.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 198
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 80
>gi|167628597|ref|YP_001679096.1| ATP-dependent Clp protease proteolytic subunit [Heliobacterium
modesticaldum Ice1]
gi|167591337|gb|ABZ83085.1| ATP-dependent clp protease proteolytic subunit [Heliobacterium
modesticaldum Ice1]
Length = 199
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG + +V LI+A+ L+L+ ED +K I+LY+NS G F
Sbjct: 20 DIYSRLLKDRIIILGSAIDDNVANLIIAQLLFLEAEDPDKDIHLYINSPGGAITSGF 76
>gi|443315652|ref|ZP_21045132.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Leptolyngbya sp. PCC 6406]
gi|442784746|gb|ELR94606.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Leptolyngbya sp. PCC 6406]
Length = 201
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG LI+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIIFLGQEVTSDSANLIVAQMLFLEAEDPEKDIYLYVNSPGGS 68
>gi|228959022|ref|ZP_04120723.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228800683|gb|EEM47599.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pakistani str. T13001]
Length = 198
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 80
>gi|229139426|ref|ZP_04267997.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST26]
gi|228643973|gb|EEL00234.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST26]
Length = 164
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|427418142|ref|ZP_18908325.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
gi|425760855|gb|EKV01708.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
Length = 201
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG LI+A+ L+L+ ED E+ IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQQVTAESSNLIVAQMLFLEAEDPERDIYLYINSPGGS 68
>gi|443479146|ref|ZP_21068788.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Pseudanabaena biceps PCC 7429]
gi|443015411|gb|ELS30378.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Pseudanabaena biceps PCC 7429]
Length = 198
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG S+ +I+A+ L+L+ +D EK I+LY+NS G +
Sbjct: 17 DIFSRLLRERIVFLGQQVDDSISNIIVAQLLFLEADDPEKDIFLYINSPGGS 68
>gi|51891496|ref|YP_074187.1| ATP-dependent Clp protease proteolytic subunit [Symbiobacterium
thermophilum IAM 14863]
gi|67460470|sp|Q67SK0.1|CLPP1_SYMTH RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|51855185|dbj|BAD39343.1| ATP-dependent Clp protease proteolytic subunit [Symbiobacterium
thermophilum IAM 14863]
Length = 202
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV+LG V +++A+ L+L+ ED +KP+ LY+NS G +
Sbjct: 20 DIYSRLLKDRIVFLGTPIDDQVANVVIAQLLFLESEDPDKPVNLYINSPGGS 71
>gi|206973614|ref|ZP_03234532.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus H3081.97]
gi|206747770|gb|EDZ59159.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus H3081.97]
Length = 193
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|403252433|ref|ZP_10918743.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp.
EMP]
gi|402812446|gb|EJX26925.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp.
EMP]
Length = 201
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV+LG V L++A+ L+L+ ED +K +YLY+NS G +
Sbjct: 26 DIFSRLLKDRIVFLGSPIDDHVANLVIAQLLFLEAEDPDKDVYLYINSPGGS 77
>gi|228939909|ref|ZP_04102486.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228972800|ref|ZP_04133399.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228979383|ref|ZP_04139719.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis Bt407]
gi|228780387|gb|EEM28618.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis Bt407]
gi|228787015|gb|EEM34995.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228819840|gb|EEM65888.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar berliner ATCC 10792]
Length = 198
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 80
>gi|402557004|ref|YP_006598275.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus FRI-35]
gi|401798214|gb|AFQ12073.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus FRI-35]
Length = 193
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|222096291|ref|YP_002530348.1| ATP-dependent clp protease, proteolytic subunit clpp [Bacillus
cereus Q1]
gi|221240349|gb|ACM13059.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus Q1]
Length = 193
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|427728056|ref|YP_007074293.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
gi|427363975|gb|AFY46696.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
Length = 203
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG ++ LI+A+ L+L ED EK IYLY+NS G +
Sbjct: 18 DIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGS 69
>gi|317486004|ref|ZP_07944859.1| Clp protease [Bilophila wadsworthia 3_1_6]
gi|345887722|ref|ZP_08838886.1| ATP-dependent Clp protease proteolytic subunit [Bilophila sp.
4_1_30]
gi|316922777|gb|EFV44008.1| Clp protease [Bilophila wadsworthia 3_1_6]
gi|345041509|gb|EGW45656.1| ATP-dependent Clp protease proteolytic subunit [Bilophila sp.
4_1_30]
Length = 207
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV LG +V LI A+ L+L+ +D EK IYLY+NS G +
Sbjct: 24 DIFSRLLKDRIVLLGSEVNDAVASLICAQLLFLESQDPEKEIYLYINSPGGS 75
>gi|229070268|ref|ZP_04203518.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F65185]
gi|228712832|gb|EEL64757.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F65185]
Length = 198
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 75
>gi|160331468|ref|XP_001712441.1| clpP2 [Hemiselmis andersenii]
gi|159765889|gb|ABW98116.1| clpP2 [Hemiselmis andersenii]
Length = 233
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ + LY+ RI++LG + I+A LYL ED KPIYLY+NS G +
Sbjct: 57 DIYNRLYRERIIFLGQEIDDEIANQIIAVMLYLDSEDNSKPIYLYINSPGGS 108
>gi|229173439|ref|ZP_04300983.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
MM3]
gi|228610133|gb|EEK67411.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
MM3]
Length = 198
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 80
>gi|330040589|ref|XP_003239964.1| ATP-dependent, proteolytic subunit [Cryptomonas paramecium]
gi|327206890|gb|AEA39066.1| ATP-dependent, proteolytic subunit [Cryptomonas paramecium]
Length = 232
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 2 IPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYL 61
IP +S W D+ + LY+ RI++LG + I+A LYL E KPIYLY+
Sbjct: 49 IPGSSSADW----IDIYNRLYRERIIFLGQEIDDEIANQIIAVMLYLDSESNSKPIYLYI 104
Query: 62 NSTGTT 67
NS G +
Sbjct: 105 NSPGGS 110
>gi|228921458|ref|ZP_04084781.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228838231|gb|EEM83549.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 198
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 80
>gi|452851006|ref|YP_007492690.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
piezophilus]
gi|451894660|emb|CCH47539.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
piezophilus]
Length = 203
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + V LI A+ L+L+ ED EK IY+Y+NS G +
Sbjct: 19 DIYSRLLKDRIILLGSAIDDHVASLICAQLLFLESEDPEKEIYMYINSPGGS 70
>gi|428217239|ref|YP_007101704.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Pseudanabaena sp. PCC 7367]
gi|427989021|gb|AFY69276.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Pseudanabaena sp. PCC 7367]
Length = 232
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG ++ LI+++ L+L+ ED EK IYLY+NS G +
Sbjct: 48 DIYSRLLRERIVFLGTQVDDNLASLIMSQLLFLEAEDPEKDIYLYINSPGGS 99
>gi|402815454|ref|ZP_10865046.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Paenibacillus alvei DSM 29]
gi|402506494|gb|EJW17017.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Paenibacillus alvei DSM 29]
Length = 198
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG + V ++A+ L+LQ +D EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGSAIDDDVANSVIAQLLFLQADDPEKDIFLYINSPGGS 70
>gi|229046487|ref|ZP_04192142.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH676]
gi|228724849|gb|EEL76151.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH676]
Length = 198
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 80
>gi|219124070|ref|XP_002182335.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406296|gb|EEC46236.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 214
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 2 IPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYL 61
+P + W D+ + LY+ RI++LG + ++ LYL ED+ KPIYLY+
Sbjct: 23 VPGSQSADW----VDIYNRLYRERIIFLGAEIDDELANQVIGVMLYLDSEDSSKPIYLYI 78
Query: 62 NSTGTTEVGSFLCHALVFFQISSINA 87
NS G GS + +F + I +
Sbjct: 79 NSPG----GSVISGLAIFDAMQHIKS 100
>gi|148240099|ref|YP_001225486.1| ATP-dependent Clp protease-like protein [Synechococcus sp. WH
7803]
gi|147848638|emb|CAK24189.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
Length = 223
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ LYL++++ +KPIY Y+NSTGT+
Sbjct: 27 KERIVYLGLPLFSDDDTKRQVGIDVTELIIAQLLYLEFDNPDKPIYFYINSTGTS 81
>gi|406995849|gb|EKE14433.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 197
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG + LI+A+ L+L+ ED EK I +Y+NS G
Sbjct: 25 DIYSRLLKDRIIFLGTEIDDDLANLIMAQILFLEAEDKEKDIQMYINSPG 74
>gi|229156366|ref|ZP_04284461.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 4342]
gi|228627089|gb|EEK83821.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 4342]
Length = 198
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGF 80
>gi|254431834|ref|ZP_05045537.1| Clp protease [Cyanobium sp. PCC 7001]
gi|197626287|gb|EDY38846.1| Clp protease [Cyanobium sp. PCC 7001]
Length = 232
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ LYL++++ EKPI+ Y+NSTGT+
Sbjct: 27 KERIVYLGLPLFSDDEAKRQMGIDVTELIIAQLLYLEFDNPEKPIFFYINSTGTS 81
>gi|318040431|ref|ZP_07972387.1| ATP-dependent Clp protease-like protein [Synechococcus sp.
CB0101]
Length = 233
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ LYL++++ EKPI+ Y+NSTGT+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLYLEFDNPEKPIFFYINSTGTS 81
>gi|317970580|ref|ZP_07971970.1| ATP-dependent Clp protease-like protein [Synechococcus sp.
CB0205]
Length = 225
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ LYL++++ EKPI+ Y+NSTGT+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLYLEFDNPEKPIFFYINSTGTS 81
>gi|206890175|ref|YP_002248104.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|226706554|sp|B5YI38.1|CLPP_THEYD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|206742113|gb|ACI21170.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 195
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+++G V +++A+ L+LQ ED EK I++Y+NS G
Sbjct: 19 DIYSRLLKDRIIFIGTEINDHVANVVIAQLLFLQTEDPEKDIHIYINSPG 68
>gi|75906770|ref|YP_321066.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
gi|110816454|sp|Q3MFR5.1|CLPP1_ANAVT RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|75700495|gb|ABA20171.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
Length = 204
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG ++ LI+A+ L+L ED EK IYLY+NS G +
Sbjct: 18 DIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGS 69
>gi|421862173|ref|ZP_16293988.1| Clp protease [Paenibacillus popilliae ATCC 14706]
gi|410828304|dbj|GAC44425.1| Clp protease [Paenibacillus popilliae ATCC 14706]
Length = 198
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG + V ++A+ L+LQ +D EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGSAIDDDVANSVIAQMLFLQADDPEKDIHLYINSPGGS 70
>gi|374339257|ref|YP_005095993.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinitoga
piezophila KA3]
gi|372100791|gb|AEX84695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinitoga
piezophila KA3]
Length = 198
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG V LI+A+ L+L+ +D EK IYLY+NS G +
Sbjct: 20 DIYSRLLKDRIIFLGSEVNDYVSNLIVAQMLFLEAQDPEKDIYLYINSPGGS 71
>gi|33240836|ref|NP_875778.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
gi|33238365|gb|AAQ00431.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 221
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ L+L++++ EKPIY Y+NSTGT+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLFLEFDNPEKPIYFYINSTGTS 81
>gi|163785571|ref|ZP_02180137.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga
sp. 128-5-R1-1]
gi|159879161|gb|EDP73099.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga
sp. 128-5-R1-1]
Length = 97
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RIV LG + LI+A+ L+L+ ED EK IYLY+NS G
Sbjct: 30 DIYSRLLKDRIVLLGFPIDDHIANLIVAQLLFLESEDPEKDIYLYINSPG 79
>gi|427412668|ref|ZP_18902860.1| ATP-dependent Clp protease proteolytic subunit [Veillonella ratti
ACS-216-V-Col6b]
gi|425716475|gb|EKU79459.1| ATP-dependent Clp protease proteolytic subunit [Veillonella ratti
ACS-216-V-Col6b]
Length = 197
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RIV+LG V L++A+ L+L+ ED +K I+LY+NS G
Sbjct: 18 DIYSRLLKDRIVFLGGPINDDVANLVIAQLLFLEAEDPDKDIHLYINSPG 67
>gi|162606094|ref|XP_001713562.1| ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
gi|13794482|gb|AAK39857.1|AF165818_65 ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
Length = 233
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 2 IPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYL 61
+P + W D+ + LY+ RI++LG + I+A LYL ED KPIY+Y+
Sbjct: 44 VPGSPSADW----VDIYNRLYRERIIFLGQEIDDEIANQIIAVMLYLDSEDNSKPIYMYI 99
Query: 62 NSTGTT 67
NS G +
Sbjct: 100 NSPGGS 105
>gi|33866182|ref|NP_897741.1| ATP-dependent Clp protease-like protein [Synechococcus sp. WH
8102]
gi|33639157|emb|CAE08163.1| ATP-dependent Clp protease proteolytic subunit 4 [Synechococcus
sp. WH 8102]
Length = 222
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ L+L++++ EKPIY Y+NSTGT+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLFLEFDNPEKPIYFYINSTGTS 81
>gi|295112117|emb|CBL28867.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Synergistetes bacterium SGP1]
Length = 195
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV+LG + V I+A+ L+L+ ED +K I+LY+NS G +
Sbjct: 21 DIYSRLLKDRIVFLGTQVMDDVANSIVAQLLFLESEDPDKDIHLYINSPGGS 72
>gi|406909848|gb|EKD50014.1| hypothetical protein ACD_62C00680G0002 [uncultured bacterium]
Length = 219
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG + V L++A+ L+L+ ED EK I LY+NS G
Sbjct: 25 DIYSRLLKDRIIFLGTAIDDVVANLVIAQILFLESEDHEKDIQLYINSPG 74
>gi|443323686|ref|ZP_21052690.1| protease subunit of ATP-dependent protease [Gloeocapsa sp. PCC
73106]
gi|442786668|gb|ELR96397.1| protease subunit of ATP-dependent protease [Gloeocapsa sp. PCC
73106]
Length = 200
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
DL + LY+ RI++LG S+ I++ LYL ED KPIYLY+NS G +
Sbjct: 22 DLYNRLYRERIIFLGRGVNDSLANQIISVMLYLDSEDPGKPIYLYINSPGGS 73
>gi|427930948|pdb|4GM2|A Chain A, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
gi|427930949|pdb|4GM2|B Chain B, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
gi|427930950|pdb|4GM2|C Chain C, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
gi|427930951|pdb|4GM2|D Chain D, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
gi|427930952|pdb|4GM2|E Chain E, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
gi|427930953|pdb|4GM2|F Chain F, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
gi|427930954|pdb|4GM2|G Chain G, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
Length = 205
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 19 SYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCHALV 78
S L RI++L P + E I+++ LYL+YE KPI+LY+NSTG + + +
Sbjct: 23 SLLLSKRIIFLSSPIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKIINLNGI 82
Query: 79 FFQISSINASEYI 91
IS ++ YI
Sbjct: 83 TDVISIVDVINYI 95
>gi|313673004|ref|YP_004051115.1| ATP-dependent clp protease proteolytic subunit clpp
[Calditerrivibrio nitroreducens DSM 19672]
gi|312939760|gb|ADR18952.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Calditerrivibrio nitroreducens DSM 19672]
Length = 195
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG + +V I+A+ L+L+ ED +K IYLY+NS G
Sbjct: 20 DIYSRLLKDRIIFLGTAIDDTVANSIVAQMLFLEAEDPKKDIYLYINSPG 69
>gi|399050842|ref|ZP_10740886.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Brevibacillus sp. CF112]
gi|433542108|ref|ZP_20498542.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
agri BAB-2500]
gi|398051558|gb|EJL43880.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Brevibacillus sp. CF112]
gi|432186623|gb|ELK44090.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
agri BAB-2500]
Length = 193
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG V L++A+ L+LQ ED EK I LY+NS G +
Sbjct: 18 DIYSRLLKDRIILLGTEIDDEVANLVVAQLLFLQAEDPEKDISLYINSPGGS 69
>gi|326391008|ref|ZP_08212557.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus JW 200]
gi|392940442|ref|ZP_10306086.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter siderophilus SR4]
gi|325992953|gb|EGD51396.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus JW 200]
gi|392292192|gb|EIW00636.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter siderophilus SR4]
Length = 195
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LY+NS G + F
Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPGGSITAGF 75
>gi|345017119|ref|YP_004819472.1| ATP-dependent Clp protease proteolytic subunit
[Thermoanaerobacter wiegelii Rt8.B1]
gi|344032462|gb|AEM78188.1| ATP-dependent Clp protease proteolytic subunit
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 195
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LY+NS G + F
Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPGGSITAGF 75
>gi|167038050|ref|YP_001665628.1| ATP-dependent Clp protease proteolytic subunit
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167040915|ref|YP_001663900.1| ATP-dependent Clp protease proteolytic subunit
[Thermoanaerobacter sp. X514]
gi|256752437|ref|ZP_05493296.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus CCSD1]
gi|300914951|ref|ZP_07132267.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X561]
gi|307723815|ref|YP_003903566.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X513]
gi|320116459|ref|YP_004186618.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|226706551|sp|B0KBA4.1|CLPP_THEP3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706552|sp|B0K533.1|CLPP_THEPX RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166855155|gb|ABY93564.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X514]
gi|166856884|gb|ABY95292.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256748706|gb|EEU61751.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus CCSD1]
gi|300889886|gb|EFK85032.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X561]
gi|307580876|gb|ADN54275.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X513]
gi|319929550|gb|ADV80235.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 195
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LY+NS G + F
Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPGGSITAGF 75
>gi|289577854|ref|YP_003476481.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermoanaerobacter italicus Ab9]
gi|297544142|ref|YP_003676444.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|289527567|gb|ADD01919.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter italicus Ab9]
gi|296841917|gb|ADH60433.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 195
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LY+NS G + F
Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPGGSITAGF 75
>gi|337288342|ref|YP_004627814.1| ATP-dependent Clp protease proteolytic subunit
[Thermodesulfobacterium sp. OPB45]
gi|334902080|gb|AEH22886.1| ATP-dependent Clp protease proteolytic subunit
[Thermodesulfobacterium geofontis OPF15]
Length = 194
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RIV++G + +V L++A+ LYL+ ED +K I LY+NS G
Sbjct: 20 DIYSRLLKERIVFIGTTIDENVANLVIAQLLYLEAEDPDKDIMLYINSPG 69
>gi|118579613|ref|YP_900863.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
propionicus DSM 2379]
gi|166201831|sp|A1AN85.1|CLPP_PELPD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118502323|gb|ABK98805.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pelobacter
propionicus DSM 2379]
Length = 199
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++LG V LI+A+ L+L+ ED +K I+LY+NS G
Sbjct: 18 DIYSRLLKERIIFLGGGIDDQVANLIIAQLLFLEAEDPDKDIHLYINSPG 67
>gi|42781876|ref|NP_979123.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus ATCC 10987]
gi|67460501|sp|Q736T1.1|CLPP1_BACC1 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|42737800|gb|AAS41731.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus ATCC 10987]
Length = 193
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ EDAEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTXAGF 75
>gi|411118195|ref|ZP_11390576.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
gi|410711919|gb|EKQ69425.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
Length = 207
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG + L++A+ L+L ED EK IYLY+NS G +
Sbjct: 23 DIYSRLLRERIVFLGQQVDSDLANLVVAQLLFLDAEDPEKDIYLYINSPGGS 74
>gi|254410742|ref|ZP_05024520.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Coleofasciculus chthonoplastes PCC 7420]
gi|196182097|gb|EDX77083.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Coleofasciculus chthonoplastes PCC 7420]
Length = 202
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG + LI+A+ L+L+ +D EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQQVDSDLANLIVAQLLFLEADDPEKDIYLYINSPGGS 68
>gi|345858360|ref|ZP_08810754.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus sp. OT]
gi|344328554|gb|EGW39938.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus sp. OT]
Length = 205
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG + V L++A+ L+L+ ED EK I LY+NS G +
Sbjct: 20 DIYSRLLKDRIIFLGGAIDDDVSNLVVAQMLFLEAEDPEKDINLYINSPGGS 71
>gi|332707230|ref|ZP_08427283.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
gi|332353964|gb|EGJ33451.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
Length = 200
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG + L++A+ L+L+ +D EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQQVDSDLANLVVAQLLFLEADDQEKDIYLYINSPGGS 68
>gi|150020876|ref|YP_001306230.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
melanesiensis BI429]
gi|149793397|gb|ABR30845.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosipho
melanesiensis BI429]
Length = 202
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV+LG + V LI+A+ L+L+ ED +K I LY+NS G +
Sbjct: 24 DIYSRLLKDRIVFLGSAIDDHVANLIVAQLLFLEAEDPDKDIQLYINSPGGS 75
>gi|427724491|ref|YP_007071768.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
gi|427356211|gb|AFY38934.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
Length = 218
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
DL S L + RI++LG + +V + I+A+ L+L EDAEK I +Y+NS G +
Sbjct: 42 DLYSRLLRERIIFLGSAIDDTVADSIVAQLLFLDAEDAEKDIQIYVNSPGGS 93
>gi|427707070|ref|YP_007049447.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp.
PCC 7107]
gi|427359575|gb|AFY42297.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp.
PCC 7107]
Length = 201
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG ++ LI+A+ L+L ED EK IY+Y+NS G +
Sbjct: 17 DIYSRLLRERIIFLGQQIDSNLANLIVAQMLFLDAEDPEKDIYMYINSPGGS 68
>gi|422340211|ref|ZP_16421165.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fusobacterium nucleatum subsp. polymorphum F0401]
gi|355370151|gb|EHG17539.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fusobacterium nucleatum subsp. polymorphum F0401]
Length = 193
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+++G + +V I+A+ LYL+ ED+EK I +Y+NS G +
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDSEKDIIMYINSPGGS 69
>gi|385784973|ref|YP_005761146.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis N920143]
gi|339895229|emb|CCB54551.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus lugdunensis N920143]
Length = 195
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG + +V I+++ L+LQ +D EK IYLY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDFEKDIYLYINSPGGSVTAGF 75
>gi|310641963|ref|YP_003946721.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|386040947|ref|YP_005959901.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
gi|309246913|gb|ADO56480.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|343096985|emb|CCC85194.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
Length = 194
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
TA + D+ S L K+RIV++G + + I+A+ L+L ED EK IY+Y+NS G +
Sbjct: 12 TAQGERSYDIYSRLLKDRIVFVGATIDDQLANSIIAQLLFLAAEDPEKDIYMYINSPGGS 71
Query: 68 EVGSF 72
F
Sbjct: 72 TSAGF 76
>gi|408417896|ref|YP_006759310.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfobacula toluolica Tol2]
gi|405105109|emb|CCK78606.1| ClpP: ATP-dependent Clp protease, proteolytic subunit
[Desulfobacula toluolica Tol2]
Length = 207
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+++G + + LI+A+FL+L+ ED EK I Y+NS G
Sbjct: 19 DIYSRLLKDRIIFIGSAIDDEIANLIVAQFLFLESEDPEKDISFYINSPG 68
>gi|146295915|ref|YP_001179686.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|166201809|sp|A4XHW0.1|CLPP_CALS8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|145409491|gb|ABP66495.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 195
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV L + LI+A+ L+L+ ED +K IYLY+NS G + F
Sbjct: 20 DIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPGGSVTAGF 76
>gi|312128165|ref|YP_003993039.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor hydrothermalis 108]
gi|312134617|ref|YP_004001955.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor owensensis OL]
gi|312792981|ref|YP_004025904.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|344996808|ref|YP_004799151.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor lactoaceticus 6A]
gi|311774668|gb|ADQ04155.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor owensensis OL]
gi|311778184|gb|ADQ07670.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor hydrothermalis 108]
gi|312180121|gb|ADQ40291.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|343965027|gb|AEM74174.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor lactoaceticus 6A]
Length = 195
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV L + LI+A+ L+L+ ED +K IYLY+NS G + F
Sbjct: 20 DIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPGGSVTAGF 76
>gi|222528715|ref|YP_002572597.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor bescii DSM 6725]
gi|312622971|ref|YP_004024584.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor kronotskyensis 2002]
gi|222455562|gb|ACM59824.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor bescii DSM 6725]
gi|312203438|gb|ADQ46765.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor kronotskyensis 2002]
Length = 195
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV L + LI+A+ L+L+ ED +K IYLY+NS G + F
Sbjct: 20 DIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPGGSVTAGF 76
>gi|325107893|ref|YP_004268961.1| ATP-dependent Clp protease proteolytic subunit ClpP [Planctomyces
brasiliensis DSM 5305]
gi|324968161|gb|ADY58939.1| ATP-dependent Clp protease proteolytic subunit ClpP [Planctomyces
brasiliensis DSM 5305]
Length = 202
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
E+ D+ S L K+RI++LG ++ I+A+ LYLQ++D + I++Y+NS G
Sbjct: 12 NGREERAMDIYSRLLKDRIIFLGTQVNDTISNSIVAQLLYLQFDDPKSDIHMYINSPG 69
>gi|374997740|ref|YP_004973239.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus orientis DSM 765]
gi|357216106|gb|AET70724.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus orientis DSM 765]
Length = 204
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG + V L++A+ L+L+ ED EK I LY+NS G +
Sbjct: 20 DIYSRLLKDRIIFLGGAIDDDVANLVVAQMLFLEAEDPEKDINLYINSPGGS 71
>gi|169831635|ref|YP_001717617.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Desulforudis audaxviator MP104C]
gi|169638479|gb|ACA59985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Desulforudis audaxviator MP104C]
Length = 198
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
TA + D+ S L K+RIV++G V LI+A+ L+L+ ED +K I+LY+NS G
Sbjct: 12 TARGERAYDIYSRLLKDRIVFIGGPIEDHVANLIIAQLLFLEAEDPDKDIHLYINSPG 69
>gi|403381812|ref|ZP_10923869.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus sp. JC66]
Length = 193
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV++G + ++ I+A+ L+LQ ED +K I++Y+NS G + F
Sbjct: 19 DIYSRLLKDRIVFVGAAIDDALANSIVAQLLFLQAEDPDKDIHMYINSPGGSTSAGF 75
>gi|386822500|ref|ZP_10109707.1| ATP-dependent Clp protease proteolytic subunit [Serratia
plymuthica PRI-2C]
gi|386380574|gb|EIJ21304.1| ATP-dependent Clp protease proteolytic subunit [Serratia
plymuthica PRI-2C]
Length = 193
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L ++RI++L ++ EL+ A+ L+L+ E+ EKPI+LY+NS G F
Sbjct: 19 DIYSRLLRDRIIFLNGEVNDAIAELVCAQLLFLEAENPEKPIHLYINSPGGAITSGF 75
>gi|302871325|ref|YP_003839961.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor obsidiansis OB47]
gi|302574184|gb|ADL41975.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor obsidiansis OB47]
Length = 195
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV L + LI+A+ L+L+ ED +K IYLY+NS G + F
Sbjct: 20 DIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPGGSVTAGF 76
>gi|392427640|ref|YP_006468634.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfosporosinus acidiphilus SJ4]
gi|391357603|gb|AFM43302.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfosporosinus acidiphilus SJ4]
Length = 207
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG V L++A+ L+L+ ED EK I LY+NS G +
Sbjct: 20 DIYSRLLKDRIIFLGGGIDDDVANLVVAQMLFLEAEDPEKDINLYINSPGGS 71
>gi|307151649|ref|YP_003887033.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
gi|306981877|gb|ADN13758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
Length = 228
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG + +V + I+A+ LYL ED EK I LY+NS G +
Sbjct: 42 DIYSRLLRERIVFLGTAIDDNVADSIVAQLLYLDAEDPEKDIQLYINSPGGS 93
>gi|440717427|ref|ZP_20897917.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodopirellula baltica SWK14]
gi|449132358|ref|ZP_21768459.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodopirellula europaea 6C]
gi|436437613|gb|ELP31239.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodopirellula baltica SWK14]
gi|448888399|gb|EMB18718.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodopirellula europaea 6C]
Length = 195
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ E+ D+ S L K+RI++LG + ++A+ L+LQ +D +K I++
Sbjct: 3 VIPYVVESNGREERTYDIYSRLLKDRIIFLGQQVDDQISNALVAQMLFLQADDPKKDIHM 62
Query: 60 YLNSTGTT 67
Y+NS G +
Sbjct: 63 YINSPGGS 70
>gi|421783030|ref|ZP_16219482.1| ATP-dependent Clp protease proteolytic subunit 1 [Serratia
plymuthica A30]
gi|407754736|gb|EKF64867.1| ATP-dependent Clp protease proteolytic subunit 1 [Serratia
plymuthica A30]
Length = 193
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L ++RI++L ++ EL+ A+ L+L+ E+ EKPI+LY+NS G F
Sbjct: 19 DIYSRLLRDRIIFLNGEVNDAIAELVCAQLLFLEAENPEKPIHLYINSPGGAITSGF 75
>gi|431795130|ref|YP_007222035.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430785356|gb|AGA70639.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 202
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG V +I+A+ L+L+ ED EK I+LY+NS G +
Sbjct: 20 DIYSRLLKDRIIFLGGPVSDDVANVIVAQLLFLEAEDPEKDIFLYINSPGGS 71
>gi|270261418|ref|ZP_06189691.1| ATP-dependent Clp protease proteolytic subunit 1 [Serratia
odorifera 4Rx13]
gi|270044902|gb|EFA17993.1| ATP-dependent Clp protease proteolytic subunit 1 [Serratia
odorifera 4Rx13]
Length = 197
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L ++RI++L ++ EL+ A+ L+L+ E+ EKPI+LY+NS G F
Sbjct: 23 DIYSRLLRDRIIFLNGEVNDAIAELVCAQLLFLEAENPEKPIHLYINSPGGAITSGF 79
>gi|218440358|ref|YP_002378687.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanothece
sp. PCC 7424]
gi|218173086|gb|ACK71819.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7424]
Length = 203
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L ++RIV+LG + I+A+ L+L+ ED +K IYLY+NS G +
Sbjct: 17 DIYSRLLRDRIVFLGQEVTNDLANTIVAQLLFLESEDPDKDIYLYINSPGGS 68
>gi|32476643|ref|NP_869637.1| ATP-dependent Clp protease proteolytic subunit [Rhodopirellula
baltica SH 1]
gi|417303475|ref|ZP_12090530.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodopirellula baltica WH47]
gi|421609953|ref|ZP_16051138.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodopirellula baltica SH28]
gi|67460512|sp|Q7UK66.1|CLPP2_RHOBA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|32447189|emb|CAD77015.1| ATP-dependent clp protease proteolytic subunit [Rhodopirellula
baltica SH 1]
gi|327540248|gb|EGF26837.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodopirellula baltica WH47]
gi|408499333|gb|EKK03807.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodopirellula baltica SH28]
Length = 195
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ E+ D+ S L K+RI++LG + ++A+ L+LQ +D +K I++
Sbjct: 3 VIPYVVESNGREERTYDIYSRLLKDRIIFLGQQVDDQISNALVAQMLFLQADDPKKDIHM 62
Query: 60 YLNSTGTT 67
Y+NS G +
Sbjct: 63 YINSPGGS 70
>gi|225850859|ref|YP_002731093.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Persephonella marina EX-H1]
gi|225644930|gb|ACO03116.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Persephonella marina EX-H1]
Length = 202
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+ LG + LI+A+ L+L+ ED EK IY+Y+NS G
Sbjct: 28 DIYSRLLKDRIIMLGFPIDDHIANLIIAQLLFLESEDPEKDIYMYINSPG 77
>gi|392403477|ref|YP_006440089.1| ATP-dependent Clp protease proteolytic subunit ClpP [Turneriella
parva DSM 21527]
gi|390611431|gb|AFM12583.1| ATP-dependent Clp protease proteolytic subunit ClpP [Turneriella
parva DSM 21527]
Length = 203
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG + +I+A+ L+L+ ED EK IYLY+NS G
Sbjct: 19 DIYSRLLKDRIIFLGFQLDDAYANVIIAQLLFLESEDPEKDIYLYINSPG 68
>gi|402574685|ref|YP_006624028.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfosporosinus meridiei DSM 13257]
gi|402255882|gb|AFQ46157.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfosporosinus meridiei DSM 13257]
Length = 203
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG V L++A+ L+L+ ED EK I LY+NS G +
Sbjct: 20 DIYSRLLKDRIIFLGGGIDDDVANLVVAQMLFLEAEDPEKDINLYINSPGGS 71
>gi|427702648|ref|YP_007045870.1| protease subunit of ATP-dependent protease [Cyanobium gracile PCC
6307]
gi|427345816|gb|AFY28529.1| protease subunit of ATP-dependent protease [Cyanobium gracile PCC
6307]
Length = 223
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V EL++A+ LYL++++ EKPI+ Y+NSTGT+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELVIAQLLYLEFDNPEKPIFFYINSTGTS 81
>gi|15615680|ref|NP_243984.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
halodurans C-125]
gi|18203165|sp|Q9K888.1|CLPP2_BACHD RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|10175740|dbj|BAB06837.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
halodurans C-125]
Length = 194
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L K+RIV+LG + + I+A+ L+L+ E+ +K IYLY+NS G + F +
Sbjct: 20 DIYSRLLKDRIVFLGAAIDDQIANSIVAQLLFLEAENPKKDIYLYINSPGGSTSAGFAIY 79
Query: 76 ALVFFQISSIN 86
+ F SI+
Sbjct: 80 DTMQFVKPSIH 90
>gi|94987236|ref|YP_595169.1| protease subunit of ATP-dependent Clp proteases [Lawsonia
intracellularis PHE/MN1-00]
gi|442556076|ref|YP_007365901.1| ATP-dependent Clp protease, proteolytic subunit [Lawsonia
intracellularis N343]
gi|116243147|sp|Q1MQ79.1|CLPP_LAWIP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|94731485|emb|CAJ54848.1| Protease subunit of ATP-dependent Clp proteases [Lawsonia
intracellularis PHE/MN1-00]
gi|441493523|gb|AGC50217.1| ATP-dependent Clp protease, proteolytic subunit [Lawsonia
intracellularis N343]
Length = 209
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV LG V LI A+ L+L+ +D EK IYLY+NS G +
Sbjct: 24 DIYSRLLKDRIVLLGTEVNDQVASLICAQLLFLESQDPEKEIYLYINSPGGS 75
>gi|403385525|ref|ZP_10927582.1| ATP-dependent Clp protease proteolytic subunit [Kurthia sp. JC30]
Length = 201
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+ LG + +V I+++ L+L+ ED EK IYLY+NS G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANAIVSQLLFLEAEDPEKDIYLYINSPG 68
>gi|434386911|ref|YP_007097522.1| protease subunit of ATP-dependent protease [Chamaesiphon minutus
PCC 6605]
gi|428017901|gb|AFY93995.1| protease subunit of ATP-dependent protease [Chamaesiphon minutus
PCC 6605]
Length = 223
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPSVR----------ELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVY+G V S +L++A+ LYLQ+++ EKPIY Y+NSTGT+
Sbjct: 26 KERIVYMGGPLVSSDDYKRQMGYDPTKLLIAQLLYLQFDNPEKPIYFYINSTGTS 80
>gi|427706272|ref|YP_007048649.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp.
PCC 7107]
gi|427358777|gb|AFY41499.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp.
PCC 7107]
Length = 232
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + +V I+A+ L+L EDAEK I LY+NS G +
Sbjct: 45 DIYSRLLRERIIFLGTAIDDTVANSIVAQLLFLDSEDAEKDIQLYINSPGGS 96
>gi|403669499|ref|ZP_10934703.1| ATP-dependent Clp protease proteolytic subunit [Kurthia sp. JC8E]
Length = 196
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+ LG + +V I+++ L+L+ ED EK IYLY+NS G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANAIVSQLLFLEAEDPEKDIYLYINSPG 68
>gi|298490862|ref|YP_003721039.1| ATP-dependent Clp protease proteolytic subunit ClpP ['Nostoc
azollae' 0708]
gi|298232780|gb|ADI63916.1| ATP-dependent Clp protease, proteolytic subunit ClpP ['Nostoc
azollae' 0708]
Length = 201
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + LI+A+ L+L ED EK IY+Y+NS G +
Sbjct: 17 DIYSRLLRERIIFLGQQVDSGLANLIVAQLLFLDAEDPEKDIYMYINSPGGS 68
>gi|210615408|ref|ZP_03290535.1| hypothetical protein CLONEX_02751 [Clostridium nexile DSM 1787]
gi|210150257|gb|EEA81266.1| hypothetical protein CLONEX_02751 [Clostridium nexile DSM 1787]
Length = 193
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T+ + D+ S L K RI++LG + +I+A+ L+L+ ED EK I+L
Sbjct: 3 VIPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVTDASASVIIAQLLFLEGEDPEKDIHL 62
Query: 60 YLNSTGTT 67
Y+NS G +
Sbjct: 63 YINSPGGS 70
>gi|170078144|ref|YP_001734782.1| Clp protease [Synechococcus sp. PCC 7002]
gi|169885813|gb|ACA99526.1| Clp protease [Synechococcus sp. PCC 7002]
Length = 197
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG + +V + ++A+ L+L EDA+K I LY+NS G +
Sbjct: 21 DIYSRLLRERIVFLGTAIDDTVADSVVAQLLFLDAEDADKDIQLYINSPGGS 72
>gi|159903902|ref|YP_001551246.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9211]
gi|159889078|gb|ABX09292.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
MIT 9211]
Length = 223
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ LYL++++ +KP+Y Y+NSTGT+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIVAQLLYLEFDNPDKPVYFYINSTGTS 81
>gi|365174864|ref|ZP_09362302.1| ATP-dependent Clp protease proteolytic subunit [Synergistes sp.
3_1_syn1]
gi|363613729|gb|EHL65234.1| ATP-dependent Clp protease proteolytic subunit [Synergistes sp.
3_1_syn1]
Length = 194
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG + +V L++A+ L+L+ ED +K I LY+NS G +
Sbjct: 20 DIYSRLLKDRIIFLGTAIDDTVANLVVAQMLFLESEDPDKDISLYINSPGGS 71
>gi|217077313|ref|YP_002335031.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus TCF52B]
gi|419759889|ref|ZP_14286174.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus H17ap60334]
gi|217037168|gb|ACJ75690.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosipho
africanus TCF52B]
gi|407514928|gb|EKF49714.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus H17ap60334]
Length = 201
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV+LG + V L++A+ L+L+ ED +K I LY+NS G +
Sbjct: 24 DIYSRLLKDRIVFLGSAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPGGS 75
>gi|16332037|ref|NP_442765.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
gi|383323780|ref|YP_005384634.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326949|ref|YP_005387803.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492833|ref|YP_005410510.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384438101|ref|YP_005652826.1| ATP-dependent protease [Synechocystis sp. PCC 6803]
gi|451816189|ref|YP_007452641.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
gi|1705930|sp|P54416.1|CLPP1_SYNY3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|1001349|dbj|BAA10836.1| ATP-dependent protease; ClpP [Synechocystis sp. PCC 6803]
gi|339275134|dbj|BAK51621.1| ATP-dependent protease [Synechocystis sp. PCC 6803]
gi|359273100|dbj|BAL30619.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359276270|dbj|BAL33788.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359279440|dbj|BAL36957.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407960326|dbj|BAM53566.1| ATP-dependent protease ClpP [Bacillus subtilis BEST7613]
gi|451782158|gb|AGF53127.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
Length = 198
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG L++A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQEVRDENANLVVAQLLFLEAEDPEKDIYLYINSPGGS 68
>gi|373495484|ref|ZP_09586069.1| ATP-dependent Clp protease proteolytic subunit [Eubacterium
infirmum F0142]
gi|371964962|gb|EHO82466.1| ATP-dependent Clp protease proteolytic subunit [Eubacterium
infirmum F0142]
Length = 192
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S + K+RI++LG V L++A+ L+L ED+EK I LY+NS G +
Sbjct: 19 DIYSRMLKDRIIFLGDEIDDHVANLVVAQLLFLDAEDSEKDINLYINSPGGS 70
>gi|406908934|gb|EKD49303.1| ATP-dependent Clp protease proteolytic subunit, partial
[uncultured bacterium]
Length = 147
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
+A+ + D+ S L K+RIV+LG V +I+A+ L+L+ ED K I+ Y+NS G
Sbjct: 11 SAYGERAYDIYSRLLKDRIVFLGGQIDDQVANIIIAQMLFLESEDKNKDIHFYVNSPG 68
>gi|308069047|ref|YP_003870652.1| ATP-dependent Clp protease proteolytic subunit (endopeptidase
Clp) [Paenibacillus polymyxa E681]
gi|305858326|gb|ADM70114.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Paenibacillus polymyxa E681]
Length = 194
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
TA + D+ S L K+RIV++G + + I+A+ L+L ED EK IY+Y+NS G +
Sbjct: 12 TAQGERSYDIYSRLLKDRIVFVGAAIDDHLANSIIAQLLFLAAEDPEKEIYMYINSPGGS 71
Query: 68 EVGSF 72
F
Sbjct: 72 TSAGF 76
>gi|428225971|ref|YP_007110068.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
gi|427985872|gb|AFY67016.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
Length = 200
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + LI+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSKLLQERIIFLGQPVDSDLANLIVAQLLFLEAEDPEKDIYLYINSPGGS 68
>gi|397905705|ref|ZP_10506547.1| ATP-dependent Clp protease proteolytic subunit [Caloramator
australicus RC3]
gi|397161224|emb|CCJ33882.1| ATP-dependent Clp protease proteolytic subunit [Caloramator
australicus RC3]
Length = 196
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
TA + D+ S L K RI++LG L++A+ L+L+ ED +K IYLY+NS G
Sbjct: 11 TARGERSYDIYSRLLKERIIFLGDEINDQTANLVIAQLLFLESEDPDKDIYLYINSPG 68
>gi|288554081|ref|YP_003426016.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
pseudofirmus OF4]
gi|288545241|gb|ADC49124.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
pseudofirmus OF4]
Length = 195
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+A+ L+LQ ED EK I LY+NS G +
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLQAEDPEKDISLYINSPGGS 70
>gi|406927441|gb|EKD63473.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 205
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 2 IPFTSG---------TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYED 52
IP TS TA + D+ S L K+RI++LG + +V LI+A+ L+L+ E+
Sbjct: 8 IPLTSSILVPTVLEKTAQGERSYDIYSRLLKDRIIFLGTAIDGNVANLIIAQLLFLENEN 67
Query: 53 AEKPIYLYLNSTG 65
+K I +Y+NS G
Sbjct: 68 PKKDITMYINSPG 80
>gi|42525082|ref|NP_970462.1| ATP-dependent Clp protease proteolytic subunit [Bdellovibrio
bacteriovorus HD100]
gi|60389658|sp|Q6MH11.1|CLPP_BDEBA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|39577293|emb|CAE81116.1| ATP-dependent Clp protease proteolytic subunit [Bdellovibrio
bacteriovorus HD100]
Length = 212
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+ LG + V I+A+ L+L+ ++ EKPI+LY+NS G
Sbjct: 30 DIYSRLLKDRIIILGTAVTDEVANSIIAQMLFLEVDNPEKPIHLYINSPG 79
>gi|114567171|ref|YP_754325.1| ATP-dependent Clp protease proteolytic subunit [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
gi|122317850|sp|Q0AWF0.1|CLPP_SYNWW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114338106|gb|ABI68954.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 200
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG +V L++A+ L+L+ ED +K I LY+NS G +
Sbjct: 20 DIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPGGS 71
>gi|443324640|ref|ZP_21053379.1| protease subunit of ATP-dependent protease [Xenococcus sp. PCC
7305]
gi|442795739|gb|ELS05087.1| protease subunit of ATP-dependent protease [Xenococcus sp. PCC
7305]
Length = 199
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 21 LYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
LY+ RI++LG + I+A LYL ED+ KPIYLY+NS G +
Sbjct: 27 LYRERIIFLGRGVNDGIANQIIAIMLYLDSEDSSKPIYLYINSPGGS 73
>gi|338811972|ref|ZP_08624171.1| ATP-dependent Clp protease proteolytic subunit [Acetonema longum
DSM 6540]
gi|337275941|gb|EGO64379.1| ATP-dependent Clp protease proteolytic subunit [Acetonema longum
DSM 6540]
Length = 202
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RIV++G ++ L++A+ L+L+ ED EK I+LY+NS G
Sbjct: 19 DIYSRLLKDRIVFIGGPIDDTMANLVIAQLLFLESEDPEKDIHLYINSPG 68
>gi|220932330|ref|YP_002509238.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Halothermothrix orenii H 168]
gi|259585957|sp|B8CY74.1|CLPP_HALOH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|219993640|gb|ACL70243.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Halothermothrix orenii H 168]
Length = 198
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV+LG + LI+A+ L+L+ ED +K I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIVFLGHPINDELSNLIIAQLLFLEAEDPDKDIHLYINSPGGS 70
>gi|81301334|ref|YP_401542.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|81170215|gb|ABB58555.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
elongatus PCC 7942]
Length = 244
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG +V + I+A+ L+L+ ED EK I LY+NS G +
Sbjct: 57 DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGS 108
>gi|56751593|ref|YP_172294.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|3023500|sp|O34125.1|CLPP2_SYNE7 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|67460442|sp|Q5N1P6.1|CLPP3_SYNP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|15620530|gb|AAL03914.1|U30252_2 ClpP2 [Synechococcus elongatus PCC 7942]
gi|2351823|gb|AAB68677.1| ATP-dependent Clp protease, proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|56686552|dbj|BAD79774.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
Length = 240
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG +V + I+A+ L+L+ ED EK I LY+NS G +
Sbjct: 53 DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGS 104
>gi|332708809|ref|ZP_08428780.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
gi|332352351|gb|EGJ31920.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
Length = 230
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG V + I+A+ LYL+ ED EK I LY+NS G +
Sbjct: 44 DIYSRLLRERIVFLGTQVDDVVADSIVAQLLYLEAEDEEKDIQLYINSPGGS 95
>gi|238926240|ref|ZP_04658000.1| endopeptidase Clp [Selenomonas flueggei ATCC 43531]
gi|238885920|gb|EEQ49558.1| endopeptidase Clp [Selenomonas flueggei ATCC 43531]
Length = 197
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++LG SV +I+A+ L+L+ ED +K I+LY+NS G
Sbjct: 14 DIYSRLLKERIIFLGGPIDDSVANVIVAQMLFLESEDPDKDIHLYINSPG 63
>gi|423593290|ref|ZP_17569321.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD048]
gi|401226956|gb|EJR33486.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD048]
Length = 193
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T + D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+L
Sbjct: 3 VIPYVIEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDTEKDIFL 62
Query: 60 YLNSTGTTEVGSF 72
Y+NS G + F
Sbjct: 63 YINSPGGSTTAGF 75
>gi|404496730|ref|YP_006720836.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
metallireducens GS-15]
gi|418065321|ref|ZP_12702695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens RCH3]
gi|90101408|sp|Q39UH2.1|CLPP_GEOMG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78194335|gb|ABB32102.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens GS-15]
gi|373562499|gb|EHP88710.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens RCH3]
Length = 199
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG V L++A+ L+L+ ED +K I+LY+NS G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDHVANLVIAQLLFLEAEDPDKDIHLYINSPG 67
>gi|334134662|ref|ZP_08508166.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
gi|333607817|gb|EGL19127.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
Length = 195
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV+LG + V I+A+ L+L+ ED +K I LY+NS G + F
Sbjct: 20 DIYSRLLKDRIVFLGAAIDDQVANSIIAQLLFLEAEDPQKEISLYINSPGGSTSAGF 76
>gi|284929721|ref|YP_003422243.1| ATP-dependent Clp protease proteolytic subunit ClpP
[cyanobacterium UCYN-A]
gi|284810165|gb|ADB95862.1| ATP-dependent Clp protease proteolytic subunit ClpP
[cyanobacterium UCYN-A]
Length = 200
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG LI+A+ L+L+ ED E+ IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPERDIYLYINSPGGS 68
>gi|126657142|ref|ZP_01728313.1| ATP-dependent protease; ClpP [Cyanothece sp. CCY0110]
gi|126621685|gb|EAZ92395.1| ATP-dependent protease; ClpP [Cyanothece sp. CCY0110]
Length = 147
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG LI+A+ L+L+ ED +K IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPDKDIYLYINSPGGS 68
>gi|428206835|ref|YP_007091188.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
gi|428008756|gb|AFY87319.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
Length = 210
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG +V + I+A+ L+L+ ED EK I+LY+NS G +
Sbjct: 23 DIYSRLLRERIVFLGTPVDDAVADSIVAQLLFLEAEDPEKDIHLYINSPGGS 74
>gi|224178037|ref|YP_002600892.1| proteolytic subunit 2 of clp protease [Pyramimonas parkeae]
gi|215882704|gb|ACJ71077.1| proteolytic subunit 2 of clp protease [Pyramimonas parkeae]
Length = 198
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 12 QPPP---DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTE 68
+P P DL + LY+ R+++LG + ++ LYL ED K +Y+Y+NS G
Sbjct: 15 EPAPQWIDLYNRLYRERVLFLGSDLDDELANQLVGIMLYLSAEDESKRLYIYINSPG--- 71
Query: 69 VGSFLCHALVFFQISSINAS 88
GS C V+ + +NAS
Sbjct: 72 -GSVTCGIAVYDAMQHVNAS 90
>gi|428774097|ref|YP_007165885.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cyanobacterium stanieri PCC 7202]
gi|428688376|gb|AFZ48236.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cyanobacterium stanieri PCC 7202]
Length = 199
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 21 LYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
LY+ RI++LG S+ I+A LYL ED KPIYLY+NS G +
Sbjct: 27 LYRERIIFLGRGVNDSLANQIIAVMLYLDSEDNNKPIYLYINSPGGS 73
>gi|15643458|ref|NP_228504.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
maritima MSB8]
gi|148269380|ref|YP_001243840.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
petrophila RKU-1]
gi|170288038|ref|YP_001738276.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp.
RQ2]
gi|281411923|ref|YP_003346002.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
naphthophila RKU-10]
gi|418045135|ref|ZP_12683231.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
maritima MSB8]
gi|6685314|sp|Q9WZF9.1|CLPP_THEMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214719|sp|A5IJ91.1|CLPP_THEP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706553|sp|B1L812.1|CLPP_THESQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|4981218|gb|AAD35777.1|AE001741_10 ATP-dependent Clp protease, proteolytic subunit [Thermotoga
maritima MSB8]
gi|147734924|gb|ABQ46264.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
petrophila RKU-1]
gi|170175541|gb|ACB08593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
sp. RQ2]
gi|281373026|gb|ADA66588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
naphthophila RKU-10]
gi|351678217|gb|EHA61364.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
maritima MSB8]
Length = 203
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV+LG V L++A+ L+L+ ED +K +YLY+NS G +
Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPGGS 79
>gi|56750021|ref|YP_170722.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81300363|ref|YP_400571.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|1705929|sp|P54415.1|CLPP1_SYNE7 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|67460444|sp|Q5N665.1|CLPP1_SYNP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|755165|gb|AAC67306.1| ClpP [Synechococcus elongatus PCC 7942]
gi|56684980|dbj|BAD78202.1| ATP-dependent protease ClpP [Synechococcus elongatus PCC 6301]
gi|81169244|gb|ABB57584.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Synechococcus elongatus PCC 7942]
Length = 197
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG V I+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIIFLGEPVTSDVANRIVAQLLFLEAEDPEKDIYLYINSPGGS 68
>gi|67924586|ref|ZP_00518001.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|416404722|ref|ZP_11687744.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
gi|67853560|gb|EAM48904.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|357261483|gb|EHJ10747.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
Length = 202
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG LI+A+ L+L+ ED +K IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPDKDIYLYINSPGGS 68
>gi|172035557|ref|YP_001802058.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|354554806|ref|ZP_08974109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
gi|171697011|gb|ACB49992.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|353552960|gb|EHC22353.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
Length = 202
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG LI+A+ L+L+ ED +K IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPDKDIYLYINSPGGS 68
>gi|304437034|ref|ZP_07396997.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
gi|304369985|gb|EFM23647.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
Length = 203
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++LG SV +I+A+ L+L+ ED +K I+LY+NS G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVIVAQMLFLESEDPDKDIHLYINSPG 69
>gi|224367556|ref|YP_002601719.1| protein ClpP1 [Desulfobacterium autotrophicum HRM2]
gi|259585947|sp|C0QGT0.1|CLPP_DESAH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|223690272|gb|ACN13555.1| ClpP1 [Desulfobacterium autotrophicum HRM2]
Length = 205
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG + V LI+A+ L+L+ ED EK I Y+NS G
Sbjct: 19 DIYSRLLKDRIIFLGSAMDDEVANLIVAQLLFLESEDPEKDINFYINSPG 68
>gi|443476633|ref|ZP_21066529.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena
biceps PCC 7429]
gi|443018385|gb|ELS32644.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena
biceps PCC 7429]
Length = 223
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG + LI+++ L+L+ ED +K IYLY+NS G +
Sbjct: 38 DIFSRLLRERIVFLGSQVDDTTANLIMSQLLFLEAEDPDKDIYLYINSPGGS 89
>gi|60416366|sp|Q8RC25.2|CLPP_THETN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 195
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LY+NS G +
Sbjct: 19 DIFSRLLKDRIVFLGDEINDTTASLVIAQMLFLEAEDPDKDIWLYINSPGGS 70
>gi|226311381|ref|YP_002771275.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
gi|226094329|dbj|BAH42771.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
Length = 193
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + LI+A+ L+LQ ED +K I LY+NS G +
Sbjct: 18 DIYSRLLKDRIILLGTEIDDEIANLIVAQLLFLQAEDPDKDISLYINSPGGS 69
>gi|20807119|ref|NP_622290.1| ATP-dependent Clp protease proteolytic subunit
[Thermoanaerobacter tengcongensis MB4]
gi|20515613|gb|AAM23894.1| Protease subunit of ATP-dependent Clp proteases
[Thermoanaerobacter tengcongensis MB4]
Length = 198
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LY+NS G +
Sbjct: 22 DIFSRLLKDRIVFLGDEINDTTASLVIAQMLFLEAEDPDKDIWLYINSPGGS 73
>gi|403387723|ref|ZP_10929780.1| ATP-dependent Clp protease proteolytic subunit [Clostridium sp.
JC122]
Length = 194
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K RI++LG + LI+A+ L+L+ ED +K IYLY+NS G +
Sbjct: 19 DIYSRLLKERIIFLGEEVNSTTASLIVAQLLFLESEDPDKDIYLYINSPGGS 70
>gi|182414555|ref|YP_001819621.1| endopeptidase Clp [Opitutus terrae PB90-1]
gi|177841769|gb|ACB76021.1| Endopeptidase Clp [Opitutus terrae PB90-1]
Length = 206
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
T + D+ S L K+RI+++G +V L++A+ +LQ ED +K I LY+NS G
Sbjct: 12 TGRGERSMDIYSRLLKDRIIFIGSPIDDTVANLVIAQMFFLQMEDPKKDIQLYINSPGGV 71
Query: 68 EVGSFLCHALVFF 80
G + + F
Sbjct: 72 VTGGMAIYDTMNF 84
>gi|148241695|ref|YP_001226852.1| ATP-dependent Clp protease-like protein [Synechococcus sp.
RCC307]
gi|147850005|emb|CAK27499.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
Length = 224
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V ELI+A+ LYL++++ +KPI+ Y+NSTGT+
Sbjct: 31 KERIVYLGLPLFSDDDAKRQMGVDVTELIIAQLLYLEFDNPDKPIFFYINSTGTS 85
>gi|332798601|ref|YP_004460100.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|438001582|ref|YP_007271325.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|332696336|gb|AEE90793.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|432178376|emb|CCP25349.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
Length = 194
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K RI+++G S +V L +A+ LYL+ ED +K I LY+NS G +
Sbjct: 19 DIYSRLLKERIIFIGTSIDDTVASLAIAQMLYLESEDPDKDIRLYINSPGGS 70
>gi|310778378|ref|YP_003966711.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ilyobacter
polytropus DSM 2926]
gi|309747701|gb|ADO82363.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ilyobacter
polytropus DSM 2926]
Length = 199
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L ++RI++LG V I+A+ L+L+ EDAEK I +Y+NS G G
Sbjct: 18 DIYSRLLRDRIIFLGTEIDDRVANSIVAQLLFLEAEDAEKDIIMYINSPGGVITGGM 74
>gi|428771384|ref|YP_007163174.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cyanobacterium aponinum PCC 10605]
gi|428685663|gb|AFZ55130.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cyanobacterium aponinum PCC 10605]
Length = 199
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 21 LYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
LY+ RI++LG S+ I+A LYL ED KPIYLY+NS G +
Sbjct: 27 LYRERIIFLGRGVNDSLANQIIAVMLYLDSEDNSKPIYLYINSPGGS 73
>gi|386774657|ref|ZP_10097035.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Brachybacterium paraconglomeratum LC44]
Length = 200
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L +RIVY+G V ++A+ L+L+ E A+ PI+LYLNS+G
Sbjct: 22 DVFSRLLSDRIVYVGTPIDDGVANTVIAQILHLENESADAPIHLYLNSSG 71
>gi|160902469|ref|YP_001568050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Petrotoga
mobilis SJ95]
gi|160360113|gb|ABX31727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Petrotoga
mobilis SJ95]
Length = 205
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG---TTEVGSF 72
D+ S L K+RIV+LG V +I+A+ L+L+ +D +K I+LY+NS G T+ +G +
Sbjct: 20 DIYSRLLKDRIVFLGTPINDDVANVIIAQLLFLESQDPDKDIFLYINSPGGSVTSGLGIY 79
Query: 73 LCHALVFFQISSI 85
V IS+I
Sbjct: 80 DTMQYVKPDISTI 92
>gi|15895898|ref|NP_349247.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum ATCC 824]
gi|337737851|ref|YP_004637298.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum DSM 1731]
gi|384459361|ref|YP_005671781.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum EA 2018]
gi|18202304|sp|P58276.1|CLPP_CLOAB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|15025667|gb|AAK80587.1|AE007761_6 Protease subunits of ATP-dependent protease, ClpP [Clostridium
acetobutylicum ATCC 824]
gi|325510050|gb|ADZ21686.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum EA 2018]
gi|336292077|gb|AEI33211.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum DSM 1731]
Length = 193
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+R+++LG + L++A+ L+L+ ED +K IYLY+NS G +
Sbjct: 19 DIYSRLLKDRVIFLGEEVNDTTASLVVAQLLFLESEDPDKDIYLYINSPGGS 70
>gi|410659338|ref|YP_006911709.1| ATP-dependent Clp protease proteolytic subunit [Dehalobacter sp.
DCA]
gi|410662325|ref|YP_006914696.1| ATP-dependent Clp protease proteolytic subunit [Dehalobacter sp.
CF]
gi|409021693|gb|AFV03724.1| ATP-dependent Clp protease proteolytic subunit [Dehalobacter sp.
DCA]
gi|409024681|gb|AFV06711.1| ATP-dependent Clp protease proteolytic subunit [Dehalobacter sp.
CF]
Length = 209
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 37/52 (71%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG + +V +++A+ L+L+ ED EK +++Y+NS G +
Sbjct: 20 DIYSRLLKDRIIFLGGAIDDNVANVVVAQLLFLEAEDPEKDVFIYINSPGGS 71
>gi|304407481|ref|ZP_07389133.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus curdlanolyticus YK9]
gi|304343432|gb|EFM09274.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus curdlanolyticus YK9]
Length = 193
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG---TTEVGSF 72
D+ S L K+RI++LG + V I+A+ L+L +D EK I+LY+NS G T +G F
Sbjct: 19 DIYSRLLKDRIIFLGSAIDDDVANSIIAQLLFLAADDPEKDIHLYINSPGGSVTAGMGIF 78
Query: 73 LCHALVFFQISSI 85
+ +S+I
Sbjct: 79 DTMQFIKPDVSTI 91
>gi|406836610|ref|ZP_11096204.1| endopeptidase Clp [Schlesneria paludicola DSM 18645]
Length = 201
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
++ D+ S L ++RI+ LG + V I+A+ LYLQ+ED++ I++Y+NS G +
Sbjct: 12 NGRDERAMDIYSRLLRDRIILLGSAINDDVSNSIVAQLLYLQFEDSKADIHMYINSPGGS 71
>gi|403715325|ref|ZP_10941072.1| ATP-dependent Clp protease proteolytic subunit [Kineosphaera
limosa NBRC 100340]
gi|403210761|dbj|GAB95755.1| ATP-dependent Clp protease proteolytic subunit [Kineosphaera
limosa NBRC 100340]
Length = 197
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 2 IPF-TSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
IP+ T+ TA + D+ S L +R+VYLG V I+A+ ++L+ + E+P+ LY
Sbjct: 6 IPYVTTRTAQGERTVDIYSRLLADRVVYLGTGIDDGVANAIIAQLIHLESDSTEQPVQLY 65
Query: 61 LNSTG 65
+NS G
Sbjct: 66 INSPG 70
>gi|386388774|ref|ZP_10073627.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus paraphrohaemolyticus HK411]
gi|385697288|gb|EIG27723.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus paraphrohaemolyticus HK411]
Length = 197
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 11 EQPPP-----DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
EQ P D+ S L K RI++L ++ LI+A+ L+L+ ED EK IYLY+NS G
Sbjct: 9 EQTPKGERSYDIFSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPG 68
>gi|383761649|ref|YP_005440631.1| ATP-dependent Clp protease proteolytic subunit [Caldilinea
aerophila DSM 14535 = NBRC 104270]
gi|381381917|dbj|BAL98733.1| ATP-dependent Clp protease proteolytic subunit [Caldilinea
aerophila DSM 14535 = NBRC 104270]
Length = 223
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K RIV+LG V LI+A+ LYL ED +PI +Y+NS G +
Sbjct: 23 DIYSLLLKERIVFLGTPINDQVANLIVAQLLYLNGEDPNQPINMYINSPGGS 74
>gi|39996891|ref|NP_952842.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
sulfurreducens PCA]
gi|409912312|ref|YP_006890777.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
sulfurreducens KN400]
gi|60389697|sp|Q74C82.1|CLPP_GEOSL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|39983779|gb|AAR35169.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
sulfurreducens PCA]
gi|298505904|gb|ADI84627.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
sulfurreducens KN400]
Length = 199
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG V L++A+ L+L+ ED +K I+LY+NS G
Sbjct: 18 DIYSRLLKDRIIFLGGPVDDHVANLVIAQMLFLEAEDPDKDIHLYINSPG 67
>gi|453062000|gb|EMF02995.1| ATP-dependent Clp protease proteolytic subunit [Serratia
marcescens VGH107]
Length = 193
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L ++RIV+L V E++ A+ L+L+ E+ EKPI+LY+NS G
Sbjct: 19 DIYSRLLRDRIVFLNGEVNDDVAEMLCAQLLFLEAENPEKPIHLYINSPG 68
>gi|218248285|ref|YP_002373656.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|257060388|ref|YP_003138276.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
gi|218168763|gb|ACK67500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|256590554|gb|ACV01441.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
Length = 201
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG LI+A+ L+L+ ED +K IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQEVRDENANLIVAQLLFLEAEDPDKDIYLYINSPGGS 68
>gi|448241757|ref|YP_007405810.1| ATP-dependent Clp protease proteolytic subunit [Serratia
marcescens WW4]
gi|445212121|gb|AGE17791.1| ATP-dependent Clp protease proteolytic subunit [Serratia
marcescens WW4]
Length = 197
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L ++RIV+L V E++ A+ L+L+ E+ EKPI+LY+NS G
Sbjct: 23 DIYSRLLRDRIVFLNGEVNDDVAEMLCAQLLFLEAENPEKPIHLYINSPG 72
>gi|443324676|ref|ZP_21053413.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
gi|442795717|gb|ELS05067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
Length = 219
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + V + ++A+ LYL+ ED EK I LY+NS G +
Sbjct: 42 DIYSRLLRERIIFLGTAIDDKVADSVVAQLLYLEAEDPEKDIQLYINSPGGS 93
>gi|383784111|ref|YP_005468680.1| ATP-dependent Clp protease, proteolytic subunit [Leptospirillum
ferrooxidans C2-3]
gi|383083023|dbj|BAM06550.1| ATP-dependent Clp protease, proteolytic subunit [Leptospirillum
ferrooxidans C2-3]
Length = 200
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K RI++LG +V L++A+ L+L+ EDA K I +Y+NS G F
Sbjct: 18 DIYSRLLKERIIFLGTPIDDNVANLVIAQLLFLESEDASKDINIYINSPGGVVTAGF 74
>gi|357009842|ref|ZP_09074841.1| ATP-dependent Clp protease proteolytic subunit 1 [Paenibacillus
elgii B69]
Length = 192
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L K+RIV+LG V I A+ L L ED EK I+LY+NS G + F +
Sbjct: 19 DIYSRLLKDRIVFLGSEIDDQVANSITAQLLLLSAEDPEKDIHLYINSPGGSTTAGFAIY 78
Query: 76 ALVFF 80
+ F
Sbjct: 79 DTMQF 83
>gi|56964790|ref|YP_176521.1| ATP-dependent Clp protease proteolytic subunit [Bacillus clausii
KSM-K16]
gi|67460456|sp|Q5WDK0.1|CLPP2_BACSK RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|56911033|dbj|BAD65560.1| ATP-dependent Clp protease proteolytic subunit [Bacillus clausii
KSM-K16]
Length = 195
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG +V I+A+ L+LQ ED EK I LY+NS G +
Sbjct: 19 DIYSRLLKDRIIMLGSGVDDNVANSIVAQMLFLQAEDPEKDISLYINSPGGS 70
>gi|302391290|ref|YP_003827110.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Acetohalobium arabaticum DSM 5501]
gi|302203367|gb|ADL12045.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Acetohalobium arabaticum DSM 5501]
Length = 199
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV++G + L++A+ L+L+ ED +K IY+Y+NS G +
Sbjct: 20 DIYSRLLKDRIVFIGSPINDEIANLVIAQLLFLEAEDPDKDIYIYINSPGGS 71
>gi|18203597|sp|Q9X5N0.1|CLPP2_MYXXA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|4838463|gb|AAD31002.1|AF127082_1 ATP-dependent protease proteolytic subunit ClpP [Myxococcus
xanthus DZF1]
Length = 206
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV LG V +I+A+ L+L+ ED +K I LY+NS G +
Sbjct: 21 DIISRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPGGS 72
>gi|434399019|ref|YP_007133023.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
gi|428270116|gb|AFZ36057.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
Length = 227
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG V + I+A+ LYL+ ED EK I LY+NS G +
Sbjct: 41 DIYSRLLRERIVFLGTPIDDKVADSIVAQLLYLEAEDPEKDIQLYINSPGGS 92
>gi|429737530|ref|ZP_19271388.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 138 str. F0429]
gi|429152336|gb|EKX95166.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 138 str. F0429]
Length = 197
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++LG SV +++A+ L+L+ ED +K I+LY+NS G
Sbjct: 14 DIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPG 63
>gi|425465976|ref|ZP_18845279.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9809]
gi|389831694|emb|CCI25350.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9809]
Length = 233
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG V + I+A+ LYL+ ED EK I LY+NS G +
Sbjct: 47 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPGGS 98
>gi|425445342|ref|ZP_18825374.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9443]
gi|425453823|ref|ZP_18833576.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9807]
gi|389734665|emb|CCI01691.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9443]
gi|389800128|emb|CCI20438.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9807]
Length = 233
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG V + I+A+ LYL+ ED EK I LY+NS G +
Sbjct: 47 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPGGS 98
>gi|357419906|ref|YP_004932898.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovirga
lienii DSM 17291]
gi|355397372|gb|AER66801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovirga
lienii DSM 17291]
Length = 192
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RIV++G + + L++A+ L+L+ ED EK +Y+Y+NS G
Sbjct: 18 DIYSRLLKDRIVFIGEAIDDHLANLVVAQLLFLESEDPEKDVYVYINSPG 67
>gi|323448447|gb|EGB04345.1| hypothetical protein AURANDRAFT_32730 [Aureococcus
anophagefferens]
Length = 197
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ + LY+ RI++LG + I+ LYL ED+ KPIYLY+N G GS +
Sbjct: 22 DIYNRLYRERIIFLGQEIDDELANQIIGVMLYLDSEDSTKPIYLYINCPG----GSVIAG 77
Query: 76 ALVFFQISSINAS 88
+F ++ I +
Sbjct: 78 LAIFDTMNHIKSK 90
>gi|78188367|ref|YP_378705.1| peptidase S14, ClpP [Chlorobium chlorochromatii CaD3]
gi|90101406|sp|Q3ATL3.1|CLPP_CHLCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78170566|gb|ABB27662.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
chlorochromatii CaD3]
Length = 225
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG V LI+A+ ++L+ ED E+ IY+Y+NS G +
Sbjct: 44 DIFSRLLRERIIFLGTGIDEHVAGLIMAQLIFLESEDPERDIYIYINSPGGS 95
>gi|392959640|ref|ZP_10325122.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans DSM 17108]
gi|421052494|ref|ZP_15515483.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelosinus
fermentans B4]
gi|421058665|ref|ZP_15521332.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans B3]
gi|421066386|ref|ZP_15528000.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A12]
gi|421070550|ref|ZP_15531682.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A11]
gi|392443225|gb|EIW20776.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelosinus
fermentans B4]
gi|392448176|gb|EIW25379.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A11]
gi|392456193|gb|EIW32947.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans DSM 17108]
gi|392456278|gb|EIW33029.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A12]
gi|392460320|gb|EIW36635.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans B3]
Length = 201
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+++G +V L++A+ L+L+ ED EK I++Y+NS G
Sbjct: 19 DIFSRLLKDRIIFIGGPIDDNVANLVIAQLLFLESEDPEKDIHVYINSPG 68
>gi|255102472|ref|ZP_05331449.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-63q42]
Length = 194
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG + LI+A+ L+L+ ED +K I+LY+NS G +
Sbjct: 19 DIFSRLLKDRIIFLGDQVNDATAGLIVAQLLFLEAEDPDKDIHLYINSPGGS 70
>gi|292670226|ref|ZP_06603652.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
ATCC 43541]
gi|292648178|gb|EFF66150.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
ATCC 43541]
Length = 197
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++LG SV +++A+ L+L+ ED +K I+LY+NS G
Sbjct: 14 DIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKDIHLYINSPG 63
>gi|116747551|ref|YP_844238.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Syntrophobacter fumaroxidans MPOB]
gi|166214718|sp|A0LEF1.1|CLPP_SYNFM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116696615|gb|ABK15803.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophobacter fumaroxidans MPOB]
Length = 202
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L ++RI++LG + V +I+A+ L+L+ ED +K I+ Y+NS G
Sbjct: 19 DIYSRLLRDRIIFLGTAITDEVANVIIAQLLFLESEDPDKDIHFYINSPG 68
>gi|402817756|ref|ZP_10867343.1| ATP-dependent Clp protease proteolytic subunit 2 [Paenibacillus
alvei DSM 29]
gi|402504728|gb|EJW15256.1| ATP-dependent Clp protease proteolytic subunit 2 [Paenibacillus
alvei DSM 29]
Length = 192
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV++G S+ I+A+ L L ED++K IY+Y+NS G + F
Sbjct: 20 DIYSRLLKDRIVFVGSEITDSLANSIVAQLLLLAAEDSDKDIYMYINSPGGSVTAGF 76
>gi|387773849|ref|ZP_10129134.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
parahaemolyticus HK385]
gi|386903670|gb|EIJ68477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
parahaemolyticus HK385]
Length = 197
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 11 EQPPP-----DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
EQ P D+ S L K RI++L ++ LI+A+ L+L+ ED EK IYLY+NS G
Sbjct: 9 EQTPKGERSYDIFSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPG 68
>gi|373457870|ref|ZP_09549637.1| ATP-dependent Clp protease proteolytic subunit [Caldithrix abyssi
DSM 13497]
gi|371719534|gb|EHO41305.1| ATP-dependent Clp protease proteolytic subunit [Caldithrix abyssi
DSM 13497]
Length = 206
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RIV+LG +V LI+++ L+L+ ED K IYLY+NS G
Sbjct: 19 DIYSRLLKERIVFLGTPIDDNVASLIISQLLFLEAEDPTKDIYLYINSPG 68
>gi|333372559|ref|ZP_08464484.1| ATP-dependent Clp protease, protease subunit [Desmospora sp.
8437]
gi|332972924|gb|EGK10866.1| ATP-dependent Clp protease, protease subunit [Desmospora sp.
8437]
Length = 206
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG +V I+A+ L+LQ ED K I LY+NS G +
Sbjct: 31 DIYSRLLKDRIIFLGSEINDAVANTIVAQMLFLQTEDPNKDIQLYINSPGGS 82
>gi|167855227|ref|ZP_02477997.1| bifunctional indole-3-glycerol phosphate
synthase/phosphoribosylanthranilate isomerase
[Haemophilus parasuis 29755]
gi|167853680|gb|EDS24924.1| bifunctional indole-3-glycerol phosphate
synthase/phosphoribosylanthranilate isomerase
[Haemophilus parasuis 29755]
Length = 193
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++L + +LI+A+ L+L+ ED EK IYLY+NS G
Sbjct: 19 DIYSRLLKERIIFLNGGVEDEMAKLIIAQMLFLEAEDPEKDIYLYINSPG 68
>gi|157364285|ref|YP_001471052.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
lettingae TMO]
gi|167008651|sp|A8F754.1|CLPP_THELT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157314889|gb|ABV33988.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
lettingae TMO]
Length = 199
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV+LG + V L++A+ L+L+ ED +K I LY+NS G +
Sbjct: 23 DIYSRLLKDRIVFLGYAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPGGS 74
>gi|219872047|ref|YP_002476422.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
parasuis SH0165]
gi|254763791|sp|B8F822.1|CLPP_HAEPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|219692251|gb|ACL33474.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
parasuis SH0165]
Length = 193
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++L + +LI+A+ L+L+ ED EK IYLY+NS G
Sbjct: 19 DIYSRLLKERIIFLNGGVEDEMAKLIIAQMLFLEAEDPEKDIYLYINSPG 68
>gi|218885218|ref|YP_002434539.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|226706450|sp|B8DNL4.1|CLPP_DESVM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|218756172|gb|ACL07071.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 201
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG V LI A+ L+L+ E+ EK IYLY+NS G +
Sbjct: 18 DIYSRLLKDRIILLGTPIDDQVASLICAQLLFLESENPEKEIYLYINSPGGS 69
>gi|166369013|ref|YP_001661286.1| ATP-dependent Clp protease proteolytic subunit 2 [Microcystis
aeruginosa NIES-843]
gi|390442513|ref|ZP_10230504.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis sp. T1-4]
gi|422303000|ref|ZP_16390356.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9806]
gi|425435289|ref|ZP_18815746.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9432]
gi|425439908|ref|ZP_18820220.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9717]
gi|425452211|ref|ZP_18832029.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 7941]
gi|425458445|ref|ZP_18837933.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9808]
gi|425472440|ref|ZP_18851281.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9701]
gi|440754784|ref|ZP_20933986.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa TAIHU98]
gi|166091386|dbj|BAG06094.1| ATP-dependent Clp protease proteolytic subunit 2 [Microcystis
aeruginosa NIES-843]
gi|389680218|emb|CCH91098.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9432]
gi|389719747|emb|CCH96448.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9717]
gi|389766108|emb|CCI08183.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 7941]
gi|389792060|emb|CCI12154.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9806]
gi|389822691|emb|CCI29606.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9808]
gi|389834168|emb|CCI34630.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis sp. T1-4]
gi|389881467|emb|CCI37973.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Microcystis aeruginosa PCC 9701]
gi|440174990|gb|ELP54359.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa TAIHU98]
Length = 233
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG V + I+A+ LYL+ ED EK I LY+NS G +
Sbjct: 47 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPGGS 98
>gi|428776590|ref|YP_007168377.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece
sp. PCC 7418]
gi|428690869|gb|AFZ44163.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece
sp. PCC 7418]
Length = 200
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 21 LYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
LY+ RI++LG S+ ++A LYL ED KPIYLY+NS G +
Sbjct: 27 LYRERIIFLGRGINDSLANQVIAVMLYLDSEDPSKPIYLYINSPGGS 73
>gi|126700924|ref|YP_001089821.1| ATP-dependent Clp protease proteolytic subunit 1 [Clostridium
difficile 630]
gi|254976904|ref|ZP_05273376.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-66c26]
gi|255094290|ref|ZP_05323768.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CIP 107932]
gi|255308377|ref|ZP_05352548.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile ATCC 43255]
gi|255316044|ref|ZP_05357627.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-76w55]
gi|255518701|ref|ZP_05386377.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-97b34]
gi|255651823|ref|ZP_05398725.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-37x79]
gi|255657263|ref|ZP_05402672.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-23m63]
gi|260684849|ref|YP_003216134.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260688507|ref|YP_003219641.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|296451896|ref|ZP_06893613.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296879709|ref|ZP_06903684.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
gi|306521610|ref|ZP_07407957.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-32g58]
gi|384362518|ref|YP_006200370.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile BI1]
gi|423081791|ref|ZP_17070390.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|423085912|ref|ZP_17074347.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
gi|423089385|ref|ZP_17077744.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
gi|115252361|emb|CAJ70202.1| ATP-dependent Clp protease proteolytic subunit 1 [Clostridium
difficile 630]
gi|260211012|emb|CBA66324.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260214524|emb|CBE07039.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|296259278|gb|EFH06156.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296429298|gb|EFH15170.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
gi|357548303|gb|EHJ30169.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
gi|357549864|gb|EHJ31702.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|357558182|gb|EHJ39684.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
Length = 194
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG + LI+A+ L+L+ ED +K I+LY+NS G +
Sbjct: 19 DIFSRLLKDRIIFLGDQVNDATAGLIVAQLLFLEAEDPDKDIHLYINSPGGS 70
>gi|357059570|ref|ZP_09120412.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas
infelix ATCC 43532]
gi|355371647|gb|EHG18991.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas
infelix ATCC 43532]
Length = 203
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++LG SV +++A+ L+L+ ED +K I+LY+NS G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPG 69
>gi|393199477|ref|YP_006461319.1| protease subunit of ATP-dependent Clp protease [Solibacillus
silvestris StLB046]
gi|406666669|ref|ZP_11074434.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
isronensis B3W22]
gi|327438808|dbj|BAK15173.1| protease subunit of ATP-dependent Clp protease [Solibacillus
silvestris StLB046]
gi|405385439|gb|EKB44873.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
isronensis B3W22]
Length = 196
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG +V I+A+ L+L+ ED +K IYLY+NS G +
Sbjct: 19 DIYSRLLKDRIILLGSGIDDNVANSIVAQLLFLEAEDPDKDIYLYINSPGGS 70
>gi|313894919|ref|ZP_07828479.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 137 str. F0430]
gi|402301976|ref|ZP_10821097.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC9]
gi|312976600|gb|EFR42055.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 137 str. F0430]
gi|400381261|gb|EJP34064.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC9]
Length = 205
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++LG SV +++A+ L+L+ ED +K I+LY+NS G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKDIHLYINSPG 69
>gi|218440073|ref|YP_002378402.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanothece
sp. PCC 7424]
gi|218172801|gb|ACK71534.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7424]
Length = 229
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG + +V + I+A+ LYL ED EK I +Y+NS G +
Sbjct: 42 DIYSRLLRERIVFLGTAIDDNVADSIVAQLLYLDAEDPEKDIQIYINSPGGS 93
>gi|401565794|ref|ZP_10806612.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC6]
gi|400185000|gb|EJO19235.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC6]
Length = 203
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++LG SV +++A+ L+L+ ED +K I+LY+NS G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPG 69
>gi|315648325|ref|ZP_07901425.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus vortex V453]
gi|315276260|gb|EFU39604.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus vortex V453]
Length = 193
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV++G + ++ I+A+ L+L ED EK I++Y+NS G + F
Sbjct: 19 DIYSRLLKDRIVFVGAAIDDAIANSIIAQLLFLAAEDPEKDIHMYINSPGGSVSAGF 75
>gi|19705312|ref|NP_602807.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|237742958|ref|ZP_04573439.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
4_1_13]
gi|254302272|ref|ZP_04969630.1| S14 family endopeptidase ClpP [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|289766533|ref|ZP_06525911.1| endopeptidase Clp [Fusobacterium sp. D11]
gi|296328560|ref|ZP_06871079.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|423137615|ref|ZP_17125258.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. animalis F0419]
gi|22653693|sp|Q8RHJ8.1|CLPP_FUSNN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|19713281|gb|AAL94106.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|148322464|gb|EDK87714.1| S14 family endopeptidase ClpP [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|229430606|gb|EEO40818.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
4_1_13]
gi|289718088|gb|EFD82100.1| endopeptidase Clp [Fusobacterium sp. D11]
gi|296154369|gb|EFG95168.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|371959667|gb|EHO77345.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. animalis F0419]
Length = 193
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +Y+NS G +
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGS 69
>gi|237743260|ref|ZP_04573741.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
7_1]
gi|260495117|ref|ZP_05815246.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fusobacterium sp. 3_1_33]
gi|422939797|ref|ZP_16967169.1| ATP-dependent Clp protease, protease subunit [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
gi|229433039|gb|EEO43251.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
7_1]
gi|260197560|gb|EEW95078.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fusobacterium sp. 3_1_33]
gi|339890648|gb|EGQ79742.1| ATP-dependent Clp protease, protease subunit [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
Length = 193
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +Y+NS G +
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGS 69
>gi|34762747|ref|ZP_00143736.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|256846930|ref|ZP_05552384.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fusobacterium sp. 3_1_36A2]
gi|294784271|ref|ZP_06749566.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fusobacterium sp. 3_1_27]
gi|421144657|ref|ZP_15604566.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. fusiforme ATCC 51190]
gi|27887597|gb|EAA24677.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|256717728|gb|EEU31287.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fusobacterium sp. 3_1_36A2]
gi|294488137|gb|EFG35488.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fusobacterium sp. 3_1_27]
gi|395488964|gb|EJG09810.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. fusiforme ATCC 51190]
Length = 193
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +Y+NS G +
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGS 69
>gi|421527266|ref|ZP_15973870.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum ChDC F128]
gi|402256700|gb|EJU07178.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum ChDC F128]
Length = 193
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +Y+NS G +
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGS 69
>gi|423482542|ref|ZP_17459232.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG6X1-2]
gi|401143846|gb|EJQ51380.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG6X1-2]
Length = 193
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ +G V ++A+ L+L+ E+AEK I+LY+NS G + F
Sbjct: 19 DIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAENAEKDIFLYINSPGGSTTAGF 75
>gi|422344962|ref|ZP_16425885.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
F0398]
gi|355376104|gb|EHG23365.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
F0398]
Length = 203
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++LG SV +++A+ L+L+ ED +K I+LY+NS G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKDIHLYINSPG 69
>gi|333926787|ref|YP_004500366.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp.
AS12]
gi|333931741|ref|YP_004505319.1| ATP-dependent Clp protease proteolytic subunit [Serratia
plymuthica AS9]
gi|386328610|ref|YP_006024780.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp.
AS13]
gi|333473348|gb|AEF45058.1| ATP-dependent Clp protease proteolytic subunit [Serratia
plymuthica AS9]
gi|333490847|gb|AEF50009.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp.
AS12]
gi|333960943|gb|AEG27716.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp.
AS13]
Length = 197
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L ++RI++L ++ EL+ A+ L+L+ E+ EKP++LY+NS G F
Sbjct: 23 DIYSRLLRDRIIFLNGEVNDAIAELVCAQLLFLEAENPEKPMHLYINSPGGAITSGF 79
>gi|336401433|ref|ZP_08582202.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
21_1A]
gi|336161020|gb|EGN64036.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
21_1A]
Length = 193
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +Y+NS G +
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGS 69
>gi|334128684|ref|ZP_08502565.1| ATP-dependent Clp protease, protease subunit [Centipeda
periodontii DSM 2778]
gi|333386421|gb|EGK57635.1| ATP-dependent Clp protease, protease subunit [Centipeda
periodontii DSM 2778]
Length = 203
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++LG SV +++A+ L+L+ ED +K I+LY+NS G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPG 69
>gi|296123572|ref|YP_003631350.1| endopeptidase Clp [Planctomyces limnophilus DSM 3776]
gi|296015912|gb|ADG69151.1| Endopeptidase Clp [Planctomyces limnophilus DSM 3776]
Length = 202
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
++ D+ S L ++RI+ LG +V I+A+ L+LQ+ED++ I+LY+NS G +
Sbjct: 12 NGRDERAMDIYSRLLRDRIIILGSGIDDTVANTIVAQLLFLQFEDSKADIHLYINSPGGS 71
>gi|449017357|dbj|BAM80759.1| ATP-dependent Clp protease proteolytic subunit [Cyanidioschyzon
merolae strain 10D]
Length = 255
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ + +Y+ RI++LG + I+A LYL ED KPIYLY+NS G + V
Sbjct: 79 DIYNRMYRERIIFLGSELDDELANQIIAVMLYLDSEDNTKPIYLYINSPGGSVVAGL 135
>gi|398815689|ref|ZP_10574354.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Brevibacillus sp. BC25]
gi|398034174|gb|EJL27450.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Brevibacillus sp. BC25]
Length = 193
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + L++A+ L+LQ ED +K I LY+NS G +
Sbjct: 18 DIYSRLLKDRIILLGTEIDDEIANLVVAQLLFLQAEDPDKDISLYINSPGGS 69
>gi|121534156|ref|ZP_01665981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosinus
carboxydivorans Nor1]
gi|121307259|gb|EAX48176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosinus
carboxydivorans Nor1]
Length = 203
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RIV++G V L++A+ L+L+ ED +K I+LY+NS G
Sbjct: 19 DIYSRLLKDRIVFIGGPIDDHVANLVIAQLLFLESEDPDKDIHLYINSPG 68
>gi|78357263|ref|YP_388712.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
alaskensis G20]
gi|90101407|sp|Q30Z79.1|CLPP_DESDG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78219668|gb|ABB39017.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfovibrio alaskensis G20]
Length = 200
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+ LG +V LI A+ L+L+ E+ EK IYLY+NS G
Sbjct: 18 DIYSRLLKDRIILLGTPVDDNVASLICAQLLFLESENPEKEIYLYINSPG 67
>gi|336420043|ref|ZP_08600289.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fusobacterium sp. 11_3_2]
gi|336162184|gb|EGN65166.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fusobacterium sp. 11_3_2]
Length = 193
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +Y+NS G +
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGS 69
>gi|443660052|ref|ZP_21132510.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa DIANCHI905]
gi|159030460|emb|CAO91362.1| clpP2 [Microcystis aeruginosa PCC 7806]
gi|443332568|gb|ELS47168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa DIANCHI905]
Length = 233
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG V + I+A+ LYL+ ED EK I LY+NS G +
Sbjct: 47 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPGGS 98
>gi|15616126|ref|NP_244431.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
halodurans C-125]
gi|11386690|sp|Q9K709.1|CLPP1_BACHD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|10176188|dbj|BAB07283.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
halodurans C-125]
Length = 194
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+ LG + +V I+A+ L+LQ ED +K I LY+NS G
Sbjct: 19 DIYSRLLKDRIIMLGTAIDDNVANSIVAQLLFLQAEDPDKDISLYINSPG 68
>gi|365873788|ref|ZP_09413321.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio velox DSM 12556]
gi|363983875|gb|EHM10082.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio velox DSM 12556]
Length = 194
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+++G + L++A+ L+L+ ED +K +YLY+NS G
Sbjct: 20 DIYSRLLKDRIIFIGQEIDDHLANLVVAQLLFLESEDPDKDVYLYINSPG 69
>gi|260435297|ref|ZP_05789267.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. WH 8109]
gi|260413171|gb|EEX06467.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. WH 8109]
Length = 205
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + I+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 25 DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGS 76
>gi|251797042|ref|YP_003011773.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Paenibacillus sp. JDR-2]
gi|247544668|gb|ACT01687.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus sp. JDR-2]
Length = 194
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV+LG + V I+A+ L+L ED +K I LY+NS G + F
Sbjct: 20 DIYSRLLKDRIVFLGSAIDDQVANSIVAQLLFLAAEDPDKEISLYINSPGGSTTAGF 76
>gi|428201398|ref|YP_007079987.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
gi|427978830|gb|AFY76430.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
Length = 272
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L + RIV+LG V + I+A+ LYL ED EK I LY+NS G + F
Sbjct: 85 DIYSRLLRERIVFLGTPIDDKVADSIVAQLLYLDAEDPEKDIQLYINSPGGSVYAGF 141
>gi|110596915|ref|ZP_01385205.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
ferrooxidans DSM 13031]
gi|110341602|gb|EAT60062.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
ferrooxidans DSM 13031]
Length = 225
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG V LI+A+ ++L+ ED E+ IY+Y+NS G +
Sbjct: 44 DIFSRLLRERIIFLGNGIDEHVAGLIMAQLIFLESEDPERDIYIYINSPGGS 95
>gi|78212970|ref|YP_381749.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9605]
gi|78197429|gb|ABB35194.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. CC9605]
Length = 218
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + I+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 38 DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGS 89
>gi|78186273|ref|YP_374316.1| peptidase S14, ClpP [Chlorobium luteolum DSM 273]
gi|115311788|sp|Q3B5V8.1|CLPP_PELLD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78166175|gb|ABB23273.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
luteolum DSM 273]
Length = 225
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG V LI+A+ ++L+ ED E+ IY+Y+NS G +
Sbjct: 44 DIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPERDIYIYVNSPGGS 95
>gi|118444381|ref|YP_878863.1| ATP-dependent Clp protease proteolytic subunit [Clostridium novyi
NT]
gi|166201817|sp|A0Q2L1.1|CLPP_CLONN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118134837|gb|ABK61881.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
novyi NT]
Length = 195
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG L++A+ L+L+ ED +K IYLY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGEEVNDVTASLVVAQLLFLEAEDPDKDIYLYINSPGGS 70
>gi|119357822|ref|YP_912466.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
phaeobacteroides DSM 266]
gi|166201813|sp|A1BI15.1|CLPP_CHLPD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|119355171|gb|ABL66042.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
phaeobacteroides DSM 266]
Length = 227
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG V LI+A+ ++L+ ED E+ IY+Y+NS G +
Sbjct: 44 DIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPERDIYIYVNSPGGS 95
>gi|428771131|ref|YP_007162921.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cyanobacterium aponinum PCC 10605]
gi|428685410|gb|AFZ54877.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cyanobacterium aponinum PCC 10605]
Length = 239
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + + + I+A+ LYL+ +D EK IY+Y+NS G +
Sbjct: 48 DIYSRLLRERIIFLGTAIDDKLADSIVAQLLYLEADDPEKDIYIYINSPGGS 99
>gi|116256436|sp|Q3AJN8.2|CLPP2_SYNSC RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
Length = 197
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + I+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGS 68
>gi|357040211|ref|ZP_09102000.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
gibsoniae DSM 7213]
gi|355356875|gb|EHG04656.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
gibsoniae DSM 7213]
Length = 197
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RIV++G +V L++A+ L+L+ ED EK I +Y+NS G
Sbjct: 20 DIYSRLLKDRIVFIGGPIDDTVSNLVIAQLLFLEAEDPEKDINIYINSPG 69
>gi|262066529|ref|ZP_06026141.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fusobacterium periodonticum ATCC 33693]
gi|294783780|ref|ZP_06749104.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fusobacterium sp. 1_1_41FAA]
gi|358467634|ref|ZP_09177325.1| hypothetical protein HMPREF9093_01805 [Fusobacterium sp. oral
taxon 370 str. F0437]
gi|291379763|gb|EFE87281.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fusobacterium periodonticum ATCC 33693]
gi|294480658|gb|EFG28435.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fusobacterium sp. 1_1_41FAA]
gi|357067511|gb|EHI77623.1| hypothetical protein HMPREF9093_01805 [Fusobacterium sp. oral
taxon 370 str. F0437]
Length = 193
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +Y+NS G +
Sbjct: 18 DIYSRLLKDRIIFVGTAIDENVANSIIAQLLYLESEDPEKDIIMYINSPGGS 69
>gi|340753245|ref|ZP_08690034.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
2_1_31]
gi|422314997|ref|ZP_16396444.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
periodonticum D10]
gi|229422844|gb|EEO37891.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
2_1_31]
gi|404593038|gb|EKA94701.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
periodonticum D10]
Length = 193
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +Y+NS G +
Sbjct: 18 DIYSRLLKDRIIFVGTAIDENVANSIIAQLLYLESEDPEKDIIMYINSPGGS 69
>gi|116070498|ref|ZP_01467767.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
gi|116065903|gb|EAU71660.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
Length = 197
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + I+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGS 68
>gi|78184632|ref|YP_377067.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9902]
gi|124013818|sp|Q3AY04.1|CLPP1_SYNS9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|78168926|gb|ABB26023.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Synechococcus sp. CC9902]
Length = 197
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + I+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGS 68
>gi|329922862|ref|ZP_08278378.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
gi|328941635|gb|EGG37920.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
Length = 193
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV++G + ++ I+A+ L+L ED EK I++Y+NS G + F
Sbjct: 19 DIYSRLLKDRIVFVGAAIDDAIANSIIAQLLFLAAEDPEKDIHMYINSPGGSVSAGF 75
>gi|403379308|ref|ZP_10921365.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus sp. JC66]
Length = 194
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV++G + V L++A+ L+L +D E+ I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIVFIGSAIDDDVANLVIAQLLFLAAQDPEQDIHLYINSPGGS 70
>gi|435854701|ref|YP_007316020.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Halobacteroides halobius DSM 5150]
gi|433671112|gb|AGB41927.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Halobacteroides halobius DSM 5150]
Length = 198
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RIV++G V ++A+ L+L+ ED +K IY+Y+NS G
Sbjct: 19 DIYSRLLKDRIVFIGSEINDQVANTVIAQLLFLEAEDPDKDIYIYINSPG 68
>gi|223042116|ref|ZP_03612288.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
minor 202]
gi|240950344|ref|ZP_04754614.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Actinobacillus minor NM305]
gi|223017093|gb|EEF15533.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
minor 202]
gi|240295155|gb|EER45974.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Actinobacillus minor NM305]
Length = 197
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++L ++ LI+A+ L+L+ ED EK IYLY+NS G
Sbjct: 19 DIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPG 68
>gi|440781233|ref|ZP_20959575.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
pasteurianum DSM 525]
gi|440220838|gb|ELP60044.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
pasteurianum DSM 525]
Length = 194
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV+LG + LI+A+ L+L+ ED +K I LY+NS G +
Sbjct: 19 DIYSRLLKDRIVFLGEDVNDATASLIVAQLLFLESEDPDKDISLYINSPGGS 70
>gi|194337396|ref|YP_002019190.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309873|gb|ACF44573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelodictyon
phaeoclathratiforme BU-1]
Length = 225
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG V LI+A+ ++L+ ED E+ IY+Y+NS G +
Sbjct: 44 DIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPERDIYIYVNSPGGS 95
>gi|406906710|gb|EKD47785.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 206
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
TA + D+ S L K+RI++LG + +V LI+A+ L+L E+ +K I +Y+NS G
Sbjct: 24 TAQGERSYDIYSRLLKDRIIFLGTTIDGNVANLIIAQLLFLDNENPKKDITMYINSPG 81
>gi|339626863|ref|YP_004718506.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfobacillus acidophilus TPY]
gi|379008747|ref|YP_005258198.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Sulfobacillus acidophilus DSM 10332]
gi|339284652|gb|AEJ38763.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfobacillus acidophilus TPY]
gi|361055009|gb|AEW06526.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Sulfobacillus acidophilus DSM 10332]
Length = 203
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K RI++LG + V L++A+ L+L+ +D EK I LY+NS G +
Sbjct: 20 DIYSRLLKERIIFLGSAIDDDVANLVVAQLLFLESDDPEKDINLYINSPGGS 71
>gi|261408153|ref|YP_003244394.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus sp. Y412MC10]
gi|261284616|gb|ACX66587.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus sp. Y412MC10]
Length = 198
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV++G + ++ I+A+ L+L ED EK I++Y+NS G + F
Sbjct: 24 DIYSRLLKDRIVFVGAAIDDAIANSIIAQLLFLAAEDPEKDIHMYINSPGGSVSAGF 80
>gi|261405359|ref|YP_003241600.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus sp. Y412MC10]
gi|329923469|ref|ZP_08278950.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
gi|261281822|gb|ACX63793.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus sp. Y412MC10]
gi|328941269|gb|EGG37564.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
Length = 196
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG---TTEVGSF 72
D+ S L K+RI++L + V L++A+ L+L ED EK I LY+NS G T +G +
Sbjct: 19 DIYSRLLKDRIIFLSSAIDDDVANLVIAQLLFLAAEDPEKDISLYINSPGGSVTAGMGIY 78
Query: 73 LCHALVFFQISSI 85
L+ +S+I
Sbjct: 79 DTMQLIKPDVSTI 91
>gi|375084538|ref|ZP_09731403.1| ATP-dependent Clp protease proteolytic subunit [Megamonas
funiformis YIT 11815]
gi|374568042|gb|EHR39235.1| ATP-dependent Clp protease proteolytic subunit [Megamonas
funiformis YIT 11815]
Length = 198
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG +V +++A+ L+L+ ED +K I+LY+NS G
Sbjct: 19 DIYSRLLKDRIIFLGGPIDDNVANVVIAQLLFLESEDPDKDIHLYINSPG 68
>gi|254361750|ref|ZP_04977885.1| S14 family endopeptidase ClpP [Mannheimia haemolytica PHL213]
gi|452745422|ref|ZP_21945257.1| ATP-dependent Clp protease proteolytic subunit [Mannheimia
haemolytica serotype 6 str. H23]
gi|153093285|gb|EDN74281.1| S14 family endopeptidase ClpP [Mannheimia haemolytica PHL213]
gi|452086571|gb|EME02959.1| ATP-dependent Clp protease proteolytic subunit [Mannheimia
haemolytica serotype 6 str. H23]
Length = 197
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++L ++ LI+A+ L+L+ ED EK IYLY+NS G
Sbjct: 19 DIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPG 68
>gi|261494048|ref|ZP_05990551.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496191|ref|ZP_05992597.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261308143|gb|EEY09440.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261310214|gb|EEY11414.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 197
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++L ++ LI+A+ L+L+ ED EK IYLY+NS G
Sbjct: 19 DIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPG 68
>gi|56751582|ref|YP_172283.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81301346|ref|YP_401554.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|18203213|sp|Q9L4P3.1|CLPP3_SYNE7 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|67460443|sp|Q5N1Q7.1|CLPP2_SYNP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|7106112|emb|CAB75988.1| ATP-dependent Clp protease third proteolytic subunit
[Synechococcus elongatus PCC 7942]
gi|56686541|dbj|BAD79763.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81170227|gb|ABB58567.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Synechococcus elongatus PCC 7942]
Length = 199
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ + L RI++LG + I+A+ LYL ED+ KPIYLY+NS G +
Sbjct: 22 DIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPGGS 73
>gi|33865835|ref|NP_897394.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8102]
gi|67460510|sp|Q7U6N7.1|CLPP2_SYNPX RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|33633005|emb|CAE07816.1| ATP-dependent Clp protease proteolytic subunit 1 [Synechococcus
sp. WH 8102]
Length = 197
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + I+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGS 68
>gi|302342888|ref|YP_003807417.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfarculus baarsii DSM 2075]
gi|301639501|gb|ADK84823.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfarculus baarsii DSM 2075]
Length = 198
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
+IPF T+ + D+ S L K+RI+ LG + +V ++ A+ L+L+ ED K I+L
Sbjct: 4 LIPFVIEQTSRGERSYDIYSRLLKDRIIILGQAIDDNVANVVTAQLLFLEAEDPNKDIHL 63
Query: 60 YLNSTG 65
Y+NS G
Sbjct: 64 YINSPG 69
>gi|421074039|ref|ZP_15535081.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans JBW45]
gi|392527836|gb|EIW50920.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans JBW45]
Length = 201
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+++G +V +++A+ L+L+ ED EK I++Y+NS G
Sbjct: 19 DIFSRLLKDRIIFIGGPIDDNVANVVIAQLLFLESEDPEKDIHMYINSPG 68
>gi|304405398|ref|ZP_07387057.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus curdlanolyticus YK9]
gi|304345437|gb|EFM11272.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus curdlanolyticus YK9]
Length = 194
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV+LG + V +I A+ L+L ED +K I+ Y+NS G + F
Sbjct: 20 DIYSRLLKDRIVFLGSAIDDQVANVITAQLLFLAAEDPDKDIHFYINSPGGSTSAGF 76
>gi|225568849|ref|ZP_03777874.1| hypothetical protein CLOHYLEM_04928 [Clostridium hylemonae DSM
15053]
gi|225162348|gb|EEG74967.1| hypothetical protein CLOHYLEM_04928 [Clostridium hylemonae DSM
15053]
Length = 193
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG +I+A+ L+L+ ED EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGEEVTDVSASVIVAQLLFLEAEDPEKDIHLYINSPGGS 70
>gi|443311871|ref|ZP_21041494.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechocystis sp. PCC 7509]
gi|442778107|gb|ELR88377.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechocystis sp. PCC 7509]
Length = 219
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L + RIV+LG +V + I+A+ L+L ED EK I LY+NS G GS
Sbjct: 32 DIYSRLLRERIVFLGTQVDDAVADSIVAQLLFLDAEDPEKDIQLYINSPG----GSVTAG 87
Query: 76 ALVFFQISSIN 86
++ I I
Sbjct: 88 MAIYDTIQQIR 98
>gi|357009615|ref|ZP_09074614.1| ClpP [Paenibacillus elgii B69]
Length = 196
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG + V L++A+ L+L D EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGSAIDDDVANLVIAQLLFLSAVDPEKDIHLYINSPGGS 70
>gi|167761297|ref|ZP_02433424.1| hypothetical protein CLOSCI_03702 [Clostridium scindens ATCC
35704]
gi|167660963|gb|EDS05093.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium scindens ATCC 35704]
Length = 193
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG +I+A+ L+L+ ED EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGEEVTDVSASVIVAQLLFLEAEDPEKDIHLYINSPGGS 70
>gi|126649375|ref|ZP_01721616.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp.
B14905]
gi|169826051|ref|YP_001696209.1| ATP-dependent Clp protease proteolytic subunit [Lysinibacillus
sphaericus C3-41]
gi|226706460|sp|B1HVR0.1|CLPP_LYSSC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|126593700|gb|EAZ87623.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp.
B14905]
gi|168990539|gb|ACA38079.1| ATP-dependent Clp protease proteolytic subunit 1 [Lysinibacillus
sphaericus C3-41]
Length = 197
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+A+ L+LQ ED +K I LY+NS G +
Sbjct: 19 DIYSRLLKDRIILLGSAIDDNVANSIVAQLLFLQAEDPDKDISLYINSPGGS 70
>gi|374849800|dbj|BAL52805.1| ATP-dependent Clp protease, proteolytic subunit ClpP [uncultured
prokaryote]
Length = 201
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
TA + D+ S L K+RI++LG V L++AE L+L+ ED +K I +Y+N+ G
Sbjct: 17 TARGERAYDIYSRLLKDRIIFLGEPIDDQVANLVIAELLFLEKEDPDKDIDMYINTPG 74
>gi|310657900|ref|YP_003935621.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent
serine proteases [[Clostridium] sticklandii]
gi|308824678|emb|CBH20716.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent
serine proteases [[Clostridium] sticklandii]
Length = 194
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG LI+A+ L+L+ ED +K I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGDQVNDHTASLIVAQLLHLESEDPDKDIFLYINSPGGS 70
>gi|340751561|ref|ZP_08688371.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
mortiferum ATCC 9817]
gi|229420526|gb|EEO35573.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
mortiferum ATCC 9817]
Length = 191
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG +V I+A+ L+L+ ED EK I +Y+NS G
Sbjct: 18 DIYSRLLKDRIIFLGTEIDDNVANAIVAQLLFLEAEDPEKDIIMYINSPG 67
>gi|336422809|ref|ZP_08602950.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 5_1_57FAA]
gi|336007150|gb|EGN37176.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 5_1_57FAA]
Length = 193
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG +I+A+ L+L+ ED EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGEEVTDVSASVIVAQLLFLEAEDPEKDIHLYINSPGGS 70
>gi|354583587|ref|ZP_09002485.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus lactis 154]
gi|353197467|gb|EHB62948.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus lactis 154]
Length = 196
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG---TTEVGSF 72
D+ S L K+RI++L + V L++A+ L+L ED EK I LY+NS G T +G +
Sbjct: 19 DIYSRLLKDRIIFLSNAIDDDVANLVIAQLLFLAAEDPEKDISLYINSPGGSVTAGMGIY 78
Query: 73 LCHALVFFQISSI 85
L+ +S+I
Sbjct: 79 DTMQLIKPDVSTI 91
>gi|315645729|ref|ZP_07898853.1| hypothetical protein PVOR_09635 [Paenibacillus vortex V453]
gi|315279207|gb|EFU42517.1| hypothetical protein PVOR_09635 [Paenibacillus vortex V453]
Length = 196
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG---TTEVGSF 72
D+ S L K+RI++L + V L++A+ L+L ED EK I LY+NS G T +G +
Sbjct: 19 DIYSRLLKDRIIFLSSAIDDDVANLVIAQLLFLAAEDPEKDISLYINSPGGSVTAGMGIY 78
Query: 73 LCHALVFFQISSI 85
L+ +S+I
Sbjct: 79 DTMQLIKPDVSTI 91
>gi|299536206|ref|ZP_07049519.1| ATP-dependent Clp protease proteolytic subunit [Lysinibacillus
fusiformis ZC1]
gi|424738521|ref|ZP_18166959.1| ATP-dependent Clp protease proteolytic subunit [Lysinibacillus
fusiformis ZB2]
gi|298728192|gb|EFI68754.1| ATP-dependent Clp protease proteolytic subunit [Lysinibacillus
fusiformis ZC1]
gi|422947726|gb|EKU42118.1| ATP-dependent Clp protease proteolytic subunit [Lysinibacillus
fusiformis ZB2]
Length = 196
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+A+ L+LQ ED +K I LY+NS G +
Sbjct: 19 DIYSRLLKDRIILLGSAIDDNVANSIVAQLLFLQAEDPDKDISLYINSPGGS 70
>gi|153006264|ref|YP_001380589.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. Fw109-5]
gi|166201797|sp|A7HFV9.1|CLPP_ANADF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|152029837|gb|ABS27605.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. Fw109-5]
Length = 204
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV+LG V +++A+ L+L+ ED +K I LY+NS G +
Sbjct: 21 DIYSRLLKDRIVFLGTPIDDDVANVVIAQLLFLESEDPDKDISLYINSPGGS 72
>gi|149923964|ref|ZP_01912350.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Plesiocystis pacifica SIR-1]
gi|149815196|gb|EDM74745.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Plesiocystis pacifica SIR-1]
Length = 217
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RIV+LG V +I+A+ L+L+ ED +K I LY+NS G
Sbjct: 28 DIYSRLLKDRIVFLGDPINDRVASIIIAQLLFLESEDPDKDIRLYINSPG 77
>gi|153854553|ref|ZP_01995823.1| hypothetical protein DORLON_01818 [Dorea longicatena DSM 13814]
gi|149752862|gb|EDM62793.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Dorea
longicatena DSM 13814]
Length = 193
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG +I+A+ L+L+ ED EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGEEVTDVSASVIVAQLLFLEAEDPEKDIHLYINSPGGS 70
>gi|427393848|ref|ZP_18887488.1| ATP-dependent Clp protease proteolytic subunit [Alloiococcus
otitis ATCC 51267]
gi|425730326|gb|EKU93163.1| ATP-dependent Clp protease proteolytic subunit [Alloiococcus
otitis ATCC 51267]
Length = 197
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 8 TAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLN 62
T EQ P D+ S L K+RI+ LG + +V ++++ L+L +D++K IYLY+N
Sbjct: 6 TVIEQSPKGERAYDIYSRLLKDRIIILGDAIDNNVANSVVSQLLFLDAQDSDKDIYLYVN 65
Query: 63 STG 65
S G
Sbjct: 66 SPG 68
>gi|417852109|ref|ZP_12497751.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. gallicida str. Anand1_poultry]
gi|338217778|gb|EGP03617.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. gallicida str. Anand1_poultry]
Length = 193
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP TA + D+ S L K R+++LG + LI+A+ L+L+ ED EK I +
Sbjct: 3 VIPMVVEQTARGERSYDIYSRLLKERVIFLGGEVEDRMANLIVAQLLFLESEDPEKDINI 62
Query: 60 YLNSTGTT 67
Y+NS G +
Sbjct: 63 YINSPGGS 70
>gi|15603841|ref|NP_246915.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Pm70]
gi|378774981|ref|YP_005177224.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida 36950]
gi|383310944|ref|YP_005363754.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. HN06]
gi|386834993|ref|YP_006240310.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pasteurella
multocida subsp. multocida str. 3480]
gi|417854851|ref|ZP_12500118.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_goat]
gi|421255199|ref|ZP_15709765.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_buffalo]
gi|421262286|ref|ZP_15713573.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_cattle]
gi|421264724|ref|ZP_15715690.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. P52VAC]
gi|425064713|ref|ZP_18467838.1| ATP-dependentlp protease proteolytic subunit [Pasteurella
multocida subsp. gallicida X73]
gi|18202809|sp|Q9CJM2.1|CLPP_PASMU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|12722415|gb|AAK04060.1| ClpP [Pasteurella multocida subsp. multocida str. Pm70]
gi|338217272|gb|EGP03161.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_goat]
gi|356597529|gb|AET16255.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida 36950]
gi|380872216|gb|AFF24583.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. HN06]
gi|385201696|gb|AFI46551.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pasteurella
multocida subsp. multocida str. 3480]
gi|401687836|gb|EJS83533.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. P52VAC]
gi|401689639|gb|EJS85037.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_cattle]
gi|401690987|gb|EJS86083.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_buffalo]
gi|404380899|gb|EJZ77388.1| ATP-dependentlp protease proteolytic subunit [Pasteurella
multocida subsp. gallicida X73]
Length = 193
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP TA + D+ S L K R+++LG + LI+A+ L+L+ ED EK I +
Sbjct: 3 VIPMVVEQTARGERSYDIYSRLLKERVIFLGGEVEDRMANLIVAQLLFLESEDPEKDINI 62
Query: 60 YLNSTGTT 67
Y+NS G +
Sbjct: 63 YINSPGGS 70
>gi|389578265|ref|ZP_10168292.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfobacter postgatei 2ac9]
gi|389399900|gb|EIM62122.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfobacter postgatei 2ac9]
Length = 208
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG + V LI+A+ L+L+ ED +K I Y+NS G
Sbjct: 19 DIYSRLLKDRIIFLGSAIDDEVANLIVAQMLFLESEDPDKDINFYINSPG 68
>gi|85859380|ref|YP_461582.1| ATP-dependent Clp protease proteolytic subunit [Syntrophus
aciditrophicus SB]
gi|108935920|sp|Q2LTK5.1|CLPP_SYNAS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|85722471|gb|ABC77414.1| ATP-dependent Clp protease proteolytic subunit [Syntrophus
aciditrophicus SB]
Length = 194
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG V LI+A+ L+L+ ED +K I+ YLN+ G
Sbjct: 19 DIYSRLLKDRIIFLGTPIDDEVANLIIAQLLFLESEDPDKEIFFYLNTPG 68
>gi|257063882|ref|YP_003143554.1| protease subunit of ATP-dependent protease [Slackia
heliotrinireducens DSM 20476]
gi|256791535|gb|ACV22205.1| protease subunit of ATP-dependent protease [Slackia
heliotrinireducens DSM 20476]
Length = 206
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 11 EQPPP-----DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNS-T 64
EQ P D+ S L +RI++LG + +V L++A+ L+L+ D EK I LY+NS
Sbjct: 14 EQSPRGERTYDIYSRLLNDRIIFLGDAIDDNVANLVVAQLLHLESSDPEKDISLYINSPG 73
Query: 65 GTTEVGSFLCHALVFFQ 81
G+ G + A+ F +
Sbjct: 74 GSVSAGMAIYDAMQFIR 90
>gi|440509821|ref|YP_007347257.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Blochmannia chromaiodes str. 640]
gi|440454034|gb|AGC03526.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Blochmannia chromaiodes str. 640]
Length = 194
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI+++ + SV LI+A+ ++L+ E++EK I+LY+NS G
Sbjct: 19 DIFSLLLKERIIFMTGTIEDSVANLIVAQMMFLESENSEKDIHLYINSPG 68
>gi|253575671|ref|ZP_04853007.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
gi|251845009|gb|EES73021.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
Length = 196
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++L + V L++A+ L+L ED EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLSNAIDDEVANLVIAQLLFLAAEDPEKDIHLYINSPGGS 70
>gi|428778679|ref|YP_007170465.1| protease subunit of ATP-dependent protease [Dactylococcopsis
salina PCC 8305]
gi|428692958|gb|AFZ49108.1| protease subunit of ATP-dependent protease [Dactylococcopsis
salina PCC 8305]
Length = 200
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 21 LYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
LY+ RI++LG + I+A LYL ED KPIYLY+NS G +
Sbjct: 27 LYRERIIFLGRGINDGLANQIIAVMLYLDSEDPSKPIYLYINSPGGS 73
>gi|347730688|ref|ZP_08863801.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfovibrio sp. A2]
gi|347520543|gb|EGY27675.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfovibrio sp. A2]
Length = 201
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+ LG + LI A+ L+L+ E+ EK IYLY+NS G
Sbjct: 18 DIYSRLLKDRIILLGTPIDDQIASLICAQLLFLESENPEKEIYLYINSPG 67
>gi|226489629|emb|CAX74965.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Schistosoma japonicum]
Length = 253
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+ L S V L++A+ LYLQ ED + PI++Y+NS G
Sbjct: 64 DIYSRLLKDRIICLMGSISDEVAGLVVAQLLYLQSEDKKIPIHIYINSPG 113
>gi|443322206|ref|ZP_21051237.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gloeocapsa
sp. PCC 73106]
gi|442788092|gb|ELR97794.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gloeocapsa
sp. PCC 73106]
Length = 202
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + LI+A+ L+L+ ED EK I LY+NS G +
Sbjct: 17 DIYSRLLRERIIFLGEEVTDELANLIVAQLLFLEAEDPEKDINLYINSPGGS 68
>gi|428312433|ref|YP_007123410.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
gi|428254045|gb|AFZ20004.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
Length = 230
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG +V + I+A+ L+L ED EK I LY+NS G +
Sbjct: 43 DIYSRLLRERIIFLGTQVDDTVADSIIAQLLFLDAEDPEKDIQLYINSPGGS 94
>gi|403380350|ref|ZP_10922407.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus sp. JC66]
Length = 193
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG V ++A+ L+L +D EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGTPINDQVANAVIAQLLFLDAQDQEKDIHLYINSPGGS 70
>gi|359299708|ref|ZP_09185547.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
[parainfluenzae] CCUG 13788]
gi|402306845|ref|ZP_10825880.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus sputorum HK 2154]
gi|400373868|gb|EJP26793.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus sputorum HK 2154]
Length = 197
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++L + LI+A+ L+L+ ED EK IYLY+NS G
Sbjct: 19 DIYSRLLKERIIFLNGQVEDQMANLIVAQLLFLEAEDPEKDIYLYINSPG 68
>gi|328952152|ref|YP_004369486.1| ATP-dependent Clp protease proteolytic subunit [Desulfobacca
acetoxidans DSM 11109]
gi|328452476|gb|AEB08305.1| ATP-dependent Clp protease proteolytic subunit [Desulfobacca
acetoxidans DSM 11109]
Length = 199
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L ++RI++LG + V LI+A+ L+L+ ED +K I+ Y+NS G
Sbjct: 19 DIYSRLLRDRIIFLGSAINDEVSNLIVAQLLFLESEDPDKDIHFYINSPG 68
>gi|71892027|ref|YP_277757.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Blochmannia pennsylvanicus str. BPEN]
gi|110816455|sp|Q493F8.1|CLPP_BLOPB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71796133|gb|AAZ40884.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Blochmannia pennsylvanicus str. BPEN]
Length = 208
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI+++ + SV LI+A+ ++L+ E++EK I+LY+NS G
Sbjct: 33 DIFSLLLKERIIFMTGTIEDSVANLIVAQMMFLESENSEKDIHLYINSPG 82
>gi|383458987|ref|YP_005372976.1| ATP-dependent Clp protease proteolytic subunit [Corallococcus
coralloides DSM 2259]
gi|380732365|gb|AFE08367.1| ATP-dependent Clp protease proteolytic subunit [Corallococcus
coralloides DSM 2259]
Length = 199
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
DL S L K+RI+ LG V LI+A+ L+L+ ED +K I LY+NS G +
Sbjct: 18 DLYSRLLKDRIILLGTPINDDVANLIVAQLLFLESEDPDKGINLYINSPGGS 69
>gi|359424569|ref|ZP_09215682.1| ATP-dependent Clp protease proteolytic subunit [Gordonia amarae
NBRC 15530]
gi|358240169|dbj|GAB05264.1| ATP-dependent Clp protease proteolytic subunit [Gordonia amarae
NBRC 15530]
Length = 203
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFL-- 73
D+ S L +RIVYLG V ++A+ L+L ++ E PI LY+NS G + + +F
Sbjct: 21 DVYSRLLDDRIVYLGTEIDDGVANALIAQILHLDSDNPEAPIDLYINSPGGSVMATFALY 80
Query: 74 -----CHA 76
CHA
Sbjct: 81 DTMQYCHA 88
>gi|354586092|ref|ZP_09004765.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus lactis 154]
gi|353183068|gb|EHB48600.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus lactis 154]
Length = 198
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L K+RI++LG V I+A+ L+L ED EK I+LY+NS G GS
Sbjct: 19 DIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDIHLYINSPG----GSITAG 74
Query: 76 ALVF 79
+F
Sbjct: 75 MAIF 78
>gi|315644534|ref|ZP_07897666.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus vortex V453]
gi|315280041|gb|EFU43338.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus vortex V453]
Length = 198
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L K+RI++LG V I+A+ L+L ED EK I+LY+NS G GS
Sbjct: 19 DIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDIHLYINSPG----GSITAG 74
Query: 76 ALVF 79
+F
Sbjct: 75 MAIF 78
>gi|421858505|ref|ZP_16290772.1| Clp protease [Paenibacillus popilliae ATCC 14706]
gi|410831950|dbj|GAC41209.1| Clp protease [Paenibacillus popilliae ATCC 14706]
Length = 192
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG V I+A+ L+LQ +D +K I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGSQVNDMVANSIIAQMLFLQADDPDKDIHLYINSPGGS 70
>gi|336424669|ref|ZP_08604704.1| Clp protease [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336014202|gb|EGN44059.1| Clp protease [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 217
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L +RI++LG ELI+A+ L+L+ +D EK I LY+NS G + F
Sbjct: 38 DIMSRLLSDRIIFLGTQVDDVSAELIVAQLLFLESQDPEKDIQLYINSPGGSITAGF 94
>gi|297198068|ref|ZP_06915465.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Streptomyces sviceus ATCC 29083]
gi|197714242|gb|EDY58276.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Streptomyces sviceus ATCC 29083]
Length = 211
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 1 VIP-FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
V+P F T++ Q D S L + RIV+LG + ++A+F+YL+Y+D ++ I L
Sbjct: 9 VLPEFHERTSFGQKSMDPYSKLLEERIVFLGTQIDDTSANDLMAQFMYLEYQDPDRDIAL 68
Query: 60 YLNSTGTTEVGSFLCHALVF 79
Y+NS G GSF + ++
Sbjct: 69 YINSPG----GSFSAMSAIY 84
>gi|46447010|ref|YP_008375.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Protochlamydia amoebophila UWE25]
gi|67460480|sp|Q6MBE9.1|CLPP2_PARUW RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|46400651|emb|CAF24100.1| probable ATP-dependent Clp protease proteolytic subunit P
[Candidatus Protochlamydia amoebophila UWE25]
Length = 207
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
T + D+ S L K+RI+++G V +++A+ L+L+ ED +K +++Y+NS G
Sbjct: 21 TGRGERSMDIYSRLLKDRIIFIGTEITDQVANVVVAQLLFLKMEDPKKDVHIYINSLG 78
>gi|357633385|ref|ZP_09131263.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfovibrio sp. FW1012B]
gi|357581939|gb|EHJ47272.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfovibrio sp. FW1012B]
Length = 204
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L ++RI+ LG + V LI A+ L+L+ ED EK I++Y+NS G +
Sbjct: 19 DIYSRLLRDRIILLGSAVDDHVANLICAQLLFLESEDPEKEIFMYINSPGGS 70
>gi|261404070|ref|YP_003240311.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus sp. Y412MC10]
gi|329927993|ref|ZP_08281997.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
gi|261280533|gb|ACX62504.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus sp. Y412MC10]
gi|328938097|gb|EGG34494.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
Length = 198
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L K+RI++LG V I+A+ L+L ED EK I+LY+NS G GS
Sbjct: 19 DIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDIHLYINSPG----GSITAG 74
Query: 76 ALVF 79
+F
Sbjct: 75 MAIF 78
>gi|405365022|ref|ZP_11026468.1| ATP-dependent Clp protease proteolytic subunit [Chondromyces
apiculatus DSM 436]
gi|397089587|gb|EJJ20496.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 206
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV LG V +I+A+ L+L+ ED +K I LY+NS G +
Sbjct: 21 DIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPGGS 72
>gi|444911057|ref|ZP_21231233.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter
fuscus DSM 2262]
gi|444718395|gb|ELW59208.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter
fuscus DSM 2262]
Length = 201
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
DL S L K+RIV LG V +I+A+ L+L+ ED +K I LY+NS G +
Sbjct: 18 DLYSRLLKDRIVMLGTPVNDDVANIIVAQLLFLESEDPDKGISLYINSPGGS 69
>gi|386723275|ref|YP_006189601.1| ATP-dependent Clp protease proteolytic subunit 1 [Paenibacillus
mucilaginosus K02]
gi|384090400|gb|AFH61836.1| ATP-dependent Clp protease proteolytic subunit 1 [Paenibacillus
mucilaginosus K02]
Length = 200
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNS-TGTTEVG 70
D+ S L K+RI++LG + +V I+A+ L L ED +K I+LY+NS G+T G
Sbjct: 19 DIYSRLLKDRIIFLGSAIDDTVANSIIAQLLLLSAEDPDKDIHLYINSPGGSTTAG 74
>gi|303229413|ref|ZP_07316203.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-134-V-Col7a]
gi|303231336|ref|ZP_07318070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-049-V-Sch6]
gi|401680587|ref|ZP_10812502.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. ACP1]
gi|429760069|ref|ZP_19292559.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella atypica KON]
gi|302513932|gb|EFL55940.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-049-V-Sch6]
gi|302515949|gb|EFL57901.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-134-V-Col7a]
gi|400218495|gb|EJO49375.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. ACP1]
gi|429178474|gb|EKY19752.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella atypica KON]
Length = 197
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG +V ++A+ L+L+ ED +K I+LY+NS G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPG 67
>gi|148241165|ref|YP_001226322.1| protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
gi|147849475|emb|CAK26969.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
Length = 207
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG ++ + ++A+ LYL+ ED EK I +Y+NS G +
Sbjct: 34 DIYSRLLRERIIFLGTGIDDAIADAVVAQLLYLEAEDPEKEIQIYVNSPGGS 85
>gi|108762291|ref|YP_630243.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
xanthus DK 1622]
gi|338533213|ref|YP_004666547.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
gi|116270726|sp|Q1DAT0.1|CLPP1_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|108466171|gb|ABF91356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus
xanthus DK 1622]
gi|337259309|gb|AEI65469.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
Length = 206
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV LG V +I+A+ L+L+ ED +K I LY+NS G +
Sbjct: 21 DIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPGGS 72
>gi|17231175|ref|NP_487723.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|75909809|ref|YP_324105.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
gi|21759070|sp|Q8YQX8.1|CLPP2_ANASP RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|17132816|dbj|BAB75382.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|75703534|gb|ABA23210.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
Length = 232
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG +V I+A+ L+L ED+EK I LY+NS G +
Sbjct: 45 DIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGS 96
>gi|386392769|ref|ZP_10077550.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfovibrio sp. U5L]
gi|385733647|gb|EIG53845.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfovibrio sp. U5L]
Length = 204
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L ++RI+ LG + V LI A+ L+L+ ED EK I++Y+NS G +
Sbjct: 19 DIYSRLLRDRIILLGSAVDDHVANLICAQLLFLESEDPEKEIFMYINSPGGS 70
>gi|337746797|ref|YP_004640959.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
mucilaginosus KNP414]
gi|379720679|ref|YP_005312810.1| ATP-dependent Clp protease proteolytic subunit 1 [Paenibacillus
mucilaginosus 3016]
gi|336297986|gb|AEI41089.1| ATP-dependent Clp protease proteolytic subunit 1 [Paenibacillus
mucilaginosus KNP414]
gi|378569351|gb|AFC29661.1| ATP-dependent Clp protease proteolytic subunit 1 [Paenibacillus
mucilaginosus 3016]
Length = 200
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNS-TGTTEVG 70
D+ S L K+RI++LG + +V I+A+ L L ED +K I+LY+NS G+T G
Sbjct: 19 DIYSRLLKDRIIFLGSAIDDTVANSIIAQLLLLSAEDPDKDIHLYINSPGGSTTAG 74
>gi|255658239|ref|ZP_05403648.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mitsuokella
multacida DSM 20544]
gi|260849549|gb|EEX69556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mitsuokella
multacida DSM 20544]
Length = 199
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG +V ++A+ L+L+ ED +K I+LY+NS G
Sbjct: 14 DIYSRLLKDRIIFLGGPIDDAVANTVVAQLLFLESEDPDKDIHLYINSPG 63
>gi|428780533|ref|YP_007172319.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
gi|428694812|gb|AFZ50962.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
Length = 217
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
DL S L + RIV+LG + + I A+ L+L+ ED EK I LY+NS G +
Sbjct: 36 DLYSRLLRERIVFLGQQVDDQIADSIAAQMLFLEAEDPEKDIQLYINSPGGS 87
>gi|46579746|ref|YP_010554.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
vulgaris str. Hildenborough]
gi|120602778|ref|YP_967178.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
vulgaris DP4]
gi|387153092|ref|YP_005702028.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfovibrio vulgaris RCH1]
gi|60389677|sp|Q72CE8.1|CLPP_DESVH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201819|sp|A1VE85.1|CLPP_DESVV RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|46449161|gb|AAS95813.1| ATP-dependent Clp protease, proteolytic subunit [Desulfovibrio
vulgaris str. Hildenborough]
gi|120563007|gb|ABM28751.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfovibrio vulgaris DP4]
gi|311233536|gb|ADP86390.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfovibrio vulgaris RCH1]
Length = 201
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L K+RIV LG V LI A+ L+L+ E+ EK I++Y+NS G GS
Sbjct: 18 DIYSRLLKDRIVLLGTPIDDQVASLICAQLLFLESENPEKEIHMYINSPG----GSVTAG 73
Query: 76 ALVFFQISSINA 87
++ + IN+
Sbjct: 74 MAIYDTMQYINS 85
>gi|260892392|ref|YP_003238489.1| ATP-dependent Clp protease proteolytic subunit [Ammonifex
degensii KC4]
gi|260864533|gb|ACX51639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ammonifex
degensii KC4]
Length = 200
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+++G + L++A+ L+L+ ED EK I+LY+NS G
Sbjct: 21 DIYSRLLKDRIIFIGGPIDDHLANLVIAQLLFLEAEDPEKDIHLYINSPG 70
>gi|229828304|ref|ZP_04454373.1| hypothetical protein GCWU000342_00362 [Shuttleworthia satelles
DSM 14600]
gi|229792898|gb|EEP29012.1| hypothetical protein GCWU000342_00362 [Shuttleworthia satelles
DSM 14600]
Length = 190
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG + LI+A+ L+L+ ED K I+LY+NS G
Sbjct: 16 DIYSRLLKDRIIFLGEDVNETTASLIVAQLLFLESEDPNKDIHLYINSPG 65
>gi|374604920|ref|ZP_09677867.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
dendritiformis C454]
gi|374389443|gb|EHQ60818.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
dendritiformis C454]
Length = 192
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG V I+A+ L+LQ +D +K I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGSQVNDVVANSIIAQMLFLQADDPDKDIHLYINSPGGS 70
>gi|148657762|ref|YP_001277967.1| endopeptidase Clp [Roseiflexus sp. RS-1]
gi|148569872|gb|ABQ92017.1| Endopeptidase Clp [Roseiflexus sp. RS-1]
Length = 219
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K R++ LG + LI+A+ L+L++ED ++ I+LY+NS G +
Sbjct: 36 DIYSRLLKERVILLGTPIDDQIANLIVAQLLFLEHEDPDRDIWLYINSPGGS 87
>gi|427405940|ref|ZP_18896145.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
F0473]
gi|425708781|gb|EKU71820.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
F0473]
Length = 206
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++LG +V +++A+ L+L+ ED +K I+LY+NS G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDNVANVVIAQMLFLESEDPDKDIHLYINSPG 69
>gi|399888212|ref|ZP_10774089.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
arbusti SL206]
Length = 194
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG + LI+A+ L+L+ ED +K I LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGEDVNDTTASLIVAQLLFLESEDPDKDISLYINSPGGS 70
>gi|337750712|ref|YP_004644874.1| protein ClpP [Paenibacillus mucilaginosus KNP414]
gi|379723759|ref|YP_005315890.1| protein ClpP [Paenibacillus mucilaginosus 3016]
gi|386726512|ref|YP_006192838.1| protein ClpP [Paenibacillus mucilaginosus K02]
gi|336301901|gb|AEI45004.1| ClpP [Paenibacillus mucilaginosus KNP414]
gi|378572431|gb|AFC32741.1| ClpP [Paenibacillus mucilaginosus 3016]
gi|384093637|gb|AFH65073.1| protein ClpP [Paenibacillus mucilaginosus K02]
Length = 196
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG + V L++A+ L+L D +K I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGSAIDDDVANLVIAQLLFLAATDPDKDIHLYINSPGGS 70
>gi|313892932|ref|ZP_07826509.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. oral taxon 158 str. F0412]
gi|313442285|gb|EFR60700.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. oral taxon 158 str. F0412]
Length = 197
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG +V ++A+ L+L+ ED +K I+LY+NS G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPG 67
>gi|269798318|ref|YP_003312218.1| ATP-dependent Clp protease proteolytic subunit ClpP [Veillonella
parvula DSM 2008]
gi|269094947|gb|ACZ24938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula DSM 2008]
Length = 197
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG +V ++A+ L+L+ ED +K I+LY+NS G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPG 67
>gi|197123826|ref|YP_002135777.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Anaeromyxobacter sp. K]
gi|226706439|sp|B4UAX9.1|CLPP_ANASK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|196173675|gb|ACG74648.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. K]
Length = 203
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG V +I+A+ L+L+ ED +K I LY+NS G +
Sbjct: 21 DIYSRLLKDRIIFLGTPVDDDVANVIIAQLLFLESEDPDKDINLYINSPGGS 72
>gi|157370220|ref|YP_001478209.1| ATP-dependent Clp protease proteolytic subunit [Serratia
proteamaculans 568]
gi|157321984|gb|ABV41081.1| Endopeptidase Clp [Serratia proteamaculans 568]
Length = 197
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L ++RIV+L + E++ A+ L+L+ E+ EKPI+LY+NS G F
Sbjct: 23 DIYSRLLRDRIVFLNGEVNDQIAEVLCAQLLFLEAENPEKPIHLYINSPGGVITSGF 79
>gi|156741459|ref|YP_001431588.1| endopeptidase Clp [Roseiflexus castenholzii DSM 13941]
gi|156232787|gb|ABU57570.1| Endopeptidase Clp [Roseiflexus castenholzii DSM 13941]
Length = 219
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K R++ LG + LI+A+ L+L++ED ++ I+LY+NS G +
Sbjct: 36 DIYSRLLKERVILLGTPIEDQIANLIVAQLLFLEHEDPDRDIWLYINSPGGS 87
>gi|325291111|ref|YP_004267292.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophobotulus glycolicus DSM 8271]
gi|324966512|gb|ADY57291.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophobotulus glycolicus DSM 8271]
Length = 202
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG + LI+A+ L+L ED EK I+LY+NS G +
Sbjct: 20 DIYSRLLKDRIIFLGGQVDDYMANLIVAQLLFLDAEDPEKDIFLYINSPGGS 71
>gi|282850557|ref|ZP_06259936.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula ATCC 17745]
gi|294792182|ref|ZP_06757330.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 6_1_27]
gi|294794047|ref|ZP_06759184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 3_1_44]
gi|417001079|ref|ZP_11940993.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella parvula ACS-068-V-Sch12]
gi|282580050|gb|EFB85454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula ATCC 17745]
gi|294455617|gb|EFG23989.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 3_1_44]
gi|294457412|gb|EFG25774.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 6_1_27]
gi|333975562|gb|EGL76441.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella parvula ACS-068-V-Sch12]
Length = 197
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG +V ++A+ L+L+ ED +K I+LY+NS G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPG 67
>gi|86159772|ref|YP_466557.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Anaeromyxobacter dehalogenans 2CP-C]
gi|220918591|ref|YP_002493895.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter dehalogenans 2CP-1]
gi|115311353|sp|Q2IEW1.1|CLPP_ANADE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763782|sp|B8J5G7.1|CLPP_ANAD2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|85776283|gb|ABC83120.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Anaeromyxobacter dehalogenans 2CP-C]
gi|219956445|gb|ACL66829.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter dehalogenans 2CP-1]
Length = 203
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG V +I+A+ L+L+ ED +K I LY+NS G +
Sbjct: 21 DIYSRLLKDRIIFLGTPVDDDVANVIIAQLLFLESEDPDKDINLYINSPGGS 72
>gi|428320528|ref|YP_007118410.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
gi|428244208|gb|AFZ09994.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
Length = 229
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG V + I+A+ LYL ED EK + +Y+NS G +
Sbjct: 42 DIYSRLLRERIVFLGTPVTDEVADSIVAQLLYLDAEDPEKDVQMYINSPGGS 93
>gi|427724371|ref|YP_007071648.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
gi|427356091|gb|AFY38814.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
Length = 200
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 21 LYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
LY+ RI++LG ++ I+A LYL ED KPIYLY+NS G +
Sbjct: 27 LYRERIIFLGRGVNDALANQIIAIMLYLDSEDPSKPIYLYINSPGGS 73
>gi|238018907|ref|ZP_04599333.1| hypothetical protein VEIDISOL_00767 [Veillonella dispar ATCC
17748]
gi|237864391|gb|EEP65681.1| hypothetical protein VEIDISOL_00767 [Veillonella dispar ATCC
17748]
Length = 197
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG +V ++A+ L+L+ ED +K I+LY+NS G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPG 67
>gi|115311350|sp|Q3M726.2|CLPP3_ANAVT RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
Length = 214
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG +V I+A+ L+L ED+EK I LY+NS G +
Sbjct: 27 DIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGS 78
>gi|298243590|ref|ZP_06967397.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Ktedonobacter racemifer DSM 44963]
gi|297556644|gb|EFH90508.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Ktedonobacter racemifer DSM 44963]
Length = 218
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
DL S L K RI+++G V ++A+ LYLQ EDA K I +Y+NS G
Sbjct: 41 DLYSRLLKERIIFVGTPIDDQVANSVVAQLLYLQSEDATKDIQMYINSPG 90
>gi|288818082|ref|YP_003432430.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenobacter
thermophilus TK-6]
gi|384128847|ref|YP_005511460.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobacter thermophilus TK-6]
gi|288787482|dbj|BAI69229.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenobacter
thermophilus TK-6]
gi|308751684|gb|ADO45167.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobacter thermophilus TK-6]
Length = 199
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L ++RIV LG V LI+A+ L+L+ +D EK IY+Y+NS G +
Sbjct: 24 DIYSRLLQDRIVLLGYPIDDHVANLIVAQLLFLEAQDPEKDIYMYINSPGGS 75
>gi|253681101|ref|ZP_04861904.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum D str. 1873]
gi|331270305|ref|YP_004396797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum BKT015925]
gi|416350488|ref|ZP_11680890.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum C str. Stockholm]
gi|253562950|gb|EES92396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum D str. 1873]
gi|329126855|gb|AEB76800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum BKT015925]
gi|338196268|gb|EGO88472.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum C str. Stockholm]
Length = 195
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG L++A+ L+L+ ED +K IYLY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGEEVNDVSASLVVAQLLFLEAEDPDKDIYLYINSPGGS 70
>gi|168186116|ref|ZP_02620751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum C str. Eklund]
gi|169296133|gb|EDS78266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum C str. Eklund]
Length = 195
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG L++A+ L+L+ ED +K IYLY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGEEVNDVSASLVVAQLLFLEAEDPDKDIYLYINSPGGS 70
>gi|427730195|ref|YP_007076432.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
gi|427366114|gb|AFY48835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
Length = 232
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG +V I+A+ L+L ED+EK I LY+NS G +
Sbjct: 45 DIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGS 96
>gi|170077811|ref|YP_001734449.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
PCC 7002]
gi|169885480|gb|ACA99193.1| Clp protease [Synechococcus sp. PCC 7002]
Length = 199
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 21 LYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
LY+ RI++LG ++ I+A LYL ED KPIYLY+NS G +
Sbjct: 27 LYRERIIFLGRGVNDALANQIIAIMLYLDSEDPSKPIYLYINSPGGS 73
>gi|428313411|ref|YP_007124388.1| protease subunit of ATP-dependent protease [Microcoleus sp. PCC
7113]
gi|428255023|gb|AFZ20982.1| protease subunit of ATP-dependent protease [Microcoleus sp. PCC
7113]
Length = 198
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 2 IPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYL 61
+P + T W D+ + LY+ RI++LG + I+A LYL ED K IYLY+
Sbjct: 12 LPGSQYTEW----VDIYNRLYRERIIFLGQEVDDEIANQIIAVMLYLDSEDNSKDIYLYI 67
Query: 62 NSTG 65
NS G
Sbjct: 68 NSPG 71
>gi|33151467|ref|NP_872820.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
ducreyi 35000HP]
gi|60389738|sp|Q7VP78.1|CLPP_HAEDU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|33147687|gb|AAP95209.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
ducreyi 35000HP]
Length = 197
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP T+ + D+ S L K RI++L + LI+A+ L+L+ ED EK IYL
Sbjct: 3 VIPMVVEQTSKGERSYDIYSRLLKERIIFLNGEVEDHMANLIVAQLLFLEAEDPEKDIYL 62
Query: 60 YLNSTG 65
Y+NS G
Sbjct: 63 YINSPG 68
>gi|328955401|ref|YP_004372734.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Coriobacterium glomerans PW2]
gi|328455725|gb|AEB06919.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Coriobacterium glomerans PW2]
Length = 207
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 11 EQPPP-----DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
EQ P D+ S L +RIV+LG L++A+ L+L+ +DAEK I LY+NS G
Sbjct: 15 EQTPRGERSYDIYSRLLNDRIVFLGEEINSVTANLVIAQLLHLESQDAEKDISLYINSPG 74
>gi|299821953|ref|ZP_07053841.1| ATP-dependent Clp protease proteolytic subunit [Listeria grayi
DSM 20601]
gi|299817618|gb|EFI84854.1| ATP-dependent Clp protease proteolytic subunit [Listeria grayi
DSM 20601]
Length = 203
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+A+ L+L +D +K IYLY+NS G +
Sbjct: 25 DIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLDSQDPDKDIYLYINSPGGS 76
>gi|194476565|ref|YP_002048744.1| ATP-dependent Clp protease proteolytic subunit [Paulinella
chromatophora]
gi|171191572|gb|ACB42534.1| ATP-dependent Clp protease proteolytic subunit [Paulinella
chromatophora]
Length = 219
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 13/72 (18%)
Query: 12 QPPPDLASYLYKNRIVYLGMSFVP------------SVRELILAEFLYLQYEDAEKPIYL 59
+ DLAS L RI+YLGM+ +V +L++A+ L L++E + I +
Sbjct: 21 ESMSDLASILLSERIIYLGMALASDDETRQSFSLGMNVTQLMIAQLLCLEFE-SNSAITI 79
Query: 60 YLNSTGTTEVGS 71
Y+NSTG+T++ S
Sbjct: 80 YINSTGSTDINS 91
>gi|428305261|ref|YP_007142086.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
gi|428246796|gb|AFZ12576.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
Length = 198
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ + LY+ RI++LG + I+A LYL ED K IYLY+NS G GS
Sbjct: 22 DIYNRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPG----GSVTAG 77
Query: 76 ALVFFQISSINAS 88
+F + I +
Sbjct: 78 MAIFDTMQHIKSD 90
>gi|87302966|ref|ZP_01085770.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
gi|87282462|gb|EAQ74421.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
Length = 224
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 23 KNRIVYLGMSFVPS----------VRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
K RIVYLG+ V +LI+A+ L+L++++ EKPI+ Y+NSTGT+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTQLIIAQLLFLEFDNPEKPIFFYINSTGTS 81
>gi|334118528|ref|ZP_08492617.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
gi|333459535|gb|EGK88148.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
Length = 229
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG V + I+A+ LYL ED EK + +Y+NS G +
Sbjct: 42 DIYSRLLRERIVFLGTPVTDEVADSIVAQLLYLDAEDPEKDVQMYINSPGGS 93
>gi|322515314|ref|ZP_08068311.1| ATP-dependent Clp protease, protease subunit [Actinobacillus
ureae ATCC 25976]
gi|322118690|gb|EFX90902.1| ATP-dependent Clp protease, protease subunit [Actinobacillus
ureae ATCC 25976]
Length = 217
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP T+ + D+ S L K RI++L + LI+A+ L+L+ ED EK IYL
Sbjct: 24 VIPMVVEQTSKGERSYDIYSRLLKERIIFLNGEVEDHMANLIVAQLLFLESEDPEKDIYL 83
Query: 60 YLNSTG 65
Y+NS G
Sbjct: 84 YINSPG 89
>gi|320530213|ref|ZP_08031283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
artemidis F0399]
gi|320137646|gb|EFW29558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
artemidis F0399]
Length = 199
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++LG +V +++A+ L+L+ ED +K I+LY+NS G
Sbjct: 14 DIYSRLLKERIIFLGGPIDDNVANVVVAQMLFLESEDPDKDIHLYINSPG 63
>gi|260887080|ref|ZP_05898343.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|330839143|ref|YP_004413723.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|402833991|ref|ZP_10882598.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. CM52]
gi|260863142|gb|EEX77642.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|329746907|gb|AEC00264.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|402279060|gb|EJU28103.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. CM52]
Length = 206
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RIV++G +V +++A+ L+L+ ED +K I+LY+NS G
Sbjct: 24 DIYSRLLKDRIVFVGGPIDDNVANVVVAQLLFLESEDPDKDIHLYINSPG 73
>gi|220903965|ref|YP_002479277.1| endopeptidase Clp [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|259585948|sp|B8IYM2.1|CLPP_DESDA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|219868264|gb|ACL48599.1| Endopeptidase Clp [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 202
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV LG +V LI A+ L+L+ +D EK I LY+NS G +
Sbjct: 19 DIYSRLLKDRIVLLGSEVNDTVASLICAQLLFLESQDPEKEISLYINSPGGS 70
>gi|115374393|ref|ZP_01461676.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|310824399|ref|YP_003956757.1| ATP-dependent CLP protease proteolytic subunit 2 [Stigmatella
aurantiaca DW4/3-1]
gi|115368595|gb|EAU67547.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|309397471|gb|ADO74930.1| ATP-dependent Clp protease proteolytic subunit 2 [Stigmatella
aurantiaca DW4/3-1]
Length = 200
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 2 IPFTSGTAWEQPPP-DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
IPF T+ DL S L K+RI+ LG+ V +++A+ L+L+ ED EK I +Y
Sbjct: 3 IPFVIETSHRGERAYDLYSRLLKDRIIMLGVPINDEVANVVVAQMLFLESEDPEKGINIY 62
Query: 61 LNSTGTT 67
+NS G +
Sbjct: 63 INSPGGS 69
>gi|33240837|ref|NP_875779.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|67460521|sp|Q7VAR9.1|CLPP2_PROMA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|33238366|gb|AAQ00432.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 200
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ + L RI++LG V ++A+ LYL ED+ KPIYLY+NS G +
Sbjct: 22 DIYTRLGAERILFLGQEVTDGVANSLVAQMLYLDSEDSTKPIYLYINSPGGS 73
>gi|359686358|ref|ZP_09256359.1| ATP-dependent Clp protease proteolytic subunit [Leptospira
santarosai str. 2000030832]
gi|410450331|ref|ZP_11304372.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira sp. Fiocruz LV3954]
gi|418744132|ref|ZP_13300488.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira santarosai str. CBC379]
gi|418751925|ref|ZP_13308197.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira santarosai str. MOR084]
gi|421114342|ref|ZP_15574764.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira santarosai str. JET]
gi|422004168|ref|ZP_16351390.1| ATP-dependent Clp protease proteolytic subunit [Leptospira
santarosai serovar Shermani str. LT 821]
gi|409967654|gb|EKO35479.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira santarosai str. MOR084]
gi|410015844|gb|EKO77935.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira sp. Fiocruz LV3954]
gi|410794583|gb|EKR92483.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira santarosai str. CBC379]
gi|410800301|gb|EKS06497.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira santarosai str. JET]
gi|417257146|gb|EKT86552.1| ATP-dependent Clp protease proteolytic subunit [Leptospira
santarosai serovar Shermani str. LT 821]
gi|456874658|gb|EMF89930.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira santarosai str. ST188]
Length = 197
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T+ + D+ S L K+RI++LG + +I A+ L+L+ E+ E+ IYL
Sbjct: 3 VIPYVIEQTSRGERSYDIFSRLLKDRIIFLGNAINDDYANVITAQLLFLEAENPERDIYL 62
Query: 60 YLNSTG 65
YLNS G
Sbjct: 63 YLNSPG 68
>gi|434391262|ref|YP_007126209.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa
sp. PCC 7428]
gi|428263103|gb|AFZ29049.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa
sp. PCC 7428]
Length = 230
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG +V + I+A+ L+L ED EK I LY+NS G +
Sbjct: 43 DIYSRLLRERIIFLGTQVDDTVADSIVAQLLFLDAEDPEKDIQLYINSPGGS 94
>gi|410940642|ref|ZP_11372445.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira noguchii str. 2006001870]
gi|410784269|gb|EKR73257.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira noguchii str. 2006001870]
Length = 198
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T+ + D+ S L K+RI++LG + +I A+ L+L+ E+ E+ IYL
Sbjct: 3 VIPYVIEQTSRGERSYDIFSRLLKDRIIFLGNAINDDYANVITAQLLFLEAENPERDIYL 62
Query: 60 YLNSTG 65
YLNS G
Sbjct: 63 YLNSPG 68
>gi|226310010|ref|YP_002769904.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
gi|226092958|dbj|BAH41400.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
Length = 193
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
T++ + D+ S L K+RI++LG + V ++A+ L+L ED +K I+LY+NS G +
Sbjct: 11 TSYGERSYDIYSRLLKDRIIFLGSAIDDQVANAVVAQLLFLAAEDPKKDIHLYINSPGGS 70
>gi|83815964|ref|YP_446772.1| ATP-dependent Clp protease proteolytic subunit [Salinibacter ruber
DSM 13855]
gi|83757358|gb|ABC45471.1| ATP-dependent Clp protease proteolytic subunit [Salinibacter ruber
DSM 13855]
Length = 272
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RIV++G + L +A+ LYL E +EKPI LY+NS G
Sbjct: 76 DIFSRLLKERIVFIGTPINDQIANLTVAQLLYLASESSEKPINLYINSPG 125
>gi|294508705|ref|YP_003572764.1| ATP-dependent Clp protease proteolytic subunit [Salinibacter ruber
M8]
gi|294345034|emb|CBH25812.1| ATP-dependent Clp protease proteolytic subunit [Salinibacter ruber
M8]
Length = 273
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RIV++G + L +A+ LYL E +EKPI LY+NS G
Sbjct: 77 DIFSRLLKERIVFIGTPINDQIANLTVAQLLYLASESSEKPINLYINSPG 126
>gi|418719087|ref|ZP_13278287.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira borgpetersenii str. UI 09149]
gi|418739074|ref|ZP_13295467.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira borgpetersenii serovar Castellonis str.
200801910]
gi|421092921|ref|ZP_15553649.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira borgpetersenii str. 200801926]
gi|410364297|gb|EKP15322.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira borgpetersenii str. 200801926]
gi|410744240|gb|EKQ92981.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira borgpetersenii str. UI 09149]
gi|410745772|gb|EKQ98682.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira borgpetersenii serovar Castellonis str.
200801910]
gi|456890209|gb|EMG01059.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira borgpetersenii str. 200701203]
Length = 197
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T+ + D+ S L K+RI++LG + +I A+ L+L+ E+ E+ IYL
Sbjct: 3 VIPYVIEQTSRGERSYDIFSRLLKDRIIFLGNAINDDYANVITAQLLFLEAENPERDIYL 62
Query: 60 YLNSTG 65
YLNS G
Sbjct: 63 YLNSPG 68
>gi|398817357|ref|ZP_10575983.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Brevibacillus sp. BC25]
gi|398030411|gb|EJL23825.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Brevibacillus sp. BC25]
Length = 193
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
T++ + D+ S L K+RI++LG + V ++A+ L+L ED +K I+LY+NS G +
Sbjct: 11 TSYGERSYDIYSRLLKDRIIFLGSAIDDQVANAVVAQLLFLAAEDPKKDIHLYINSPGGS 70
>gi|307722032|ref|YP_003893172.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sulfurimonas
autotrophica DSM 16294]
gi|306980125|gb|ADN10160.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sulfurimonas
autotrophica DSM 16294]
Length = 196
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RIV L +V I+A+FL+L+ ED EK IY Y+NS G
Sbjct: 19 DIYSRLLKDRIVMLSGEVNDAVASTIVAQFLFLEAEDPEKDIYFYINSPG 68
>gi|289548353|ref|YP_003473341.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermocrinis
albus DSM 14484]
gi|289181970|gb|ADC89214.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermocrinis albus DSM 14484]
Length = 199
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L ++RIV LG V LI+A+ L+L+ +D EK IY+Y+NS G +
Sbjct: 24 DIYSRLLQDRIVLLGYPIDDHVANLIVAQLLFLEAQDPEKDIYMYINSPGGS 75
>gi|251798425|ref|YP_003013156.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Paenibacillus sp. JDR-2]
gi|247546051|gb|ACT03070.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus sp. JDR-2]
Length = 195
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG + V ++A+ L+L +D EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGSAIDDDVANSVIAQLLFLAADDPEKDIHLYINSPGGS 70
>gi|24215259|ref|NP_712740.1| ATP-dependent protease ClpP [Leptospira interrogans serovar Lai
str. 56601]
gi|45657293|ref|YP_001379.1| ATP-dependent Clp protease proteolytic subunit [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|386074553|ref|YP_005988870.1| ATP-dependent protease ClpP [Leptospira interrogans serovar Lai
str. IPAV]
gi|398338867|ref|ZP_10523570.1| ATP-dependent Clp protease proteolytic subunit [Leptospira
kirschneri serovar Bim str. 1051]
gi|417762627|ref|ZP_12410616.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans str. 2002000624]
gi|417766676|ref|ZP_12414626.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Bulgarica str. Mallika]
gi|417775073|ref|ZP_12422933.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans str. 2002000621]
gi|417783599|ref|ZP_12431317.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans str. C10069]
gi|418670221|ref|ZP_13231593.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|418671498|ref|ZP_13232849.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans str. 2002000623]
gi|418676998|ref|ZP_13238276.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira kirschneri serovar Grippotyphosa str. RM52]
gi|418687903|ref|ZP_13249060.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira kirschneri serovar Grippotyphosa str.
Moskva]
gi|418692212|ref|ZP_13253291.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans str. FPW2026]
gi|418695041|ref|ZP_13256067.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira kirschneri str. H1]
gi|418700043|ref|ZP_13260988.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Bataviae str. L1111]
gi|418708768|ref|ZP_13269568.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Grippotyphosa str. UI
08368]
gi|418724840|ref|ZP_13283624.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans str. UI 12621]
gi|418728362|ref|ZP_13286935.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans str. UI 12758]
gi|418742726|ref|ZP_13299096.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira kirschneri serovar Valbuzzi str. 200702274]
gi|421083918|ref|ZP_15544787.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira santarosai str. HAI1594]
gi|421091713|ref|ZP_15552478.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira kirschneri str. 200802841]
gi|421102156|ref|ZP_15562764.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Icterohaemorrhagiae
str. Verdun LP]
gi|421108349|ref|ZP_15568889.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira kirschneri str. H2]
gi|421119272|ref|ZP_15579596.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans str. Brem 329]
gi|421125409|ref|ZP_15585661.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Grippotyphosa str.
2006006986]
gi|421130860|ref|ZP_15591052.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira kirschneri str. 2008720114]
gi|421133219|ref|ZP_15593369.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Grippotyphosa str.
Andaman]
gi|67460406|sp|Q8F352.1|CLPP_LEPIN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460498|sp|Q72SG6.1|CLPP1_LEPIC RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|24196349|gb|AAN49758.1| ATP-dependent protease ClpP [Leptospira interrogans serovar Lai
str. 56601]
gi|45600531|gb|AAS70016.1| ATP-dependent Clp protease, proteolytic subunit [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|353458342|gb|AER02887.1| ATP-dependent protease ClpP [Leptospira interrogans serovar Lai
str. IPAV]
gi|400322898|gb|EJO70754.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira kirschneri serovar Grippotyphosa str. RM52]
gi|400350814|gb|EJP03066.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Bulgarica str. Mallika]
gi|400358002|gb|EJP14121.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans str. FPW2026]
gi|409941620|gb|EKN87248.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans str. 2002000624]
gi|409953223|gb|EKO07724.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans str. C10069]
gi|409957200|gb|EKO16115.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira kirschneri str. H1]
gi|409961737|gb|EKO25480.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans str. UI 12621]
gi|409999458|gb|EKO50149.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira kirschneri str. 200802841]
gi|410006615|gb|EKO60366.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira kirschneri str. H2]
gi|410022645|gb|EKO89420.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Grippotyphosa str.
Andaman]
gi|410347902|gb|EKO98753.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans str. Brem 329]
gi|410357963|gb|EKP05168.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira kirschneri str. 2008720114]
gi|410367984|gb|EKP23364.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Icterohaemorrhagiae
str. Verdun LP]
gi|410433574|gb|EKP77916.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira santarosai str. HAI1594]
gi|410436987|gb|EKP86091.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Grippotyphosa str.
2006006986]
gi|410575170|gb|EKQ38192.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans str. 2002000621]
gi|410581457|gb|EKQ49267.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans str. 2002000623]
gi|410737327|gb|EKQ82068.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira kirschneri serovar Grippotyphosa str.
Moskva]
gi|410750101|gb|EKR07084.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira kirschneri serovar Valbuzzi str. 200702274]
gi|410753992|gb|EKR15649.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410760915|gb|EKR27108.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Bataviae str. L1111]
gi|410770698|gb|EKR45911.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Grippotyphosa str. UI
08368]
gi|410776879|gb|EKR56854.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans str. UI 12758]
gi|455789238|gb|EMF41167.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Lora str. TE 1992]
gi|456825244|gb|EMF73640.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Canicola str. LT1962]
gi|456969070|gb|EMG10157.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Grippotyphosa str.
LT2186]
gi|456986967|gb|EMG22404.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Copenhageni str.
LT2050]
Length = 198
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T+ + D+ S L K+RI++LG + +I A+ L+L+ E+ E+ IYL
Sbjct: 3 VIPYVIEQTSRGERSYDIFSRLLKDRIIFLGNAINDDYANVITAQLLFLEAENPERDIYL 62
Query: 60 YLNSTG 65
YLNS G
Sbjct: 63 YLNSPG 68
>gi|417770693|ref|ZP_12418598.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Pomona str. Pomona]
gi|418682174|ref|ZP_13243394.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Pomona str. Kennewicki
LC82-25]
gi|418704491|ref|ZP_13265364.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Hebdomadis str. R499]
gi|418711992|ref|ZP_13272739.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans str. UI 08452]
gi|421116666|ref|ZP_15577046.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Canicola str. Fiocruz
LV133]
gi|400326184|gb|EJO78453.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Pomona str. Kennewicki
LC82-25]
gi|409947349|gb|EKN97348.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Pomona str. Pomona]
gi|410011833|gb|EKO69944.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Canicola str. Fiocruz
LV133]
gi|410765887|gb|EKR36581.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Hebdomadis str. R499]
gi|410791499|gb|EKR85173.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans str. UI 08452]
gi|455668745|gb|EMF33935.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira interrogans serovar Pomona str. Fox 32256]
Length = 198
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T+ + D+ S L K+RI++LG + +I A+ L+L+ E+ E+ IYL
Sbjct: 3 VIPYVIEQTSRGERSYDIFSRLLKDRIIFLGNAINDDYANVITAQLLFLEAENPERDIYL 62
Query: 60 YLNSTG 65
YLNS G
Sbjct: 63 YLNSPG 68
>gi|430743442|ref|YP_007202571.1| protease subunit of ATP-dependent protease [Singulisphaera
acidiphila DSM 18658]
gi|430015162|gb|AGA26876.1| protease subunit of ATP-dependent protease [Singulisphaera
acidiphila DSM 18658]
Length = 204
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
+ E+ D+ S L ++RI+ LG + +V LI+A+ L L ++DA+ I+LY+NS G +
Sbjct: 11 SGREERAMDIYSRLLQDRIIILGSAIDDNVSNLIVAQMLVLAHQDAKADIHLYINSPGGS 70
>gi|163781838|ref|ZP_02176838.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga
sp. 128-5-R1-1]
gi|159883058|gb|EDP76562.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga
sp. 128-5-R1-1]
Length = 201
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L ++RIV LG V LI+A+ L+L+ +D +K IYLY+NS G +
Sbjct: 26 DIYSRLLQDRIVLLGFPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPGGS 77
>gi|15606541|ref|NP_213921.1| ATP-dependent Clp protease proteolytic subunit [Aquifex aeolicus
VF5]
gi|6225158|sp|O67357.1|CLPP_AQUAE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|2983755|gb|AAC07315.1| ATP-dependent Clp protease proteolytic subunit [Aquifex aeolicus
VF5]
Length = 201
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L ++RIV LG V LI+A+ L+L+ +D +K IYLY+NS G +
Sbjct: 26 DIYSRLLQDRIVLLGSPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPGGS 77
>gi|407691666|ref|YP_006816455.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
suis H91-0380]
gi|407387723|gb|AFU18216.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
suis H91-0380]
Length = 196
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP T+ + D+ S L K RI++L + LI+A+ L+L+ ED EK IYL
Sbjct: 3 VIPMVVEQTSKGERSYDIYSRLLKERIIFLNGEVEDHMANLIVAQLLFLESEDPEKDIYL 62
Query: 60 YLNSTG 65
Y+NS G
Sbjct: 63 YINSPG 68
>gi|384915524|ref|ZP_10015740.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) (Caseinolytic protease) (Protease Ti) (Heat shock
protein F21.5) [Methylacidiphilum fumariolicum SolV]
gi|384527074|emb|CCG91611.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) (Caseinolytic protease) (Protease Ti) (Heat shock
protein F21.5) [Methylacidiphilum fumariolicum SolV]
Length = 216
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RIV++G ++ L++A+ L+LQ ED +K I LY++S G
Sbjct: 25 DIFSRLLKDRIVFIGTPIDDNIANLVIAQLLFLQMEDPKKDISLYIHSPG 74
>gi|219129357|ref|XP_002184857.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403642|gb|EEC43593.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 188
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG V +++A+ LYL ED EK I LY+NS G +
Sbjct: 2 DVISRLLKDRILLLGQGVDDEVANVLVAQLLYLANEDPEKDITLYINSPGGS 53
>gi|116327862|ref|YP_797582.1| ATP-dependent Clp protease proteolytic subunit [Leptospira
borgpetersenii serovar Hardjo-bovis str. L550]
gi|116330746|ref|YP_800464.1| ATP-dependent Clp protease proteolytic subunit [Leptospira
borgpetersenii serovar Hardjo-bovis str. JB197]
gi|116120606|gb|ABJ78649.1| Protease subunit of endopeptidase Clp [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116124435|gb|ABJ75706.1| Protease subunit of endopeptidase Clp [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
Length = 195
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T+ + D+ S L K+RI++LG + +I A+ L+L+ E+ E+ IYL
Sbjct: 3 VIPYVIEQTSRGERSYDIFSRLLKDRIIFLGNAINDDYANVITAQLLFLEAENPERDIYL 62
Query: 60 YLNSTG 65
YLNS G
Sbjct: 63 YLNSPG 68
>gi|116074798|ref|ZP_01472059.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
gi|116068020|gb|EAU73773.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
Length = 196
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG I+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGEPVTSESANRIVAQLLFLEAEDPEKDIYLYINSPGGS 68
>gi|392375227|ref|YP_003207060.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Methylomirabilis oxyfera]
gi|258592920|emb|CBE69229.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Candidatus Methylomirabilis oxyfera]
Length = 205
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+++G + LI+A+ L+L+ ED +K I+LY+NS G + S
Sbjct: 19 DIFSRLLKDRILFIGTPIDDAESNLIIAQLLFLEAEDPDKDIHLYVNSPGGSVTASL 75
>gi|225175200|ref|ZP_03729196.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dethiobacter alkaliphilus AHT 1]
gi|225169376|gb|EEG78174.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dethiobacter alkaliphilus AHT 1]
Length = 193
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+++G +V L++A+ L+L+ ED EK I +Y+NS G +
Sbjct: 19 DIYSRLLKDRIIFIGSPIDDNVANLVIAQLLFLESEDPEKDINIYVNSPGGS 70
>gi|425066829|ref|ZP_18469949.1| ATP-dependentlp protease proteolytic subunit [Pasteurella
multocida subsp. gallicida P1059]
gi|404380615|gb|EJZ77105.1| ATP-dependentlp protease proteolytic subunit [Pasteurella
multocida subsp. gallicida P1059]
Length = 188
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
TA + D+ S L K R+++LG + LI+A+ L+L+ ED EK I +Y+NS G +
Sbjct: 6 TARGERSYDIYSRLLKERVIFLGGEVEDRMANLIVAQLLFLESEDPEKDINIYINSPGGS 65
>gi|399049433|ref|ZP_10740394.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Brevibacillus sp. CF112]
gi|433545929|ref|ZP_20502269.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
agri BAB-2500]
gi|398052868|gb|EJL45105.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Brevibacillus sp. CF112]
gi|432182773|gb|ELK40334.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
agri BAB-2500]
Length = 193
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
T++ + D+ S L K+RI++LG + V ++A+ L+L ED +K I+LY+NS G +
Sbjct: 11 TSYGERSYDIYSRLLKDRIIFLGSAIDDQVANAVVAQLLFLAAEDPKKDIHLYINSPGGS 70
>gi|404330109|ref|ZP_10970557.1| ATP-dependent Clp protease proteolytic subunit
[Sporolactobacillus vineae DSM 21990 = SL153]
Length = 194
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V ++A+ L+L ED+EK I LY+NS G +
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANAVVAQLLFLAAEDSEKDISLYINSPGGS 70
>gi|303250639|ref|ZP_07336836.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|302650627|gb|EFL80786.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 196
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L K RI++L + LI+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 19 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPGGVVTAGLAIY 78
Query: 76 ALVFF 80
A + F
Sbjct: 79 ATMNF 83
>gi|359727808|ref|ZP_09266504.1| ATP-dependent Clp protease proteolytic subunit [Leptospira weilii
str. 2006001855]
gi|398332575|ref|ZP_10517280.1| ATP-dependent Clp protease proteolytic subunit [Leptospira
alexanderi serovar Manhao 3 str. L 60]
gi|417778909|ref|ZP_12426707.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira weilii str. 2006001853]
gi|421097690|ref|ZP_15558370.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira borgpetersenii str. 200901122]
gi|410780906|gb|EKR65487.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira weilii str. 2006001853]
gi|410799240|gb|EKS01320.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira borgpetersenii str. 200901122]
gi|456865181|gb|EMF83541.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira weilii serovar Topaz str. LT2116]
Length = 197
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T+ + D+ S L K+RI++LG + +I A+ L+L+ E+ E+ IYL
Sbjct: 3 VIPYVIEQTSRGERSYDIFSRLLKDRIIFLGNAINDDYANVITAQLLFLEAENPERDIYL 62
Query: 60 YLNSTG 65
YLNS G
Sbjct: 63 YLNSPG 68
>gi|303328063|ref|ZP_07358502.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfovibrio sp. 3_1_syn3]
gi|345891328|ref|ZP_08842176.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio sp.
6_1_46AFAA]
gi|302861889|gb|EFL84824.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfovibrio sp. 3_1_syn3]
gi|345048354|gb|EGW52191.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio sp.
6_1_46AFAA]
Length = 202
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV LG +V LI A+ L+L+ +D EK I LY+NS G +
Sbjct: 19 DIYSRLLKDRIVLLGSEVNDAVASLICAQLLFLESQDPEKEINLYINSPGGS 70
>gi|295695312|ref|YP_003588550.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
gi|295410914|gb|ADG05406.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
Length = 196
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG V L++A+ L+L ED +K I LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGTGIDDIVANLVVAQLLFLAAEDDKKDIRLYINSPGGS 70
>gi|239986153|ref|ZP_04706817.1| putative ATP-dependent Clp protease [Streptomyces roseosporus
NRRL 11379]
Length = 201
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 1 VIP-FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
V+P FT TA D S L RIV+LG + ++A+ +YL++ D ++P+ L
Sbjct: 9 VLPEFTERTATGTRTQDPYSKLLSERIVFLGSPIDDTAASDLIAQLMYLEHADPDRPVSL 68
Query: 60 YLNSTGTTEVGSFLCHALVF 79
Y+NS G GSF A V+
Sbjct: 69 YINSPG----GSFQAMAAVY 84
>gi|304316359|ref|YP_003851504.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|433654491|ref|YP_007298199.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|302777861|gb|ADL68420.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|433292680|gb|AGB18502.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 194
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV+LG L++A+ L+L+ ED +K I+LY+NS G + +F
Sbjct: 19 DIFSRLLKDRIVFLGEEINDVSASLVVAQLLFLEGEDPDKDIWLYINSPGGSITSAF 75
>gi|78043074|ref|YP_359188.1| ATP-dependent Clp protease proteolytic subunit [Carboxydothermus
hydrogenoformans Z-2901]
gi|90101405|sp|Q3AF96.1|CLPP_CARHZ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77995189|gb|ABB14088.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Carboxydothermus hydrogenoformans Z-2901]
Length = 195
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+R +++G V L++A+ L+L+ ED EK I+LY+NS G
Sbjct: 20 DIWSRLLKDRTIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHLYINSPG 69
>gi|237755491|ref|ZP_04584113.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237692355|gb|EEP61341.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 201
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+ LG + L++A+ L+L+ ED +K IY+Y+NS G
Sbjct: 24 DIYSRLLKDRIILLGTPIDDHIANLVVAQLLFLESEDPDKDIYMYINSPG 73
>gi|25019682|gb|AAN71768.1| ClpP2 [Synechococcus elongatus PCC 7942]
Length = 302
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L + RIV+LG +V + I+A+ L+L+ ED EK I LY+NS G
Sbjct: 115 DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPG 164
>gi|403068129|ref|ZP_10909461.1| ATP-dependent Clp protease proteolytic subunit [Oceanobacillus
sp. Ndiop]
Length = 196
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG +V I+A+ L+L+ ED EK I LY+NS G +
Sbjct: 19 DIYSRLLKDRIILLGSGIDDNVSNSIVAQLLFLEAEDPEKDISLYINSPGGS 70
>gi|188996270|ref|YP_001930521.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188931337|gb|ACD65967.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 201
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+ LG + L++A+ L+L+ ED +K IY+Y+NS G
Sbjct: 24 DIYSRLLKDRIILLGTPIDDHIANLVVAQLLFLESEDPDKDIYMYINSPG 73
>gi|33861299|ref|NP_892860.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|67460516|sp|Q7V1W0.1|CLPP1_PROMP RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|33633876|emb|CAE19201.1| Clp protease subunit [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 196
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG I+A+ L+L+ ED EK IY+Y+NS G +
Sbjct: 17 DIYSRLLRERIIFLGEQVTSDTANRIVAQLLFLEAEDPEKDIYMYINSPGGS 68
>gi|294101895|ref|YP_003553753.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aminobacterium colombiense DSM 12261]
gi|293616875|gb|ADE57029.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aminobacterium colombiense DSM 12261]
Length = 193
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG + ++A+ L+L+ ED +K I+LY+NS G
Sbjct: 18 DIYSRLLKDRIIFLGQEIDDPIANTVVAQLLFLESEDPDKDIHLYINSPG 67
>gi|428222892|ref|YP_007107062.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. PCC 7502]
gi|427996232|gb|AFY74927.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. PCC 7502]
Length = 214
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG SV +++++ L+L+ ED +K IY+Y+NS G +
Sbjct: 38 DIFSRLLRERIIFLGTEVNDSVASVMMSQLLFLEAEDPQKDIYVYINSPGGS 89
>gi|298714280|emb|CBJ27396.1| chloroplast clp protease P [Ectocarpus siliculosus]
Length = 264
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 5 TSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNST 64
T G EQ D+ S L K+RI+ LG V +++A+ LYL +D EK I LY+NS
Sbjct: 68 TVGEGSEQM--DVMSRLLKDRILLLGQEVNDEVGNVLVAQLLYLANDDPEKDITLYINSP 125
Query: 65 GTT 67
G +
Sbjct: 126 GGS 128
>gi|223994545|ref|XP_002286956.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220978271|gb|EED96597.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 260
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG V +++A+ LYL ED EK I LY+NS G +
Sbjct: 72 DVISRLLKDRILLLGTDVNDEVANVLVAQLLYLANEDPEKDITLYINSPGGS 123
>gi|411119403|ref|ZP_11391783.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
gi|410711266|gb|EKQ68773.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
Length = 229
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L + RIV+LG +V + ++A+ L+L+ ED EK I LY+NS G
Sbjct: 43 DIYSRLLRERIVFLGTPIDDAVADSVVAQLLFLEAEDPEKDIQLYINSPG 92
>gi|123966075|ref|YP_001011156.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9515]
gi|123200441|gb|ABM72049.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9515]
Length = 196
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG I+A+ L+L+ ED EK IY+Y+NS G +
Sbjct: 17 DIYSRLLRERIIFLGEQVTSDTANRIVAQLLFLEAEDPEKDIYMYINSPGGS 68
>gi|108804374|ref|YP_644311.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rubrobacter
xylanophilus DSM 9941]
gi|116243164|sp|Q1AVS9.1|CLPP_RUBXD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|108765617|gb|ABG04499.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rubrobacter
xylanophilus DSM 9941]
Length = 200
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 1 VIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEK 55
VIP+ EQ P D+ S L K+RI++LG V I+A+ L+L+ ED E+
Sbjct: 9 VIPYV----IEQSPRGERAMDIYSRLLKDRIIFLGTPVDDQVANAIMAQLLHLESEDPEQ 64
Query: 56 PIYLYLNSTGTT 67
I LY+NS G +
Sbjct: 65 DINLYINSPGGS 76
>gi|390934515|ref|YP_006392020.1| ATP-dependent Clp protease proteolytic subunit
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389570016|gb|AFK86421.1| ATP-dependent Clp protease proteolytic subunit
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 194
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV+LG L++A+ L+L+ ED +K I+LY+NS G + +F
Sbjct: 19 DIYSRLLKDRIVFLGEEINDVSASLVVAQLLFLEGEDPDKDIWLYINSPGGSITSAF 75
>gi|331090536|ref|ZP_08339389.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 2_1_46FAA]
gi|330405879|gb|EGG85407.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 2_1_46FAA]
Length = 193
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG +I+A+ L+L+ ED EK I LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGEEVTDVSASIIVAQLLHLEAEDPEKDIQLYINSPGGS 70
>gi|257460311|ref|ZP_05625414.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Campylobacter gracilis RM3268]
gi|257442376|gb|EEV17516.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Campylobacter gracilis RM3268]
Length = 194
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T+ + D+ S L K+RIV L +V I+A+ L+L+ ED +K IYL
Sbjct: 2 VIPYVIEQTSRGERSYDIYSRLLKDRIVMLSGEIDDAVASSIVAQLLFLEAEDPDKDIYL 61
Query: 60 YLNSTGTTEVGSF 72
Y+NS G F
Sbjct: 62 YINSPGGVVTSGF 74
>gi|21674371|ref|NP_662436.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
tepidum TLS]
gi|25008303|sp|Q8KC73.1|CLPP_CHLTE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|21647550|gb|AAM72778.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
tepidum TLS]
Length = 225
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG V LI+A+ ++L+ ED E+ IY+Y+NS G +
Sbjct: 44 DIFSRLLRERIIFLGSPIDEHVAGLIIAQLIFLESEDPERDIYIYINSPGGS 95
>gi|126657894|ref|ZP_01729047.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
gi|126620834|gb|EAZ91550.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
Length = 199
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ + L + RI++LG + I+A LYL ED KPIYLY+NS G +
Sbjct: 22 DIYTRLGQERIIFLGQEVTDGIANRIVALLLYLDSEDPSKPIYLYINSPGGS 73
>gi|124013820|sp|Q2RZ59.2|CLPP2_SALRD RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
Length = 233
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RIV++G + L +A+ LYL E +EKPI LY+NS G
Sbjct: 37 DIFSRLLKERIVFIGTPINDQIANLTVAQLLYLASESSEKPINLYINSPG 86
>gi|189500958|ref|YP_001960428.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
phaeobacteroides BS1]
gi|189496399|gb|ACE04947.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
phaeobacteroides BS1]
Length = 228
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG V L++A+ L+L+ ED E+ ++LY+NS G +
Sbjct: 44 DIFSRLLRERIIFLGTPIDDHVASLLMAQLLFLESEDPERDVFLYINSPGGS 95
>gi|338532521|ref|YP_004665855.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
gi|337258617|gb|AEI64777.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
Length = 203
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
DL S L K+RI+ LG V +I+A+ L+L+ ED +K I LY+NS G +
Sbjct: 18 DLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPGGS 69
>gi|340758793|ref|ZP_08695375.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
varium ATCC 27725]
gi|251836566|gb|EES65101.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
varium ATCC 27725]
Length = 191
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
T + D+ S L K+RI++LG +V I+A+ L+L+ ED +K I +Y+NS G
Sbjct: 10 TGRSERAYDIYSRLLKDRIIFLGTEIDDNVANAIVAQLLFLEAEDPDKDIIMYINSPG 67
>gi|291443095|ref|ZP_06582485.1| ATP-dependent Clp protease proteolytic subunit 5 [Streptomyces
roseosporus NRRL 15998]
gi|291346042|gb|EFE72946.1| ATP-dependent Clp protease proteolytic subunit 5 [Streptomyces
roseosporus NRRL 15998]
Length = 217
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 1 VIP-FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
V+P FT TA D S L RIV+LG + ++A+ +YL++ D ++P+ L
Sbjct: 25 VLPEFTERTATGTRTQDPYSKLLSERIVFLGSPIDDTAASDLIAQLMYLEHADPDRPVSL 84
Query: 60 YLNSTGTTEVGSFLCHALVF 79
Y+NS G GSF A V+
Sbjct: 85 YINSPG----GSFQAMAAVY 100
>gi|33862948|ref|NP_894508.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9313]
gi|67460517|sp|Q7V7R2.1|CLPP3_PROMM RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33634865|emb|CAE20851.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
MIT 9313]
Length = 197
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG I+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIIFLGEPVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGS 68
>gi|258514515|ref|YP_003190737.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum acetoxidans DSM 771]
gi|257778220|gb|ACV62114.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum acetoxidans DSM 771]
Length = 194
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+++G LI+A+ L+L+ ED EK I+LY+NS G
Sbjct: 20 DIYSRLLKDRIIFIGGPIEDYTANLIIAQLLFLEAEDPEKDIHLYINSPG 69
>gi|157413171|ref|YP_001484037.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9215]
gi|254526501|ref|ZP_05138553.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9202]
gi|157387746|gb|ABV50451.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9215]
gi|221537925|gb|EEE40378.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9202]
Length = 195
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG I+A+ L+L+ ED EK IY+Y+NS G +
Sbjct: 17 DIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPEKDIYMYINSPGGS 68
>gi|124023248|ref|YP_001017555.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9303]
gi|123963534|gb|ABM78290.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9303]
Length = 197
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG I+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIIFLGEPVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGS 68
>gi|108757731|ref|YP_634562.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
xanthus DK 1622]
gi|3023519|sp|O30612.1|CLPP2_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|2384690|gb|AAB97819.1| proteosome major subunit [Myxococcus xanthus DK 1622]
gi|108461611|gb|ABF86796.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus
xanthus DK 1622]
Length = 203
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
DL S L K+RI+ LG V +I+A+ L+L+ ED +K I LY+NS G +
Sbjct: 18 DLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPGGS 69
>gi|333897651|ref|YP_004471525.1| ATP-dependent Clp protease proteolytic subunit
[Thermoanaerobacterium xylanolyticum LX-11]
gi|333112916|gb|AEF17853.1| ATP-dependent Clp protease proteolytic subunit
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 194
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RIV+LG L++A+ L+L+ ED +K I+LY+NS G + +F
Sbjct: 19 DIYSRLLKDRIVFLGEEINDVSASLVVAQLLFLEGEDPDKDIWLYINSPGGSITSAF 75
>gi|374289297|ref|YP_005036382.1| ATP-dependent Clp protease proteolytic subunit [Bacteriovorax
marinus SJ]
gi|301167838|emb|CBW27423.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase
Clp) [Bacteriovorax marinus SJ]
Length = 202
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
TA + D+ S L +RIV+LG +V LI+A+ L+L+ +D + PI+ Y+NS G +
Sbjct: 17 TARGERQYDIYSRLLLDRIVFLGTQVNDTVANLIMAQMLFLETDDPDAPIHFYINSPGGS 76
>gi|373496129|ref|ZP_09586677.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
12_1B]
gi|404368998|ref|ZP_10974344.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
ulcerans ATCC 49185]
gi|313688290|gb|EFS25125.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
ulcerans ATCC 49185]
gi|371966040|gb|EHO83532.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
12_1B]
Length = 191
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
T + D+ S L K+RI++LG +V I+A+ L+L+ ED +K I +Y+NS G
Sbjct: 10 TGRSERAYDIYSRLLKDRIIFLGTEIDDNVANAIVAQLLFLEAEDPDKDIIMYINSPG 67
>gi|254409743|ref|ZP_05023524.1| Clp protease [Coleofasciculus chthonoplastes PCC 7420]
gi|196183740|gb|EDX78723.1| Clp protease [Coleofasciculus chthonoplastes PCC 7420]
Length = 198
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ + LY+ RI++LG + I+A LYL ED K IYLY+NS G +
Sbjct: 22 DIYNRLYRERIIFLGKEVDDEITNQIIAVMLYLDSEDNNKDIYLYINSPGGS 73
>gi|51892052|ref|YP_074743.1| ATP-dependent Clp protease proteolytic subunit [Symbiobacterium
thermophilum IAM 14863]
gi|67460469|sp|Q67QZ4.1|CLPP2_SYMTH RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|51855741|dbj|BAD39899.1| ATP-dependent Clp protease proteolytic subunit [Symbiobacterium
thermophilum IAM 14863]
Length = 200
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG S V + A+ L+L+ +D +K I +Y+NS+G
Sbjct: 20 DIYSRLLKDRIIFLGTSIDDQVANAVTAQLLFLESDDPDKEINMYINSSG 69
>gi|333977877|ref|YP_004515822.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333821358|gb|AEG14021.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 197
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+++G V L++A+ L+L+ ED EK I+ Y+NS G
Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHFYINSPG 69
>gi|226227816|ref|YP_002761922.1| ATP-dependent Clp protease proteolytic subunit [Gemmatimonas
aurantiaca T-27]
gi|226091007|dbj|BAH39452.1| ATP-dependent Clp protease proteolytic subunit [Gemmatimonas
aurantiaca T-27]
Length = 204
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L +RI++LG V +I+A+ L+L ++ EKPI+LY+NS G +
Sbjct: 21 DIFSRLLMDRIIFLGSPINDDVANIIIAQMLFLDADNPEKPIHLYINSPGGS 72
>gi|188585728|ref|YP_001917273.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Natranaerobius thermophilus JW/NM-WN-LF]
gi|259585960|sp|B2A158.1|CLPP_NATTJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|179350415|gb|ACB84685.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Natranaerobius thermophilus JW/NM-WN-LF]
Length = 197
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+++G + ++A+ L+L+ ED +K I+LY+NS G
Sbjct: 19 DIYSRLLKDRIIFIGTGINDDIANSVIAQMLFLESEDPDKDIHLYINSPG 68
>gi|303248988|ref|ZP_07335234.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfovibrio fructosovorans JJ]
gi|302489637|gb|EFL49575.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfovibrio fructosovorans JJ]
Length = 204
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+ LG + V LI A+ L+L+ ED EK I LY+NS G
Sbjct: 19 DIYSRLLKDRIILLGSAVDDYVANLICAQLLFLESEDPEKEISLYINSPG 68
>gi|317153552|ref|YP_004121600.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfovibrio aespoeensis Aspo-2]
gi|316943803|gb|ADU62854.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfovibrio aespoeensis Aspo-2]
Length = 202
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
T + D+ S L K+RI+ L + V LI A+ L+L+ ED EK IY+Y+NS G
Sbjct: 11 TGRTERAYDIYSRLLKDRIILLSSAIDDHVASLICAQLLFLESEDPEKEIYMYINSPG 68
>gi|256371559|ref|YP_003109383.1| Endopeptidase Clp [Acidimicrobium ferrooxidans DSM 10331]
gi|256008143|gb|ACU53710.1| Endopeptidase Clp [Acidimicrobium ferrooxidans DSM 10331]
Length = 204
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
DL S L + RI+ LG +V L+ ++ LYL+YED ++ I LY+NS G
Sbjct: 27 DLYSRLLRERIIILGTPIDDAVANLVCSQMLYLEYEDPDRDINLYINSPG 76
>gi|254432364|ref|ZP_05046067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
gi|197626817|gb|EDY39376.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
Length = 235
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG +V + ++A+ L+L+ ED EK I +Y+NS G +
Sbjct: 53 DIYSRLLRERIIFLGTGIDDAVADALVAQLLFLEAEDPEKDIQIYINSPGGS 104
>gi|428774108|ref|YP_007165896.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cyanobacterium stanieri PCC 7202]
gi|428688387|gb|AFZ48247.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cyanobacterium stanieri PCC 7202]
Length = 238
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + + + ++A+ LYL+ ED +K IY+Y+NS G +
Sbjct: 47 DVYSRLLRERIIFLGTAIDDKLADSVVAQLLYLEAEDPKKDIYIYINSPGGS 98
>gi|269215646|ref|ZP_06159500.1| Clp protease [Slackia exigua ATCC 700122]
gi|269131133|gb|EEZ62208.1| Clp protease [Slackia exigua ATCC 700122]
Length = 255
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 11 EQPPP-----DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNS-T 64
EQ P D+ S L +RIV+LG + V +++A+ L+L+ D EK I LY+NS
Sbjct: 62 EQSPRGERSYDIYSRLLNDRIVFLGDAIDDGVANIVVAQLLHLESSDPEKDISLYINSPG 121
Query: 65 GTTEVGSFLCHALVFFQ 81
G+ G + A+ F +
Sbjct: 122 GSVSAGLAIYDAMQFIR 138
>gi|193212075|ref|YP_001998028.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Chlorobaculum parvum NCIB 8327]
gi|193085552|gb|ACF10828.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Chlorobaculum parvum NCIB 8327]
Length = 225
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG V LI+A+ ++L+ ED E+ IY+Y+NS G +
Sbjct: 44 DIFSRLLRERIIFLGSPIDEHVAGLIMAQLIFLESEDPERDIYIYVNSPGGS 95
>gi|194334636|ref|YP_002016496.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prosthecochloris aestuarii DSM 271]
gi|194312454|gb|ACF46849.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prosthecochloris aestuarii DSM 271]
Length = 226
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG V L++A+ ++L+ ED E+ IY+Y+NS G +
Sbjct: 44 DIFSRLLRERIIFLGTPIDEHVASLLMAQLIFLESEDPERDIYIYINSPGGS 95
>gi|163847092|ref|YP_001635136.1| endopeptidase Clp [Chloroflexus aurantiacus J-10-fl]
gi|222524926|ref|YP_002569397.1| endopeptidase Clp [Chloroflexus sp. Y-400-fl]
gi|163668381|gb|ABY34747.1| Endopeptidase Clp [Chloroflexus aurantiacus J-10-fl]
gi|222448805|gb|ACM53071.1| Endopeptidase Clp [Chloroflexus sp. Y-400-fl]
Length = 221
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K RIV LG + LI+A+ L+L+ ED ++ I+LY+NS G +
Sbjct: 43 DIYSRLLKERIVILGTPIDDQIANLIVAQLLFLESEDPDRDIWLYINSPGGS 94
>gi|405363134|ref|ZP_11026132.1| ATP-dependent Clp protease proteolytic subunit [Chondromyces
apiculatus DSM 436]
gi|397090077|gb|EJJ20963.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 203
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
DL S L K+RI+ LG V +I+A+ L+L+ ED +K I LY+NS G +
Sbjct: 18 DLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPGGS 69
>gi|338729930|ref|YP_004659322.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
thermarum DSM 5069]
gi|335364281|gb|AEH50226.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
thermarum DSM 5069]
Length = 202
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV+LG L++A+ L+L+ ED +K I+LY+NS G +
Sbjct: 25 DIYSRLLKDRIVFLGYPIDDHTANLVVAQLLFLEAEDPDKDIHLYINSPGGS 76
>gi|126696140|ref|YP_001091026.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9301]
gi|126543183|gb|ABO17425.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9301]
Length = 195
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG I+A+ L+L+ ED EK IY+Y+NS G +
Sbjct: 17 DIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPEKDIYMYINSPGGS 68
>gi|442323969|ref|YP_007363990.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
gi|441491611|gb|AGC48306.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
Length = 203
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
DL S L K+RI+ LG V +I+A+ L+L+ ED +K I LY+NS G +
Sbjct: 18 DLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPGGS 69
>gi|428300044|ref|YP_007138350.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix
sp. PCC 6303]
gi|428236588|gb|AFZ02378.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix
sp. PCC 6303]
Length = 231
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG +V I+A+ L+L ED+EK I LY+NS G +
Sbjct: 44 DIYSRLLRERIIFLGTPIDDNVANSIVAQLLFLDAEDSEKDIQLYINSPGGS 95
>gi|385799530|ref|YP_005835934.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Halanaerobium praevalens DSM 2228]
gi|309388894|gb|ADO76774.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Halanaerobium praevalens DSM 2228]
Length = 198
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RIV+LG V ++A+ L+L+ ++ +K IYLY+NS G
Sbjct: 19 DIYSRLLKDRIVFLGSQVTDQVANTVIAQLLFLEADNPDKDIYLYINSPG 68
>gi|219849052|ref|YP_002463485.1| endopeptidase Clp [Chloroflexus aggregans DSM 9485]
gi|219543311|gb|ACL25049.1| Endopeptidase Clp [Chloroflexus aggregans DSM 9485]
Length = 221
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K RIV LG + LI+A+ L+L+ ED ++ I+LY+NS G +
Sbjct: 43 DIYSRLLKERIVILGTPIDDQIANLIVAQLLFLESEDPDRDIWLYINSPGGS 94
>gi|427720043|ref|YP_007068037.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix
sp. PCC 7507]
gi|427352479|gb|AFY35203.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix
sp. PCC 7507]
Length = 232
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG +V I+A+ L+L ED+EK I LY+NS G +
Sbjct: 45 DIYSRLLRERIIFLGTPIDDTVANSIVAQLLFLDAEDSEKDIQLYINSPGGS 96
>gi|434402424|ref|YP_007145309.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
gi|428256679|gb|AFZ22629.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
Length = 232
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG +V I+A+ L+L ED+EK I LY+NS G +
Sbjct: 45 DIYSRLLRERIIFLGTPIDDAVANSIVAQLLFLDAEDSEKDIQLYINSPGGS 96
>gi|308271899|emb|CBX28507.1| ATP-dependent Clp protease proteolytic subunit [uncultured
Desulfobacterium sp.]
Length = 206
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG + V L++A+ L+L+ ED +K I Y+NS G
Sbjct: 19 DIYSRLLKDRIIFLGTAMNDEVANLLIAQLLFLESEDPDKDINFYINSPG 68
>gi|434388321|ref|YP_007098932.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Chamaesiphon minutus PCC 6605]
gi|428019311|gb|AFY95405.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Chamaesiphon minutus PCC 6605]
Length = 215
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
DL S L + RI++LG V + ++A+ L+L+ ED EK I LY+NS G +
Sbjct: 41 DLYSRLLRERIIFLGGEVNDGVADTLVAQMLFLEAEDPEKDIQLYINSPGGS 92
>gi|336113414|ref|YP_004568181.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 2-6]
gi|347750878|ref|YP_004858443.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 36D1]
gi|335366844|gb|AEH52795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 2-6]
gi|347583396|gb|AEO99662.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 36D1]
Length = 196
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+ LG + +V I+++ L+L+ E+ EK IYLY+NS G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVSNSIVSQLLFLEAENPEKDIYLYINSPG 68
>gi|298710838|emb|CBJ26347.1| ATP-dependent Clp protease, proteolytic subunit [Ectocarpus
siliculosus]
Length = 237
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ + LY+ RI++LG + I+ LYL ED+ KPIYLY+N G + +
Sbjct: 89 DIYNRLYRERIIFLGQEIDDELANQIIGVLLYLDSEDSTKPIYLYVNCPGGSVIAGL 145
>gi|300866516|ref|ZP_07111206.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
gi|300335473|emb|CBN56366.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
Length = 229
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG V + I+A+ L+L ED EK I LY+NS G +
Sbjct: 42 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGS 93
>gi|159904323|ref|YP_001551667.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
MIT 9211]
gi|159889499|gb|ABX09713.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
MIT 9211]
Length = 200
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG V + ++A+ L+L+ ED EK I LY+NS G +
Sbjct: 25 DIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEAEDPEKDIQLYINSPGGS 76
>gi|348026429|ref|YP_004766234.1| ATP-dependent Clp protease proteolytic subunit [Megasphaera
elsdenii DSM 20460]
gi|341822483|emb|CCC73407.1| ATP-dependent Clp protease proteolytic subunit [Megasphaera
elsdenii DSM 20460]
Length = 201
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
TA + D+ S L K+RIV+LG +V I+A+ L+L+ E+ +K I+LY+NS G
Sbjct: 13 TAQGERSYDIYSRLLKDRIVFLGGPIDDAVANSIIAQLLFLEAENPDKDIHLYINSPG 70
>gi|307244056|ref|ZP_07526175.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Peptostreptococcus stomatis DSM 17678]
gi|306492580|gb|EFM64614.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Peptostreptococcus stomatis DSM 17678]
Length = 194
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG + L++A+ L+L+ +D +K I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGDEVNDATASLVVAQLLFLEADDPDKDIHLYINSPGGS 70
>gi|164687878|ref|ZP_02211906.1| hypothetical protein CLOBAR_01523 [Clostridium bartlettii DSM
16795]
gi|164603153|gb|EDQ96618.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium bartlettii DSM 16795]
Length = 217
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
V+P+ T + D+ S L +RI++LG + +++A+ L+L+ ED +K IYL
Sbjct: 20 VVPYVVQQTGNGERSYDIFSRLLCDRIIFLGEEVTDASASVVIAQLLFLEAEDPDKDIYL 79
Query: 60 YLNSTGTTEVGSF 72
Y+NS G + F
Sbjct: 80 YINSPGGSVTAGF 92
>gi|428773238|ref|YP_007165026.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cyanobacterium stanieri PCC 7202]
gi|428687517|gb|AFZ47377.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cyanobacterium stanieri PCC 7202]
Length = 195
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG + ++A+ L L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGQQVTDELANSLVAQLLLLEAEDPEKDIYLYINSPGGS 68
>gi|414075396|ref|YP_006994714.1| ATP-dependent ClpP protease [Anabaena sp. 90]
gi|413968812|gb|AFW92901.1| ATP-dependent ClpP protease [Anabaena sp. 90]
Length = 225
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG V I+A+ L+L EDAEK I LY+NS G +
Sbjct: 45 DIYSRLLRERIIFLGTPIDDVVANSIVAQLLFLDSEDAEKDIQLYINSPGGS 96
>gi|171915864|ref|ZP_02931334.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Verrucomicrobium spinosum DSM 4136]
Length = 237
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L K+RI+++G V +++A+ L+LQ +D +K I +Y+NS G + +
Sbjct: 34 DIYSRLLKDRIIFIGTPIDDQVANIVIAQLLFLQMQDPKKDINIYINSPGGSVTAGLAIY 93
Query: 76 ALVFFQISSIN 86
+ F +N
Sbjct: 94 DTMQFVTCDVN 104
>gi|434399879|ref|YP_007133883.1| ATP-dependent Clp protease proteolytic subunit ClpP [Stanieria
cyanosphaera PCC 7437]
gi|428270976|gb|AFZ36917.1| ATP-dependent Clp protease proteolytic subunit ClpP [Stanieria
cyanosphaera PCC 7437]
Length = 199
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 21 LYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
LY+ RI++LG + I+A LYL +D KPIYLY+NS G +
Sbjct: 27 LYRERIIFLGRGINDGIANQIIAIMLYLDSDDPGKPIYLYINSPGGS 73
>gi|325662430|ref|ZP_08151036.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 4_1_37FAA]
gi|331086220|ref|ZP_08335302.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 9_1_43BFAA]
gi|325471264|gb|EGC74488.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 4_1_37FAA]
gi|330406379|gb|EGG85893.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 9_1_43BFAA]
Length = 193
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG +I+A+ L+L+ ED EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGEEVNDVSASVIVAQLLFLEAEDPEKDIHLYINSPGGS 70
>gi|209546440|ref|YP_002278330.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209539297|gb|ACI59230.1| Endopeptidase Clp [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 203
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L + RIV+L +V L+ A+ L+L+ E+ +KPIYLY+NS G
Sbjct: 23 DIYSRLLRERIVFLNGEVNDTVSALVCAQLLFLEAENPKKPIYLYINSPG 72
>gi|383454037|ref|YP_005368026.1| ATP-dependent Clp protease proteolytic subunit [Corallococcus
coralloides DSM 2259]
gi|380732364|gb|AFE08366.1| ATP-dependent Clp protease proteolytic subunit [Corallococcus
coralloides DSM 2259]
Length = 206
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV LG V I+A+ L+L+ ED +K I LY+NS G +
Sbjct: 21 DIYSRLLKDRIVMLGTEIDDDVANAIVAQLLFLESEDPDKDINLYINSPGGS 72
>gi|347542087|ref|YP_004856723.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-rat-Yit]
gi|346985122|dbj|BAK80797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-rat-Yit]
Length = 195
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K RI++LG LI+A+ L+L+ ED +K I+LY+NS G +
Sbjct: 19 DIYSRLLKERIIFLGDEVNDVTASLIVAQLLFLESEDTDKDIHLYINSPGGS 70
>gi|238923369|ref|YP_002936885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale ATCC 33656]
gi|259585954|sp|C4ZGF4.1|CLPP_EUBR3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|238875044|gb|ACR74751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale ATCC 33656]
gi|291525457|emb|CBK91044.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale DSM 17629]
gi|291528435|emb|CBK94021.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale M104/1]
Length = 193
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG + L++A+ L+L+ ED K I+LY+NS G
Sbjct: 19 DIYSRLLKDRIIFLGEEVNETTASLVVAQLLFLESEDPNKDIHLYINSPG 68
>gi|260905350|ref|ZP_05913672.1| putative Clp protease proteolytic subunit [Brevibacterium linens
BL2]
Length = 193
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S+L NRI+YLG+ V I+A+ L+L+ E PI LY+NS G GS
Sbjct: 21 DVYSHLLGNRIIYLGVPIDDGVANTIIAQLLHLEASSRELPIQLYINSPG----GSLTAM 76
Query: 76 ALVFFQISSINA 87
++ + I A
Sbjct: 77 TAIYDAMHHIGA 88
>gi|33864600|ref|NP_896159.1| ATP-dependent Clp protease proteolytic subunit 2 [Synechococcus
sp. WH 8102]
gi|67460511|sp|Q7UA36.1|CLPP1_SYNPX RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|33632123|emb|CAE06579.1| ATP-dependent Clp protease proteolytic subunit 2 [Synechococcus
sp. WH 8102]
Length = 224
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG +V + ++A+ L+L+ ED EK I +Y+NS G +
Sbjct: 41 DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGS 92
>gi|298491711|ref|YP_003721888.1| endopeptidase Clp ['Nostoc azollae' 0708]
gi|298233629|gb|ADI64765.1| Endopeptidase Clp ['Nostoc azollae' 0708]
Length = 197
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
DL L++ RI++L + I+A FLYL +D KPIYLY+NS G +
Sbjct: 22 DLEDRLFRERIIFLTEEVDDGIANAIVAYFLYLDSDDQTKPIYLYINSPGGS 73
>gi|254421271|ref|ZP_05034989.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7335]
gi|196188760|gb|EDX83724.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7335]
Length = 269
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG + + + I+A+ L+L ED EK + LY+NS G +
Sbjct: 84 DIYSRLLRERIVFLGTPVMDDIADSIVAQLLFLDAEDPEKDVQLYINSPGGS 135
>gi|51246390|ref|YP_066274.1| ATP-dependent Clp protease, proteolytic subunit (ClpP)
[Desulfotalea psychrophila LSv54]
gi|50877427|emb|CAG37267.1| probable ATP-dependent Clp protease, proteolytic subunit (ClpP)
[Desulfotalea psychrophila LSv54]
Length = 213
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 11 EQPPP-----DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
EQ P D+ S L K RI++LG V +I+A+ L+L+ ED EK I Y+NS G
Sbjct: 19 EQTPRGERSYDIYSRLLKERIIFLGSGVNDDVANVIVAQLLFLEAEDPEKDITFYINSPG 78
Query: 66 TT 67
+
Sbjct: 79 GS 80
>gi|190150599|ref|YP_001969124.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303252091|ref|ZP_07338260.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248303|ref|ZP_07530328.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307263943|ref|ZP_07545546.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|226706435|sp|B3H252.1|CLPP_ACTP7 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189915730|gb|ACE61982.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302649073|gb|EFL79260.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306855173|gb|EFM87351.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306870705|gb|EFN02446.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 196
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++L + LI+A+ L+L+ ED EK IYLY+NS G
Sbjct: 19 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG 68
>gi|172039352|ref|YP_001805853.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|354552381|ref|ZP_08971689.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
gi|171700806|gb|ACB53787.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|353555703|gb|EHC25091.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
Length = 229
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG V + I+A+ L+L ED EK I LY+NS G +
Sbjct: 42 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGS 93
>gi|148238406|ref|YP_001223793.1| protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
gi|147846945|emb|CAK22496.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
Length = 229
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG +V + ++A+ L+L+ ED EK I +Y+NS G +
Sbjct: 46 DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQVYINSPGGS 97
>gi|443629253|ref|ZP_21113584.1| putative ATP-dependent Clp protease proteolytic subunit
[Streptomyces viridochromogenes Tue57]
gi|443337160|gb|ELS51471.1| putative ATP-dependent Clp protease proteolytic subunit
[Streptomyces viridochromogenes Tue57]
Length = 211
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Query: 5 TSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNST 64
+SGT + P S L + RIV+LG + ++A+F+YL+++D ++ I LY+NS
Sbjct: 18 SSGTRTQDP----YSKLLEERIVFLGTQIDDTSANDVMAQFMYLEHKDPDRDISLYINSP 73
Query: 65 GTTEVGSFLCHALVFFQI 82
G GSF + ++ I
Sbjct: 74 G----GSFSAMSAIYDTI 87
>gi|405983591|ref|ZP_11041896.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Slackia piriformis YIT 12062]
gi|404388406|gb|EJZ83488.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Slackia piriformis YIT 12062]
Length = 216
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 11 EQPPP-----DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNS-T 64
EQ P D+ S L +RIV+LG + V +++A+ L+L+ D EK I LY+NS
Sbjct: 23 EQSPRGERSYDIYSRLLNDRIVFLGSAIDDDVANIVVAQLLHLESADPEKDISLYINSPG 82
Query: 65 GTTEVGSFLCHALVFFQ 81
G+ G + A+ F +
Sbjct: 83 GSVSAGLAIYDAMQFIR 99
>gi|452995870|emb|CCQ92258.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
ultunense Esp]
Length = 197
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + L++A+ L+L ED +K IYLY+NS G +
Sbjct: 18 DIYSRLLKDRIIVLGSEIDDANANLVVAQLLFLAAEDPDKDIYLYINSPGGS 69
>gi|332296030|ref|YP_004437953.1| ATP-dependent Clp protease proteolytic subunit [Thermodesulfobium
narugense DSM 14796]
gi|332179133|gb|AEE14822.1| ATP-dependent Clp protease proteolytic subunit [Thermodesulfobium
narugense DSM 14796]
Length = 199
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L +RI++LG + V L++A+ L+L+ +D + IYLY+NS G
Sbjct: 24 DIYSKLLNDRIIFLGTAINEDVANLVVAQMLFLEADDPNRDIYLYINSPG 73
>gi|32035048|ref|ZP_00135114.1| COG0740: Protease subunit of ATP-dependent Clp proteases
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126208746|ref|YP_001053971.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165976699|ref|YP_001652292.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|307246197|ref|ZP_07528278.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307255177|ref|ZP_07536995.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307257345|ref|ZP_07539115.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307259615|ref|ZP_07541339.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307261756|ref|ZP_07543422.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|166201796|sp|A3N1T0.1|CLPP_ACTP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706436|sp|B0BQL3.1|CLPP_ACTPJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|126097538|gb|ABN74366.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165876800|gb|ABY69848.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|306852806|gb|EFM85030.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306862050|gb|EFM94026.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306864195|gb|EFM96108.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306866260|gb|EFM98124.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306868574|gb|EFN00385.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 196
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++L + LI+A+ L+L+ ED EK IYLY+NS G
Sbjct: 19 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG 68
>gi|402829243|ref|ZP_10878119.1| putative ATP-dependent Clp endopeptidase, proteolytic subunit
ClpP [Slackia sp. CM382]
gi|402284224|gb|EJU32727.1| putative ATP-dependent Clp endopeptidase, proteolytic subunit
ClpP [Slackia sp. CM382]
Length = 208
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 11 EQPPP-----DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNS-T 64
EQ P D+ S L +RIV+LG + V +++A+ L+L+ D EK I LY+NS
Sbjct: 15 EQSPRGERSYDIYSRLLNDRIVFLGDAIDDGVANIVVAQLLHLESSDPEKDISLYINSPG 74
Query: 65 GTTEVGSFLCHALVFFQ 81
G+ G + A+ F +
Sbjct: 75 GSVSAGLAIYDAMQFIR 91
>gi|284097335|ref|ZP_06385465.1| Peptidase S14, ClpP [Candidatus Poribacteria sp. WGA-A3]
gi|283831154|gb|EFC35134.1| Peptidase S14, ClpP [Candidatus Poribacteria sp. WGA-A3]
Length = 203
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG LI+A+ L+L+ ED EK I LY+NS G +
Sbjct: 18 DIYSRLLKDRIIFLGAPIDDIFSNLIIAQLLFLEAEDPEKDINLYINSPGGS 69
>gi|210634106|ref|ZP_03297994.1| hypothetical protein COLSTE_01912 [Collinsella stercoris DSM
13279]
gi|210158957|gb|EEA89928.1| endopeptidase Clp [Collinsella stercoris DSM 13279]
Length = 206
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 11 EQPPP-----DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
EQ P D+ S L +RIV+LG L++A+ L+L+ +DAEK I LY+NS G
Sbjct: 15 EQTPRGERSYDIYSRLLNDRIVFLGEEVNSVTANLVIAQLLHLESQDAEKDISLYINSPG 74
>gi|67923459|ref|ZP_00516936.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|67854694|gb|EAM49976.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
Length = 262
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG V + I+A+ L+L ED EK I LY+NS G +
Sbjct: 75 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGS 126
>gi|429732105|ref|ZP_19266725.1| endopeptidase Clp [Corynebacterium durum F0235]
gi|429144340|gb|EKX87459.1| endopeptidase Clp [Corynebacterium durum F0235]
Length = 202
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 IPF-TSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
IP+ T+ + + D+ S L RI+Y+G V ++A+ L+L+ ++A+ PI LY
Sbjct: 7 IPYVTTRSGNTEKTVDIYSRLLDERIIYIGTPIDDGVANAVIAQLLHLENDNADMPISLY 66
Query: 61 LNSTG 65
LNS G
Sbjct: 67 LNSAG 71
>gi|344208219|ref|YP_004793360.1| ATP-dependent Clp protease proteolytic subunit [Stenotrophomonas
maltophilia JV3]
gi|343779581|gb|AEM52134.1| ATP-dependent Clp protease proteolytic subunit [Stenotrophomonas
maltophilia JV3]
Length = 202
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L + RI++L +V L+ A+ L+L+ E+ EKPI+LY+NS G
Sbjct: 23 DIYSRLLRERIIFLNGEVDDTVSALVCAQLLFLESENPEKPIHLYINSPG 72
>gi|302035647|ref|YP_003795969.1| ATP-dependent Clp protease proteolytic subunit clpP [Candidatus
Nitrospira defluvii]
gi|300603711|emb|CBK40042.1| ATP-dependent Clp protease, proteolytic subunit clpP [Candidatus
Nitrospira defluvii]
Length = 211
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG LI+A+ L+L+ ED EK I LY+NS G +
Sbjct: 18 DIYSRLLKDRIIFLGAPIDDVFANLIIAQLLFLEAEDPEKDINLYINSPGGS 69
>gi|296134054|ref|YP_003641301.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermincola
potens JR]
gi|296032632|gb|ADG83400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermincola
potens JR]
Length = 194
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+++G V L++A+ L+L+ ED +K I++Y+NS G
Sbjct: 19 DIYSRLLKDRIIFIGGPIDDMVANLVIAQMLFLEAEDPDKDIHIYINSPG 68
>gi|251772219|gb|EES52789.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Leptospirillum ferrodiazotrophum]
Length = 201
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L ++RI+ LG +V L++A+ L+L+ ED+ K I LY+NS G
Sbjct: 18 DIYSRLLRDRIIILGTPIDDTVANLVIAQMLFLESEDSSKDINLYINSPG 67
>gi|313675245|ref|YP_004053241.1| ATP-dependent clp protease proteolytic subunit clpp [Marivirga
tractuosa DSM 4126]
gi|312941943|gb|ADR21133.1| ATP-dependent Clp protease proteolytic subunit ClpP [Marivirga
tractuosa DSM 4126]
Length = 222
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L +RI++LGM ++ +I A+ L+LQ DA+K I LY+NS G +
Sbjct: 48 DVFSRLIMDRIIFLGMQVDDNIANVITAQLLFLQSVDAKKDISLYINSPGGS 99
>gi|262201603|ref|YP_003272811.1| endopeptidase Clp [Gordonia bronchialis DSM 43247]
gi|262084950|gb|ACY20918.1| Endopeptidase Clp [Gordonia bronchialis DSM 43247]
Length = 201
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFL-- 73
D+ S L + RI+YLG V ++A+ L+L ++ E PI LY+NSTG + +F
Sbjct: 21 DVYSRLLEERIIYLGTPVDDDVANALIAQILHLDSDNPEAPIDLYINSTGGSVNATFALY 80
Query: 74 -----CHA 76
CHA
Sbjct: 81 DTMQYCHA 88
>gi|416405032|ref|ZP_11687843.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
gi|357261367|gb|EHJ10638.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
Length = 262
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG V + I+A+ L+L ED EK I LY+NS G +
Sbjct: 75 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGS 126
>gi|94968588|ref|YP_590636.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Koribacter versatilis Ellin345]
gi|116243126|sp|Q1IRD8.1|CLPP_ACIBL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|94550638|gb|ABF40562.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Koribacter versatilis Ellin345]
Length = 194
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L ++ I++LG +V LI+A+ L+L+ ED EK I LY+NS G +
Sbjct: 18 DIYSRLLRDNIIFLGTPIDDNVANLIIAQMLFLEAEDPEKDISLYINSPGGS 69
>gi|33240370|ref|NP_875312.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|67460522|sp|Q7VC22.1|CLPP1_PROMA RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|33237897|gb|AAP99964.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 196
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG I+A+ L+L+ ED EK I+LY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGEQVTNDSANRIVAQLLFLEAEDPEKDIFLYINSPGGS 68
>gi|148239550|ref|YP_001224937.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7803]
gi|147848089|emb|CAK23640.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
Length = 196
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + I+A+ L+L+ ED EK I+LY+NS G +
Sbjct: 17 DIYSRLLRERIIFLGEAVTSESANRIVAQLLFLEAEDPEKDIFLYINSPGGS 68
>gi|318041532|ref|ZP_07973488.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CB0101]
Length = 196
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG I+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIIFLGEPVTSESANRIVAQLLFLEAEDPEKDIYLYINSPGGS 68
>gi|307252913|ref|ZP_07534801.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306859551|gb|EFM91576.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 190
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++L + LI+A+ L+L+ ED EK IYLY+NS G
Sbjct: 13 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG 62
>gi|88808603|ref|ZP_01124113.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
gi|88787591|gb|EAR18748.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
Length = 196
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + I+A+ L+L+ ED EK I+LY+NS G +
Sbjct: 17 DIYSRLLRERIIFLGEAVTSESANRIVAQLLFLEAEDPEKDIFLYINSPGGS 68
>gi|403745050|ref|ZP_10954078.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus hesperidum URH17-3-68]
gi|403121705|gb|EJY55982.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus hesperidum URH17-3-68]
Length = 193
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV LG + +V I+A+ L+L +D EK I LY+NS G +
Sbjct: 19 DIYSRLLKDRIVLLGTAIDDNVANAIVAQLLFLAADDPEKDIQLYINSPGGS 70
>gi|225573066|ref|ZP_03781821.1| hypothetical protein RUMHYD_01257 [Blautia hydrogenotrophica DSM
10507]
gi|225039572|gb|EEG49818.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Blautia hydrogenotrophica DSM 10507]
Length = 193
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG L++A+ L+L+ EDA K I LY+NS G
Sbjct: 19 DIYSRLLKDRIIFLGEEVNDVTASLVVAQLLFLESEDAGKDIQLYINSPG 68
>gi|229815146|ref|ZP_04445483.1| hypothetical protein COLINT_02192 [Collinsella intestinalis DSM
13280]
gi|229809376|gb|EEP45141.1| hypothetical protein COLINT_02192 [Collinsella intestinalis DSM
13280]
Length = 206
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L +RIV+LG L++A+ L+L+ +DAEK I LY+NS G
Sbjct: 25 DIYSRLLNDRIVFLGEEVNSVTANLVIAQLLHLESQDAEKDISLYINSPG 74
>gi|119493580|ref|ZP_01624244.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
gi|119452570|gb|EAW33753.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
Length = 198
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ + L + RI++LG + I+A LYL +D KPIYLY+NS G +
Sbjct: 22 DIYTRLNQERIIFLGQEVTDGLANRIVASMLYLDSDDPNKPIYLYINSPGGS 73
>gi|60389557|sp|Q6AK59.2|CLPP_DESPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 203
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 11 EQPPP-----DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
EQ P D+ S L K RI++LG V +I+A+ L+L+ ED EK I Y+NS G
Sbjct: 9 EQTPRGERSYDIYSRLLKERIIFLGSGVNDDVANVIVAQLLFLEAEDPEKDITFYINSPG 68
Query: 66 TT 67
+
Sbjct: 69 GS 70
>gi|194366563|ref|YP_002029173.1| ATP-dependent Clp protease proteolytic subunit [Stenotrophomonas
maltophilia R551-3]
gi|194349367|gb|ACF52490.1| Endopeptidase Clp [Stenotrophomonas maltophilia R551-3]
Length = 202
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L + RI++L +V L+ A+ L+L+ E+ EKPI+LY+NS G
Sbjct: 23 DIYSRLLRERIIFLNGEVDDTVSALVCAQLLFLESENPEKPIHLYINSPG 72
>gi|374709641|ref|ZP_09714075.1| ATP-dependent Clp protease proteolytic subunit
[Sporolactobacillus inulinus CASD]
Length = 194
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L K+RI+ LG + +V ++A+ L+L ED+EK I +Y+NS G GS
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANAVVAQLLFLAAEDSEKDISIYINSPG----GSITAG 74
Query: 76 ALVF 79
+F
Sbjct: 75 MAIF 78
>gi|346310669|ref|ZP_08852683.1| Clp protease [Collinsella tanakaei YIT 12063]
gi|345897303|gb|EGX67226.1| Clp protease [Collinsella tanakaei YIT 12063]
Length = 207
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 11 EQPPP-----DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
EQ P D+ S L +RI++LG L++A+ L+L+ +DAEK I LY+NS G
Sbjct: 15 EQTPRGERSYDIYSRLLNDRIIFLGEEINSVTANLVIAQLLHLESQDAEKDISLYINSPG 74
>gi|78211620|ref|YP_380399.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Synechococcus sp. CC9605]
gi|260436691|ref|ZP_05790661.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. WH 8109]
gi|78196079|gb|ABB33844.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. CC9605]
gi|260414565|gb|EEX07861.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. WH 8109]
Length = 224
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG +V + ++A+ L+L+ ED EK I +Y+NS G +
Sbjct: 41 DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGS 92
>gi|374711460|ref|ZP_09715894.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sporolactobacillus inulinus CASD]
Length = 195
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+R+++LG V I+A+ L+L ED+EK I +Y+NS G + F
Sbjct: 21 DIYSRLLKDRVIFLGSEINDEVANSIVAQLLFLASEDSEKDISIYINSPGGSVSAGF 77
>gi|116074350|ref|ZP_01471612.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. RS9916]
gi|116069655|gb|EAU75407.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. RS9916]
Length = 229
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG V + ++A+ L+L+ ED EK I +Y+NS G +
Sbjct: 46 DIYSRLLRERIIFLGTGIDDQVADALVAQLLFLEAEDPEKDIQIYINSPGGS 97
>gi|392407107|ref|YP_006443715.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaerobaculum mobile DSM 13181]
gi|390620243|gb|AFM21390.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaerobaculum mobile DSM 13181]
Length = 192
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG + L++A+ L+L+ ED +K I LY+NS G +
Sbjct: 18 DIYSRLLKDRIIFLGDVIEDHIANLVVAQMLFLESEDPDKDINLYINSPGGS 69
>gi|291569895|dbj|BAI92167.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
Length = 236
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
DL S L ++RI++LG V + A+ L+L+ ED EK I LY+NS G +
Sbjct: 50 DLYSRLLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQLYINSPGGS 101
>gi|119485223|ref|ZP_01619608.1| Peptidase S14, ClpP [Lyngbya sp. PCC 8106]
gi|119457451|gb|EAW38576.1| Peptidase S14, ClpP [Lyngbya sp. PCC 8106]
Length = 238
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
DL S L ++RI++LG + + + A+ L+L ED EK I LY+NS G +
Sbjct: 52 DLYSRLLRDRIIFLGTAIDDEIANAVSAQMLFLDAEDPEKDIQLYINSPGGS 103
>gi|226470102|emb|CAX70332.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Schistosoma japonicum]
Length = 179
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+ L + V L++A+ LYLQ ED + PI++Y+NS G
Sbjct: 64 DIYSRLLKDRIICLMGAISDEVAGLVVAQLLYLQSEDKKIPIHIYINSPG 113
>gi|189219051|ref|YP_001939692.1| ATP-dependent Clp protease proteolytic subunit [Methylacidiphilum
infernorum V4]
gi|189185909|gb|ACD83094.1| ATP-dependent Clp protease proteolytic subunit [Methylacidiphilum
infernorum V4]
Length = 219
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RIV++G ++ L++A+ L+LQ ED +K I LY++S G
Sbjct: 28 DIFSRLLKDRIVFIGTPIDDNMANLVIAQLLFLQMEDPKKDINLYIHSPG 77
>gi|408825009|ref|ZP_11209899.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
geniculata N1]
Length = 202
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L + RI++L +V L+ A+ L+L+ E+ EKPI+LY+NS G
Sbjct: 23 DIYSRLLRERIIFLNGEVDDAVSALVCAQLLFLESENPEKPIHLYINSPG 72
>gi|156541196|ref|XP_001599209.1| PREDICTED: putative ATP-dependent Clp protease proteolytic
subunit, mitochondrial-like [Nasonia vitripennis]
Length = 234
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI+ L + L++A+ L+LQ E ++KPI+LY+NS G
Sbjct: 41 DIYSRLLKERIICLMGPITDDISSLVVAQLLFLQSESSKKPIHLYINSPG 90
>gi|116256435|sp|Q3ANI8.2|CLPP1_SYNSC RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
Length = 207
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG +V + ++A+ L+L+ ED EK I +Y+NS G +
Sbjct: 24 DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGS 75
>gi|209525239|ref|ZP_03273781.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
gi|376006287|ref|ZP_09783579.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|423065156|ref|ZP_17053946.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis C1]
gi|209494254|gb|EDZ94567.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
gi|375325348|emb|CCE19332.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|406713288|gb|EKD08459.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis C1]
Length = 237
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
DL S L ++RI++LG V + A+ L+L+ ED EK I LY+NS G +
Sbjct: 51 DLYSRLLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQLYINSPGGS 102
>gi|409993296|ref|ZP_11276442.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis str. Paraca]
gi|409935831|gb|EKN77349.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis str. Paraca]
Length = 237
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
DL S L ++RI++LG V + A+ L+L+ ED EK I LY+NS G +
Sbjct: 51 DLYSRLLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQLYINSPGGS 102
>gi|226489631|emb|CAX74966.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Schistosoma japonicum]
Length = 249
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+ L + V L++A+ LYLQ ED + PI++Y+NS G
Sbjct: 60 DIYSRLLKDRIICLMGAISDEVAGLVVAQLLYLQSEDKKIPIHIYINSPG 109
>gi|33241265|ref|NP_876207.1| protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|67460520|sp|Q7V9L6.1|CLPP3_PROMA RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33238795|gb|AAQ00860.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 216
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L + RI++LG + + ++A+ L+L+ ED EK I LY+NS G GS
Sbjct: 41 DIYSRLLRERIIFLGTDVNDQIADALVAQMLFLEAEDPEKDIQLYINSPG----GSVTAG 96
Query: 76 ALVFFQISSIN 86
++ + +N
Sbjct: 97 LAIYDTMQQVN 107
>gi|282898110|ref|ZP_06306105.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281197254|gb|EFA72155.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 236
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + +V I+A+ L+L ED EK + LY+NS G +
Sbjct: 49 DIYSRLLRERIIFLGTAIDDNVANSIVAQLLFLDAEDPEKDVQLYINSPGGS 100
>gi|282900541|ref|ZP_06308485.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281194594|gb|EFA69547.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 237
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + +V I+A+ L+L ED EK + LY+NS G +
Sbjct: 50 DIYSRLLRERIIFLGTAIDDNVANSIVAQLLFLDAEDPEKDVQLYINSPGGS 101
>gi|223938520|ref|ZP_03630412.1| Endopeptidase Clp [bacterium Ellin514]
gi|223892782|gb|EEF59251.1| Endopeptidase Clp [bacterium Ellin514]
Length = 215
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L +RIV+LG V LI+A+ L+LQ D +K I+LY+NS G + +
Sbjct: 26 DIYSRLLVDRIVFLGTPVDDMVANLIIAQLLFLQMSDPKKDIHLYINSPGGSVTAGLAIY 85
Query: 76 ALVFFQISSIN 86
+ F +N
Sbjct: 86 DTMQFLTCDVN 96
>gi|87124411|ref|ZP_01080260.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9917]
gi|86167983|gb|EAQ69241.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9917]
Length = 196
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG I+A+ L+L+ ED +K IYLY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGEPVTSDSANRIVAQLLFLEAEDPDKDIYLYINSPGGS 68
>gi|342731984|ref|YP_004770823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|384455401|ref|YP_005667995.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|417962125|ref|ZP_12604399.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-2]
gi|417963799|ref|ZP_12605667.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-3]
gi|417967677|ref|ZP_12608746.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-co]
gi|418016623|ref|ZP_12656188.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-mouse-NYU]
gi|418372234|ref|ZP_12964326.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-mouse-SU]
gi|342329439|dbj|BAK56081.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|345506958|gb|EGX29252.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-mouse-NYU]
gi|346983743|dbj|BAK79419.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|380331068|gb|EIA22177.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-2]
gi|380331769|gb|EIA22747.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-3]
gi|380340900|gb|EIA29436.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-co]
gi|380341903|gb|EIA30348.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-mouse-SU]
Length = 194
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K RI++LG L++A+ L+L+ ED +K I+LY+NS G +
Sbjct: 19 DIYSRLLKERIIFLGDEVNDVTASLVVAQLLFLESEDTDKDIHLYINSPGGS 70
>gi|218247705|ref|YP_002373076.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|257060958|ref|YP_003138846.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
gi|218168183|gb|ACK66920.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|256591124|gb|ACV02011.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
Length = 229
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG V + I+A+ L+L ED EK I LY+NS G +
Sbjct: 42 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGS 93
>gi|116071740|ref|ZP_01469008.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. BL107]
gi|116065363|gb|EAU71121.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. BL107]
Length = 224
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG +V + ++A+ L+L+ ED EK I +Y+NS G +
Sbjct: 41 DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYVNSPGGS 92
>gi|334139130|ref|ZP_08512526.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
gi|333603020|gb|EGL14444.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
Length = 200
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG V I+A+ L+L +D +K I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGTPVNDQVANAIIAQLLFLDAQDPDKDIHLYINSPGGS 70
>gi|189345948|ref|YP_001942477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
limicola DSM 245]
gi|189340095|gb|ACD89498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
limicola DSM 245]
Length = 225
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG V L++A+ ++L+ ED E+ I++Y+NS G +
Sbjct: 44 DIFSRLLRERIIFLGSGIDEHVAGLVMAQLIFLESEDPERDIFIYINSPGGS 95
>gi|78183646|ref|YP_376080.1| peptidase S14, ClpP [Synechococcus sp. CC9902]
gi|124013821|sp|Q3B0U1.1|CLPP2_SYNS9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|78167940|gb|ABB25037.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Synechococcus sp. CC9902]
Length = 207
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG +V + ++A+ L+L+ ED EK I +Y+NS G +
Sbjct: 24 DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYVNSPGGS 75
>gi|403731592|ref|ZP_10949351.1| ATP-dependent Clp protease proteolytic subunit [Gordonia
rhizosphera NBRC 16068]
gi|403202134|dbj|GAB93682.1| ATP-dependent Clp protease proteolytic subunit [Gordonia
rhizosphera NBRC 16068]
Length = 202
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFL-- 73
D+ S L +RI+YLG V ++A+ L+L ++ + PI LY+NS G + +F
Sbjct: 21 DIYSRLLDDRIIYLGTEIDDGVANALIAQILHLDSDNPDAPIELYINSAGGSVTAAFALY 80
Query: 74 -----CHA 76
CHA
Sbjct: 81 DTMQYCHA 88
>gi|88809960|ref|ZP_01125465.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. WH 7805]
gi|88786150|gb|EAR17312.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. WH 7805]
Length = 229
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG +V + ++A+ L+L+ ED EK I +Y+NS G +
Sbjct: 46 DIYSRLLRERIIFLGTGVDDAVADALVAQLLFLEAEDPEKDIQVYINSPGGS 97
>gi|411005193|ref|ZP_11381522.1| ATP-dependent Clp protease [Streptomyces globisporus C-1027]
Length = 201
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 1 VIP-FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
V+P FT TA D S L RIV+LG + ++A+ +YL++ D ++P+ L
Sbjct: 9 VLPEFTERTATGTRTQDPYSKLLSERIVFLGSPIDDTAATDLIAQLMYLEHADPDRPLSL 68
Query: 60 YLNSTGTTEVGSFLCHALVF 79
Y+NS G GSF A V+
Sbjct: 69 YINSPG----GSFQAMAAVY 84
>gi|410462600|ref|ZP_11316168.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfovibrio magneticus str. Maddingley MBC34]
gi|409984260|gb|EKO40581.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfovibrio magneticus str. Maddingley MBC34]
Length = 202
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L ++RI+ LG + V LI A+ L+L+ ED EK I++Y+NS G
Sbjct: 19 DIYSRLLRDRIILLGSAVDDYVANLICAQLLFLESEDPEKEIFMYINSPG 68
>gi|359768964|ref|ZP_09272729.1| ATP-dependent Clp protease proteolytic subunit [Gordonia
polyisoprenivorans NBRC 16320]
gi|378717056|ref|YP_005281945.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gordonia
polyisoprenivorans VH2]
gi|359313661|dbj|GAB25562.1| ATP-dependent Clp protease proteolytic subunit [Gordonia
polyisoprenivorans NBRC 16320]
gi|375751759|gb|AFA72579.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gordonia
polyisoprenivorans VH2]
Length = 201
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFL-- 73
D+ S L +RI+YLG V ++A+ L+L ++ E PI LY+NS G + + +F
Sbjct: 21 DIYSRLLDDRILYLGTELDDGVANALIAQLLHLDSDNPEAPIDLYINSPGGSVMATFALY 80
Query: 74 -----CHA 76
CHA
Sbjct: 81 DTMQYCHA 88
>gi|152977369|ref|YP_001376886.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
cytotoxicus NVH 391-98]
gi|152026121|gb|ABS23891.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cytotoxicus NVH 391-98]
Length = 193
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+++ L+L+ +D EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHLYINSPGGS 70
>gi|452991802|emb|CCQ96761.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
ultunense Esp]
Length = 194
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++LG +LI+A+ L+L+ ED +K I LY+NS G
Sbjct: 19 DIYSRLLKERIIFLGGEVNDVTADLIVAQLLFLEAEDPDKDIQLYINSPG 68
>gi|352517153|ref|YP_004886470.1| ATP-dependent Clp protease proteolytic subunit [Tetragenococcus
halophilus NBRC 12172]
gi|348601260|dbj|BAK94306.1| ATP-dependent Clp protease proteolytic subunit [Tetragenococcus
halophilus NBRC 12172]
Length = 193
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
+A + D+ S L K+RI+ L + I+++ L+L +D+EK IYLY+NS G +
Sbjct: 11 SAQGERAYDIYSRLLKDRIIMLSGEVTDDLSNSIISQLLFLDAQDSEKDIYLYINSPGGS 70
Query: 68 EVGSFLCHALVFF 80
F + + F
Sbjct: 71 VTAGFAIYDTINF 83
>gi|452973637|gb|EME73459.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
sonorensis L12]
Length = 190
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNS-TGT 66
TA + D+ S L K+RI+ +G F + + A+ L+L ED EK I +Y+NS G+
Sbjct: 11 TAAGERSYDIFSRLLKDRIIMIGSEFTDDLANRVTAQLLFLSAEDDEKDISIYINSPGGS 70
Query: 67 TEVG 70
T G
Sbjct: 71 TSAG 74
>gi|417960453|ref|ZP_12603051.1| ATP-dependent Clp protease proteolytic subunit, partial
[Candidatus Arthromitus sp. SFB-1]
gi|380331000|gb|EIA22124.1| ATP-dependent Clp protease proteolytic subunit, partial
[Candidatus Arthromitus sp. SFB-1]
Length = 101
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++LG L++A+ L+L+ ED +K I+LY+NS G
Sbjct: 19 DIYSRLLKERIIFLGDEVNDVTASLVVAQLLFLESEDTDKDIHLYINSPG 68
>gi|383787009|ref|YP_005471578.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium pennivorans DSM 9078]
gi|383109856|gb|AFG35459.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium pennivorans DSM 9078]
Length = 206
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG + V L++A+ L+L+ E+ +K I LY+NS G
Sbjct: 30 DIYSRLLKDRIIFLGSAIDDHVANLVVAQLLFLEAENPDKDIQLYINSPG 79
>gi|340358028|ref|ZP_08680626.1| ATP-dependent Clp protease, protease subunit [Sporosarcina
newyorkensis 2681]
gi|339615567|gb|EGQ20241.1| ATP-dependent Clp protease, protease subunit [Sporosarcina
newyorkensis 2681]
Length = 197
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG +V I+A+ L+L+ ED EK I +Y+NS G +
Sbjct: 19 DIYSRLLKDRIIMLGSGIDDNVANSIVAQLLFLEAEDPEKDISIYINSPGGS 70
>gi|239907453|ref|YP_002954194.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
magneticus RS-1]
gi|259585949|sp|C4XH03.1|CLPP_DESMR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|239797319|dbj|BAH76308.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
magneticus RS-1]
Length = 202
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L ++RI+ LG + V LI A+ L+L+ ED EK I++Y+NS G
Sbjct: 19 DIYSRLLRDRIILLGSAVDDYVANLICAQLLFLESEDPEKEIFMYINSPG 68
>gi|402487234|ref|ZP_10834056.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium sp.
CCGE 510]
gi|401813808|gb|EJT06148.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium sp.
CCGE 510]
Length = 202
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L + RI++L +V L+ A+ L+L+ E+ +KPIYLY+NS G
Sbjct: 23 DIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENPKKPIYLYINSPG 72
>gi|172036826|ref|YP_001803327.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|354554635|ref|ZP_08973939.1| Endopeptidase Clp [Cyanothece sp. ATCC 51472]
gi|171698280|gb|ACB51261.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|353553444|gb|EHC22836.1| Endopeptidase Clp [Cyanothece sp. ATCC 51472]
Length = 199
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ + L + RI++LG ++ I+A LYL ED KPIYLY+NS G +
Sbjct: 22 DIYTRLGQERIIFLGQEVNDAIANRIVALLLYLDSEDPSKPIYLYINSPGGS 73
>gi|254423153|ref|ZP_05036871.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. PCC 7335]
gi|196190642|gb|EDX85606.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. PCC 7335]
Length = 201
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++L LI+A+ L+L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIIFLHGQVTADSMNLIVAQMLFLEAEDPEKDIYLYINSPGGS 68
>gi|376004076|ref|ZP_09781843.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent
serine proteases [Arthrospira sp. PCC 8005]
gi|375327546|emb|CCE17596.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent
serine proteases [Arthrospira sp. PCC 8005]
Length = 200
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
DL S L ++RI++LG V + A+ L+L+ ED EK I LY+NS G +
Sbjct: 14 DLYSRLLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQLYINSPGGS 65
>gi|404329046|ref|ZP_10969494.1| ATP-dependent Clp protease proteolytic subunit
[Sporolactobacillus vineae DSM 21990 = SL153]
Length = 193
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+R+++LG + I+A+ L+LQ ED+ K I +Y+NS G + F
Sbjct: 19 DIYSRLLKDRVIFLGSEINDEIANSIVAQLLFLQSEDSTKDISIYINSPGGSVSAGF 75
>gi|257870013|ref|ZP_05649666.1| peptidase S14 [Enterococcus gallinarum EG2]
gi|357050271|ref|ZP_09111475.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
saccharolyticus 30_1]
gi|257804177|gb|EEV32999.1| peptidase S14 [Enterococcus gallinarum EG2]
gi|355381758|gb|EHG28874.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
saccharolyticus 30_1]
Length = 196
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L K+RI+ L + I+A+ L+L +D+EK IYLY+NS G GS
Sbjct: 19 DIYSRLLKDRIIMLSGQVTDDLANSIIAQLLFLDAQDSEKDIYLYINSPG----GSVTAG 74
Query: 76 ALVFFQISSINAS 88
+F ++ I A
Sbjct: 75 LAIFDTMNFIKAD 87
>gi|257865163|ref|ZP_05644816.1| peptidase S14 [Enterococcus casseliflavus EC30]
gi|257871487|ref|ZP_05651140.1| peptidase S14 [Enterococcus casseliflavus EC10]
gi|257874785|ref|ZP_05654438.1| peptidase S14 [Enterococcus casseliflavus EC20]
gi|325571575|ref|ZP_08147075.1| ATP-dependent Clp protease, protease subunit [Enterococcus
casseliflavus ATCC 12755]
gi|420261859|ref|ZP_14764502.1| peptidase S14 [Enterococcus sp. C1]
gi|257799097|gb|EEV28149.1| peptidase S14 [Enterococcus casseliflavus EC30]
gi|257805651|gb|EEV34473.1| peptidase S14 [Enterococcus casseliflavus EC10]
gi|257808951|gb|EEV37771.1| peptidase S14 [Enterococcus casseliflavus EC20]
gi|325156051|gb|EGC68247.1| ATP-dependent Clp protease, protease subunit [Enterococcus
casseliflavus ATCC 12755]
gi|394770881|gb|EJF50665.1| peptidase S14 [Enterococcus sp. C1]
Length = 196
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L K+RI+ L + I+A+ L+L +D+EK IYLY+NS G GS
Sbjct: 19 DIYSRLLKDRIIMLSGQVTDDLANSIIAQLLFLDAQDSEKDIYLYINSPG----GSVTAG 74
Query: 76 ALVFFQISSINAS 88
+F ++ I A
Sbjct: 75 LAIFDTMNFIKAD 87
>gi|375306341|ref|ZP_09771639.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus sp.
Aloe-11]
gi|375081594|gb|EHS59804.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus sp.
Aloe-11]
Length = 198
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L K+RI+ LG V I+A+ L+L ED EK I+LY+NS G GS
Sbjct: 19 DIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPG----GSITAG 74
Query: 76 ALVF 79
+F
Sbjct: 75 MAIF 78
>gi|310639654|ref|YP_003944412.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|386038858|ref|YP_005957812.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
gi|309244604|gb|ADO54171.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|343094896|emb|CCC83105.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
Length = 198
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L K+RI+ LG V I+A+ L+L ED EK I+LY+NS G GS
Sbjct: 19 DIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPG----GSITAG 74
Query: 76 ALVF 79
+F
Sbjct: 75 MAIF 78
>gi|148655690|ref|YP_001275895.1| endopeptidase Clp [Roseiflexus sp. RS-1]
gi|148567800|gb|ABQ89945.1| Endopeptidase Clp [Roseiflexus sp. RS-1]
Length = 203
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
DL S L + RI+ LG V LI+A+ LYLQ+ D ++ I+ Y+NS G +
Sbjct: 21 DLFSRLLQERIIMLGTPIDDEVASLIVAQLLYLQHTDPDRDIWFYINSPGGS 72
>gi|390456222|ref|ZP_10241750.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
peoriae KCTC 3763]
Length = 198
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L K+RI+ LG V I+A+ L+L ED EK I+LY+NS G GS
Sbjct: 19 DIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPG----GSITAG 74
Query: 76 ALVF 79
+F
Sbjct: 75 MAIF 78
>gi|320354136|ref|YP_004195475.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfobulbus propionicus DSM 2032]
gi|320122638|gb|ADW18184.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfobulbus propionicus DSM 2032]
Length = 200
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 11 EQPPP-----DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
EQ P D+ S L K RI++LG V L++A+ L+L+ ED +K I Y+NS G
Sbjct: 9 EQSPRGERAFDIYSRLLKERIIFLGTQVNDDVASLVVAQLLFLEAEDPDKDITFYINSPG 68
Query: 66 TT 67
+
Sbjct: 69 GS 70
>gi|315127189|ref|YP_004069192.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
sp. SM9913]
gi|315015703|gb|ADT69041.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
sp. SM9913]
Length = 205
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
TA + D+ S L K RI++L ++ LILA+ L+L+ E+ EK I+LY+NS G +
Sbjct: 20 TAKGERSFDIYSRLLKERIIFLTGQVEDNMANLILAQMLFLESENPEKDIFLYINSPGGS 79
>gi|229916596|ref|YP_002885242.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Exiguobacterium sp. AT1b]
gi|229468025|gb|ACQ69797.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Exiguobacterium sp. AT1b]
Length = 191
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+A+ L+L ED EK I LY+NS G +
Sbjct: 18 DIYSRLLKDRIILLGSAIDDNVANSIVAQLLFLAAEDPEKDISLYINSPGGS 69
>gi|308067009|ref|YP_003868614.1| ATP-dependent Clp protease proteolytic subunit(endopeptidase Clp)
[Paenibacillus polymyxa E681]
gi|305856288|gb|ADM68076.1| ATP-dependent Clp protease proteolytic subunit(Endopeptidase Clp)
[Paenibacillus polymyxa E681]
Length = 193
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L K+RI+ LG V I+A+ L+L ED EK I+LY+NS G GS
Sbjct: 14 DIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPG----GSITAG 69
Query: 76 ALVF 79
+F
Sbjct: 70 MAIF 73
>gi|289422712|ref|ZP_06424552.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Peptostreptococcus anaerobius 653-L]
gi|289156891|gb|EFD05516.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Peptostreptococcus anaerobius 653-L]
Length = 194
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG L++A+ L+L+ +D +K I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGDEVNDQTASLVVAQMLFLEADDPDKDIHLYINSPGGS 70
>gi|154249786|ref|YP_001410611.1| ATP-dependent Clp protease proteolytic subunit [Fervidobacterium
nodosum Rt17-B1]
gi|154153722|gb|ABS60954.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium nodosum Rt17-B1]
Length = 206
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG + V L++A+ L+L+ E+ +K I LY+NS G
Sbjct: 30 DIYSRLLKDRIIFLGSAIDDHVANLVVAQLLFLEAENPDKDIQLYINSPG 79
>gi|442319289|ref|YP_007359310.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
gi|441486931|gb|AGC43626.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
Length = 206
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG V +I+A+ L+L+ ED +K I +Y+NS G +
Sbjct: 21 DIYSRLLKDRIIMLGTEIDDDVANVIVAQLLFLESEDPDKDINIYINSPGGS 72
>gi|16331162|ref|NP_441890.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|383322904|ref|YP_005383757.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|383326073|ref|YP_005386926.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|383491957|ref|YP_005409633.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|384437225|ref|YP_005651949.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|451815318|ref|YP_007451770.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|3023511|sp|P74467.1|CLPP3_SYNY3 RecName: Full=Probable ATP-dependent Clp protease proteolytic
subunit 3; AltName: Full=Endopeptidase Clp 3
gi|1653656|dbj|BAA18568.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|339274257|dbj|BAK50744.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|359272223|dbj|BAL29742.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|359275393|dbj|BAL32911.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|359278563|dbj|BAL36080.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|407961461|dbj|BAM54701.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BEST7613]
gi|451781287|gb|AGF52256.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
Length = 202
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ + L + RI++LG S+ I+A LYL +D KPIYLY+NS G +
Sbjct: 22 DIYTRLSQERIIFLGQEVNDSIANRIVAFLLYLDSDDPSKPIYLYINSPGGS 73
>gi|444912991|ref|ZP_21233148.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter
fuscus DSM 2262]
gi|444716404|gb|ELW57255.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter
fuscus DSM 2262]
Length = 205
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV LG V +I+++ L+L+ ED +K I LY+NS G +
Sbjct: 21 DIYSRLLKDRIVMLGTEIDDDVANVIVSQLLFLESEDPDKDINLYINSPGGS 72
>gi|113952713|ref|YP_729943.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9311]
gi|113880064|gb|ABI45022.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. CC9311]
Length = 200
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ + L RI++LG V ++A+ LYL ED+ KPIYLY+NS G +
Sbjct: 22 DIYTRLGVERILFLGQDVNDGVANSLVAQMLYLDSEDSSKPIYLYINSPGGS 73
>gi|87123284|ref|ZP_01079135.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. RS9917]
gi|86169004|gb|EAQ70260.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. RS9917]
Length = 199
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG V + ++A+ L+L+ ED EK I +Y+NS G +
Sbjct: 16 DIYSRLLRERIIFLGTGIDDQVADALVAQLLFLEAEDPEKEIQIYINSPGGS 67
>gi|335038541|ref|ZP_08531774.1| ATP-dependent Clp protease proteolytic subunit
[Caldalkalibacillus thermarum TA2.A1]
gi|334181561|gb|EGL84093.1| ATP-dependent Clp protease proteolytic subunit
[Caldalkalibacillus thermarum TA2.A1]
Length = 196
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG V ++A+ L+L ED EK I LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGTPIDDQVANAVVAQLLFLAAEDPEKDISLYINSPGGS 70
>gi|283797647|ref|ZP_06346800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. M62/1]
gi|291074652|gb|EFE12016.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium sp. M62/1]
gi|295092868|emb|CBK78975.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
cf. saccharolyticum K10]
gi|295114657|emb|CBL35504.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[butyrate-producing bacterium SM4/1]
Length = 193
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K RIV+LG LI+A+ L+L+ ED K I+LY+NS G +
Sbjct: 19 DIFSRLLKERIVFLGEEVTDVSASLIVAQLLFLESEDPNKDIHLYINSPGGS 70
>gi|225378750|ref|ZP_03755971.1| hypothetical protein ROSEINA2194_04420 [Roseburia inulinivorans
DSM 16841]
gi|225209409|gb|EEG91763.1| hypothetical protein ROSEINA2194_04420 [Roseburia inulinivorans
DSM 16841]
Length = 202
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG + L++A+ L+L+ ED K I+LY+NS G
Sbjct: 28 DIYSRLLKDRIIFLGEEVNETTASLVVAQLLFLESEDPGKDIHLYINSPG 77
>gi|261415786|ref|YP_003249469.1| endopeptidase Clp [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|385790679|ref|YP_005821802.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261372242|gb|ACX74987.1| Endopeptidase Clp [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302326653|gb|ADL25854.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 196
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RI++LG V ++A+ ++L+YE+ EK I LY+NS G
Sbjct: 18 DIYSRLLKERIIFLGTPINDEVANNVMAQLIFLEYENPEKDITLYINSPG 67
>gi|159903903|ref|YP_001551247.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9211]
gi|159889079|gb|ABX09293.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
MIT 9211]
Length = 223
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ + L RI++LG V ++A+ LYL ED+ KPIYLY+NS G +
Sbjct: 45 DIYTRLGAERILFLGQEVNDGVANSLVAQMLYLDSEDSTKPIYLYINSPGGS 96
>gi|124021784|ref|YP_001016091.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
MIT 9303]
gi|123962070|gb|ABM76826.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
MIT 9303]
Length = 224
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG V + ++A+ L+L+ ED EK I +Y+NS G +
Sbjct: 41 DIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDPEKDIQIYINSPGGS 92
>gi|350425874|ref|XP_003494260.1| PREDICTED: hypothetical protein LOC100749102 [Bombus impatiens]
Length = 2402
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K R+++L ++ LI+A+ L+L+ E+ EK IYLY+NS G
Sbjct: 454 DIYSRLLKERVIFLNGQVEDNMANLIVAQMLFLEAENPEKDIYLYINSPG 503
>gi|23099911|ref|NP_693377.1| ATP-dependent Clp protease proteolytic subunit [Oceanobacillus
iheyensis HTE831]
gi|60389793|sp|Q8ENM5.1|CLPP_OCEIH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|22778142|dbj|BAC14412.1| ATP-dependent Clp protease proteolytic subunit [Oceanobacillus
iheyensis HTE831]
Length = 193
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG +V I+A+ L+L+ ED +K I LY+NS G +
Sbjct: 19 DIYSRLLKDRIILLGSGIDDNVSNSIVAQLLFLEAEDPDKDISLYINSPGGS 70
>gi|124007704|ref|ZP_01692407.1| Clp protease [Microscilla marina ATCC 23134]
gi|123986826|gb|EAY26598.1| Clp protease [Microscilla marina ATCC 23134]
Length = 195
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 14 PPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
P D+ S L +RI++LG + +V +I A+ L+L+ DA+K I LY+NS G +
Sbjct: 15 PIDVFSRLISDRIIFLGTAVDDNVANVITAQLLFLESVDAKKDILLYINSPGGS 68
>gi|156743343|ref|YP_001433472.1| endopeptidase Clp [Roseiflexus castenholzii DSM 13941]
gi|156234671|gb|ABU59454.1| Endopeptidase Clp [Roseiflexus castenholzii DSM 13941]
Length = 203
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
DL S L + RI+ LG V LI+A+ LYLQ+ D ++ I+ Y+NS G +
Sbjct: 21 DLFSRLLQERIILLGTPIDDEVASLIVAQLLYLQHTDPDRDIWFYINSPGGS 72
>gi|261883798|ref|ZP_06007837.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
fetus subsp. venerealis str. Azul-94]
Length = 85
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
T+ + D+ S L K+RI+ L ++ I+A+ L+L+ ED +K IYLY+NSTG
Sbjct: 12 TSKGERSYDIYSRLLKDRIIMLSGEIEDAMASAIVAQMLFLEAEDPDKDIYLYINSTGGV 71
Query: 68 EVGSF 72
F
Sbjct: 72 VTSGF 76
>gi|255030442|ref|ZP_05302393.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes LO28]
Length = 146
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+++ L+L +D EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGS 70
>gi|255018646|ref|ZP_05290772.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL F2-515]
Length = 161
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+++ L+L +D EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGS 70
>gi|392530253|ref|ZP_10277390.1| ATP-dependent Clp protease proteolytic subunit [Carnobacterium
maltaromaticum ATCC 35586]
Length = 198
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ L + +V ++A+ L+L +D+EK IY+Y+NS G +
Sbjct: 19 DIYSRLLKDRIIMLSGAIDDNVANAVIAQLLFLDAQDSEKDIYIYINSPGGS 70
>gi|193214418|ref|YP_001995617.1| endopeptidase Clp [Chloroherpeton thalassium ATCC 35110]
gi|193087895|gb|ACF13170.1| Endopeptidase Clp [Chloroherpeton thalassium ATCC 35110]
Length = 226
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG LI+A+ +YL+ ED E+ I++Y+NS G +
Sbjct: 45 DIFSRLLRERIIFLGTPIDDHSASLIMAQLIYLESEDPERDIFMYINSPGGS 96
>gi|428770773|ref|YP_007162563.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cyanobacterium aponinum PCC 10605]
gi|428685052|gb|AFZ54519.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cyanobacterium aponinum PCC 10605]
Length = 196
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG + ++A+ L L+ ED EK IYLY+NS G +
Sbjct: 17 DIYSRLLRERIIFLGQQVTDELANSLVAQLLLLEAEDPEKDIYLYINSPGGS 68
>gi|414084879|ref|YP_006993590.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Carnobacterium maltaromaticum LMA28]
gi|412998466|emb|CCO12275.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Carnobacterium maltaromaticum LMA28]
Length = 198
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ L + +V ++A+ L+L +D+EK IY+Y+NS G +
Sbjct: 19 DIYSRLLKDRIIMLSGAIDDNVANAVIAQLLFLDAQDSEKDIYIYINSPGGS 70
>gi|363890989|ref|ZP_09318283.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium CM5]
gi|363893165|ref|ZP_09320304.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium CM2]
gi|363895295|ref|ZP_09322293.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium ACC19a]
gi|402838212|ref|ZP_10886724.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacteriaceae bacterium OBRC8]
gi|361957733|gb|EHL11038.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium ACC19a]
gi|361961689|gb|EHL14872.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium CM2]
gi|361962756|gb|EHL15865.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium CM5]
gi|402273716|gb|EJU22911.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacteriaceae bacterium OBRC8]
Length = 200
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG L++A+ L+L+ ED +K I LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGDEVNDQTASLVVAQLLFLESEDPDKDISLYINSPGGS 70
>gi|328767510|gb|EGF77559.1| hypothetical protein BATDEDRAFT_91564 [Batrachochytrium
dendrobatidis JAM81]
Length = 251
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K RIV L SV +I+A+ L+L+ E+ EKPI Y+NS G
Sbjct: 36 DIFSRLLKERIVMLNGEVDDSVSAIIVAQLLFLEAENPEKPISFYINSPG 85
>gi|317495864|ref|ZP_07954227.1| Clp protease [Gemella morbillorum M424]
gi|316914041|gb|EFV35524.1| Clp protease [Gemella morbillorum M424]
Length = 212
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
T+ + D+ S L K+RI+ LG V I ++ L+L+ +D+EK IY Y+NS G +
Sbjct: 11 TSQGERAYDIYSRLLKDRIIILGSDVNDQVANSITSQLLFLEAQDSEKDIYFYINSPGGS 70
Query: 68 EVGSF 72
F
Sbjct: 71 VTAGF 75
>gi|147677139|ref|YP_001211354.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
gi|259585961|sp|A5D447.1|CLPP_PELTS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146273236|dbj|BAF58985.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
Length = 194
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG + LI+A+ L+L+ ED EK I Y+NS G
Sbjct: 19 DIYSRLLKDRIIFLGGPIDDNTANLIIAQMLFLEAEDPEKDIQFYINSPG 68
>gi|427703523|ref|YP_007046745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium
gracile PCC 6307]
gi|427346691|gb|AFY29404.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium
gracile PCC 6307]
Length = 249
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG V + ++A+ L+L+ ED EK I +Y+NS G +
Sbjct: 69 DIYSRLLRERIIFLGTGIDDQVADSLVAQLLFLEAEDPEKDIQIYINSPGGS 120
>gi|37523336|ref|NP_926713.1| ATP-dependent Clp protease-like protein [Gloeobacter violaceus
PCC 7421]
gi|81708690|sp|Q7NEW1.1|CLPP2_GLOVI RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|35214340|dbj|BAC91708.1| clpP [Gloeobacter violaceus PCC 7421]
Length = 218
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 25 RIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
RIVYLG V EL++A+ LYL+ ED KPI +Y+NS G
Sbjct: 37 RIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINSPG 77
>gi|33862335|ref|NP_893895.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
MIT 9313]
gi|67460519|sp|Q7V992.1|CLPP1_PROMM RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|33640448|emb|CAE20237.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
MIT 9313]
Length = 224
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG V + ++A+ L+L+ ED EK I +Y+NS G +
Sbjct: 41 DIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDPEKDIQIYINSPGGS 92
>gi|354580806|ref|ZP_08999711.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus lactis 154]
gi|353203237|gb|EHB68686.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Paenibacillus lactis 154]
Length = 193
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 1 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYL 59
VIP+ T+ + D+ S L K+RI+++G + +V ++A+ L+L ED ++ I++
Sbjct: 3 VIPYVVEQTSRGERSYDIYSRLLKDRIIFVGAAIDDAVANSVIAQLLFLAAEDPDRDIHM 62
Query: 60 YLNSTGTTEVGSF 72
Y+NS G + F
Sbjct: 63 YINSPGGSVSAGF 75
>gi|323456646|gb|EGB12512.1| hypothetical protein AURANDRAFT_70482, partial [Aureococcus
anophagefferens]
Length = 1031
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
++P +G EQ D+ S L K+RI+ LG V +++A+ LYL ED E I LY
Sbjct: 57 IMPTVTGANGEQI--DVVSRLLKDRILLLGSEVNDEVANVLVAQMLYLANEDPEGDITLY 114
Query: 61 LNSTG 65
+NS G
Sbjct: 115 INSPG 119
>gi|376403584|ref|YP_005089857.1| clpP gene product (chloroplast) [Pedinomonas minor]
gi|229915491|gb|ACQ90835.1| proteolytic subunit 2 of clp protease [Pedinomonas minor]
Length = 199
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 2 IPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYL 61
+P SG W DL + +Y+ R+++ ++ LYL EDA KP+Y+Y+
Sbjct: 12 MPGESGAQW----VDLYNRMYRERVLFFCQELDDEFANQLIGIMLYLNAEDANKPLYIYI 67
Query: 62 NSTGTTEVGSFLCHALVF 79
NS G GS C V+
Sbjct: 68 NSPG----GSVTCGIAVY 81
>gi|269792564|ref|YP_003317468.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100199|gb|ACZ19186.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 199
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+++G + L++A+ L+L+ ED +K +++Y+NS G
Sbjct: 25 DIYSRLLKDRIIFIGQEIDDHLSNLVVAQLLFLESEDPDKDVFVYINSPG 74
>gi|16332068|ref|NP_442796.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|451816220|ref|YP_007452672.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|2493737|sp|Q59993.1|CLPP2_SYNY3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|1001377|dbj|BAA10867.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|407960292|dbj|BAM53532.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|451782189|gb|AGF53158.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
Length = 226
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG V + I+A+ L+L ED EK I LY+NS G +
Sbjct: 39 DIYSRLLRERIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGS 90
>gi|77455725|gb|ABA86601.1| chloroplast clp protease P [Isochrysis galbana]
Length = 277
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+ LG V L++A+ LYL EDA K I +Y+NS G
Sbjct: 89 DVMSRLLKDRILLLGQGVDDEVANLLVAQLLYLANEDARKDITMYINSPG 138
>gi|254446451|ref|ZP_05059927.1| Clp protease [Verrucomicrobiae bacterium DG1235]
gi|198260759|gb|EDY85067.1| Clp protease [Verrucomicrobiae bacterium DG1235]
Length = 182
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV++G + I+A+ L+LQ ED +K I +Y+NS G +
Sbjct: 2 DIYSRLLKDRIVFIGTPINDEIANAIIAQLLFLQMEDPKKDINVYINSPGGS 53
>gi|254432163|ref|ZP_05045866.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium
sp. PCC 7001]
gi|197626616|gb|EDY39175.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium
sp. PCC 7001]
Length = 196
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG I+A+ L+L+ ED EK I+LY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGEPVTAESANRIVAQLLFLEAEDPEKDIFLYINSPGGS 68
>gi|434393186|ref|YP_007128133.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa
sp. PCC 7428]
gi|428265027|gb|AFZ30973.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa
sp. PCC 7428]
Length = 197
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ + LY+ RI++LG + I+A LYL ED K IYLY+NS G
Sbjct: 22 DIYNRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPG 71
>gi|406882489|gb|EKD30274.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium (gcode 4)]
Length = 207
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L ++R+V+LG + SV ++A+ LYL+ +D + PI +Y+NS G
Sbjct: 33 DIYSRLLEDRVVFLGDAIDASVANTVIAQLLYLEKQDPKAPITIYVNSPG 82
>gi|390941424|ref|YP_006405161.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Sulfurospirillum barnesii SES-3]
gi|390194531|gb|AFL69586.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Sulfurospirillum barnesii SES-3]
Length = 196
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ L +V I+A+ L+L+ ED EK IYLY+NS G F
Sbjct: 20 DIYSRLLKDRIIMLSGEINDAVASSIVAQLLFLEAEDPEKDIYLYINSPGGVITSGF 76
>gi|383323811|ref|YP_005384665.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|383326980|ref|YP_005387834.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|383492864|ref|YP_005410541.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|384438132|ref|YP_005652857.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|339275165|dbj|BAK51652.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|359273131|dbj|BAL30650.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|359276301|dbj|BAL33819.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|359279471|dbj|BAL36988.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
Length = 201
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG V + I+A+ L+L ED EK I LY+NS G +
Sbjct: 14 DIYSRLLRERIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGS 65
>gi|291518668|emb|CBK73889.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Butyrivibrio fibrisolvens 16/4]
Length = 194
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV+LG + L +A+ L+L+ ED K I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIVFLGEEVNETTASLTVAQLLFLESEDPSKDIHLYINSPGGS 70
>gi|72382719|ref|YP_292074.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. NATL2A]
gi|124026440|ref|YP_001015555.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. NATL1A]
gi|115311347|sp|Q46JF7.1|CLPP2_PROMT RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|72002569|gb|AAZ58371.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. NATL2A]
gi|123961508|gb|ABM76291.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
Length = 200
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ + L RI++LG + ++A+ LYL ED+ KPIYLY+NS G +
Sbjct: 22 DIYTRLGAERILFLGQEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGS 73
>gi|119510658|ref|ZP_01629787.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414]
gi|119464709|gb|EAW45617.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414]
Length = 210
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG +V I+A+ L+L ED+EK I +Y+NS G +
Sbjct: 23 DIYSRLLRERIIFLGTPIDDTVANSIVAQLLFLDAEDSEKDIQIYINSPGGS 74
>gi|381184071|ref|ZP_09892741.1| ATP-dependent Clp protease proteolytic subunit [Listeriaceae
bacterium TTU M1-001]
gi|380316031|gb|EIA19480.1| ATP-dependent Clp protease proteolytic subunit [Listeriaceae
bacterium TTU M1-001]
Length = 197
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+++ L+L +D EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGS 70
>gi|421872665|ref|ZP_16304283.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Brevibacillus laterosporus GI-9]
gi|372458638|emb|CCF13832.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Brevibacillus laterosporus GI-9]
Length = 193
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG V ++A+ L+LQ ED +K I +Y+NS G +
Sbjct: 19 DIYSRLLKDRIIFLGTPINDQVANSVVAQLLFLQAEDPDKDISIYINSPGGS 70
>gi|339007073|ref|ZP_08639648.1| ATP-dependent Clp protease proteolytic subunit 1 [Brevibacillus
laterosporus LMG 15441]
gi|338776282|gb|EGP35810.1| ATP-dependent Clp protease proteolytic subunit 1 [Brevibacillus
laterosporus LMG 15441]
Length = 195
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++LG V ++A+ L+LQ ED +K I +Y+NS G +
Sbjct: 21 DIYSRLLKDRIIFLGTPINDQVANSVVAQLLFLQAEDPDKDISIYINSPGGS 72
>gi|169334562|ref|ZP_02861755.1| hypothetical protein ANASTE_00965 [Anaerofustis stercorihominis
DSM 17244]
gi|169259279|gb|EDS73245.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerofustis stercorihominis DSM 17244]
Length = 193
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI++L V L++AE L+L+ +++EK I LY+NS G +
Sbjct: 19 DIYSRLLKDRIIFLSGEINDDVANLVVAEMLFLESQNSEKDIQLYINSPGGS 70
>gi|186681335|ref|YP_001864531.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
gi|186463787|gb|ACC79588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
Length = 232
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG +V I+A+ L+L ED+EK I +Y+NS G +
Sbjct: 45 DIYSRLLRERIIFLGTPIDDAVANSIVAQLLFLDSEDSEKDIQMYVNSPGGS 96
>gi|354567676|ref|ZP_08986844.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
gi|353542134|gb|EHC11598.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
Length = 231
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RI++LG +V I+A+ L+L ED EK I LY+NS G +
Sbjct: 44 DIYSRLLRERIIFLGTPIDDTVANSIVAQLLFLDAEDPEKDIQLYINSPGGS 95
>gi|329767857|ref|ZP_08259372.1| ATP-dependent Clp protease proteolytic subunit [Gemella
haemolysans M341]
gi|328838776|gb|EGF88373.1| ATP-dependent Clp protease proteolytic subunit [Gemella
haemolysans M341]
Length = 215
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSF 72
D+ S L K+RI+ LG V I ++ L+L+ +D+EK IY Y+NS G + F
Sbjct: 19 DIYSRLLKDRIIILGSDVNDQVANSITSQLLFLEAQDSEKDIYFYINSPGGSVTAGF 75
>gi|332686182|ref|YP_004455956.1| ATP-dependent Clp protease proteolytic subunit [Melissococcus
plutonius ATCC 35311]
gi|379727776|ref|YP_005319961.1| ATP-dependent Clp protease proteolytic subunit [Melissococcus
plutonius DAT561]
gi|332370191|dbj|BAK21147.1| ATP-dependent Clp protease proteolytic subunit [Melissococcus
plutonius ATCC 35311]
gi|376318679|dbj|BAL62466.1| ATP-dependent Clp protease proteolytic subunit [Melissococcus
plutonius DAT561]
Length = 198
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RIV L +V ++A+ L+L +D+EK IYLY+NS G +
Sbjct: 19 DIYSRLLKDRIVMLSGPIDDNVSNSVIAQLLFLDAQDSEKDIYLYINSPGGS 70
>gi|218439262|ref|YP_002377591.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
PCC 7424]
gi|218171990|gb|ACK70723.1| Endopeptidase Clp [Cyanothece sp. PCC 7424]
Length = 199
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ + L + RI++LG + I+A LYL ED KPIYLY+NS G +
Sbjct: 22 DIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSEDPNKPIYLYINSPGGS 73
>gi|412990690|emb|CCO18062.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bathycoccus
prasinos]
Length = 250
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 1 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
V+P G+ + DL ++L NRIV++G +I+A+ L L+ E +PI LY
Sbjct: 67 VVPLGDGSQQQ----DLFTFLVNNRIVFIGERIDEDSTAIIVAQMLALESEAPNEPITLY 122
Query: 61 LNSTGTTE 68
+N+T T+
Sbjct: 123 INATAGTQ 130
>gi|345023014|ref|ZP_08786627.1| ATP-dependent Clp protease proteolytic subunit [Ornithinibacillus
scapharcae TW25]
Length = 195
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+A+ L+L+ ED+ K I LY+NS G +
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLEAEDSGKDISLYINSPGGS 70
>gi|333371917|ref|ZP_08463857.1| ATP-dependent Clp protease, protease subunit [Desmospora sp.
8437]
gi|332975388|gb|EGK12282.1| ATP-dependent Clp protease, protease subunit [Desmospora sp.
8437]
Length = 192
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RIV+LG S ++ I+A+ L+L +D++K I+LY++S G
Sbjct: 20 DIYSRLLKDRIVFLGGSIDEALAHSIVAQLLFLASDDSDKDIHLYIHSPG 69
>gi|119716961|ref|YP_923926.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nocardioides
sp. JS614]
gi|119537622|gb|ABL82239.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nocardioides
sp. JS614]
Length = 200
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
TA + D+ S L +RIVY+G V +++A+ L+L+ + ++PI LYLNS G
Sbjct: 13 TARGERAVDIYSRLLTDRIVYVGTEIDDGVANVVIAQLLHLESDAPDQPISLYLNSPG 70
>gi|380302790|ref|ZP_09852483.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Brachybacterium squillarum M-6-3]
Length = 196
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L +RIVYLG V ++A+ L+L+ + ++PI LYLNS G H
Sbjct: 22 DIFSRLLSDRIVYLGTGIDDGVANTVIAQVLHLENDAPDRPIQLYLNSEGGDAQAVLAIH 81
Query: 76 -ALVFFQ 81
AL + +
Sbjct: 82 DALAYVR 88
>gi|297621812|ref|YP_003709949.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Waddlia
chondrophila WSU 86-1044]
gi|297377113|gb|ADI38943.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Waddlia
chondrophila WSU 86-1044]
gi|337294078|emb|CCB92063.1| ATP-dependent Clp protease proteolytic subunit 2 [Waddlia
chondrophila 2032/99]
Length = 215
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RIV++G V +++A+ L+L+ ED +K + +Y+NS G
Sbjct: 35 DIFSRLLKDRIVFIGQDIDDHVANIVVAQLLFLRMEDPKKDVNIYVNSRG 84
>gi|241888864|ref|ZP_04776170.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gemella
haemolysans ATCC 10379]
gi|241864540|gb|EER68916.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gemella
haemolysans ATCC 10379]
Length = 215
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 8 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
T+ + D+ S L K+RI+ LG V I ++ L+L+ +D+EK IY Y+NS G +
Sbjct: 11 TSQGERAYDIYSRLLKDRIIILGSDVNDQVANSITSQLLFLEAQDSEKDIYFYINSPGGS 70
Query: 68 EVGSF 72
F
Sbjct: 71 VTAGF 75
>gi|307152499|ref|YP_003887883.1| endopeptidase Clp [Cyanothece sp. PCC 7822]
gi|306982727|gb|ADN14608.1| Endopeptidase Clp [Cyanothece sp. PCC 7822]
Length = 199
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ + L + RI++LG + I+A LYL ED KPIYLY+NS G +
Sbjct: 22 DIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSEDPNKPIYLYINSPGGS 73
>gi|315283588|ref|ZP_07871740.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
marthii FSL S4-120]
gi|313612769|gb|EFR86759.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
marthii FSL S4-120]
Length = 198
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+++ L+L +D EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGS 70
>gi|374312107|ref|YP_005058537.1| endopeptidase Clp [Granulicella mallensis MP5ACTX8]
gi|358754117|gb|AEU37507.1| Endopeptidase Clp [Granulicella mallensis MP5ACTX8]
Length = 191
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L ++ I++LG +V LI+A+ L+L ED EK I LY+NS G +
Sbjct: 14 DIYSRLLRDNIIFLGTPIDDNVANLIIAQMLFLSGEDPEKDIQLYINSPGGS 65
>gi|219820815|gb|ACL37528.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820817|gb|ACL37529.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820819|gb|ACL37530.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820821|gb|ACL37531.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820823|gb|ACL37532.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820825|gb|ACL37533.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820827|gb|ACL37534.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820829|gb|ACL37535.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820831|gb|ACL37536.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820833|gb|ACL37537.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820835|gb|ACL37538.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820837|gb|ACL37539.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820839|gb|ACL37540.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820841|gb|ACL37541.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820843|gb|ACL37542.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820845|gb|ACL37543.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820847|gb|ACL37544.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820849|gb|ACL37545.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820851|gb|ACL37546.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820853|gb|ACL37547.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
Length = 151
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+++ L+L +D EK I+LY+NS G +
Sbjct: 6 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGS 57
>gi|170086161|ref|XP_001874304.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651856|gb|EDR16096.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 243
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + R++ L + S LI+A+ L+L+ ED+ KPI+LY+NS G +
Sbjct: 60 DIFSRLLRERVIMLHGTIRDSDSTLIVAQLLFLEAEDSTKPIHLYINSPGGS 111
>gi|317970010|ref|ZP_07971400.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CB0205]
Length = 196
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L + RIV+LG I+A+ L+L+ ED EK I+LY+NS G +
Sbjct: 17 DIYSRLLRERIVFLGEPVTSESANRIVAQLLFLEAEDPEKDIFLYINSPGGS 68
>gi|410459040|ref|ZP_11312794.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
azotoformans LMG 9581]
gi|409930746|gb|EKN67741.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
azotoformans LMG 9581]
Length = 198
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI+ LG + +V I+A+ L+L ED +K I LY+NS G
Sbjct: 19 DIYSRLLKDRIIMLGTAIDDTVANSIVAQLLFLAAEDPDKDISLYINSPG 68
>gi|381211603|ref|ZP_09918674.1| ATP-dependent Clp protease proteolytic subunit [Lentibacillus sp.
Grbi]
Length = 197
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG +V I+A+ L+L+ ED +K I LY+NS G +
Sbjct: 19 DIYSRLLKDRIIMLGSGIDDNVANSIVAQLLFLEAEDPDKDISLYINSPGGS 70
>gi|422420028|ref|ZP_16496983.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
seeligeri FSL N1-067]
gi|422423177|ref|ZP_16500130.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
seeligeri FSL S4-171]
gi|313632032|gb|EFR99140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
seeligeri FSL N1-067]
gi|313636395|gb|EFS02167.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
seeligeri FSL S4-171]
Length = 198
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+++ L+L +D EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGS 70
>gi|315304656|ref|ZP_07874875.1| ATP-dependent Clp protease, proteolytic subunit ClpP, partial
[Listeria ivanovii FSL F6-596]
gi|313626974|gb|EFR95888.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
ivanovii FSL F6-596]
Length = 191
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+++ L+L +D EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGS 70
>gi|255027871|ref|ZP_05299857.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J2-003]
Length = 167
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+++ L+L +D EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGS 70
>gi|217963429|ref|YP_002349107.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes HCC23]
gi|290893656|ref|ZP_06556637.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J2-071]
gi|386009186|ref|YP_005927464.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes L99]
gi|386027798|ref|YP_005948574.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes M7]
gi|404408843|ref|YP_006691558.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes SLCC2376]
gi|422810498|ref|ZP_16858909.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes FSL J1-208]
gi|217332699|gb|ACK38493.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes HCC23]
gi|290556729|gb|EFD90262.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J2-071]
gi|307571996|emb|CAR85175.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes L99]
gi|336024379|gb|AEH93516.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes M7]
gi|378751388|gb|EHY61978.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes FSL J1-208]
gi|404242992|emb|CBY64392.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes SLCC2376]
Length = 198
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+++ L+L +D EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGS 70
>gi|116622996|ref|YP_825152.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Solibacter usitatus Ellin6076]
gi|116226158|gb|ABJ84867.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Solibacter usitatus Ellin6076]
Length = 206
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNS-TGTTEVGSFLC 74
D+ S L K I++LG V LI+A+ L+L+ ED EK I +Y+NS G+ G +
Sbjct: 22 DIYSRLLKENIIFLGTPIDDQVANLIIAQLLFLEAEDPEKDISIYVNSPGGSITAGLAIL 81
Query: 75 HALVFFQ 81
+ F +
Sbjct: 82 DTMAFIR 88
>gi|429123916|ref|ZP_19184448.1| ATP-dependent Clp protease proteolytic subunit [Brachyspira
hampsonii 30446]
gi|426280077|gb|EKV57095.1| ATP-dependent Clp protease proteolytic subunit [Brachyspira
hampsonii 30446]
Length = 193
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTG 65
D+ S L K+RI++LG V +++A+ L+L+ D EK I LY+NS G
Sbjct: 18 DIYSRLLKDRIIFLGGEINDDVANIVIAQLLFLESADPEKDISLYINSPG 67
>gi|16801674|ref|NP_471942.1| ATP-dependent Clp protease proteolytic subunit [Listeria innocua
Clip11262]
gi|422416950|ref|ZP_16493907.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
innocua FSL J1-023]
gi|423100882|ref|ZP_17088588.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Listeria innocua ATCC 33091]
gi|20137847|sp|Q928C4.1|CLPP_LISIN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|16415149|emb|CAC97839.1| ATP-dependent Clp protease proteolytic subunit [Listeria innocua
Clip11262]
gi|313622455|gb|EFR92900.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
innocua FSL J1-023]
gi|370792688|gb|EHN60544.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Listeria innocua ATCC 33091]
Length = 198
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+++ L+L +D EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGS 70
>gi|262198158|ref|YP_003269367.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haliangium
ochraceum DSM 14365]
gi|262081505|gb|ACY17474.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haliangium
ochraceum DSM 14365]
Length = 207
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K IV+LG +V +I+A+ L+L+ ED EK I LY+NS G +
Sbjct: 27 DIFSRLLKEGIVFLGTPVDDAVANVIIAQLLHLESEDPEKDIMLYINSPGGS 78
>gi|116873833|ref|YP_850614.1| ATP-dependent Clp protease proteolytic subunit [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|116742711|emb|CAK21835.1| ATP-dependent Clp protease proteolytic subunit [Listeria
welshimeri serovar 6b str. SLCC5334]
Length = 198
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+++ L+L +D EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGS 70
>gi|374321531|ref|YP_005074660.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
terrae HPL-003]
gi|357200540|gb|AET58437.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
terrae HPL-003]
Length = 198
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTTEVGSFLCH 75
D+ S L K+RI+ LG V I+A+ L+L ED EK I+LY+NS G GS
Sbjct: 19 DIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYVNSPG----GSITAG 74
Query: 76 ALVF 79
+F
Sbjct: 75 MAIF 78
>gi|347549771|ref|YP_004856099.1| ATP-dependent Clp protease proteolytic subunit [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346982842|emb|CBW86873.1| Putative ATP-dependent Clp protease proteolytic subunit [Listeria
ivanovii subsp. ivanovii PAM 55]
Length = 198
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+++ L+L +D EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGS 70
>gi|315453779|ref|YP_004074049.1| ATP-dependent clp protease proteolytic subunit [Helicobacter
felis ATCC 49179]
gi|315132831|emb|CBY83459.1| ATP-dependent clp protease proteolytic subunit [Helicobacter
felis ATCC 49179]
Length = 197
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 2 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLY 60
IPF T + D+ S L K+RIV L +V I+A+ L+L+ ED EK I LY
Sbjct: 4 IPFVIEKTGRGERSYDIYSRLLKDRIVLLSGEINDAVASSIVAQLLFLEAEDPEKDINLY 63
Query: 61 LNSTGTTEVGSF 72
+NS G + F
Sbjct: 64 INSPGGSVTSGF 75
>gi|289435727|ref|YP_003465599.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|289171971|emb|CBH28517.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
seeligeri serovar 1/2b str. SLCC3954]
Length = 198
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 DLASYLYKNRIVYLGMSFVPSVRELILAEFLYLQYEDAEKPIYLYLNSTGTT 67
D+ S L K+RI+ LG + +V I+++ L+L +D EK I+LY+NS G +
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGS 70
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.139 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,513,991,796
Number of Sequences: 23463169
Number of extensions: 55399721
Number of successful extensions: 134778
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4615
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 130072
Number of HSP's gapped (non-prelim): 4718
length of query: 92
length of database: 8,064,228,071
effective HSP length: 62
effective length of query: 30
effective length of database: 6,609,511,593
effective search space: 198285347790
effective search space used: 198285347790
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 69 (31.2 bits)